BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007329
(608 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/598 (69%), Positives = 487/598 (81%), Gaps = 8/598 (1%)
Query: 3 MAFCAKTSQTPLRQNLRNP---KTRIPET-SFYFKPKTRHFSSKNAQSVQVLNTQNTSSI 58
MA AK L+ NL NP KT P+ +F +TR S + + VLN SSI
Sbjct: 1 MAVSAKIPAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNP---SSI 57
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+NPNS + ELCL G LE+AL +LDSMQEL + V+E+ + L+RLCEWKR EG +H
Sbjct: 58 TAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVH 117
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
S VSKT++ L VRLGNA LSMFV+FGDL AWYVFGKM +RDLFSWNVL+GGYAKAG+FD
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD 177
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EAL+LY RM WVG ++PDVYTFPCVLRTCGG+PDL RG+EVH+HVIR+G+E+DVDVVNAL
Sbjct: 178 EALNLYHRMLWVG-IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
ITMYVKCGD+ ARLVFD MP+RDRISWNAMISGYFEN ++GL LF MMRE VDPD
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDL 296
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
MT++SVISA E +GDE+LGREVHGYVIK GF +VSV N LI+M+ S G +E E VFS+
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
ME KD+VSWT MIS YE + LP+KAVETY +ME EG +PDEITIASVLSACA LG LD G
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
I LH+ A RTGL SY+I+AN+LIDMYSKC+CIDKALEVFH+IP+KNVISWTSIILGLRLN
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
RSFEAL FF++M+L+LKPNSVTLVS+LSACARIGAL CGKEIHAHALR G+ FDGFLPN
Sbjct: 477 YRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
ALLDMYVRCGRM+PAWNQFNS E+DV++WNILLTGYA++G+G LA E F KMI+S N
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 18/416 (4%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
N++CL G L+ M+E + D + +++ CE G +H V KT
Sbjct: 274 NDVCLEG-----LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V + N+ + M G A VF KM +DL SW +I GY K G ++A+ Y M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV PD T VL C G+ L +G +H R G + V V N+LI MY KC
Sbjct: 389 EH-EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ +A VF +P ++ ISW ++I G N + L F M L P+ +TL SV+SA
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL-KPNSVTLVSVLSA 506
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G G+E+H + ++ G D + N L+ MY+ G E F+ E KDV SW
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASW 565
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-----H 422
+++ Y AVE + M PDEIT S+L AC+ G + G++ H
Sbjct: 566 NILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEH 625
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + L Y +++D+ + ++ A E ++P D + W +++ R+
Sbjct: 626 KFHIAPNLKHYA----SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/598 (69%), Positives = 487/598 (81%), Gaps = 8/598 (1%)
Query: 3 MAFCAKTSQTPLRQNLRNP---KTRIPET-SFYFKPKTRHFSSKNAQSVQVLNTQNTSSI 58
MA AK L+ NL NP KT P+ +F +TR S + + VLN SSI
Sbjct: 1 MAVSAKIPAIHLQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNP---SSI 57
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+NPNS + ELCL G LE+AL +LDSMQEL + V+E+ + L+RLCEWKR EG +H
Sbjct: 58 TAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVH 117
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
S VSKT++ L VRLGNA LSMFV+FGDL AWYVFGKM +RDLFSWNVL+GGYAKAG+FD
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD 177
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EAL+LY RM WVG ++PDVYTFPCVLRTCGG+PDL RG+EVH+HVIR+G+E+DVDVVNAL
Sbjct: 178 EALNLYHRMLWVG-IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
ITMYVKCGD+ ARLVFD MP+RDRISWNAMISGYFEN ++GL LF MMRE VDPD
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDL 296
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
MT++SVISA E +GDE+LGREVHGYVIK GF +VSV N LI+M+ S G +E E VFS+
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
ME KD+VSWT MIS YE + LP+KAVETY +ME EG +PDEITIASVLSACA LG LD G
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG 416
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
I LH+ A RTGL SY+I+AN+LIDMYSKC+CIDKALEVFH+IP+KNVISWTSIILGLRLN
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
RSFEAL FF++M+L+LKPNSVTLVS+LSACARIGAL CGKEIHAHALR G+ FDGFLPN
Sbjct: 477 YRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
ALLDMYVRCGRM+PAWNQFNS E+DV++WNILLTGYA++G+G LA E F KMI+S N
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVN 594
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 194/416 (46%), Gaps = 18/416 (4%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
N++CL G L+ M+E + D + +++ CE G +H V KT
Sbjct: 274 NDVCLEG-----LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V + N+ + M G A VF KM +DL SW +I GY K G ++A+ Y M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV PD T VL C G+ L +G +H R G + V V N+LI MY KC
Sbjct: 389 EH-EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ +A VF +P ++ ISW ++I G N + L F M L P+ +TL SV+SA
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL-KPNSVTLVSVLSA 506
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G G+E+H + ++ G D + N L+ MY+ G E F+ E KDV SW
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASW 565
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-----H 422
+++ Y AVE + M PDEIT S+L AC+ G + G++ H
Sbjct: 566 NILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEH 625
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + L Y +++D+ + ++ A E ++P D + W +++ R+
Sbjct: 626 KFHIAPNLKHYA----SVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677
>gi|255553021|ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543185|gb|EEF44717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/603 (64%), Positives = 473/603 (78%), Gaps = 10/603 (1%)
Query: 3 MAFCAKTSQTPLRQNLRNPKTRIPE-------TSFYFKP-KTRHFSSKNAQSVQVLNTQN 54
MAF AKTSQ PL + + P + + +F FKP KT FSS + + T
Sbjct: 1 MAFSAKTSQIPLHLDSKTPNSSNSQHPNFRKALAFSFKPLKTHPFSSLKSPKTSLTTTNT 60
Query: 55 TSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
+ S NS L +LCL G LE A+K+L+SMQEL I V+++ + L+RLCE KRGY EG
Sbjct: 61 SLSTTQNPTNSHLLQLCLEGKLEHAIKHLNSMQELKILVEDETFIALIRLCENKRGYTEG 120
Query: 115 LYL-HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
Y+ +V++ ++ LSVRLGNA LSM+V+F DL +AW VFG+M +R+LFSWNVL+GGYAK
Sbjct: 121 DYVFKAVLNSLVNPLSVRLGNALLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAK 180
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AGFFDEAL LY RM WVG +KPD+YTFPCVLR+CGG D RGKE+H HVIRFG+E DV
Sbjct: 181 AGFFDEALCLYHRMLWVG-IKPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVS 239
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
VNALITMYVKCG + AR VFD M +RDRISWNAMISGYFENGE ++GL LF+ M E+
Sbjct: 240 AVNALITMYVKCGCVGSARTVFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELS 299
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
VDPD MT++SVISA EL+GD++LGRE+HGYV++ G+ +DVSV + LI+MY S G +E E
Sbjct: 300 VDPDLMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAE 359
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVFS E +DVVSWT MIS YEG+++ DKA+ETY+ ME G +PDEITIA VLSACA LG
Sbjct: 360 KVFSETECRDVVSWTAMISGYEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASLG 419
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LDLG++LH+LA R GL+S++I+AN+LIDMYSKCKCIDKALEVFH I DKNVISWTSIIL
Sbjct: 420 QLDLGMRLHELANRMGLMSFVIVANSLIDMYSKCKCIDKALEVFHCIQDKNVISWTSIIL 479
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
GLR+NNRSFEAL FFRKM NLKPNS+TL+S+LSACARIGALMCGKEIHAHAL+ + ++
Sbjct: 480 GLRINNRSFEALSFFRKMKRNLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYE 539
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
GFLPNA+LDMYVRCG++ A NQFN + DV+AWNIL+ GYAE+GQGA+A E F KMI+S
Sbjct: 540 GFLPNAILDMYVRCGKLGLALNQFNLYKEDVAAWNILMRGYAEQGQGAMAVELFHKMIES 599
Query: 594 KGN 596
K N
Sbjct: 600 KVN 602
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 3/338 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L M EL++ D + +++ CE G +H V +T V +
Sbjct: 282 NGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSV 341
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ + M+ G A VF + RD+ SW +I GY D+AL Y+ M + G
Sbjct: 342 HSLLIQMYASLGYWKEAEKVFSETECRDVVSWTAMISGYEGNLMHDKALETYKNM-ELAG 400
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T CVL C + L G +H R G + V V N+LI MY KC + +A
Sbjct: 401 IVPDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVANSLIDMYSKCKCIDKAL 460
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + ++ ISW ++I G N + L F M+ L P+ +TL SV+SA +G
Sbjct: 461 EVFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKMKRNL-KPNSITLISVLSACARIG 519
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H + +K + + N ++ MY+ G F+ + +DV +W ++
Sbjct: 520 ALMCGKEIHAHALKTAMVYEGFLPNAILDMYVRCGKLGLALNQFN-LYKEDVAAWNILMR 578
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
Y AVE + M PD++T ++L AC+
Sbjct: 579 GYAEQGQGAMAVELFHKMIESKVNPDDVTYIALLCACS 616
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL+ +M+ I DE + ++ C D G+ LH + ++ V + N+
Sbjct: 387 DKALETYKNMELAGIVPDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVANSL 446
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K + A VF + D+++ SW +I G EALS +++M +KP+
Sbjct: 447 IDMYSKCKCIDKALEVFHCIQDKNVISWTSIILGLRINNRSFEALSFFRKM--KRNLKPN 504
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL C + L GKE+H H ++ + + NA++ MYV+CG L A F+
Sbjct: 505 SITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLPNAILDMYVRCGKLGLALNQFN 564
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ K D +WN ++ GY E G+ + LF M E V+PD +T +++ A G
Sbjct: 565 -LYKEDVAAWNILMRGYAEQGQGAMAVELFHKMIESKVNPDDVTYIALLCACSRSG 619
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/604 (63%), Positives = 473/604 (78%), Gaps = 14/604 (2%)
Query: 3 MAFCAKTSQTPLRQNLRNP-----------KTRIPETSFYFKPKTRHFSSKNAQSVQVLN 51
MA AK S + LR +P ++ +F T H + A+ + V N
Sbjct: 1 MAAFAKPSHSQLRAQRDHPLLPSTSTSTSSNFKLKTFTFSHNLHTLHPPFRKAKHICVSN 60
Query: 52 TQNTSSIAT--KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
+ T++ + NPNS + +LCL G+L++A+ YLDSM EL I V++DA V L+RLCEWKR
Sbjct: 61 SATTTTSLSSNHNPNSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKR 120
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
EG ++S VS +MSHLS++LGNA LSMFV+FG+L AWYVFG+M R+LFSWNVL+G
Sbjct: 121 ARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVG 180
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
GYAKAG FDEAL LY RM WVG VKPDVYTFPCVLRTCGG+P+L RG+E+HVHVIR+G+E
Sbjct: 181 GYAKAGLFDEALDLYHRMLWVG-VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFE 239
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+DVDVVNALITMYVKCGD+ ARLVFD MP RDRISWNAMISGYFENG ++GL LF MM
Sbjct: 240 SDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMM 299
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ VDPD MT++SVI+A EL+GD++LGR++HGYV++ F D S+ N LI MY S G
Sbjct: 300 IKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLI 359
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE E VFSR E +D+VSWT MIS YE ++P KA+ETY+MMEAEG MPDEITIA VLSAC
Sbjct: 360 EEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSAC 419
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+CL NLD+G+ LH++A + GL+SY I+AN+LIDMY+KCKCIDKALE+FH +KN++SWT
Sbjct: 420 SCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWT 479
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
SIILGLR+NNR FEAL FFR+M+ LKPNSVTLV +LSACARIGAL CGKEIHAHALR G
Sbjct: 480 SIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTG 539
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
V+FDGF+PNA+LDMYVRCGRM+ AW QF S + +V++WNILLTGYAERG+GA A E F++
Sbjct: 540 VSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQR 599
Query: 590 MIDS 593
M++S
Sbjct: 600 MVES 603
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/551 (29%), Positives = 262/551 (47%), Gaps = 35/551 (6%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++AL M + + D ++R C G +H V + V +
Sbjct: 186 GLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV 245
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M+VK GD+ A VF KM +RD SWN +I GY + G E L L+ M V
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYP-V 304
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD+ T V+ C + D + G+++H +V+R + D + N+LI MY G + A
Sbjct: 305 DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAET 364
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF RD +SW AMISGY K L + MM + PD +T++ V+SA + +
Sbjct: 365 VFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCN 424
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-- 371
+G +H + G V N LI MY ++ ++F K++VSWT++I
Sbjct: 425 LDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG 484
Query: 372 -----SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
C+E + + + P+ +T+ VLSACA +G L G ++H A+
Sbjct: 485 LRINNRCFEALFFFREMIRRLK--------PNSVTLVCVLSACARIGALTCGKEIHAHAL 536
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
RTG+ + N ++DMY +C ++ A + F + D V SW ++ G + A
Sbjct: 537 RTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATE 595
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----AL 540
F++M+ N+ PN VT +SIL AC+R G + G E + ++++ + +PN +
Sbjct: 596 LFQRMVESNVSPNEVTFISILCACSRSGMVAEGLE-YFNSMKYKYS---IMPNLKHYACV 651
Query: 541 LDMYVRCGRMKPAWN--QFNSNERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDS 593
+D+ R G+++ A+ Q + D + W LL + E G+ A AE F+ S
Sbjct: 652 VDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELA-AENIFQDDTTS 710
Query: 594 KGNWRKLMGLF 604
G + L L+
Sbjct: 711 VGYYILLSNLY 721
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 191/412 (46%), Gaps = 9/412 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ M + + D + +++ CE G +H V +T +
Sbjct: 286 NGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI 345
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ G + A VF + RDL SW +I GY +AL Y +M G
Sbjct: 346 HNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETY-KMMEAEG 404
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T VL C + +L G +H + G + V N+LI MY KC + +A
Sbjct: 405 IMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKAL 464
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL--VDPDFMTLSSVISASEL 310
+F +++ +SW ++I G N + L F RE++ + P+ +TL V+SA
Sbjct: 465 EIFHSTLEKNIVSWTSIILGLRINNRCFEALFFF---REMIRRLKPNSVTLVCVLSACAR 521
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G G+E+H + ++ G S D + N ++ MY+ G E K F ++ +V SW +
Sbjct: 522 IGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNIL 580
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTG 429
++ Y A E +Q M P+E+T S+L AC+ G + G++ + + +
Sbjct: 581 LTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYS 640
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
++ + ++D+ + +++A E ++P K + W +++ R+++
Sbjct: 641 IMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHH 692
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/579 (64%), Positives = 459/579 (79%), Gaps = 2/579 (0%)
Query: 15 RQNLRNPKTRIPET-SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLN 73
R N + P P+T SF +T + + Q + V+ + S + N L ELCL
Sbjct: 16 RSNPQVPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQ 75
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+LEQA+K L+SM EL I V+EDA + L+RLCEW+R DEG ++ +VS + S L VRLG
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LSMFV+FG+L AWYVFGKM +RD+FSWNVL+GGYAKAG FDEAL+LY RM W +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+VYTFP VL+TC GV D+ RGKE+H HVIRFG+E+DVDV NALITMYVKCGD+ AR+
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MPKRDRISWNAMISGYFENG ++GL LF MMRE+ VDPD +T+++V SA EL+ +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
E+LGR VHGYV+K F D+S+ N LI+MY S G EE E VFSRMESKDVVSWT MI+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
LP KAVETY+MME EG +PDEIT+ SVLSACAC+G+LDLGI+LH++A++TGL+S+
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+I++N+LIDMYSKCKC+D ALEVF I KNV+SWTS+ILGLR+NNRSFEAL+FFR+M
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE 494
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++KPNSVTL+S+LSACARIGALM GKEIHAHALR GV FDGFLPNA+LDMYVRCGR PA
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554
Query: 554 WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
NQFNS ++DV+AWNILLTGYA++GQ LA E F KM++
Sbjct: 555 LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLE 593
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 207/379 (54%), Gaps = 3/379 (0%)
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V + NAL++M+V+ G+L+ A VF M +RD SWN ++ GY + G + + L L+ M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ T SV+ V D G+E+H +VI+ GF DV V N LI MY+ G+
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F +M +D +SW MIS Y + + +E + MM PD IT+ +V SAC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L N LG +H +++ I + N+LI MYS +++A VF ++ K+V+SWT++
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I L + F+A+ ++ M L + P+ +TLVS+LSACA IG L G +H A++ G+
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ N+L+DMY +C + A F N + ++V +W L+ G + A FFR+
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 590 MIDS-KGNWRKLMGLFRKC 607
M +S K N L+ + C
Sbjct: 492 MKESMKPNSVTLISVLSAC 510
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 189/408 (46%), Gaps = 5/408 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ M+EL++ D + + CE G +H V K+ + +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ G L A VF +M +D+ SW +I +A+ Y +M + G
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY-KMMELEG 395
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T VL C + L G +H I+ G + V V N+LI MY KC + A
Sbjct: 396 ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + ++ +SW ++I G N + L+ F M+E + P+ +TL SV+SA +G
Sbjct: 456 EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESM-KPNSVTLISVLSACARIG 514
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H + ++ G D + N ++ MY+ G + F+ + KDV +W +++
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLT 573
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y AVE + M PDEIT S+L AC+ G + G++ + + + L
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ ++D+ + +D A + +P + + W +++ R++
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/579 (64%), Positives = 459/579 (79%), Gaps = 2/579 (0%)
Query: 15 RQNLRNPKTRIPET-SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLN 73
R N + P P+T SF +T + + Q + V+ + S + N L ELCL
Sbjct: 16 RSNPQVPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQ 75
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+LEQA+K L+SM EL I V+EDA + L+RLCEW+R DEG ++ +VS + S L VRLG
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LSMFV+FG+L AWYVFGKM +RD+FSWNVL+GGYAKAG FDEAL+LY RM W +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+VYTFP VL+TC GV D+ RGKE+H HVIRFG+E+DVDV NALITMYVKCGD+ AR+
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MPKRDRISWNAMISGYFENG ++GL LF MMRE+ VDPD +T+++V SA EL+ +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
E+LGR VHGYV+K F D+S+ N LI+MY S G EE E VFSRMESKDVVSWT MI+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
LP KAVETY+MME EG +PDEIT+ SVLSACAC+G+LDLGI+LH++A++TGL+S+
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+I++N+LIDMYSKCKC+D ALEVF I KNV+SWTS+ILGLR+NNRSFEAL+FFR+M
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE 494
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++KPNSVTL+S+LSACARIGALM GKEIHAHALR GV FDGFLPNA+LDMYVRCGR PA
Sbjct: 495 SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA 554
Query: 554 WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
NQFNS ++DV+AWNILLTGYA++GQ LA E F KM++
Sbjct: 555 LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLE 593
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 207/379 (54%), Gaps = 3/379 (0%)
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V + NAL++M+V+ G+L+ A VF M +RD SWN ++ GY + G + + L L+ M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ T SV+ V D G+E+H +VI+ GF DV V N LI MY+ G+
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F +M +D +SW MIS Y + + +E + MM PD IT+ +V SAC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L N LG +H +++ I + N+LI MYS +++A VF ++ K+V+SWT++
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I L + F+A+ ++ M L + P+ +TLVS+LSACA IG L G +H A++ G+
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ N+L+DMY +C + A F N + ++V +W L+ G + A FFR+
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491
Query: 590 MIDS-KGNWRKLMGLFRKC 607
M +S K N L+ + C
Sbjct: 492 MKESMKPNSVTLISVLSAC 510
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 189/408 (46%), Gaps = 5/408 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ M+EL++ D + + CE G +H V K+ + +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ G L A VF +M +D+ SW +I +A+ Y +M + G
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY-KMMELEG 395
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T VL C + L G +H I+ G + V V N+LI MY KC + A
Sbjct: 396 ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + ++ +SW ++I G N + L+ F M+E + P+ +TL SV+SA +G
Sbjct: 456 EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESM-KPNSVTLISVLSACARIG 514
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H + ++ G D + N ++ MY+ G + F+ + KDV +W +++
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLT 573
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y AVE + M PDEIT S+L AC+ G + G++ + + + L
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ ++D+ + +D A + +P + + W +++ R++
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIH 681
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/529 (68%), Positives = 441/529 (83%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
+L+ LC NG LE+A+K L+SMQEL + VDED V LVRLCEWKR +EG ++S+ +M
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
S L V LGNAFL+MFV+FG+L AWYVFGKM +R+LFSWNVL+GGYAK G+FDEA+ LY
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM WVGGVKPDVYTFPCVLRTCGG+PDL RGKEVHVHV+R+GYE D+DVVNALITMYVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GD+ ARL+FD MP+RD ISWNAMISGYFENG +GL LF MR + VDPD MTL+SVI
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA EL+GD +LGR++H YVI GF+ D+SVCN L +MYL+ G+ E EK+FSRME KD+V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTMIS YE + LPDKA++TY+MM+ + PDEIT+A+VLSACA LG+LD G++LH+LA
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ LISY+I+AN LI+MYSKCKCIDKAL++FH IP KNVISWTSII GLRLNNR FEAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
IF R+M + L+PN++TL + L+ACARIGALMCGKEIHAH LR GV D FLPNALLDMYV
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 546 RCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
RCGRM AW+QFNS ++DV++WNILLTGY+ERGQG++ E F +M+ S+
Sbjct: 545 RCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR 593
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 4/409 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ +M+ L++ D L +++ CE G +H+ V T + + +
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ M++ G A +F +M +D+ SW +I GY D+A+ Y RM
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDS 393
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD T VL C + DL G E+H I+ + V V N LI MY KC + +A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P+++ ISW ++I+G N + L+ M+ L P+ +TL++ ++A +G
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTL-QPNAITLTAALAACARIG 512
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H +V++ G D + N L+ MY+ G F+ + KDV SW +++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLT 571
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y VE + M PDEIT S+L C+ + G+ G+
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
+ ++D+ + + +A + ++P + W +++ R++++
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK 680
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/529 (68%), Positives = 443/529 (83%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
+L+ LC NG LE+A+K L+SMQEL + VDED V LVRLCEWKR ++EG ++SV +M
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSM 124
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ LSV LGNAFL+MFV+FG+L AWYVFGKM +R+LFSWNVL+GGYAK G+FDEA+ LY
Sbjct: 125 NSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYH 184
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM WVGGVKPDVYTFPCVLRTCGG+PDL RG+EVHVHV+R+GYE D+DVVNALITMYVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GD+ ARL+FD MP+RD ISWNAMISGYFENG +GL LF MR + VDPD MTL+SVI
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA EL+GD +LGR++H YVI GF+ D+SVCN L +MYL G+ E EK+FSRM+ KD+V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTMIS YE + LP+KA++TY+MM+ + PDEIT+A+VLSACA LG+LD G++LH+LA
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ LISY+I+AN LI+MYSKCKCIDKAL++FH IP KNVISWTSII GLRLNNR FEAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
IFFR+M + L+PN++TL + L+ACARIGALMCGKEIHAH LR GV D FLPNALLDMYV
Sbjct: 485 IFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 546 RCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
RCGRM AWNQFNS ++DVS+WNILLTGY+ERGQG++ E F +M+ ++
Sbjct: 545 RCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKAR 593
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 4/408 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + LK +M+ L++ D L +++ CE G +H+ V T + + +
Sbjct: 275 NGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ M++ G A +F +M +D+ SW +I GY ++A+ Y RM
Sbjct: 335 CNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTY-RMMDQDS 393
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD T VL C + DL G E+H I+ + V V N LI MY KC + +A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P+++ ISW ++I+G N + L+ F M+ L P+ +TL++ ++A +G
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTL-QPNAITLTAALAACARIG 512
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H +V++ G D + N L+ MY+ G F+ + KDV SW +++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLT 571
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y VE + M PDEIT S+L C + G+ G+
Sbjct: 572 GYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTP 631
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ ++D+ + + +A + ++P + W +++ R+++
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/534 (68%), Positives = 449/534 (84%), Gaps = 2/534 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL-HSVVS 122
NSRL +LCL+G+LEQALK+L SMQE+ I V+ED V L+RLCE KRGY EG Y+ +V+S
Sbjct: 2 NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ LSVRLGNA LSMFV+FGD+G+AW VFG+M +RDLFSWNVL+GGY KAGFFDEAL
Sbjct: 62 SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
LY R+ W G++PDVYTFP VLR+C G DL RG+EVH HV+RF ++ DVDVVNALITMY
Sbjct: 122 LYHRILW-AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMY 180
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
VKCGD+V AR++FD MP RDRISWNAMISGYFEN E ++GL LF MRE+ +DPD MT++
Sbjct: 181 VKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMT 240
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SVISA EL+GDE+LG ++H YV++ + ++SV N LI+MYLS G+ +E E VFS ME +
Sbjct: 241 SVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR 300
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVVSWTT+IS ++LPDKA+ETY+ ME G+MPDE+TIASVLSACA LG LD+G+KLH
Sbjct: 301 DVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLH 360
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+LA RTG I Y+++AN+LIDMYSKCK I+KALE+FHQIPDK+VISWTS+I GLR+NNR F
Sbjct: 361 ELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCF 420
Query: 483 EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
EALIFFRKM+L KPNSVTL+S LSACAR+GALMCGKEIHAHAL+ G+ FDGFLPNA+LD
Sbjct: 421 EALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILD 480
Query: 543 MYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+YVRCGRM+ A NQFN NE+DV AWNILLTGYA++G+GA+ E F++M++S+ N
Sbjct: 481 LYVRCGRMRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEIN 534
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 202/419 (48%), Gaps = 22/419 (5%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
N+ CL G L+ M+EL+I D + +++ CE G LHS V +T
Sbjct: 214 NDECLEG-----LELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYD 268
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
++ + N+ + M++ G A VF M RD+ SW +I G D+AL Y+ M
Sbjct: 269 GNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTM 328
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+ G PD T VL C + L G ++H R G+ V V N+LI MY KC
Sbjct: 329 -EITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKR 387
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD--PDFMTLSSVI 305
+ +A +F +P +D ISW ++I+G N + L+ F R++++ P+ +TL S +
Sbjct: 388 IEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFF---RKMILKSKPNSVTLISAL 444
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA VG G+E+H + +K G D + N ++ +Y+ G F+ + KDV
Sbjct: 445 SACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVG 503
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W +++ Y +E ++ M PD++T S+L AC+ G + G++ Q
Sbjct: 504 AWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQ-R 562
Query: 426 MRTGLISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
M+ ++Y I N ++D+ + +++A E ++P K + W +++ R++
Sbjct: 563 MK---VNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH 618
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 285/530 (53%), Positives = 379/530 (71%), Gaps = 5/530 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
++ L LC +G L QAL L+S E DE A V L RLCEW+R D G+ +
Sbjct: 68 SAALRALCSHGQLAQALWLLESSPEPP---DEGAYVALFRLCEWRRAVDAGMRACARADA 124
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+RLGNA LSM V+FG++ HAW VF KM +RD+FSWNV++GGY K GF +EAL L
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y RM W G++PDVYTFPCVLRTCGG+PD + G+EVH HV+RFG+ +VDV+NAL+TMY
Sbjct: 185 YYRMLW-AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGD+V AR VFDGM D ISWNAMI+G+FEN E GL LF+ M E V P+ MT++S
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V AS ++ + +E+HG+ +K GF+ DV+ CN LI+MY S G + K+FSRME+KD
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SWT MIS YE + PDKA+E Y +ME PD++TIAS L+ACACLG LD+GIKLH+
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHE 423
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA G I Y+++AN L++MY+K K IDKA+EVF + +K+V+SW+S+I G N+RSFE
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483
Query: 484 ALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
AL +FR M+ ++KPNSVT ++ LSACA GAL GKEIHA+ LR G+ +G++PNALLD+
Sbjct: 484 ALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
YV+CG+ AW QF+ +E+DV +WNI+L+G+ G G +A F +M++
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 593
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 192/392 (48%), Gaps = 5/392 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H K + V N+ + M+ G +G A +F +M +D SW +I GY K GF
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL +Y M + V PD T L C + L G ++H G+ V V N
Sbjct: 380 PDKALEVYALME-LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY K + +A VF M ++D +SW++MI+G+ N + L F M V P
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKP 497
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ +T + +SA G + G+E+H YV++ G + V N L+ +Y+ G F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
S KDVVSW M+S + L D A+ + M G PDE+T ++L AC+ G +
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617
Query: 417 LGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
G +L H + + ++ + ++D+ S+ + +A + +++P K + W +++ G
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
R+ +R E K++L L+PN V +L
Sbjct: 678 CRI-HRHVELGELAAKVILELEPNDVAYHVLL 708
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 4/302 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ M+ N+ D+ + + + C D G+ LH + V +
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K + A VF M ++D+ SW+ +I G+ EAL ++ M +G
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--LGH 494
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF L C L+ GKE+H +V+R G ++ V NAL+ +YVKCG A
Sbjct: 495 VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAW 554
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F ++D +SWN M+SG+ +G L LF M E+ PD +T +++ A G
Sbjct: 555 AQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAG 614
Query: 313 DEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
G E+ H K ++ ++ + G E + +RM K D W +
Sbjct: 615 MVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGAL 674
Query: 371 IS 372
++
Sbjct: 675 LN 676
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
++E+ PDE ++ C +D G++ A + + N ++ M +
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILS 507
I A VF ++P+++V SW ++ G EAL +++R + ++P+ T +L
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSA 566
C I G+E+HAH LR G + + NAL+ MY +CG + A F+ D +
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++ G+ E + E F M++++
Sbjct: 266 WNAMIAGHFENHECEAGLELFLTMLENE 293
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/530 (53%), Positives = 379/530 (71%), Gaps = 5/530 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
++ L LC +G L QAL L+S E DE A V L RLCEW+R D G+ +
Sbjct: 68 SAALRALCSHGQLAQALWLLESSPEPP---DEGAYVALFRLCEWRRAVDAGMRACARADA 124
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+RLGNA LSM V+FG++ HAW VF KM +RD+FSWNV++GGY K GF +EAL L
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y RM W G++PDVYTFPCVLRTCGG+PD + G+EVH HV+RFG+ +VDV+NAL+TMY
Sbjct: 185 YYRMLW-AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGD+V AR VFDGM D ISWNAMI+G+FEN E GL LF+ M E V P+ MT++S
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V AS ++ + +E+HG+ +K GF+ DV+ CN LI+MY S G + K+FSRME+KD
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SWT MIS YE + PDKA+E Y +ME PD++TIAS L+ACACLG LD+GIKLH+
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHE 423
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA G I Y+++AN L++MY+K K IDKA+EVF + +K+V+SW+S+I G N+RSFE
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483
Query: 484 ALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
AL +FR M+ ++KPNSVT ++ LSACA GAL GKEIHA+ LR G+ +G++PNALLD+
Sbjct: 484 ALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
YV+CG+ AW QF+ +E+DV +WNI+L+G+ G G +A F +M++
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 593
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 192/392 (48%), Gaps = 5/392 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H K + V N+ + M+ G +G A +F +M +D SW +I GY K GF
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL +Y M + V PD T L C + L G ++H G+ V V N
Sbjct: 380 PDKALEVYALME-LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY K + +A VF M ++D +SW++MI+G+ N + L F M V P
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG-HVKP 497
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ +T + +SA G + G+E+H YV++ G + V N L+ +Y+ G F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
S KDVVSW M+S + L D A+ + M G PDE+T ++L AC+ G +
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617
Query: 417 LGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
G +L H + + ++ + ++D+ S+ + +A + +++P K + W +++ G
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
R+ +R E K++L L+PN V +L
Sbjct: 678 CRI-HRHVELGELAAKVILELEPNDVAYHVLL 708
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 4/302 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ M+ N+ D+ + + + C D G+ LH + V +
Sbjct: 377 NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K + A VF M ++D+ SW+ +I G+ EAL ++ M +G
Sbjct: 437 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--LGH 494
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF L C L+ GKE+H +V+R G ++ V NAL+ +YVKCG A
Sbjct: 495 VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAW 554
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F ++D +SWN M+SG+ +G L LF M E+ PD +T +++ A G
Sbjct: 555 AQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAG 614
Query: 313 DEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
G E+ H K ++ ++ + G E + +RM K D W +
Sbjct: 615 MVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGAL 674
Query: 371 IS 372
++
Sbjct: 675 LN 676
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
++E+ PDE ++ C +D G++ A + + N ++ M +
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILS 507
I A VF ++P+++V SW ++ G EAL +++R + ++P+ T +L
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSA 566
C I G+E+HAH LR G + + NAL+ MY +CG + A F+ D +
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCIS 265
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++ G+ E + E F M++++
Sbjct: 266 WNAMIAGHFENHECEAGLELFLTMLENE 293
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/528 (54%), Positives = 375/528 (71%), Gaps = 5/528 (0%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L ELC +G L+QAL L+S E DEDA V L LCEW+R + GL
Sbjct: 69 LRELCAHGELQQALWLLESSPEPP---DEDAYVALFHLCEWRRAAEHGLRACGHADAAHG 125
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+RLGNA LSM V+FG+ HAW VF KM +RD+FSWNV++GGY KAGF +EAL LY R
Sbjct: 126 TFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHR 185
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M W G +PDVYTFPCVLR+CGGVPDL G+EVH HV+RFG +VDV+NAL+TMY KCG
Sbjct: 186 MLWAG-ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCG 244
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ AR VFDGM D ISWNAMI+G+FEN E GL LF+ M E V+P+ MT++SV
Sbjct: 245 DVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTV 304
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
AS L+ D +E+H +K GF+ DV+ CN LI+MY S G E VFSRME++D +S
Sbjct: 305 ASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMS 364
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT MIS YE + PDKA+E Y +ME PD++T+AS L+ACA LG LD+GIKLH+LA
Sbjct: 365 WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELAT 424
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G I YI++AN L++MY+K K I+KA+EVF +PDK+VISW+S+I G N+++FEAL
Sbjct: 425 SKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALY 484
Query: 487 FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+FR M+ ++KPNSVT ++ L+ACA G+L CGKEIHAH LR G+A +G++PNALLD+YV+
Sbjct: 485 YFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVK 544
Query: 547 CGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG+ AW QF ++ +DV +WNI+L G+ G G +A FF +M+++
Sbjct: 545 CGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLET 592
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 193/395 (48%), Gaps = 9/395 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H++ K V N+ + M+ G +G A VF +M RD SW +I GY K GF
Sbjct: 318 IHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGF 377
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL +Y M V V PD T L C + L G ++H G+ + V N
Sbjct: 378 PDKALEVYALME-VNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD- 295
AL+ MY K + +A VF MP +D ISW++MI+G+ N + + L F R +L D
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYF---RHMLADV 493
Query: 296 -PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P+ +T + ++A G + G+E+H +V++ G + + V N L+ +Y+ G
Sbjct: 494 KPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F +KDVVSW M++ + D A+ + M G PDE+T ++L C+ G
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGM 613
Query: 415 LDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ G +L H + + ++ + ++D+ S+ + + +++P + W +++
Sbjct: 614 VSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALL 673
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
G R+ +R+ E K++L L+PN +LS
Sbjct: 674 NGCRI-HRNIELGELAAKIVLELEPNDAGYHVLLS 707
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 137/302 (45%), Gaps = 4/302 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ M+ N+ D+ + + + C D G+ LH + + + +
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVV 434
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K + A VF M D+D+ SW+ +I G+ EAL ++ M +
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM--LAD 492
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF L C L+ GKE+H HV+R G ++ V NAL+ +YVKCG A
Sbjct: 493 VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAW 552
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F +D +SWN M++G+ +G L F M E PD +T +++ G
Sbjct: 553 AQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAG 612
Query: 313 DEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTM 370
G E+ H K ++ ++ + G EG +RM + D W +
Sbjct: 613 MVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGAL 672
Query: 371 IS 372
++
Sbjct: 673 LN 674
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
++E+ PDE ++ C + G++ A + + N ++ M +
Sbjct: 84 LLESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFG 143
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILS 507
A +VF ++P+++V SW ++ G EAL + +M+ +P+ T +L
Sbjct: 144 ETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLR 203
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
+C + L G+E+HAH LR G+ + + NAL+ MY +CG ++ A F+ + D +
Sbjct: 204 SCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCIS 263
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++ G+ E + E F M++ +
Sbjct: 264 WNAMIAGHFENHECEAGLELFLHMLEDE 291
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/529 (53%), Positives = 378/529 (71%), Gaps = 5/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
++ L LC +G L QAL L+S E DE A V L RLCEW+R D G+ +
Sbjct: 68 SAALRALCSHGQLAQALWLLESSPEPP---DEGAYVALFRLCEWRRAVDAGMRACARADA 124
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+RLGNA LSM V+FG++ HAW VF KM +RD+FSWNV++GGY K GF +EAL L
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y RM W G++PDVYTFPCVLRTCGG+PD + G+EVH HV+RFG+ +VDV+NAL+TMY
Sbjct: 185 YYRMLW-AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGD+V AR VFDGM D ISWNAMI+G+FEN E GL LF+ M E V P+ MT++S
Sbjct: 244 KCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V AS ++ + +E+HG+ +K GF+ DV+ CN LI+MY S G + K+FSRME+KD
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SWT MIS YE + PDKA+E Y +ME PD++TIAS L+ACACLG LD+GIKLH+
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHE 423
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA G I Y+++AN L++MY+K K IDKA+EVF + +K+V+SW+S+I G N+RSF+
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD 483
Query: 484 ALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
AL +FR M+ ++KPNSVT ++ LSACA GAL GKEIHA+ LR G+ +G++PNALLD+
Sbjct: 484 ALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
YV+CG+ AW QF+ +E+DV +WNI+L+G+ G G +A F +M+
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/479 (38%), Positives = 274/479 (57%), Gaps = 9/479 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H K + V N+ + M+ G +G A +F +M +D SW +I GY K GF
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL +Y M + V PD T L C + L G ++H G+ V V N
Sbjct: 380 PDKALEVYALME-LHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY K + +A VF M ++D +SW++MI+G+ N L F M V P
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKP 497
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ +T + +SA G + G+E+H YV++ G + V N L+ +Y+ G F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAE-GSMPDEITIASVLSACACLGN 414
S KDVVSW M+S + L D A+ + QMM G M +A+ G
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACL----GR 613
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
LD+GIKLH+LA G I Y+++AN L++MY+K K IDKA+EVF + +K+V+SW+S+I G
Sbjct: 614 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 673
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N+RSF+AL +FR M+ ++KPNSVT ++ LSACA GAL GKEIHA+ LR G+ +G
Sbjct: 674 FCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEG 733
Query: 535 FLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++PNALLD+YV+CG+ AW QF+ +E+DV +WNI+L+G+ G G +A F +M++
Sbjct: 734 YVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 792
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 205/445 (46%), Gaps = 9/445 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S + C N AL Y M ++ + + + C G +H+ V +
Sbjct: 469 SSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ NA L ++VK G +AW F ++D+ SWN+++ G+ G D ALSL
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + + + G L G ++H G+ V V NAL+ MY
Sbjct: 588 FNQMMYTSLGRMGACSALAACACLG---RLDVGIKLHELAQNKGFIRYVVVANALLEMYA 644
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K + +A VF M ++D +SW++MI+G+ N L F M V P+ +T +
Sbjct: 645 KSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIA 703
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SA G + G+E+H YV++ G + V N L+ +Y+ G FS KD
Sbjct: 704 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKD 763
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VVSW M+S + L D A+ + M G PDE+T ++ AC+ G + G +L H
Sbjct: 764 VVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFH 822
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
+ + ++ + ++D+ S+ + +A + +++P K + W +++ G R+ +R
Sbjct: 823 RRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRI-HRH 881
Query: 482 FEALIFFRKMMLNLKPNSVTLVSIL 506
E K++L L+PN V +L
Sbjct: 882 VELGELAAKVILELEPNDVAYHVLL 906
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
++E+ PDE ++ C +D G++ A + + N ++ M +
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILS 507
I A VF ++P+++V SW ++ G EAL +++R + ++P+ T +L
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSA 566
C I G+E+HAH LR G + + NAL+ MY +CG + A F+ D +
Sbjct: 206 TCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCIS 265
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++ G+ E + E F M++++
Sbjct: 266 WNAMIAGHFENHECEAGLELFLTMLENE 293
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 285/527 (54%), Positives = 377/527 (71%), Gaps = 5/527 (0%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
L LC +G L QAL L+S E DEDA V L RLCEW+R + GL +
Sbjct: 68 ELRALCSHGQLAQALWLLESSAEPP---DEDAYVALFRLCEWRRAVEPGLRACAHADDRH 124
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ +RLGNA LSM V+FG+ HAW VF KM +RD+FSWNV++GGY KAG +EAL LY
Sbjct: 125 AWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYH 184
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM W GV+PDVYTFPCVLR+CGGVPD + G+EVH HV+RFG+ +VDV+NAL+TMY KC
Sbjct: 185 RMMW-AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKC 243
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GD+V AR VFD M D ISWNAMI+G+FENGE GL LF+ M + V P+ MT++SV
Sbjct: 244 GDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVT 303
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
AS L+ D +E+HG +K GF+ DV+ CN LI+MY S G + VFSRM+++D +
Sbjct: 304 VASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAM 363
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWT MIS YE + PDKA+E Y +ME PD+ITIAS L+ACACLG+LD+G+KLH+LA
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
G +SY+++ N L++MY+K K IDKA+EVF +P+K+V+SW+S+I G N+R+FEAL
Sbjct: 424 ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEAL 483
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+FR M+ ++KPNSVT ++ L+ACA GAL GKEIHAH LR G+A++G+LPNAL+D+YV
Sbjct: 484 YYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYV 543
Query: 546 RCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+CG+ AW QF ++ +DV +WNI++ G+ G G A FF +M+
Sbjct: 544 KCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMV 590
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 195/397 (49%), Gaps = 17/397 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
GL +K M L+V+ G N+ + M+ G +G A VF +M RD SW
Sbjct: 307 GLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWT 366
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I GY K GF D+AL +Y M V V PD T L C + L G ++H
Sbjct: 367 AMISGYEKNGFPDKALEVYALME-VNNVSPDDITIASALAACACLGSLDVGVKLHELAES 425
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
G+ + V V NAL+ MY K + +A VF MP++D +SW++MI+G+ N + L
Sbjct: 426 KGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYY 485
Query: 286 FIMMREVLVD--PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
F R +L D P+ +T + ++A G + G+E+H +V++ G + + + N LI +Y
Sbjct: 486 F---RHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLY 542
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
+ G F +KDVVSW MI+ + + A+ + M G PDE+T
Sbjct: 543 VKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFV 602
Query: 404 SVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP- 461
++L AC+ G + G +L H + + ++ + ++D+ S+ + +A +++P
Sbjct: 603 ALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPI 662
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+ W +++ G R+ +R E K +L L+PN
Sbjct: 663 TPDAAVWGALLNGCRI-HRHVELGELAAKYVLELEPN 698
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ M+ N+ D+ + + + C D G+ LH + V +
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVV 434
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K + A VF M ++D+ SW+ +I G+ EAL ++ M +
Sbjct: 435 TNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--LAD 492
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF L C L+ GKE+H HV+R G + + NALI +YVKCG A
Sbjct: 493 VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAW 552
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F +D +SWN MI+G+ +G L F M ++ PD +T +++ A G
Sbjct: 553 AQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGG 612
Query: 313 DEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTM 370
G E+ H K ++ ++ + G E + M + D W +
Sbjct: 613 MVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGAL 672
Query: 371 IS 372
++
Sbjct: 673 LN 674
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
++E+ PDE ++ C ++ G++ A + + N ++ M +
Sbjct: 84 LLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFG 143
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILS 507
A VF ++P+++V SW ++ G EAL + +MM ++P+ T +L
Sbjct: 144 ETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLR 203
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSA 566
+C + G+E+HAH LR G A + + NAL+ MY +CG + A F+S D +
Sbjct: 204 SCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCIS 263
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++ G+ E G+ E F M+ +
Sbjct: 264 WNAMIAGHFENGECNAGLELFLTMLQDE 291
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/531 (53%), Positives = 378/531 (71%), Gaps = 5/531 (0%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+P++ L LC +G L QAL L+S E DEDA V L RLCEW+R + GL +
Sbjct: 58 DPSTELRALCSHGQLAQALWLLESSAEPP---DEDAYVALFRLCEWRRAVEPGLRACAHA 114
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ +RLGNA LSM V+FG+ HAW VF KM +RD+FSWNV++GGY K+G DEAL
Sbjct: 115 DDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEAL 174
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY RM W GV+PDVYTFPCVLR+CGGVPD + G+EVH HV+RFG+ +VDV+NAL+TM
Sbjct: 175 DLYHRMMW-AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTM 233
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD++ AR VFD M D ISWNAMI+G+FENGE GL LF+ M V P+ MT+
Sbjct: 234 YAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTI 293
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV AS L+ D +E+HG +K GF+ DV+ CN LI+MY S G + VFSRM++
Sbjct: 294 TSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDT 353
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D ++WT MIS YE + PDKA+E Y +ME PD+ITIAS L+ACACLG+LD+G+KL
Sbjct: 354 RDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKL 413
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H+LA G ISYI++ N +++MY+K K IDKA+EVF + +K+V+SW+S+I G N+R+
Sbjct: 414 HELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRN 473
Query: 482 FEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
FEAL +FR M+ ++KPNSVT ++ L+ACA GAL GKEIHAH LR G+ ++G+LPNAL+
Sbjct: 474 FEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALI 533
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D+YV+CG+ AW QF ++ +DV +WNI++ G+ G G A FF +M+
Sbjct: 534 DLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMV 584
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 192/397 (48%), Gaps = 17/397 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
GL +K M L+V+ G N+ + M+ G + A VF +M RD +W
Sbjct: 301 GLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWT 360
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I GY K GF D+AL +Y M V V PD T L C + L G ++H
Sbjct: 361 AMISGYEKNGFPDKALEVYALME-VNNVSPDDITIASALAACACLGSLDVGVKLHELAES 419
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
G+ + + V NA++ MY K + +A VF M ++D +SW++MI+G+ N + L
Sbjct: 420 KGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYY 479
Query: 286 FIMMREVLVD--PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
F R +L D P+ +T + ++A G + G+E+H +V++ G + + N LI +Y
Sbjct: 480 F---RHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLY 536
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
+ G F +KDVVSW MI+ + D A+ + M G PDE+T
Sbjct: 537 VKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFV 596
Query: 404 SVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP- 461
++L AC+ G + G +L H + + ++ + ++D+ S+ + +A +++P
Sbjct: 597 ALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPI 656
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+ W +++ G R+ +R E K +L L+PN
Sbjct: 657 TPDAAVWGALLNGCRI-HRHVELGELAAKYVLALEPN 692
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 4/302 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ M+ N+ D+ + + + C D G+ LH + + +
Sbjct: 369 NGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVV 428
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K + A VF M ++D+ SW+ +I G+ EAL ++ M +
Sbjct: 429 TNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--LAD 486
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF L C L+ GKE+H HV+R G E + + NALI +YVKCG A
Sbjct: 487 VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAW 546
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F +D +SWN MI+G+ +G L F M ++ PD +T +++ A G
Sbjct: 547 AQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGG 606
Query: 313 DEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTM 370
G E+ H K ++ ++ + G E + M + D W +
Sbjct: 607 MVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGAL 666
Query: 371 IS 372
++
Sbjct: 667 LN 668
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 304/540 (56%), Gaps = 4/540 (0%)
Query: 52 TQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY 111
++ T + T + N+++ + C G L A+K L Q + + + ++++LC +
Sbjct: 16 SETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSEL--ELNTYCSVLQLCAELKSL 73
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
++G +HS++S + LG + M+V GDL +F + + +F WN+L+ Y
Sbjct: 74 EDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEY 133
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
AK G + E++ L+++M +G ++ D YTF CVL+ ++ K VH +V++ G+ +
Sbjct: 134 AKIGNYRESVGLFEKMQELG-IRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSY 192
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
VVN+LI Y KCG++ AR++FD + RD +SWN+MISG NG GL FI M
Sbjct: 193 NAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLN 252
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ VD D TL +V+ A VG+ LGR +H Y +K GFS V N L+ MY GN
Sbjct: 253 LGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNG 312
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF +M +VSWT++I+ + L +A+ + M+++G PD + SV+ ACAC
Sbjct: 313 ANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACAC 372
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+LD G ++H + + S + ++N L++MY+KC +++A +F Q+P KN++SW ++
Sbjct: 373 SNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTM 432
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
I G N+ EAL F M LKP+ VT+ +L ACA + AL G+EIH H LR G
Sbjct: 433 IGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF 492
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + AL+DMYV+CG + A F+ ++D+ W +++ GY G G A F KM
Sbjct: 493 SDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKM 552
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 260/517 (50%), Gaps = 8/517 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ +++ + MQEL I D +++ E +H V K +
Sbjct: 137 GNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV 196
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++ + K G++ A +F ++ DRD+ SWN +I G GF L + +M +G V
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG-V 255
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D T VL C V +L G+ +H + ++ G+ V N L+ MY KCG+L A
Sbjct: 256 DVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANE 315
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M + +SW ++I+ + G + + + LF M+ + PD ++SV+ A
Sbjct: 316 VFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNS 375
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GREVH ++ K ++ V N L+ MY G+ EE +FS++ K++VSW TMI
Sbjct: 376 LDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGG 435
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + LP++A++ + M+ + PD++T+A VL ACA L L+ G ++H +R G S
Sbjct: 436 YSQNSLPNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSD 494
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ +A L+DMY KC + A ++F IP K++I WT +I G ++ EA+ F KM +
Sbjct: 495 LHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRV 554
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRM 550
++P + SIL AC G L G ++ +++ + L + ++D+ +R G +
Sbjct: 555 AGIEPEESSFTSILYACTHSGLLKEGWKLF-DSMKSECNIEPKLEHYACMVDLLIRSGNL 613
Query: 551 KPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
A+ + + D + W LL+G LAE+
Sbjct: 614 SRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEK 650
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +NG L++ M L + VD LVN++ C G LH+ K
Sbjct: 228 NSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVK 287
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V N L M+ K G+L A VF KM + + SW +I + + G EA+ L
Sbjct: 288 AGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGL 347
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G++PD+Y V+ C L +G+EVH H+ + +++ V NAL+ MY
Sbjct: 348 FDEM-QSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYA 406
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A L+F +P ++ +SWN MI GY +N + L LF+ M++ L PD +T++
Sbjct: 407 KCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQL-KPDDVTMAC 465
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + GRE+HG++++ G+ D+ V L+ MY+ G +++F + KD
Sbjct: 466 VLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKD 525
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
++ WT MI+ Y +A+ T++ M G P+E + S+L AC G L G KL
Sbjct: 526 MILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFD 585
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNN 479
+ + + ++D+ + + +A + +P K + W +++ G R+++
Sbjct: 586 SMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHH 643
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 23/331 (6%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ D MQ + D A+ ++V C D+G +H+ + K ++ + NA +
Sbjct: 343 EAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALM 402
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G + A +F ++ +++ SWN +IGGY++ +EAL L+ M +KPD
Sbjct: 403 NMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM--QKQLKPDD 460
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T CVL C G+ L++G+E+H H++R GY +D+ V AL+ MYVKCG LV A+ +FD
Sbjct: 461 VTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDM 520
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+PK+D I W MI+GY +G + + F MR ++P+ + +S++ A G K G
Sbjct: 521 IPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEG 580
Query: 318 REVHGYVIKMGFSDDVSVCN--PLIKMY-------LSFGNREEGEKVFSRMESK-DVVSW 367
++ F S CN P ++ Y + GN K M K D W
Sbjct: 581 WKL--------FDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIW 632
Query: 368 TTMIS---CYEGSVLPDKAVETYQMMEAEGS 395
++S + L +K E +E E +
Sbjct: 633 GALLSGCRIHHDVELAEKVAEHIFELEPENT 663
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T SVL CA L +L+ G ++H + G+ ++ L+ MY C + K +F I
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
+ + W ++ E++ F KM L ++ +S T +L A + K
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECK 178
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+H + L++G + N+L+ Y +CG ++ A F+ ++RDV +WN +++G G
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
Query: 579 QGALAEEFFRKMID 592
EFF +M++
Sbjct: 239 FSRNGLEFFIQMLN 252
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T S+L CA + +L GK +H+ G+A D L L+ MYV CG + F+
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118
Query: 561 ERD-VSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
D + WN+L++ YA+ G N+R+ +GLF K Q
Sbjct: 119 LNDKIFLWNLLMSEYAKIG-----------------NYRESVGLFEKMQ 150
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 306/538 (56%), Gaps = 4/538 (0%)
Query: 54 NTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
NT+ T+N N+++N+ C G L A++ L + + ++ + ++++LC K+ ++
Sbjct: 55 NTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLED 112
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HSV+ + LG + M+V GDL +F K+ + +F WN+L+ YAK
Sbjct: 113 GKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 172
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G F E++SL+++M +G V + YTF CVL+ + +K K VH +V++ G+ ++
Sbjct: 173 IGNFRESVSLFKKMQKLG-VVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 231
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
VVN+LI Y K G + A +FD + + D +SWN+MI+G NG GL +FI M +
Sbjct: 232 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 291
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+ D TL SV+ A +G+ LGR +HG+ +K FS++V N L+ MY GN
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF +M +VSWT++I+ Y L A+ + M+++G PD T+ S++ ACAC
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+LD G +H ++ G+ S + + N LI+MY+KC +++A VF +IP K+++SW ++I
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
G N EAL F M KP+ +T+ +L ACA + AL G+EIH H LR G D
Sbjct: 472 GYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 531
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AL+DMY +CG + A F+ ++D+ +W +++ GY G G A F +M
Sbjct: 532 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 589
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 271/527 (51%), Gaps = 8/527 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++E G+ +++ MQ+L + + +++ E +H V K
Sbjct: 164 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 223
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ ++ + KFG + A +F ++ + D+ SWN +I G GF L +
Sbjct: 224 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M +G V+ D+ T VL C + +L G+ +H ++ + +V N L+ MY
Sbjct: 284 FIQMLILG-VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 342
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L A VF M +SW ++I+ Y G Y + LF M+ V PD T++S
Sbjct: 343 KCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 402
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A GR+VH YVIK G ++ V N LI MY G+ EE VFS++ KD
Sbjct: 403 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKD 462
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW TMI Y ++LP++A+E + M+ + PD+IT+A VL ACA L LD G ++H
Sbjct: 463 IVSWNTMIGGYSQNLLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREIHG 521
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G S + +A L+DMY+KC + A +F IP K++ISWT +I G ++ E
Sbjct: 522 HILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNE 581
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--AL 540
A+ F +M + ++P+ + +IL+AC+ G L G + +++R + L + +
Sbjct: 582 AISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFF-NSMRNECGVEPKLEHYACV 640
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+D+ R G + A+ S + D + W +LL+G LAE+
Sbjct: 641 VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 687
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVL CA +L+ G ++H + + G+ + L+ MY C + + ++F +I +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
V W ++ E++ F+KM L + N T +L A +G + K +H
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ L++G + + N+L+ Y + G ++ A N F+ +E DV +WN ++ G G
Sbjct: 219 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278
Query: 582 LAEEFFRKMI 591
E F +M+
Sbjct: 279 NGLEIFIQML 288
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 306/538 (56%), Gaps = 4/538 (0%)
Query: 54 NTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
NT+ T+N N+++N+ C G L A++ L + + ++ + ++++LC K+ ++
Sbjct: 330 NTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLED 387
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HSV+ + LG + M+V GDL +F K+ + +F WN+L+ YAK
Sbjct: 388 GKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 447
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G F E++SL+++M +G V + YTF CVL+ + +K K VH +V++ G+ ++
Sbjct: 448 IGNFRESVSLFKKMQKLG-VVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 506
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
VVN+LI Y K G + A +FD + + D +SWN+MI+G NG GL +FI M +
Sbjct: 507 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 566
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+ D TL SV+ A +G+ LGR +HG+ +K FS++V N L+ MY GN
Sbjct: 567 VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF +M +VSWT+ I+ Y L A+ + M+++G PD T+ S++ ACAC
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+LD G +H ++ G+ S + + N LI+MY+KC +++A VF +IP K+++SW ++I
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
G N+ EAL F M KP+ +T+ +L ACA + AL G+EIH H LR G D
Sbjct: 747 GYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 806
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AL+DMY +CG + A F+ ++D+ +W +++ GY G G A F +M
Sbjct: 807 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 864
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/526 (30%), Positives = 264/526 (50%), Gaps = 6/526 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++E G+ +++ MQ+L + + +++ E +H V K
Sbjct: 439 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 498
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ ++ + KFG + A +F ++ + D+ SWN +I G GF L +
Sbjct: 499 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 558
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + GV+ D+ T VL + +L G+ +H ++ + +V N L+ MY
Sbjct: 559 FIQML-ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYS 617
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L A VF M +SW + I+ Y G Y + LF M+ V PD T++S
Sbjct: 618 KCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTS 677
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A GR+VH YVIK G ++ V N LI MY G+ EE VFS++ KD
Sbjct: 678 IVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKD 737
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW TMI Y + LP++A+E + M+ + PD+IT+A VL ACA L LD G ++H
Sbjct: 738 IVSWNTMIGGYSQNSLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREIHG 796
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G S + +A L+DMY+KC + A +F IP K++ISWT +I G ++ E
Sbjct: 797 HILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNE 856
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALL 541
A+ F +M + ++P+ + IL+AC+ G L G K ++ GV ++
Sbjct: 857 AISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVV 916
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
D+ R G + A+ S + D + W +LL+G LAE+
Sbjct: 917 DLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 962
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVL CA +L+ G ++H + + G+ + L+ MY C + + ++F +I +
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
V W ++ E++ F+KM L + N T +L A +G + K +H
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ L++G + + N+L+ Y + G ++ A N F+ +E DV +WN ++ G G
Sbjct: 494 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553
Query: 582 LAEEFFRKMI 591
E F +M+
Sbjct: 554 NGLEIFIQML 563
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 301/560 (53%), Gaps = 19/560 (3%)
Query: 44 AQSVQVLNTQNTSSIATKNP--------NSRLNELCLNGSLEQALKYLDSMQELNICVDE 95
A S Q L + A K+P N + LC +G LE+AL L S VD+
Sbjct: 37 APSGQALEAAASPRGAEKSPDWVPTSDVNLHIQRLCRSGDLEEALGLLGSDG-----VDD 91
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKT---MSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+ +++LC R + G H +V + + LG + M++K GDL +A V
Sbjct: 92 RSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRV 151
Query: 153 FGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F +M D+ W L+ GYAKAG E + L+++M G V+PD YT CVL+ G+
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCG-VRPDAYTISCVLKCIAGLG 210
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G+ VH + + G+ + V NAL+ Y K A LVFDGMP RD ISWN+MIS
Sbjct: 211 SIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMIS 270
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G NG Y K + LF+ M + D TL SV+ A + LGR VHGY +K GF
Sbjct: 271 GCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFIS 330
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
S+ N L+ MY + + K+F M K+VVSWT MI+ Y + L DK +Q M
Sbjct: 331 QTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMG 390
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG+ PD I S L A A L G +H A+R G+ + + N L++MY KC ++
Sbjct: 391 LEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNME 450
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
+A +F + K++ISW ++I G NN + EA F +M+L L+PN+VT+ IL A A
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAAS 510
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ +L G+E+HA+ALR G D F+ NAL+DMYV+CG + A F+ + +++ +W I+
Sbjct: 511 LSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIM 570
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ GY G+G A F +M
Sbjct: 571 VAGYGMHGRGRDAIALFEQM 590
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 250/488 (51%), Gaps = 12/488 (2%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
++G +H ++ K +GNA ++ + K A VF M RD+ SWN +I G
Sbjct: 213 EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGC 272
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
G +D+A+ L+ RM W+ G + D T VL C + L G+ VH + ++ G+ +
Sbjct: 273 TSNGLYDKAIELFVRM-WLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQ 331
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ N L+ MY C D +F M +++ +SW AMI+ Y G Y K LF M
Sbjct: 332 TSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGL 391
Query: 292 VLVDPDFMTLSSVISASELVGDE--KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
PD ++S + A G+E K G+ VHGY I+ G ++V N L++MY+ GN
Sbjct: 392 EGTRPDIFAITSALHA--FAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE + +F + SKD++SW T+I Y + L ++A + M + P+ +T+ +L A
Sbjct: 450 EEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAA 508
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L +L+ G ++H A+R G + +AN LIDMY KC + A +F ++ +KN+ISWT
Sbjct: 509 ASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWT 568
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++ G ++ R +A+ F +M ++ + P++ + +IL AC+ G G A+R
Sbjct: 569 IMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFF-DAMRK 627
Query: 529 GVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
+ L + ++D+ + G +K A+ +S E D S W LL G LAE
Sbjct: 628 EHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAE 687
Query: 585 EFFRKMID 592
E ++ +
Sbjct: 688 EVAERVFE 695
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 302/532 (56%), Gaps = 7/532 (1%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+ + ++ E C G L+ A++ L S Q N D A ++++LC ++ +G + S++
Sbjct: 119 DSSRKIVEFCEVGDLKNAMELLCSSQNSNF--DLGAYCSILQLCAERKSIRDGRRVRSII 176
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ + LG + M+VK GDL VF K+ + +F WN++I Y+ +G + E++
Sbjct: 177 ESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESI 236
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+L+++M +G +KP+ YTF +L+ V ++ G++VH + + G+ + VVN+LI+
Sbjct: 237 NLFKQMLELG-IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 295
Query: 242 YVKCGDLVR-ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y G VR A+ +FD + RD ISWN+MISGY +NG +G+ +FI M VD D T
Sbjct: 296 YF-VGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLAT 354
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+ +V A +G LG+ +H Y IK D +V N L+ MY G+ +VF RM
Sbjct: 355 MVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERM 414
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ K VVSWT+MI+ Y L D A++ + M++ G +PD + S+L+ACA GNL G
Sbjct: 415 DEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK 474
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H L + ++N L DMY+KC + A +VF + K+VISW ++I G N+
Sbjct: 475 IVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNS 534
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EAL F +M KP+ T+ IL ACA + AL G+EIH +ALR G + D ++ NA
Sbjct: 535 LPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNA 594
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++DMYV+CG + A + F+ +D+ +W +++ GY G G+ A F +M
Sbjct: 595 VVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQM 646
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 272/535 (50%), Gaps = 9/535 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++E +G+ +++ M EL I + ++++ +EG +H ++ K
Sbjct: 220 NLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICK 279
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ +S + + A +F ++ DRD+ SWN +I GY K G D + +
Sbjct: 280 LGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEI 339
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+ +M V GV D+ T V C + L GK +H + I+ + +V N L+ MY
Sbjct: 340 FIKML-VFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMY 398
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL A VF+ M ++ +SW +MI+GY G + LF M+ V PD ++
Sbjct: 399 SKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT 458
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S+++A + G+ K G+ VH Y+ + + V N L MY G+ ++ VFS M+ K
Sbjct: 459 SILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK 518
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DV+SW TMI Y + LP++A+ + M+ E S PD T+A +L ACA L LD G ++H
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRE-SKPDGTTVACILPACASLAALDKGREIH 577
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A+R G + N ++DMY KC + A +F IP+K+++SWT +I G ++
Sbjct: 578 GYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGS 637
Query: 483 EALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--A 539
EA+ F +M M ++P+ V+ +SIL AC+ G L G +I + ++ + L +
Sbjct: 638 EAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF-NIMKKECQIEPNLEHYAC 696
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D+ R G + A + + D + W LL G LAE+ ++ +
Sbjct: 697 MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFE 751
>gi|255562460|ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538489|gb|EEF40094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 315/584 (53%), Gaps = 11/584 (1%)
Query: 12 TPLRQNLRNPKTRIPETSFYFKP--KTRHFSSKNAQSVQVLNTQNTSS----IATKNPNS 65
+P +N R T+ + + KP K+ SS S L+ ++ + + N
Sbjct: 12 SPHNKNHRESSTKFQSSLLFTKPYPKSNFLSSSLHSSYATLSIFSSPAKEEDFKIADFNR 71
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
++ ELC GSL+ A++ LD + NI D + ++++LC EG +HS +S +
Sbjct: 72 KICELCEVGSLKNAIELLDMYPKSNI--DSNTYCSILQLCAELNSLQEGKKVHSFISSSG 129
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ LG + M+V GD+ +F K+ + +F WN+++ GYAK G F+E++ L++
Sbjct: 130 IFVDGLLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFR 189
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+M +G ++ + +T C+L+ + +K G+ VH ++++ G+ + VVN+LI+ Y K
Sbjct: 190 KMLDLG-IQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKT 248
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
+ A VFD + RD +SWN+MISG N KG+ +F M + V D +TL +V+
Sbjct: 249 RKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVL 308
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+A G+ LGR +H + IK ++ N L+ MY G+ +VF +M + VV
Sbjct: 309 AACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERSVV 368
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWT++I+ Y L + + + ME EG PD T+ +VL ACAC G+L++G +H
Sbjct: 369 SWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLEIGKDVHDYV 428
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ I+ N+L+DMY+KC ++ A VF ++P+K+++SW ++I G N R E L
Sbjct: 429 KENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETL 488
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F M+ LKP+ T+ IL ACA + AL G+EIH + R G D + NAL+DMY
Sbjct: 489 HLFVAMVQELKPDGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHVANALIDMYA 548
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTG-YAERGQGALAEEFF 587
+CG + A F+ +D+ +W +++ G ERG + F
Sbjct: 549 KCGALALARLFFDMIPVKDLISWTVMIAGDIDERGICKIGRALF 592
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 163/327 (49%), Gaps = 4/327 (1%)
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+N I E G + L M + +D + T S++ + + G++VH ++
Sbjct: 69 FNRKICELCEVGSLKNAIELLDMYPKSNIDSN--TYCSILQLCAELNSLQEGKKVHSFIS 126
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
G D + L+ MY++ G+ EG +F ++ ++ V W M+S Y +++V
Sbjct: 127 SSGIFVDGLLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVY 186
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
++ M G + T++ +L A LG++ G +H ++ G SY + N+LI Y
Sbjct: 187 LFRKMLDLGIQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYF 246
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
K + I+ A EVF ++ +++++SW S+I G N+ + + F++M+ L + + VTLV+
Sbjct: 247 KTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVN 306
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+L+ACA G G+ +HA A++ + N LLDMY +CG + A F ER
Sbjct: 307 VLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERS 366
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKM 590
V +W L+ GYA G F +M
Sbjct: 367 VVSWTSLIAGYAREGLSGEGIRLFHEM 393
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D T S+L CA L +L G K+H +G+ ++ L+ MY C I + +F
Sbjct: 98 DSNTYCSILQLCAELNSLQEGKKVHSFISSSGIFVDGLLGTKLVFMYVNCGDIREGRVIF 157
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
+I ++ V W ++ G E++ FRKM+ L ++ NS T+ IL A +G++
Sbjct: 158 DKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALGSVK 217
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+ +H + L++G + N+L+ Y + +++ A+ F+ RD+ +WN +++G
Sbjct: 218 EGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTV 277
Query: 576 ERGQGALAEEFFRKMI 591
+ F++M+
Sbjct: 278 ANDLPEKGIQVFKEML 293
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 492 MLNLKP----NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+L++ P +S T SIL CA + +L GK++H+ G+ DG L L+ MYV C
Sbjct: 88 LLDMYPKSNIDSNTYCSILQLCAELNSLQEGKKVHSFISSSGIFVDGLLGTKLVFMYVNC 147
Query: 548 GRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G ++ F+ +NE+ V WN++L+GYA+ G + FRKM+D
Sbjct: 148 GDIREGRVIFDKIANEK-VFLWNLMLSGYAKIGAFEESVYLFRKMLD 193
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 247/432 (57%), Gaps = 3/432 (0%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W I GY K GF+++AL LY +M G+ PD F V++ CG DL+ G++VH +
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRT-GINPDKLVFLSVIKACGSQSDLQAGRKVHEDI 146
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
I G+E+DV V AL +MY KCG L AR VFD MPKRD +SWNA+I+GY +NG+ + L
Sbjct: 147 IARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEAL 206
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF M+ + P+ TL SV+ + + G+++H Y I+ G DV V N L+ MY
Sbjct: 207 ALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY 266
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
GN K+F RM +DV SW +I Y + +A+ + M+ G P+ IT+
Sbjct: 267 AKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMV 326
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVL ACA L L+ G ++H A+R+G S ++ N L++MY+KC ++ A ++F ++P K
Sbjct: 327 SVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK 386
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH 522
NV++W +II G + EAL F +M +KP+S +VS+L ACA AL GK+IH
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIH 446
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ +R G + + L+D+Y +CG + A F E+DV +W ++ Y G G
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGE 506
Query: 582 LAEEFFRKMIDS 593
A F KM ++
Sbjct: 507 DALALFSKMQET 518
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 287/546 (52%), Gaps = 13/546 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ MQ I D+ +++++ C + G +H + V +
Sbjct: 98 NGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIV 157
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A SM+ K G L +A VF +M RD+ SWN +I GY++ G EAL+L+ M V G
Sbjct: 158 GTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEM-QVNG 216
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T V+ C + L++GK++H + IR G E+DV VVN L+ MY KCG++ A
Sbjct: 217 IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAH 276
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ MP RD SWNA+I GY N ++ + L F M+ + P+ +T+ SV+ A +
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+++HGY I+ GF + V N L+ MY GN K+F RM K+VV+W +IS
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y P +A+ + M+A+G PD I SVL ACA L+ G ++H +R+G S
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+++ L+D+Y+KC ++ A ++F ++P+++V+SWT++IL ++ +AL F KM
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516
Query: 493 -LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
K + + +IL+AC+ G + G + G+A L+D+ R G +
Sbjct: 517 ETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHL 576
Query: 551 KPAWNQFNSN---ERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMG 602
A N N E D + W LL E G+ A A+ F D+ G + L
Sbjct: 577 DEA-NGIIKNMSLEPDANVWGALLGACRIHCNIELGEQA-AKHLFELDPDNAGYYVLLSN 634
Query: 603 LFRKCQ 608
++ + Q
Sbjct: 635 IYAEAQ 640
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 198/333 (59%), Gaps = 2/333 (0%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ + + W I GY +NG + K L L+ M+ ++PD + SVI A D + GR+
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VH +I GF DV V L MY G+ E +VF RM +DVVSW +I+ Y +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
P +A+ + M+ G P+ T+ SV+ CA L L+ G ++H A+R+G+ S +++ N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPN 498
L++MY+KC ++ A ++F ++P ++V SW +II G LN++ EAL FF +M + +KPN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
S+T+VS+L ACA + AL G++IH +A+R G + + NAL++MY +CG + A+ F
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+++V AWN +++GY++ G A F +M
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEM 414
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + LN +AL + + MQ I + +V+++ C ++G +H +
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIR 350
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +GNA ++M+ K G++ A+ +F +M +++ +WN +I GY++ G EAL+L
Sbjct: 351 SGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALAL 410
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+KPD + VL C L++GK++H + IR G+E++V V L+ +Y
Sbjct: 411 FIEM-QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYA 469
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ A+ +F+ MP++D +SW MI Y +G L LF M+E D + ++
Sbjct: 470 KCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTA 529
Query: 304 VISASELVG 312
+++A G
Sbjct: 530 ILTACSHAG 538
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 262/457 (57%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F KFG L A VF + D+ ++ ++ GYA+ D+A+S + RM + GV+P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRY-DGVRP 173
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG DL++GKE+H +I G+ ++V + ++ MY KC + A +F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD + WN +ISGY +NG L L + M+E PD +T+ S++ A VG +
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+GR +HGY ++ GF V+V L+ MY G+ +F RM K VVSW +MI Y
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P A+E +Q M E +T+ L ACA LG+++ G +H+L + L S +
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ N+LI MYSKCK +D A E+F + K ++SW ++ILG N R EA+ +F KM L N
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN 473
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP+S T+VS++ A A + L K IH +R + + F+ AL+DMY +CG + A
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTAR 533
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +ER V+ WN ++ GY G G A E F KM
Sbjct: 534 KLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKM 570
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 251/489 (51%), Gaps = 11/489 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS--VVSKTMSHLSV 130
N SL+ A+ + M+ + L+++C +G +H +V+ S++
Sbjct: 153 NSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFA 212
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
G ++M+ K + A+ +F +M +RDL WN +I GYA+ GF AL L RM
Sbjct: 213 MTG--VVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRM-QE 269
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G +PD T +L V L+ G+ +H + +R G+E+ V+V AL+ MY KCG +
Sbjct: 270 EGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGT 329
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARL+FD M + +SWN+MI GY +NG+ + +F M + V+ +T+ + A
Sbjct: 330 ARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACAD 389
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+GD + GR VH + ++ DVSV N LI MY + ++F ++ K +VSW M
Sbjct: 390 LGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAM 449
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y + ++A++ + M+ + PD T+ SV+ A A L L +H L +RT L
Sbjct: 450 ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +A L+DMY+KC + A ++F + +++V +W ++I G + AL F K
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNALLDMYVR 546
M +KPN VT + +LSAC+ G + G + + + A D + A++D+ R
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY--GAMVDLLGR 627
Query: 547 CGRMKPAWN 555
R+ AW+
Sbjct: 628 ANRLNEAWD 636
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 205/404 (50%), Gaps = 11/404 (2%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ VY P +L C + +L + + +I+ G ++ L++++ K G L
Sbjct: 71 IPSHVYKHPSAILLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHE 127
Query: 251 ARLVFDGMPKRDRIS--WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF P D+I ++ M+ GY N + F MR V P + ++
Sbjct: 128 AARVFQ--PIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVC 185
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
D + G+E+H +I GF+ +V ++ MY EE K+F RM +D+V W
Sbjct: 186 GDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWN 245
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T+IS Y + A+E M+ EG PD ITI S+L A A +G+L +G +H +MR
Sbjct: 246 TIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRA 305
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G S++ ++ L+DMYSKC + A +F ++ K V+SW S+I G N A+ F
Sbjct: 306 GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIF 365
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KMM ++ +VT++ L ACA +G + G+ +H ++ + D + N+L+ MY +C
Sbjct: 366 QKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKC 425
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+ A F N + + +WN ++ GYA+ G+ A ++F KM
Sbjct: 426 KRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 2/412 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG + AL+ + MQE D +V+++ G +H +
Sbjct: 245 NTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMR 304
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + A + M+ K G +G A +F +M + + SWN +I GY + G A+ +
Sbjct: 305 AGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEI 364
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q+M V+ T L C + D+++G+ VH + + +DV V+N+LI+MY
Sbjct: 365 FQKMM-DEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 423
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A +F+ + + +SWNAMI GY +NG + + F M+ + PD T+ S
Sbjct: 424 KCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVS 483
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
VI A + + +HG VI+ +V V L+ MY G K+F M+ +
Sbjct: 484 VIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH 543
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
V +W MI Y L A+E ++ M+ E P+E+T VLSAC+ G ++ G +
Sbjct: 544 VTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFG 603
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ GL + ++D+ + +++A + ++P + IS +LG
Sbjct: 604 SMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLG 655
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 11/299 (3%)
Query: 318 REVHGYV---IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+E+H ++ IK G + L+ ++ FG+ E +VF +E K + TM+ Y
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ D AV + M +G P +L C +L G ++H + G S +
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+++MY+KC+ +++A ++F ++P+++++ W +II G N AL +M
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270
Query: 495 LK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL--PNALLDMYVRCGRMK 551
K P+S+T+VSIL A A +G+L G+ IH +++R G F+ F+ AL+DMY +CG +
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAG--FESFVNVSTALVDMYSKCGSVG 328
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK--LMGLFRKC 607
A F+ + V +WN ++ GY + G A E F+KM+D + +MG C
Sbjct: 329 TARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHAC 387
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 294/548 (53%), Gaps = 3/548 (0%)
Query: 45 QSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL 104
++ QV N N + + N+ + G +E+ALK L MQ+ + + + L+
Sbjct: 194 EARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C+ + G +H K V + N L+M+ K G + A VF KM + + SW
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSW 313
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
++IGGYA G + A ++Q+M GV P+ T+ VL G LK GK VH H++
Sbjct: 314 TIIIGGYADCGHSEIAFEIFQKM-QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHIL 372
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G+E+D+ V AL+ MY KCG R VF+ + RD I+WN MI G E G + +
Sbjct: 373 NAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASE 432
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
++ M+ + P+ +T +++A GRE+H V+K GF D+SV N LI MY
Sbjct: 433 IYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA 492
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ ++ +F++M KD++SWT MI S L +A+ +Q M+ G P+ +T S
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L+AC+ LD G ++HQ + GL + +ANTL++MYS C + A +VF ++ ++
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
++++ ++I G +N EAL F ++ LKP+ VT +++L+ACA G+L KEIH+
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
L+ G D L NAL+ Y +CG A F+ +R+V +WN ++ G A+ G+G
Sbjct: 673 LVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQD 732
Query: 583 AEEFFRKM 590
+ F +M
Sbjct: 733 VLQLFERM 740
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 276/518 (53%), Gaps = 5/518 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A+ + +Q+ V+ + +++ C + G +H + + + L NA
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 137 LSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
++M+++ G + A V+ K+ +R + SWN ++ GY + G+ +EAL L + M G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
T +L +C L+ G+E+HV ++ DV+V N ++ MY KCG + AR V
Sbjct: 243 GRATTMR-LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M + +SW +I GY + G +F M++ V P+ +T +V++A
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K G+ VH +++ G D++V L+KMY G+ ++ +VF ++ ++D+++W TMI
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++A E Y M+ EG MP++IT +L+AC L G ++H ++ G + I
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ N LI MY++C I A +F+++ K++ISWT++I GL + EAL F+ M
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
LKPN VT SIL+AC+ AL G+ IH + G+A D + N L++MY CG +K A
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDA 601
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +RD+ A+N ++ GYA G A + F ++
Sbjct: 602 RQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRL 639
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 244/447 (54%), Gaps = 2/447 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A + MQ+ + + +N++ G +HS + + +G
Sbjct: 324 GHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVG 383
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K G VF K+ +RDL +WN +IGG A+ G ++EA +Y +M G+
Sbjct: 384 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM-QREGM 442
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T+ +L C L G+E+H V++ G+ D+ V NALI+MY +CG + ARL
Sbjct: 443 MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL 502
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ M ++D ISW AMI G ++G + L +F M++ + P+ +T +S+++A
Sbjct: 503 LFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR +H VI+ G + D V N L+ MY G+ ++ +VF RM +D+V++ MI
Sbjct: 563 LDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGG 622
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L +A++ + ++ EG PD++T ++L+ACA G+L+ ++H L ++ G +S
Sbjct: 623 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSD 682
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ N L+ Y+KC AL VF ++ +NVISW +II G + R + L F +M M
Sbjct: 683 TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKM 742
Query: 493 LNLKPNSVTLVSILSACARIGALMCGK 519
+KP+ VT VS+LSAC+ G L G+
Sbjct: 743 EGIKPDIVTFVSLLSACSHAGLLEEGR 769
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 281/504 (55%), Gaps = 7/504 (1%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNAFLSMFVKFGDLGHAWYVF 153
+ A + LC + +G LH+ KT ++L SV L F+ M+ K G A VF
Sbjct: 46 QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
KM +R +F+WN +IG AG + EA+ LY+ M V GV D +TFPCVL+ CG +
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEM-RVLGVSLDAFTFPCVLKACGAFKER 164
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMIS 271
+ G E+H ++ GY V V NALI MY KCGDL AR++FD M K D +SWN++IS
Sbjct: 165 RLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIIS 224
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
+ GE ++ L LF M+EV V+ + T S + A E K+GR +H ++K
Sbjct: 225 AHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFT 284
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
DV V N LI MY + G E+ E+VF M KD VSW T++S + + A+ +Q M+
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD++++ ++++A NL G+++H A++ G+ S + I N+LIDMY KC C+
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
F +P+K++ISWT+II G N +AL RK+ L + + + + SIL AC+
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ + KEIH + L+ G+A D + NA++++Y + A + F S N +D+ +W
Sbjct: 465 GLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTS 523
Query: 570 LLTGYAERGQGALAEEFFRKMIDS 593
++T G A E F +I++
Sbjct: 524 MITCCVHNGLAIEALELFNSLIET 547
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 280/544 (51%), Gaps = 14/544 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G +AL MQE+ + + V+ ++ CE G +H+V+ K
Sbjct: 220 NSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILK 279
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + NA ++M+ G + A VF M +D SWN L+ G + + +A++
Sbjct: 280 SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINH 339
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q M G KPD + ++ G +L G EVH + I+ G ++++ + N+LI MY
Sbjct: 340 FQDM-QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYG 398
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + F+ MP++D ISW +I+GY +N ++ L L ++ +D D M + S
Sbjct: 399 KCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGS 458
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + EKL +E+HGYV+K G +D + + N ++ +Y + VF + SKD
Sbjct: 459 ILLACSGLKSEKLIKEIHGYVLKGGLAD-ILIQNAIVNVYGELALVDYARHVFESINSKD 517
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSWT+MI+C + L +A+E + + PD IT+ SVL A A L +L G ++H
Sbjct: 518 IVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHG 577
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G +IAN+L+DMY++C ++ A +F+ + +++I WTS+I ++ +
Sbjct: 578 FLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKD 637
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--AL 540
A+ F KM N+ P+ +T +++L AC+ G ++ GK+ H ++ + + + L
Sbjct: 638 AIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACL 696
Query: 541 LDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMI----DS 593
+D+ R ++ A++ F N E W LL L E +K++ ++
Sbjct: 697 VDLLARSNSLEEAYH-FVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN 755
Query: 594 KGNW 597
GN+
Sbjct: 756 SGNY 759
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 303/563 (53%), Gaps = 7/563 (1%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
F+ +P ++F S + ++ + A + N+++ + C G L A++ L Q+
Sbjct: 390 FFQQPSRKYFLSSYLDVPR--SSTRVGAFAKLDENTKICKFCEVGDLRNAVELLRMSQKS 447
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
+ D +A ++++LC + EG +HSV+S + LG + M+V G L
Sbjct: 448 EL--DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREG 505
Query: 150 WYVFGK-MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
+F + D +F WN+++ YAK G + E++ L+++M +G + + YTF C+L+
Sbjct: 506 RRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLG-ITGNSYTFSCILKCFA 564
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ + K +H V + G+ + VVN+LI Y K G++ A +FD + RD +SWN+
Sbjct: 565 TLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNS 624
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MISG NG L F+ M + V D TL + ++A VG LGR +HG +K
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC 684
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
FS +V N L+ MY GN + + F +M K VVSWT++I+ Y L D A+ +
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
ME++G PD ++ SVL ACAC +LD G +H + + + ++N L+DMY+KC
Sbjct: 745 EMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG 804
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSA 508
+++A VF QIP K+++SW ++I G N+ EAL F +M +P+ +T+ +L A
Sbjct: 805 SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPA 864
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C + AL G+ IH LR G + + + NAL+DMYV+CG + A F+ E+D+ W
Sbjct: 865 CGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITW 924
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
++++G G G A F+KM
Sbjct: 925 TVMISGCGMHGLGNEAIATFQKM 947
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 251/488 (51%), Gaps = 20/488 (4%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++ + K G++ A +F ++ DRD+ SWN +I G GF AL + +M + V
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR-V 650
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D+ T + C V L G+ +H ++ + +V N L+ MY KCG+L A
Sbjct: 651 GVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQ 710
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ M ++ +SW ++I+ Y G Y + LF M V PD +++SV+ A
Sbjct: 711 AFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNS 770
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR+VH Y+ K + + V N L+ MY G+ EE VFS++ KD+VSW TMI
Sbjct: 771 LDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGG 830
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + LP++A++ + M+ E S PD IT+A +L AC L L++G +H +R G S
Sbjct: 831 YSKNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSE 889
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN LIDMY KC + A +F IP+K++I+WT +I G ++ EA+ F+KM +
Sbjct: 890 LHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRI 949
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRM 550
+KP+ +T SIL AC+ G L G +++ + L + ++D+ R G +
Sbjct: 950 AGIKPDEITFTSILYACSHSGLLNEGWGFF-NSMISECNMEPKLEHYACMVDLLARTGNL 1008
Query: 551 KPAWNQFNSN--ERDVSAWNILLTG--------YAERGQGALAEEFFRKMIDSKGNWRKL 600
A+N + + D + W LL G AE+ +AE F D+ G + L
Sbjct: 1009 SKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEK----VAEHVFELEPDNAGYYVLL 1064
Query: 601 MGLFRKCQ 608
++ + +
Sbjct: 1065 ANIYAEAE 1072
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 212/422 (50%), Gaps = 12/422 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +NG AL++ M L + VD LVN V C G LH K
Sbjct: 623 NSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVK 682
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V N L M+ K G+L A F KM + + SW LI Y + G +D+A+ L
Sbjct: 683 ACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRL 742
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PDVY+ VL C L +G++VH ++ + + V NAL+ MY
Sbjct: 743 FYEM-ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYA 801
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A LVF +P +D +SWN MI GY +N + L LF M++ PD +T++
Sbjct: 802 KCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE-SRPDGITMAC 860
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + ++GR +HG +++ G+S ++ V N LI MY+ G+ +F + KD
Sbjct: 861 LLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKD 920
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG----- 418
+++WT MIS L ++A+ T+Q M G PDEIT S+L AC+ G L+ G
Sbjct: 921 LITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFN 980
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ + M L Y ++D+ ++ + KA + +P K + W +++ G R+
Sbjct: 981 SMISECNMEPKLEHYA----CMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRI 1036
Query: 478 NN 479
++
Sbjct: 1037 HH 1038
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
AVE +M ++ S D +S+L CA L G +H + G+ ++ L+
Sbjct: 437 AVELLRM--SQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVF 494
Query: 443 MYSKCKCIDKALEVF-HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
MY C + + +F H + D V W ++ E++ F+KM L + NS
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
T IL A +G + K IH ++G + N+L+ Y + G + A F+
Sbjct: 555 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+RDV +WN +++G G A EFF +M+
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQML 646
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 287/538 (53%), Gaps = 23/538 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG +AL Q + + D +++ C ++ +H V
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +F DL A VF +M RD+ SWN LI GY G+++EAL +
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y R F GV PD YT VLR CGG+ ++ G +H + + G + DV V N L++MY
Sbjct: 204 YYR-FRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC 262
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K L+ R +FD M RD +SWN MI GY + G Y + + LF+ M PD +T++S
Sbjct: 263 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KPDLLTITS 321
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A +GD + G+ VH Y+I G+ D + N LI MY GN ++VFS M+ KD
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW +MI+ Y + D+A++ ++MM+ + PD +T +LS LG+L LG +LH
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHC 440
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII----------L 473
+ G S I+++NTL+DMY+KC + +L+VF + +++I+W +II L
Sbjct: 441 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 500
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
GLR+ +R + P+ T++SIL C+ + A GKEIH ++G+ D
Sbjct: 501 GLRMISRMRTE---------GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 551
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ N L++MY +CG ++ ++ F +DV W L++ G+G A F +M
Sbjct: 552 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM 609
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 254/459 (55%), Gaps = 6/459 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAG 175
LHS++ H SV ++ + F D ++ VF +++ WN +I G
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F EALSLY + ++PD YTFP V+ C G+ D + K +H V+ G+ +D+ +
Sbjct: 95 LFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NALI MY + DL +AR VF+ MP RD +SWN++ISGY NG + + L ++ R + V
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+SSV+ A +G + G +HG + K+G DV V N L+ MY F +G ++
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F +M +D VSW TMI Y L +++++ + M + PD +TI S+L AC LG+L
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDL 332
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G +H + +G +N LI+MY+KC + + EVF + K+ +SW S+I +
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI-NV 391
Query: 476 RLNNRSF-EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+ N SF EA+ F+ M ++KP+SVT V +LS ++G L GKE+H ++G +
Sbjct: 392 YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNI 451
Query: 535 FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLT 572
+ N L+DMY +CG M + F N RD+ WN ++
Sbjct: 452 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 490
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 280/534 (52%), Gaps = 9/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL+ + L + D + +++R C +EG +H ++ K
Sbjct: 185 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 244
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N LSM+ KF L +F KM RD SWN +I GY++ G ++E++ L
Sbjct: 245 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKL 304
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V KPD+ T +L+ CG + DL+ GK VH ++I GYE D N LI MY
Sbjct: 305 FMEM--VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 362
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L+ ++ VF GM +D +SWN+MI+ Y +NG + + + LF MM+ V PD +T
Sbjct: 363 KCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVM 421
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S S +GD LG+E+H + KMGF+ ++ V N L+ MY G + KVF M+++D
Sbjct: 422 LLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARD 481
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+++W T+I+ S + + M EG PD T+ S+L C+ L G ++H
Sbjct: 482 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 541
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ GL S + + N LI+MYSKC + + +VF + K+V++WT++I + +
Sbjct: 542 CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 601
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--AL 540
A+ F +M + P+ V V+I+ AC+ G + G + H ++ + + + +
Sbjct: 602 AVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACV 660
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+D+ R + A + S + D S W LL+ G +AE ++I+
Sbjct: 661 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE 714
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 2/393 (0%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD-GM 258
F + R + ++H +I G V LI Y D + VF
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P + WN++I NG + + L L+ + + + PD T SVI+A + D ++ +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H V+ MGF D+ + N LI MY F + ++ KVF M +DVVSW ++IS Y +
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A+E Y G +PD T++SVL AC LG+++ G +H L + G+ +I+ N
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
L+ MY K + +F ++ ++ +SW ++I G E++ F +M+ KP+
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPD 315
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+T+ SIL AC +G L GK +H + + G D N L++MY +CG + + F+
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 375
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +D +WN ++ Y + G A + F+ M
Sbjct: 376 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM 408
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 287/538 (53%), Gaps = 23/538 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG +AL Q + + D +++ C ++ +H V
Sbjct: 143 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLX 202
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +F DL A VF +M RD+ SWN LI GY G+++EAL +
Sbjct: 203 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 262
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y R F GV PD YT VLR CGG+ ++ G +H + + G + DV V N L++MY
Sbjct: 263 YYR-FRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC 321
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K L+ R +FD M RD +SWN MI GY + G Y + + LF+ M PD +T++S
Sbjct: 322 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KPDLLTITS 380
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A +GD + G+ VH Y+I G+ D + N LI MY GN ++VFS M+ KD
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW +MI+ Y + D+A++ ++MM+ + PD +T +LS LG+L LG +LH
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHC 499
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII----------L 473
+ G S I+++NTL+DMY+KC + +L+VF + +++I+W +II L
Sbjct: 500 DLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 559
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
GLR+ +R + P+ T++SIL C+ + A GKEIH ++G+ D
Sbjct: 560 GLRMISRMRTE---------GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 610
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ N L++MY +CG ++ ++ F +DV W L++ G+G A F +M
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM 668
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 254/459 (55%), Gaps = 6/459 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAG 175
LHS++ H SV ++ + F D ++ VF +++ WN +I G
Sbjct: 94 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNG 153
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F EALSLY + ++PD YTFP V+ C G+ D + K +H V+ G+ +D+ +
Sbjct: 154 LFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NALI MY + DL +AR VF+ MP RD +SWN++ISGY NG + + L ++ R + V
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+SSV+ A +G + G +HG + K+G DV V N L+ MY F +G ++
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F +M +D VSW TMI Y L +++++ + M + PD +TI S+L AC LG+L
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDL 391
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G +H + +G +N LI+MY+KC + + EVF + K+ +SW S+I +
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI-NV 450
Query: 476 RLNNRSF-EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+ N SF EA+ F+ M ++KP+SVT V +LS ++G L GKE+H ++G +
Sbjct: 451 YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNI 510
Query: 535 FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLT 572
+ N L+DMY +CG M + F N RD+ WN ++
Sbjct: 511 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 549
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 280/534 (52%), Gaps = 9/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL+ + L + D + +++R C +EG +H ++ K
Sbjct: 244 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 303
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N LSM+ KF L +F KM RD SWN +I GY++ G ++E++ L
Sbjct: 304 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKL 363
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V KPD+ T +L+ CG + DL+ GK VH ++I GYE D N LI MY
Sbjct: 364 FMEM--VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 421
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L+ ++ VF GM +D +SWN+MI+ Y +NG + + + LF MM+ V PD +T
Sbjct: 422 KCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVM 480
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S S +GD LG+E+H + KMGF+ ++ V N L+ MY G + KVF M+++D
Sbjct: 481 LLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARD 540
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+++W T+I+ S + + M EG PD T+ S+L C+ L G ++H
Sbjct: 541 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 600
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ GL S + + N LI+MYSKC + + +VF + K+V++WT++I + +
Sbjct: 601 CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 660
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--AL 540
A+ F +M + P+ V V+I+ AC+ G + G + H ++ + + + +
Sbjct: 661 AVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACV 719
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+D+ R + A + S + D S W LL+ G +A+ ++I+
Sbjct: 720 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE 773
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 2/393 (0%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD-GM 258
F + R + ++H +I G V LI Y D + VF
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P + WN++I NG + + L L+ + + + PD T SVI+A + D ++ +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H V+ MGF D+ + N LI MY F + ++ KVF M +DVVSW ++IS Y +
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A+E Y G +PD T++SVL AC LG+++ G +H L + G+ +I+ N
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
L+ MY K + +F ++ ++ +SW ++I G E++ F +M+ KP+
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPD 374
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+T+ SIL AC +G L GK +H + + G D N L++MY +CG + + F+
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 434
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +D +WN ++ Y + G A + F+ M
Sbjct: 435 GMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM 467
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 282/529 (53%), Gaps = 3/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L +G +A + M+ + ++ ++++ C + + G +HS +S+
Sbjct: 299 NALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE 358
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V++GNA +SM+ + GDL A +F M RDL SWN +I GYA+ EA+ L
Sbjct: 359 DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRL 418
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y++M GVKP TF +L C GK +H ++R G +++ + NAL+ MY
Sbjct: 419 YKQM-QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG L+ A+ VF+G RD ISWN+MI+G+ ++G Y LF M+ ++PD +T +S
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+S + +LG+++HG + + G DV++ N LI MY+ G+ ++ VF ++ +D
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SWT MI KA+E + M+ EG P + T +S+L C LD G K+
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIA 657
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +G + N LI YSK + A EVF ++P ++++SW II G N
Sbjct: 658 YILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQT 717
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ F +M ++ PN + VS+L+AC+ AL GK +HA ++ + D + AL+
Sbjct: 718 AVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALIS 777
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG A F N E++V WN ++ YA+ G + A FF M
Sbjct: 778 MYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCM 826
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 262/494 (53%), Gaps = 3/494 (0%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V L++ C KR E +H+ + + + L N ++M+VK + A VF +M
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RD+ SWN LI YA+ GF +A L++ M G + P+ T+ +L C +L+ GK+
Sbjct: 91 RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI-PNKITYISILTACYSPAELENGKK 149
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H +I+ GY+ D V N+L++MY KCGDL RAR VF G+ RD +S+N M+ Y +
Sbjct: 150 IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAY 209
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L LF M + PD +T +++ A G+ +H ++ G + D+ V
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ M + G+ + ++ F +DVV + +I+ +A E Y M ++G +
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T S+L+AC+ L+ G +H G S + I N LI MY++C + KA E+F+
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+P +++ISW +II G EA+ +++M +KP VT + +LSACA A
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
GK IH LR G+ +G L NAL++MY RCG + A N F + RDV +WN ++ G+A+
Sbjct: 450 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509
Query: 577 RGQGALAEEFFRKM 590
G A + F++M
Sbjct: 510 HGSYETAYKLFQEM 523
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 266/529 (50%), Gaps = 3/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L +++ L M I D+ +NL+ DEG +H + +
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +R+G A ++M V+ GD+ A F DRD+ +N LI A+ G EA
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y RM GV + T+ +L C L+ GK +H H+ G+ +DV + NALI+MY
Sbjct: 318 YYRM-RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CGDL +AR +F MPKRD ISWNA+I+GY + + + L+ M+ V P +T
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA G+ +H +++ G + + N L+ MY G+ E + VF +++D
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SW +MI+ + + A + +Q M+ E PD IT ASVLS C L+LG ++H
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+GL + + N LI+MY +C + A VFH + ++V+SWT++I G +
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ F +M +P T SIL C L GK++ A+ L G D + NAL+
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y + G M A F+ RD+ +WN ++ GYA+ G G A EF +M
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM 725
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 274/529 (51%), Gaps = 3/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G ++A + + MQ ++ ++++ C + G +HS + K
Sbjct: 97 NSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIK 156
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
R+ N+ LSM+ K GDL A VF + RD+ S+N ++G YA+ + E L L
Sbjct: 157 AGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGL 216
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G+ PD T+ +L L GK +H + G +D+ V AL+TM V
Sbjct: 217 FGQMS-SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CGD+ A+ F G RD + +NA+I+ ++G ++ + MR V + T S
Sbjct: 276 RCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + G+ +H ++ + G S DV + N LI MY G+ + ++F M +D
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW +I+ Y +A+ Y+ M++EG P +T +LSACA G +H+
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R+G+ S +AN L++MY +C + +A VF ++VISW S+I G +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F++M L+P+++T S+LS C AL GK+IH G+ D L NAL++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY+RCG ++ A N F+S RDV +W ++ G A++G+ A E F +M
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM 624
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 257/518 (49%), Gaps = 17/518 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ MQ + ++L+ C Y +G +H + ++ + L NA +
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ + G L A VF RD+ SWN +I G+A+ G ++ A L+Q M ++PD
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM-QNEELEPDN 532
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF VL C L+ GK++H + G + DV++ NALI MY++CG L AR VF
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV--ISASELVGDEK 315
+ RD +SW AMI G + GE MK + LF M+ P T SS+ + S DE
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDE- 651
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++V Y++ G+ D V N LI Y G+ + +VF +M S+D+VSW +I+ Y
Sbjct: 652 -GKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYA 710
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ L AVE M+ + +P++ + S+L+AC+ L+ G ++H ++ L +
Sbjct: 711 QNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVR 770
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ LI MY+KC +A EVF I +KNV++W ++I + + +AL FF M
Sbjct: 771 VGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEG 830
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGR 549
+KP+ T SILSAC G ++ G +I + + G LP L+ + R R
Sbjct: 831 IKPDGSTFTSILSACNHAGLVLEGYQIFSSM----ESEYGVLPTIEHYGCLVGLLGRARR 886
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+ A N D + W LL G ALAE
Sbjct: 887 FQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEH 924
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 205/394 (52%), Gaps = 2/394 (0%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T+ +L+ C L K +H ++ D+ + N LI MYVKC ++ A VF M
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P+RD ISWN++IS Y + G K LF M+ P+ +T S+++A + + G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +IK G+ D V N L+ MY G+ +VF+ + +DVVS+ TM+ Y
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ + + M +EG PD++T ++L A LD G ++H+L + GL S I +
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKP 497
L+ M +C +D A + F D++V+ + ++I L + + EA ++R +
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N T +SIL+AC+ AL GK IH+H G + D + NAL+ MY RCG + A F
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +RD+ +WN ++ GYA R A +++M
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 209/417 (50%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +GS E A K MQ + D +++ C+ + G +H +++
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L V LGNA ++M+++ G L A VF + RD+ SW +IGG A G +A+ L
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G +P TF +L+ C L GK+V +++ GYE D V NALI+ Y
Sbjct: 621 FWQM-QNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYS 679
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + AR VFD MP RD +SWN +I+GY +NG + M+E V P+ + S
Sbjct: 680 KSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVS 739
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + G+ VH ++K DV V LI MY G++ E ++VF + K+
Sbjct: 740 LLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKN 799
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VV+W MI+ Y L KA+ + ME EG PD T S+LSAC G + G ++
Sbjct: 800 VVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFS 859
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ G++ I L+ + + + +A + +Q+P + W +++ R++
Sbjct: 860 SMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 916
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T ++L C L ++H + + I ++N LI+MY KC+ + A +VF
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
++P ++VISW S+I +A F +M PN +T +SIL+AC L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
GK+IH+ ++ G D + N+LL MY +CG + A F + RDV ++N +L YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 576 ERG 578
++
Sbjct: 206 QKA 208
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 275/521 (52%), Gaps = 4/521 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +AL + I ++ + +++ C EGL LH+ + + V +
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLV 339
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA +SM+ + G L +A VF + + +WN +I GY + G +EA L+ R G
Sbjct: 340 GNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLF-RAMEQKG 397
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD +T+ +L C DL RGKE+H + G++ D+ V ALI+MY KCG AR
Sbjct: 398 FQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEAR 457
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ MP+R+ ISWNA IS + + F MR V+PD +T +++++
Sbjct: 458 KVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPE 517
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + GR +HG + + G + V N LI MY GN + +VF R+ +D+ SW MI+
Sbjct: 518 DLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIA 577
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
A + ++ +EG D+ T +VL A A L +LD G +H L + G
Sbjct: 578 ANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGK 637
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + TLI MYSKC + A VF + +K+V+ W +++ ++R +AL F++M
Sbjct: 638 DIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQ 697
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L + P+S T + L+ACAR+ A+ GK+IHA G+ D + N+L++MY RCG +
Sbjct: 698 LEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLC 757
Query: 552 PAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F RD+++WN L+ GY + GQG +A E++ M+
Sbjct: 758 SAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELML 798
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 267/500 (53%), Gaps = 4/500 (0%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C + EG +H + + L N +SM+ K G + A VF M D+D+
Sbjct: 107 LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SWN +I GYA G EA L+ +M G+KP+ TF +L C L+ G+++H
Sbjct: 167 VSWNAMISGYALHGRDQEAADLFYQM-QREGLKPNQNTFISILSACQSPIALEFGEQIHS 225
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+ + GYE+DV+V ALI MY KCG L AR VF+ M +R+ +SW AMISGY ++G+ +
Sbjct: 226 RIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSRE 285
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L LF + + P+ ++ +S++ A D G ++H Y+ + G +V V N LI
Sbjct: 286 ALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALIS 345
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ +VF + S + +W MI+ Y G L ++A ++ ME +G PD+ T
Sbjct: 346 MYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPDKFT 404
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
AS+L+ CA +LD G +LH TG + + +A LI MY+KC ++A +VF+Q+P
Sbjct: 405 YASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMP 464
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE 520
++NVISW + I ++ EA F++M ++ P+ +T +++L++C L G+
Sbjct: 465 ERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRY 524
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQ 579
IH + G+ + + NAL+ MY RCG + A F RD+ +WN ++ + G
Sbjct: 525 IHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGA 584
Query: 580 GALAEEFFRKMIDSKGNWRK 599
A + FRK G K
Sbjct: 585 NGSAFDLFRKYRSEGGKGDK 604
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 280/529 (52%), Gaps = 4/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L+G ++A MQ + +++ ++++ C+ + G +HS ++K
Sbjct: 170 NAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAK 229
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + A ++M+ K G L A VF +M +R++ SW +I GY + G EAL+L
Sbjct: 230 AGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALAL 289
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ G++P+ +F +L C DL G ++H ++ + G E +V V NALI+MY
Sbjct: 290 FRKLI-RSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYS 348
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG L AR VFD + +R +WNAMI+GY E G + LF M + PD T +S
Sbjct: 349 RCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYAS 407
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ D G+E+H + G+ D++V LI MY G+ EE KVF++M ++
Sbjct: 408 LLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERN 467
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SW ISC L +A + ++ M + PD IT ++L++C +L+ G +H
Sbjct: 468 VISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHG 527
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ G++S +AN LI MY +C + A EVF++I +++ SW ++I + +
Sbjct: 528 KINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGS 587
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A FRK K + T +++L A A + L G+ IH + G D + L+
Sbjct: 588 AFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIK 647
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG ++ A N F++ E+DV WN +L YA +G A + F++M
Sbjct: 648 MYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQM 696
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 236/441 (53%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +E+A + +M++ D+ +L+ +C + D G LHS ++ T + +
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVA 440
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +SM+ K G A VF +M +R++ SWN I + EA +++M V
Sbjct: 441 TALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMR-RDDV 499
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD TF +L +C DL+RG+ +H + ++G ++ V NALI+MY +CG+L AR
Sbjct: 500 NPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADARE 559
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + +RD SWNAMI+ ++G LF R D T +V+ A + D
Sbjct: 560 VFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLED 619
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR +HG V K GF D+ V LIKMY G+ + E VFS ++ KDVV W M++
Sbjct: 620 LDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAA 679
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y S A++ +Q M+ EG PD T ++ L+ACA L ++ G K+H G+ +
Sbjct: 680 YAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETD 739
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++N+LI+MYS+C C+ A +VF ++ +++ SW ++I G N + AL ++ M+
Sbjct: 740 TRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLR 799
Query: 493 LNLKPNSVTLVSILSACARIG 513
++ PN T SILS+ A++G
Sbjct: 800 ASIVPNKATFTSILSSYAQLG 820
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 206/401 (51%), Gaps = 3/401 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+ ++ + L+ C L GK+VH H+ ++ D+ + N LI+MY KCG + A
Sbjct: 95 GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF M +D +SWNAMISGY +G + LF M+ + P+ T S++SA +
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G ++H + K G+ DV+V LI MY G+ E KVF+ M ++VVSWT MI
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y +A+ ++ + G P++++ AS+L AC +L G+KLH + GL
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE 334
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ N LI MYS+C + A +VF + N +W ++I G EA FR M
Sbjct: 335 QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAM 393
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+P+ T S+L+ CA L GKE+H+ G D + AL+ MY +CG
Sbjct: 394 EQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSP 453
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A FN ER+V +WN ++ G A + F++M
Sbjct: 454 EEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQM 494
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D+ +N++R D G +H +V K +R+ + M+ K G L A VF
Sbjct: 603 DKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVF 662
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ ++D+ WN ++ YA + +AL L+Q+M + GV PD T+ L C + +
Sbjct: 663 STVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQM-QLEGVNPDSSTYSTALNACARLTAV 721
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ GK++H + G E D V N+LI MY +CG L A+ VF+ M RD SWNA+I+GY
Sbjct: 722 EHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGY 781
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+NG+ L + +M + P+ T +S++S+ +G+E+
Sbjct: 782 CQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEE 823
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 289/534 (54%), Gaps = 4/534 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L +G E+A + M+ + ++ ++++ C + G +HS +S+
Sbjct: 354 NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE 413
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V++GN+ +SM+ + GDL A +F M RDL SWN +I GYA+ EA+ L
Sbjct: 414 VGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKL 473
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y++M GVKP TF +L C GK +H ++R G +++ + NAL+ MY
Sbjct: 474 YKQM-QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG ++ A+ VF+G RD ISWN+MI+G+ ++G Y LF+ M++ ++PD +T +S
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFAS 592
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + +LGR++H +I+ G DV++ N LI MY+ G+ ++ +VF + ++
Sbjct: 593 VLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRN 652
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SWT MI + KA E + M+ +G P + T +S+L AC LD G K+
Sbjct: 653 VMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIA 712
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +G + N LI YSK + A +VF ++P+++++SW +I G N
Sbjct: 713 HILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGT 772
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
AL F +M + N + VSIL+AC+ AL GK +HA ++ + D + AL+
Sbjct: 773 ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALIS 832
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
MY +CG ++ A F N E++V WN ++ YA+ G + A +FF M D +G
Sbjct: 833 MYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCM-DKEG 885
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 256/496 (51%), Gaps = 3/496 (0%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
A V+LV+ C KR E +H+ + + + L N ++M+VK + A VF KM
Sbjct: 84 AYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKM 143
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
RD+ SWN LI YA+ GF +A L++ M G P T+ +L C +L+ G
Sbjct: 144 PRRDVISWNSLISCYAQQGFKKKAFQLFEEM-QTAGFIPSKITYISILTACCSPAELEYG 202
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H +I GY+ D V N+L+ MY KC DL AR VF G+ +RD +S+N M+ Y +
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + LF M + PD +T +++ A G+ +H + G + D+ V
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVG 322
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L M++ G+ ++ +DVV + +I+ ++A E Y M ++G +
Sbjct: 323 TALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVV 382
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+ T SVL+AC+ L G +H G S + I N+LI MY++C + +A E+
Sbjct: 383 MNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAREL 442
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F+ +P +++ISW +II G EA+ +++M +KP VT + +LSAC A
Sbjct: 443 FNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAY 502
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGY 574
GK IH LR G+ +G L NAL++MY RCG + A N F + RD+ +WN ++ G+
Sbjct: 503 SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562
Query: 575 AERGQGALAEEFFRKM 590
A+ G A + F +M
Sbjct: 563 AQHGSYEAAYKLFLEM 578
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 272/530 (51%), Gaps = 5/530 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G ++A + + MQ + ++++ C + G +HS + +
Sbjct: 152 NSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIE 211
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
R+ N+ L+M+ K DL A VF + RD+ S+N ++G YA+ + +E + L
Sbjct: 212 AGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGL 271
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G+ PD T+ +L L GK +H + G +D+ V AL TM+V
Sbjct: 272 FGQMS-SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFV 330
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CGD+ A+ + RD + +NA+I+ ++G Y + + MR V + T S
Sbjct: 331 RCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLS 390
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V++A G +H ++ ++G S DV + N LI MY G+ ++F+ M +D
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW +I+ Y +A++ Y+ M++EG P +T +LSAC G +H+
Sbjct: 451 LISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHE 510
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R+G+ S +AN L++MY +C I +A VF +++ISW S+I G + S+E
Sbjct: 511 DILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG-HAQHGSYE 569
Query: 484 AL--IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A +F L+P+ +T S+L C AL G++IH + G+ D L NAL+
Sbjct: 570 AAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALI 629
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+MY+RCG ++ A+ F+S R+V +W ++ G+A++G+ A E F +M
Sbjct: 630 NMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQM 679
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 259/518 (50%), Gaps = 17/518 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K MQ + ++L+ C Y +G +H + ++ + L NA +
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ + G + A VF RD+ SWN +I G+A+ G ++ A L+ M G++PD
Sbjct: 529 NMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEM-KKEGLEPDK 587
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF VL C L+ G+++H+ +I G + DV++ NALI MY++CG L A VF
Sbjct: 588 ITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA--SELVGDEK 315
+ R+ +SW AMI G+ + GE K LF M+ P T SS++ A S DE
Sbjct: 648 LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE- 706
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++V +++ G+ D V N LI Y G+ + KVF +M ++D++SW MI+ Y
Sbjct: 707 -GKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYA 765
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ L A++ M+ +G + ++ + S+L+AC+ L+ G ++H ++ + +
Sbjct: 766 QNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVR 825
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ LI MY+KC +++A EVF +KNV++W ++I + + +AL FF M
Sbjct: 826 VGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEG 885
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHA-----HALRIGVAFDGFLPNALLDMYVRCGR 549
+KP+ T SILSAC G +M G I + H L + G L+ + R GR
Sbjct: 886 IKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYG----CLVGLLGRAGR 941
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+ A N D + W LL G ALAE
Sbjct: 942 FQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEH 979
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 210/417 (50%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +GS E A K M++ + D+ +++ C+ + G +H ++ +
Sbjct: 556 NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L V LGNA ++M+++ G L A+ VF + R++ SW +IGG+A G +A L
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G KP TF +L+ C L GK+V H++ GYE D V NALI+ Y
Sbjct: 676 FWQM-QNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYS 734
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + AR VFD MP RD +SWN MI+GY +NG L M+E V + + S
Sbjct: 735 KSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVS 794
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + G+ VH ++K DV V LI MY G+ EE ++VF K+
Sbjct: 795 ILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKN 854
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VV+W MI+ Y L KA++ + M+ EG PD T S+LSAC G + G ++
Sbjct: 855 VVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFS 914
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L + GL I L+ + + +A + +Q+P + W +++ R++
Sbjct: 915 SLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIH 971
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ N V ++ C R +L K IHA + GV D FL N L++MYV+C + A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 556 QF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F RDV +WN L++ YA++G A + F +M
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM 174
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 306/565 (54%), Gaps = 12/565 (2%)
Query: 34 PKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICV 93
P+ R S + N S+ + P+ +L C +G L +A + LD + E N V
Sbjct: 24 PRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKL--ACFDGVLTEAFQRLD-VSENNSPV 80
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYV 152
+ A ++ LC +R +G LHS + KT + L + M+ K G L A V
Sbjct: 81 E--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKV 138
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M DR F+WN +IG Y G AL+LY M V GV + +FP +L+ C + D
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRD 197
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-DRISWNAMIS 271
++ G E+H +++ GY + +VNAL++MY K DL AR +FDG ++ D + WN+++S
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FS 330
Y +G+ ++ L LF M P+ T+ S ++A + KLG+E+H V+K S
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ VCN LI MY G + E++ +M + DVV+W ++I Y +++ +A+E + M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
A G DE+++ S+++A L NL G++LH ++ G S + + NTLIDMYSKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
F ++ DK++ISWT++I G N+ EAL FR + ++ + + L SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + +++ KEIH H LR G+ D + N L+D+Y +C M A F S +DV +W
Sbjct: 498 SVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
+++ A G + A E FR+M+++
Sbjct: 557 SMISSSALNGNESEAVELFRRMVET 581
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 6/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG AL +M+ + + + L++ C R G LHS++ K
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
H + + NA +SM+ K DL A +F ++ D WN ++ Y+ +G E L
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITM 241
L++ M G P+ YT L C G K GKE+H V++ + +++ V NALI M
Sbjct: 271 LFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG + +A + M D ++WN++I GY +N Y + L F M D +++
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+S+I+AS + + G E+H YVIK G+ ++ V N LI MY + F RM
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SWTT+I+ Y + +A+E ++ + + DE+ + S+L A + L ++ + ++
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R GL+ +I N L+D+Y KC+ + A VF I K+V+SWTS+I LN
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA+ FR+M+ L +SV L+ ILSA A + AL G+EIH + LR G +G + A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 541 LDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY CG ++ A F+ ER + + ++ Y G G A E F KM
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 224/479 (46%), Gaps = 16/479 (3%)
Query: 42 KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
K Q+ ++L N + + T N S + N ++AL++ M DE ++ ++
Sbjct: 335 KMPQAERILRQMNNADVVTWN--SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ G+ LH+ V K ++++GN + M+ K + F +M D+DL
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW +I GYA+ EAL L+ R ++ D +LR + + KE+H
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELF-RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H++R G D + N L+ +Y KC ++ A VF+ + +D +SW +MIS NG +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M E + D + L ++SA+ + GRE+H Y+++ GF + S+ ++
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + + VF R+E K ++ +T+MI+ Y AVE + M E PD I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 402 IASVLSACACLGNLDLG-----IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
++L AC+ G LD G I H+ + Y+ L+DM + C+ +A E
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 457 FHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG 513
+ + W +++ R ++ I ++ +L L+P N LV + + A G
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR-LLELEPKNPGNLVLVSNVFAEQG 804
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 306/565 (54%), Gaps = 12/565 (2%)
Query: 34 PKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICV 93
P+ R S + N S+ + P+ +L C +G L +A + LD + E N V
Sbjct: 24 PRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKL--ACFDGVLTEAFQRLD-VSENNSPV 80
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYV 152
+ A ++ LC +R +G LHS + KT + L + M+ K G L A V
Sbjct: 81 E--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKV 138
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M DR F+WN +IG Y G AL+LY M V GV + +FP +L+ C + D
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRD 197
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-DRISWNAMIS 271
++ G E+H +++ GY + +VNAL++MY K DL AR +FDG ++ D + WN+++S
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FS 330
Y +G+ ++ L LF M P+ T+ S ++A + KLG+E+H V+K S
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ VCN LI MY G + E++ +M + DVV+W ++I Y +++ +A+E + M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
A G DE+++ S+++A L NL G++LH ++ G S + + NTLIDMYSKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
F ++ DK++ISWT++I G N+ EAL FR + ++ + + L SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + +++ KEIH H LR G+ D + N L+D+Y +C M A F S +DV +W
Sbjct: 498 SVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
+++ A G + A E FR+M+++
Sbjct: 557 SMISSSALNGNESEAVELFRRMVET 581
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 6/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG AL +M+ + + + L++ C R G LHS++ K
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
H + + NA +SM+ K DL A +F ++ D WN ++ Y+ +G E L
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITM 241
L++ M G P+ YT L C G K GKE+H V++ + +++ V NALI M
Sbjct: 271 LFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG + +A + M D ++WN++I GY +N Y + L F M D +++
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+S+I+AS + + G E+H YVIK G+ ++ V N LI MY + F RM
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SWTT+I+ Y + +A+E ++ + + DE+ + S+L A + L ++ + ++
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R GL+ +I N L+D+Y KC+ + A VF I K+V+SWTS+I LN
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA+ FR+M+ L +SV L+ ILSA A + AL G+EIH + LR G +G + A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 541 LDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY CG ++ A F+ ER + + ++ Y G G A E F KM
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 218/464 (46%), Gaps = 15/464 (3%)
Query: 42 KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
K Q+ ++L N + + T N S + N ++AL++ M DE ++ ++
Sbjct: 335 KMPQAERILRQMNNADVVTWN--SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ G+ LH+ V K ++++GN + M+ K + F +M D+DL
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW +I GYA+ EAL L+ R ++ D +LR + + KE+H
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELF-RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H++R G D + N L+ +Y KC ++ A VF+ + +D +SW +MIS NG +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M E + D + L ++SA+ + GRE+H Y+++ GF + S+ ++
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + + VF R+E K ++ +T+MI+ Y AVE + M E PD I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 402 IASVLSACACLGNLDLG-----IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
++L AC+ G LD G I H+ + Y+ L+DM + C+ +A E
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 457 FHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+ + W +++ R ++ I ++ +L L+P +
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR-LLELEPKN 789
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/594 (29%), Positives = 313/594 (52%), Gaps = 12/594 (2%)
Query: 20 NPKTRIPETSFYFKPKTRHFSSK--NAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLE 77
+P+ I E F+ T FS Q + ++ +NT + N+ LN L G L
Sbjct: 32 SPRLVILEEFDTFRLYTTSFSGSYSKGQGNEFVDIKNT-----QRANAFLNRLSKAGQLS 86
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ L S+ +I + +L++LC + +G +H+ + + + + N +
Sbjct: 87 EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLI 146
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
SM+ K G+ A +F +M D+D++SWN+L+GGY + ++EA L+++M GVKPD
Sbjct: 147 SMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQ-DGVKPDK 205
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
YTF +L C ++ +G E+ ++ G++ D+ V ALI M++KCG + A VF+
Sbjct: 206 YTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNN 265
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+P+RD I+W +MI+G + ++ + LF +M E V PD + S++ A + G
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ VH + ++G ++ V L+ MY G+ E+ +VF+ ++ ++VVSWT MI+ +
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
++A + M G P+ +T S+L AC+ L G ++H ++ G I+ +
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
L+ MY+KC + A VF +I +NV++W ++I + + A+ F+ ++ +K
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+S T SIL+ C AL GK + + +R G D + NAL+ M+V CG + A N
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
FN ERD+ +WN ++ G+ + G+ A ++F+ M +S K + GL C
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC 619
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 278/535 (51%), Gaps = 5/535 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+A + + M + + D+ V ++ C + D+G L S++ + +G A
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M +K G + A VF + RDL +W +I G A+ F +A +L+Q M GV+PD
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVM-EEEGVQPD 305
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
F +L+ C L++GK VH + G + ++ V AL++MY KCG + A VF+
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFN 365
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ R+ +SW AMI+G+ ++G + + F M E ++P+ +T S++ A K
Sbjct: 366 LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQ 425
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR++H +IK G+ D V L+ MY G+ + VF R+ ++VV+W MI+ Y
Sbjct: 426 GRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQ 485
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D AV T+Q + EG PD T S+L+ C L+LG + L +R G S + I
Sbjct: 486 HEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHI 545
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
N L+ M+ C + A+ +F+ +P+++++SW +II G + + A +F+ M + +
Sbjct: 546 RNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGV 605
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+ +T +L+ACA AL G+ +HA + D + L+ MY +CG + A
Sbjct: 606 KPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHL 665
Query: 556 QF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F N +++V +W ++TGYA+ G+G A E F +M K +W +G C
Sbjct: 666 VFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSAC 720
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 278/539 (51%), Gaps = 10/539 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + L + +QA M+E + D+ A V+L++ C ++G +H+ + +
Sbjct: 275 TSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKE 334
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G A LSM+ K G + A VF + R++ SW +I G+A+ G +EA
Sbjct: 335 VGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLF 394
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G++P+ TF +L C LK+G+++H +I+ GY D V AL++MY
Sbjct: 395 FNKMI-ESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYA 453
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L+ AR VF+ + K++ ++WNAMI+ Y ++ +Y + F + + + PD T +S
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTS 513
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ + +LG+ V +I+ GF D+ + N L+ M+++ G+ +F+ M +D
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW T+I+ + A + ++MM+ G PD+IT +L+ACA L G +LH
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L L +++ LI MY+KC ID A VFH +P KNV SWTS+I G + R E
Sbjct: 634 LITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKE 693
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNA 539
AL F +M +KP+ +T V LSACA G + G H +++ I + +
Sbjct: 694 ALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLH-HFESMKDFNIEPRMEHY--GC 750
Query: 540 LLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
++D++ R G + A N + D W LL LAE+ +K ++ N
Sbjct: 751 MVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPN 809
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 216/435 (49%), Gaps = 1/435 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +E+A + + M E I + ++++ C +G +H + K R+
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A LSM+ K G L A VF ++ +++ +WN +I Y + +D A++ +Q + G
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALL-KEG 503
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD TF +L C L+ GK V +IR G+E+D+ + NAL++M+V CGDL+ A
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAM 563
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ MP+RD +SWN +I+G+ ++GE F MM+E V PD +T + +++A
Sbjct: 564 NLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPE 623
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H + + DV V LI MY G+ ++ VF + K+V SWT+MI+
Sbjct: 624 ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+E + M+ EG PD IT LSACA G + G+ + +
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEP 743
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++D++ + + +A+E +++ K +LG + E +
Sbjct: 744 RMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKK 803
Query: 493 LNLKPNSVTLVSILS 507
L L PN + ILS
Sbjct: 804 LELDPNDDGVYVILS 818
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 275/519 (52%), Gaps = 3/519 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +E+ALK L MQ+ + D +++ + C+ + G +H + V++
Sbjct: 105 GYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVA 164
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L+M+ K G + A VF KM + + SW + IGGYA G + A ++Q+M GV
Sbjct: 165 NCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME-QEGV 223
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T+ VL LK GK VH ++ G+E+D V AL+ MY KCG R
Sbjct: 224 VPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQ 283
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + RD I+WN MI G E G + + ++ M+ V P+ +T +++A
Sbjct: 284 VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAA 343
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+E+H V K GF+ D+ V N LI MY G+ ++ VF +M KDV+SWT MI
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG 403
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
S +A+ YQ M+ G P+ +T S+L+AC+ L+ G ++HQ + GL +
Sbjct: 404 LAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ NTL++MYS C + A +VF ++ ++++++ ++I G +N EAL F ++
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
LKP+ VT +++L+ACA G+L +EIH + G D + NAL+ Y +CG
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSD 583
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F +R+V +WN ++ G A+ G+G A + F +M
Sbjct: 584 ASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERM 622
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 251/461 (54%), Gaps = 5/461 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+++ G + A V+ K+ +R + SWN ++ GY + G+ ++AL L ++M
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQM-QQH 120
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD T L +C L+ G+E+H ++ G DV V N ++ MY KCG + A
Sbjct: 121 GLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEA 180
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD M K+ +SW I GY + G +F M + V P+ +T SV++A
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
K G+ VH ++ G D +V L+KMY G+ ++ +VF ++ ++D+++W TMI
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
++A E Y M+ EG MP++IT +L+AC L G ++H + G
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S I + N LI MYS+C I A VF ++ K+VISWT++I GL + EAL +++M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
++PN VT SIL+AC+ AL G+ IH + G+A D + N L++MY CG +
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSV 480
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
K A F+ +RD+ A+N ++ GYA G A + F ++
Sbjct: 481 KDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRL 521
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 244/447 (54%), Gaps = 2/447 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A + M++ + + ++++ G +HS + +G
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K G VF K+ +RDL +WN +IGG A+ G+++EA +Y +M GV
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQM-QREGV 324
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T+ +L C L GKE+H V + G+ +D+ V NALI+MY +CG + ARL
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M ++D ISW AMI G ++G + L ++ M++ V+P+ +T +S+++A
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ GR +H V++ G + D V N L+ MY G+ ++ +VF RM +D+V++ MI
Sbjct: 445 LEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGG 504
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L +A++ + ++ EG PD++T ++L+ACA G+L+ ++H L + G S
Sbjct: 505 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSD 564
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ N L+ Y+KC A VF ++ +NVISW +II G + R +AL F +M M
Sbjct: 565 TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKM 624
Query: 493 LNLKPNSVTLVSILSACARIGALMCGK 519
+KP+ VT VS+LSAC+ G L G+
Sbjct: 625 EGVKPDIVTFVSLLSACSHAGLLEEGR 651
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 214/403 (53%), Gaps = 4/403 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + + + +L+ C V DL G++VH H+I+ D VNALI MY++CG + A
Sbjct: 18 GAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEA 77
Query: 252 RLVFDGMPKRDRI--SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
R V+ + +R SWNAM+ GY + G K L L M++ + PD T+ S +S+ +
Sbjct: 78 RQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCK 137
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G + GRE+H ++ G DV V N ++ MY G+ EE +VF +ME K VVSWT
Sbjct: 138 SPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTI 197
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
I Y + A E +Q ME EG +P+ IT SVL+A + L G +H + G
Sbjct: 198 TIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAG 257
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S + L+ MY+KC +VF ++ ++++I+W ++I GL EA +
Sbjct: 258 HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN 317
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M + PN +T V +L+AC AL GKEIH+ + G D + NAL+ MY RCG
Sbjct: 318 QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCG 377
Query: 549 RMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
+K A F+ R DV +W ++ G A+ G GA A +++M
Sbjct: 378 SIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 211/417 (50%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G E+A + + MQ + ++ V L+ C G +HS V+K
Sbjct: 297 NTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAK 356
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA +SM+ + G + A VF KM +D+ SW +IGG AK+GF EAL++
Sbjct: 357 AGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTV 416
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
YQ M GV+P+ T+ +L C L+ G+ +H V+ G D V N L+ MY
Sbjct: 417 YQEM-QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYS 475
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG + AR VFD M +RD +++NAMI GY + + L LF ++E + PD +T +
Sbjct: 476 MCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 535
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A G + RE+H V K GF D SV N L+ Y G+ + VF +M ++
Sbjct: 536 MLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN 595
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH- 422
V+SW +I A++ ++ M+ EG PD +T S+LSAC+ G L+ G +
Sbjct: 596 VISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC 655
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
++ +I I ++D+ + +D+A + +P N W +++ R++
Sbjct: 656 SMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIH 712
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 119/214 (55%), Gaps = 4/214 (1%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
D AV+ Q ++ +G+ + +L C + +L G ++HQ ++ + N L
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64
Query: 441 IDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
I+MY +C I++A +V+ ++ ++ V SW ++++G +AL R+M + L P
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T++S LS+C GAL G+EIH A++ G+ FD + N +L+MY +CG ++ A F
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ E + V +W I + GYA+ G+ A E F+KM
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKM 218
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 293/544 (53%), Gaps = 9/544 (1%)
Query: 55 TSSI--ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
TSS+ +TK NS +N L +G +Q L SM + D +L++ C +
Sbjct: 4 TSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLS 63
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
GL +H V + ++ ++++ KFG L HA VF +M +RD+ W +IG Y+
Sbjct: 64 FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS 123
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+AG EA SL M + G+KP T +L GV ++ + + +H + +G++ D+
Sbjct: 124 RAGIVGEACSLVNEMRF-QGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDI 179
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+N+++ +Y KC + A+ +FD M +RD +SWN MISGY G + L L MR
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ PD T + +S S + D ++GR +H ++K GF D+ + LI MYL G E
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+V + +KDVV WT MIS +KA+ + M GS IASV+++CA L
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
G+ DLG +H +R G N+LI MY+KC +DK+L +F ++ +++++SW +II
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 473 LGLRLNNRSFEALIFFRKMMLNL--KPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
G N +AL+ F +M + +S T+VS+L AC+ GAL GK IH +R +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ AL+DMY +CG ++ A F+S + +DV +W IL+ GY G+G +A E + +
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 590 MIDS 593
+ S
Sbjct: 540 FLHS 543
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 249/476 (52%), Gaps = 10/476 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L+++ K +G A +F +M RD+ SWN +I GYA G E L L RM G+
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGL 241
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD TF L G + DL+ G+ +H +++ G++ D+ + ALITMY+KCG +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + +P +D + W MISG G K L++F M + D ++SV+++ +G
Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGS 361
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG VHGYV++ G++ D N LI MY G+ ++ +F RM +D+VSW +IS
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISG 421
Query: 374 YEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +V KA+ ++ M+ + D T+ S+L AC+ G L +G +H + +R+ +
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ L+DMYSKC ++ A F I K+V+SW +I G + + AL + + +
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRM 550
+ ++PN V +++LS+C+ G + G +I + +R GV + ++D+ R R+
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 551 KPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK----GNWRKL 600
+ A+ + N + I+L G+ + + MI+ K G++ KL
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKL 657
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
VD +V+L++ C G +H +V ++ + A + M+ K G L A
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +D+ SW +LI GY G D AL +Y F G++P+ F VL +C
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE-FLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 213 LKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+++G ++ ++R FG E + + + ++ + L RA+ + D
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDL------LCRAKRIEDA 604
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 262/461 (56%), Gaps = 3/461 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG+ + M+VK GD+ A VF M + ++ WN+++GGYAK G F+E+LSL+ +M +
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G + PD + C+L+ + + G H ++++ G+ A V NALI+ Y K +
Sbjct: 412 G-IAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGD 470
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A LVF+ MP++D ISWN++ISG NG + + LFI M + D +TL SV+ A
Sbjct: 471 AVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ 530
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
GR VHGY +K G + S+ N L+ MY + + + ++F M K+VVSWT M
Sbjct: 531 SRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAM 590
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y + L DK Q M +G PD + S L A A +L G +H +R G+
Sbjct: 591 ITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM 650
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +AN L++MY KC+ +++A +F ++ +K+VISW ++I G NN E+ F
Sbjct: 651 EKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSD 710
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M+L +PN+VT+ IL A A I +L G+EIHA+ALR G D + NAL+DMYV+CG +
Sbjct: 711 MLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGAL 770
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ ++++ +W I++ GY G G A F +M
Sbjct: 771 LVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 274/555 (49%), Gaps = 33/555 (5%)
Query: 52 TQNTSSIATKNP---------NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLV 102
T SS +TKNP N R+ LC G L AL+ L S + VD + +V
Sbjct: 49 TAAPSSWSTKNPPSRALSSDVNLRIQRLCQAGDLAGALRLLGS----DGGVDVRSYCMVV 104
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLS----VRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+LC +R + H+++ + + + LG + ++K GDLG A VF M
Sbjct: 105 QLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPP 164
Query: 159 R--DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
+ D+ W L+ YAKAG F EA+SL+++M GV PD + CVL+ + L G
Sbjct: 165 QAADVRVWTSLMSAYAKAGDFQEAVSLFRQM-QCCGVSPDAHAVSCVLKCVSSLGSLTEG 223
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H + + G V NALI +Y +CG + A VFD M RD ISWN+MI G F N
Sbjct: 224 EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSN 283
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF------- 329
G + + LF M + +T+ SV+ A +G +G+ VHGY +K G
Sbjct: 284 GWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSV 343
Query: 330 ---SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVE 385
DD ++ + L+ MY+ G+ +VF M SK +V W ++ Y ++++
Sbjct: 344 QSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLS 403
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M G PDE I+ +L CL G+ H ++ G + + N LI Y+
Sbjct: 404 LFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYA 463
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVS 504
K I A+ VF+++P ++ ISW S+I G N + EA+ +F R + +SVTL+S
Sbjct: 464 KSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLS 523
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+L ACA+ G+ +H ++++ G+ + L NALLDMY C + F S +++
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN 583
Query: 564 VSAWNILLTGYAERG 578
V +W ++T Y G
Sbjct: 584 VVSWTAMITSYMRAG 598
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 237/509 (46%), Gaps = 10/509 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +A++ M +D L++++ C R + G +H K
Sbjct: 487 NSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVK 546
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T L NA L M+ D +F M +++ SW +I Y +AG FD+ L
Sbjct: 547 TGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL 606
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q M + G++PDV+ L G LK+GK VH + IR G E + V NAL+ MYV
Sbjct: 607 LQEMV-LDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYV 665
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC ++ ARL+FD + +D ISWN +I GY N + LF M + P+ +T++
Sbjct: 666 KCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTC 724
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A+ + + GRE+H Y ++ GF +D N L+ MY+ G +F R+ K+
Sbjct: 725 ILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKN 784
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SWT MI+ Y A+ ++ M G PD + +++L AC G G + +
Sbjct: 785 LISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFK 844
Query: 424 LAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+ I + T ++D+ S+ + +ALE +P + + W S++ G R++
Sbjct: 845 AMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNV 904
Query: 482 FEALIFFRKMMLNLKPNS----VTLVSILSACARIGALMCGK-EIHAHALRIGVAFDGFL 536
A K + L+P + V L +I + R A+ K +I LR +
Sbjct: 905 KLAEKVADK-VFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIE 963
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNERDVS 565
+ + +++ R P WN+ DV+
Sbjct: 964 VRSKVHVFIADNRNHPDWNRIAEFLDDVA 992
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK--NVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ L+ Y KC + +A VF +P + +V WTS++ EA+ FR+M
Sbjct: 137 VLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQ 196
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ P++ + +L + +G+L G+ IH ++G+ + NAL+ +Y RCGRM+
Sbjct: 197 CCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRME 256
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+S + RD +WN ++ G G A + F KM
Sbjct: 257 DAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKM 296
>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 279/524 (53%), Gaps = 6/524 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E A++ + M++ + +E N+++ C G +H + +RL
Sbjct: 84 NNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRL 143
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA + M+ + G + A VF M DRD+ +WNV+IG + G EA SL+ +M G
Sbjct: 144 GNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGF 203
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD T+ +L L KEVH H +R G E+DV V AL+ MY + G + AR
Sbjct: 204 V-PDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGSIKDAR 262
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVI-SASEL 310
LVFD M +R+ I+WN+MI G ++G ++ LF M RE LV PD +T +++ +A
Sbjct: 263 LVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLV-PDAITYVNILNNACAS 321
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G + R+VH K+G DV V N L+ MY G+ ++ +VF M +DVVSWT M
Sbjct: 322 TGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVM 381
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I +A + M+ EG +P+ T S+L+ A G L+ ++H A+ L
Sbjct: 382 IGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAEL 441
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S++ + N LI MY+KC I+ A VF ++ D+++ISW ++I GL N EA F +
Sbjct: 442 DSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLE 501
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M P++ TLVSIL+ACA AL KE+H+HAL G+ D + +AL+ Y +CGR
Sbjct: 502 MQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCGR 561
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A F RD+ WN+++ G A+ G+ A F +M D
Sbjct: 562 IDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQD 605
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 264/477 (55%), Gaps = 4/477 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H + K+ + N +S++++ G L + VF + ++++F+W ++IGGYA+
Sbjct: 27 VHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVFDTLVEKNVFNWTIMIGGYAENNH 86
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F++A+ +Y +M GV+P+ TF +L+ C LK G+++H H+ G+++D+ + N
Sbjct: 87 FEDAIEVYNKMRQ-NGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGN 145
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
ALI MY +CG + ARLVF+GM RD I+WN MI ++G + LF+ M+ P
Sbjct: 146 ALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVP 205
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D T S+++A+ G +EVH + ++ G DV V L+ MY G+ ++ VF
Sbjct: 206 DTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGSIKDARLVF 265
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL-SACACLGNL 415
+M +++++W +MI +A ++ M+ EG +PD IT ++L +ACA G L
Sbjct: 266 DKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGAL 325
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
K+H A + GL + + N L+ MY+KC +D A VF+ + D++V+SWT +I GL
Sbjct: 326 QWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVMIGGL 385
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+ EA F +M PN T +SIL+ A GAL KE+H HA+ +
Sbjct: 386 AQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDSHL 445
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+ MY +CG ++ A F+ E RD+ +WN ++ G A+ G G A F +M
Sbjct: 446 RVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLEM 502
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 264/527 (50%), Gaps = 10/527 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL--CEWKRGYDEGLYLHSVV 121
N + L +G +A MQ D ++++ C G+ + ++ H++
Sbjct: 176 NVMIGRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALR 235
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ S VR+G A + M+ + G + A VF KM +R++ +WN +IGG A+ G EA
Sbjct: 236 AGLES--DVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAF 293
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLR-TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
SL+++M G+ PD T+ +L C L+ ++VH + G + DV V NAL+
Sbjct: 294 SLFRQM-QREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVH 352
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG + AR VF GM RD +SW MI G ++G + LF+ M+ P+ T
Sbjct: 353 MYAKCGSMDDARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTT 412
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+++ G + +EVH + + + V N LI MY G+ E VF RME
Sbjct: 413 YLSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRME 472
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D++SW MI + +A + M+ EG +PD T+ S+L+ACA LD +
Sbjct: 473 DRDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKE 532
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A+ GL S + + + L+ Y+KC ID A VF + +++I+W +I GL + R
Sbjct: 533 VHSHALEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHGR 592
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EA F +M + P+++T +SIL I AL KE+H HA+R G D + +A
Sbjct: 593 EHEAFSLFLQMQDVGFVPDAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDPRVSSA 652
Query: 540 LLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALA 583
L+ MY +CG + A F N + D +AW LL G +A
Sbjct: 653 LVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHGDVEMA 699
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 217/401 (54%), Gaps = 3/401 (0%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D YT+ +L+ DL K+VH +I+ E V N L+++Y++CG L R
Sbjct: 1 ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +++ +W MI GY EN + + ++ MR+ V P+ +T +++ A
Sbjct: 61 EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K GR++H ++ GF D+ + N LI MY G+ ++ VF+ M +D+++W MI
Sbjct: 121 ALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIG 180
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+A + M+ EG +PD T S+L+A AC G L ++H A+R GL S
Sbjct: 181 RLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLES 240
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+ MY++ I A VF ++ ++N+I+W S+I GL + EA FR+M
Sbjct: 241 DVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQ 300
Query: 493 LN-LKPNSVTLVSIL-SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L P+++T V+IL +ACA GAL +++H A ++G+ FD + NAL+ MY +CG M
Sbjct: 301 REGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSM 360
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F +RDV +W +++ G A+ G G A F +M
Sbjct: 361 DDARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQM 401
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 260/461 (56%), Gaps = 3/461 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG+ + M+VK GD+G A VF M + ++ WN+++GGYAKA F+E+L L+++M +
Sbjct: 345 LGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHEL 404
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G + PD + C+L+ + + G H ++++ G+ V NALI+ Y K +
Sbjct: 405 G-ITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDN 463
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A LVFD MP +D ISWN++ISG NG + + LF+ M + D TL SV+ A
Sbjct: 464 AVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACAR 523
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+GR VHGY +K G + S+ N L+ MY + + ++F M K+VVSWT M
Sbjct: 524 SHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAM 583
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y + L DK Q M +G PD + SVL A +L G +H A+R G+
Sbjct: 584 ITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGM 643
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +AN L++MY C+ +++A VF + +K++ISW ++I G NN + E+ F
Sbjct: 644 EKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSD 703
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M+L KPN+VT+ IL A A I +L G+EIHA+ALR G D + NAL+DMYV+CG +
Sbjct: 704 MLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGAL 763
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ ++++ +W I++ GY G G A F +M
Sbjct: 764 LVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQM 804
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 272/538 (50%), Gaps = 20/538 (3%)
Query: 56 SSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL 115
S + + + N R+ LC G L AL+ L S + + + +V+LC +R +
Sbjct: 59 SRVLSSDVNLRIQRLCQAGDLAAALRLLGSDGGVGV----RSYCAVVQLCGEERSLEAAR 114
Query: 116 YLHSVV-SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR--DLFSWNVLIGGYA 172
H++V + T + LG + ++K GDLG A VF +M R D+ W L+ YA
Sbjct: 115 RAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYA 174
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
KAG F E +SL+++M GV PD + CVL+ + + G+ +H + + G
Sbjct: 175 KAGDFQEGVSLFRQM-QCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEAC 233
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI +Y +CG + A VFD M RD ISWN+ ISGYF NG + + + LF M
Sbjct: 234 AVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSE 293
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF---------SDDVSVCNPLIKMY 343
+ +T+ SV+ A +G E +G+ VHGY +K G D ++ + L+ MY
Sbjct: 294 GTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMY 353
Query: 344 LSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
+ G+ +VF M SK +V W ++ Y + ++++ ++ M G PDE +
Sbjct: 354 VKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHAL 413
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+ +L CL G+ H ++ G + + N LI Y+K ID A+ VF ++P
Sbjct: 414 SCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH 473
Query: 463 KNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
++ ISW S+I G N + EA+ +F R M + +S TL+S+L ACAR G+ +
Sbjct: 474 QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVV 533
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
H ++++ G+ + L NALLDMY C F N +++V +W ++T Y G
Sbjct: 534 HGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAG 591
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 263/532 (49%), Gaps = 17/532 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ + MQ + D A+ +++ EG +H ++ K + +
Sbjct: 177 GDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVA 236
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++++ + G + A VF M RD SWN I GY G+ D A+ L+ +M W G
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKM-WSEGT 295
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA---------LITMYVK 244
+ T VL C + GK VH + ++ G D++ V + L+ MYVK
Sbjct: 296 EISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVK 355
Query: 245 CGDLVRARLVFDGMPKRDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CGD+ AR VFD MP + + WN ++ GY + E+ + L+LF M E+ + PD LS
Sbjct: 356 CGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSC 415
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + G HGY++K+GF +VCN LI Y + VF RM +D
Sbjct: 416 LLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQD 475
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW ++IS + L +A+E + M +G D T+ SVL ACA +G +H
Sbjct: 476 TISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHG 535
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++TGLI +AN L+DMYS C ++F + KNV+SWT++I +
Sbjct: 536 YSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDK 595
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--NAL 540
++M+L+ +KP+ + S+L A +L GK +H +A+R G+ + LP NAL
Sbjct: 596 VAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGM--EKLLPVANAL 653
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++MYV C M+ A F+ +D+ +WN L+ GY+ + F M+
Sbjct: 654 MEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML 705
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 227/501 (45%), Gaps = 10/501 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +A++ M +D L++++ C + G +H K
Sbjct: 480 NSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVK 539
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T L NA L M+ D +F M +++ SW +I Y +AG FD+ L
Sbjct: 540 TGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL 599
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q M + G+KPDV+ VL G LK+GK VH + IR G E + V NAL+ MYV
Sbjct: 600 LQEMV-LDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYV 658
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
C ++ ARLVFD + +D ISWN +I GY N + LF M + P+ +T++
Sbjct: 659 NCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTC 717
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + + GRE+H Y ++ GF +D N L+ MY+ G +F R+ K+
Sbjct: 718 ILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKN 777
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SWT MI+ Y AV ++ M G PD + +++L AC G G K
Sbjct: 778 LISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFN 837
Query: 424 LAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+ I + T ++D+ S + +A E +P + + W S++ G R+ +R
Sbjct: 838 AMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRI-HRD 896
Query: 482 FEALIFFRKMMLNLKPNS----VTLVSILSACARIGALMCGK-EIHAHALRIGVAFDGFL 536
+ + L+P + V L +I + R A+ K +I LR
Sbjct: 897 VKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIE 956
Query: 537 PNALLDMYVRCGRMKPAWNQF 557
+ +++ R P WN+
Sbjct: 957 VRGKVHVFIADNRNHPEWNRI 977
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 216/447 (48%), Gaps = 32/447 (7%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ I +AG AL L VG V ++ V++ CG L+ + H ++
Sbjct: 67 NLRIQRLCQAGDLAAALRLLGSDGGVG-----VRSYCAVVQLCGEERSLEAARRAHA-LV 120
Query: 225 RFGYEADVDVV--NALITMYVKCGDLVRARLVFDGMPKR--DRISWNAMISGYFENGEYM 280
R G + V L+ Y+KCGDL AR+VFD MP R D W +++S Y + G++
Sbjct: 121 RAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQ 180
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+G+ LF M+ V PD +S V+ +G G +HG + K+G + +V N LI
Sbjct: 181 EGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALI 240
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+Y G E+ +VF M ++D +SW + IS Y + D+AV+ + M +EG+ +
Sbjct: 241 ALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSV 300
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYI---------IIANTLIDMYSKCKCID 451
T+ SVL ACA LG +G +H +M++GL+ + + + L+ MY KC +
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMG 360
Query: 452 KALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILS-- 507
A VF +P K NV W I+ G E+L+ F +M L + P+ L +L
Sbjct: 361 SARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420
Query: 508 ---ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+CAR G + H + +++G + NAL+ Y + + A F+ +D
Sbjct: 421 TCLSCARDGLVA-----HGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQD 475
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKM 590
+WN +++G G + A E F +M
Sbjct: 476 TISWNSVISGCTSNGLNSEAIELFVRM 502
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 259/457 (56%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F K+G + A VF + D+ ++ ++ GYAK + AL+ RM + VKP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVKP 145
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG DLKRGKE+H +I + A+V + ++ MY KC + A +F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD +SWN +I+G+ +NG K L L + M++ PD +TL +V+ A+ VG
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+ +HGY I+ GF+ V++ L MY G+ E +F M+ K VVSW +M+ Y
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P+KA+ ++ M EG P +TI L ACA LG+L+ G +H+ + L S I
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N+LI MYSKCK +D A ++F+ + + +SW ++ILG N R EAL F +M L
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP+S T+VS++ A A + K IH +R + + F+ AL+DMY +CG + A
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMAR 505
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ++R V WN ++ GY G G A + F KM
Sbjct: 506 KLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 251/486 (51%), Gaps = 5/486 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N SLE AL +L M+ ++ L+++C G +H + +V
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
++M+ K + A+ +F +M +RDL SWN +I G+++ GF +AL L RM G
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM-QDEG 243
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD T VL V L GK +H + IR G+ V++ AL MY KCG + AR
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+FDGM ++ +SWN+M+ GY +NGE K + +F M E +DP +T+ + A +G
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ VH +V ++ D+SV N LI MY + +F+ + + VSW MI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A+ + M++ G PD T+ SV+ A A L +H L +R+ L
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + L+DMYSKC I A ++F I D++VI+W ++I G + AL F KM
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
++PN +T +S++SAC+ G + G H +++ + + + A++D+ R GR
Sbjct: 544 KGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602
Query: 550 MKPAWN 555
+K AW+
Sbjct: 603 IKEAWD 608
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 201/402 (50%), Gaps = 7/402 (1%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ VY P +L C + +L ++ VI+ G + L++++ K G +
Sbjct: 43 IPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINE 99
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ + + ++ M+ GY +N L MR V P + ++
Sbjct: 100 AARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGD 159
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D K G+E+HG +I F+ +V ++ MY ++ K+F RM +D+VSW T+
Sbjct: 160 NADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTI 219
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ + + KA+E M+ EG PD IT+ +VL A A +G L +G +H A+R G
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I+ L DMYSKC ++ A +F + K V+SW S++ G N +A+ F K
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+ + P VT++ L ACA +G L GK +H ++ + D + N+L+ MY +C R
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKR 399
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + FN+ N R +WN ++ GYA+ G+ + A F +M
Sbjct: 400 VDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 221/462 (47%), Gaps = 24/462 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++AL+ + MQ+ D LV ++ D GL + V K
Sbjct: 217 NTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVL-----PAAADVGLLM---VGK 268
Query: 124 TMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
++ ++R G A M+ K G + A +F M + + SWN ++ GY + G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
++A++++++M G+ P T L C + DL+RGK VH V + +D+ V+
Sbjct: 329 EPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+LI+MY KC + A +F+ + R +SWNAMI GY +NG + L F M+ + +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+ SVI A + + + +HG +I+ ++ V L+ MY G K+
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + + V++W MI Y L A++ + M+ P++IT SV+SAC+ G +
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLV 567
Query: 416 DLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
D G++ H +M+ GL + ++D+ + I +A + +P I+ +L
Sbjct: 568 DEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
G +++ E K + L P+ V L +I ++ ++
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 668
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 141/271 (52%), Gaps = 2/271 (0%)
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
VIK G ++ L+ ++ +G+ E +VF ++ K + TM+ Y + + A
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M + P +L C +L G ++H + + + +++M
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTL 502
Y+KC+ ID A ++F ++P+++++SW +II G N + +AL + R +P+S+TL
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V++L A A +G LM GK IH +A+R G A + AL DMY +CG ++ A F+ ++
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ 311
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ V +WN ++ GY + G+ A F KM++
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE 342
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 259/457 (56%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F K+G + A VF + D+ ++ ++ GYAK + AL+ RM + VKP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVKP 145
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG DLKRGKE+H +I + A+V + ++ MY KC + A +F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD +SWN +I+G+ +NG K L L + M++ PD +TL +V+ A+ VG
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+ +HGY I+ GF+ V++ L MY G+ E +F M+ K VVSW +M+ Y
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P+KA+ ++ M EG P +TI L ACA LG+L+ G +H+ + L S I
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N+LI MYSKCK +D A ++F+ + + +SW ++ILG N R EAL F +M L
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP+S T+VS++ A A + K IH +R + + F+ AL+DMY +CG + A
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMAR 505
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ++R V WN ++ GY G G A + F KM
Sbjct: 506 KLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 251/486 (51%), Gaps = 5/486 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N SLE AL +L M+ ++ L+++C G +H + +V
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
++M+ K + A+ +F +M +RDL SWN +I G+++ GF +AL L RM G
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRM-QDEG 243
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD T VL V L GK +H + IR G+ V++ AL MY KCG + AR
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+FDGM ++ +SWN+M+ GY +NGE K + +F M E +DP +T+ + A +G
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ VH +V ++ D+SV N LI MY + +F+ + + VSW MI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A+ + M++ G PD T+ SV+ A A L +H L +R+ L
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + L+DMYSKC I A ++F I D++VI+W ++I G + AL F KM
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
++PN +T +S++SAC+ G + G H +++ + + + A++D+ R GR
Sbjct: 544 KGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602
Query: 550 MKPAWN 555
+K AW+
Sbjct: 603 IKEAWD 608
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 201/402 (50%), Gaps = 7/402 (1%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ VY P +L C + +L ++ VI+ G + L++++ K G +
Sbjct: 43 IPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINE 99
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ + + ++ M+ GY +N L MR V P + ++
Sbjct: 100 AARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGD 159
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D K G+E+HG +I F+ +V ++ MY ++ K+F RM +D+VSW T+
Sbjct: 160 NADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTI 219
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ + + KA+E M+ EG PD IT+ +VL A A +G L +G +H A+R G
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I+ L DMYSKC ++ A +F + K V+SW S++ G N +A+ F K
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+ + P VT++ L ACA +G L GK +H ++ + D + N+L+ MY +C R
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKR 399
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + FN+ N R +WN ++ GYA+ G+ + A F +M
Sbjct: 400 VDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 199/408 (48%), Gaps = 20/408 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++AL+ + MQ+ D LV ++ D GL + V K
Sbjct: 217 NTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVL-----PAAADVGLLM---VGK 268
Query: 124 TMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
++ ++R G A M+ K G + A +F M + + SWN ++ GY + G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
++A++++++M G+ P T L C + DL+RGK VH V + +D+ V+
Sbjct: 329 EPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+LI+MY KC + A +F+ + R +SWNAMI GY +NG + L F M+ + +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+ SVI A + + + +HG +I+ ++ V L+ MY G K+
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKL 507
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + + V++W MI Y L A++ + M+ P++IT SV+SAC+ G +
Sbjct: 508 FDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLV 567
Query: 416 DLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
D G++ H +M+ GL + ++D+ + I +A + +P
Sbjct: 568 DEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 141/271 (52%), Gaps = 2/271 (0%)
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
VIK G ++ L+ ++ +G+ E +VF ++ K + TM+ Y + + A
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M + P +L C +L G ++H + + + +++M
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTL 502
Y+KC+ ID A ++F ++P+++++SW +II G N + +AL + R +P+S+TL
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V++L A A +G LM GK IH +A+R G A + AL DMY +CG ++ A F+ ++
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ 311
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ V +WN ++ GY + G+ A F KM++
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE 342
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 297/552 (53%), Gaps = 5/552 (0%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
T+ N+ LN L G +A++ L+ + +I + L++LC + +G +++
Sbjct: 75 TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYN 134
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ K+ + + N ++M+ K G+ A +F M ++D++SWN+L+GGY + G ++E
Sbjct: 135 HIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEE 194
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A L+++M VKPD TF +L C ++ +G+E++ +++ G++ D+ V ALI
Sbjct: 195 AFKLHEQMVQ-DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
M++KCGD+ A VFD +P RD ++W +MI+G +G + + LF M E V PD +
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
S++ A + G++VH + ++G+ ++ V ++ MY G+ E+ +VF +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ ++VVSWT MI+ + D+A + M G P+ +T S+L AC+ L G
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++ + G S + L+ MY+KC + A VF +I +NV++W ++I +
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ AL F+ ++ +KPNS T SIL+ C +L GK +H ++ G+ D + N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KG 595
AL+ M+V CG + A N FN +RD+ +WN ++ G+ + G+ +A ++F+ M +S K
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 596 NWRKLMGLFRKC 607
+ GL C
Sbjct: 614 DKITFTGLLNAC 625
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 249/456 (54%), Gaps = 2/456 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + L +G +QA M+E + D+ A V+L+R C ++G +H+ + +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G A LSM+ K G + A VF + R++ SW +I G+A+ G DEA
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G++P+ TF +L C LKRG+++ H+I GY +D V AL++MY
Sbjct: 401 FNKMI-ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A VF+ + K++ ++WNAMI+ Y ++ +Y L F + + + P+ T +S
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ + +LG+ VH ++K G D+ V N L+ M+++ G+ + +F+ M +D
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW T+I+ + A + ++MM+ G PD+IT +L+ACA L G +LH
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L +++ LI MY+KC I+ A +VFH++P KNV SWTS+I G + R E
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKE 699
Query: 484 AL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
AL +F++ +KP+ +T V LSACA G + G
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 235/425 (55%), Gaps = 7/425 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY--TFPCVLRTCGGVPDLKRG 216
+D N ++ +KAG F+EA+ + +R V +Y T+ +L+ C +L G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLER---VDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ ++ H+ + G + D+ + N LI MY KCG+ + A+ +FD M ++D SWN ++ GY ++
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G Y + L M + V PD T S+++A + GRE++ ++K G+ D+ V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI M++ G+ + KVF + ++D+V+WT+MI+ +A +Q ME EG
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD++ S+L AC L+ G K+H G + I + ++ MY+KC ++ ALEV
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F + +NV+SWT++I G + R EA +FF KM+ + ++PN VT +SIL AC+ AL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G++I H + G D + ALL MY +CG +K A F ++++V AWN ++T Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
Query: 575 AERGQ 579
+ Q
Sbjct: 490 VQHEQ 494
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 297/552 (53%), Gaps = 5/552 (0%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
T+ N+ LN L G +A++ L+ + +I + L++LC + +G +++
Sbjct: 75 TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYN 134
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ K+ + + N ++M+ K G+ A +F M ++D++SWN+L+GGY + G ++E
Sbjct: 135 HIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEE 194
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A L+++M VKPD TF +L C ++ +G+E++ +++ G++ D+ V ALI
Sbjct: 195 AFKLHEQMV-QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
M++KCGD+ A VFD +P RD ++W +MI+G +G + + LF M E V PD +
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
S++ A + G++VH + ++G+ ++ V ++ MY G+ E+ +VF +
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ ++VVSWT MI+ + D+A + M G P+ +T S+L AC+ L G
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQ 433
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++ + G S + L+ MY+KC + A VF +I +NV++W ++I +
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ AL F+ ++ +KPNS T SIL+ C +L GK +H ++ G+ D + N
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KG 595
AL+ M+V CG + A N FN +RD+ +WN ++ G+ + G+ +A ++F+ M +S K
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 596 NWRKLMGLFRKC 607
+ GL C
Sbjct: 614 DKITFTGLLNAC 625
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 249/456 (54%), Gaps = 2/456 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + L +G +QA M+E + D+ A V+L+R C ++G +H+ + +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G A LSM+ K G + A VF + R++ SW +I G+A+ G DEA
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G++P+ TF +L C LKRG+++ H+I GY +D V AL++MY
Sbjct: 401 FNKMI-ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA 459
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A VF+ + K++ ++WNAMI+ Y ++ +Y L F + + + P+ T +S
Sbjct: 460 KCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ + +LG+ VH ++K G D+ V N L+ M+++ G+ + +F+ M +D
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRD 579
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW T+I+ + A + ++MM+ G PD+IT +L+ACA L G +LH
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHA 639
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L +++ LI MY+KC I+ A +VFH++P KNV SWTS+I G + R E
Sbjct: 640 LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKE 699
Query: 484 AL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
AL +F++ +KP+ +T V LSACA G + G
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 235/425 (55%), Gaps = 7/425 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY--TFPCVLRTCGGVPDLKRG 216
+D N ++ +KAG F+EA+ + +R V +Y T+ +L+ C +L G
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLER---VDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ ++ H+ + G + D+ + N LI MY KCG+ + A+ +FD M ++D SWN ++ GY ++
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G Y + L M + V PD T S+++A + GRE++ ++K G+ D+ V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI M++ G+ + KVF + ++D+V+WT+MI+ +A +Q ME EG
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD++ S+L AC L+ G K+H G + I + ++ MY+KC ++ ALEV
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F + +NV+SWT++I G + R EA +FF KM+ + ++PN VT +SIL AC+ AL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G++I H + G D + ALL MY +CG +K A F ++++V AWN ++T Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
Query: 575 AERGQ 579
+ Q
Sbjct: 490 VQHEQ 494
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 287/536 (53%), Gaps = 7/536 (1%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+TK NS +N L +G +Q L SM + D +L++ C + GL +H
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIH 69
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
V + ++ ++++ KFG LGHA VF +M DRD+ W +IG Y++AG F
Sbjct: 70 QKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFG 129
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EA SL + M + G+KP TF L G+ ++ + + +H + +G+E D+ V+N++
Sbjct: 130 EACSLVKEMRF-QGIKPSPVTF---LEMLSGISEITQLQCLHAFALVYGFECDIAVMNSM 185
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ +Y KC + A+ +FD M +RD +SWN MISG+ + L L MR+ + PD
Sbjct: 186 LNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQ 245
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T + +S S + D ++GR +H ++ GF D+ + LI MYL G E +V
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLET 305
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ KDVV WT MIS +KA+ + M GS IASV+++CA LG+ DLG
Sbjct: 306 IPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +R G N+ I MY+KC +DK+L +F ++ +++++SW +II G +
Sbjct: 366 ASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQH 425
Query: 479 NRSFEALIFFRKMMLNL--KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+AL+ F +M + +S+T+VS+L AC+ GAL G+ IH +R + +
Sbjct: 426 GDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLV 485
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
AL+DMY +CG ++ A FNS +DV +W L+ GY G+G +A E + + +
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFL 541
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 242/466 (51%), Gaps = 6/466 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L+++ K +G A +F +M RD+ SWN +I G+A E L L RM G+
Sbjct: 183 NSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRM-RDDGL 241
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD TF L G + DL+ G+ +H ++ G++ D+ + ALITMY+KCG+ +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYR 301
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + +P +D + W MISG G K L++F M D ++SV+++ +G
Sbjct: 302 VLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGS 361
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG VHGYV++ G++ D N I MY G+ ++ +F RM +D+VSW +IS
Sbjct: 362 FDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISG 421
Query: 374 YEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ KA+ ++ M+ + D +T+ S+L AC+ G L +G +H + +R+ +
Sbjct: 422 HAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRP 481
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKM 491
++ L+DMYSKC ++ A F+ I K+V+SW ++I G + + AL I+ +
Sbjct: 482 CTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFL 541
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRM 550
+KPN V +++LS+C+ G + G +I + +R GV + ++D+ R R+
Sbjct: 542 HFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRV 601
Query: 551 KPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ A+ + N + I+L G+ + + R MI+ K
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELK 647
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 208/436 (47%), Gaps = 3/436 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ ++ + LK L M++ + D+ + + + G LH +
Sbjct: 214 NTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVG 273
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + L A ++M++K G+ ++ V + D+D+ W V+I G + G ++AL +
Sbjct: 274 TGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G V+ +C + G VH +V+R GY D +N+ ITMY
Sbjct: 334 FSEMLHSGS-DLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYA 392
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLS 302
KCG L ++ ++F+ M +RD +SWNA+ISG+ ++G+ K L+LF M+ + + D +T+
Sbjct: 393 KCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVV 452
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S++ A G +GR +H VI+ V L+ MY G E ++ F+ + K
Sbjct: 453 SLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWK 512
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVVSW T+I+ Y D A+E Y G P+ + +VLS+C+ G + G+K+
Sbjct: 513 DVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIF 572
Query: 423 QLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
+R G+ ++D+ + K ++ A + + + + I IIL N
Sbjct: 573 SSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHANGK 632
Query: 482 FEALIFFRKMMLNLKP 497
E + M+ LKP
Sbjct: 633 TEVEDIICRDMIELKP 648
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 267/500 (53%), Gaps = 3/500 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
VD V L++ C + G +H + + +V + N L ++ G + A +
Sbjct: 26 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL 85
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F K ++ + SWNV+I GYA G EA +L+ M ++PD +TF +L C
Sbjct: 86 FDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLM-QQERLEPDKFTFVSILSACSSPAV 144
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L G+E+HV V+ G D V NALI+MY KCG + AR VFD M RD +SW +
Sbjct: 145 LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 204
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y E+G + L + M + V P +T +V+SA + + G+++H ++++ + D
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V L KMY+ G ++ +VF + +DV++W TMI + S ++A T+ M
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD T +VLSACA G L G ++H A + GL+S + N LI+MYSK +
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +VF ++P ++V+SWT+++ ++ E+ F++M+ +K N +T + +L AC+
Sbjct: 385 ARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSN 444
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
AL GKEIHA ++ G+ D + NAL+ MY +CG ++ A F + RDV WN L
Sbjct: 445 PVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTL 504
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ G + G+G A + + M
Sbjct: 505 IGGLGQNGRGLEALQRYEVM 524
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 232/437 (53%), Gaps = 2/437 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++A MQ+ + D+ V+++ C + G +H V + +G
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K G + A VF M RD SW L G YA++G+ +E+L Y M V
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQ-ERV 226
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P T+ VL CG + L++GK++H H++ Y +DV V AL MY+KCG AR
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + RD I+WN MI G+ ++G+ + F M E V PD T ++V+SA G
Sbjct: 287 VFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGG 346
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+E+H K G DV N LI MY G+ ++ +VF RM +DVVSWTT++
Sbjct: 347 LARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGR 406
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y ++ T++ M +G ++IT VL AC+ L G ++H ++ GL++
Sbjct: 407 YADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + N L+ MY KC ++ A+ VF + ++V++W ++I GL N R EAL + M
Sbjct: 467 LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKS 526
Query: 494 N-LKPNSVTLVSILSAC 509
++PN+ T V++LSAC
Sbjct: 527 EGMRPNAATFVNVLSAC 543
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 226/420 (53%), Gaps = 4/420 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + D Y + +L++C DL GK+VH H++R G + +V + N L+ +Y CG + A
Sbjct: 23 GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD + +SWN MISGY G + LF +M++ ++PD T S++SA
Sbjct: 83 RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GRE+H V++ G ++D +V N LI MY G+ + +VF M S+D VSWTT+
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y S +++++TY M E P IT +VLSAC L L+ G ++H + +
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ L MY KC A EVF + ++VI+W ++I G + + EA F +M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + P+ T ++LSACAR G L GKEIHA A + G+ D NAL++MY + G M
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSM 382
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
K A F+ +RDV +W LL YA+ Q + F++M+ K N M + + C
Sbjct: 383 KDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC 442
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 219/440 (49%), Gaps = 8/440 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E++LK +M + + +N++ C ++G +H+ + ++ H VR+
Sbjct: 208 SGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRV 267
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A M++K G A VF + RD+ +WN +I G+ +G +EA + RM G
Sbjct: 268 STALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRML-EEG 326
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD T+ VL C L RGKE+H + G +DV NALI MY K G + AR
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MPKRD +SW ++ Y + + ++ F M + V + +T V+ A
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G+E+H V+K G D++V N L+ MY G+ E+ +VF M +DVV+W T+I
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT---G 429
+ +A++ Y++M++EG P+ T +VLSAC ++ G + Q A + G
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR--QFAFMSKDYG 564
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFF 488
++ ++D+ ++ + +A +V IP K + W +++ R++ + E
Sbjct: 565 IVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHC-NVEIGERA 623
Query: 489 RKMMLNLKPNSVTLVSILSA 508
+ L L+P + L LSA
Sbjct: 624 AEHCLKLEPQNAGLYVSLSA 643
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 1/263 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + +G LE+A M E + D ++ C G G +H+ +K
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
VR GNA ++M+ K G + A VF +M RD+ SW L+G YA E+ +
Sbjct: 360 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTT 419
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M GVK + T+ CVL+ C LK GKE+H V++ G AD+ V NAL++MY
Sbjct: 420 FKQMLQ-QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYF 478
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF+GM RD ++WN +I G +NG ++ L + +M+ + P+ T +
Sbjct: 479 KCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVN 538
Query: 304 VISASELVGDEKLGREVHGYVIK 326
V+SA + + GR ++ K
Sbjct: 539 VLSACRVCNLVEEGRRQFAFMSK 561
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
Q + +G D +L +C +L +G ++H+ +R G+ + I NTL+ +Y+ C
Sbjct: 17 QYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC 76
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
+++A ++F + +K+V+SW +I G + EA F M L+P+ T VSIL
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSIL 136
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
SAC+ L G+EIH + G+A D + NAL+ MY +CG ++ A F++ RD
Sbjct: 137 SACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEV 196
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDSK 594
+W L YAE G G + + + M+ +
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQER 225
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 294/541 (54%), Gaps = 24/541 (4%)
Query: 74 GSLEQALKYLDSMQELNICVD------------------EDALVNLVRLCEWKRGYDEGL 115
G+ A+K D + + + VD E+ +V R+ GY EG
Sbjct: 102 GTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM--QSSGYKEGK 159
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKA 174
+HS + + M + L A + + K G A Y+F K+ DR ++ +WNV+IGG+ +
Sbjct: 160 QIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGEN 219
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G ++ +L Y + VK +F C L CG + GK+VH I+ G+E D V
Sbjct: 220 GLWENSLEYY-LLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+L+TMY KC + A VF+ +P ++ WNA+IS Y NG L ++ M+ V
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTV 338
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D T+ +V+++S + G LGR +H ++K +++ + L+ MY FG+
Sbjct: 339 LSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANS 398
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+FS M+ +DVV+W ++IS + + +A++ ++ MEA+ PD +AS++SAC L
Sbjct: 399 IFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEK 458
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+DLG +H +++GL + +A++L+DMYSK ++A +F +P KN+++W SII
Sbjct: 459 VDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISC 518
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
NN ++ F +++ N L P+SV+ S+L+A + + AL+ GK +H + +R+ + FD
Sbjct: 519 YCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFD 578
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ N L+DMY++CG +K A + F +E+++ AWN ++ GY G+ + A E F +M
Sbjct: 579 LQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRS 638
Query: 593 S 593
S
Sbjct: 639 S 639
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 276/547 (50%), Gaps = 15/547 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E +L+Y + N+ V + + C G +H K +
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L+M+ K + A VF ++ D+++ WN LI Y G+ +AL +Y++M +
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM-KLCT 337
Query: 193 VKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V D +T VL + G+ DL G+ +H +++ ++ + + +AL+TMY K GD
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDL--GRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNY 395
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F M +RD ++W ++ISG+ +N +Y + L F M LV PD ++S+ISA
Sbjct: 396 ANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTG 455
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ LG +HG+VIK G DV V + L+ MY FG E +FS M K++V+W ++
Sbjct: 456 LEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSI 515
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
ISCY + LPD ++ + + PD ++ SVL+A + + L G +H +R +
Sbjct: 516 ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + NTLIDMY KC + A +F +I +KN+++W S+I G + +A+ F +
Sbjct: 576 PFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE 635
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCG 548
M + +KP+ VT +S+LS+C G + G + ++ G+ ++D+Y R G
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695
Query: 549 RMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID---SKG-NWRKLM 601
+ A++ F N E D S W LL L E K+++ SKG N+ +L+
Sbjct: 696 CLGDAYS-FVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLL 754
Query: 602 GLFRKCQ 608
L+ + +
Sbjct: 755 NLYGEAE 761
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 241/503 (47%), Gaps = 35/503 (6%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+L++ C G +HS + T H + ++ ++++VK G A VF ++
Sbjct: 58 SLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKS 117
Query: 160 -----DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
D+ WN +I GY + G +E + + RM G K
Sbjct: 118 GVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG---------------------YK 156
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI-SWNAMISGY 273
GK++H +++R D + ALI Y KCG AR +F + R I +WN MI G+
Sbjct: 157 EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGF 216
Query: 274 FENGEYMKGLMLFIMMRE---VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
ENG + L +++ + +V F S E V G++VH IK+GF
Sbjct: 217 GENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVS---FGKQVHCDAIKVGFE 273
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
DD V L+ MY E EKVF+ + K++ W +IS Y G+ A+ Y+ M
Sbjct: 274 DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM 333
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ + D TI +VL++ + G DLG +H ++ L S I I + L+ MYSK
Sbjct: 334 KLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDS 393
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSAC 509
+ A +F + +++V++W S+I G N + EAL FFR M +L KP+S + SI+SAC
Sbjct: 394 NYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC 453
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWN 568
+ + G IH ++ G+ D F+ ++LLDMY + G + A N F+ +++ AWN
Sbjct: 454 TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWN 513
Query: 569 ILLTGYAERGQGALAEEFFRKMI 591
+++ Y L+ F +++
Sbjct: 514 SIISCYCRNNLPDLSINLFSQVL 536
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 224/439 (51%), Gaps = 8/439 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG AL+ M+ + D ++N++ YD G +H+ + K
Sbjct: 311 NALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVK 370
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
S+ + +A L+M+ KFGD +A +F M +RD+ +W +I G+ + + EAL
Sbjct: 371 RPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDF 430
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M VKPD ++ C G+ + G +H VI+ G + DV V ++L+ MY
Sbjct: 431 FRAM-EADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYS 489
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G RA +F MP ++ ++WN++IS Y N + LF + + PD ++ +S
Sbjct: 490 KFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTS 549
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V++A V G+ VHGY++++ D+ V N LI MY+ G + + +F R+ K+
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKN 609
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+W +MI Y KA+E + M + G PD++T S+LS+C G ++ G+ L +
Sbjct: 610 LVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFE 669
Query: 424 -LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLRLNN 479
+ M+ G+ + ++D+Y + C+ A + PD+++ W S++ ++ +
Sbjct: 670 MMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSI--WLSLLCSCKI-H 726
Query: 480 RSFEALIFFRKMMLNLKPN 498
+ E +LN++P+
Sbjct: 727 LNLELGEMVANKLLNMEPS 745
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 210/420 (50%), Gaps = 32/420 (7%)
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EAL LY + V +T+P +L+ C + +L+ GK +H +I G +D + ++L
Sbjct: 39 EALKLYTK----SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSL 94
Query: 239 ITMYVKCGDLVRARLVFDGMPKR-----DRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
I +YVKCG A VFD +PK D WN++I GYF G+ +G++ F M+
Sbjct: 95 INIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQS-- 152
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
K G+++H Y+++ + D + LI Y G E
Sbjct: 153 ------------------SGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEAR 194
Query: 354 KVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+F +++ + ++V+W MI + + L + ++E Y + + E + LSAC
Sbjct: 195 YLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQG 254
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G ++H A++ G + +L+ MY KC+ I+ A +VF+++PDK + W ++I
Sbjct: 255 EFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALI 314
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
N +++AL +++M L + +S T++++L++ + G G+ IH ++ +
Sbjct: 315 SAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQ 374
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +ALL MY + G A + F++ ERDV AW +++G+ + + A +FFR M
Sbjct: 375 SSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAM 434
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+E ++ T S+L ACA L NL G +H + TGL S I ++LI++
Sbjct: 38 IEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINI 97
Query: 444 YSKCKCIDKALEVFHQIPDK-----NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
Y KC A++VF Q+P +V W SII G + E ++ F +M
Sbjct: 98 YVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM------- 150
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+ GK+IH++ +R + FD FL AL+D Y +CGR A F
Sbjct: 151 ------------QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFK 198
Query: 559 --SNERDVSAWNILLTGYAERGQGALAEEFF 587
+ ++ AWN+++ G+ E G + E++
Sbjct: 199 KLKDRSNIVAWNVMIGGFGENGLWENSLEYY 229
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 283/537 (52%), Gaps = 6/537 (1%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
ATK+ N+ +N L G+ L SM + D +LV+ C + GL H
Sbjct: 12 ATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFH 71
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
V + + ++ + KFG A VF M DR++ W +IG Y +AG D
Sbjct: 72 QRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHD 131
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A S+Y M G++P T +L GV +L + +H VI++G+ +DV + N++
Sbjct: 132 VAFSMYNIM-RRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSM 187
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ +Y KCG + A+ +F+ M RD ISWN+++SGY + G + L L I M+ ++PD
Sbjct: 188 LNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQ 247
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T S++SA+ + +G+ VHG++++ G D + LI MYL GN ++F
Sbjct: 248 QTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEG 307
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KDV+SWT MIS + D AV ++ M MP TIASVL+ACA LG+ LG
Sbjct: 308 MMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG 367
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +R + I N+L+ MY+KC ++++ VF ++ ++++SW +I+ G N
Sbjct: 368 TSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQN 427
Query: 479 NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+AL+ F +M +P+S+T+VS+L ACA IGAL GK IH + + +
Sbjct: 428 GHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID 487
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
AL+DMY +CG + A F+ ++D+ +W+ ++ GY G+G A + + +
Sbjct: 488 TALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT 544
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 252/494 (51%), Gaps = 13/494 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ V + V L N+ L+++ K G + A +F M RD+ SWN L+ GYA+ G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
E L L RM G++PD TF ++ L GK VH H++R G E D +
Sbjct: 228 IREVLQLLIRM-KTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET 286
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI MY+KCG++ A +F+GM +D ISW AMISG +N + +F M + V P
Sbjct: 287 SLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMP 346
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T++SV++A +G LG VHGY+++ D+ N L+ MY G+ E+ VF
Sbjct: 347 STATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVF 406
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM +D+VSW ++S + + KA+ + M PD IT+ S+L ACA +G L
Sbjct: 407 DRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALH 466
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H ++ L I+I L+DMYSKC + A + F ++P ++++SW+SII G
Sbjct: 467 QGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYG 526
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDG 534
+ + AL + + ++PN V +SILSAC+ G + G H+ G+
Sbjct: 527 SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRL 586
Query: 535 FLPNALLDMYVRCGRMKPAWN----QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++D+ R GR++ A++ F DV ILL G L + R++
Sbjct: 587 EHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDV--LGILLDACRTTGNVELGDIVAREI 644
Query: 591 IDSK----GNWRKL 600
+ K GN+ +L
Sbjct: 645 VILKPANAGNYVQL 658
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 206/425 (48%), Gaps = 2/425 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G++ + L+ L M+ I D+ +LV + G +H + + +
Sbjct: 226 GNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIE 285
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + M++K G++ A+ +F M +D+ SW +I G + D A+++++RM V
Sbjct: 286 TSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML-KSRV 344
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P T VL C + G VH +++R + D+ N+L+TMY KCG L ++
Sbjct: 345 MPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M +RD +SWNA++SG+ +NG K L+LF MR+ PD +T+ S++ A +G
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA 464
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H +V K + + L+ MY G+ +K F RM +D+VSW+++I+
Sbjct: 465 LHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAG 524
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLIS 432
Y + A+ Y G P+ + S+LSAC+ G +D G+ H + G+
Sbjct: 525 YGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEP 584
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++D+ S+ +++A + ++ K + I+L + E + +
Sbjct: 585 RLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREI 644
Query: 493 LNLKP 497
+ LKP
Sbjct: 645 VILKP 649
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 165/332 (49%), Gaps = 5/332 (1%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
S+NA+I+ G + L+ + M PD T S++ A + G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
I G+S D + LI Y FG+ + KVF M+ ++VV WTTMI CY + D A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
Y +M +G P +T+ +LS L +L LH ++ G S + +AN+++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVY 191
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLV 503
KC ++ A +F + ++VISW S++ G E L +M + ++P+ T
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ER 562
S++SA A L GK +H H LR G+ D + +L+ MY++CG + A+ F +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
DV +W +++G + +A FR+M+ S+
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSR 343
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 261/472 (55%), Gaps = 4/472 (0%)
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
S S L ++ + + FG HA +F ++ + LFSWN +I Y +G +AL L+
Sbjct: 52 SPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFV 111
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+M G PD YT+P V++ CG + G +H + G+++D V N+L+ MY+ C
Sbjct: 112 QMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNC 171
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G++ AR VFD M +R +SWN MI+GYF+NG + LM+F M ++PD T+ SV+
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ + ++GR VH V +D+SV N L+ MY GN +E + +F M+ +DVV
Sbjct: 232 PVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVV 291
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTM++ Y + A+ QMM+ E P+ +T+ASVLSACA L +L G LH A
Sbjct: 292 SWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA 351
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+R L S +I+ LIDMY+KC ++ + VF + + W +II G N S +A+
Sbjct: 352 IRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAI 411
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F++M++ + PN TL S+L A A + L + +H + +R G + L+D+Y
Sbjct: 412 ELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIY 471
Query: 545 VRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+CG ++ A N FN ++D+ W+ ++ GY G G A F +M+ S
Sbjct: 472 SKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 237/428 (55%), Gaps = 11/428 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
N+ ++M++ G++ A VF M +R L SWN +I GY K G EAL ++ M +G G
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM--IGKG 219
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD T VL C + +L+ G+ VH V D+ V N+L+ MY KCG++ A+
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQ 279
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F M KRD +SW M++GY NG+ L+L MM+ V P+F+TL+SV+SA +
Sbjct: 280 MIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLY 339
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K GR +HG+ I+ +V V LI MY N +VFS+ + W +IS
Sbjct: 340 SLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIIS 399
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ L KA+E ++ M E P++ T+ S+L A A L +L +H +R+G +S
Sbjct: 400 GCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLS 459
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRK 490
I +A LID+YSKC ++ A +F+ IP DK++I+W++II G ++ A+ F +
Sbjct: 460 RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQ 519
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL---RIGVAFDGFLPNALLDMYVR 546
M+ + +KPN +T SIL AC+ G + G + L ++ + D + ++D+ R
Sbjct: 520 MVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHY--TCVIDLLGR 577
Query: 547 CGRMKPAW 554
GR++ A+
Sbjct: 578 AGRLEEAY 585
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 206/398 (51%), Gaps = 6/398 (1%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV---DVVNALITMYVKCGDLVRARLVFD 256
+ +L+ C + K++H H I G + ++++L Y G AR +FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEK 315
+ SWNAMI Y +G L LF+ M+ PD T VI A +
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G +H + GF D V N L+ MY++ G E +VF M + +VSW TMI+ Y
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ +A+ + M +G PD T+ SVL C+ L L++G ++H L L I
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ N+L+DMY+KC +D+A +F+++ ++V+SWT+++ G LN + AL+ + M +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KPN VTL S+LSACA + +L G+ +H A+R + + + AL+DMY +C + ++
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 555 NQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMI 591
F+ + +A WN +++G G A E F++M+
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 225/456 (49%), Gaps = 10/456 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N NG +++AL D M I D +V+++ +C + + + G +H++V
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ L M+ K G++ A +F +M RD+ SW ++ GY G AL L
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLL 312
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q M VKP+ T VL C + LK G+ +H IR E++V V ALI MY
Sbjct: 313 CQ-MMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYA 371
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC ++ + VF K+ WNA+ISG NG K + LF M VDP+ TL+S
Sbjct: 372 KCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNS 431
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ES 361
++ A + D + R +HGY+I+ GF + V LI +Y G+ E +F+ + +
Sbjct: 432 LLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKD 491
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD+++W+ +I+ Y + A+ + M G P+EIT S+L AC+ G +D G+ L
Sbjct: 492 KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGL 551
Query: 422 HQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNN 479
+ + +S T +ID+ + +++A E+ + + N W + +LG + +
Sbjct: 552 FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGA-LLGSCVIH 610
Query: 480 RSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+ E K + L+P N V L +I SA R
Sbjct: 611 ENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGR 646
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 283/511 (55%), Gaps = 5/511 (0%)
Query: 84 DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKF 143
++M + DE ++++C +G +H V K V +GN L+ +
Sbjct: 126 NTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNC 185
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPC 202
G G A VF +M +RD SWN +IG + GF++EAL ++ M G++PD+ T
Sbjct: 186 GLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVS 245
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VL C D + VH + ++ G V V NAL+ +Y KCG ++ VFD + +R
Sbjct: 246 VLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDER 305
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ ISWNA+I+ + G+YM L +F +M + + P+ +T+SS++ +G KLG EVH
Sbjct: 306 NVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVH 365
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G+ +KM DV + N LI MY G+ +F++M +++VSW MI+ + + L
Sbjct: 366 GFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEY 425
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+AVE + M+A+G P+ +T +VL ACA LG L++G ++H +R G + ++N L
Sbjct: 426 EAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALT 485
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSV 500
DMYSKC C++ A VF+ I ++ +S+ +I+G N S E+L F +M +L ++P+ V
Sbjct: 486 DMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIV 544
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
+ + ++SACA + + GKEIH +R F+ N+LLD+Y RCGR+ A F
Sbjct: 545 SFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCI 604
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DV++WN ++ GY RG+ A F M
Sbjct: 605 QNKDVASWNTMILGYGMRGELDTAINLFEAM 635
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 262/487 (53%), Gaps = 10/487 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
SV L + + + FG ++ +F R F WN LI + AG FD Y
Sbjct: 69 SVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFD-GFGTYNT 127
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M GVKPD T+P VL+ C ++++G+EVH + G++ DV V N L+ Y CG
Sbjct: 128 MVR-AGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCG 186
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL--VDPDFMTLSSV 304
A VFD MP+RD++SWN +I +G Y + L F +M + PD +T+ SV
Sbjct: 187 LFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSV 246
Query: 305 ISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ D+ + R VH Y +K+G V V N L+ +Y G+ + +KVF ++ ++
Sbjct: 247 LPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERN 306
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SW +I+ + A++ +++M EG P+ +TI+S+L LG LG+++H
Sbjct: 307 VISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHG 366
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++ + S + I+N+LIDMY+K A +F+++ +N++SW ++I N +E
Sbjct: 367 FSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYE 426
Query: 484 ALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ R+M + PN+VT ++L ACAR+G L GKEIHA +R+G + D F+ NAL D
Sbjct: 427 AVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTD 486
Query: 543 MYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKL 600
MY +CG + A N FN + RD ++NIL+ GY+ + F +M + + +
Sbjct: 487 MYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSF 546
Query: 601 MGLFRKC 607
MG+ C
Sbjct: 547 MGVVSAC 553
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 260/514 (50%), Gaps = 8/514 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDED--ALVNLVRLCEWKRGYDEGLYLHSVV 121
N+ + L+G E+AL + M + D +V+++ +C +H
Sbjct: 207 NTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYA 266
Query: 122 SKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
K + V++GNA + ++ K G + VF ++ +R++ SWN +I ++ G + +A
Sbjct: 267 LKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDA 326
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L ++ R+ G++P+ T +L G + K G EVH ++ E+DV + N+LI
Sbjct: 327 LDVF-RLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLID 385
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY K G A +F+ M R+ +SWNAMI+ + N + + L M+ P+ +T
Sbjct: 386 MYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVT 445
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++V+ A +G +G+E+H +I++G S D+ V N L MY G + VF+ +
Sbjct: 446 FTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-IS 504
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D VS+ +I Y + +++ + M G PD ++ V+SACA L + G +
Sbjct: 505 VRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKE 564
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H L +R +++ +AN+L+D+Y++C ID A +VF+ I +K+V SW ++ILG +
Sbjct: 565 IHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGE 624
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
A+ F M + ++ +SV+ V++LSAC+ G + G++ + +
Sbjct: 625 LDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYAC 684
Query: 540 LLDMYVRCGRMKPAWNQFN--SNERDVSAWNILL 571
++D+ R G M+ A + S D + W LL
Sbjct: 685 MVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALL 718
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 214/436 (49%), Gaps = 14/436 (3%)
Query: 81 KYLDSMQELNICVDEDALVNLVRLCEWKRGYDE------GLYLHSVVSKTMSHLSVRLGN 134
KY+D++ + +DE N V + E G+ +H K V + N
Sbjct: 322 KYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISN 381
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ + M+ K G A +F KM R++ SWN +I +A+ EA+ L ++M G
Sbjct: 382 SLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQM-QAKGET 440
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P+ TF VL C + L GKE+H +IR G D+ V NAL MY KCG L A+ V
Sbjct: 441 PNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNV 500
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + RD +S+N +I GY + ++ L LF MR + + PD ++ V+SA +
Sbjct: 501 FN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFI 559
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G+E+HG +++ F + V N L+ +Y G + KVF +++KDV SW TMI Y
Sbjct: 560 RQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGY 619
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
D A+ ++ M+ +G D ++ +VLSAC+ G ++ G K ++ +
Sbjct: 620 GMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTH 679
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQ---IPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++D+ + +++A ++ IPD N+ W +++ R++ + E ++ +
Sbjct: 680 THYACMVDLLGRAGLMEEAADLIRGLSIIPDTNI--WGALLGACRIHG-NIELGLWAAEH 736
Query: 492 MLNLKPNSVTLVSILS 507
+ LKP +LS
Sbjct: 737 LFELKPQHCGYYILLS 752
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 150/284 (52%), Gaps = 11/284 (3%)
Query: 318 REVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVF--SRMESKDVVSWTTMISCY 374
++VH Y + GF VS+C LI Y SFG+ +F S S+ W T+I
Sbjct: 54 KQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRAN 113
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ + D TY M G PDE T VL C+ + G ++H +A + G +
Sbjct: 114 SIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDV 172
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML- 493
+ NTL+ Y C A++VF ++P+++ +SW ++I L+ EAL FFR M+
Sbjct: 173 FVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAA 232
Query: 494 --NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGR 549
++P+ VT+VS+L CA + + +H +AL++G+ G + NAL+D+Y +CG
Sbjct: 233 KPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGL-LGGHVKVGNALVDVYGKCGS 291
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
K + F+ +ER+V +WN ++T ++ RG+ A + FR MID
Sbjct: 292 EKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMID 335
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 283/537 (52%), Gaps = 6/537 (1%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
ATK+ N+ +N L G+ L SM + D +LV+ C + GL H
Sbjct: 12 ATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFH 71
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
V + + ++ + KFG A VF M DR++ W +IG Y +AG D
Sbjct: 72 QRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHD 131
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A S+Y M G++P T +L GV +L + +H VI++G+ +DV + N++
Sbjct: 132 VAFSMYNIM-RRQGIQPSSVT---MLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSM 187
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ +Y KCG + A+ +F+ M RD ISWN+++SGY + G + L L I M+ ++PD
Sbjct: 188 LNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQ 247
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T S++SA+ + +G+ VHG++++ G D + LI MYL GN ++F
Sbjct: 248 QTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEG 307
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KDV+SWT MIS + D AV ++ M MP TIASVL+ACA LG+ LG
Sbjct: 308 MMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG 367
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +R + I N+L+ MY+KC ++++ VF ++ ++++SW +I+ G N
Sbjct: 368 TSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQN 427
Query: 479 NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+AL+ F +M +P+S+T+VS+L ACA IGAL GK IH + + +
Sbjct: 428 GHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID 487
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
AL+DMY +CG + A F+ ++D+ +W+ ++ GY G+G A + + +
Sbjct: 488 TALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT 544
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 252/494 (51%), Gaps = 13/494 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ V + V L N+ L+++ K G + A +F M RD+ SWN L+ GYA+ G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
E L L RM G++PD TF ++ L GK VH H++R G E D +
Sbjct: 228 IREVLQLLIRM-KTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET 286
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI MY+KCG++ A +F+GM +D ISW AMISG +N + +F M + V P
Sbjct: 287 SLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMP 346
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T++SV++A +G LG VHGY+++ D+ N L+ MY G+ E+ VF
Sbjct: 347 STATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVF 406
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM +D+VSW ++S + + KA+ + M PD IT+ S+L ACA +G L
Sbjct: 407 DRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALH 466
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H ++ L I+I L+DMYSKC + A + F ++P ++++SW+SII G
Sbjct: 467 QGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYG 526
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDG 534
+ + AL + + ++PN V +SILSAC+ G + G H+ G+
Sbjct: 527 SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRL 586
Query: 535 FLPNALLDMYVRCGRMKPAWN----QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++D+ R GR++ A++ F DV ILL G L + R++
Sbjct: 587 EHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDV--LGILLDACRTTGNVELGDIVAREI 644
Query: 591 IDSK----GNWRKL 600
+ K GN+ +L
Sbjct: 645 VILKPANAGNYVQL 658
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 210/435 (48%), Gaps = 2/435 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G++ + L+ L M+ I D+ +LV + G +H + +
Sbjct: 216 NSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILR 275
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M++K G++ A+ +F M +D+ SW +I G + D A+++
Sbjct: 276 AGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTV 335
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM V P T VL C + G VH +++R + D+ N+L+TMY
Sbjct: 336 FRRML-KSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYA 394
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L ++ VFD M +RD +SWNA++SG+ +NG K L+LF MR+ PD +T+ S
Sbjct: 395 KCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVS 454
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A +G G+ +H +V K + + L+ MY G+ +K F RM +D
Sbjct: 455 LLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQD 514
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
+VSW+++I+ Y + A+ Y G P+ + S+LSAC+ G +D G+ H
Sbjct: 515 LVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFH 574
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ G+ + ++D+ S+ +++A + ++ K + I+L +
Sbjct: 575 SMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNV 634
Query: 483 EALIFFRKMMLNLKP 497
E + ++ LKP
Sbjct: 635 ELGDIVAREIVILKP 649
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 165/332 (49%), Gaps = 5/332 (1%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
S+NA+I+ G + L+ + M PD T S++ A + G H V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
I G+S D + LI Y FG+ + KVF M+ ++VV WTTMI CY + D A
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
Y +M +G P +T+ +LS L +L LH ++ G S + +AN+++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALANSMLNVY 191
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLV 503
KC ++ A +F + ++VISW S++ G +L N + R ++P+ T
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ER 562
S++SA A L GK +H H LR G+ D + +L+ MY++CG + A+ F +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
DV +W +++G + +A FR+M+ S+
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSR 343
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 293/535 (54%), Gaps = 11/535 (2%)
Query: 67 LNELCLNGSLEQALKYLDSM---QELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVS 122
L E+C GS+ +A + L + Q + ++A +++ LC K+ EG +H+ +++
Sbjct: 47 LREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMIT 106
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
SV L + M+ K G L A +F M + +F+WN +IG Y G +L
Sbjct: 107 SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLE 166
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
LY+ M V G+ D TFPC+L+ CG + D + G EVH I+ GY + V V N+++ MY
Sbjct: 167 LYREM-RVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMY 225
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
KC DL AR +FD MP K D +SWN+MIS Y NG+ ++ L LF M++ + P+ T
Sbjct: 226 TKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTF 285
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ + A E K G +H V+K + +V V N LI MY FG E +F M+
Sbjct: 286 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D +SW +M+S + + L +A++ Y M G PD + + S+++A A GN G+++
Sbjct: 346 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE-VFHQIPDKNVISWTSIILGLRLNNR 480
H AM+ GL S + + N+L+DMY+K C K ++ +F ++PDK+V+SWT+II G N
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAKF-CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 464
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
AL FR++ L + + + + SIL AC+ + + KEIH++ +R G++ D L N
Sbjct: 465 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNG 523
Query: 540 LLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++D+Y CG + A F E +DV +W +++ Y G A E F M ++
Sbjct: 524 IVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 578
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 285/532 (53%), Gaps = 5/532 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +L+ M+ I +D +++ C + G +H + K
Sbjct: 149 NAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIK 208
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
V + N+ + M+ K DL A +F +M ++ D+ SWN +I Y+ G EAL
Sbjct: 209 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALR 268
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M + P+ YTF L+ C +K+G +H V++ Y +V V NALI MY
Sbjct: 269 LFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 327
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ G + A +F M D ISWN+M+SG+ +NG Y + L + MR+ PD + +
Sbjct: 328 ARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 387
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S+I+AS G+ G ++H Y +K G D+ V N L+ MY F + + + +F +M K
Sbjct: 388 SIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 447
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVVSWTT+I+ + + +A+E ++ ++ EG D + I+S+L AC+ L + ++H
Sbjct: 448 DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIH 507
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+R GL S +++ N ++D+Y +C +D A +F I K+V+SWTS+I N +
Sbjct: 508 SYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLAN 566
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EAL F M ++P+S++LVSILSA A + AL GKEIH +R G +G L + L+
Sbjct: 567 EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 626
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
DMY RCG ++ + N FN +D+ W ++ Y G G A + FR+M D
Sbjct: 627 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMED 678
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 196/355 (55%), Gaps = 2/355 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG +AL++ M++ D A+++++ G+ +H+ K
Sbjct: 352 NSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMK 411
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+++GN+ + M+ KF + + +F KM D+D+ SW +I G+A+ G AL L
Sbjct: 412 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 471
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R + G+ DV +L C G+ + KE+H ++IR G +D+ + N ++ +Y
Sbjct: 472 F-REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYG 529
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG++ A +F+ + +D +SW +MIS Y NG + L LF +M+E V+PD ++L S
Sbjct: 530 ECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS 589
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA+ + K G+E+HG++I+ GF + S+ + L+ MY G E+ VF+ + +KD
Sbjct: 590 ILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 649
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+V WT+MI+ Y A++ ++ ME E PD I +VL AC+ G ++ G
Sbjct: 650 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 704
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
NGS +AL+ +Q I +D + +++ C + +HS ++ K +S L
Sbjct: 462 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV-- 519
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N + ++ + G++ +A +F + +D+ SW +I Y G +EAL L+ M G
Sbjct: 520 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 579
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+PD + +L + LK+GKE+H +IR G+ + + + L+ MY +CG L ++
Sbjct: 580 -VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 638
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VF+ + +D + W +MI+ Y +G + LF M + + PD + +V+ A
Sbjct: 639 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 698
Query: 312 GDEKLGR 318
G GR
Sbjct: 699 GLMNEGR 705
>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 885
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 285/521 (54%), Gaps = 3/521 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +K M++ NIC +E L +++ G +H KT L + +G
Sbjct: 173 GCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVG 232
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + ++ KFG++ A VF M +++ SWN L+ GYA+ G L L+ RM +
Sbjct: 233 SALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECE-M 291
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
YT VL+ C +L+ GK +H IR YE D + L+ MY KCG A
Sbjct: 292 NFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALK 351
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + + D ++W+A+I+G + G + LF +MR+ V P+ + +SVISA+ VGD
Sbjct: 352 VFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGD 411
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+ +H + K G+ D SV N LI MY+ G ++G +VF M ++D+VSW ++S
Sbjct: 412 LYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSG 471
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ D+ + + M EG +P+ T VL +C+ L N+ G ++H ++ L
Sbjct: 472 FYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGN 531
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ LIDMY+K +C++ A F+++ ++++ +WT II G +++ +A+ + +M+
Sbjct: 532 DFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLR 591
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KPN TL S LS C+R+ L G+++H+ A++ G + D F+ +AL+DMY +CG M+
Sbjct: 592 EGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMED 651
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F RD AWN ++ GY++ GQG A E FR M+D
Sbjct: 652 AEAIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLD 692
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 258/494 (52%), Gaps = 5/494 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C K +EG +H V K+ L + ++++ K G L A V M +RD
Sbjct: 99 MLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERD 158
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW LI GY G + + Y M + P+ +T VL+ D+K GK +H
Sbjct: 159 VVSWTALIAGYVSEGCGSDGVKAYCEM-RKENICPNEFTLATVLKASSMCSDIKFGKLIH 217
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ I+ G D+ V +AL+ +Y K G++ A VF GMP+++ +SWNA+++GY + G+
Sbjct: 218 LEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGK 277
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPL 339
L LF M E ++ TLS+V+ G+ + G+ +H I+ + D+ CN L
Sbjct: 278 NVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCN-L 336
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G E KVF+ +E D+V+W+ +I+ + +A E + +M +G P++
Sbjct: 337 VDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQ 396
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ ASV+SA +G+L LG +H + G S + N LI MY K + + VF
Sbjct: 397 FSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDT 456
Query: 460 IPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
+ +++++SW +++ G S + L IF + +M L PN T V +L +C+ + + G
Sbjct: 457 MTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFG 516
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
K++HAH ++ + + F+ AL+DMY + ++ A FN RD+ W +++ G+++
Sbjct: 517 KQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQT 576
Query: 578 GQGALAEEFFRKMI 591
+ A ++ +M+
Sbjct: 577 DKAEKAVKYLGQML 590
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 244/459 (53%), Gaps = 4/459 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ LN G + LK M E + L +++ C EG LHS+ +
Sbjct: 264 NALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIR 323
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L LG + M+ K G A VF + + D+ +W+ +I G + G EA L
Sbjct: 324 RAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAEL 383
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV+P+ ++F V+ V DL G+ +H + ++GYE+D V NALITMY+
Sbjct: 384 FHLMRQ-KGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYM 442
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLS 302
K G + VFD M RD +SWNA++SG+++ +GL +F M+ E LV P+ T
Sbjct: 443 KSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLV-PNLYTFV 501
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+ + + + G++VH ++IK + V LI MY E+ + F+++ ++
Sbjct: 502 GVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNR 561
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D+ +WT +I+ + + +KAV+ M EG P+E T+AS LS C+ + L G +LH
Sbjct: 562 DLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLH 621
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
LA+++G + +++ L+DMY KC C++ A +F + ++ ++W +II G + +
Sbjct: 622 SLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQGQ 681
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
+AL FR M+ ++ P+ VT + +L+AC+ +G + GK+
Sbjct: 682 KALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKK 720
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 166/315 (52%), Gaps = 1/315 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H + K +GNA ++M++K G + VF M +RDL SWN L+ G+
Sbjct: 415 GQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYD 474
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
D+ L ++ +M + G+ P++YTF VLR+C + ++ GK+VH H+I+ + +
Sbjct: 475 FETSDQGLRIFCQML-MEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDF 533
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ALI MY K L A + F+ + RD +W +I+G+ + + K + M
Sbjct: 534 VGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREG 593
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P+ TL+S +S + G+++H IK G S DV V + L+ MY G E+ E
Sbjct: 594 IKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAE 653
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F + S+D V+W T+I Y KA+E ++MM E PDE+T VL+AC+ +G
Sbjct: 654 AIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMG 713
Query: 414 NLDLGIKLHQLAMRT 428
++ G K L ++
Sbjct: 714 WVEEGKKHFDLMSKS 728
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+ +L CA GNL+ G +H +++GL + +LI++Y+KC + A +V + +
Sbjct: 97 SGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRE 156
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEI 521
++V+SWT++I G + + + +M N+ PN TL ++L A + + GK I
Sbjct: 157 RDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLI 216
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQG 580
H A++ G+ D F+ +AL+D+Y + G M+ A F E++ +WN LL GYA+RG G
Sbjct: 217 HLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDG 276
Query: 581 ALAEEFFRKMIDSKGNW 597
+ F +M++ + N+
Sbjct: 277 KNVLKLFCRMLECEMNF 293
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 313/600 (52%), Gaps = 17/600 (2%)
Query: 8 KTSQTPLRQNLRNPKTRIP-ETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP--- 63
+ S+ + Q+++N +P +Y N V QN +K P
Sbjct: 18 RLSEREVAQDIKNKAITLPMRLRYYVMAAPIPSFYLNCHPVLKKIHQNPPLKISKFPLKP 77
Query: 64 --NSRLNELCLNGSLEQALKYLDSM---QELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
L E+C GS+ +A + L + Q + ++A +++ LC K+ EG +H
Sbjct: 78 VETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVH 137
Query: 119 S-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
+ +++ SV L + M+ K G L A +F M + +F+WN +IG Y G
Sbjct: 138 AHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEP 197
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+L LY+ M V G+ D TFPC+L+ CG + D + G EVH I+ GY + V V N+
Sbjct: 198 LGSLELYREM-RVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANS 256
Query: 238 LITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
++ MY KC DL AR +FD MP K D +SWN+MIS Y NG+ ++ L LF M++ + P
Sbjct: 257 IVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAP 316
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ T + + A E K G +H V+K + +V V N LI MY FG E +F
Sbjct: 317 NTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF 376
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M+ D +SW +M+S + + L +A++ Y M G PD + + S+++A A GN
Sbjct: 377 YNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTL 436
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE-VFHQIPDKNVISWTSIILGL 475
G+++H AM+ GL S + + N+L+DMY+K C K ++ +F ++PDK+V+SWT+II G
Sbjct: 437 NGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF-CSMKYMDCIFDKMPDKDVVSWTTIIAGH 495
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N AL FR++ L + + + + SIL AC+ + + KEIH++ +R G++ D
Sbjct: 496 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DL 554
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
L N ++D+Y CG + A F E +DV +W +++ Y G A E F M ++
Sbjct: 555 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 614
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 285/532 (53%), Gaps = 5/532 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +L+ M+ I +D +++ C + G +H + K
Sbjct: 185 NAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIK 244
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
V + N+ + M+ K DL A +F +M ++ D+ SWN +I Y+ G EAL
Sbjct: 245 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALR 304
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M + P+ YTF L+ C +K+G +H V++ Y +V V NALI MY
Sbjct: 305 LFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 363
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ G + A +F M D ISWN+M+SG+ +NG Y + L + MR+ PD + +
Sbjct: 364 ARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 423
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S+I+AS G+ G ++H Y +K G D+ V N L+ MY F + + + +F +M K
Sbjct: 424 SIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 483
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVVSWTT+I+ + + +A+E ++ ++ EG D + I+S+L AC+ L + ++H
Sbjct: 484 DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIH 543
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+R GL S +++ N ++D+Y +C +D A +F I K+V+SWTS+I N +
Sbjct: 544 SYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLAN 602
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EAL F M ++P+S++LVSILSA A + AL GKEIH +R G +G L + L+
Sbjct: 603 EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 662
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
DMY RCG ++ + N FN +D+ W ++ Y G G A + FR+M D
Sbjct: 663 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMED 714
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 196/355 (55%), Gaps = 2/355 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG +AL++ M++ D A+++++ G+ +H+ K
Sbjct: 388 NSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMK 447
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+++GN+ + M+ KF + + +F KM D+D+ SW +I G+A+ G AL L
Sbjct: 448 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 507
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R + G+ DV +L C G+ + KE+H ++IR G +D+ + N ++ +Y
Sbjct: 508 F-REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYG 565
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG++ A +F+ + +D +SW +MIS Y NG + L LF +M+E V+PD ++L S
Sbjct: 566 ECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS 625
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA+ + K G+E+HG++I+ GF + S+ + L+ MY G E+ VF+ + +KD
Sbjct: 626 ILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 685
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+V WT+MI+ Y A++ ++ ME E PD I +VL AC+ G ++ G
Sbjct: 686 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 740
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
NGS +AL+ +Q I +D + +++ C + +HS ++ K +S L
Sbjct: 498 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV-- 555
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N + ++ + G++ +A +F + +D+ SW +I Y G +EAL L+ M G
Sbjct: 556 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETG 615
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+PD + +L + LK+GKE+H +IR G+ + + + L+ MY +CG L ++
Sbjct: 616 -VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 674
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VF+ + +D + W +MI+ Y +G + LF M + + PD + +V+ A
Sbjct: 675 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 734
Query: 312 GDEKLGR 318
G GR
Sbjct: 735 GLMNEGR 741
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 291/541 (53%), Gaps = 12/541 (2%)
Query: 55 TSSIATKNPNSRLNELCLN-GSLEQALKYLDSMQELNICVD---EDALVNLVRLCEWKRG 110
++SI T P ++ LN G+L+ A + L + + E A L+ LC +
Sbjct: 2 STSILTPLPLKPISVNTLNKGTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKA 61
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+G LH+++ K SHLS L + M+ K G L A VF +M +R +FSWN L+G
Sbjct: 62 LPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGA 119
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ +G + EA+ LY+ M V GV D TFP VL+ CG + + + G E+H ++ GY
Sbjct: 120 FVSSGKYLEAIELYKDM-RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGE 178
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
V V NALI MY KCGDL AR++FDG M K D +SWN++IS + G ++ L LF
Sbjct: 179 FVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRR 238
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M+EV V + T + + E KLG +HG V+K DV V N LI MY G
Sbjct: 239 MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGR 298
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E+ +VF M +D VSW T++S + L A+ ++ M+ G PD++++ ++++A
Sbjct: 299 MEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAA 358
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
GNL G ++H A+R GL S + I NTL+DMY+KC C+ F + +K++ISW
Sbjct: 359 SGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISW 418
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
T+II G N EA+ FRK+ + + + + + S+L AC+ + + +EIH + +
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
+A D L NA++++Y G + A F S +D+ +W ++T G A E
Sbjct: 479 RDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 587 F 587
F
Sbjct: 538 F 538
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 281/536 (52%), Gaps = 12/536 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + +G +A++ M+ L + +D ++++ C G +H V K
Sbjct: 114 NALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVK 173
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVF-GKMCDR-DLFSWNVLIGGYAKAGFFDEAL 181
V + NA ++M+ K GDLG A +F G M ++ D SWN +I + G EAL
Sbjct: 174 CGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEAL 233
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVIRFGYEADVDVVNAL 238
SL++RM VG V + YTF L+ GV D +K G +H V++ + ADV V NAL
Sbjct: 234 SLFRRMQEVG-VASNTYTFVAALQ---GVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
I MY KCG + A VF+ M RD +SWN ++SG +N Y L F M+ PD
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+++ ++I+AS G+ G+EVH Y I+ G ++ + N L+ MY + F
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFEC 409
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KD++SWTT+I+ Y + +A+ ++ ++ +G D + I SVL AC+ L + +
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H + L I++ N ++++Y + ID A F I K+++SWTS+I N
Sbjct: 470 REIHGYVFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHN 528
Query: 479 NRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EAL +F+ N++P+S+ ++S LSA A + +L GKEIH +R G +G +
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++L+DMY CG ++ + F+S +RD+ W ++ G G A F+KM D
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTD 644
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 245/457 (53%), Gaps = 3/457 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G+ +AL MQE+ + + V ++ E G+ +H V K
Sbjct: 217 NSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLK 276
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + NA ++M+ K G + A VF M RD SWN L+ G + + +AL+
Sbjct: 277 SNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNY 336
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G KPD + ++ G +L +GKEVH + IR G ++++ + N L+ MY
Sbjct: 337 FRDM-QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYA 395
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + F+ M ++D ISW +I+GY +N +++ + LF ++ +D D M + S
Sbjct: 396 KCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGS 455
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + RE+HGYV K +D + + N ++ +Y G+ + + F + SKD
Sbjct: 456 VLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHIDYARRAFESIRSKD 514
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSWT+MI+C + LP +A+E + ++ PD I I S LSA A L +L G ++H
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G IA++L+DMY+ C ++ + ++FH + +++I WTS+I ++ +
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNK 634
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
A+ F+KM N+ P+ +T +++L AC+ G ++ GK
Sbjct: 635 AIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 207/402 (51%), Gaps = 5/402 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ L N AL Y MQ D+ +++NL+ +G +H+ +
Sbjct: 318 NTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIR 377
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++GN + M+ K + + + F M ++DL SW +I GYA+ F EA++L
Sbjct: 378 NGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINL 437
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ V G+ D VLR C G+ +E+H +V + AD+ + NA++ +Y
Sbjct: 438 FRKV-QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYG 495
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ G + AR F+ + +D +SW +MI+ NG ++ L LF +++ + PD + + S
Sbjct: 496 EVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIIS 555
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SA+ + K G+E+HG++I+ GF + + + L+ MY G E K+F ++ +D
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRD 615
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++ WT+MI+ +KA+ ++ M + +PD IT ++L AC+ G + G + +
Sbjct: 616 LILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFE 675
Query: 424 LAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ M+ G L + ++D+ S+ +++A +P K
Sbjct: 676 I-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIK 716
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 6/281 (2%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+++H ++K S + L+ MY G+ + KVF M + + SW ++ +
Sbjct: 65 GQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVS 122
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
S +A+E Y+ M G D T SVL AC LG LG ++H +A++ G ++ +
Sbjct: 123 SGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFV 182
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
N LI MY KC + A +F I ++ +SW SII EAL FR+M +
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEV 242
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ N+ T V+ L + G IH L+ D ++ NAL+ MY +CGRM+ A
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 554 WNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S RD +WN LL+G + + A +FR M +S
Sbjct: 303 GRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNS 343
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 266/497 (53%), Gaps = 4/497 (0%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C + EG +H + + L N +SM+ K G + A VF M D+D+ SW
Sbjct: 61 CVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSW 120
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N +I GYA G EA+ L+ +M G+KP+ +F +L C L+ G+++H H+
Sbjct: 121 NAMISGYALHGRGQEAVDLFYQM-QREGLKPNQNSFISILSACQTPIVLEFGEQIHSHIT 179
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ GYE+DV+V ALI MY KCG L AR VF+ M +R+ +SW AMISGY ++G+ + +
Sbjct: 180 KAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFV 239
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF + P+ ++ +S++ A D + G ++H Y+ + G +V V N LI MY
Sbjct: 240 LFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYA 299
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ +VF + S + VSW MI+ Y G ++A ++ M+ +G PD T AS
Sbjct: 300 RCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRDMQQKGFQPDRFTYAS 358
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L+ CA +L+ G +LH +RT + + +A LI MY+KC +++A +VF+Q+P+KN
Sbjct: 359 LLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKN 418
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW + I + EA F++M ++ P+ VT +++L++C G+ IH
Sbjct: 419 AVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHG 478
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGAL 582
+ G+ + + NAL+ MY RCG++ A F RD+ +WN ++ Y + G
Sbjct: 479 KIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGS 538
Query: 583 AEEFFRKMIDSKGNWRK 599
A + F K G K
Sbjct: 539 AFDLFIKYKSEGGKGDK 555
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 283/529 (53%), Gaps = 4/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L+G ++A+ MQ + ++++ ++++ C+ + G +HS ++K
Sbjct: 121 NAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITK 180
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + A ++M+ K G L A VF +M +R++ SW +I GY + G EA L
Sbjct: 181 AGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVL 240
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q++ G +P+ +F +L C DL++G ++H ++ + G E +V V NALI+MY
Sbjct: 241 FQKLI-RSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYA 299
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG L AR VFD + +R+SWNAMI+GY E G + LF M++ PD T +S
Sbjct: 300 RCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYAS 358
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ D G+E+H +++ + DV+V LI MY G+ EE KVF++M K+
Sbjct: 359 LLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKN 418
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW I+C +A + ++ M + +PD +T ++L++C + + G +H
Sbjct: 419 AVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHG 478
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ G++S ++AN LI MY +C + A EVF++I +++ SW ++I + +
Sbjct: 479 KIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGS 538
Query: 484 AL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A +F + K + T +++L A A + L G++IH + G+ D + L+
Sbjct: 539 AFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIK 598
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG ++ A++ F N E+DV WN +L Y G A + F++M
Sbjct: 599 MYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQM 647
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 252/490 (51%), Gaps = 34/490 (6%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICV-------------DEDALVNLVRL--------- 104
+N C GSLE A K + M+E N+ ++A V +L
Sbjct: 194 INMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNK 253
Query: 105 ---------CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
C ++GL LH+ + + V +GNA +SM+ + G L +A VF
Sbjct: 254 VSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDN 313
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+ + SWN +I GY + GF +EA L++ M G +PD +T+ +L C DL R
Sbjct: 314 LRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDM-QQKGFQPDRFTYASLLAICADRADLNR 371
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GKE+H ++R +EADV V ALI+MY KCG L AR VF+ MP+++ +SWNA I+
Sbjct: 372 GKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCR 431
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+G + +F MR V PD +T +++++ D + GR +HG + + G + V
Sbjct: 432 HGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLV 491
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N LI MY G + +VF R+ +D+ SW MI+ Y A + + ++EG
Sbjct: 492 ANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGG 551
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D+ T +VL A A L +LD G K+H L + GL I I TLI MYSKC + A
Sbjct: 552 KGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYS 611
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
VF + +K+V+ W +++ ++ +AL F++M L + P+S T S+L+ACAR+GA
Sbjct: 612 VFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGA 671
Query: 515 LMCGKEIHAH 524
+ GK+ H
Sbjct: 672 IEHGKKFHTQ 681
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 211/403 (52%), Gaps = 7/403 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+ ++ + L+ C L GK+VH H+ +E D+ + N LI+MY KCG + A
Sbjct: 46 GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF M +D +SWNAMISGY +G + + LF M+ + P+ + S++SA +
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTP 165
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G ++H ++ K G+ DV+V LI MY G+ E KVF+ M ++VVSWT MI
Sbjct: 166 IVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 225
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y +A +Q + G+ P++++ AS+L AC +L+ G+KLH + GL
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF--EALIFFR 489
+++ N LI MY++C + A +VF + N +SW ++I G F EA FR
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY---GEGFMEEAFRLFR 342
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M +P+ T S+L+ CA L GKE+H+ +R D + AL+ MY +CG
Sbjct: 343 DMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCG 402
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A FN E++ +WN + G A + F++M
Sbjct: 403 SLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQM 445
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 267/500 (53%), Gaps = 3/500 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
VD V L++ C + G +H + + +V + N L ++V G + A +
Sbjct: 42 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRL 101
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F K ++ + SWNV+I GYA G EA +L+ M G++PD +TF +L C
Sbjct: 102 FDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLM-QQEGLEPDKFTFVSILSACSSPAA 160
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L G+EVHV V+ G + V NALI+MY KCG + AR VFD M RD +SW +
Sbjct: 161 LNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 220
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y E+G + L + M + V P +T +V+SA + + G+++H +++ D
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V L KMY+ G ++ +VF + ++DV++W TMI S ++A + M
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
E PD +T ++LSACA G L G ++H A++ GL+S + N LI+MYSK +
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +VF ++P ++V+SWT+++ G + E+ F+KM+ ++ N +T + +L AC+
Sbjct: 401 ARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSN 460
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
AL GKEIHA ++ G+ D + NAL+ MY +CG ++ A + RDV WN L
Sbjct: 461 PVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTL 520
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ G A+ G+G A + F M
Sbjct: 521 IGGLAQNGRGLEALQKFEVM 540
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 239/420 (56%), Gaps = 4/420 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + D Y + +L++C DL GK+VH H++RFG + +V ++N L+ +YV CG + A
Sbjct: 39 GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD + +SWN MISGY G + LF +M++ ++PD T S++SA
Sbjct: 99 RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GREVH V++ G +++ +V N LI MY G+ + +VF M S+D VSWTT+
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y S ++++TY M EG P IT +VLSAC L L+ G ++H + +
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ L MY KC + A EVF +P+++VI+W ++I GL + + EA F +M
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + P+ VT ++ILSACAR G L CGKEIHA A++ G+ D NAL++MY + G M
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSM 398
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
K A F+ +RDV +W L+ GYA+ GQ + F+KM+ + N M + + C
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 232/434 (53%), Gaps = 2/434 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A MQ+ + D+ V+++ C + G +H V + + +GNA
Sbjct: 127 QEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNAL 186
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ K G + A VF M RD SW L G YA++G+ E+L Y M GV+P
Sbjct: 187 ISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQ-EGVRPS 245
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T+ VL CG + L++GK++H ++ + +DV V AL MY+KCG + AR VF+
Sbjct: 246 RITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFE 305
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+P RD I+WN MI G ++G+ + +F M + V PD +T +++SA G
Sbjct: 306 CLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC 365
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+E+H +K G DV N LI MY G+ ++ +VF RM +DVVSWT ++ Y
Sbjct: 366 GKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYAD 425
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
++ T++ M +G ++IT VL AC+ L G ++H ++ G+ + + +
Sbjct: 426 CGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAV 485
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
AN L+ MY KC ++ A+ V + ++V++W ++I GL N R EAL F M +
Sbjct: 486 ANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEM 545
Query: 496 KPNSVTLVSILSAC 509
+PN+ T V+++SAC
Sbjct: 546 RPNATTFVNVMSAC 559
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 224/437 (51%), Gaps = 7/437 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +++LK +M + + +N++ C ++G +H+ + ++ H VR+
Sbjct: 224 SGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRV 283
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A M++K G + A VF + +RD+ +WN +IGG +G +EA ++ RM
Sbjct: 284 STALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRML-KEC 342
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD T+ +L C L GKE+H ++ G +DV NALI MY K G + AR
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDAR 402
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MPKRD +SW A++ GY + G+ ++ F M + V+ + +T V+ A
Sbjct: 403 QVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G+E+H V+K G D++V N L+ MY G+ E+ +V M ++DVV+W T+I
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--GL 430
+ +A++ +++M++E P+ T +V+SAC ++ G + +MR G+
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEG-RRQFASMRKDYGI 581
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFR 489
+ ++D+ ++ + +A +V +P K + W +++ R + + E
Sbjct: 582 VPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHG-NVEIGEQAA 640
Query: 490 KMMLNLKP-NSVTLVSI 505
+ L L+P N+ T VS+
Sbjct: 641 EQCLKLEPQNAGTYVSL 657
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 1/244 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L +G LE+A M + + D + ++ C G G +H+ K
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVK 375
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
VR GNA ++M+ K G + A VF +M RD+ SW L+GGYA G E+ S
Sbjct: 376 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFST 435
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M GV+ + T+ CVL+ C LK GKE+H V++ G AD+ V NAL++MY
Sbjct: 436 FKKMLQ-QGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYF 494
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A V +GM RD ++WN +I G +NG ++ L F +M+ + P+ T +
Sbjct: 495 KCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVN 554
Query: 304 VISA 307
V+SA
Sbjct: 555 VMSA 558
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ Q + +GS D +L +C +L +G ++H+ +R G+ + I NTL+ +
Sbjct: 29 ADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL 88
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
Y C +++A +F + +K+V+SW +I G EA F M L+P+ T
Sbjct: 89 YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
VSILSAC+ AL G+E+H + G+A + + NAL+ MY +CG ++ A F++
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RD +W L YAE G + + + M+
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQ 239
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 264/478 (55%), Gaps = 6/478 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS L +R+GNA + M+ K G + A VF M +RD+FSW V+IGG A+ G
Sbjct: 153 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGR 212
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDV 234
EA SL+ +M GG P++ T+ +L L+ KEVH H + G+ +D+ V
Sbjct: 213 GQEAFSLFLQME-RGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRV 271
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NALI MY KCG + ARLVFDGM RD ISWNAMI G +NG + +F+ M++
Sbjct: 272 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGF 331
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T S+++ G + +EVH + +++G D+ V + + MY+ G+ ++ +
Sbjct: 332 VPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQL 391
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F ++ ++V +W MI +A+ + M EG PD T ++LSA
Sbjct: 392 IFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEA 451
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L+ ++H A+ GL+ + + N L+ MY+KC A +VF + ++NV +WT +I G
Sbjct: 452 LEWVKEVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISG 510
Query: 475 LRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
L + EA F +M+ + P++ T VSILSACA GAL KE+H+HA+ G+ D
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+ MY +CG + A F+ ERDV +W +++ G A+ G+G A + F KM
Sbjct: 571 LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKM 628
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 268/522 (51%), Gaps = 6/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A+K M+ +E +++++ C G +H+ + ++ VR+
Sbjct: 9 GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE 68
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A ++M+VK G + A +F KM +R++ SW V+IGG A G EA + +M G +
Sbjct: 69 TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ YT+ +L L+ KEVH H + G D+ V NAL+ MY K G + AR+
Sbjct: 129 -PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 187
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDGM +RD SW MI G ++G + LF+ M P+ T S+++AS +
Sbjct: 188 VFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITST 247
Query: 314 EKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
L +EVH + K GF D+ V N LI MY G+ ++ VF M +DV+SW MI
Sbjct: 248 GALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMI 307
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A + M+ EG +PD T S+L+ G + ++H+ A+ GL+
Sbjct: 308 GGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLV 367
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + + + + MY +C ID A +F ++ +NV +W ++I G+ EAL F +M
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQM 427
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
P++ T V+ILSA AL KE+H++A+ G+ D + NAL+ MY +CG
Sbjct: 428 RREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNT 486
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F+ ER+V+ W ++++G A+ G G A F +M+
Sbjct: 487 MYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQML 528
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 235/428 (54%), Gaps = 5/428 (1%)
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+IGGYA+ G+ ++A+ +Y +M GG +P+ T+ +L+ C LK GK++H H+I+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+++DV V AL+ MYVKCG + A+L+FD M +R+ ISW MI G G + F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ M+ P+ T S+++A+ G + +EVH + + G + D+ V N L+ MY
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ ++ VF M +D+ SWT MI +A + ME G +P+ T S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 407 SACA--CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+A A G L+ ++H+ A + G IS + + N LI MY+KC ID A VF + D++
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
VISW ++I GL N EA F KM P+S T +S+L+ GA KE+H
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
HA+ +G+ D + +A + MY+RCG + A F+ R+V+ WN ++ G A++ G
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419
Query: 583 AEEFFRKM 590
A F +M
Sbjct: 420 ALSLFLQM 427
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 219/393 (55%), Gaps = 7/393 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+R+GNA + M+ K G + A VF MCDRD+ SWN +IGG A+ G EA +++ +M
Sbjct: 269 LRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ 328
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G V PD T+ +L T + KEVH H + G +D+ V +A + MY++CG +
Sbjct: 329 EGFV-PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSID 387
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+L+FD + R+ +WNAMI G + + L LF+ MR PD T +++SA+
Sbjct: 388 DAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSAN- 446
Query: 310 LVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
VG+E L +EVH Y I G D + V N L+ MY GN ++VF M ++V +W
Sbjct: 447 -VGEEALEWVKEVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MIS +A + M EG +PD T S+LSACA G L+ ++H A+
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVN 564
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL+S + + N L+ MY+KC +D A VF + +++V SWT +I GL + R +AL
Sbjct: 565 AGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDL 624
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
F KM L KPN + V++LSAC+ G + G+
Sbjct: 625 FVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGR 657
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 223/450 (49%), Gaps = 13/450 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL----VRLCEWKRGYDEGLYLHS 119
N+ + L NG +A MQ+ D ++L V W+ + + ++ H+
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE--WVKEVHKHA 361
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V +S L R+G+AF+ M+++ G + A +F K+ R++ +WN +IGG A+ E
Sbjct: 362 VEVGLVSDL--RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
ALSL+ +M G PD TF +L G L+ KEVH + I G D+ V NAL+
Sbjct: 420 ALSLFLQMR-REGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALV 477
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDF 298
MY KCG+ + A+ VFD M +R+ +W MISG ++G + LF+ M+RE +V PD
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIV-PDA 536
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T S++SA G + +EVH + + G D+ V N L+ MY G+ ++ +VF
Sbjct: 537 TTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M +DV SWT MI A++ + M+ EG P+ + +VLSAC+ G +D G
Sbjct: 597 MLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEG 656
Query: 419 IK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
+ L G+ + ++D+ + +++A +P + + +LG +
Sbjct: 657 RRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACV 716
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ E F K L LKP S + +LS
Sbjct: 717 TYGNLEMAEFAAKERLKLKPKSASTYVLLS 746
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 260/472 (55%), Gaps = 4/472 (0%)
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
S S L ++ + + G HA +F ++ + LFSWN +I Y +G +AL L+
Sbjct: 52 SPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFV 111
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+M G PD YT+P V++ CG + G +H + G+++D V N+L+ MY+ C
Sbjct: 112 QMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNC 171
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G++ AR VFD M +R +SWN MI+GYF+NG + LM+F M ++PD T+ SV+
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ + ++GR VH V +D+SV N L+ MY GN +E + +F M+ +DVV
Sbjct: 232 PVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVV 291
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTM++ Y + A+ QMM+ E P+ +T+ASVLSACA L +L G LH A
Sbjct: 292 SWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA 351
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+R L S +I+ LIDMY+KC ++ + VF + + W +II G N S +A+
Sbjct: 352 IRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAI 411
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F++M++ + PN TL S+L A A + L + +H + +R G + L+D+Y
Sbjct: 412 ELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIY 471
Query: 545 VRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+CG ++ A N FN ++D+ W+ ++ GY G G A F +M+ S
Sbjct: 472 SKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 237/428 (55%), Gaps = 11/428 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
N+ ++M++ G++ A VF M +R L SWN +I GY K G EAL ++ M +G G
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM--IGKG 219
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD T VL C + +L+ G+ VH V D+ V N+L+ MY KCG++ A+
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQ 279
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F M KRD +SW M++GY NG+ L+L MM+ V P+F+TL+SV+SA +
Sbjct: 280 MIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLY 339
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K GR +HG+ I+ +V V LI MY N +VFS+ + W +IS
Sbjct: 340 SLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIIS 399
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ L KA+E ++ M E P++ T+ S+L A A L +L +H +R+G +S
Sbjct: 400 GCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLS 459
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRK 490
I +A LID+YSKC ++ A +F+ IP DK++I+W++II G ++ A+ F +
Sbjct: 460 RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQ 519
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL---RIGVAFDGFLPNALLDMYVR 546
M+ + +KPN +T SIL AC+ G + G + L ++ + D + ++D+ R
Sbjct: 520 MVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHY--TCVIDLLGR 577
Query: 547 CGRMKPAW 554
GR++ A+
Sbjct: 578 AGRLEEAY 585
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 207/398 (52%), Gaps = 6/398 (1%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV---DVVNALITMYVKCGDLVRARLVFD 256
+ +L+ C + K++H H I G + ++++L Y CG AR +FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEK 315
+ SWNAMI Y +G L LF+ M+ PD T VI A +
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G +H + GF D V N L+ MY++ G E +VF M + +VSW TMI+ Y
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ +A+ + M +G PD T+ SVL C+ L L++G ++H L L I
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ N+L+DMY+KC +D+A +F+++ ++V+SWT+++ G LN + AL+ + M +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KPN VTL S+LSACA + +L G+ +H A+R + + + AL+DMY +C + ++
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380
Query: 555 NQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMI 591
F+ + +A WN +++G G A E F++M+
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQML 418
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 225/456 (49%), Gaps = 10/456 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N NG +++AL D M I D +V+++ +C + + + G +H++V
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ L M+ K G++ A +F +M RD+ SW ++ GY G AL L
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLL 312
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q M VKP+ T VL C + LK G+ +H IR E++V V ALI MY
Sbjct: 313 CQ-MMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYA 371
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC ++ + VF K+ WNA+ISG NG K + LF M VDP+ TL+S
Sbjct: 372 KCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNS 431
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ES 361
++ A + D + R +HGY+I+ GF + V LI +Y G+ E +F+ + +
Sbjct: 432 LLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKD 491
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD+++W+ +I+ Y + A+ + M G P+EIT S+L AC+ G +D G+ L
Sbjct: 492 KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGL 551
Query: 422 HQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNN 479
+ + +S T +ID+ + +++A E+ + + N W + +LG + +
Sbjct: 552 FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGA-LLGSCVIH 610
Query: 480 RSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+ E K + L+P N V L +I SA R
Sbjct: 611 ENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGR 646
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 259/457 (56%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F ++G + A VF + + ++ ++ G+AK D+AL + RM + V+P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY-DDVEP 133
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG +L+ GKE+H +++ G+ D+ + L MY KC + AR VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD +SWN +++GY +NG L + M E + P F+T+ SV+ A +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+E+HGY ++ GF V++ L+ MY G+ E ++F M ++VVSW +MI Y
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P +A+ +Q M EG P ++++ L ACA LG+L+ G +H+L++ GL +
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N+LI MY KCK +D A +F ++ + ++SW ++ILG N R +AL +F +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP++ T VS+++A A + K IH +R + + F+ AL+DMY +CG + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +ER V+ WN ++ GY G G A E F +M
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 248/484 (51%), Gaps = 7/484 (1%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++AL++ M+ ++ L+++C + G +H ++ K+ L +
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+M+ K + A VF +M +RDL SWN ++ GY++ G AL + + M +KP
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKP 234
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
T VL + + GKE+H + +R G+++ V++ AL+ MY KCG L AR +F
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
DGM +R+ +SWN+MI Y +N + +++F M + V P +++ + A +GD +
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR +H +++G +VSV N LI MY + +F +++S+ +VSW MI +
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P A+ + M + PD T SV++A A L +H + MR+ L +
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ L+DMY+KC I A +F + +++V +W ++I G + AL F +M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 495 LKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+KPN VT +S++SAC+ G + G + + I ++ D + A++D+ R GR+
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAGRLN 592
Query: 552 PAWN 555
AW+
Sbjct: 593 EAWD 596
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 217/405 (53%), Gaps = 13/405 (3%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ +VY P +L C + +L+ ++ V + G + L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ + + + ++ M+ G+ + + K L F+ MR V+P + ++ ++
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL---KV 144
Query: 311 VGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
GDE ++G+E+HG ++K GFS D+ L MY E KVF RM +D+VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+++ Y + + A+E + M E P ITI SVL A + L + +G ++H AMR
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G S + I+ L+DMY+KC ++ A ++F + ++NV+SW S+I N EA++
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM+ +KP V+++ L ACA +G L G+ IH ++ +G+ + + N+L+ MY +
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
C + A + F R + +WN ++ G+A+ G+ A +F +M
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 191/403 (47%), Gaps = 2/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL+ + SM E N+ +V+++ R G +H ++ V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G L A +F M +R++ SWN +I Y + EA+ ++Q+M G
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEG 332
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + L C + DL+RG+ +H + G + +V VVN+LI+MY KC ++ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + R +SWNAMI G+ +NG + L F MR V PD T SVI+A +
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG V++ +V V L+ MY G +F M + V +W MI
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+E ++ M+ P+ +T SV+SAC+ G ++ G+K + I
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 433 YIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ ++D+ + +++A + Q+P K ++ +LG
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 8/296 (2%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++ V K G + L+ ++ +G+ +E +VF ++SK V + TM+ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA++ + M + P +L C L +G ++H L +++G +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
L +MY+KC+ +++A +VF ++P+++++SW +I+ G N + AL + M NLK
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPAW 554
P+ +T+VS+L A + + + GKEIH +A+R G FD + AL+DMY +CG ++ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSG--FDSLVNISTALVDMYAKCGSLETAR 291
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ER+V +WN ++ Y + A F+KM+D K +MG C
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 142/272 (52%), Gaps = 2/272 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N + ++A+ M + + + +++ + C + G ++H + +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + N+ +SM+ K ++ A +FGK+ R L SWN +I G+A+ G +AL+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M VKPD +T+ V+ + K +H V+R + +V V AL+ MY
Sbjct: 426 FSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG ++ ARL+FD M +R +WNAMI GY +G L LF M++ + P+ +T S
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
VISA G + G + Y++K +S ++S+
Sbjct: 545 VISACSHSGLVEAGLKCF-YMMKENYSIELSM 575
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E A +L C+ L L ++ L + GL L+ ++ + +D+A VF
Sbjct: 37 EHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
I K + + +++ G + +AL FF +M + ++P +L C L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GKEIH ++ G + D F L +MY +C ++ A F+ ERD+ +WN ++ GY++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 577 RGQGALAEEFFRKMID 592
G +A E + M +
Sbjct: 214 NGMARMALEMVKSMCE 229
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 281/506 (55%), Gaps = 7/506 (1%)
Query: 89 LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
+ + +D+ +++ C +G +H VV K V +GN L + G L
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
VF +M +RD+ SWN +IG ++ GF+ EA+ L+ M G +P++ + VL C
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
G+ D G+++H +V++ G ++ V V NAL+ +Y KCG + +R VFD + +R+ +SWNA
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 269 MIS--GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
+I+ Y E + L +F +M + V P+ +T SS++ + G+E+HG+ ++
Sbjct: 181 IITSLAYLERNQ--DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G D+ V N LI MY G + VF+++ K++VSW M++ + + L AV+
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M+A+G +P+ +T +VL ACA +G L G ++H A+RTG + ++N L DMY+K
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAK 358
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSI 505
C C++ A VF +I ++ +S+ +I+G E+L F +M + +K + V+ + +
Sbjct: 359 CGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGV 417
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
+SACA + AL GKE+H A+R + F+ NALLD Y++CGR+ A F RD
Sbjct: 418 ISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT 477
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
++WN ++ GY G+ +A F M
Sbjct: 478 ASWNSMILGYGMLGELTIAINLFEAM 503
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 261/516 (50%), Gaps = 11/516 (2%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
++V+++ +C G +H V KT V +GNA + ++ K G + + VF ++
Sbjct: 111 SIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEI 170
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
+R+ SWN +I A +AL ++ R+ GGVKP+ TF +L + G
Sbjct: 171 SERNGVSWNAIITSLAYLERNQDALEMF-RLMIDGGVKPNSVTFSSMLPVLVELKLFDFG 229
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
KE+H +RFG E+D+ V NALI MY K G ++A VF+ + +++ +SWNAM++ + +N
Sbjct: 230 KEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQN 289
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L M+ P+ +T ++V+ A +G + G+E+H I+ G S D+ V
Sbjct: 290 RLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVS 349
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L MY G +VF ++ +D VS+ +I Y + +++ + M +G
Sbjct: 350 NALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMK 408
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D ++ V+SACA L L G ++H LA+R L +++ IAN L+D Y KC ID A +V
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F QIP ++ SW S+ILG + A+ F M + ++ +SV+ +++LSAC+ G +
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLV 528
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILL-- 571
GK+ H + ++D+ R G ++ A S E D + W LL
Sbjct: 529 EEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGA 588
Query: 572 ---TGYAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
GY E A AE F+ G + L ++
Sbjct: 589 CRIHGYIELAHWA-AEHLFKLKPQHSGYYSVLSNMY 623
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 173/385 (44%), Gaps = 49/385 (12%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDA 97
+K+ +S+Q N N I KN N+ + N A+ + MQ +
Sbjct: 256 AKSGRSLQASNVFN--QIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVT 313
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
N++ C G +H+ +T S + + + NA M+ K G L A VF K+
Sbjct: 314 FTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KIS 372
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD S+N+LI GY++ E+L L+ M + G+K DV ++ V+ C + LK+GK
Sbjct: 373 LRDEVSYNILIIGYSQTTNCSESLRLFLEM-GIKGMKLDVVSYMGVISACANLAALKQGK 431
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EVH +R + + NAL+ Y+KCG + A VF +P RD SWN+MI GY G
Sbjct: 432 EVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLG 491
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
E + LF M+E V+ D ++ +V+SA HG ++
Sbjct: 492 ELTIAINLFEAMKEDGVEYDSVSYIAVLSACS-----------HGGLV------------ 528
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDV----VSWTTMISCYEGSVLPDKAVETYQMMEAE 393
EEG+K F M+ +++ + + M+ + L ++AV+ + + E
Sbjct: 529 ------------EEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIE 576
Query: 394 GSMPDEITIASVLSACACLGNLDLG 418
PD ++L AC G ++L
Sbjct: 577 ---PDANVWGALLGACRIHGYIELA 598
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 7/200 (3%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D+ T VL ACA ++ G ++H + + G S + + NTL+ Y C + VF
Sbjct: 6 DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVF 65
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGAL 515
++ +++V+SW S+I ++ EA+ F +M L +PN V++VS+L CA +
Sbjct: 66 DEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDG 125
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT-- 572
+ G++IH + ++ G+ + NAL+D+Y +CG +K + F+ +ER+ +WN ++T
Sbjct: 126 VTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSL 185
Query: 573 GYAERGQGALAEEFFRKMID 592
Y ER Q AL E FR MID
Sbjct: 186 AYLERNQDAL--EMFRLMID 203
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 307/584 (52%), Gaps = 10/584 (1%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSI-ATKNP-NSRLNELCLNGSLEQALKYLDSMQ 87
F +KPK S++ V++ + SS AT N N+ +N G+ Q L SM
Sbjct: 2 FSYKPKPNLLLSRSGLKRYVVSLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASML 61
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLG 147
+ ++ D +L++ C + GL LH + + L + ++ ++ + KFG
Sbjct: 62 KTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFAD 121
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
A VF M +R++ W +IG Y++ G EA SL+ M G++P T +L
Sbjct: 122 VARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEM-RRQGIQPSSVTMLSLLF-- 178
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
GV +L + +H I +G+ +D+++ N++++MY KC ++ +R +FD M +RD +SWN
Sbjct: 179 -GVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWN 237
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
+++S Y + G + L+L MR +PD T SV+S + G+ KLGR +HG +++
Sbjct: 238 SLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRT 297
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
F D V LI MYL GN + ++F R KDVV WT MIS + DKA+ +
Sbjct: 298 CFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVF 357
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+ M G T+ASV++ACA LG+ +LG +H R L I N+L+ M++KC
Sbjct: 358 RQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKC 417
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSIL 506
+D++ VF ++ +N++SW ++I G N +AL F +M + + P+S+T+VS+L
Sbjct: 418 GHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLL 477
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
CA G L GK IH+ +R G+ + +L+DMY +CG + A FN D+
Sbjct: 478 QGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLV 537
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+W+ ++ GY G+G A F+ K ++S K N + + C
Sbjct: 538 SWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSC 581
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 238/436 (54%), Gaps = 3/436 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ L N+ LSM+ K ++ ++ +F M RDL SWN L+ YA+ G+ E L L + M
Sbjct: 202 INLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTM-R 260
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G +PD TF VL +LK G+ +H ++R ++ D V +LI MY+K G++
Sbjct: 261 IQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNID 320
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+ +D + W AMISG +NG K L +F M + V T++SVI+A
Sbjct: 321 IAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACA 380
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG VHGY+ + D++ N L+ M+ G+ ++ VF +M +++VSW
Sbjct: 381 QLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNA 440
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y + KA+ + M ++ PD ITI S+L CA G L LG +H +R G
Sbjct: 441 MITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG 500
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L I++ +L+DMY KC +D A F+Q+P +++SW++II+G + + AL F+
Sbjct: 501 LRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYS 560
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRC 547
K + + +KPN V +S+LS+C+ G + G I+ R G+A + ++D+ R
Sbjct: 561 KFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRA 620
Query: 548 GRMKPAWNQFNSNERD 563
GR++ A+N + D
Sbjct: 621 GRVEEAYNLYKKKFSD 636
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + +AL + M+ + D +V+L++ C G ++HS V +
Sbjct: 439 NAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIR 498
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + M+ K GDL A F +M DL SW+ +I GY G + AL
Sbjct: 499 NGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRF 558
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
Y + F G+KP+ F VL +C +++G ++ + R FG +++ ++ +
Sbjct: 559 YSK-FLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLL 617
Query: 243 VKCGDLVRA 251
+ G + A
Sbjct: 618 SRAGRVEEA 626
>gi|168032055|ref|XP_001768535.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680248|gb|EDQ66686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 278/492 (56%), Gaps = 8/492 (1%)
Query: 57 SIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
S A + + +LCLNG + +L L ++ I A V L+R C + EG Y
Sbjct: 14 SRAVVGSDDDIRDLCLNGQPKNSLHIL---EQRGIEPSSYAYVCLLRRCTHMKDLAEGKY 70
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ ++K+ + + NA ++M++K G L A VF +M +RD+F++ +++ GYAK G+
Sbjct: 71 VHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDARQVFDRMVERDMFTYTMMLTGYAKLGY 130
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
++A +Y++M V D TF +L C + L++G +VH ++R G D+ + N
Sbjct: 131 PEDAYKMYEQM-QKERVPVDRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGN 189
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI MY KCG+L +A VF M RD ++WN M+ G NG + + F M + P
Sbjct: 190 TLIDMYAKCGNLKQAHRVFKEMDNRDIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQKP 249
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T S+++A + + G +H ++K GF DV V L+ M+ G+ + KVF
Sbjct: 250 DKVTYISILNACTSL---EQGTLLHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALKVF 306
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
++ ++VVSWT++IS Y + P++A+E Y M EG + D+ ++L+ CA LG+++
Sbjct: 307 QKLPQRNVVSWTSVISAYAQAGEPERALECYAKMLNEGMVADKRAYTTILNVCAMLGDIE 366
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H +++G+ + II N LIDMY KC + A +F + ++V+SWT++I G
Sbjct: 367 KGKAVHGHIVQSGIATDIITENGLIDMYVKCGRLKDAYRLFQDMNVRDVVSWTTLIEGWV 426
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ + EAL F M L + PN+VT + +L ACA +G+L+ GK IHA + G+A +
Sbjct: 427 QHRQYQEALDTFNDMQLEGVMPNTVTFLGVLKACAGMGSLVDGKRIHARIVEAGLAENAH 486
Query: 536 LPNALLDMYVRC 547
+ +AL DMY +C
Sbjct: 487 IRHALADMYAKC 498
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 224/401 (55%), Gaps = 5/401 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P Y + C+LR C + DL GK VH H+ + + V+NAL+ MY+KCG LV A
Sbjct: 44 GIEPSSYAYVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDA 103
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD M +RD ++ M++GY + G ++ M++ V D +T +++++ +
Sbjct: 104 RQVFDRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERVPVDRITFTTILNVCSTL 163
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G +VH +++ G D+ + N LI MY GN ++ +VF M+++D+V+W M+
Sbjct: 164 RSLEKGMKVHQDMVRGGIRPDIILGNTLIDMYAKCGNLKQAHRVFKEMDNRDIVTWNIMV 223
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ D+A E ++ M EG PD++T S+L+AC +L+ G LH + M+ G
Sbjct: 224 GGAARNGYFDEAFEFFKAMLDEGQKPDKVTYISILNACT---SLEQGTLLHSVIMKAGFE 280
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L++M+SKC + AL+VF ++P +NV+SWTS+I AL + KM
Sbjct: 281 LDVRVGTALVNMFSKCGSVVDALKVFQKLPQRNVVSWTSVISAYAQAGEPERALECYAKM 340
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + + +IL+ CA +G + GK +H H ++ G+A D N L+DMYV+CGR+
Sbjct: 341 LNEGMVADKRAYTTILNVCAMLGDIEKGKAVHGHIVQSGIATDIITENGLIDMYVKCGRL 400
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
K A+ F N RDV +W L+ G+ + Q A + F M
Sbjct: 401 KDAYRLFQDMNVRDVVSWTTLIEGWVQHRQYQEALDTFNDM 441
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 159/279 (56%), Gaps = 5/279 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ VH ++ K F V N L+ MY+ G+ + +VF RM +D+ ++T M++ Y
Sbjct: 68 GKYVHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDARQVFDRMVERDMFTYTMMLTGYAK 127
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P+ A + Y+ M+ E D IT ++L+ C+ L +L+ G+K+HQ +R G+ II+
Sbjct: 128 LGYPEDAYKMYEQMQKERVPVDRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIIL 187
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
NTLIDMY+KC + +A VF ++ ++++++W ++ G N EA FF+ M+
Sbjct: 188 GNTLIDMYAKCGNLKQAHRVFKEMDNRDIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQ 247
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+ VT +SIL+AC +L G +H+ ++ G D + AL++M+ +CG + A
Sbjct: 248 KPDKVTYISILNACT---SLEQGTLLHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALK 304
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F +R+V +W +++ YA+ G+ A E + KM++
Sbjct: 305 VFQKLPQRNVVSWTSVISAYAQAGEPERALECYAKMLNE 343
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ ++E G P +L C + +L G +H ++ + + N L++MY
Sbjct: 36 SLHILEQRGIEPSSYAYVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNALVNMYM 95
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVS 504
KC + A +VF ++ ++++ ++T ++ G +A + +M P + +T +
Sbjct: 96 KCGSLVDARQVFDRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERVPVDRITFTT 155
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
IL+ C+ + +L G ++H +R G+ D L N L+DMY +CG +K A F + RD
Sbjct: 156 ILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGNTLIDMYAKCGNLKQAHRVFKEMDNRD 215
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ WNI++ G A G A EFF+ M+D
Sbjct: 216 IVTWNIMVGGAARNGYFDEAFEFFKAMLDE 245
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 289/541 (53%), Gaps = 12/541 (2%)
Query: 55 TSSIATKNPNSRLNELCLN-GSLEQALKYLDSMQELNICVD---EDALVNLVRLCEWKRG 110
++SI T P ++ LN G+L A + L + + E A L+ LC +
Sbjct: 2 STSIVTPLPLKSISVNTLNKGTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKA 61
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+G LH+ + K SHLS L L M+ K G L A VF +M +R +F+WN ++G
Sbjct: 62 LPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGA 119
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ +G + EA+ LY+ M V GV D TFP VL+ CG + + + G E+H ++ G+
Sbjct: 120 FVSSGKYLEAIELYKEM-RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGE 178
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
V V NALI MY KCGDL AR++FDG M K D +SWN++IS + G+ ++ L LF
Sbjct: 179 FVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRR 238
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M+EV V + T + + E KLG +HG +K DV V N LI MY G
Sbjct: 239 MQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGR 298
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E+ E+VF+ M +D VSW T++S + L A+ ++ M+ PD++++ ++++A
Sbjct: 299 MEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAA 358
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
GNL G ++H A+R GL S + I NTLIDMY+KC C+ F + +K++ISW
Sbjct: 359 SGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISW 418
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
T+II G N EA+ FRK+ + + + + + S+L AC+ + + +EIH + +
Sbjct: 419 TTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
+A D L NA++++Y G A F S +D+ +W ++T G A E
Sbjct: 479 RDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 587 F 587
F
Sbjct: 538 F 538
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 184/602 (30%), Positives = 299/602 (49%), Gaps = 18/602 (2%)
Query: 1 MTMAFCAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQ---SVQVLNTQNTSS 57
+ + C P Q L + + S + K H K +V+V + +
Sbjct: 51 LLLDLCVAVKALPQGQQL-HARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 58 IATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL 117
I T N + + +G +A++ M+ L + +D ++++ C G +
Sbjct: 110 IFTWN--AMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF-GKMCDR-DLFSWNVLIGGYAKAG 175
H V K V + NA ++M+ K GDLG A +F G M ++ D SWN +I + G
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVIRFGYEADV 232
EALSL++RM VG V + YTF L+ GV D +K G +H ++ + ADV
Sbjct: 228 KCLEALSLFRRMQEVG-VASNTYTFVAALQ---GVEDPSFVKLGMGIHGAALKSNHFADV 283
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY KCG + A VF M RD +SWN ++SG +N Y L F M+
Sbjct: 284 YVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNS 343
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
PD +++ ++I+AS G+ G+EVH Y I+ G ++ + N LI MY +
Sbjct: 344 AQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHM 403
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
F M KD++SWTT+I+ Y + +A+ ++ ++ +G D + I SVL AC+ L
Sbjct: 404 GYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGL 463
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + ++H + L I++ N ++++Y + D A F I K+++SWTS+I
Sbjct: 464 KSRNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMI 522
Query: 473 LGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
N EAL +F+ N++P+S+ ++S LSA A + +L GKEIH +R G
Sbjct: 523 TCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFF 582
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+G + ++L+DMY CG ++ + F+S +RD+ W ++ G G A F+KM
Sbjct: 583 LEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKM 642
Query: 591 ID 592
D
Sbjct: 643 TD 644
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 242/457 (52%), Gaps = 3/457 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G +AL MQE+ + + V ++ E G+ +H K
Sbjct: 217 NSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALK 276
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + NA ++M+ K G + A VF M RD SWN L+ G + + +AL+
Sbjct: 277 SNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNY 336
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M KPD + ++ G +L GKEVH + IR G ++++ + N LI MY
Sbjct: 337 FRDM-QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYA 395
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + F+ M ++D ISW +I+GY +N +++ + LF ++ +D D M + S
Sbjct: 396 KCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGS 455
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + RE+HGYV K +D + + N ++ +Y G+R+ + F + SKD
Sbjct: 456 VLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKD 514
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSWT+MI+C + LP +A+E + ++ PD I I S LSA A L +L G ++H
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G IA++L+DMY+ C ++ + ++FH + +++I WTS+I ++ E
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNE 634
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
A+ F+KM N+ P+ +T +++L AC+ G ++ GK
Sbjct: 635 AIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGK 671
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 205/402 (50%), Gaps = 5/402 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ L N AL Y MQ D+ +++NL+ G +H+ +
Sbjct: 318 NTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIR 377
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++GN + M+ K + H Y F M ++DL SW +I GYA+ EA++L
Sbjct: 378 NGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINL 437
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ V G+ D VLR C G+ +E+H +V + AD+ + NA++ +Y
Sbjct: 438 FRKV-QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYG 495
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ G AR F+ + +D +SW +MI+ NG ++ L LF +++ + PD + + S
Sbjct: 496 EVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIIS 555
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SA+ + K G+E+HG++I+ GF + + + L+ MY G E K+F ++ +D
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRD 615
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++ WT+MI+ ++A+ ++ M E +PD IT ++L AC+ G + G + +
Sbjct: 616 LILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFE 675
Query: 424 LAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ M+ G L + ++D+ S+ +++A + +P K
Sbjct: 676 I-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIK 716
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+++H ++K S + L+ MY G+ ++ KVF M + + +W M+ +
Sbjct: 65 GQQLHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVS 122
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
S +A+E Y+ M G D T SVL AC LG LG ++H +A++ G ++ +
Sbjct: 123 SGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFV 182
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
N LI MY KC + A +F I ++ +SW SII + EAL FR+M +
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEV 242
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ N+ T V+ L + G IH AL+ D ++ NAL+ MY +CGRM+ A
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302
Query: 554 WNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S RD +WN LL+G + A +FR M +S
Sbjct: 303 ERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNS 343
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 280/529 (52%), Gaps = 5/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG QAL Y M+E + D +++ C + G +H +
Sbjct: 90 NSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAME 149
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +F DL +A YVF +M +RD SWN LI GY GF+++AL +
Sbjct: 150 MGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDM 209
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y + F + G+ PD +T VL CG + +K G VH + + G DV + N L++MY
Sbjct: 210 YHK-FRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYF 268
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K L AR VF M +D ++WN MI GY + G + + LF+ M + V PD ++++S
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITS 327
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
I A GD ++G+ VH Y+I GF D CN LI MY G+ ++VF + KD
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+W ++I+ Y S + +E+++MM+ E PD +T +LS + L +++ G +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL-GLRLNNRSF 482
++ G + +II N+L+D+Y+KC +D L+VF + ++ISW ++I + ++ +
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV 506
Query: 483 EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ L P+ T++ IL C+ + GKEIH + + G + + NAL++
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG ++ F E+DV W L++ + G+G A + F+ M
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDM 615
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 279/537 (51%), Gaps = 15/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ C NG E AL + + D + +++ C EG+ +H V+ K
Sbjct: 191 NSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK 250
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +GN LSM+ KF L A VF KM +D +WN +I GYA+ G + ++ L
Sbjct: 251 IGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + G PD+ + +R CG DL+ GK VH ++I G+E D N LI MY
Sbjct: 311 FMDM--IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL+ A+ VFD +D ++WN++I+GY ++G Y +GL F MM+ + PD +T
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVL 427
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S + D GR +H VIK GF ++ + N L+ +Y G ++ KVFS M + D
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHD 487
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++SW T+I+ SV D +QM M EG MPDE T+ +L C+ L G +
Sbjct: 488 IISWNTVIA---SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++G S + I N LI+MYSKC ++ ++VF + +K+V++WT++I +
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN- 538
+AL F+ M L+ + P+SV ++ + AC+ G + G ++ + + +
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR-MKTDYNLEPRMEHY 663
Query: 539 -ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D+ R G + A S + D S W LL+ RG +A+ +K+++
Sbjct: 664 ACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 244/458 (53%), Gaps = 4/458 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAG 175
+HS++ + LSV +S + + D + VF + +++ WN +I G
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F +AL Y M ++PD +TFP V+ +C + DL+ G VH H + G+E+D+ +
Sbjct: 101 LFTQALGYYTEM-REKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NALI MY + DL AR VF+ M RD +SWN++ISGY NG + L ++ R +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+SSV+ A + K G VHG + K+G + DV + N L+ MY F E +V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
FS+M KD V+W TMI Y + +V+ + M +G +PD ++I S + AC G+L
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDL 338
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+G +H+ + +G + N LIDMY+KC + A EVF K+ ++W S+I G
Sbjct: 339 QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGY 398
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ E L F+ M + KP+SVT V +LS +++ + G+ IH ++ G +
Sbjct: 399 TQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+ N+LLD+Y +CG M F+ + D+ +WN ++
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 196/390 (50%), Gaps = 2/390 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKR 261
+L+T + + + VH +I G V LI+ Y + D + + VF + P
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN++I NG + + L + MRE + PD T SVI++ + D +LG VH
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+ ++MGF D+ + N LI MY F + + VF M ++D VSW ++IS Y + +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A++ Y G +PD T++SVL AC L + G+ +H + + G+ +II N L+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVT 501
MY K + + +A VF ++ K+ ++W ++I G R ++ F M+ P+ ++
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLS 324
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
+ S + AC + G L GK +H + + G D N L+DMY +CG + A F++ +
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 562 -RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+D WN L+ GY + G E F+ M
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 288/527 (54%), Gaps = 8/527 (1%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH- 118
TK+ NS ++ L G+ Q L+ SMQ+ + +D +L + C + GL LH
Sbjct: 14 TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
SVV +SH S +G++ +S + KFG + VF M R++ W +IG Y++ G D
Sbjct: 74 SVVVNGLSHDSY-IGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDID 132
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A S++++M G++P T +L G+ L +H +I G+E+D+ + N++
Sbjct: 133 IAFSMFKQM-RESGIQPTSVTLLSLLP---GISKLPLLLCLHCLIILHGFESDLALSNSM 188
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY KCG + AR +F+ + RD +SWN+++S Y + G + L L M+ + PD
Sbjct: 189 VNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDK 248
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T S +SAS + GD +LG+ VHG ++K G + D V + L+ +YL + KVF
Sbjct: 249 QTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKS 308
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
KDVV WT MIS + DKA+ + M P T+AS L+ACA LG D+G
Sbjct: 309 TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +R G++ I N+L+ MY+KC + ++ +F+++ +K+++SW +I+ G N
Sbjct: 369 ASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKN 428
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ + FF +M + L+P+S+T+ S+L AC GAL GK IH LR +
Sbjct: 429 GYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTE 488
Query: 538 NALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALA 583
AL+DMY +CG ++ A F+ +RD+ AW+ L+ GY G+G +A
Sbjct: 489 TALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 238/477 (49%), Gaps = 9/477 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ ++M+ K G + A +F + RD+ SWN L+ Y+K G +E L L Q M +
Sbjct: 184 LSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAM-KIE 242
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+KPD TF L DL+ GK VH +++ G D V +AL+ +Y++C L A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF ++D + W AMISG +N K L +F M E V P TL+S ++A +
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +G +HGYV++ G D+ N L+ MY ++ +F++M KD+VSW ++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + + K + + M PD IT+ S+L AC G L G +H +R+ LI
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I+ L+DMY KC ++ A + F + +++++W+++I+G N + AL + +
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-LLDMYVRCGR 549
+ ++PN V +S+LSAC+ G + G I+ + A ++D+ R G+
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGK 602
Query: 550 MKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK----GNWRKL 600
+ A++ + E + +LL G+ L + R M + K GN+ +L
Sbjct: 603 VDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQL 659
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L + + + + M++ + D + +L++ C +G ++H+ V ++ +
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMT 487
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G+L +A F M RDL +W+ LI GY G + AL Y F G
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSE-FLGTG 546
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
++P+ F VL C + +G ++
Sbjct: 547 MEPNHVIFISVLSACSHGGLISKGLSIY 574
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/529 (32%), Positives = 280/529 (52%), Gaps = 5/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG QAL Y M+E + D +++ C + G +H +
Sbjct: 90 NSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAME 149
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +F DL +A YVF +M +RD SWN LI GY GF+++AL +
Sbjct: 150 MGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDM 209
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y + F + G+ PD +T VL CG + +K G VH + + G DV + N L++MY
Sbjct: 210 YHK-FRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYF 268
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K L AR VF M +D ++WN MI GY + G + + LF+ M + V PD ++++S
Sbjct: 269 KFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITS 327
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
I A GD ++G+ VH Y+I GF D CN LI MY G+ ++VF + KD
Sbjct: 328 TIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+W ++I+ Y S + +E+++MM+ E PD +T +LS + L +++ G +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADINQGRGIHC 446
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL-GLRLNNRSF 482
++ G + +II N+L+D+Y+KC +D L+VF + ++ISW ++I + ++ +
Sbjct: 447 DVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV 506
Query: 483 EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ L P+ T++ IL C+ + GKEIH + + G + + NAL++
Sbjct: 507 GFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIE 566
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG ++ F E+DV W L++ + G+G A + F+ M
Sbjct: 567 MYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDM 615
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 279/537 (51%), Gaps = 15/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ C NG E AL + + D + +++ C EG+ +H V+ K
Sbjct: 191 NSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK 250
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +GN LSM+ KF L A VF KM +D +WN +I GYA+ G + ++ L
Sbjct: 251 IGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + G PD+ + +R CG DL+ GK VH ++I G+E D N LI MY
Sbjct: 311 FMDM--IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL+ A+ VFD +D ++WN++I+GY ++G Y +GL F MM+ + PD +T
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVL 427
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S + D GR +H VIK GF ++ + N L+ +Y G ++ KVFS M + D
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHD 487
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++SW T+I+ SV D +QM M EG MPDE T+ +L C+ L G +
Sbjct: 488 IISWNTVIA---SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE 544
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++G S + I N LI+MYSKC ++ ++VF + +K+V++WT++I +
Sbjct: 545 IHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGE 604
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN- 538
+AL F+ M L+ + P+SV ++ + AC+ G + G ++ + + +
Sbjct: 605 GKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR-MKTDYNLEPRMEHY 663
Query: 539 -ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D+ R G + A S + D S W LL+ RG +A+ +K+++
Sbjct: 664 ACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 244/458 (53%), Gaps = 4/458 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAG 175
+HS++ + LSV +S + + D + VF + +++ WN +I G
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F +AL Y M ++PD +TFP V+ +C + DL+ G VH H + G+E+D+ +
Sbjct: 101 LFTQALGYYTEM-REKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NALI MY + DL AR VF+ M RD +SWN++ISGY NG + L ++ R +
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T+SSV+ A + K G VHG + K+G + DV + N L+ MY F E +V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
FS+M KD V+W TMI Y + +V+ + M +G +PD ++I S + AC G+L
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDL 338
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+G +H+ + +G + N LIDMY+KC + A EVF K+ ++W S+I G
Sbjct: 339 QVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGY 398
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ E L F+ M + KP+SVT V +LS +++ + G+ IH ++ G +
Sbjct: 399 TQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+ N+LLD+Y +CG M F+ + D+ +WN ++
Sbjct: 459 IGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 196/390 (50%), Gaps = 2/390 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKR 261
+L+T + + + VH +I G V LI+ Y + D + + VF + P
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN++I NG + + L + MRE + PD T SVI++ + D +LG VH
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+ ++MGF D+ + N LI MY F + + VF M ++D VSW ++IS Y + +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A++ Y G +PD T++SVL AC L + G+ +H + + G+ +II N L+
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLL 264
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVT 501
MY K + + +A VF ++ K+ ++W ++I G R ++ F M+ P+ ++
Sbjct: 265 SMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLS 324
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
+ S + AC + G L GK +H + + G D N L+DMY +CG + A F++ +
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 562 -RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+D WN L+ GY + G E F+ M
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 277/520 (53%), Gaps = 5/520 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L++L++ C + +G +H + ++ L + ++++ A V
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 153 FGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F + + D+ WN L+ K F E L ++ R+ +KPD +T+P VL+ C G+
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ GK VH HVI+ G+ DV V+++ + MY KC A +FD MP+RD SWN +IS
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y+++G+ K L LF M+ PD +TL++VIS+ + D + G+E+H +++ GF+
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D V + L+ MY G E ++VF +++ K+VVSW +MI+ Y +E ++ M+
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 300
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG P T++S+L AC+ NL LG +H +R + + I + ++LID+Y KC I
Sbjct: 301 EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACA 510
A VF +P NV+SW +I G EAL+ F M +KP+++T S+L AC+
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++ L GKEIH + + + + ALLDMY +CG + A + FN ERD +W
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTS 480
Query: 570 LLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
++ Y GQ A + F KM D+K + + + C
Sbjct: 481 MIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 520
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 269/494 (54%), Gaps = 20/494 (4%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
GY G +H+ V K+ + V + ++ + M+ K A +F +M +RD+ SWN +I
Sbjct: 123 GY--GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y + G ++AL L++ M V G KPD T V+ +C + DL+RGKE+H+ ++R G+
Sbjct: 181 CYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D V +AL+ MY KCG L A+ VF+ + +++ +SWN+MI+GY G+ + LF M
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E + P TLSS++ A + +LG+ +HGY+I+ D+ V + LI +Y GN
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYE--GSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
E VF M +VVSW MIS Y GS L +A+ + M G PD IT SVL
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYL--EALVIFTDMRKAGVKPDAITFTSVLP 417
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ L L+ G ++H + + L ++ L+DMY+KC +D+AL +F+Q+P+++ +S
Sbjct: 418 ACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS 477
Query: 468 WTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
WTS+I + ++FEAL F KM + KP+ VT ++ILSAC+ G + G +
Sbjct: 478 WTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG----CYYF 533
Query: 527 RIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERG 578
+A GF P + L+D+ R GR++ A+ DV + L +
Sbjct: 534 NQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHK 593
Query: 579 QGALAEEFFRKMID 592
+ L E+ R +I+
Sbjct: 594 KLDLGEQIGRLLIE 607
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 209/391 (53%), Gaps = 2/391 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL+ + M+ D L ++ C + G +H + ++ L +
Sbjct: 185 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV 244
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G L A VF ++ +++ SWN +I GY+ G + L++RM G
Sbjct: 245 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDE-EG 303
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++P + T +L C +L+ GK +H ++IR EAD+ V ++LI +Y KCG++ A
Sbjct: 304 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MPK + +SWN MISGY + G Y++ L++F MR+ V PD +T +SV+ A +
Sbjct: 364 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 423
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+E+H ++I+ + V L+ MY G +E +F+++ +D VSWT+MI+
Sbjct: 424 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 483
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMRTGLI 431
Y +A++ ++ M+ + PD++T ++LSAC+ G +D G +Q+ G
Sbjct: 484 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 543
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+ + LID+ + + +A E+ + PD
Sbjct: 544 PAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 4/312 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L G + ++ M E I L +++ C G ++H + +
Sbjct: 277 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 336
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + ++ + ++ K G++G A VF M ++ SWNV+I GY K G + EAL +
Sbjct: 337 NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVI 396
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GVKPD TF VL C + L++GKE+H +I E + V+ AL+ MY
Sbjct: 397 FTDM-RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 455
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A +F+ +P+RD +SW +MI+ Y +G+ + L LF M++ PD +T +
Sbjct: 456 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515
Query: 304 VISASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
++SA G G +I + GF V + LI + G E ++ R
Sbjct: 516 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 575
Query: 362 -KDVVSWTTMIS 372
+DV +T+ S
Sbjct: 576 REDVGLLSTLFS 587
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 287/527 (54%), Gaps = 8/527 (1%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH- 118
TK+ NS ++ L G+ Q L+ SMQ+ + +D +L + C + GL LH
Sbjct: 14 TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
SVV +SH S +G++ +S + KFG + VF M R++ W +IG Y++ G D
Sbjct: 74 SVVVNGLSHDSY-IGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDID 132
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A S++++M G++P T +L G+ L +H +I G+E+D+ + N++
Sbjct: 133 IAFSMFKQM-RESGIQPTSVTLLSLLP---GISKLPLLLCLHCLIILHGFESDLALSNSM 188
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY KCG + AR +F + RD +SWN+++S Y + G + L L M+ + PD
Sbjct: 189 VNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDK 248
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T S +SAS + GD +LG+ VHG ++K G + D V + L+ +YL + KVF
Sbjct: 249 QTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKS 308
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
KDVV WT MIS + DKA+ + M P T+AS L+ACA LG D+G
Sbjct: 309 TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIG 368
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +R G++ I N+L+ MY+KC + ++ +F+++ +K+++SW +I+ G N
Sbjct: 369 ASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKN 428
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ + FF +M + L+P+S+T+ S+L AC GAL GK IH LR +
Sbjct: 429 GYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTE 488
Query: 538 NALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALA 583
AL+DMY +CG ++ A F+ +RD+ AW+ L+ GY G+G +A
Sbjct: 489 TALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 238/477 (49%), Gaps = 9/477 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ ++M+ K G + A +F + RD+ SWN L+ Y+K G +E L L Q M +
Sbjct: 184 LSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAM-KIE 242
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+KPD TF L DL+ GK VH +++ G D V +AL+ +Y++C L A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF ++D + W AMISG +N K L +F M E V P TL+S ++A +
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +G +HGYV++ G D+ N L+ MY ++ +F++M KD+VSW ++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + + K + + M PD IT+ S+L AC G L G +H +R+ LI
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I+ L+DMY KC ++ A + F + +++++W+++I+G N + AL + +
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-LLDMYVRCGR 549
+ ++PN V +S+LSAC+ G + G I+ + A ++D+ R G+
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGK 602
Query: 550 MKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK----GNWRKL 600
+ A++ + E + +LL G+ L + R M + K GN+ +L
Sbjct: 603 VDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQL 659
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L + + + + M++ + D + +L++ C +G ++H+ V ++ +
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMT 487
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G+L +A F M RDL +W+ LI GY G + AL Y F G
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSE-FLGTG 546
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
++P+ F VL C + +G ++
Sbjct: 547 MEPNHVIFISVLSACSHGGLISKGLSIY 574
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 277/528 (52%), Gaps = 11/528 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL+ M+ L + D L++ C G +H + K V +
Sbjct: 36 NGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFV 95
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N+ ++++ K D+ A +F +M R D+ SWN +I Y+ G EAL L+ M
Sbjct: 96 VNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEML-KA 154
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV + YTF L+ C +K G ++H +++ G DV V NAL+ MYV+ G + A
Sbjct: 155 GVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEA 214
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++F + +D ++WN+M++G+ +NG Y + L F ++ + PD +++ S+I AS +
Sbjct: 215 AVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRL 274
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G G+E+H Y IK GF ++ V N LI MY G + F M KD++SWTT
Sbjct: 275 GYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAA 334
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA---CLGNLDLGIKLHQLAMRT 428
+ Y + +A+E + ++ EG D I S+L AC CLG + ++H +R
Sbjct: 335 AGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIK---EIHGYTIRG 391
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL S ++ NT+ID+Y +C ID A+ +F I K+V+SWTS+I N + +AL F
Sbjct: 392 GL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M L+P+ VTLVSILSA + L GKEIH +R G +G + N L+DMY RC
Sbjct: 451 SSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARC 510
Query: 548 GRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
G ++ A+ F + R++ W +++ Y G G A E F +M D K
Sbjct: 511 GSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEK 558
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 255/458 (55%), Gaps = 5/458 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A +F KM +R +F+WN ++GGY G AL +Y+ M + GV D Y
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHL-GVSFDSY 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TFP +L+ CG V DL G E+H I++G ++ V VVN+L+ +Y KC D+ AR +FD M
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 259 PKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
R D +SWN++IS Y NG + L LF M + V + T ++ + A E KLG
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H ++K G DV V N L+ MY+ FG E +F +E KD+V+W +M++ + +
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L +A+E + ++ PD+++I S++ A LG L G ++H A++ G S I++
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
NTLIDMY+KC C+ F + K++ISWT+ G N +AL R++ M +
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
++ + SIL AC + L KEIH + +R G++ D L N ++D+Y CG + A
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRI 418
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S E +DV +W +++ Y G A E F M ++
Sbjct: 419 FESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKET 456
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 285/553 (51%), Gaps = 18/553 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL M + + + ++ CE G+ +H+ + K
Sbjct: 129 NSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILK 188
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L V + NA ++M+V+FG + A +FG + +D+ +WN ++ G+ + G + EAL
Sbjct: 189 SGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEF 248
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + +KPD + ++ G + L GKE+H + I+ G+++++ V N LI MY
Sbjct: 249 FYDL-QNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYA 307
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + FD M +D ISW +GY +N Y++ L L ++ +D D + S
Sbjct: 308 KCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGS 367
Query: 304 VISASELVGDEKLGR--EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ A G LG+ E+HGY I+ G SD V + N +I +Y G + ++F +E
Sbjct: 368 ILLACR--GLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIEC 424
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KDVVSWT+MISCY + L +KA+E + M+ G PD +T+ S+LSA L L G ++
Sbjct: 425 KDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI 484
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R G I I+NTL+DMY++C ++ A ++F ++N+I WT++I ++
Sbjct: 485 HGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYG 544
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLP 537
A+ F +M + P+ +T +++L AC+ G + GK EI ++ + +
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHY-- 602
Query: 538 NALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTG---YAERGQGALAEEFFRKM-I 591
L+D+ R ++ A+ S NE W LL ++ + G +A E ++ +
Sbjct: 603 TCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDL 662
Query: 592 DSKGNWRKLMGLF 604
D+ GN+ + +F
Sbjct: 663 DNPGNYVLVSNVF 675
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 278/520 (53%), Gaps = 10/520 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+ +L M+E + + + L+ C + +G LH + K V L +
Sbjct: 52 GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+++ FGDL A VF +M R L WN ++ + L L++RM VKPD
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQ-EKVKPDER 170
Query: 199 TFPCVLRTCGG--VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T+ VLR CGG VP +++H I GYE + V N LI +Y K G L A+ VFD
Sbjct: 171 TYAGVLRGCGGGDVP-FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFD 229
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
G+ KRD +SW AM+SG ++G + ++LF M V P SSV+SA V K+
Sbjct: 230 GLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKV 289
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++HG V+K GFS + VCN L+ +Y GN E+VF+ M +D VS+ ++IS
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
DKA+E ++ M + PD +T+AS+LSAC+ +G L +G + H A++ G+ S II+
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIIL 409
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL--GLRLN-NRSFEALIFFRKMML 493
L+D+Y KC I A E F +NV+ W +++ GL N N SF+ IF + M
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK--IFTQMQME 467
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++PN T SIL C+ + A+ G++IH L+ G F+ ++ + L+DMY + G++ A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
F E+DV +W ++ GYA+ + A A F++M D
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQD 567
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 261/526 (49%), Gaps = 3/526 (0%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L+ L +G E+A+ M + +++ C Y G LH +V K
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF 302
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
L + NA ++++ + G+ A VF M RD S+N LI G ++ G+ D+AL L+++
Sbjct: 303 SLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKK 362
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M + +KPD T +L C V L GK+ H + I+ G +D+ + AL+ +YVKC
Sbjct: 363 M-CLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS 421
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ A F + + WN M+ Y + +F M+ ++P+ T S++
Sbjct: 422 DIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILR 481
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ LG ++H V+K GF +V V + LI MY G + K+F R++ KDVVS
Sbjct: 482 TCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS 541
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT MI+ Y +A+ ++ M+ +G D I AS +SACA + L+ G ++H A
Sbjct: 542 WTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQAC 601
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+G + + N L+ +Y++C + A F +I K+ ISW S+I G + EAL
Sbjct: 602 VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALS 661
Query: 487 FFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F +M + NS T +SA A + + GK+IHA ++ G + + N L+ +Y
Sbjct: 662 LFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYA 721
Query: 546 RCGRMKPAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A Q F E++ +WN +LTGY++ G G A F M
Sbjct: 722 KCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDM 767
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 236/451 (52%), Gaps = 2/451 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G ++AL+ M + D + +L+ C G HS K
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L A L ++VK D+ A F ++ WNV++ Y +E+ +
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKI 460
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + G++P+ +T+P +LRTC + + G+++H V++ G++ +V V + LI MY
Sbjct: 461 FTQM-QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 519
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A +F + ++D +SW AMI+GY ++ ++ + L LF M++ + D + +S
Sbjct: 520 KLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFAS 579
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + G+++H G+SDD+SV N L+ +Y G + F ++ SKD
Sbjct: 580 AISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD 639
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW ++IS + S ++A+ + M G + T +SA A + N+ LG ++H
Sbjct: 640 NISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHA 699
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++TG S ++N LI +Y+KC ID A F ++P+KN ISW +++ G + F+
Sbjct: 700 MIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFK 759
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
AL F M L + PN VT V +LSAC+ +G
Sbjct: 760 ALSLFEDMKQLGVLPNHVTFVGVLSACSHVG 790
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 5/446 (1%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L ++ K MQ I ++ +++R C R D G +H+ V KT +V + +
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ K G L HA +F ++ ++D+ SW +I GYA+ F EAL+L++ M G+
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM-QDQGIH 571
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D F + C G+ L +G+++H GY D+ V NAL+++Y +CG + A
Sbjct: 572 SDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFA 631
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + +D ISWN++ISG+ ++G + L LF M + + + T +SA+ V +
Sbjct: 632 FDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANV 691
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
KLG+++H +IK G + V N LI +Y GN ++ E+ F M K+ +SW M++ Y
Sbjct: 692 KLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGY 751
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--GLIS 432
KA+ ++ M+ G +P+ +T VLSAC+ +G +D GIK Q +MR GL+
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQ-SMREVHGLVP 810
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++D+ + + +A ++P + +L + +++ + F +
Sbjct: 811 KPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHL 870
Query: 493 LNLKP-NSVTLVSILSACARIGALMC 517
L L+P +S T V + + A G C
Sbjct: 871 LELEPKDSATYVLLSNMYAVTGKWGC 896
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ NS T + +L C G G ++H L++G + L L+D+Y+ G + A
Sbjct: 64 VRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAV 123
Query: 555 NQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ R +S WN +L + FR+M+ K + R G+ R C
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC 179
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 287/542 (52%), Gaps = 4/542 (0%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
QN + N R + + NG+ + Y + M + +D+ +++LC
Sbjct: 118 QNCRTAFLWNTLIRAHSIAWNGTFDGFETY-NRMVRRGVQLDDHTFPFVLKLCSDSFDIC 176
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G+ +H VV K V +GN L ++ G L A +F +M +RD+ SWN +IG +
Sbjct: 177 KGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLS 236
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G + EA + Y M +KP++ + +L + D + + +H + ++ G ++ V
Sbjct: 237 VNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQV 296
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
NAL+ Y KCG + VF+ +++ +SWN++I+G G L F MM +
Sbjct: 297 TTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDA 356
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P+ +T+SS++ + K G+E+HG+ ++MG D+ + N LI MY G+ E
Sbjct: 357 GAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEA 416
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+F ++ +++VSW MI+ Y + LP +A+ M+ G P+ +T +VL ACA L
Sbjct: 417 STIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARL 476
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
G L G ++H + +R GL S + ++N+LIDMY+KC C+ A VF+ K+ +S+ +I
Sbjct: 477 GFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILI 535
Query: 473 LGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
+G + ++L F +M +L KP+ V+ V ++SACA + AL GKE+H ALR +
Sbjct: 536 IGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLY 595
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ N+LLD Y +CGR+ A FN +DV++WN ++ GY G+ A F M
Sbjct: 596 SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAM 655
Query: 591 ID 592
D
Sbjct: 656 RD 657
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 145/286 (50%), Gaps = 13/286 (4%)
Query: 318 REVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTTMISCY 374
++VH I GF VS+C LI Y F + +F++ + W T+I +
Sbjct: 74 KQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAH 133
Query: 375 E----GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
G+ ETY M G D+ T VL C+ ++ G+++H + + G
Sbjct: 134 SIAWNGTF---DGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGF 190
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + + NTL+ +Y C ++ A +F ++P+++V+SW +II L +N EA ++
Sbjct: 191 DTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFW 250
Query: 491 MMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M+L +KPN V+++S+L A + + IH +++++G+ NAL+D Y +CG
Sbjct: 251 MILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCG 310
Query: 549 RMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+K W FN E++ +WN ++ G A +G+ A FR MID+
Sbjct: 311 SVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDA 356
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 191/421 (45%), Gaps = 47/421 (11%)
Query: 35 KTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVD 94
K+ H S++ + L+ +N S N LN L L +A++++ MQE C +
Sbjct: 409 KSGH-STEASTIFHNLDRRNIVSWNAMIANYALNRLPL-----EAIRFVIQMQETGECPN 462
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
N++ C G +H++ + + + N+ + M+ K G L A VF
Sbjct: 463 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 522
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+D S+N+LI GY++ ++L+L+ M +G KPDV +F V+ C + LK
Sbjct: 523 T-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-KPDVVSFVGVISACANLAALK 580
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+GKEVH +R + + V N+L+ Y KCG + A +F+ + +D SWN MI GY
Sbjct: 581 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 640
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
GE + +F MR+ V D ++ +V+SA HG +++ G+
Sbjct: 641 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACS-----------HGGLVERGWQ---- 685
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
Y S E + R+E + + +T M+ + ++A + Q +
Sbjct: 686 --------YFS-------EMLAQRLEPTE-MHYTCMVDLLGRAGFVEEAAKLIQQLPIA- 728
Query: 395 SMPDEITIASVLSACACLGNLDLGIKL--HQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD ++L AC GN++LG + H ++ Y I+ L ++Y++ D+
Sbjct: 729 --PDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYIL---LSNIYAETGRWDE 783
Query: 453 A 453
A
Sbjct: 784 A 784
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 260/465 (55%), Gaps = 5/465 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F ++G + A VF + + + ++ G+AK D+AL + RM V+P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRM-RDDEVEP 133
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG +L+ GKE+H +++ G+ D+ + L MY KC + AR VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD +SWN +++GY +NG L + +M E + P F+T+ SV+ A + +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+E+HGY ++ GF V++ L+ MY G+ + +F M ++VVSW +MI Y
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P +A+ +Q M EG P ++++ L ACA LG+L+ G +H+L++ L +
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ N+LI MY KCK +D A +F ++ + ++SW ++ILG N R EAL +F +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP++ T VS+++A A + K IH +R + + F+ AL+DMY +CG + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
F+ +ER V+ WN ++ GY G G A E F +M KG R
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEM--QKGTIR 536
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 250/483 (51%), Gaps = 5/483 (1%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++ALK+ M++ + L+++C + G +H ++ K+ L +
Sbjct: 116 LDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+M+ K + A VF +M +RDL SWN ++ GY++ G AL + M +KP
Sbjct: 176 LENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLM-CEENLKP 234
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
T VL + ++ GKE+H + +R G+++ V++ AL+ MY KCG L ARL+F
Sbjct: 235 SFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLF 294
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
DGM +R+ +SWN+MI Y +N + +++F M + V P +++ + A +GD +
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR +H +++ +VSV N LI MY + +F +++S+ +VSW MI +
Sbjct: 355 RGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFA 414
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P +A+ + M+A PD T SV++A A L +H + MR L +
Sbjct: 415 QNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVF 474
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ L+DMY+KC I A +F + +++V +W ++I G + AL F +M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGT 534
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKP 552
++PN VT +S++SAC+ G + G + H ++ + + + + A++D+ R GR+
Sbjct: 535 IRPNGVTFLSVISACSHSGLVEAGLKCF-HMMKENYSIEPSMDHYGAMVDLLGRAGRLNE 593
Query: 553 AWN 555
AW+
Sbjct: 594 AWD 596
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 213/405 (52%), Gaps = 13/405 (3%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ +VY P +L C + +L+ + + + G + L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDE 87
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ + K+ + + M+ G+ + + K L F+ MR+ V+P + ++ ++
Sbjct: 88 AARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLL---KV 144
Query: 311 VGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
GDE ++G+E+HG ++K GFS D+ L MY E KVF RM +D+VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSW 204
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+++ Y + + A+E +M E P ITI SVL A + L + +G ++H AMR
Sbjct: 205 NTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMR 264
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G S + IA L+DMY+KC + A +F + ++NV+SW S+I N EA++
Sbjct: 265 AGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVI 324
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM+ +KP V+++ L ACA +G L G+ IH ++ + + + + N+L+ MY +
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCK 384
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
C + A + F R + +WN ++ G+A+ G+ A +F +M
Sbjct: 385 CKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQM 429
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 192/403 (47%), Gaps = 2/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL+ ++ M E N+ +V+++ R G +H + V +
Sbjct: 214 NGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI 273
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G L A +F M +R++ SWN +I Y + EA+ ++Q+M G
Sbjct: 274 ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML-DEG 332
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + L C + DL+RG+ +H + + +V VVN+LI+MY KC ++ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + R +SWNAMI G+ +NG ++ L F M+ V PD T SVI+A +
Sbjct: 393 SMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELS 452
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG V++ +V V L+ MY G +F M + V +W MI
Sbjct: 453 ITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y + A+E ++ M+ P+ +T SV+SAC+ G ++ G+K H + +
Sbjct: 513 GYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIE 572
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ ++D+ + +++A + Q+P K ++ +LG
Sbjct: 573 PSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 8/296 (2%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R + + K G + L+ ++ +G+ +E +VF ++ K V + TM+ +
Sbjct: 54 RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKV 113
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA++ + M + P +L C L +G ++H L +++G +
Sbjct: 114 SDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
L +MY+KC+ + +A +VF ++P+++++SW +I+ G N + AL M NLK
Sbjct: 174 TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLK 233
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPAW 554
P+ +T+VS+L A + + + GKEIH +A+R G FD + AL+DMY +CG +K A
Sbjct: 234 PSFITIVSVLPAVSALRLIRIGKEIHGYAMRAG--FDSLVNIATALVDMYAKCGSLKTAR 291
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ER+V +WN ++ Y + A F+KM+D K +MG C
Sbjct: 292 LLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHAC 347
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N + ++A+ M + + + +++ + C + G ++H + +
Sbjct: 306 NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + N+ +SM+ K ++ A +FGK+ R + SWN +I G+A+ G EAL+
Sbjct: 366 LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNY 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M VKPD +T+ V+ + K +H V+R + +V V AL+ MY
Sbjct: 426 FSQM-QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG ++ ARL+FD M +R +WNAMI GY +G L LF M++ + P+ +T S
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLS 544
Query: 304 VISASELVG 312
VISA G
Sbjct: 545 VISACSHSG 553
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E A +L C+ L L + L + GL + L+ ++ + +D+A VF
Sbjct: 37 EHPAALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFE 93
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
I K + + +++ G + +AL FF +M + ++P +L C L
Sbjct: 94 PIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRV 153
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GKEIH ++ G + D F L +MY +C ++ A F+ ERD+ +WN ++ GY++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 577 RGQGALAEEFFRKMID 592
G +A E M +
Sbjct: 214 NGMARMALEMVNLMCE 229
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 300/582 (51%), Gaps = 14/582 (2%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
F +KPK K V + + T+S+ N+ +N G+ Q L SM +
Sbjct: 2 FSYKPKQSPSGLKRC-VVSLPHPATTNSV-----NATINHHSTQGAHHQVLATYASMLKT 55
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
++ D +L++ C + + GL LH + + L + ++ ++ + KFG A
Sbjct: 56 HVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVA 115
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
VF M +R++ W +IG Y++ G EA SL+ M G++P T VL G
Sbjct: 116 RKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEM-RRQGIQPSSVT---VLSLLFG 171
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
V +L + +H I +G+ +D+++ N+++ +Y KCG++ +R +FD M RD +SWN++
Sbjct: 172 VSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSL 231
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
IS Y + G + L+L MR + T SV+S + G+ KLGR +HG +++ GF
Sbjct: 232 ISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGF 291
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D V LI +YL G + ++F R KDVV WT MIS + DKA+ ++
Sbjct: 292 YLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQ 351
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G P T+ASV++ACA LG+ +LG + +R L + N+L+ MY+KC
Sbjct: 352 MLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGH 411
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+D++ VF + ++++SW +++ G N EAL F +M N P+S+T+VS+L
Sbjct: 412 LDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQG 471
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
CA G L GK IH+ +R G+ + +L+DMY +CG + A FN D+ +W
Sbjct: 472 CASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSW 531
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ ++ GY G+G A F+ K ++S K N + + C
Sbjct: 532 SAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSC 573
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 235/436 (53%), Gaps = 3/436 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ L N+ L+++ K G++ ++ +F M RDL SWN LI YA+ G E L L + M
Sbjct: 194 INLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTM-R 252
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G + TF VL +LK G+ +H ++R G+ D V +LI +Y+K G +
Sbjct: 253 LQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKID 312
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+ +D + W AMISG +NG K L +F M + V P T++SVI+A
Sbjct: 313 IAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACA 372
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG + GY+++ DV+ N L+ MY G+ ++ VF M +D+VSW
Sbjct: 373 QLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNA 432
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y + +A+ + M ++ PD ITI S+L CA G L LG +H +R G
Sbjct: 433 MVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG 492
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L I++ +L+DMY KC +D A F+Q+P +++SW++II+G + + AL F+
Sbjct: 493 LRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYS 552
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRC 547
K + + +KPN V +S+LS+C+ G + G I+ + G+A D ++D+ R
Sbjct: 553 KFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRA 612
Query: 548 GRMKPAWNQFNSNERD 563
GR++ A+N + D
Sbjct: 613 GRVEEAYNVYKKKFPD 628
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + +AL + M+ N D +V+L++ C G ++HS V +
Sbjct: 431 NAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIR 490
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + M+ K GDL A F +M DL SW+ +I GY G + AL
Sbjct: 491 NGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRF 550
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
Y + F G+KP+ F VL +C +++G ++ + + FG D++ ++ +
Sbjct: 551 YSK-FLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLL 609
Query: 243 VKCGDLVRARLVF 255
+ G + A V+
Sbjct: 610 SRAGRVEEAYNVY 622
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 276/507 (54%), Gaps = 9/507 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +A+K S + I D+ + + + C R + H ++ V +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNAF+ + K + A VF + RD+ +WN L Y GF + L+++++M +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM-GLNK 136
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VK + T +L C + DLK GKE+H V+R G DV V +A + Y KC + A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASE 309
VFD MP RD ++WN++ S Y G KGL +F RE+++D PD +T+S ++SA
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVF---REMVLDGVKPDPVTVSCILSACS 253
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ D K G+ +HG+ +K G ++V V N L+ +Y S E + VF M ++V++W +
Sbjct: 254 DLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNS 313
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+ SCY P K + ++ M G PD + ++S+L AC+ L +L G +H A++ G
Sbjct: 314 LASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
++ + + L+++Y+ C C+ +A VF +P +NV++W S+ + L FR
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M+LN +KP+ VT++SIL AC+ + L GK IH A+R G+ D F+ NALL +Y +C
Sbjct: 434 EMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCV 493
Query: 549 RMKPAWNQFN-SNERDVSAWNILLTGY 574
++ A F+ R+V++WN +LT Y
Sbjct: 494 CVREAQVVFDLIPHREVASWNGILTAY 520
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 260/515 (50%), Gaps = 38/515 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V + V + +AF++ + K + A VF M RD+ +WN L Y
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
GF + L++++ M + GVKPD T C+L C + DLK GK +H ++ G +V
Sbjct: 220 CGFPQKGLNVFREMV-LDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ +Y C + A+ VFD MP R+ I+WN++ S Y G KGL +F M
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD M +SS++ A + D K G+ +HG+ +K G +DV VC L+ +Y + E +
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF M ++VV+W ++ SCY P K + ++ M G PD +T+ S+L AC+ L
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV-------- 465
+L G +H A+R G++ + + N L+ +Y+KC C+ +A VF IP + V
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518
Query: 466 ---------------------------ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
I+W+ +I G N+R EA+ FRKM + KP
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKP 578
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T+ SIL AC+ L GKEIH + R +D NAL+DMY +CG + + N F
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVF 638
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +DV +WN ++ G G A F KM+
Sbjct: 639 DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKML 673
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 222/419 (52%), Gaps = 3/419 (0%)
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G +EA+ +Y G+KPD F V + C D + K+ H R G +DV +
Sbjct: 19 GLPNEAIKIYTSS-RARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NA I Y KC + AR VFD + RD ++WN++ + Y G +GL +F M V
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ +T+SS++ + D K G+E+HG+V++ G +DV V + + Y E +
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M +DVV+W ++ SCY P K + ++ M +G PD +T++ +LSAC+ L +
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G +H A++ G++ + ++N L+++Y C C+ +A VF +P +NVI+W S+
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ L FR+M LN +KP+ + + SIL AC+++ L GK IH A++ G+ D
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED 377
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ AL+++Y C ++ A F+ R+V WN L + Y G FR+M+
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 257/538 (47%), Gaps = 44/538 (8%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++ C + G +H K +V + NA ++++ + A VF M R+
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ +WN L Y GF + L++++ M + GVKPD +L C + DLK GK +H
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREM-GLNGVKPDPMAMSSILPACSQLKDLKSGKTIH 366
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G DV V AL+ +Y C + A+ VFD MP R+ ++WN++ S Y G
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQ 426
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
KGL +F M V PD +T+ S++ A + D K G+ +HG+ ++ G +DV VCN L+
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALL 486
Query: 341 KMYLS-----------------------------FGNRE--EGEKVFSRMESKDV----V 365
+Y F N+E +G +FS+M +V +
Sbjct: 487 SLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEI 546
Query: 366 SWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+W+ +I C + S + ++A+E ++ M+ G PDE TI S+L AC+ L +G ++H
Sbjct: 547 TWSVVIGGCVKNSRI-EEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
R + N L+DMY+KC + + VF +P K+V SW ++I ++ EA
Sbjct: 606 VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEA 665
Query: 485 LIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLD 542
L F KM+L++ KP+S T +LSAC+ + G +I R V + ++D
Sbjct: 666 LSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVD 725
Query: 543 MYVRCGRMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGN 596
+Y R G ++ A+ Q E AW L G LA+ +K+ ID G+
Sbjct: 726 IYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGS 783
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 144/335 (42%), Gaps = 53/335 (15%)
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM----CDRDLFSWNVLIGGYAKAG 175
VV + H V N L+ + + Y+F +M D +W+V+IGG K
Sbjct: 500 VVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNS 559
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+EA+ ++++M G KPD T +LR C L+ GKE+H +V R + D+
Sbjct: 560 RIEEAMEIFRKM-QTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLART 618
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NAL+ MY KCG L +R VFD MP +D SWN MI +G + L LF M +V
Sbjct: 619 NALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVK 678
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T + V+SA H ++ EEG ++
Sbjct: 679 PDSATFTCVLSACS-----------HSMLV------------------------EEGVQI 703
Query: 356 FSRMESKDVVS-----WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
F+ M +V +T ++ Y + ++A Q M E P I + L+ C
Sbjct: 704 FNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME---PTAIAWKAFLAGCR 760
Query: 411 CLGNLDL----GIKLHQLAMRTGLISYIIIANTLI 441
N++L KL ++ G +Y+ + N L+
Sbjct: 761 VYKNVELAKISAKKLFEID-PNGSANYVTLFNILV 794
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +E+A++ MQ + DE + +++R C G +H V + +
Sbjct: 558 NSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLAR 617
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K G L + VF M +D+FSWN +I G EALSL+++M +
Sbjct: 618 TNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKML-LSM 676
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
VKPD TF CVL C ++ G ++ + R E + + ++ +Y + G L A
Sbjct: 677 VKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA 736
Query: 252 RLVFDGMP-KRDRISWNAMISG--YFENGEYMKGLMLFIMMREVL-VDP----DFMTLSS 303
MP + I+W A ++G ++N E K I +++ +DP +++TL +
Sbjct: 737 YGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAK-----ISAKKLFEIDPNGSANYVTLFN 791
Query: 304 VISASEL 310
++ ++L
Sbjct: 792 ILVTAKL 798
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 265/481 (55%), Gaps = 12/481 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + + + +V + ++++ G++ A Y F + +RD+++WN++I GY +AG+
Sbjct: 73 LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
E + + G++PD TFP VL+ C V D G ++H ++FG+ DV V
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAA 189
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI +Y + G +V AR++FD MP RD SWNAMISGY ++G + L L +R +
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM---- 245
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T+ S++SA GD G +H Y IK G ++ V N LI +Y FG+ ++ +KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM +D++SW ++I YE + P +A+ +Q M PD +T+ S+ S + LG +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365
Query: 417 LGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ +R G + I I N ++ MY+K +D A VF+ +P+K+VISW +II G
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425
Query: 476 RLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N + EA+ + M + N T VS+L AC++ GAL G ++H L+ G+
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMI 591
D F+ +L DMY +CGR+ A + F R S WN L+ + G G A F++M+
Sbjct: 486 DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545
Query: 592 D 592
D
Sbjct: 546 D 546
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 257/489 (52%), Gaps = 19/489 (3%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R +G +H + K V + + + ++ ++G + +A +F +M RD+ SWN +I
Sbjct: 164 RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMI 223
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
GY ++G EAL+L G D T +L C D RG +H + I+ G
Sbjct: 224 SGYCQSGNAKEALTLSD-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
E+++ V N LI +Y + G L + VFD M RD ISWN++I Y N + ++ ++LF
Sbjct: 279 ESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQE 338
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFG 347
MR + PD +TL S+ S +G+ + R V G+ ++ G F +D+++ N ++ MY G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASV 405
+ VF+ + +KDV+SW T+IS Y + +A+E Y +ME EG ++ T SV
Sbjct: 399 LVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSV 458
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L AC+ G L G+KLH ++ GL + + +L DMY KC +D AL +F+QIP N
Sbjct: 459 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNS 518
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EI 521
+ W ++I + +A++ F++M+ +KP+ +T V++LSAC+ G + G+ E+
Sbjct: 519 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEM 578
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ 579
I + + ++D+Y R G+++ A N S + D S W LL+ G
Sbjct: 579 MQTDYGITPSLKHY--GCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
Query: 580 ---GALAEE 585
G +A E
Sbjct: 637 VDLGKIASE 645
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 213/406 (52%), Gaps = 21/406 (5%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV+T + R C +L+ K +H ++ +V + L+ +Y G++ AR F
Sbjct: 56 DVHT---LFRYC---TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTF 109
Query: 256 DGMPKRDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
D + RD +WN MISGY G E ++ LF++ + PD+ T SV+ A V
Sbjct: 110 DHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSG--LQPDYRTFPSVLKACRNVT 167
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G ++H +K GF DV V LI +Y +G +F M ++D+ SW MIS
Sbjct: 168 D---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMIS 224
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y S A E + + +M D +T+ S+LSAC G+ + G+ +H +++ GL S
Sbjct: 225 GYCQS---GNAKEALTLSDGLRAM-DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N LID+Y++ + +VF ++ +++ISW SII LN + A++ F++M
Sbjct: 281 ELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR 340
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRM 550
L+ ++P+ +TL+S+ S +++G + + + LR G + + NA++ MY + G +
Sbjct: 341 LSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
A FN +DV +WN +++GYA+ G + A E + M + G
Sbjct: 401 DSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGG 446
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 209/421 (49%), Gaps = 12/421 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +G+ ++AL D ++ + D +V+L+ C ++ G+ +HS K
Sbjct: 220 NAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N + ++ +FG L VF +M RDL SWN +I Y A+ L
Sbjct: 276 HGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILL 335
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M + ++PD T + + +++ + V +R G + D+ + NA++ MY
Sbjct: 336 FQEMR-LSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMT 300
K G + AR VF+ +P +D ISWN +ISGY +NG + + ++ +M E + + T
Sbjct: 395 AKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGT 454
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
SV+ A G + G ++HG ++K G DV V L MY G ++ +F ++
Sbjct: 455 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP 514
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ V W T+I+C+ +KAV ++ M EG PD IT ++LSAC+ G +D G
Sbjct: 515 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW 574
Query: 421 LHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
++ M+T G+ + ++D+Y + ++ AL +P + W +++ R+
Sbjct: 575 CFEM-MQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRV 633
Query: 478 N 478
+
Sbjct: 634 H 634
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 285/563 (50%), Gaps = 39/563 (6%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
LC G L +A++ L +++ + V+ + ++ C R +++G +H + + +
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ LGN+ ++ + KF D+ A VF +M RD+ +W+ +I YA +A ++RM
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT- 149
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P+ TF +L+ C L++G+++H V G E DV V ALITMY KCG++
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF M +R+ +SW A+I ++ + + L+ M + + P+ +T S++++
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +H ++ + G D+ V N LI MY + +E ++F RM +DV+SW+
Sbjct: 270 TPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSA 329
Query: 370 MISCYEGSVLPDKAV--ETYQMME---AEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
MI+ Y S DK E +Q++E EG P+++T S+L AC G L+ G ++H
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAE 389
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS-------------- 470
+ G + + +MY+KC I +A +VF ++ +KNV++WTS
Sbjct: 390 LSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSA 449
Query: 471 -----------------IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+I G N + M +P+ VT+++IL AC +
Sbjct: 450 EKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGAL 509
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L GK +HA A+++G+ D + +L+ MY +CG++ A F+ + RD AWN +L
Sbjct: 510 AGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAML 569
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
GY + G G A + F++M+ +
Sbjct: 570 AGYGQHGDGLEAVDLFKRMLKER 592
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 282/556 (50%), Gaps = 49/556 (8%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A + M + NI + +++++ C ++G +H++V V +
Sbjct: 135 NNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAV 194
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A ++M+ K G++ A VF KM +R++ SW +I A+ +EA LY++M G
Sbjct: 195 ATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-AG 253
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ TF +L +C L RG+ +H H+ G E D+ V NALITMY KC + AR
Sbjct: 254 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAR 313
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKG-----LMLFIMMREVLVDPDFMTLSSVISA 307
+FD M KRD ISW+AMI+GY ++G K L MR V P+ +T S++ A
Sbjct: 314 EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRA 373
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G + GR++H + K+GF D S+ + MY G+ E E+VFS+M +K+VV+W
Sbjct: 374 CTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAW 433
Query: 368 TTMISCYEG-----------SVLPDKAVETYQMM--------------------EAEGSM 396
T+ +S Y S +P + V ++ +M +AEG
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +T+ ++L AC L L+ G +H A++ GL S ++A +LI MYSKC + +A V
Sbjct: 494 PDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTV 553
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F ++ +++ ++W +++ G + EA+ F++M+ + PN +TL +++SAC+R G +
Sbjct: 554 FDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLV 613
Query: 516 MCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
G+EI R+ P ++D+ R GR++ A S E D+S W+
Sbjct: 614 QEGREI----FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWH 669
Query: 569 ILLTGYAERGQGALAE 584
LL LAE
Sbjct: 670 ALLGACKSHNNVQLAE 685
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 221/469 (47%), Gaps = 38/469 (8%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L +A + + M + I + V+L+ C + G +HS +S+ + + NA
Sbjct: 239 LNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANA 298
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-----FDEALSLYQRMFWV 190
++M+ K + A +F +M RD+ SW+ +I GYA++G+ DE L +RM
Sbjct: 299 LITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR- 357
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL------------ 238
GV P+ TF +LR C L++G+++H + + G+E D + A+
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYE 417
Query: 239 -------------------ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
++MY+KCGDL A VF MP R+ +SWN MI+GY +NG+
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDI 477
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+K L M+ PD +T+ +++ A + + G+ VH +K+G D V L
Sbjct: 478 VKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSL 537
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I MY G E VF +M ++D V+W M++ Y +AV+ ++ M E P+E
Sbjct: 538 IGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNE 597
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFH 458
IT+ +V+SAC+ G + G ++ ++ + ++D+ + + +A E
Sbjct: 598 ITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQ 657
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+P + IS +LG ++ + + +L L+P+ ++ LS
Sbjct: 658 SMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLS 706
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 302/584 (51%), Gaps = 18/584 (3%)
Query: 10 SQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNE 69
+ LR ++R K I F + S A S+ + T + N++L
Sbjct: 23 THKELRSDVRVRKDVI------FNRASLRTVSDRADSITTFDRSVT------DANTQLRR 70
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
C +G+L+ A+K L + +I D L ++++LC + +G + + + L
Sbjct: 71 FCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLD 128
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
LG+ M+ GDL A VF ++ WN+L+ AK+G F ++ L+++M
Sbjct: 129 SNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM- 187
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV+ D YTF CV ++ + + G+++H ++++ G+ V N+L+ Y+K +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVD 247
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD M +RD ISWN++I+GY NG KGL +F+ M ++ D T+ SV +
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCA 307
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
LGR VH + +K FS + CN L+ MY G+ + + VF M + VVS+T+
Sbjct: 308 DSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTS 367
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y L +AV+ ++ ME EG PD T+ +VL+ CA LD G ++H+
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEND 427
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ I ++N L+DMY+KC + +A VF ++ K++ISW ++I G N + EAL F
Sbjct: 428 MGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFN 487
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+++ P+ T+ +L ACA + A G+EIH + +R G D + N+L+DMY +C
Sbjct: 488 LLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
G + A F+ +D+ +W +++ GY G G A F +M
Sbjct: 548 GALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 267/539 (49%), Gaps = 16/539 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +NEL +G ++ M + +D + + R + G LH + K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILK 223
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GN+ ++ ++K + A VF +M +RD+ SWN +I GY G ++ LS+
Sbjct: 224 SGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + G++ D+ T V C + G+ VH ++ + + N L+ MY
Sbjct: 284 FVQMLF-SGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYS 342
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL A++VF M R +S+ +MI+GY G + + LF M E + PD T+++
Sbjct: 343 KCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 304 VIS--ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
V++ A + DE G+ VH ++ + D+ V N L+ MY G+ E E VFS M
Sbjct: 403 VLNCCARNRLLDE--GKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV 460
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIK 420
KD++SW T+I Y + ++A+ + ++ E PDE T+A VL ACA L D G +
Sbjct: 461 KDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H MR G S +AN+L+DMY+KC + A +F I K+++SWT +I G ++
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGF 580
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFL 536
EA+ F +M ++P+ ++ VS+L AC+ G + G I H +I + +
Sbjct: 581 GKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 537 PNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DM R G + A+ +F N D + W LL G LAE K+ +
Sbjct: 641 --CIVDMLARTGNLSKAY-RFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFE 696
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 261/469 (55%), Gaps = 11/469 (2%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+S+RL N + S+ GD+ + F ++ +D+++WN +I Y + G F EA+ + ++
Sbjct: 110 ISIRLVNLYASL----GDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQL 165
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V + D YTFP VL+ C + D G+++H V + G++ DV V +LI MY + G
Sbjct: 166 LLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGF 222
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR +FD MP RD SWNAMISG +NG + L + MR ++ D +T++S++
Sbjct: 223 VGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPV 282
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+GD +H YVIK G ++ V N LI MY FGN + +KVF +M +DVVSW
Sbjct: 283 CAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSW 342
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
++I+ YE + P A + M+ G PD +T+ S+ S A + +H MR
Sbjct: 343 NSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMR 402
Query: 428 TG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G L+ ++I N ++DMY+K ID A +VF+ IP K+V+SW ++I G N + EA+
Sbjct: 403 RGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIE 462
Query: 487 FFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+R M +K N T VSIL+A A +GAL G IH H ++ + D F+ L+D+Y
Sbjct: 463 VYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLY 522
Query: 545 VRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMID 592
+CGR+ A F R+ S WN +++ + G G A + FR+M D
Sbjct: 523 GKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQD 571
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 245/464 (52%), Gaps = 6/464 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H V K V + + + M+ +FG +G A +F M RD+ SWN +I G
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLI 249
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +AL + M + G+ D T +L C + D+ +H++VI+ G E ++
Sbjct: 250 QNGNAAQALDVLDEMR-LEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY K G+L A+ VF M RD +SWN++I+ Y +N + + F M+
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN 368
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREE 351
++PD +TL S+ S + D K R VHG++++ G+ + V + N ++ MY G +
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDS 428
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACA 410
KVF+ + KDVVSW T+IS Y + L +A+E Y+MME + ++ T S+L+A A
Sbjct: 429 AHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYA 488
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+G L G+++H ++T L + + LID+Y KC + A+ +F+Q+P ++ + W +
Sbjct: 489 HVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNA 548
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II ++ +AL FR+M +KP+ VT +S+LSAC+ G + GK G
Sbjct: 549 IISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYG 608
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G ++ A++ D S W LL
Sbjct: 609 IKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 208/418 (49%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L NG+ QAL LD M+ I +D + +++ +C +H V K
Sbjct: 242 NAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIK 301
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA ++M+ KFG+LG A VF +M RD+ SWN +I Y + A
Sbjct: 302 HGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGF 361
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALITMY 242
+ +M + G++PD+ T + D K + VH ++R G+ + V+ NA++ MY
Sbjct: 362 FFKM-QLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMY 420
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G + A VF+ +P +D +SWN +ISGY +NG + + ++ MM E + + T
Sbjct: 421 AKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTW 480
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+++A VG + G +HG++IK DV V LI +Y G + +F ++
Sbjct: 481 VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPR 540
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V W +ISC+ +KA++ ++ M+ EG PD +T S+LSAC+ G +D G
Sbjct: 541 ESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L G+ + ++D+ + ++ A + +P + W +++ R++
Sbjct: 601 FHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIH 658
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L + +H ++ G + L+ +Y S G+ F +++ KDV +W +MIS Y
Sbjct: 91 LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150
Query: 376 GSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ +A++ YQ++ D T VL AC L + G K+H + G +
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDV 207
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+A +LI MYS+ + A +F +P +++ SW ++I GL N + +AL +M L
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ +SVT+ SIL CA++G + IH + ++ G+ F+ F+ NAL++MY + G + A
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F RDV +WN ++ Y + A FF KM
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKM 365
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 9/196 (4%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+EI S+ +C L +LH L + +G I I+ L+++Y+ + + F
Sbjct: 75 EEIDFNSLFDSCT---KTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTF 131
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGAL 515
QI K+V +W S+I N EA+ F +++L + + T +L AC L
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TL 188
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
+ G++IH ++G +D F+ +L+ MY R G + A + F+ RD+ +WN +++G
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248
Query: 575 AERGQGALAEEFFRKM 590
+ G A A + +M
Sbjct: 249 IQNGNAAQALDVLDEM 264
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 268/474 (56%), Gaps = 9/474 (1%)
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
KF A +FG+M R L+ WN L+ ++ ++E L + MF KPD +T P
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLP 64
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
L+ CG + ++ G+ +H V + +D+ V ++LI MY+KCG ++ A +FD + K
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D ++W++M+SG+ +NG + + F M+ V PD +TL +++SA + + +LGR
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VHG+VI+ GFS+D+S+ N L+ Y +E +F + KDV+SW+T+I+CY +
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+A+ + M +G+ P+ T+ VL ACA +L+ G K H+LA+R GL + + ++
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKP 497
L+DMY KC ++A VF +IP K+V+SW ++I G LN + ++ F M+L N +P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+++ +V +L +C+ +G L K H++ ++ G + F+ +L+++Y RCG + A F
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS---KGNWRKLMGLFRKC 607
N +D W L+TGY G+G A E F M+ S K N + + C
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 239/462 (51%), Gaps = 4/462 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L E+ L + M D L ++ C R + G +H V K
Sbjct: 29 NTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKK 88
Query: 124 TMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ S + +G++ + M++K G + A +F ++ D+ +W+ ++ G+ K G +A+
Sbjct: 89 DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVE 148
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++RM V PD T ++ C + + + G+ VH VIR G+ D+ +VN+L+ Y
Sbjct: 149 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K A +F + ++D ISW+ +I+ Y +NG + L++F M + +P+ T+
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+ A D + GR+ H I+ G +V V L+ MY+ + EE VFSR+ K
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKL 421
DVVSW +IS + + + +++E + +M E + PD I + VL +C+ LG L+
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G S I +L+++YS+C + A +VF+ I K+ + WTS+I G ++ +
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 482 FEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEI 521
+AL F M+ + +KPN VT +SILSAC+ G + G I
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 73 NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NGS QA+++ M ++ D L+ LV C G +H V + +
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ L+ + K A +F + ++D+ SW+ +I Y + G EAL ++ M
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM-DD 258
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+V T CVL+ C DL++G++ H IR G E +V V AL+ MY+KC A
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASEL 310
VF +P++D +SW A+ISG+ NG + + F IM+ E PD + + V+ +
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G + + H YVIK GF + + L+++Y G+ KVF+ + KD V WT++
Sbjct: 379 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 371 ISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
I+ Y KA+ET+ M+++ P+E+T S+LSAC+ G + G+++ +L +
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN-- 496
Query: 430 LISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
Y + N L+D+ + +D A+E+ ++P S T ILG L
Sbjct: 497 --DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP----FSPTPQILGTLL 543
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 249/452 (55%), Gaps = 4/452 (0%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ WN L+ K F E L ++ R+ +KPD +T+P VL+ C G+ + GK V
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H HVI+ G+ DV V+++ + MY KC A +FD MP+RD SWN +IS Y+++G+
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
K L LF M+ PD +TL++VIS+ + D + G+E+H +++ GF+ D V + L
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G E ++VF +++ K+VVSW +MI+ Y +E ++ M+ EG P
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 500
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T++S+L AC+ NL LG +H +R + + I + ++LID+Y KC I A VF
Sbjct: 501 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 560
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG 518
+P NV+SW +I G EAL+ F M +KP+++T S+L AC+++ L G
Sbjct: 561 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 620
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
KEIH + + + + ALLDMY +CG + A + FN ERD +W ++ Y
Sbjct: 621 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 680
Query: 578 GQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
GQ A + F KM D+K + + + C
Sbjct: 681 GQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 712
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 269/494 (54%), Gaps = 20/494 (4%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
GY G +H+ V K+ + V + ++ + M+ K A +F +M +RD+ SWN +I
Sbjct: 315 GY--GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 372
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y + G ++AL L++ M V G KPD T V+ +C + DL+RGKE+H+ ++R G+
Sbjct: 373 CYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 431
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D V +AL+ MY KCG L A+ VF+ + +++ +SWN+MI+GY G+ + LF M
Sbjct: 432 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 491
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E + P TLSS++ A + +LG+ +HGY+I+ D+ V + LI +Y GN
Sbjct: 492 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551
Query: 350 EEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
E VF M +VVSW MIS Y GS L +A+ + M G PD IT SVL
Sbjct: 552 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYL--EALVIFTDMRKAGVKPDAITFTSVLP 609
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ L L+ G ++H + + L ++ L+DMY+KC +D+AL +F+Q+P+++ +S
Sbjct: 610 ACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS 669
Query: 468 WTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
WTS+I + ++FEAL F KM + KP+ VT ++ILSAC+ G + G +
Sbjct: 670 WTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG----CYYF 725
Query: 527 RIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERG 578
+A GF P + L+D+ R GR++ A+ DV + L +
Sbjct: 726 NQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHK 785
Query: 579 QGALAEEFFRKMID 592
+ L E+ R +I+
Sbjct: 786 KLDLGEQIGRLLIE 799
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 209/391 (53%), Gaps = 2/391 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL+ + M+ D L ++ C + G +H + ++ L +
Sbjct: 377 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV 436
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G L A VF ++ +++ SWN +I GY+ G + L++RM G
Sbjct: 437 SSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDE-EG 495
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++P + T +L C +L+ GK +H ++IR EAD+ V ++LI +Y KCG++ A
Sbjct: 496 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 555
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MPK + +SWN MISGY + G Y++ L++F MR+ V PD +T +SV+ A +
Sbjct: 556 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 615
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+E+H ++I+ + V L+ MY G +E +F+++ +D VSWT+MI+
Sbjct: 616 VLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 675
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLI 431
Y +A++ ++ M+ + PD++T ++LSAC+ G +D G +Q+ G
Sbjct: 676 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 735
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+ + LID+ + + +A E+ + PD
Sbjct: 736 PAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 172/299 (57%), Gaps = 7/299 (2%)
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L+ V + S L +E LG+ +H ++ +G +++++C LI +Y S + + VF +E
Sbjct: 200 LARVTAGSAL--EELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 257
Query: 361 SK-DVVSWT-TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ D+ W M +C + + + ++++ PD T SVL AC+ LG + G
Sbjct: 258 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 317
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +++G +++ ++ + MY+KC + A+++F ++P+++V SW ++I +
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ +AL F +M ++ KP+SVTL +++S+CAR+ L GKEIH +R G A DGF+
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437
Query: 538 NALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+AL+DMY +CG ++ A F +R +V +WN ++ GY+ +G E FR+M D +G
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM-DEEG 495
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 4/312 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L G + ++ M E I L +++ C G ++H + +
Sbjct: 469 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 528
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + ++ + ++ K G++G A VF M ++ SWNV+I GY K G + EAL +
Sbjct: 529 NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVI 588
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GVKPD TF VL C + L++GKE+H +I E + V+ AL+ MY
Sbjct: 589 FTDM-RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYA 647
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A +F+ +P+RD +SW +MI+ Y +G+ + L LF M++ PD +T +
Sbjct: 648 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707
Query: 304 VISASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
++SA G G +I + GF V + LI + G E ++ R
Sbjct: 708 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 767
Query: 362 -KDVVSWTTMIS 372
+DV +T+ S
Sbjct: 768 REDVGLLSTLFS 779
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 288/544 (52%), Gaps = 6/544 (1%)
Query: 50 LNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
+++ T + + N++L C +G+LE A+K L + +I D L ++++LC +
Sbjct: 51 VDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSK 108
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
+G + + + + LG+ M+ GDL A VF ++ WN+L+
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
AK+G F ++ L+++M GV+ D YTF CV ++ + + G+++H +++ G+
Sbjct: 169 ELAKSGDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 227
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V N+L+ Y+K + AR VFD M +RD ISWN++I+GY NG KGL +F+ M
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++ D T+ SV + LGR VH +K FS + CN L+ MY G+
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ + VF M + VVS+T+MI+ Y L +AV+ ++ ME EG PD T+ +VL+ C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LD G ++H+ L I ++N L+DMY+KC + +A VF ++ K++ISW
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+II G N + EAL F ++ P+ T+ +L ACA + A G+EIH + +R
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
G D + N+L+DMY +CG + A F+ +D+ +W +++ GY G G A
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 587 FRKM 590
F +M
Sbjct: 588 FNQM 591
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 262/537 (48%), Gaps = 12/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +NEL +G ++ M + +D + + R G LH + K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GN+ ++ ++K + A VF +M +RD+ SWN +I GY G ++ LS+
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M V G++ D+ T V C + G+ VH ++ + + N L+ MY
Sbjct: 284 FVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL A+ VF M R +S+ +MI+GY G + + LF M E + PD T+++
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V++ G+ VH ++ + D+ V N L+ MY G+ +E E VFS M KD
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLH 422
++SW T+I Y + ++A+ + ++ E PDE T+A VL ACA L D G ++H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
MR G S +AN+L+DMY+KC + A +F I K+++SWT +I G ++
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 483 EALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPN 538
EA+ F +M ++ + ++ VS+L AC+ G + G I H +I + +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA-- 640
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DM R G + A+ +F N D + W LL G LAE+ K+ +
Sbjct: 641 CIVDMLARTGDLIKAY-RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 219/439 (49%), Gaps = 5/439 (1%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DR + N + + ++G + A+ L + G D T VL+ C LK GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EV + G+ D ++ + L MY CGDL A VFD + + WN +++ ++G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
++ + LF M V+ D T S V + + G ++HG+++K GF + SV N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ YL + KVF M +DV+SW ++I+ Y + L +K + + M G
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D TI SV + CA + LG +H + ++ NTL+DMYSKC +D A VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
++ D++V+S+TS+I G + EA+ F +M + P+ T+ ++L+ CAR L
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
GK +H + FD F+ NAL+DMY +CG M+ A F+ +D+ +WN ++ GY+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 576 ERGQGALAEEFFRKMIDSK 594
+ A F +++ K
Sbjct: 475 KNCYANEALSLFNLLLEEK 493
>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 291/536 (54%), Gaps = 19/536 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG +AL M++ N+ D +++ C ++ G + + V +
Sbjct: 2 NSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLE 61
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +FGDL A VF +M RD+ SWN LI GY+ G++DEAL +
Sbjct: 62 IGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEI 121
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y + + G+KPD +T VL CGG+ +K G+ +H V + G DV + N L++MY
Sbjct: 122 YYEL-RIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYF 180
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL--VDPDFMTL 301
K G L+ A+ VF+ M +D +SWN +I GY + + + + LF RE++ PD +T+
Sbjct: 181 KFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLF---REMVKRFRPDLLTI 237
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV+ A L+ D + G+ VH Y+++ G DV+ N +I Y G+ K F R++
Sbjct: 238 TSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKC 297
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D VSW T+I+ Y S + V+ ++ M+ + PD IT ++LS L + +LG ++
Sbjct: 298 RDSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLK-PDSITFVTLLSISTRLADTELGKEI 356
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H + G S ++++N L+DMYSKC + +L+VF + +++++W +II ++
Sbjct: 357 HCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACV---QA 413
Query: 482 FEALIFFRKM--MLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ + FR + M N L P+ TL+ IL C+ I A GKE+HA + G F+ +P
Sbjct: 414 EDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFG--FESTVP 471
Query: 538 --NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
NAL++MY +C +K F +DV W L++ Y G+G A F +M
Sbjct: 472 VGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEM 527
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 245/429 (57%), Gaps = 5/429 (1%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I G F +AL LY +M VKPD YTFP V+ C + D + G V HV
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFN-VKPDTYTFPSVINACAALGDFEIGNVVQNHV 59
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ G+ D+ + NAL+ MY + GDLV+AR VF+ M RD +SWN++ISGY NG + + L
Sbjct: 60 LEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEAL 119
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
++ +R + PD TLSSV+ A + K G +HG V K+G + DV + N L+ MY
Sbjct: 120 EIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMY 179
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
FG + ++VF++M KD VSW T+I Y L +++++ ++ M + PD +TI
Sbjct: 180 FKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM-VKRFRPDLLTIT 238
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVL AC L +L+ G +H +R+G+ + +N +ID Y+KC + + + F +I +
Sbjct: 239 SVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCR 298
Query: 464 NVISWTSIILGLRLNNRSF-EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIH 522
+ +SW ++I G + +RS+ E + F+KM ++LKP+S+T V++LS R+ GKEIH
Sbjct: 299 DSVSWNTLINGY-IQSRSYGEGVKLFKKMKMDLKPDSITFVTLLSISTRLADTELGKEIH 357
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGA 581
++G D + NAL+DMY +CG +K + F N RD+ WN ++ +
Sbjct: 358 CDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCT 417
Query: 582 LAEEFFRKM 590
LA +M
Sbjct: 418 LAFRMISQM 426
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 170/323 (52%), Gaps = 2/323 (0%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+ +++R C R + G ++H + ++ V N + + K GDL + F ++
Sbjct: 236 TITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRI 295
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
RD SWN LI GY ++ + E + L+++M +KPD TF +L + D + G
Sbjct: 296 KCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKM--DLKPDSITFVTLLSISTRLADTELG 353
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
KE+H + + G+++D+ V NAL+ MY KCG++ + VF+ M RD ++WN +I+ +
Sbjct: 354 KEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQA 413
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + MR + PD TL ++ L+ ++ G+EVH K GF V V
Sbjct: 414 EDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVG 473
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI+MY N + +VF M++KDVV+WT ++S Y KA+ + ME G +
Sbjct: 474 NALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGII 533
Query: 397 PDEITIASVLSACACLGNLDLGI 419
PD I +++ AC+ G+++ G+
Sbjct: 534 PDHIAFVAIIYACSHSGSVEEGL 556
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 2/227 (0%)
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W ++I + L KA++ Y M+ PD T SV++ACA LG+ ++G + +
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL- 485
G + I N L+DMY++ + KA VF ++ ++++SW S+I G N EAL
Sbjct: 61 EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
I++ + LKP++ TL S+L AC + A+ G+ IH ++G+ D + N LL MY
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYF 180
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ GR+ A FN +D +WN L+ GY + + + FR+M+
Sbjct: 181 KFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMV 227
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 278/523 (53%), Gaps = 7/523 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N AL SM+ ++ +E L +++ C G+ G LH++ T + +
Sbjct: 81 NAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A VF + C+R+ SWN L+ Y K A+ ++ M W G
Sbjct: 138 ANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVW-G 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P+ + F CV+ C G DL+ G++VH VIR GY+ DV NAL+ MY K GD+ A
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+VF +P+ D +SWNA ISG +G L L + M+ + P+ TLSS++ A
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGS 316
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++HG+++K D + L+ MY G ++ +KVF + +D+V W +I
Sbjct: 317 GAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S +A+ + M EG + T+A+VL + A L + ++H LA + G +
Sbjct: 377 SGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFL 436
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + N LID Y KC C++ A VF + ++I++TS+I L + +A+ F +M
Sbjct: 437 SDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEM 496
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L P+ L S+L+ACA + A GK++HAH ++ D F NAL+ Y +CG +
Sbjct: 497 LRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSI 556
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A F+ E+ V +W+ ++ G A+ G G A + F +M+D
Sbjct: 557 EDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD 599
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 250/514 (48%), Gaps = 5/514 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ N A+K M + +E +V C R + G +H++V +
Sbjct: 171 NGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIR 230
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T V NA + M+ K GD+ A VFGK+ + D+ SWN I G G AL L
Sbjct: 231 TGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALEL 290
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+M G+ P+V+T +L+ C G G+++H +++ ++D + L+ MY
Sbjct: 291 LLQM-KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYA 349
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A+ VFD +P+RD + WNA+ISG ++ + L LF MR+ D + TL++
Sbjct: 350 KHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAA 409
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ ++ + R+VH K+GF D V N LI Y +VF + S D
Sbjct: 410 VLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYD 469
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++++T+MI+ + A++ + M +G PD ++S+L+ACA L + G ++H
Sbjct: 470 IIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ +S + N L+ Y+KC I+ A F +P+K V+SW+++I GL +
Sbjct: 530 HLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKR 589
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALL 541
AL F +M+ ++ PN +T+ S+L AC G + K ++ G+ ++
Sbjct: 590 ALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMI 649
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
D+ R G++ A NS + + + W LL
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 187/381 (49%), Gaps = 8/381 (2%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L +G +H H+++ G A N L++ Y KC AR VFD +P +SW+++++
Sbjct: 20 LLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTA 77
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y N L F MR V + L V+ + D G ++H + G D
Sbjct: 78 YSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP---DAGFGTQLHALAMATGLGGD 134
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ V N L+ MY FG +E VF ++ VSW ++S Y + AV+ + M
Sbjct: 135 IFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMV 194
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G P+E + V++AC +L+ G K+H + +RTG + AN L+DMYSK I
Sbjct: 195 WGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIR 254
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A VF ++P+ +V+SW + I G L+ AL +M + L PN TL SIL ACA
Sbjct: 255 MAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNI 569
GA G++IH ++ D ++ L+DMY + G + A F+ +RD+ WN
Sbjct: 315 GSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNA 374
Query: 570 LLTGYAERGQGALAEEFFRKM 590
L++G + Q A A F +M
Sbjct: 375 LISGCSHGAQHAEALSLFCRM 395
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI +L+ A +L G +H +++GL + + N L+ YSKC+ A VF +I
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
PD +SW+S++ N +AL FR M +++ N L +L G G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGT 120
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAER 577
++HA A+ G+ D F+ NAL+ MY G + A F+ ER+ +WN L++ Y +
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 578 GQGALAEEFFRKMI 591
+ + A + F +M+
Sbjct: 181 DRCSHAVKVFGEMV 194
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 272/502 (54%), Gaps = 3/502 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D+ +++LC +G+ +H VV K V +GN L ++ G L A +
Sbjct: 8 LDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRL 67
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M +RD+ SWN +IG + G + EA + Y M +KP++ + +L + D
Sbjct: 68 FDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALED 127
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ + +H + ++ G ++ V NAL+ Y KCG + VF+ +++ +SWN++I+G
Sbjct: 128 EEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIING 187
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G L F MM + P+ +T+SS++ + K G+E+HG+ ++MG D
Sbjct: 188 LACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETD 247
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + N LI MY G+ E +F ++ +++VSW MI+ Y + LP +A+ M+
Sbjct: 248 IFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQE 307
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G P+ +T +VL ACA LG L G ++H + +R GL S + ++N+LIDMY+KC C+
Sbjct: 308 TGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHS 367
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACAR 511
A VF+ K+ +S+ +I+G + ++L F +M +L KP+ V+ V ++SACA
Sbjct: 368 ARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACAN 426
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+ AL GKE+H ALR + F+ N+LLD Y +CGR+ A FN +DV++WN +
Sbjct: 427 LAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTM 486
Query: 571 LTGYAERGQGALAEEFFRKMID 592
+ GY G+ A F M D
Sbjct: 487 ILGYGMIGELETAISMFEAMRD 508
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 191/421 (45%), Gaps = 47/421 (11%)
Query: 35 KTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVD 94
K+ H S++ + L+ +N S N LN L L +A++++ MQE C +
Sbjct: 260 KSGH-STEASTIFHNLDRRNIVSWNAMIANYALNRLPL-----EAIRFVIQMQETGECPN 313
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
N++ C G +H++ + + + N+ + M+ K G L A VF
Sbjct: 314 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF- 372
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+D S+N+LI GY++ ++L+L+ M +G KPDV +F V+ C + LK
Sbjct: 373 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-KPDVVSFVGVISACANLAALK 431
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+GKEVH +R + + V N+L+ Y KCG + A +F+ + +D SWN MI GY
Sbjct: 432 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 491
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
GE + +F MR+ V D ++ +V+SA HG +++ G+
Sbjct: 492 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACS-----------HGGLVERGWQ---- 536
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
Y S E + R+E + + +T M+ + ++A + Q +
Sbjct: 537 --------YFS-------EMLAQRLEPTE-MHYTCMVDLLGRAGFVEEAAKLIQQLPIA- 579
Query: 395 SMPDEITIASVLSACACLGNLDLGIKL--HQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD ++L AC GN++LG + H ++ Y I+ L ++Y++ D+
Sbjct: 580 --PDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYIL---LSNIYAETGRWDE 634
Query: 453 A 453
A
Sbjct: 635 A 635
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 114/207 (55%), Gaps = 3/207 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G D+ T VL C+ ++ G+++H + + G + + + NTL+ +Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILS 507
++ A +F ++P+++V+SW +II L +N EA ++ M+L +KPN V+++S+L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSA 566
A + + IH +++++G+ NAL+D Y +CG +K W FN E++ +
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDS 593
WN ++ G A +G+ A FR MID+
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDA 207
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/562 (30%), Positives = 292/562 (51%), Gaps = 11/562 (1%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLD-SMQELNICVDEDALVNLVRLCEWKRGY 111
Q++ ++T NS +N +C +AL + + +I ++ NL+ C R
Sbjct: 117 QHSRELST---NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSL 173
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
G +H + K+ + L N L+M+ K G L A F M R++ SW ++I GY
Sbjct: 174 KYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGY 233
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
++ G ++A+ +Y +M G PD TF +++ C D+ G+++H HVI+ GY+
Sbjct: 234 SQNGQENDAIIMYIQMLQ-SGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHH 292
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMR 290
+ NALI+MY + G +V A VF + +D ISW +MI+G+ + G ++ L LF M R
Sbjct: 293 LIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFR 352
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ P+ SV SA + + + GR++HG K G +V L MY FG
Sbjct: 353 QGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLP 412
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ F ++ES D+VSW +I+ + S ++A+ + M G MPD IT S+L AC
Sbjct: 413 SAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACG 472
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWT 469
++ G ++H ++ GL + N+L+ MY+KC + A VF + + N++SW
Sbjct: 473 SPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWN 532
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I+ + ++ E F+ M+ + KP+++T+ +IL CA + +L G ++H +++
Sbjct: 533 AILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKS 592
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFF 587
G+ D + N L+DMY +CG +K A + F S + D+ +W+ L+ GYA+ G G A F
Sbjct: 593 GLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLF 652
Query: 588 RKM--IDSKGNWRKLMGLFRKC 607
R M + + N +G+ C
Sbjct: 653 RMMKNLGVQPNEVTYLGVLSAC 674
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 272/560 (48%), Gaps = 42/560 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICV-------------DEDALV----------- 99
N LN GSL+ A K D+MQ N+ + DA++
Sbjct: 196 NHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYF 255
Query: 100 -------NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
++++ C D G LH V K+ + NA +SM+ +FG + HA V
Sbjct: 256 PDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDV 315
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +DL SW +I G+ + G+ EAL L++ MF G +P+ + F V C + +
Sbjct: 316 FTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLE 375
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ G+++H +FG +V +L MY K G L A F + D +SWNA+I+
Sbjct: 376 PEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAA 435
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ ++G+ + + F M + PD +T S++ A G ++H Y+IK+G +
Sbjct: 436 FSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKE 495
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+VCN L+ MY N + VF + E+ ++VSW ++S + +++M
Sbjct: 496 AAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLML 555
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+ PD ITI ++L CA L +L++G ++H ++++GL+ + ++N LIDMY+KC +
Sbjct: 556 FSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLK 615
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A +VF + +++SW+S+I+G EAL FR M L ++PN VT + +LSAC+
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
Query: 511 RIGALMCGKEIH-AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-----QFNSNERDV 564
IG + G + + +G+ + ++D+ R G + A N FN D+
Sbjct: 676 HIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNP---DI 732
Query: 565 SAWNILLTGYAERGQGALAE 584
+ W LL G +AE
Sbjct: 733 TMWKTLLASCKTHGNVDIAE 752
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 233/444 (52%), Gaps = 5/444 (1%)
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
K R+L S N I K + EAL + ++ + T+ ++ C + LK
Sbjct: 116 KQHSREL-STNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLK 174
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
GK++H H+++ + D+ + N ++ MY KCG L AR FD M R+ +SW MISGY
Sbjct: 175 YGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYS 234
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+NG+ ++++I M + PD +T S+I A + GD LGR++HG+VIK G+ +
Sbjct: 235 QNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLI 294
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI MY FG VF+ + +KD++SW +MI+ + +A+ ++ M +G
Sbjct: 295 AQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQG 354
Query: 395 -SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P+E SV SAC L + G ++H + + GL + +L DMY+K + A
Sbjct: 355 FYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSA 414
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
+ F+QI +++SW +II + EA+ FF +MM L P+ +T +S+L AC
Sbjct: 415 IRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSP 474
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNIL 570
+ G +IH++ ++IG+ + + N+LL MY +C + A+N F S ++ +WN +
Sbjct: 475 VTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAI 534
Query: 571 LTGYAERGQGALAEEFFRKMIDSK 594
L+ + Q F+ M+ S+
Sbjct: 535 LSACLQHKQAGEVFRLFKLMLFSE 558
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 264/500 (52%), Gaps = 3/500 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
D V L++ C KR E +H+ + + + L N ++M+VK + A V
Sbjct: 25 TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M RD+ SWN LI YA+ GF +A L++ M G + P+ T+ +L C +
Sbjct: 85 FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI-PNKITYISILTACYSPAE 143
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK++H +I+ GY+ D V N+L++MY KCGDL RAR VF G+ RD +S+N M+
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + + L LF M + PD +T +++ A G+ +H ++ G + D
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ V L+ M + G+ + ++ F + +DVV + +I+ +A E Y M +
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G + T S+L+AC+ L+ G +H G S + I N LI MY++C + K
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A E+F+ +P +++ISW +II G EA+ +++M +KP VT + +LSACA
Sbjct: 384 ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACAN 443
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
A GK IH LR G+ +G L NAL++MY RCG + A N F + RDV +WN +
Sbjct: 444 SSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSM 503
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ G+A+ G A + F++M
Sbjct: 504 IAGHAQHGSYETAYKLFQEM 523
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 275/529 (51%), Gaps = 3/529 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G ++A + + MQ ++ ++++ C + G +HS + K
Sbjct: 97 NSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIK 156
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
R+ N+ LSM+ K GDL A VF + RD+ S+N ++G YA+ + E L L
Sbjct: 157 AGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGL 216
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G+ PD T+ +L L GK +H + G +D+ V AL+TM V
Sbjct: 217 FGQMS-SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV 275
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CGD+ A+ F G+ RD + +NA+I+ ++G ++ + MR V + T S
Sbjct: 276 RCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLS 335
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + G+ +H ++ + G S DV + N LI MY G+ + ++F M +D
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW +I+ Y +A+ Y+ M++EG P +T +LSACA G +H+
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R+G+ S +AN L++MY +C + +A VF ++VISW S+I G +
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F++M L+P+++T S+LS C AL GK+IH G+ D L NAL++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY+RCG ++ A N F+S RDV +W ++ G A++G+ A E F +M
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM 624
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 254/519 (48%), Gaps = 14/519 (2%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+++ L M I D+ +NL+ DEG +H + + + +R+G A
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++M V+ GD+ A F + DRD+ +N LI A+ G EA Y RM GV
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM-RSDGVAL 328
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ T+ +L C L+ GK +H H+ G+ +DV + NALI+MY +CGDL +AR +F
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
MPKRD ISWNA+I+GY + + + L+ M+ V P +T ++SA
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +H +++ G + + N L+ MY G+ E + VF +++DV+SW +MI+ +
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ A + +Q M+ E PD IT ASVLS C L+LG ++H +GL +
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN 568
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N LI+MY +C + A VFH + ++V+SWT++I G +A+ F +M
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEG 628
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCG 548
P+ T SILSAC G ++ G +I + + G LP L+ + R
Sbjct: 629 FRPPDGSTFTSILSACNHAGLVLEGYQIFSSM----ESEYGVLPTIEHYGCLVGLLGRAR 684
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
R + A N D + W LL G ALAE
Sbjct: 685 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEH 723
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +GS E A K MQ + D +++ C+ + G +H +++
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L V LGNA ++M+++ G L A VF + RD+ SW +IGG A G +A+ L
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMY 242
+ +M G PD TF +L C + G ++ + +G ++ L+ +
Sbjct: 621 FWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLL 680
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAM-----ISGYFENGEYMKGLMLFIMMREVLVDP 296
+ A + + MP D W + I G E+ L + R V
Sbjct: 681 GRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV-- 738
Query: 297 DFMTLSSVISAS 308
++ LS+V +A+
Sbjct: 739 -YILLSNVYAAA 749
>gi|168008904|ref|XP_001757146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691644|gb|EDQ78005.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 272/515 (52%), Gaps = 25/515 (4%)
Query: 82 YLDSMQELNICVDEDAL--VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
Y+D +Q C L V V C K G D+ Y+ N + +
Sbjct: 2 YVDVLQR---CFKHKDLTSVKQVHDCILKSGMDQNPYV---------------ANKLMRV 43
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+++ G + A +VF K+ +++F+W +IGGYA+ G +A+ +Y +M GG +P+ T
Sbjct: 44 YIRCGKVQDARHVFDKLVKKNVFNWTTMIGGYAEHGRPADAIEVYNQMRQEGG-RPNEVT 102
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ +L+ C LK GKE+H H+ G+ +DV V AL+ MY K G + ARLVFD M
Sbjct: 103 YLSILKACACPVGLKWGKEIHAHISHGGFRSDVPVQTALVNMYAKSGSIKDARLVFDEMA 162
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG-- 317
+R+ I+WN MI G ++G + LF+ M+E PD T S+++A+ LG
Sbjct: 163 ERNVITWNVMIGGLAQHGFGQEAFSLFLQMQEEGFVPDSTTYLSILTATACSSAGALGWV 222
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+EVH + +K GF D+ VCN L+ +Y G+ ++ VF M +DV+SW+ MI +
Sbjct: 223 KEVHRHAVKAGFDSDMRVCNALVHVYSKSGSVDDARLVFEGMLDRDVISWSAMIGGLAQN 282
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A + M+ EG +P+ T S+L+A A G L+ ++H A + GL S +
Sbjct: 283 GCGHEAFSLFLKMQREGVIPNVTTYVSILTASASAGALEWVKQVHNHARKAGLGSDFRVC 342
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLK 496
N L+ MY+K ID A VF Q+ +NV +W ++I GL + EA +F R +
Sbjct: 343 NALVHMYAKSGSIDDARLVFDQMSVRNVFTWNAMIGGLAQHGCGQEAFSLFLRMRREGVV 402
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+++T +SIL+A A GAL KE+H A++ G+ D + NAL+ MY + G + A
Sbjct: 403 PDAITYMSILNASASTGALGWVKEVHRQAVQAGLDSDVRVGNALVHMYCKTGSISDARLM 462
Query: 557 FNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ERDV W +++G A+ G A F +M
Sbjct: 463 FDGMVERDVITWTAMISGLAQNECGQEAFSLFLQM 497
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 235/447 (52%), Gaps = 4/447 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G A++ + M++ +E +++++ C G G +H+ +S V +
Sbjct: 78 HGRPADAIEVYNQMRQEGGRPNEVTYLSILKACACPVGLKWGKEIHAHISHGGFRSDVPV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A ++M+ K G + A VF +M +R++ +WNV+IGG A+ GF EA SL+ +M G
Sbjct: 138 QTALVNMYAKSGSIKDARLVFDEMAERNVITWNVMIGGLAQHGFGQEAFSLFLQMQEEGF 197
Query: 193 VKPDVYTFPCVLRT--CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V PD T+ +L C L KEVH H ++ G+++D+ V NAL+ +Y K G +
Sbjct: 198 V-PDSTTYLSILTATACSSAGALGWVKEVHRHAVKAGFDSDMRVCNALVHVYSKSGSVDD 256
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARLVF+GM RD ISW+AMI G +NG + LF+ M+ V P+ T S+++AS
Sbjct: 257 ARLVFEGMLDRDVISWSAMIGGLAQNGCGHEAFSLFLKMQREGVIPNVTTYVSILTASAS 316
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G + ++VH + K G D VCN L+ MY G+ ++ VF +M ++V +W M
Sbjct: 317 AGALEWVKQVHNHARKAGLGSDFRVCNALVHMYAKSGSIDDARLVFDQMSVRNVFTWNAM 376
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I +A + M EG +PD IT S+L+A A G L ++H+ A++ GL
Sbjct: 377 IGGLAQHGCGQEAFSLFLRMRREGVVPDAITYMSILNASASTGALGWVKEVHRQAVQAGL 436
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + N L+ MY K I A +F + +++VI+WT++I GL N EA F +
Sbjct: 437 DSDVRVGNALVHMYCKTGSISDARLMFDGMVERDVITWTAMISGLAQNECGQEAFSLFLQ 496
Query: 491 MML-NLKPNSVTLVSILSACARIGALM 516
M P + T SIL+ C G M
Sbjct: 497 MQREGFIPVATTYASILNVCTSTGLAM 523
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V +L C + L K++H L+ G+ + ++ N L+ +Y+RCG+++ A + F+ +
Sbjct: 3 VDVLQRCFKHKDLTSVKQVHDCILKSGMDQNPYVANKLMRVYIRCGKVQDARHVFDKLVK 62
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG--NWRKLMGLFRKC 607
++V W ++ GYAE G+ A A E + +M G N + + + C
Sbjct: 63 KNVFNWTTMIGGYAEHGRPADAIEVYNQMRQEGGRPNEVTYLSILKAC 110
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 254/464 (54%), Gaps = 9/464 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LG+ L M+ K G + A VF + R LFSWN +I +AK +A+ +++ M
Sbjct: 23 LGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMD-SA 81
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+KPD T VL C + DL+ GK++H + G + + V NAL++MY +C L A
Sbjct: 82 GIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVA 141
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R+VFD + + +SWNAMI+ GE + L LF M ++P+ +T +SV +A L+
Sbjct: 142 RVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLL 198
Query: 312 GDEK-LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D + +G+ +H + +V+V ++ MY FG +VF+ ++ K+VVSW M
Sbjct: 199 PDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAM 258
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y + L +A+E Y M A+ DE+T+ L A L L LGI+LH+L++ G
Sbjct: 259 LGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGY 318
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I + N LI MY KC +D A VF ++ +V+SWT++I+ + R+ EAL +++
Sbjct: 319 DSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQ 378
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCG 548
M ++P+ VT S+LSAC+ L G+ +HA L F DG L AL++MYV+CG
Sbjct: 379 MEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYVKCG 438
Query: 549 RMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+ + F S + + V WN ++T Y + G A + + M
Sbjct: 439 RLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMM 482
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 267/509 (52%), Gaps = 14/509 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAF 136
+A++ SM I D L +++ C R +EG +HS +++ +S S+ + NA
Sbjct: 70 KAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS-SIIVQNAL 128
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ + L A VF K+ + + SWN +I A+ G ++AL L++RM ++P+
Sbjct: 129 VSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM----ELEPN 184
Query: 197 VYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
TF V C +PD + GK +H + EA+V V A++TMY K G + AR VF
Sbjct: 185 EVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVF 244
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+G+ ++ +SWNAM+ Y +N + L ++ M V D +T+ + S + K
Sbjct: 245 NGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLK 304
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG E+H + G+ ++ V N LI MY + +VFS++ + DVVSWT +I Y
Sbjct: 305 LGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYT 364
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGLISY 433
+A+E Y+ ME EG PD++T SVLSAC+ +L+LG LH LA + G
Sbjct: 365 QHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDG 424
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM- 491
+++A LI+MY KC +D + E+F D K V+ W ++I S A+ + M
Sbjct: 425 VLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMK 483
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRM 550
L P+ TL SILSACA + L G+++H + + + + NAL+ MY CG +
Sbjct: 484 QRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEI 543
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ A F RDV +W IL++ Y + G
Sbjct: 544 REAKAVFKRMKNRDVVSWTILISAYVQGG 572
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 256/504 (50%), Gaps = 15/504 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVVS 122
N+ + G EQAL+ M+ + +E ++ C + E G +H +
Sbjct: 157 NAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIR 213
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ +V + A ++M+ KFG +G A VF + +++ SWN ++G Y + EAL
Sbjct: 214 GSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALE 273
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Y M V+ D T L + LK G E+H + GY++++ V NALI+MY
Sbjct: 274 VYHEMV-AQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMY 332
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC +L AR VF + D +SW A+I Y ++G + L L+ M ++PD +T +
Sbjct: 333 GKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFT 392
Query: 303 SVISASELVGDEKLGREVHGYVI--KMGFSDDVSVCNPLIKMYLSFGNREEGEKVF-SRM 359
SV+SA D +LG+ +H ++ K GFSD V V LI MY+ G + ++F S
Sbjct: 393 SVLSACSNTSDLELGQALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCK 451
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++K VV W MI+ YE AV+ Y MM+ G PDE T++S+LSACA L +L+ G
Sbjct: 452 DTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGE 511
Query: 420 KLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+LH ++ ++ N LI MY+ C I +A VF ++ +++V+SWT +I
Sbjct: 512 QLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQG 571
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL--RIGVAFDGF 535
+ AL +R+M++ ++P T + + AC G + K + RI FD +
Sbjct: 572 GDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWYFQSMIEDRITPTFDHY 631
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS 559
+ ++ + R G+++ A + +S
Sbjct: 632 --SCVVTVLSRAGKLEEAEDLLHS 653
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 200/381 (52%), Gaps = 6/381 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L +G+ +H H++ G +D + + L+ MY KCG + A VF +P+R SWN +I+
Sbjct: 2 LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ +N K + +F M + PD TLSSV+ A + D + G+++H + G S
Sbjct: 62 FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ V N L+ MY + VF ++ESK VVSW MI+ ++A++ ++ ME
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMEL 181
Query: 393 EGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
E P+E+T ASV +AC+ L + ++G ++H + L + + +A ++ MY K +
Sbjct: 182 E---PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVG 238
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A +VF+ I KNV+SW +++ NN EAL + +M+ ++ + VT+V L A
Sbjct: 239 MARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISA 298
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ L G E+H ++ G + + NAL+ MY +C + A F+ DV +W
Sbjct: 299 SLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTA 358
Query: 570 LLTGYAERGQGALAEEFFRKM 590
L+ Y + G+ A E +++M
Sbjct: 359 LIVAYTQHGRNREALELYKQM 379
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 208/420 (49%), Gaps = 7/420 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N +AL+ M + DE +V + + R G+ LH +
Sbjct: 256 NAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVA 315
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA +SM+ K +L A VF K+ D+ SW LI Y + G EAL L
Sbjct: 316 HGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALEL 375
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITM 241
Y++M G++PD TF VL C DL+ G+ +H ++ + G+ +D +V ALI M
Sbjct: 376 YKQMEG-EGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGF-SDGVLVAALINM 433
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
YVKCG L + +F + + WNAMI+ Y + G + L+ MM++ +DPD T
Sbjct: 434 YVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDEST 493
Query: 301 LSSVISASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
LSS++SA + D + G ++H +I S + V N LI MY S G E + VF RM
Sbjct: 494 LSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 553
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+++DVVSWT +IS Y +A+ Y+ M EG P E T V AC G +D
Sbjct: 554 KNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECK 613
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
Q + + + ++ + S+ +++A ++ H +P + + WTS++ R +
Sbjct: 614 WYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTH 673
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 152/280 (54%), Gaps = 4/280 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR +H +++ G + D + + L++MY G+ ++ +VF + + + SW +I+ +
Sbjct: 5 GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ KA+E ++ M++ G PD T++SVL AC+ L +L+ G K+H A+ GL S II+
Sbjct: 65 NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIV 124
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
N L+ MY++C +D A VF +I K+V+SW ++I + +AL F++M L+
Sbjct: 125 QNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM--ELE 182
Query: 497 PNSVTLVSILSACARI-GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
PN VT S+ +AC+ + GK IH + + + A++ MY + G++ A
Sbjct: 183 PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQ 242
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
FN ++V +WN +L Y + A E + +M+ K
Sbjct: 243 VFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQK 282
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
AL G+ IHAH + G+A DGFL + LL MY +CG + A F+S R + +WN ++
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 573 GYAERGQGALAEEFFRKMIDSKG 595
+A+ G A E FR M DS G
Sbjct: 61 AFAKNRHGRKAIEMFRSM-DSAG 82
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 289/563 (51%), Gaps = 39/563 (6%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
LC G L++A++ L +++ + V+ + ++ C R +++G +H + + +
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ LGN+ ++ + KFGD+ VF +M RD+ +W+ +I YA +A ++RM
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM-K 171
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P+ TF +L+ C L++ +E+H V G E DV V ALITMY KCG++
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +R+ +SW A+I ++ + + L+ M + + P+ +T S++++
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +H ++ + G DV V N LI MY ++ + F RM +DV+SW+
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSA 351
Query: 370 MISCYEGSVLPDKAV--ETYQMME---AEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
MI+ Y S DK E +Q++E EG P+++T S+L AC+ G L+ G ++H
Sbjct: 352 MIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII-LGLRLNNRSFE 483
+ G S + + +MY+KC I +A +VF ++ +KNV++W S++ + ++ + +
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSA 471
Query: 484 ALIFFRKMMLNL-------------------------------KPNSVTLVSILSACARI 512
+F N+ +P+ VT++SIL AC +
Sbjct: 472 EKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGAL 531
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
AL GK +HA A+++G+ D + +L+ MY +CG + A F+ + RD AWN +L
Sbjct: 532 SALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAML 591
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
GY + G G A + F++M+ +
Sbjct: 592 AGYGQHGIGPEAVDLFKRMLKER 614
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 277/554 (50%), Gaps = 45/554 (8%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A + M++ NI + +++++ C ++ +H+VV + V +
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAV 216
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A ++M+ K G++ A +F KM +R++ SW +I A+ +EA LY++M G
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ-AG 275
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ TF +L +C L RG+ +H H+ G E DV V NALITMY KC + AR
Sbjct: 276 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDAR 335
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKG-----LMLFIMMREVLVDPDFMTLSSVISA 307
FD M KRD ISW+AMI+GY ++G K L MR V P+ +T S++ A
Sbjct: 336 ETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKA 395
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ G + GR++H + K+GF D S+ + MY G+ E E+VFS+ME+K+VV+W
Sbjct: 396 CSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAW 455
Query: 368 TT-------------------------------MISCYEGSVLPDKAVETYQMMEAEGSM 396
+ MI+ Y S K E M+ EG
Sbjct: 456 ASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQ 515
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +TI S+L AC L L+ G +H A++ GL S ++A +LI MYSKC + +A V
Sbjct: 516 PDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTV 575
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F +I +++ ++W +++ G + EA+ F++M+ + PN +T +++SAC R G +
Sbjct: 576 FDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLV 635
Query: 516 MCGKEIH---AHALRIGVAFDGFLPNALLDMYVRCGRMKPA--WNQFNSNERDVSAWNIL 570
G+EI R+ + ++D+ R GR++ A + Q E D+S W+ L
Sbjct: 636 QEGREIFRIMQEDFRMKPGKQHY--GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693
Query: 571 LTGYAERGQGALAE 584
L LAE
Sbjct: 694 LGACKSHDNVQLAE 707
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 224/473 (47%), Gaps = 46/473 (9%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L +A + + M + I + V+L+ C + G +HS +S+ V + NA
Sbjct: 261 LNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANA 320
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-----FDEALSLYQRMFWV 190
++M+ K + A F +M RD+ SW+ +I GYA++G+ DE L +RM
Sbjct: 321 LITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR- 379
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA------------- 237
GV P+ TF +L+ C L++G+++H + + G+E+D + A
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYE 439
Query: 238 ------------------LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
L+TMY+KCGDL A VF M R+ +SWN MI+GY ++G+
Sbjct: 440 AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDI 499
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
K L M+ PD +T+ S++ A + + G+ VH +K+G D V L
Sbjct: 500 AKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSL 559
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I MY G E VF ++ ++D V+W M++ Y + +AV+ ++ M E P+E
Sbjct: 560 IGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNE 619
Query: 400 ITIASVLSACACLGNLDLGIKLHQL-----AMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
IT +V+SAC G + G ++ ++ M+ G Y ++D+ + + +A
Sbjct: 620 ITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHY----GCMVDLLGRAGRLQEAE 675
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
E ++P + IS +LG ++ + + + +L L+P++ ++ LS
Sbjct: 676 EFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLS 728
>gi|147773389|emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 256/444 (57%), Gaps = 12/444 (2%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
F WN LI GY+ AG L +Y +M +G V+PD +TFP VL+ C ++++G+EVH
Sbjct: 8 FLWNTLIRGYSIAGV-GGGLEVYNQMVRIG-VRPDDHTFPFVLKACADAFEVRKGREVHG 65
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V++ G+E+DV V N L++ Y CG L A VFD MP++D +SWN MI + NG + +
Sbjct: 66 XVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGCWXE 125
Query: 282 GLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L LF MR + P+ +++ SV+ V DE E+HGYV+K+G V V N L+
Sbjct: 126 VLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALL 185
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+Y GN ++VF M K++VSW +I+ + A++ +++M EG P+ I
Sbjct: 186 DVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSI 245
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI+S L L G ++H ++R GL S I IAN+LIDMY+K +A VF+++
Sbjct: 246 TISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKL 305
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
KNV+SW ++I N A+ R+M PNSVT ++L ACAR+G + GK
Sbjct: 306 DAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGK 365
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQ 579
EIHA ++ +G AFD F+ NAL DMY + G +K A N F+++ RD ++NIL+ G ++
Sbjct: 366 EIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGXSQTSD 425
Query: 580 GALAEEFFRKMIDSKGNWRKLMGL 603
+ + F +M +LMGL
Sbjct: 426 CSESLSLFSEM--------QLMGL 441
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 270/503 (53%), Gaps = 3/503 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
L+ + M + + D+ +++ C +G +H V K V +GN LS
Sbjct: 25 GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVVKLGFESDVFVGNTLLS 84
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ G L A VF +M ++DL SWN +IG ++ G + E L L+ M G++P+V
Sbjct: 85 FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVV 144
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+ VL C GV D E+H +V++ G E V V NAL+ +Y KCG++ + VF M
Sbjct: 145 SVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALLDVYGKCGNVAALKQVFGEM 204
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ +SWNA+I+ + G Y L +F +M + + P+ +T+SS + + K GR
Sbjct: 205 VEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGR 264
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
EVHG I+MG D+ + N LI MY G+ E VF ++++K+VVSW MI+ + +
Sbjct: 265 EVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNR 324
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
AV + M+ G +P+ +T +VL ACA +G + G ++H ++ G + ++N
Sbjct: 325 FELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSN 384
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
L DMY+K + A VF ++ +S+ +I+G + E+L F +M ++ LK
Sbjct: 385 ALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQ 443
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++V+ + LSACA + A+ GKEIH LR F+ N+LLD Y +CGR+ A N F
Sbjct: 444 DNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIF 503
Query: 558 NS-NERDVSAWNILLTGYAERGQ 579
+ +DV++WN ++ GY G+
Sbjct: 504 DRMTNKDVASWNTMILGYGMLGE 526
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
++L MQ + + D + + + C +G +H + + + H+ + + N+ L
Sbjct: 428 ESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLL 487
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP-D 196
+ K G +G A +F +M ++D+ SWN +I GY G D A+ L V+ D
Sbjct: 488 DFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLLTENMRKDDVESDD 547
Query: 197 VYTFPCVLRTC 207
+F VL C
Sbjct: 548 SVSFIAVLSAC 558
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 259/481 (53%), Gaps = 9/481 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+++ S+ + ++++ GD+ + F ++ +D+++WN +I Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F EA+ + ++ V ++PD YTFP VL+ CG + D G+++H + G++ +V V
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 254
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI MY + G AR +FD MP RD SWNAMISG +NG + L + MR +
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+F+T+ S++ +GD +H YVIK G D+ V N LI MY FGN E+ K F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M DVVSW ++I+ YE + P A + M+ G PD +T+ S+ S A +
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434
Query: 417 LGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+H MR G L+ ++I N ++DMY+K +D A +VF IP K+VISW ++I G
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494
Query: 476 RLNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N + EA+ + KMM K PN T VSIL A A +GAL G +IH ++ +
Sbjct: 495 AQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 553
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMI 591
D F+ L+D+Y +CGR+ A + F ++ S WN +++ + G + F +M+
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613
Query: 592 D 592
D
Sbjct: 614 D 614
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 245/464 (52%), Gaps = 6/464 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H K +V + + + M+ +FG G A +F M RD+ SWN +I G
Sbjct: 233 DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +AL + M + G+K + T +L C + D+ +H++VI+ G E D+
Sbjct: 293 QNGNAAQALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY K G+L AR F M D +SWN++I+ Y +N + + F+ M+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREE 351
PD +TL S+ S D K R VHG++++ G+ +DV + N ++ MY G +
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM-EAEGSMPDEITIASVLSACA 410
KVF + KDV+SW T+I+ Y + L +A+E Y+MM E + +P++ T S+L A A
Sbjct: 472 AHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 531
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+G L G+K+H ++T L + +A LID+Y KC + A+ +F+Q+P ++ ++W +
Sbjct: 532 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 591
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II ++ + + L F +M+ +KP+ VT VS+LSAC+ G + GK G
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G ++ A++ + D S W LL
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 695
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 203/399 (50%), Gaps = 13/399 (3%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K +H ++ G + + L+ +Y GD+ +R FD +P++D +WN+MIS Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 276 NGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
NG + + + F + V + PDF T V+ A + D GR++H + K+GF +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 251
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V LI MY FG +F M +D+ SW MIS + +A++ M EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ +T+ S+L C LG++ + +H ++ GL + ++N LI+MY+K ++ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+ F Q+ +V+SW SII N+ A FF KM LN +P+ +TLVS+ S A+
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 514 ALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
+ +H +R G + D + NA++DMY + G + A F +DV +WN L+
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491
Query: 572 TGYAERGQGALAEEFFRKM------IDSKGNWRKLMGLF 604
TGYA+ G + A E ++ M I ++G W ++ +
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 205/418 (49%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L NG+ QAL LD M+ I ++ +V+++ +C + +H V K
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK 344
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA ++M+ KFG+L A F +M D+ SWN +I Y + A
Sbjct: 345 HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGF 404
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMY 242
+ +M + G +PD+ T + D K + VH ++R G+ DV + NA++ MY
Sbjct: 405 FVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G L A VF+ +P +D ISWN +I+GY +NG + + ++ MM E + P+ T
Sbjct: 464 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A VG + G ++HG VIK DV V LI +Y G + +F ++
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V+W +ISC+ +K ++ + M EG PD +T S+LSAC+ G ++ G
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+L G+ + ++D+ + ++ A + +P + W +++ R++
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 701
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 255/455 (56%), Gaps = 9/455 (1%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F +M D F WNV+I G+ G + EA+ Y RM + GVK D +T+P V+++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSVA 141
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
G+ L+ GK++H VI+ G+ +DV V N+LI++Y+K G A VF+ MP+RD +SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MISGY G+ LMLF M + PD + S + A V K+G+E+H + ++
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 329 F-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
+ DV V ++ MY +G E++F+ M +++V+W MI CY + A +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 388 QMM-EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
Q M E G PD IT ++L A A L G +H AMR G + ++++ LIDMY +
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C + A +F ++ +KNVISW SII N +++ AL F+++ +L P+S T+ SI
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDV 564
L A A +L G+EIHA+ ++ + + N+L+ MY CG ++ A FN +DV
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+WN ++ YA G G ++ F +MI S+ N K
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 222/412 (53%), Gaps = 8/412 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+EG +H++V K V + N+ +S+++K G A VF +M +RD+ SWN +I GY
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-A 230
G +L L++ M G KPD ++ L C V K GKE+H H +R E
Sbjct: 207 LALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V+ +++ MY K G++ A +F+GM +R+ ++WN MI Y NG + F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 291 EVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E + PD +T +++ AS ++ GR +HGY ++ GF + + LI MY G
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ E +F RM K+V+SW ++I+ Y + A+E +Q + +PD TIAS+L A
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A +L G ++H +++ S II N+L+ MY+ C ++ A + F+ I K+V+SW
Sbjct: 442 AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWN 501
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
SII+ ++ ++ F +M+ + + PN T S+L+AC+ G + G E
Sbjct: 502 SIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 133/249 (53%), Gaps = 3/249 (1%)
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E+ ++F M D W MI + L +AV+ Y M G D T V+ +
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A + +L+ G K+H + ++ G +S + + N+LI +Y K C A +VF ++P+++++SW
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I G F +L+ F++M+ KP+ + +S L AC+ + + GKEIH HA+R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 529 GVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEF 586
+ D + ++LDMY + G + A FN +R++ AWN+++ YA G+ A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 587 FRKMIDSKG 595
F+KM + G
Sbjct: 321 FQKMSEQNG 329
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG AL+ + + ++ D + +++ EG +H+ + K
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N+ + M+ GDL A F + +D+ SWN +I YA GF ++ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
+ M V P+ TF +L C + G E + R +G + ++ ++ +
Sbjct: 520 FSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 243 VKCGDLVRARLVFDGMP 259
+ G+ A+ + MP
Sbjct: 579 GRTGNFSAAKRFLEEMP 595
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 277/526 (52%), Gaps = 13/526 (2%)
Query: 69 ELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+ C S A KYLD ++ +E ++ R+ + LH+++ +
Sbjct: 20 QACSLYSATAAPKYLDGVE------NEKREIDFNRIFLYCTKVHLAKQLHALLVVSGKTQ 73
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S+ L ++ + GD+ HA F ++ +D+++WN +I YA+ G F A+ +
Sbjct: 74 SIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFL 133
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
++ D YTFP V+R CG + D G++VH V++ G+E DV + + I Y + G +
Sbjct: 134 STSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFV 190
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A +FD M RD +WNAMISG++ NG+ + L +F MR V D +T+SS++
Sbjct: 191 SLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPIC 250
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D G +H Y IK+G D+ VCN LI MY FG E +F++M+ +D+VSW
Sbjct: 251 VQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWN 310
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-R 427
++++ +E + P A+ Y M + G +PD +T+ S+ S A LGN +H R
Sbjct: 311 SLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRR 370
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ I + N +IDMY+K ID A +VF +P K+VISW S+I G N + EA+
Sbjct: 371 CWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDV 430
Query: 488 FRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+ M PN T VSIL+A +++GAL G + H ++ + FD F+ L+DMY
Sbjct: 431 YSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYG 490
Query: 546 RCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKM 590
+CG++ A + F S +WN +++ + G G A + F++M
Sbjct: 491 KCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEM 536
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 254/471 (53%), Gaps = 17/471 (3%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D+G +H +V K V + +F+ + +FG + A +F M RD+ +WN +I G+
Sbjct: 156 DDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGF 215
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
G EAL ++ M + V D T +L C + D+ G +HV+ I+ G E D
Sbjct: 216 YLNGKVAEALEVFDEMRF-KSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ V NALI MY K G+L A +F+ M RD +SWN++++ + +N + + L ++ M
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHS 334
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNRE 350
+ V PD +TL S+ S + +G+ R +HG+V + F D+++ N +I MY G +
Sbjct: 335 IGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFID 394
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA-EGSMPDEITIASVLSAC 409
KVF + KDV+SW ++I+ Y + L ++A++ Y M G++P++ T S+L+A
Sbjct: 395 SARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAH 454
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ LG L G+K H ++ L I ++ L+DMY KC + AL +F+++P ++ +SW
Sbjct: 455 SQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWN 514
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-----HA 523
+II L+ +A+ F++M +KP+ +T VS+LSAC+ G + G+
Sbjct: 515 AIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQET 574
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILL 571
+ +R + G ++D++ R G ++ A+N F N DVS W LL
Sbjct: 575 YGIRPSLKHYG----CMVDLFGRAGHLEKAFN-FVKNMPVRPDVSVWGALL 620
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 248/511 (48%), Gaps = 9/511 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG + +AL+ D M+ ++ +D + +L+ +C G+ +H K
Sbjct: 209 NAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIK 268
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA ++M+ KFG+L A +F +M RD+ SWN L+ + + AL +
Sbjct: 269 LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGV 328
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMY 242
Y +M + GV PD+ T + + + + +H V R + D+ + NA+I MY
Sbjct: 329 YNKMHSI-GVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMY 387
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G + AR VF+G+P +D ISWN++I+GY +NG + + ++ MR P+ T
Sbjct: 388 AKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTW 447
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+++A +G K G + HG +IK D+ V L+ MY G + +F +
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH 507
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ VSW +ISC+ KAV+ ++ M++EG PD IT S+LSAC+ G +D G
Sbjct: 508 QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWC 567
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
QL T G+ + ++D++ + ++KA +P + +S +LG +
Sbjct: 568 FQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHE 627
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSAC-ARIGALMCGKEIHAHA----LRIGVAFDGF 535
+ E + +L ++ +V +LS A++G E+ + A L+ +
Sbjct: 628 NVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSNERDVSA 566
+ +D++ + P + S R+++A
Sbjct: 688 EVDKKIDVFYTGNQTHPKCEEIYSELRNLTA 718
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 257/456 (56%), Gaps = 18/456 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L FV+ G +G+A +F KM D F WNV+I GY G F EA+ Y RM G++ D
Sbjct: 65 LCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRM-ECEGIRSD 123
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+TFP V++ CG + L G++VH +I+ G++ DV V N LI MY+K G + A VFD
Sbjct: 124 NFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFD 183
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP RD +SWN+M+SGY +G+ + LM F M + D + S + A + +
Sbjct: 184 EMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRS 243
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G E+H VI+ D+ V LI MY G + E+VF+R+ SK++V+W MI
Sbjct: 244 GMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIG---- 299
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
M E + +PD IT+ ++L +C+ G L G +H A+R + Y+++
Sbjct: 300 -----------GMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVL 348
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
L+DMY KC + A VF+Q+ +KN++SW +++ N + EAL F+ ++ L
Sbjct: 349 ETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPL 408
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+++T+ S+L A A + + GK+IH++ +++G+ + F+ NA++ MY +CG ++ A
Sbjct: 409 KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTARE 468
Query: 556 QFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +DV +WN ++ YA G G + +FF +M
Sbjct: 469 FFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEM 504
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 222/444 (50%), Gaps = 17/444 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++A+ + M+ I D +++ C G +H + K L V +
Sbjct: 102 NGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYV 161
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N + M++K G + A VF +M RDL SWN ++ GY G +L ++ M +G
Sbjct: 162 CNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGN 221
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K D + L C L+ G E+H VIR E D+ V +LI MY KCG + A
Sbjct: 222 -KADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAE 280
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + ++ ++WNAMI G E+ + V PD +T+ +++ + G
Sbjct: 281 RVFNRIYSKNIVAWNAMIGGMQEDDK---------------VIPDVITMINLLPSCSQSG 325
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+ +HG+ I+ F + + L+ MY G + E VF++M K++VSW TM++
Sbjct: 326 ALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVA 385
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A++ +Q + E PD ITIASVL A A L + G ++H M+ GL S
Sbjct: 386 AYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGS 445
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I+N ++ MY+KC + A E F + K+V+SW ++I+ ++ ++ FF +M
Sbjct: 446 NTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMR 505
Query: 493 -LNLKPNSVTLVSILSACARIGAL 515
KPN T VS+L+AC+ G +
Sbjct: 506 GKGFKPNGSTFVSLLTACSISGLI 529
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 191/352 (54%), Gaps = 15/352 (4%)
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+V+ G + A +F+ M D WN +I GY NG + + + + M + D T
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
VI A + +G++VHG +IK+GF DV VCN LI MYL G E EKVF M
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+VSW +M+S Y+ ++ ++ M G+ D + S L AC+ L G+++
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R+ L I++ +LIDMY KC +D A VF++I KN+++W ++I G++ +++
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKV 307
Query: 482 FEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
P+ +T++++L +C++ GAL+ GK IH A+R L AL+
Sbjct: 308 I--------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALV 353
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
DMY +CG +K A + FN NE+++ +WN ++ Y + Q A + F+ +++
Sbjct: 354 DMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 215/448 (47%), Gaps = 23/448 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ ++G +L M L D +++ + C + G+ +H V +
Sbjct: 194 NSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR 253
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L + + + + M+ K G + +A VF ++ +++ +WN +IGG + D+
Sbjct: 254 SELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE----DDK--- 306
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
V PDV T +L +C L GK +H IR + + + AL+ MY
Sbjct: 307 ---------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYG 357
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L A VF+ M +++ +SWN M++ Y +N +Y + L +F + + PD +T++S
Sbjct: 358 KCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIAS 417
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + G+++H Y++K+G + + N ++ MY G+ + + F M KD
Sbjct: 418 VLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKD 477
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VVSW TMI Y +++ + M +G P+ T S+L+AC+ G +D G +
Sbjct: 478 VVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFN 537
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKA---LEVFHQIPDKNVISWTSIILGLRLNN 479
+ + G+ I ++D+ + +D+A +E +P + W S++ R +N
Sbjct: 538 SMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARI--WGSLLAASRNHN 595
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILS 507
A + R +L+LK ++ +LS
Sbjct: 596 DVVLAELAARH-ILSLKHDNTGCYVLLS 622
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 269/480 (56%), Gaps = 4/480 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N +++ K + +A VF KM ++L +W+ ++ Y++ G+ +EAL ++ +
Sbjct: 86 LANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKS 145
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ + V+R C + +++G ++H V+R G++ DV V +LI Y K G++ A
Sbjct: 146 GEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA 205
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RLVFD + ++ ++W +I+GY + G L LF MRE V PD +SSV+SA ++
Sbjct: 206 RLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSML 265
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++H YV++ G DVSV N LI Y + G K+F +M K+++SWTTMI
Sbjct: 266 EFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMI 325
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + +A++ + M G PD SVL++C L+ G ++H ++ L
Sbjct: 326 SGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLE 385
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + N LIDMY+K + A +VF + ++NVIS+ ++I G + EAL F +M
Sbjct: 386 SDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 445
Query: 492 MLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L KPN T ++++A + + +L G++ H +++G+ F F+ NAL+DMY +CG +
Sbjct: 446 RVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSI 505
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A FNS+ RDV WN +++ +A+ G+ A FR+M+ + N+ + + C
Sbjct: 506 EEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 565
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 231/448 (51%), Gaps = 3/448 (0%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
G E+AL ++D ++ +E L +++R C ++G LH V ++ V
Sbjct: 128 QGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 187
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G + + + K G++ A VF ++ ++ +W +I GY K G +L L+ +M
Sbjct: 188 VGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRET- 246
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V PD Y VL C + L+ GK++H +V+R G E DV VVN LI Y KC +
Sbjct: 247 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 306
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD M ++ ISW MISGY +N + + LF M + PD +SV+++
Sbjct: 307 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 366
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR+VH Y IK D V N LI MY + +KVF M ++V+S+ MI
Sbjct: 367 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y +A+E + M P+E T A++++A + L +L G + H ++ GL
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 486
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N L+DMY+KC I++A ++F+ ++V+ W S+I + + EAL FR+M
Sbjct: 487 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 546
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCG 518
M ++PN VT V++LSAC+ G + G
Sbjct: 547 MKEGIQPNYVTFVAVLSACSHAGRVEDG 574
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 220/404 (54%), Gaps = 3/404 (0%)
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ ++P F +L+ + K +H +I G ++D + N LI + K +
Sbjct: 42 IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 101
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR+VFD MP ++ I+W++M+S Y + G + LM+F+ + R+ P+ L+SVI A
Sbjct: 102 NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 161
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G + G ++HG+V++ GF DV V LI Y GN EE VF ++ K V+WT
Sbjct: 162 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 221
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T+I+ Y ++E + M +PD ++SVLSAC+ L L+ G ++H +R
Sbjct: 222 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + + N LID Y+KC + ++F Q+ KN+ISWT++I G N+ +EA+ F
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M L KP+ S+L++C AL G+++HA+ ++ + D F+ N L+DMY +
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 401
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+ E++V ++N ++ GY+ + + + A E F +M
Sbjct: 402 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 445
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ M+E N+ D + +++ C + G +H+ V + + + V + N +
Sbjct: 236 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 295
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ K + +F +M +++ SW +I GY + F EA+ L+ M +G KPD +
Sbjct: 296 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW-KPDGF 354
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VL +CG L++G++VH + I+ E+D V N LI MY K L+ A+ VFD M
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 414
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ IS+NAMI GY + + L LF MR L P+ T +++I+A+ + + G+
Sbjct: 415 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQ 474
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+ H ++KMG V N L+ MY G+ EE K+F+ +DVV W +MIS +
Sbjct: 475 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 534
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK----LHQLAMRTGLISYI 434
++A+ ++ M EG P+ +T +VLSAC+ G ++ G+ + ++ G Y
Sbjct: 535 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYA 594
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + + + + +A E ++P + I W S++ R+
Sbjct: 595 CV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 634
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 138/358 (38%), Gaps = 75/358 (20%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K M L D A +++ C + ++G +H+ K + N +
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K L A VF M ++++ S+N +I GY+ EAL L+ M V KP+
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM-RVRLQKPNE 454
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE---------------------------- 229
+TF ++ + L+ G++ H +++ G +
Sbjct: 455 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514
Query: 230 ---ADVDVVNALITMYVKCGDLVRARLVFDGMPKR----DRISWNAMISGYFENGEYMKG 282
DV N++I+ + + G+ A +F M K + +++ A++S G G
Sbjct: 515 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574
Query: 283 LMLFIMM--------------------------------REVLVDPDFMTLSSVISASEL 310
L F M ++ ++P + S++SA +
Sbjct: 575 LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 634
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLI---KMYLSFGNREEGEKVFSRMESKDVV 365
G+ +LG+ Y +M S D I ++ S G + +KV RM+S +VV
Sbjct: 635 AGNVELGK----YAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 688
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 279/525 (53%), Gaps = 3/525 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L G ++ MQ I +E L ++ C D G +H+ K L
Sbjct: 188 LVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLD 247
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ +G+A + ++ K G++ A +F M +++ +WNVL+ GYA+ G L L+ M
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ VK + +T VL+ C +LK+G+ +H +I+ GYE + + L+ MY KCG +
Sbjct: 308 LD-VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF + K D + W+A+I+ + G+ + + LF +MR P+ T+ S++SA+
Sbjct: 367 DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G+ + G+ +H V K GF DV+V N L+ MY+ G +G K++ M +D++SW
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+S + D+ + + M EG +P+ T S+L +C+CL ++ G ++H ++
Sbjct: 487 YLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ 546
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L + LIDMY+KC ++ A F+++ +++ +WT II N+ +AL +FR
Sbjct: 547 LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M +KPN TL LS C+ + +L G+++H+ + G D F+ +AL+DMY +CG
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
M+ A F + RD AWN ++ GYA+ GQG A FR M+D
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 283/553 (51%), Gaps = 26/553 (4%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K +++ N++C S ++ LKY SM +R C KR +H +
Sbjct: 95 KTEDAKGNQVCW--SSKKKLKYYSSM---------------LRECASKRSLGVAKAIHGL 137
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ K + + L + ++++ K +A V KM DRD+ SW LI G GF +++
Sbjct: 138 IVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDS 197
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+Q M G+ P+ +T L+ C L GK++H + G D+ V +AL+
Sbjct: 198 IYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVD 256
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y KCG++ A +F GMP+++ ++WN +++GY + G+ L LF M E+ V + T
Sbjct: 257 LYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFT 316
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L++V+ + K G+ +H +IK G+ + + L+ MY G + VF ++
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D+V W+ +I+C + +++++ + +M ++P++ TI S+LSA GNL G
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---L 477
+H + G + + ++N L+ MY K C+ +++ + D+++ISW + + GL +
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+R IF+ + PN T +SIL +C+ + + G+++HAH ++ + + F+
Sbjct: 497 YDRPLT--IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC 554
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--K 594
AL+DMY +C ++ A FN + RD+ W +++T YA+ QG A +FR+M K
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614
Query: 595 GNWRKLMGLFRKC 607
N L G C
Sbjct: 615 PNEFTLAGCLSGC 627
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 247/459 (53%), Gaps = 4/459 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN G + LK SM EL++ +E L +++ C + +G +HS++ K
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K G A VF + D+ W+ LI + G +E++ L
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +G P+ YT +L +L+ G+ +H V ++G+E DV V NAL+TMY+
Sbjct: 403 FHLM-RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + +++ M RD ISWNA +SG + G Y + L +F M E P+ T S
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + D GR+VH ++IK D+ VC LI MY E+ + F+R+ +D
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ +WT +I+ Y + +KA+ ++ M+ EG P+E T+A LS C+ L +L+ G +LH
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS 641
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++G +S + + + L+DMY+KC C+++A +F + ++ I+W +II G N + +
Sbjct: 642 MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK 701
Query: 484 ALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKE 520
AL FR MML+ + P+ VT ILSAC+ G + GKE
Sbjct: 702 ALTAFR-MMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 279/525 (53%), Gaps = 3/525 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L G ++ MQ I +E L ++ C D G +H+ K L
Sbjct: 188 LVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLD 247
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ +G+A + ++ K G++ A +F M +++ +WNVL+ GYA+ G L L+ M
Sbjct: 248 LFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME 307
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ VK + +T VL+ C +LK+G+ +H +I+ GYE + + L+ MY KCG +
Sbjct: 308 LD-VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF + K D + W+A+I+ + G+ + + LF +MR P+ T+ S++SA+
Sbjct: 367 DAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G+ + G+ +H V K GF DV+V N L+ MY+ G +G K++ M +D++SW
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNA 486
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+S + D+ + + M EG +P+ T S+L +C+CL ++ G ++H ++
Sbjct: 487 YLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ 546
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L + LIDMY+KC ++ A F+++ +++ +WT II N+ +AL +FR
Sbjct: 547 LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFR 606
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M +KPN TL LS C+ + +L G+++H+ + G D F+ +AL+DMY +CG
Sbjct: 607 QMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
M+ A F + RD AWN ++ GYA+ GQG A FR M+D
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 283/553 (51%), Gaps = 26/553 (4%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K +++ N++C S ++ LKY SM +R C KR +H +
Sbjct: 95 KTEDAKGNQVCW--SSKKKLKYYSSM---------------LRECASKRSLGVAKAIHGL 137
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ K + + L + ++++ K +A V KM DRD+ SW LI G GF +++
Sbjct: 138 IVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDS 197
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+Q M G+ P+ +T L+ C L GK++H + G D+ V +AL+
Sbjct: 198 IYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVD 256
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y KCG++ A +F GMP+++ ++WN +++GY + G+ L LF M E+ V + T
Sbjct: 257 LYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFT 316
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L++V+ + K G+ +H +IK G+ + + L+ MY G + VF ++
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D+V W+ +I+C + +++++ + +M ++P++ TI S+LSA GNL G
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---L 477
+H + G + + ++N L+ MY K C+ +++ + D+++ISW + + GL +
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+R IF+ + PN T +SIL +C+ + + G+++HAH ++ + + F+
Sbjct: 497 YDRPLT--IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC 554
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--K 594
AL+DMY +C ++ A FN + RD+ W +++T YA+ QG A +FR+M K
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614
Query: 595 GNWRKLMGLFRKC 607
N L G C
Sbjct: 615 PNEFTLAGCLSGC 627
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 247/459 (53%), Gaps = 4/459 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN G + LK SM EL++ +E L +++ C + +G +HS++ K
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K G A VF + D+ W+ LI + G +E++ L
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +G P+ YT +L +L+ G+ +H V ++G+E DV V NAL+TMY+
Sbjct: 403 FHLM-RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + +++ M RD ISWNA +SG + G Y + L +F M E P+ T S
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFIS 521
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + D GR+VH ++IK D+ VC LI MY E+ + F+R+ +D
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRD 581
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ +WT +I+ Y + +KA+ ++ M+ EG P+E T+A LS C+ L +L+ G +LH
Sbjct: 582 LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS 641
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++G +S + + + L+DMY+KC C+++A +F + ++ I+W +II G N + +
Sbjct: 642 MVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNK 701
Query: 484 ALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKE 520
AL FR MML+ + P+ VT ILSAC+ G + GKE
Sbjct: 702 ALTAFR-MMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 248/430 (57%), Gaps = 5/430 (1%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ +A +F +M RD+F WN LI GYA AG +EAL+LY M G+ PD YTFP V+R
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHG-AGLFPDNYTFPFVVR 136
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+C + L+ GKEVH ++++ G+++DV V ++L+ MY + G+ + LVF M R+ +S
Sbjct: 137 SCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS 196
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
W A+I+GY +N + +GL +F M P+ +TL SV+ A + LG+ +HGY I
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K+G DVS+ N LI +Y GN E +F M +++VSW MI+ YE + AV+
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
++ M+AE D IT+ SV+SACA LG L+ G +H+L R GL + I N LIDMY+
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYA 376
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
KC ID A EVF ++P ++V+SWTS+I + +AL F +M +KPNS T +
Sbjct: 377 KCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 436
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-LLDMYVRCGRMKPAWNQFNSN--E 561
+ +AC G + G++ +R G A ++D+ R G + A+ + E
Sbjct: 437 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 496
Query: 562 RDVSAWNILL 571
DVS W LL
Sbjct: 497 PDVSVWGALL 506
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 226/437 (51%), Gaps = 6/437 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL +M + D +VR C EG +H + K V +
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQ 166
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
++ ++M+ + G+ VFG+M R++ SW +I GY + +F E L +++ M VG G
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREM--VGSG 224
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P+ T VL C G+ L GK +H + I+ G + DV + NALI +Y KCG++ AR
Sbjct: 225 TQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETAR 284
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FDGM ++ +SWNAMI+ Y +N + LF M+ VD D++T+ SVISA +G
Sbjct: 285 SLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLG 344
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H V + G +VS+ N LI MY GN + +VF R+ + VVSWT+MI
Sbjct: 345 ALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLI 431
+ A++ + M+ EG P+ T A+V +AC G ++ G K + MR ++
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ ++D+ + + +A E ++P + +V W +++ R+++ A + K
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEK 524
Query: 491 MMLNLKPNSVTLVSILS 507
+ L L P +VT ++S
Sbjct: 525 LFL-LDPQTVTFYVLMS 540
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 211/415 (50%), Gaps = 8/415 (1%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI-TMYVKCGDLVRARLVFDG 257
+F +L C +PDL R +H V+ G ++ + LI T + AR +FD
Sbjct: 31 SFNYLLNCCSSLPDLSR---IHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MPKRD WN +I GY + G + L L+ M + PD T V+ + ++ + G
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+EVH ++K GF DV V + L+ MY G E VF M +++VSWT +I+ Y +
Sbjct: 148 KEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQN 207
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ + ++ M G+ P+ +T+ SVL ACA L L+LG +H ++ G+ + +
Sbjct: 208 RYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLT 267
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N LI +Y KC ++ A +F + +N++SW ++I NN A+ FR+M +
Sbjct: 268 NALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVD 327
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ +T+VS++SACA +GAL G+ +H R G+ + + NAL+DMY +CG + A
Sbjct: 328 FDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREV 387
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
F R V +W ++ A G G A + F +M D K N +F C+
Sbjct: 388 FERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR 442
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + A+K MQ + D +V+++ C + G ++H +V + ++V +
Sbjct: 308 NNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSI 367
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K G++ A VF ++ R + SW +IG A G ++AL L+ RM G
Sbjct: 368 TNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRM-KDEG 426
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
VKP+ +TF V C ++ G++ ++R + V+ ++ + + G L+ A
Sbjct: 427 VKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEA 486
Query: 252 RLVFDGMPKRDRIS-WNAMI 270
D MP +S W A++
Sbjct: 487 YEFIDKMPVEPDVSVWGALL 506
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 289/556 (51%), Gaps = 8/556 (1%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYL 117
A ++ N + LC +A+K + +Q+ C+ L+ C + R + G +
Sbjct: 26 AEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKI 85
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H + K+ SH + L N L+M+ K G L A VF M +R++ SW +I GY++ G
Sbjct: 86 HDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQG 145
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
AL Y +M GV PD +TF +++ C + D+ G+++H HV++ + A + NA
Sbjct: 146 GNALEFYFQMLQ-SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA 204
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDP 296
LI+MY K ++ A VF M RD ISW +MI+G+ + G ++ L F M+ + + P
Sbjct: 205 LISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLP 264
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ SV SA + + GR++HG IK G DV L MY G VF
Sbjct: 265 NEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVF 324
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
++ D+V+W +I+ + +A+ + M +G +PDEIT+ S+L AC L
Sbjct: 325 YQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELY 384
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGL 475
G+++H + GL + + NTL+ MY+KC + A+ F ++ + +++SW +I+
Sbjct: 385 QGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTAC 444
Query: 476 RLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
++++ E + M ++ +P+ +TL ++L A A ++ G ++H +AL+ G+ D
Sbjct: 445 MHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDI 504
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM--I 591
+ N L+D+Y +CG +K A F+S DV +W+ L+ GYA+ G G A + F+ M +
Sbjct: 505 SVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRL 564
Query: 592 DSKGNWRKLMGLFRKC 607
D K N +G+ C
Sbjct: 565 DVKPNHVTFVGVLTAC 580
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 261/509 (51%), Gaps = 11/509 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL++ M + + D+ ++++ C G LH+ V K+ +
Sbjct: 142 NGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIA 201
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +SM+ K + A VF +M RDL SW +I G+++ G+ EAL ++ M G
Sbjct: 202 QNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV 261
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P+ + F V C + + G+++H I+FG DV +L MY KCG L AR
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VF + + D ++WNA+I+G+ G+ + + F MR + PD +T+ S++ A
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
+ G +VHGY+ KMG DV VCN L+ MY + F M + D+VSW ++
Sbjct: 382 ELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAIL 441
Query: 372 SCYEGSVLPDKAVETY---QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ + D+A E + ++M PD IT+ +VL A A ++++G ++H A++T
Sbjct: 442 T---ACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT 498
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL I + N LID+Y+KC + A ++F + + +V+SW+S+ILG EAL F
Sbjct: 499 GLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLF 558
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVR 546
+ M L++KPN VT V +L+AC+ +G + G +++ + G+ + ++D+ R
Sbjct: 559 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLAR 618
Query: 547 CGRMKPAWNQFN--SNERDVSAWNILLTG 573
G + A + + + D+ W LL
Sbjct: 619 AGCLNEAEAFIHQMAFDPDIVVWKTLLAA 647
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 287/551 (52%), Gaps = 9/551 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLD-SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS +N +C +AL + ++ +I ++ VNL+ C R G +H +
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ + L N L+M+ K G L A F M R + SW ++I GY++ G ++A+
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Y +M G PD TF +++ C D+ G ++H HVI+ GY+ + NALI+MY
Sbjct: 168 MYIQML-RSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMY 226
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K G + A VF + +D ISW +MI+G+ + G ++ L LF M R+ + P+
Sbjct: 227 TKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIF 286
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV SA + + GR++ G K G +V L MY FG ++ F ++ES
Sbjct: 287 GSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES 346
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D+VSW +I+ S + ++A+ + M G MPD+IT ++L AC L+ G+++
Sbjct: 347 PDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQI 405
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H ++ GL + N+L+ MY+KC + A VF I + N++SW +I+ + +
Sbjct: 406 HSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQ 465
Query: 481 SFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EA F+ M+ + KP+++T+ +IL CA + +L G ++H +++ G+ D + N
Sbjct: 466 PGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNR 525
Query: 540 LLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGN 596
L+DMY +CG +K A F+S + D+ +W+ L+ GYA+ G G A FR M + + N
Sbjct: 526 LIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPN 585
Query: 597 WRKLMGLFRKC 607
+G+ C
Sbjct: 586 EVTYLGVLSAC 596
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 261/532 (49%), Gaps = 23/532 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D+ ++++ C D G LH V K+ + NA +SM+ KFG + HA VF
Sbjct: 180 DQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVF 239
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ +DL SW +I G+ + G+ EAL L++ MF G +P+ + F V C +
Sbjct: 240 TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKP 299
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++ +FG +V +L MY K G L A+ F + D +SWNA+I+
Sbjct: 300 EFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA- 358
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
N + + + F M + + PD +T +++ A G ++H Y+IKMG
Sbjct: 359 LANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVA 418
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+VCN L+ MY N + VF + E+ ++VSW ++S P +A +++M
Sbjct: 419 AVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLF 478
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+ PD ITI ++L CA L +L++G ++H ++++GL+ + ++N LIDMY+KC +
Sbjct: 479 SENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKH 538
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A VF + +++SW+S+I+G EAL FR M L ++PN VT + +LSAC+
Sbjct: 539 ARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSH 598
Query: 512 IGALMCGKEIH-AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
IG + G ++ + +G+ + ++D+ R G + A N + D++ W
Sbjct: 599 IGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWK 658
Query: 569 ILLTGYAERGQGALAEEFFRKMID-----------------SKGNWRKLMGL 603
LL G +AE ++ S GNW+++ L
Sbjct: 659 TLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARL 710
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 227/437 (51%), Gaps = 5/437 (1%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
S N I K + EAL + ++ + T+ ++ C V LK GK +H
Sbjct: 45 LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H+++ + D+ + N ++ MY KCG L AR FD M R +SW MISGY +NG+
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
++++I M PD +T S+I A + GD LG ++HG+VIK G+ + N LI
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALIS 224
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEI 400
MY FG VF+ + +KD++SW +MI+ + +A+ ++ M +G P+E
Sbjct: 225 MYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEF 284
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
SV SAC L + G ++ + + GL + +L DMY+K + A F+QI
Sbjct: 285 IFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQI 344
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
+++SW +II L N+ EA+ FF +M+ + L P+ +T +++L AC L G
Sbjct: 345 ESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGM 403
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAER 577
+IH++ +++G+ + N+LL MY +C + A+N F S ++ +WN +L+ ++
Sbjct: 404 QIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH 463
Query: 578 GQGALAEEFFRKMIDSK 594
Q A F+ M+ S+
Sbjct: 464 KQPGEAFRLFKLMLFSE 480
>gi|255565109|ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537254|gb|EEF38886.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 555
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 272/501 (54%), Gaps = 7/501 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D+ +++ C +G+ +H V K V +GN L + G L A VF
Sbjct: 9 DDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDAKKVF 68
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M +RD+ SWN L+G ++ GF+ +AL L+ M G +P++ T VL C + D
Sbjct: 69 DEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDE 128
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS-- 271
E+H +V++ G ++ V + NAL+ +Y KCG+L +R VFD M +R+ +SWNA+I+
Sbjct: 129 VVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSL 188
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y E+ + L F +M V P+ +T++S++ + LG+E+HG+ ++ G
Sbjct: 189 AYMEHNK--DALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGIES 246
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
DV + N LI MY G+ + VF M K+VVSW M++ + + A+E + M+
Sbjct: 247 DVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQ 306
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G++P+ +T + L ACA +G L G ++H A R G ++N L DMY+KC ++
Sbjct: 307 TDGAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLN 366
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACA 510
A VF+ I ++ +S+ +I+G S E+L F +M ++ ++ + V+ + +++ACA
Sbjct: 367 LARNVFN-ISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACA 425
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNI 569
+ AL G+EIHA +R + F+ N+LLD Y +CG++ A F +E+D ++WN
Sbjct: 426 SLVALKQGEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNT 485
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ G G+ A F M
Sbjct: 486 IILGVGMLGELEAAINLFEAM 506
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 237/420 (56%), Gaps = 4/420 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++PD +TFP VL+ C ++++G E+H V + G++ DV V N L+ Y G L A
Sbjct: 5 GIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASEL 310
+ VFD M +RD +SWN ++ + NG Y+K L LF M P+ +T+ SV+
Sbjct: 65 KKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAA 124
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ DE + E+H YV+K+G V++CN L+ +Y GN + +VF M ++ VSW +
Sbjct: 125 LEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAI 184
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ A+E +++M E P+ +TIAS+L L + DLG ++H ++R G+
Sbjct: 185 ITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGI 244
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + I+N+LIDMY+K +A VFH + +KNV+SW +++ N A+ R+
Sbjct: 245 ESDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQ 304
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + PN VT + L ACAR+G L GKEIHA A R+G FD F+ NAL DMY +CG
Sbjct: 305 MQTDGAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGF 364
Query: 550 MKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+ A N FN + RD ++NIL+ GY++ + + F +M + + + MG+ C
Sbjct: 365 LNLARNVFNISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAAC 424
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 235/465 (50%), Gaps = 10/465 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICV----DEDALVNLVRLCEWKRGYDEGLYLHS 119
N+ L +NG LK LD E+N+ + +V+++ +C +H
Sbjct: 80 NTLLGAFSVNGFY---LKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHC 136
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V K V L NA + ++ K G+L + VF +M +R+ SWN +I A +
Sbjct: 137 YVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKD 196
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
AL + R+ VKP+ T +L + GKE+H +RFG E+DV + N+LI
Sbjct: 197 ALEAF-RLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGIESDVFISNSLI 255
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY K G +A +VF M +++ +SWNAM++ + +N + + L M+ P+ +
Sbjct: 256 DMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPV 315
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T ++ + A +G + G+E+H +MG D V N L MY G VF+ +
Sbjct: 316 TFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLNLARNVFN-I 374
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+D VS+ +I Y + +++ + M G D ++ V++ACA L L G
Sbjct: 375 SLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGE 434
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H L +R L +I IAN+L+D Y+KC ID A ++F++I +K+ SW +IILG+ +
Sbjct: 435 EIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGMLG 494
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
A+ F M + ++ +SV+ +++LSAC+ G + GK+ A
Sbjct: 495 ELEAAINLFEAMREDGVEYDSVSYIAVLSACSHGGLVEKGKKYSA 539
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 33/386 (8%)
Query: 84 DSMQELNICVDEDALVNLVR-------LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
D+++ + ++E+ N V L E + +D G +H + V + N+
Sbjct: 196 DALEAFRLMINEEVKPNSVTIASILPVLVELEH-FDLGKEIHGFSLRFGIESDVFISNSL 254
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G A VF M ++++ SWN ++ +A+ F A+ L ++M G P+
Sbjct: 255 IDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQM-QTDGAIPN 313
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF L C + L+ GKE+H R G D V NAL MY KCG L AR VF+
Sbjct: 314 PVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLNLARNVFN 373
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ RD +S+N +I GY + + L LF+ M V ++ D ++ VI+A + K
Sbjct: 374 -ISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQ 432
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G E+H V++ + + N L+ Y G + K+F R+ KD SW T+I
Sbjct: 433 GEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGM 492
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ A+ ++ M +G D ++ +VLSAC+ G ++ G K
Sbjct: 493 LGELEAAINLFEAMREDGVEYDSVSYIAVLSACSHGGLVEKGKK---------------- 536
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPD 462
YS C+ + K LE Q D
Sbjct: 537 -------YSACRIMIKLLETAIQFED 555
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G PD+ T VL ACA N+ G+++H + G + + NTL+ Y
Sbjct: 1 MVRNGIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGY 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILS 507
+ A +VF ++ +++V+SW +++ +N +AL F +M L +PN VT+VS+L
Sbjct: 61 LSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLP 120
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
CA + + EIH + ++IG+ L NAL+D+Y +CG +K + F+ ER+ +
Sbjct: 121 VCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVS 180
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSK 594
WN ++T A A E FR MI+ +
Sbjct: 181 WNAIITSLAYMEHNKDALEAFRLMINEE 208
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 292/553 (52%), Gaps = 15/553 (2%)
Query: 64 NSR-LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NSR ++ LC G L++AL +++M V D L++ C R ++G +H+ +
Sbjct: 15 NSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAIL 74
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ + L N LSM+ K G L A VF + DR++ SW +I + EA
Sbjct: 75 KSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFK 134
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
Y+ M + G KPD TF +L L+ G++VH+ ++ G E + V +L+ MY
Sbjct: 135 CYETM-KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMY 193
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGD+ +AR++FD +P+++ ++W +I+GY + G+ L L M++ V P+ +T +
Sbjct: 194 AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFA 253
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S++ + G++VH Y+I+ G+ ++ V N LI MY G EE K+FS + +
Sbjct: 254 SILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR 313
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVV+WT M++ Y D+A+ ++ M+ +G PD++T SVL++C+ L G ++H
Sbjct: 314 DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIH 373
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRS 481
Q + G + + + L+ MY+KC +D A VF+Q+ ++NV++WT+II G + R
Sbjct: 374 QQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRC 433
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-- 538
EAL +F +M +KP+ VT S+LSAC +G + G++ H ++ + + +
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYS 492
Query: 539 ALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGY-----AERGQGALAEEFFRKMI 591
+D+ R G ++ A N S S W LL+ ERG+ A AE +
Sbjct: 493 CFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERA-AENVLKLDP 551
Query: 592 DSKGNWRKLMGLF 604
D G + L ++
Sbjct: 552 DDDGAYVALSSIY 564
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 288/556 (51%), Gaps = 8/556 (1%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYL 117
A ++ N + LC +A+K + +Q+ C+ L+ C + R + G +
Sbjct: 26 AEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKI 85
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H + K+ SH + L N L+M+ K L A VF M +R++ SW +I GY++ G
Sbjct: 86 HDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQG 145
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
AL Y +M GV PD +TF +++ C + D+ G+++H HV++ + A + NA
Sbjct: 146 GNALEFYFQMLQ-SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA 204
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDP 296
LI+MY K ++ A VF M RD ISW +MI+G+ + G ++ L F M+ + + P
Sbjct: 205 LISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLP 264
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ SV SA + + GR++HG IK G DV L MY G VF
Sbjct: 265 NEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVF 324
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
++ D+V+W +I+ + +A+ + M +G +PDEIT+ S+L AC L
Sbjct: 325 YQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELY 384
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGL 475
G+++H + GL + + NTL+ MY+KC + A+ F ++ + +++SW +I+
Sbjct: 385 QGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTAC 444
Query: 476 RLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
++++ E + M ++ +P+ +TL ++L A A ++ G ++H +AL+ G+ D
Sbjct: 445 MRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDT 504
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM--I 591
+ N L+D+Y +CG +K A F+S DV +W+ L+ GYA+ G G A + F+ M +
Sbjct: 505 SVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRL 564
Query: 592 DSKGNWRKLMGLFRKC 607
D K N +G+ C
Sbjct: 565 DVKPNHVTFVGVLTAC 580
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 275/556 (49%), Gaps = 28/556 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL++ M + + D+ ++++ C G LH+ V K+ +
Sbjct: 142 NGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIA 201
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +SM+ K + A VF +M RDL SW +I G+++ G+ EAL ++ M G
Sbjct: 202 QNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV 261
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P+ + F V C + + G+++H I+FG DV +L MY KCG L AR
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VF + + D ++WNA+I+G+ G+ + + F MR + PD +T+ S++ A
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
+ G +VHGY+ KMG DV VCN L+ MY + F M + D+VSW ++
Sbjct: 382 ELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAIL 441
Query: 372 SCYEGSVLPDKAVETYQMME---AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ + D+A E +++++ PD IT+ +VL A A ++++G ++H A++T
Sbjct: 442 T---ACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT 498
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL + N LID+Y+KC + A ++F + + +V+SW+S+ILG EAL F
Sbjct: 499 GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLF 558
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVR 546
+ M L++KPN VT V +L+AC+ +G + G +++ + G+A + ++D+ R
Sbjct: 559 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLAR 618
Query: 547 CGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQ---GALAEEFFRK------------ 589
G + A + + + D+ W LL G G A E K
Sbjct: 619 AGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLL 678
Query: 590 --MIDSKGNWRKLMGL 603
+ SKGNW + L
Sbjct: 679 CNIYASKGNWEDVARL 694
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 273/527 (51%), Gaps = 7/527 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A++ M+ +C +E AL +++ + G +H++ T V +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A VF + +R+ SWN L+ Y K +A+ ++ M W
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-S 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P + F CV+ C G ++ G++VH V+R GYE DV NAL+ MYVK G + A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++F+ MP D +SWNA+ISG NG + + L + M+ + P+ LSS++ A
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++HG++IK D + L+ MY ++ KVF M +D++ W +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S D+A + + EG + T+A+VL + A L ++H LA + G I
Sbjct: 377 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI 436
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N LID Y KC C+ A+ VF + ++I+ TS+I L + A+ F +M
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEM 496
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L+P+ L S+L+ACA + A GK++HAH ++ D F NAL+ Y +CG +
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+ A F+S ER V +W+ ++ G A+ G G A E F +M+D N
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 603
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R D G +H++V + V NA + M+VK G + A +F KM D D
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G G A+ L +M G+ P+V+ +L+ C G G+++H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQM-KSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 326
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ ++D + L+ MY K L A VFD M RD I WNA+ISG G +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 386
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ +F +R+ + + TL++V+ ++ + R+VH K+GF D V N LI
Sbjct: 387 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 446
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y + +VF S D+++ T+MI+ + A++ + M +G PD
Sbjct: 447 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++S+L+ACA L + G ++H ++ +S N L+ Y+KC I+ A F +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P++ V+SW+++I GL + AL F +M+ + PN +T+ S+L AC G + K
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 520 E-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++ G+ + ++D+ R G++ A NS + + S W LL
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 681
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 189/375 (50%), Gaps = 8/375 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H ++++ G+ A + N LI+ Y KC AR VFD +P +SW+++++ Y
Sbjct: 23 GAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + F MR V + L V+ + V D +LG +VH + GF DV V
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDAQLGAQVHAMAMATGFGSDVFV 137
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N L+ MY FG ++ +VF S ++ VSW ++S Y + A++ + M G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P E + V++AC N+D G ++H + +R G + AN L+DMY K +D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+F ++PD +V+SW ++I G LN A+ +M + L PN L SIL ACA G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLT 572
A G++IH ++ D ++ L+DMY + + A F+ + RD+ WN L++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 573 GYAERGQGALAEEFF 587
G + G+ A F
Sbjct: 378 GCSHGGRHDEAFSIF 392
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 194/417 (46%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG +A++ L M+ + + L ++++ C +D G +H + K
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK 331
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K L A VF M RDL WN LI G + G DEA S+
Sbjct: 332 ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSI 391
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + G+ + T VL++ + ++VH + G+ D VVN LI Y
Sbjct: 392 FYGL-RKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYW 450
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC L A VF+ D I+ +MI+ + + LF+ M ++PD LSS
Sbjct: 451 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + + G++VH ++IK F D N L+ Y G+ E+ E FS + +
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VVSW+ MI +A+E + M EG P+ IT+ SVL AC G +D + +
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ G+ + +ID+ + +D A+E+ + +P N W +++ R++
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 37/279 (13%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +H ++K GF S+ N LI Y +VF + VSW+++++ Y
Sbjct: 23 GAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ LP A++ + M AEG +E + VL C+ + LG ++H +AM TG S + +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFV 137
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
AN L+ MY +D A VF + ++N +SW ++ N++ +A+ F +M+ +
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P +++AC + G+++HA +R+G D F NAL+DM
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM----------- 246
Query: 555 NQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
Y + G+ +A F KM DS
Sbjct: 247 -------------------YVKMGRVDIASVIFEKMPDS 266
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 294/572 (51%), Gaps = 13/572 (2%)
Query: 32 FKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQE--- 88
F P S + + L+ N+S+ + + +LC +G+L++AL +L +
Sbjct: 39 FTPIASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVV 98
Query: 89 LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLG 147
L+ +A+ L++ C ++ + G LH +VS + + L ++M+ G
Sbjct: 99 LDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPS 158
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
+ VF K+ ++LF WN ++ Y + F++A+S++ + V KPD +T PCV++ C
Sbjct: 159 DSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC 218
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA-RLVFDGMPKRDRISW 266
G+ DL G+ +H + +DV V NALI MY KCG + A + VFD M + SW
Sbjct: 219 AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSW 278
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
NA++ GY +N + K L L++ M + +DPD+ T+ S++ A + G E+HG+ ++
Sbjct: 279 NALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR 338
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G + D + L+ +Y+ G + +F ME + +VSW MI+ Y + LPD+A+
Sbjct: 339 NGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINL 398
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
++ M ++G P EI I V AC+ L L LG +LH A++ L I +++++IDMY+K
Sbjct: 399 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 458
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
CI + +F ++ +K+V SW II G ++ R EAL F KM+ L LKP+ T I
Sbjct: 459 GGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 518
Query: 506 LSACARIGALMCGKEIHAHAL---RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--N 560
L AC+ G + G E L I + + ++DM R GR+ A
Sbjct: 519 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY--TCVVDMLGRAGRIDDALRLIEEMPG 576
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ D W+ LL+ G L E+ K+++
Sbjct: 577 DPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 608
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 16/234 (6%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL-AMRTGLISYIIIANT 439
D +++ Q EA G + L AC ++++G +LH++ + T + ++
Sbjct: 96 DVVLDSAQRSEAMGVL---------LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTR 146
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKP 497
+I MYS C + VF ++ KN+ W +I+ N +A+ F +++ KP
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 206
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++ TL ++ ACA + L G+ IH A ++ + D F+ NAL+ MY +CG ++ A +
Sbjct: 207 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 558 NS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ + VS+WN LL GYA+ A + + +M DS +W + L C
Sbjct: 267 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 238/426 (55%), Gaps = 3/426 (0%)
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
++ GYAK+ D ALS + RM V+P VY F +L+ CG DLKRGKE+H VI
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKH-DSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ ++ + ++ MY KC + A +FD MP+RD + WN MISGY +NG LML
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ M E PD +T+ S++ A ++G VHGYV++ GF V+V L+ MY
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ +F M+ + VVSW +MI Y S + A+ +Q M EG P +T+ L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA LG+L+ G +H+L + L S + + N+LI MYSKCK +D A ++F + +K ++
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++ILG N EAL F +M N+KP+S T+VS++ A A + K IH
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAE 584
+R + + F+ AL+DMY +CG + A F+ N R V WN ++ GY G G +
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419
Query: 585 EFFRKM 590
E F++M
Sbjct: 420 ELFKEM 425
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 244/487 (50%), Gaps = 7/487 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+ SL+ AL + M+ ++ L++LC G +H V + ++
Sbjct: 8 SSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFA 67
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
++M+ K + A+ +F +M +RDL WN +I GYA+ GF AL L RM G
Sbjct: 68 MTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGH 127
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD T +L L+ G VH +V+R G+E+ V+V AL+ MY KCG + AR
Sbjct: 128 -RPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIAR 186
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++FDGM R +SWN+MI GY ++G+ +++F M + V P +T+ + A +G
Sbjct: 187 VIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ VH V ++ DVSV N LI MY + +F + +K +VSW MI
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMIL 306
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + ++A+ + M++ PD T+ SV+ A A L +H L +R L
Sbjct: 307 GYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDK 366
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+DMY+KC I A ++F + ++VI+W ++I G + ++ F++M
Sbjct: 367 NVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMK 426
Query: 493 L-NLKPNSVTLVSILSACARIGAL---MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+KPN +T + LSAC+ G + +C E I D + A++D+ R G
Sbjct: 427 KGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHY--GAMVDLLGRAG 484
Query: 549 RMKPAWN 555
R+ AW+
Sbjct: 485 RLNQAWD 491
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +G E A+ M + + ++ + C + G ++H +V +
Sbjct: 201 NSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQ 260
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ +SM+ K + A +F + ++ L SWN +I GYA+ G +EAL+
Sbjct: 261 LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNA 320
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +KPD +T V+ + ++ K +H VIR + +V V+ AL+ MY
Sbjct: 321 FCEM-QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYA 379
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR +FD M R I+WNAMI GY +G + LF M++ + P+ +T
Sbjct: 380 KCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLC 439
Query: 304 VISASELVG 312
+SA G
Sbjct: 440 ALSACSHSG 448
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 2/225 (0%)
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M+ Y S D A+ + M+ + P +L C +L G ++H + +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ +++MY+KC+ I+ A +F ++P+++++ W ++I G N + AL+
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M +P+S+T+VSIL A A L G +H + LR G + AL+DMY +CG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A F+ + R V +WN ++ GY + G A F+KM+D
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD 225
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 264/470 (56%), Gaps = 12/470 (2%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G++ A +F K D D+F WN ++ Y++ GFF A+ +Y RM V V PD ++FPCV
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARM-QVACVSPDGFSFPCV 179
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C +P L+ G+ VH + R G+E+DV V N L+ +Y KCG++VRA VF + R
Sbjct: 180 LKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTI 239
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
+SW ++ISGY +NG+ ++ L +F MR+ V PD++ L SV+ A V D + G+ +HG
Sbjct: 240 VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
VIKMG + + L +Y G+ F+++E+ ++ W MIS Y + ++A
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEA 359
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+E +++M+++ PD IT+ S ++ACA +G+L+L + + + + +I+ +LID
Sbjct: 360 IELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDT 419
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTL 502
Y+KC +D A VF +IPDK+V+ W+++++G L+ + E++I F M + PN VT
Sbjct: 420 YAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTF 479
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-- 560
V +L+AC G + G ++ G+ ++D+ R G + A+N F N
Sbjct: 480 VGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYN-FVMNMP 538
Query: 561 -ERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
E VS W LL+ + G+ A AE F + G++ +L L+
Sbjct: 539 IEPGVSVWGALLSACKIHRHVTLGEYA-AERLFSLDPYNTGHYVQLSNLY 587
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 200/407 (49%), Gaps = 2/407 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G A++ MQ + D + +++ C + G +H + + V +
Sbjct: 151 HGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFV 210
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N ++++ K G++ A VFG++ DR + SW +I GYA+ G EAL ++ M
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKT-N 269
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PD VLR V DL+ GK +H VI+ G E + D++ +L ++Y KCG ++ AR
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L F+ + I WNAMISGY +NG + + LF +M+ + PD +T++S I+A +G
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+L R + Y+ F +DV V LI Y G+ + VF R+ KDVV W+ M+
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +++ + M G P+++T +L+AC G ++ G L G+
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEP 509
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
++D+ + +D+A +P + V W +++ +++
Sbjct: 510 RHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 4/379 (1%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
++ L+ G++ AR +FD P D WNA++ Y +G + + ++ M+
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD + V+ A + ++GR VHG + + GF DV V N L+ +Y G
Sbjct: 169 VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRAN 228
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF R+ + +VSWT++IS Y + P +A+ + M PD I + SVL A +
Sbjct: 229 AVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVE 288
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L+ G +H ++ GL + +L +Y+KC + A F+Q+ + ++I W ++I
Sbjct: 289 DLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMIS 348
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N + EA+ FR M N++P+S+T+ S ++ACA+IG+L + + +
Sbjct: 349 GYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRN 408
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D + +L+D Y +CG + A F+ ++DV W+ ++ GY GQG + F M
Sbjct: 409 DVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMR 468
Query: 592 DS--KGNWRKLMGLFRKCQ 608
+ N +GL C+
Sbjct: 469 QAGVSPNDVTFVGLLTACK 487
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG E+A++ M+ NI D + + + C + ++ +S
Sbjct: 344 NAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISM 403
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + + + + K G + A +VF ++ D+D+ W+ ++ GY G E++ L
Sbjct: 404 SEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIIL 463
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV P+ TF +L C ++ G ++ + +G E ++ +
Sbjct: 464 FHAMRQ-AGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLG 522
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ G L RA MP +S W A++S
Sbjct: 523 RAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 259/477 (54%), Gaps = 10/477 (2%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F++ G++G+A VF + + +F WN +I GY+ FF +A+ +Y RM GV P
Sbjct: 109 FVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRM-QASGVNP 167
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +T PCVL+ C GVP L+ GK VH + R G+E+DV V N L+ +Y KCG + +AR+VF
Sbjct: 168 DGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVF 227
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+G+ R+ +SW +MISGY +NG M+ L +F MR+ V PD++ L SV+ A V D +
Sbjct: 228 EGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLE 287
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG V+KMG + + L MY G F +ME +V+ W MIS Y
Sbjct: 288 QGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYA 347
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++AV +Q M ++ D IT+ S + ACA +G+LDL + +T + +
Sbjct: 348 KNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVF 407
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ LIDM++KC +D A EVF + DK+V+ W+++I+G L+ R +A+ F M
Sbjct: 408 VNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAG 467
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ PN VT V +L+AC G + G E+ G+ ++D+ R G + A+
Sbjct: 468 VCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAY 527
Query: 555 NQFNSN--ERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ + E VS W LL + G+ A AE+ F + G++ +L L+
Sbjct: 528 DFITTMPIEPGVSVWGALLGACKIYRHVTLGEYA-AEQLFSLDPFNTGHYVQLSNLY 583
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 195/375 (52%), Gaps = 2/375 (0%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G +V + G++ AR VFD P+ WNA+I GY +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + ++ M+ V+PD TL V+ A V ++G+ VHG + ++GF DV V N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ +Y G E+ VF ++ +++VSWT+MIS Y + LP +A+ + M P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D I + SVL A + +L+ G +H ++ GL + +L MY+KC + A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
Q+ NV+ W ++I G N + EA+ F++M+ N++ +S+T+ S + ACA++G+L
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA 575
K + + + D F+ AL+DM+ +CG + A F+ ++DV W+ ++ GY
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448
Query: 576 ERGQGALAEEFFRKM 590
G+G A + F M
Sbjct: 449 LHGRGQDAIDLFYAM 463
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 193/396 (48%), Gaps = 1/396 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A++ MQ + D L +++ C + G +H + + V + N ++
Sbjct: 153 AIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVA 212
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
++ K G + A VF + DR++ SW +I GY + G EAL ++ +M VKPD
Sbjct: 213 LYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQM-RQRNVKPDWI 271
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VLR V DL++GK +H V++ G E + D++ +L MY KCG ++ AR FD M
Sbjct: 272 ALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQM 331
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+ + WNAMISGY +NG + + LF M + D +T+ S I A VG L +
Sbjct: 332 EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAK 391
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+ Y+ K + +DV V LI M+ G+ + +VF R KDVV W+ MI Y
Sbjct: 392 WMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHG 451
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
A++ + M+ G P+++T +L+AC G ++ G +L G+ +
Sbjct: 452 RGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYA 511
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
++D+ + +++A + +P + +S +LG
Sbjct: 512 CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 141/275 (51%), Gaps = 2/275 (0%)
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H ++ G + + + + G KVF V W +I Y
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
A+E Y M+A G PD T+ VL AC+ + L++G ++H R G S + + N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
L+ +Y+KC +++A VF + D+N++SWTS+I G N EAL F +M N+KP
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ + LVS+L A + L GK IH +++G+ F+ L +L MY +CG++ A + F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ E +V WN +++GYA+ G A F++MI
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMI 363
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 1/248 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ M++ N+ D ALV+++R ++G +H V K L
Sbjct: 248 NGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL 307
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +M+ K G + A F +M ++ WN +I GYAK G+ +EA+ L+Q M
Sbjct: 308 LISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMI-SKN 366
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D T + C V L K + ++ + Y DV V ALI M+ KCG + AR
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAR 426
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD +D + W+AMI GY +G + LF M++ V P+ +T +++A G
Sbjct: 427 EVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSG 486
Query: 313 DEKLGREV 320
+ G E+
Sbjct: 487 LVEEGWEL 494
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 2/210 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG +A+ M NI D + + + C D ++ ++K
Sbjct: 340 NAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINK 399
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T V + A + MF K G + A VF + D+D+ W+ +I GY G +A+ L
Sbjct: 400 TEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDL 459
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV P+ TF +L C ++ G E+ + +G EA ++ +
Sbjct: 460 FYAM-KQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLG 518
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ G L A MP +S W A++
Sbjct: 519 RSGHLNEAYDFITTMPIEPGVSVWGALLGA 548
>gi|255570994|ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534228|gb|EEF35943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 557
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 268/489 (54%), Gaps = 12/489 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR--DLFSWNVLIGG 170
+ L H + +H + + + +++ + +A ++F K R + WN+LI
Sbjct: 34 QNLLKHHIAKNNDTHFRLVI-EKLMHLYLVCNEDQYARHLFDKSPQRPRKVVIWNMLIRA 92
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
YA G F EA++LY +M +G ++P YT+P VL+ C + ++ GKE+H+H R ++
Sbjct: 93 YAWNGPFTEAINLYYKMLELG-IQPSKYTYPFVLKACSALQAIEEGKEIHIHAKRLDLDS 151
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY-FENGEYMKGLMLFIMM 289
DV V A++ MY KCG L A +VF GMP RD ++WN+MI+G+ Y + + L M
Sbjct: 152 DVYVSTAVVDMYAKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQLLAQM 211
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++ LV P+ T+ +V+ A G+ +HG+ ++ G+ DDV V L+ MY
Sbjct: 212 QKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVVATGLLDMYGKCQCI 271
Query: 350 EEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMM----EAEGSMPDEITIAS 404
F M ++ V+W+ M+ Y L +A++ +Q M +A P E+T+A+
Sbjct: 272 IYARNFFDMMSIVRNEVTWSAMLGAYVMCELMREALDLFQYMMRIKDAAVKSPTEVTLAT 331
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL ACA L ++ G +H +++G IS +++ NTL+ Y+KC + A+ FH++ K+
Sbjct: 332 VLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTYAKCGTVSDAIRYFHEMELKD 391
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+S+++II G N + EAL F +M L+ + P T+V IL ACA + AL G H+
Sbjct: 392 EVSYSAIISGCMQNGNAKEALSMFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHS 451
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
+AL G + + NAL+DMY +CGR+ A N F+ ++RD+ +WN ++ Y G G
Sbjct: 452 YALIKGFTSEITICNALIDMYAKCGRIDTARNVFDRMHKRDIVSWNAMIIAYGNHGLGME 511
Query: 583 AEEFFRKMI 591
A F M+
Sbjct: 512 ALLLFDNML 520
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 219/448 (48%), Gaps = 8/448 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A+ M EL I + +++ C + +EG +H + V +
Sbjct: 96 NGPFTEAINLYYKMLELGIQPSKYTYPFVLKACSALQAIEEGKEIHIHAKRLDLDSDVYV 155
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-FDEALSLYQRMFWVG 191
A + M+ K G L A VF M RD+ +WN +I G++ ++E + L +M
Sbjct: 156 STAVVDMYAKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQLLAQM-QKD 214
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+P+ T VL L GK +H +R GY DV V L+ MY KC ++ A
Sbjct: 215 LVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVVATGLLDMYGKCQCIIYA 274
Query: 252 RLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLF-IMMR---EVLVDPDFMTLSSVIS 306
R FD M R+ ++W+AM+ Y + L LF MMR + P +TL++V+
Sbjct: 275 RNFFDMMSIVRNEVTWSAMLGAYVMCELMREALDLFQYMMRIKDAAVKSPTEVTLATVLR 334
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + D GR +H Y IK GF D+ + N L+ Y G + + F ME KD VS
Sbjct: 335 ACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTYAKCGTVSDAIRYFHEMELKDEVS 394
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
++ +IS + +A+ + M G P+ T+ +L ACA L L G H A+
Sbjct: 395 YSAIISGCMQNGNAKEALSMFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHSYAL 454
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G S I I N LIDMY+KC ID A VF ++ ++++SW ++I+ + EAL+
Sbjct: 455 IKGFTSEITICNALIDMYAKCGRIDTARNVFDRMHKRDIVSWNAMIIAYGNHGLGMEALL 514
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIG 513
F M+ + L+P+ VT + +LSAC+ G
Sbjct: 515 LFDNMLADGLEPDDVTFICLLSACSHSG 542
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 8/348 (2%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L+ +C N + ++ L MQ+ + + +V ++ G LH +
Sbjct: 196 LHRVCYN----ETIQLLAQMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGY 251
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQ 185
V + L M+ K + +A F M R+ +W+ ++G Y EAL L+Q
Sbjct: 252 IDDVVVATGLLDMYGKCQCIIYARNFFDMMSIVRNEVTWSAMLGAYVMCELMREALDLFQ 311
Query: 186 RMFWV--GGVK-PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
M + VK P T VLR C + D+ RG+ +H + I+ G+ +D+ + N L++ Y
Sbjct: 312 YMMRIKDAAVKSPTEVTLATVLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTY 371
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + A F M +D +S++A+ISG +NG + L +F MR +DP+ T+
Sbjct: 372 AKCGTVSDAIRYFHEMELKDEVSYSAIISGCMQNGNAKEALSMFHRMRLSGMDPELATMV 431
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++ A + + G H Y + GF+ ++++CN LI MY G + VF RM +
Sbjct: 432 GILPACAHLAALQHGSCCHSYALIKGFTSEITICNALIDMYAKCGRIDTARNVFDRMHKR 491
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
D+VSW MI Y L +A+ + M A+G PD++T +LSAC+
Sbjct: 492 DIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVTFICLLSACS 539
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 258/478 (53%), Gaps = 6/478 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS L +R+GNA + M+ K G + A VF M +RD+FSW V+IGG A+ G
Sbjct: 342 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGR 401
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDV 234
EA SL+ +M G P++ T+ +L L+ K VH H G+ +D+ +
Sbjct: 402 GQEAFSLFLQM-QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NALI MY KCG + ARLVFDGM RD ISWNAM+ G +NG + +F+ M++ +
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGL 520
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T S+++ + EVH + ++ G D V + I MY+ G+ ++
Sbjct: 521 VPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARL 580
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F ++ + V +W MI +A+ + M+ EG +PD T ++LSA
Sbjct: 581 LFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEA 640
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L+ ++H A GL+ + + N L+ YSKC + A +VF + ++NV +WT +I G
Sbjct: 641 LEWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGG 699
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
L + +A F +M+ + P++ T VSILSACA GAL KE+H HA+ G+ D
Sbjct: 700 LAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSD 759
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+ MY +CG + A + F+ ERDV +W +++ G A+ G+G A +FF KM
Sbjct: 760 LRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKM 817
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 274/520 (52%), Gaps = 5/520 (0%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+ + A+ L + I +D + VN+++ C + +H + K+ ++ + N
Sbjct: 98 TAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVAN 157
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
L ++++ G L A VF K+ ++++ W +IGGYA+ G ++A+ +Y +M G +
Sbjct: 158 KLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-Q 216
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P+ T+ +L+ C +LK GK++H H+I+ G+++DV V AL+ MYVKCG + A+L+
Sbjct: 217 PNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLI 276
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M +R+ ISW MI G G + LF+ M+ P+ T S+++A+ G
Sbjct: 277 FDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ +EVH + + G + D+ V N L+ MY G+ ++ VF M +D+ SWT MI
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGL 396
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVL--SACACLGNLDLGIKLHQLAMRTGLIS 432
+A + M+ G +P+ T S+L SA A L+ +H+ A G IS
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFIS 456
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ I N LI MY+KC ID A VF + D++VISW +++ GL N EA F +M
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L P+S T +S+L+ AL E+H HA+ G+ D + +A + MY+RCG +
Sbjct: 517 QEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ + R V+ WN ++ G A++ G A F +M
Sbjct: 577 DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQM 616
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 269/522 (51%), Gaps = 6/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A++ D M++ +E +++++ C G +H+ + ++ VR+
Sbjct: 198 GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A ++M+VK G + A +F KM +R++ SW V+IGG A G EA L+ +M G +
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ YT+ +L L+ KEVH H + G D+ V NAL+ MY K G + AR+
Sbjct: 318 -PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 376
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDGM +RD SW MI G ++G + LF+ M+ P+ T S+++AS +
Sbjct: 377 VFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436
Query: 314 EKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
L + VH + + GF D+ + N LI MY G+ ++ VF M +DV+SW M+
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A + M+ EG +PD T S+L+ L+ ++H+ A+ TGLI
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + + I MY +C ID A +F ++ ++V +W ++I G EAL F +M
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQM 616
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
P++ T ++ILSA AL KE+H+HA G+ D + NAL+ Y +CG +
Sbjct: 617 QREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNV 675
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
K A F+ ER+V+ W +++ G A+ G G A F +M+
Sbjct: 676 KYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQML 717
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 239/462 (51%), Gaps = 12/462 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+R+GNA + M+ K G + A VF MCDRD+ SWN ++GG A+ G EA +++ +M
Sbjct: 458 LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ 517
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G V PD T+ +L T G L+ EVH H + G +D V +A I MY++CG +
Sbjct: 518 EGLV-PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
ARL+FD + R +WNAMI G + + L LF+ M+ PD T +++SA+
Sbjct: 577 DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSAN- 635
Query: 310 LVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
V +E L +EVH + G D + V N L+ Y GN + ++VF M ++V +W
Sbjct: 636 -VDEEALEWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTW 693
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI A + M EG +PD T S+LSACA G L+ ++H A+
Sbjct: 694 TMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVS 753
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL+S + + N L+ MY+KC ID A VF + +++V SWT +I GL + R EAL F
Sbjct: 754 AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDF 813
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYV 545
F KM KPN + V++L+AC+ G + G ++ + G+ ++D+
Sbjct: 814 FVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLG 873
Query: 546 RCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAE 584
R G ++ A F N E D + W LL G +AE
Sbjct: 874 RAGLLEEA-ELFILNMPIEPDDAPWGALLGACVTYGNLEMAE 914
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 219/453 (48%), Gaps = 19/453 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL------CEWKRGYDEGLYL 117
N+ + L NG +A MQ+ + D ++L+ EW ++
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWV----NEVHK 548
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H+V + +S R+G+AF+ M+++ G + A +F K+ R + +WN +IGG A+
Sbjct: 549 HAVETGLISDF--RVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCG 606
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
EALSL+ +M G + PD TF +L L+ KEVH H G D+ V NA
Sbjct: 607 REALSLFLQMQREGFI-PDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNA 664
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDP 296
L+ Y KCG++ A+ VFD M +R+ +W MI G ++G F+ M+RE +V P
Sbjct: 665 LVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIV-P 723
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D T S++SA G + +EVH + + G D+ V N L+ MY G+ ++ VF
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M +DV SWT MI +A++ + M++EG P+ + +VL+AC+ G +D
Sbjct: 784 DDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVD 843
Query: 417 LGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
G + + G+ + ++D+ + +++A +P + + W + +LG
Sbjct: 844 EGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGA-LLG 902
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ + E F K L LKP S + +LS
Sbjct: 903 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 935
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 272/519 (52%), Gaps = 5/519 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D V L + C R G + + ++ L++ N + + G++ A
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + ++ + +WN +I GYA+ G EA +L+++M ++P + TF VL C
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV-DEAMEPSIITFLIVLDACSSPAG 177
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
LK GKE H VI+ G+ +D + AL++MYVK G + AR VFDG+ KRD ++N MI G
Sbjct: 178 LKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGG 237
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y ++G+ K LF M++ P+ ++ S++ G+ VH + G DD
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V LI+MY+ G+ E +VF +M+ +DVVSWT MI Y + + A + M+
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD IT +++ACA +L L ++H +R G + +++ L+ MY+KC I
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
A +VF + ++V+SW+++I N EA F M N++P+ VT +++L+AC
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNIL 570
+GAL G EI+ A++ + + NAL++M V+ G ++ A F N +RDV WN++
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537
Query: 571 LTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ GY+ G A + F +M+ + N +G+ C
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSAC 576
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 251/472 (53%), Gaps = 5/472 (1%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C G G H+ V K R+G A +SM+VK G + A VF + RD+ ++
Sbjct: 172 CSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTF 231
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
NV+IGGYAK+G ++A L+ RM G KP+ +F +L C L GK VH +
Sbjct: 232 NVMIGGYAKSGDGEKAFQLFYRM-QQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCM 290
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G DV V ALI MY+ CG + AR VFD M RD +SW MI GY EN
Sbjct: 291 NTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFG 350
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M+E + PD +T +I+A D L RE+H V++ GF D+ V L+ MY
Sbjct: 351 LFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYA 410
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G ++ +VF M +DVVSW+ MI Y + ++A ET+ +M+ PD +T +
Sbjct: 411 KCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYIN 470
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L+AC LG LDLG++++ A++ L+S+I + N LI+M K I++A +F + ++
Sbjct: 471 LLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRD 530
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
V++W +I G L+ + EAL F +M+ +PNSVT V +LSAC+R G + G+ +
Sbjct: 531 VVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFS 590
Query: 524 HALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
+ L G+ L ++D+ R G + A N + + S W+ LL
Sbjct: 591 YLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 3/407 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+A + MQ+ + + ++++ C G +H+ T VR+
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++ G + A VF KM RD+ SW V+I GYA+ ++A L+ M G
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATM-QEEG 359
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD T+ ++ C DL +E+H V+R G+ D+ V AL+ MY KCG + AR
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD +SW+AMI Y ENG + F +M+ V+PD +T ++++A +G
Sbjct: 420 QVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLG 479
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG E++ IK + V N LI M + G+ E +F M +DVV+W MI
Sbjct: 480 ALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIG 539
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-TGLI 431
Y +A++ + M E P+ +T VLSAC+ G ++ G + + G++
Sbjct: 540 GYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIV 599
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ + ++D+ + +D+A + +++P K N W++++ R+
Sbjct: 600 PTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 6/324 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++E A +MQE I D ++++ C +HS V + + +
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G + A VF M RD+ SW+ +IG Y + G +EA + M
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLM-KRNN 460
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PDV T+ +L CG + L G E++ I+ + + V NALI M VK G + RAR
Sbjct: 461 VEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERAR 520
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ M +RD ++WN MI GY +G + L LF M + P+ +T V+SA G
Sbjct: 521 YIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAG 580
Query: 313 DEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-WTTM 370
+ GR Y++ G + + ++ + G +E E + +RM K S W+T+
Sbjct: 581 FVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTL 640
Query: 371 ISC---YEGSVLPDKAVETYQMME 391
++ Y + ++A E M E
Sbjct: 641 LAACRIYGNLDVAERAAERCLMSE 664
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 261/460 (56%), Gaps = 9/460 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R L+ WN L+ ++ ++E L + MF KPD +T P L+ CG + ++
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACGELREVNY 59
Query: 216 GKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ +H V + +D+ V ++LI MY+KCG ++ A +FD + K D ++W++M+SG+
Sbjct: 60 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 119
Query: 275 ENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + + F M+ V PD +TL +++SA + + +LGR VHG+VI+ GFS+D+
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
S+ N L+ Y +E +F + KDV+SW+T+I+CY + +A+ + M +
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G+ P+ T+ VL ACA +L+ G K H+LA+R GL + + ++ L+DMY KC ++A
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACAR 511
VF +IP K+V+SW ++I G LN + ++ F M+L N +P+++ +V +L +C+
Sbjct: 300 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+G L K H++ ++ G + F+ +L+++Y RCG + A FN +D W L
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 571 LTGYAERGQGALAEEFFRKMIDS---KGNWRKLMGLFRKC 607
+TGY G+G A E F M+ S K N + + C
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 459
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 239/462 (51%), Gaps = 4/462 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L E+ L + M D L ++ C R + G +H V K
Sbjct: 10 NTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKK 69
Query: 124 TMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ S + +G++ + M++K G + A +F ++ D+ +W+ ++ G+ K G +A+
Sbjct: 70 DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVE 129
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++RM V PD T ++ C + + + G+ VH VIR G+ D+ +VN+L+ Y
Sbjct: 130 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 189
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K A +F + ++D ISW+ +I+ Y +NG + L++F M + +P+ T+
Sbjct: 190 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 249
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+ A D + GR+ H I+ G +V V L+ MY+ + EE VFSR+ K
Sbjct: 250 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 309
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKL 421
DVVSW +IS + + + +++E + +M E + PD I + VL +C+ LG L+
Sbjct: 310 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 369
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G S I +L+++YS+C + A +VF+ I K+ + WTS+I G ++ +
Sbjct: 370 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 429
Query: 482 FEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEI 521
+AL F M+ + +KPN VT +SILSAC+ G + G I
Sbjct: 430 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 471
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 73 NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NGS QA+++ M ++ D L+ LV C G +H V + +
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ L+ + K A +F + ++D+ SW+ +I Y + G EAL ++ M
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM-DD 239
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+V T CVL+ C DL++G++ H IR G E +V V AL+ MY+KC A
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASEL 310
VF +P++D +SW A+ISG+ NG + + F IM+ E PD + + V+ +
Sbjct: 300 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G + + H YVIK GF + + L+++Y G+ KVF+ + KD V WT++
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 371 ISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
I+ Y KA+ET+ M+++ P+E+T S+LSAC+ G + G+++ +L +
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN-- 477
Query: 430 LISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
Y + N L+D+ + +D A+E+ ++P S T ILG L
Sbjct: 478 --DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP----FSPTPQILGTLL 524
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 287/522 (54%), Gaps = 13/522 (2%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
++A+K +M + + D+ +++ C + EG+ +H ++ V +G
Sbjct: 108 FQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTG 167
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L +A VF KM +D+ SWN +I G +++ EAL ++QRM GV+P
Sbjct: 168 LVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEP 227
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIR---FGYEADVDVVNALITMYVKCGDLVRAR 252
D + + + D+ K +H +V+R FG V N+LI MY KCG++ A
Sbjct: 228 DSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV-----VSNSLIDMYSKCGEVKLAH 282
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT-LSSVISASELV 311
+FD M +D ISW M++GY +G Y + L L M+ + + ++ ++SV++A+E
Sbjct: 283 QIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETR 342
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
EK G+EVH Y +++G + D+ V P++ MY G ++ ++ F +E +D+V W+ +
Sbjct: 343 DLEK-GKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFL 401
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + P +A+ +Q M+ EG PD+ ++S++SACA + + LG +H ++ +
Sbjct: 402 SALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMG 461
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRK 490
S I +A TL+ MY++CK A+ +F+++ K+V++W ++I G + + +F R
Sbjct: 462 SDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRL 521
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ ++P+S T+VS+LSACA + L G H + ++ G+ + + AL+DMY +CG +
Sbjct: 522 QLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSL 581
Query: 551 KPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A N F+ N+ +D +WN+++ GY G A F +M
Sbjct: 582 CTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQM 623
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 247/465 (53%), Gaps = 4/465 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ N+ + M+ K G++ A +F +M +D SW ++ GY G + E L L M
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKR-K 322
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+K + + + DL++GKEVH + ++ G +D+ V +++MY KCG+L +A
Sbjct: 323 HIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKA 382
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ F + RD + W+A +S + G + L +F M+ + PD LSS++SA +
Sbjct: 383 KEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEI 442
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+LG+ +H YVIK D+SV L+ MY + +F+RM KDVV+W T+I
Sbjct: 443 SSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLI 502
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + P A+E + ++ G PD T+ S+LSACA L +L LGI H ++ G+
Sbjct: 503 NGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIE 562
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + LIDMY+KC + A +FH K+ +SW +I G N + EA+ F +
Sbjct: 563 SEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQ 622
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L +++PN VT V+IL A + + L HA +R+G + N+L+DMY + G+
Sbjct: 623 MKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQ 682
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ + F+ E + +WN +L+GYA GQG +A F M ++
Sbjct: 683 LSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQET 727
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 228/433 (52%), Gaps = 6/433 (1%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L WN LI Y++ F EA+ YQ M ++ G++PD YTF VL+ C G D G +H
Sbjct: 92 LILWNSLIRAYSRLHLFQEAIKSYQTMSYM-GLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ E DV + L+ MY K G L AR VFD MP +D SWNAMISG ++
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210
Query: 281 KGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ L +F M+ E V+PD +++ ++ A + D + +HGYV++ VS N L
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVS--NSL 268
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I MY G + ++F +M KD +SW TM++ Y + ++ M+ + ++
Sbjct: 269 IDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
I++ + + A +L+ G ++H A++ G+ S I++A ++ MY+KC + KA E F
Sbjct: 329 ISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLS 388
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+ ++++ W++ + L EAL F++M LKP+ L S++SACA I + G
Sbjct: 389 LEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLG 448
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
K +H + ++ + D + L+ MY RC A FN + +DV AWN L+ G+ +
Sbjct: 449 KMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKC 508
Query: 578 GQGALAEEFFRKM 590
G LA E F ++
Sbjct: 509 GDPRLALEMFLRL 521
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 234/451 (51%), Gaps = 3/451 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + L+ LD M+ +I +++ ++VN V R ++G +H+ + + +
Sbjct: 306 HGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVV 365
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+SM+ K G+L A F + RDL W+ + +AG+ EALS++Q M G
Sbjct: 366 ATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEM-QHEG 424
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD ++ C + + GK +H +VI+ +D+ V L++MY +C + A
Sbjct: 425 LKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAM 484
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ M +D ++WN +I+G+ + G+ L +F+ ++ V PD T+ S++SA L+
Sbjct: 485 TLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLD 544
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTTMI 371
D LG HG +IK G ++ V LI MY G+ E +F KD VSW MI
Sbjct: 545 DLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMI 604
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + ++A+ T+ M+ E P+ +T ++L A + L L + H +R G I
Sbjct: 605 AGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFI 664
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S +I N+LIDMY+K + + + FH++ +K ISW +++ G ++ + AL F M
Sbjct: 665 SSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLM 724
Query: 492 MLNLKP-NSVTLVSILSACARIGALMCGKEI 521
P +SV+ +S+LSAC G + G+ I
Sbjct: 725 QETHVPVDSVSYISVLSACRHAGLIQEGRNI 755
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 9/452 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L+ L G +AL MQ + D+ L +LV C G +H V K
Sbjct: 401 LSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADM 460
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ + +SM+ + +A +F +M +D+ +WN LI G+ K G AL ++ R
Sbjct: 461 GSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLR 520
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ + GV+PD T +L C + DL G H ++I+ G E+++ V ALI MY KCG
Sbjct: 521 L-QLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCG 579
Query: 247 DLVRARLVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L A +F +D +SWN MI+GY NG + + F M+ V P+ +T +++
Sbjct: 580 SLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTIL 639
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + + H +I+MGF + N LI MY G EK F ME+K +
Sbjct: 640 PAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTI 699
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-L 424
SW M+S Y + A+ + +M+ D ++ SVLSAC G + G + Q +
Sbjct: 700 SWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSM 759
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFE 483
+ L + ++D+ D+ L + ++P + + W +++ ++++
Sbjct: 760 TEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKL 819
Query: 484 ALIFFRKMMLNLKPNS----VTLVSILSACAR 511
I +L L+P + + L I + C R
Sbjct: 820 GEIALHH-LLKLEPRNAVHYIVLSDIYAQCGR 850
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG 518
I + ++I W S+I + EA+ ++ M + L+P+ T +L AC G
Sbjct: 87 ITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEG 146
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAER 577
IH + D F+ L+DMY + G + A F+ +DV++WN +++G ++
Sbjct: 147 VAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQS 206
Query: 578 GQGALAEEFFRKMIDSKG 595
A E F++M +G
Sbjct: 207 SNPCEALEIFQRMQMEEG 224
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 254/445 (57%), Gaps = 5/445 (1%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF +M DR F+WN LIG Y G AL +Y+ M V GV D+Y+FP +L+ CG +
Sbjct: 118 VFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNM-RVEGVPLDLYSFPVLLKACGKLR 176
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG-MPKRDRISWNAMI 270
D++ G E+H +++ G+ + +VNAL++MY K L A+ +FD K D + WN+++
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
S Y +G+ ++ L LF M+ + T+ S ++A E KLG+E+H V+K S
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+V VCN LI MY G E ++ M + DVV+W ++I Y +++ +A++ + M
Sbjct: 297 FEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDM 356
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
A G PDE+++ SV++A L NL G++LH ++ G S +++ NTLIDMYSKC
Sbjct: 357 IAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLT 416
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
F + +K++ISWT+II G LN+ EAL FR + ++ + + L SIL AC
Sbjct: 417 CYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRAC 476
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + +++ KEIH H LR G+ D + N L+D+Y +C M A F S +DV +W
Sbjct: 477 SVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWT 535
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
+++ A G A E FR+M ++
Sbjct: 536 SMISSSALNGNENEAVELFRRMAET 560
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 271/524 (51%), Gaps = 11/524 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL +M+ + +D + L++ C R G LH ++ K + + +
Sbjct: 140 NGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFI 199
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA +SM+ K L A +F ++ D WN ++ Y+ +G E L L++ M +
Sbjct: 200 VNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREM-QMT 258
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + YT L C G K GKE+H V++ + +V V NALI MY +CG ++ A
Sbjct: 259 GPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEA 318
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ M D ++WN++I GY +N Y + L F M PD ++L+SVI+AS +
Sbjct: 319 GRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRL 378
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G E+H YVIK G+ ++ V N LI MY + F M KD++SWTT+I
Sbjct: 379 SNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTII 438
Query: 372 SCYEGSVLPDKAVETYQMME--AEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ Y L D VE Q+ A+ M DE+ + S+L AC+ L ++ + ++H +R
Sbjct: 439 AGY---ALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRK 495
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GLI +I N L+D+Y KC+ + A VF I K+V+SWTS+I LN EA+ F
Sbjct: 496 GLID-TVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELF 554
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R+M L +SV L+ ILSA A + AL G+EIH + LR G +G + A++DMY C
Sbjct: 555 RRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACC 614
Query: 548 GRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
G ++ A F+ ER + + ++ Y G G + E F KM
Sbjct: 615 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKM 658
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 224/475 (47%), Gaps = 8/475 (1%)
Query: 42 KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
K ++ ++L N + + T N S + N ++AL++ M DE +L ++
Sbjct: 314 KMLEAGRILRLMNNADVVTWN--SLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSV 371
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ G+ LH+ V K ++ +GN + M+ K + F M ++DL
Sbjct: 372 IAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDL 431
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW +I GYA EAL L+ R ++ D +LR C + + KE+H
Sbjct: 432 ISWTTIIAGYALNDCHVEALQLF-RDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHC 490
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H++R G D + N L+ +Y KC ++ A VF+ + +D +SW +MIS NG +
Sbjct: 491 HILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENE 549
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M E + D + L ++SA+ + K GRE+HGY+++ GF + S+ ++
Sbjct: 550 AVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVD 609
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + + VF R+E K ++ +T+MI+ Y +VE + M E PD I+
Sbjct: 610 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHIS 669
Query: 402 IASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++L AC+ G LD G + L + + L + L+DM + C+ +A E +
Sbjct: 670 FLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 729
Query: 461 PDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG 513
+ W +++ R ++ I ++ +L L+P N LV + + A G
Sbjct: 730 KTEPTTEVWCALLAACRSHSEKEIGEIAAQR-LLELEPKNPGNLVLVSNVFAEQG 783
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 119/242 (49%), Gaps = 3/242 (1%)
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
EKVF M + +W +I Y + P A+ Y+ M EG D + +L AC L
Sbjct: 116 EKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKL 175
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSI 471
++ G +LH + ++ G S I N L+ MY+K + A +F +K + + W SI
Sbjct: 176 RDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSI 235
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ + +S E L FR+M M NS T+VS L+AC GKEIHA L+
Sbjct: 236 LSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTH 295
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+F+ ++ NAL+ MY RCG+M A N DV WN L+ GY + A +FF
Sbjct: 296 SFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCD 355
Query: 590 MI 591
MI
Sbjct: 356 MI 357
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 256/481 (53%), Gaps = 9/481 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+++ S+ + ++++ GD+ + F ++ +D+++WN +I Y G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F EA+ + ++ V ++PD YTFP VL+ CG + D G+ +H + G++ +V V
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAA 254
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI MY + G AR +FD MP RD SWNAMISG +NG + L + MR +
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+F+T+ S++ +GD +H YVIK G D+ V N LI MY FGN E+ K F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M DVVSW ++I+ YE + P A + M+ G PD +T+ S+ S A +
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434
Query: 417 LGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+H MR G L+ ++I N ++DMY+K +D A +VF I K+VISW ++I G
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494
Query: 476 RLNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N + EA+ + KMM K PN T VSIL A A +GAL G IH ++ +
Sbjct: 495 AQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHL 553
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMI 591
D F+ L+D+Y +CGR+ A + F ++ S WN +++ + G + F +M+
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613
Query: 592 D 592
D
Sbjct: 614 D 614
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 244/464 (52%), Gaps = 6/464 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H K +V + + + M+ +FG G A +F M RD+ SWN +I G
Sbjct: 233 DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLI 292
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +AL + M + G+K + T +L C + D+ +H++VI+ G E D+
Sbjct: 293 QNGNAAQALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY K G+L AR F M D +SWN++I+ Y +N + + F+ M+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREE 351
PD +TL S+ S D K R VHG++++ G+ +DV + N ++ MY G +
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM-EAEGSMPDEITIASVLSACA 410
KVF + KDV+SW T+I+ Y + L +A+E Y+MM E + +P++ T S+L A A
Sbjct: 472 AHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 531
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+G L G+++H ++T L + +A LID+Y KC + A+ +F+Q+P ++ ++W +
Sbjct: 532 HVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 591
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II ++ + + L F +M+ +KP+ VT VS+LSAC+ G + GK G
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G ++ A+ + D S W LL
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALL 695
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 201/396 (50%), Gaps = 13/396 (3%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K +H ++ G + + L+ +Y GD+ +R FD +P++D +WN+MIS Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 276 NGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
NG + + + F + V + PDF T V+ A + D GR +H + K+GF +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVF 251
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V LI MY FG +F M +D+ SW MIS + +A++ M EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ +T+ S+L C LG++ + +H ++ GL + ++N LI+MY+K ++ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+ F Q+ +V+SW SII N+ A FF KM LN +P+ +TLVS+ S A+
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 514 ALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILL 571
+ +H +R G + D + NA++DMY + G + A F +DV +WN L+
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491
Query: 572 TGYAERGQGALAEEFFRKM------IDSKGNWRKLM 601
TGYA+ G + A E ++ M I ++G W ++
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 527
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L NG+ QAL LD M+ I ++ +V+++ +C + +H V K
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK 344
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA ++M+ KFG+L A F +M D+ SWN +I Y + A
Sbjct: 345 HGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGF 404
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMY 242
+ +M + G +PD+ T + D K + VH ++R G+ DV + NA++ MY
Sbjct: 405 FVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G L A VF+ + +D ISWN +I+GY +NG + + ++ MM E + P+ T
Sbjct: 464 AKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A VG + G +HG VIK DV V LI +Y G + +F ++
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V+W +ISC+ +K ++ + M EG PD +T S+LSAC+ G ++ G
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+L G+ + ++D+ + ++ A +P + W +++ R++
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIH 701
>gi|357145591|ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Brachypodium distachyon]
Length = 618
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 313/594 (52%), Gaps = 27/594 (4%)
Query: 3 MAFCAKTSQTPLRQNLRNPKTRIPETSFYFKPKTR-HFSSKNAQSVQVLNTQNTSSIATK 61
M FC S P + R P +R ++SF + ++ SK A+ S TK
Sbjct: 1 MLFCCSPS-PPGIETYRLPPSR--QSSFLRRAQSSGEHKSKKAEHQYF----RAPSFRTK 53
Query: 62 NPNSRLNELCLNG--SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
+ + ++ L +G EQ DS D +AL +L+R C D+ +H+
Sbjct: 54 DQSLQVQSLPDDGYGPAEQ-----DSEGNSPGSPDAEALASLLRSCG---SVDDVRRVHA 105
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ ++ + + N ++ + +F ++ A VF +M D+ + SW +I GY K+G ++E
Sbjct: 106 ISVRSPDGPGMFVANNLINAYARFHEISDARKVFDEMPDKSVVSWTAIINGYQKSGNYNE 165
Query: 180 ALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+ L+ M VG GV+ + TF C+L++CG + K G++VH V++ G+ ++V + +A+
Sbjct: 166 VVRLFLDM--VGSGVRGNSLTFVCLLKSCGEQCNTKLGRQVHCCVVKGGW-SNVIMDSAV 222
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y +CG + A +FD M RD ISW MI+ Y ++G K L +F +M P+
Sbjct: 223 VHFYAQCGHIASASTMFDKMASRDVISWTTMITAYVQHGRGDKALEMFSVMVSEGYYPNE 282
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T+ S++ A + G+++HG ++K + DD+ V + L+ MY G + + VF +
Sbjct: 283 FTVCSILKACSDEKAFRFGKQLHGAIVKKLYKDDIHVGSALVTMYARLGEVFDAQAVFDK 342
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M ++ ++WT+MIS Y S +KA+ +Q M+ + +TI +LSAC + +L LG
Sbjct: 343 MARRNTITWTSMISGYAQSGHGEKAILLFQNMKMRRVSINNLTIVGLLSACGSIQSLRLG 402
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+LH ++ + + I +TL+ Y KC A + +PD++ ISWT++I G
Sbjct: 403 KELHAQIIKNSIQENLQIGSTLVWCYCKCGEYTYAARILKDMPDRDAISWTAMISGYNSV 462
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ EAL M+ + +KPN+ T S L ACA++ AL G+ IH + + F+
Sbjct: 463 GHNAEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFLNVFVG 522
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++L+DMY+RCG + A F++ E ++ W +++TG+A+ G L EE F+ M
Sbjct: 523 SSLIDMYMRCGNVDDARRVFDAMPEHNLVTWKVIITGFAQNG---LCEEAFKYM 573
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 213/416 (51%), Gaps = 3/416 (0%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
V L++ C + G +H V K +V + +A + + + G + A +F KM
Sbjct: 185 FVCLLKSCGEQCNTKLGRQVHCCVVKG-GWSNVIMDSAVVHFYAQCGHIASASTMFDKMA 243
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD+ SW +I Y + G D+AL ++ M G P+ +T +L+ C + GK
Sbjct: 244 SRDVISWTTMITAYVQHGRGDKALEMFSVMV-SEGYYPNEFTVCSILKACSDEKAFRFGK 302
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H +++ Y+ D+ V +AL+TMY + G++ A+ VFD M +R+ I+W +MISGY ++G
Sbjct: 303 QLHGAIVKKLYKDDIHVGSALVTMYARLGEVFDAQAVFDKMARRNTITWTSMISGYAQSG 362
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
K ++LF M+ V + +T+ ++SA + +LG+E+H +IK +++ + +
Sbjct: 363 HGEKAILLFQNMKMRRVSINNLTIVGLLSACGSIQSLRLGKELHAQIIKNSIQENLQIGS 422
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ Y G ++ M +D +SWT MIS Y +A+++ M +G P
Sbjct: 423 TLVWCYCKCGEYTYAARILKDMPDRDAISWTAMISGYNSVGHNAEALKSLDDMLWDGVKP 482
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T +S L ACA L L G ++H + +T + + ++LIDMY +C +D A VF
Sbjct: 483 NTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFLNVFVGSSLIDMYMRCGNVDDARRVF 542
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARI 512
+P+ N+++W II G N EA + M + L +L++C +
Sbjct: 543 DAMPEHNLVTWKVIITGFAQNGLCEEAFKYMYLMQQEGHDVDDFVLSKVLTSCGDL 598
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++AL+ M +E + ++++ C ++ + G LH + K + + +
Sbjct: 260 HGRGDKALEMFSVMVSEGYYPNEFTVCSILKACSDEKAFRFGKQLHGAIVKKLYKDDIHV 319
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF KM R+ +W +I GYA++G ++A+ L+Q M +
Sbjct: 320 GSALVTMYARLGEVFDAQAVFDKMARRNTITWTSMISGYAQSGHGEKAILLFQNMK-MRR 378
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + L+ GKE+H +I+ + ++ + + L+ Y KCG+ A
Sbjct: 379 VSINNLTIVGLLSACGSIQSLRLGKELHAQIIKNSIQENLQIGSTLVWCYCKCGEYTYAA 438
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ MP RD ISW AMISGY G + L M V P+ T SS + A +
Sbjct: 439 RILKDMPDRDAISWTAMISGYNSVGHNAEALKSLDDMLWDGVKPNTYTYSSALKACAKLE 498
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR +HG V K +V V + LI MY+ GN ++ +VF M ++V+W +I+
Sbjct: 499 ALQDGRRIHGVVNKTPAFLNVFVGSSLIDMYMRCGNVDDARRVFDAMPEHNLVTWKVIIT 558
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ + L ++A + +M+ EG D+ ++ VL++C L
Sbjct: 559 GFAQNGLCEEAFKYMYLMQQEGHDVDDFVLSKVLTSCGDL 598
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 119/218 (54%), Gaps = 10/218 (4%)
Query: 379 LPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
LPD + ++EG+ P D +AS+L +C G++D ++H +++R+ +
Sbjct: 62 LPDDGYGPAEQ-DSEGNSPGSPDAEALASLLRSC---GSVDDVRRVHAISVRSPDGPGMF 117
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+AN LI+ Y++ I A +VF ++PDK+V+SWT+II G + + E + F M+
Sbjct: 118 VANNLINAYARFHEISDARKVFDEMPDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVGSG 177
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ NS+T V +L +C G+++H ++ G + + + +A++ Y +CG + A
Sbjct: 178 VRGNSLTFVCLLKSCGEQCNTKLGRQVHCCVVKGGWS-NVIMDSAVVHFYAQCGHIASAS 236
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ RDV +W ++T Y + G+G A E F M+
Sbjct: 237 TMFDKMASRDVISWTTMITAYVQHGRGDKALEMFSVMV 274
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P++ L S+L +C + + + +HA ++R F+ N L++ Y R + A
Sbjct: 82 PDAEALASLLRSCGSVDDV---RRVHAISVRSPDGPGMFVANNLINAYARFHEISDARKV 138
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ++ V +W ++ GY + G F M+ S +GN + L + C
Sbjct: 139 FDEMPDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVGSGVRGNSLTFVCLLKSC 192
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 280/522 (53%), Gaps = 3/522 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL + M N+ D+ +++ C +H + H+ + +G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + ++ G + A Y+F ++ RD WNV++ GY K G F+ AL +Q M V
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEM-RNSCV 274
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ +F C+L C ++ G ++H VIR G+E+D V N +ITMY KCG+L AR
Sbjct: 275 KPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARK 334
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MP+ D ++WN +I+GY +NG + + LF M V D +T +S + + G
Sbjct: 335 IFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGS 394
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K +EVH Y+++ G DV + + L+ +Y G+ E K F + DV T MIS
Sbjct: 395 LKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISG 454
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + L +A+ ++ + EG +P+ +T+ASVL ACA L +L LG +LH ++ GL +
Sbjct: 455 YVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENV 514
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +++ MY+K +D A + F ++P K+ + W +I+ N + A+ FR+M
Sbjct: 515 CQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGT 574
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ K +SV+L + LSACA AL GKE+H +R D F+ + L+DMY +CG++
Sbjct: 575 SGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLAL 634
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A + F+ + ++ +WN ++ Y G+ + F +M+++
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 266/545 (48%), Gaps = 21/545 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDAL--VNLVRLCEWKRGYDEGLYLHSVV 121
N LN NG AL M+ N CV +++ V L+ +C + G+ LH +V
Sbjct: 247 NVMLNGYVKNGDFNSALGTFQEMR--NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLV 304
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
++ + N ++M+ K G+L A +F M D +WN LI GY + GF DEA+
Sbjct: 305 IRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAV 364
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+L++ M GVK D TF L + LK KEVH +++R G DV + +AL+ +
Sbjct: 365 ALFKAMV-TSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI 423
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K GD+ A F D AMISGY NG ++ L LF + + + P+ +T+
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV+ A + KLG+E+H ++K G + V + + MY G + + F RM
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV 543
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD V W MI + + P+ A++ ++ M G+ D +++++ LSACA L G +L
Sbjct: 544 KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R IS +A+TLIDMYSKC + A VF + KN +SW SII + R
Sbjct: 604 HCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL-------MCGKEIHAHALRIGVAFD 533
E L F +M+ ++P+ VT + I+SAC G + C E + R+ +
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARM----E 719
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F ++D+Y R GR+ A++ S D W LL G LA+ + ++
Sbjct: 720 HF--ACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLV 777
Query: 592 DSKGN 596
+ N
Sbjct: 778 ELDPN 782
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 191/378 (50%), Gaps = 2/378 (0%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+++H V+ G + + + ++ MYV C +F + + WN +I G+
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + LM F M V PD T VI A + + L + VH MGF D+ +
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ LIK+Y G + + +F + +D + W M++ Y + + A+ T+Q M
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P+ ++ +LS CA G + GI+LH L +R+G S +ANT+I MYSKC + A ++
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F +P + ++W +I G N + EA+ F+ M+ + +K +S+T S L + + G+L
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGY 574
KE+H++ +R GV FD +L +AL+D+Y + G ++ A F N DV+ +++GY
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455
Query: 575 AERGQGALAEEFFRKMID 592
G A FR +I
Sbjct: 456 VLNGLNVEALNLFRWLIQ 473
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 185/393 (47%), Gaps = 4/393 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS + + V L +A + ++ K GD+ A F + D+ +I GY G
Sbjct: 401 VHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGL 460
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL+L++ + G V P+ T VL C + LK GKE+H +++ G E V +
Sbjct: 461 NVEALNLFRWLIQEGMV-PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGS 519
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
++ MY K G L A F MP +D + WN MI + +NG+ + LF M
Sbjct: 520 SITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF 579
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D ++LS+ +SA G+E+H +V++ F D V + LI MY G VF
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF 639
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M+ K+ VSW ++I+ Y P + ++ + M G PD +T ++SAC G +D
Sbjct: 640 DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVD 699
Query: 417 LGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
GI + + G+ + + ++D+Y + + +A + +P + +W S++
Sbjct: 700 EGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGA 759
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
RL+ + E K ++ L PN+ +LS
Sbjct: 760 CRLHG-NVELAKLASKHLVELDPNNSGYYVLLS 791
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 260/482 (53%), Gaps = 15/482 (3%)
Query: 121 VSKTMSHLSVRLGNA--------FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
V+K + L + LG A ++++ GDL + F + +++FSWN ++ Y
Sbjct: 66 VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYV 125
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G + +++ + + GV+PD YTFP VL+ C + D G+++H V++ G+E DV
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDV 182
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V +LI +Y + G + A VF MP RD SWNAMISG+ +NG + L + M+
Sbjct: 183 YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTE 242
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V D +T+SS++ D G VH YVIK G DV V N LI MY FG ++
Sbjct: 243 EVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDA 302
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++VF ME +D+VSW ++I+ YE + P A+ ++ M G PD +T+ S+ S L
Sbjct: 303 QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362
Query: 413 GNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ +G +H +R + I+I N L++MY+K ID A VF Q+P ++VISW ++
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422
Query: 472 ILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
I G N + EA+ + M + PN T VSIL A + +GAL G +IH ++
Sbjct: 423 ITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNC 482
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFR 588
+ D F+ L+DMY +CGR++ A + F ++ S WN +++ G G A + F+
Sbjct: 483 LFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFK 542
Query: 589 KM 590
M
Sbjct: 543 DM 544
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 258/481 (53%), Gaps = 15/481 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H V K V + + + ++ +FG + A VF M RD+ SWN +I G+
Sbjct: 165 DGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFC 224
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G EAL + RM VK D T +L C D+ G VH++VI+ G E+DV
Sbjct: 225 QNGNVAEALRVLDRMK-TEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDV 283
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY K G L A+ VFDGM RD +SWN++I+ Y +N + + L F M V
Sbjct: 284 FVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFV 343
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREE 351
+ PD +T+ S+ S + D ++GR VHG+V++ + + D+ + N L+ MY G+ +
Sbjct: 344 GMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDC 403
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSAC 409
VF ++ S+DV+SW T+I+ Y + L +A++ Y MME EG +P++ T S+L A
Sbjct: 404 ARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMME-EGRTIVPNQGTWVSILPAY 462
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ +G L G+K+H ++ L + +A LIDMY KC ++ A+ +F++IP + + W
Sbjct: 463 SHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWN 522
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAH 524
+II L ++ +AL F+ M + +K + +T VS+LSAC+ G A C +
Sbjct: 523 AIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKE 582
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGAL 582
RI + ++D++ R G ++ A+N ++ + D S W LL G L
Sbjct: 583 -YRIKPNLKHY--GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAEL 639
Query: 583 A 583
Sbjct: 640 G 640
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 217/417 (52%), Gaps = 20/417 (4%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
F V R+C ++ K++H ++ G DV ++ L+T+Y GDL + F +
Sbjct: 54 FNLVFRSC---TNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGR 318
+++ SWN+M+S Y G Y + + + V PDF T V+ A + D G
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GE 167
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEG 376
++H +V+KMGF DV V LI +Y FG E KVF M +DV SW MIS C G
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+V +A+ M+ E D +T++S+L CA ++ G+ +H ++ GL S + +
Sbjct: 228 NVA--EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFV 285
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+N LI+MYSK + A VF + ++++SW SII N+ AL FF++M+ + +
Sbjct: 286 SNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGM 345
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAW 554
+P+ +T+VS+ S ++ G+ +H +R + D + NAL++MY + G + A
Sbjct: 346 RPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCAR 405
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFF------RKMIDSKGNWRKLMGLF 604
F RDV +WN L+TGYA+ G + A + + R ++ ++G W ++ +
Sbjct: 406 AVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAY 462
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 225/452 (49%), Gaps = 14/452 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C NG++ +AL+ LD M+ + +D + +++ +C G+ +H V K
Sbjct: 217 NAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK 276
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + NA ++M+ KFG L A VF M RDL SWN +I Y + AL
Sbjct: 277 HGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGF 336
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMY 242
++ M +V G++PD+ T + G + D + G+ VH V+R + E D+ + NAL+ MY
Sbjct: 337 FKEMLFV-GMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMY 395
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-VLVDPDFMTL 301
K G + AR VF+ +P RD ISWN +I+GY +NG + + + MM E + P+ T
Sbjct: 396 AKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTW 455
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A VG + G ++HG +IK DV V LI MY G E+ +F +
Sbjct: 456 VSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQ 515
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V W +IS +KA++ ++ M A+G D IT S+LSAC+ G +D
Sbjct: 516 ETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEA--- 572
Query: 422 HQLAMRTGLISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGL 475
Q T Y I N ++D++ + ++KA + +P + S W +++
Sbjct: 573 -QWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAAC 631
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
R++ + E F +L + +V +LS
Sbjct: 632 RIHGNA-ELGTFASDRLLEVDSENVGYYVLLS 662
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 257/462 (55%), Gaps = 9/462 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L F G + A +F +M D F WNV+I G+ G + EAL LY RM + GVK D
Sbjct: 67 LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVF-SGVKAD 125
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T+P V+++ G+ L+ GK++H VI+ + +DV V N+LI++Y+K G A VF+
Sbjct: 126 SFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFE 185
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP+RD +SWN+MISGY + + LMLF M + PD + S + A V +
Sbjct: 186 EMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNM 245
Query: 317 GREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY- 374
G+E+H + ++ + DV V ++ MY +G E++F + +++V+W +I CY
Sbjct: 246 GKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYA 305
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S + D + +M E G PD IT+ ++L ACA L G +H AMR G + +I
Sbjct: 306 RNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHI 361
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
++ LIDMY + + A +F +I +KN+ISW SII N +++ AL F+K+
Sbjct: 362 VLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDS 421
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+L P+S T+ SIL A A +L G++IHA+ ++ + + N+L+ MY CG ++ A
Sbjct: 422 SLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDA 481
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
FN +DV +WN ++ YA G G ++ F +MI SK
Sbjct: 482 RKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASK 523
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 234/452 (51%), Gaps = 21/452 (4%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+EG +H++V K V + N+ +S+++K G A VF +M +RD+ SWN +I GY
Sbjct: 143 EEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGY 202
Query: 172 A--KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+ GF +L L++ M G KPD ++ L C V GKE+H H +R E
Sbjct: 203 LALEDGF--RSLMLFKEMLKFG-FKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIE 259
Query: 230 -ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
DV V+ +++ MY K G++ A +F + +R+ ++WN +I Y N + F
Sbjct: 260 TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQK 319
Query: 289 MREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M E + PD +TL +++ A ++ GR +HGY ++ GF + + LI MY +G
Sbjct: 320 MSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEWG 375
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E +F R+ K+++SW ++I+ Y + A+E +Q + +PD TIAS+L
Sbjct: 376 QLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILP 435
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A A +L G ++H +++ S II N+L+ MY+ C ++ A + F+ + K+V+S
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVS 495
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI----- 521
W SII+ ++ ++ F +M+ + + PN T S+L+AC+ G + G E
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMK 555
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ + G+ G+ +LD+ R G A
Sbjct: 556 REYGIDPGIEHYGY----MLDLIGRTGNFSSA 583
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 3/252 (1%)
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E+ ++F M D W MI + L +A++ Y M G D T V+
Sbjct: 74 GLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVI 133
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ + +L+ G K+H + ++ +S + + N+LI +Y K C A +VF ++P+++++
Sbjct: 134 KSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIV 193
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW S+I G F +L+ F++M+ KP+ + +S L AC+ + + GKE+H HA
Sbjct: 194 SWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHA 253
Query: 526 LRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALA 583
+R + D + ++LDMY + G + A F +R++ AWN+L+ YA + A
Sbjct: 254 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDA 313
Query: 584 EEFFRKMIDSKG 595
F+KM + G
Sbjct: 314 FLCFQKMSEQNG 325
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 58 IATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
IA KN NS + NG AL+ + + ++ D + +++ EG
Sbjct: 387 IAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEG 446
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H+ + K+ + + N+ + M+ GDL A F + +D+ SWN +I YA
Sbjct: 447 RQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVH 506
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVD 233
GF ++ L+ M V P+ TF +L C + G E + R +G + ++
Sbjct: 507 GFGRISVCLFSEMI-ASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 565
Query: 234 VVNALITMYVKCGDLVRARLVFDGMP 259
++ + + G+ A+ MP
Sbjct: 566 HYGYMLDLIGRTGNFSSAKRFIREMP 591
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 260/481 (54%), Gaps = 4/481 (0%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D+GL LH+ + V GN ++ + G A VF +M +RD+ SWN L+ +
Sbjct: 136 DKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAF 195
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
G F +A M G +V + V+ CG + K G +H ++ G
Sbjct: 196 LVNGMFHDARRALVSMM-RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTM 254
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V++ NAL+ MY K GD+ + VFDGM +++ +SWN+ I + G Y L +F M E
Sbjct: 255 VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSE 314
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V P +TLSS++ A +G LGREVHGY IK D+ V N L+ MY FG+ E+
Sbjct: 315 HNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEK 374
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F +M+ ++VVSW MI+ + +A M+ G P+ IT+ +VL ACA
Sbjct: 375 ASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR 434
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ +L +G ++H ++R GL+ + I+N LIDMYSKC + A +F + +K+ +S+ ++
Sbjct: 435 MASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTL 493
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
ILG + FE+L+ F++M + + ++V+ + LSAC + GKEIH +R +
Sbjct: 494 ILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLL 553
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ FL N+LLD+Y + G + A FN ++DV++WN ++ GY GQ +A E F
Sbjct: 554 SGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFEL 613
Query: 590 M 590
M
Sbjct: 614 M 614
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 248/463 (53%), Gaps = 7/463 (1%)
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF--GKMCDRDLFSWNVLIGGYAKAGF 176
S+VS ++ S+ L A L + DL A V + R F WN L + A
Sbjct: 39 SLVSGALA-TSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASL 97
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL--KRGKEVHVHVIRFGYEADVDV 234
EAL +Y M V+PD TFP L +G E+H +R G+ ADV
Sbjct: 98 PSEALRVYNLML-RSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFT 156
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N L+ Y CG AR VFD MP+RD +SWN+++S + NG + + M
Sbjct: 157 GNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGF 216
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ +L SV+ A +EK G +H +K+G + V++ N L+ MY FG+ E +
Sbjct: 217 PLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQ 276
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M ++ VSW + I C+ + + ++ M MP IT++S+L A LG+
Sbjct: 277 VFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGS 336
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
DLG ++H +++ + I +AN+L+DMY+K ++KA +F Q+ D+NV+SW ++I
Sbjct: 337 FDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIAN 396
Query: 475 LRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
L N EA M + + PNS+TLV++L ACAR+ +L GK+IHA ++R G+ FD
Sbjct: 397 LVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFD 456
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAE 576
F+ NAL+DMY +CG++ A N F +E+D ++N L+ GY++
Sbjct: 457 LFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQ 499
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 251/488 (51%), Gaps = 3/488 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +NG A + L SM ++ +LV++V C ++ GL +H++ K
Sbjct: 189 NSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVK 248
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V L NA + M+ KFGD+ + VF M +++ SWN IG + AGF+ + L +
Sbjct: 249 VGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRM 308
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M V P T +L + G+EVH + I+ + D+ V N+L+ MY
Sbjct: 309 FRKMS-EHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 367
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L +A +F+ M R+ +SWNAMI+ +NG + L M++ P+ +TL +
Sbjct: 368 KFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVN 427
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + K+G+++H + I+ G D+ + N LI MY G +F R E KD
Sbjct: 428 VLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSE-KD 486
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ T+I Y S +++ ++ M + G D ++ LSAC L G ++H
Sbjct: 487 DVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHC 546
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +R L + ++N+L+D+Y+K + A ++F++I K+V SW ++ILG ++ +
Sbjct: 547 VLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDI 606
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F M + L + V+ +++L+AC+ G + GK+ + + + ++D
Sbjct: 607 AFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVD 666
Query: 543 MYVRCGRM 550
+ R G++
Sbjct: 667 LLGRAGQL 674
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 4/419 (0%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L+ M E N+ L +L+ +D G +H K L + + N+ + M
Sbjct: 306 LRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDM 365
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ KFG L A +F +M DR++ SWN +I + G EA L M G P+ T
Sbjct: 366 YAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDM-QKSGECPNSIT 424
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
VL C + LK GK++H IR G D+ + NALI MY KCG L AR +F+
Sbjct: 425 LVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RS 483
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
++D +S+N +I GY ++ + L+LF MR V +D D ++ +SA + K G+E
Sbjct: 484 EKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKE 543
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H +++ S + N L+ +Y G K+F+++ KDV SW TMI Y
Sbjct: 544 IHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQ 603
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
D A E +++M+ +G D ++ +VL+AC+ G +D G K + + +
Sbjct: 604 IDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYAC 663
Query: 440 LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++D+ + + K E+ +P N W +++ R++ + E + + + LKP
Sbjct: 664 MVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHG-NIELAQWAAEHLFELKP 721
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 254/460 (55%), Gaps = 8/460 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A VF + + SW +++ +A+ G + EAL Y+RM + G++PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMV-LEGLRPDGA 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDG 257
F + C DLK+G+ +H ++ E D+ + ALITMY +C DL AR FD
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDE 314
M K+ ++WNA+I+GY NG++ L ++ + + PD +T SS + A +VGD
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
GRE+ + G++ D V N LI MY G+ E KVF R++++DV++W TMIS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A+E +Q M P+ +T +L+AC L +L+ G +H+ G S +
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 435 IIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+I N L++MY+KC +++A +VF ++ ++VI+W +I+ ++ +AL F++M L
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N+ PN +TL ++LSACA +GA GK +HA D L N+L++MY RCG +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F + ++ + +W+ L+ YA+ G E F +++
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 271/532 (50%), Gaps = 21/532 (3%)
Query: 59 ATKNPNSR-----LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
A ++PNS + NG +AL Y M + D V + +C + +
Sbjct: 17 AIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQ 76
Query: 114 GLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH+++ +T + + LG A ++M+ + DL A F +M + L +WN LI GY+
Sbjct: 77 GQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ G AL +YQ M G+KPD TF L C V D+ +G+E+ + GY +
Sbjct: 137 RNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYAS 196
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D V NALI MY KCG L AR VFD + RD I+WN MISGY + G + L LF M
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMG 256
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR- 349
P+ +T +++A + D + GR +H V + G+ D+ + N L+ MY +
Sbjct: 257 PNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSL 316
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE +VF R+ ++DV++W +I Y A++ ++ M+ E P+EIT+++VLSAC
Sbjct: 317 EEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSAC 376
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LG G +H L + +++ N+L++MY++C +D + VF I DK+++SW+
Sbjct: 377 AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWS 436
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I + S L F +++ L + VT+VS LSAC+ G L G +
Sbjct: 437 TLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG----VQSFLS 492
Query: 529 GVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
V G P+ ++D+ R GR++ A N + D AW LL+G
Sbjct: 493 MVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 204/377 (54%), Gaps = 4/377 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M+ K G L A VF ++ +RD+ +WN +I GYAK G +AL L+QRM
Sbjct: 202 NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRM-GPNDP 260
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD-LVRAR 252
KP+V TF +L C + DL++G+ +H V GYE+D+ + N L+ MY KC L AR
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEAR 320
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + RD I+WN +I Y + G+ L +F M+ V P+ +TLS+V+SA ++G
Sbjct: 321 QVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++ G+ VH + DV + N L+ MY G+ ++ VF+ + K +VSW+T+I+
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y +E + + EG D++T+ S LSAC+ G L G++ + GL
Sbjct: 441 AYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLA 500
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
++D+ S+ ++ A + H +P + ++WTS++ G +L+N + A K
Sbjct: 501 PDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADK 560
Query: 491 MMLNLKPNSVTLVSILS 507
+ + + V++LS
Sbjct: 561 LFELESEDEHSTVTLLS 577
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + VF +E + VSWT +++ + + +A+ Y+ M EG PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQI 460
+ C+ +L G LH + + T L+ + II+ LI MY++C+ ++ A + F ++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN----LKPNSVTLVSILSACARIGALM 516
K +++W ++I G N AL ++ M+ +KP+++T S L AC+ +G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+EI A + G A D + NAL++MY +CG ++ A F+ RDV AWN +++GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 576 ERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
++G A E F++M D K N +GL C
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/460 (32%), Positives = 261/460 (56%), Gaps = 9/460 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R L+ WN L+ ++ +++ + + +MF KPD +T P L+ CG + ++K
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFR-DEEKPDNFTLPVALKACGELREVKY 59
Query: 216 GKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ +H + + +D+ V ++LI MYVKCG + A +F+ + K D ++W++M+SG+
Sbjct: 60 GEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFE 119
Query: 275 ENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + + F M V PD +TL +++SA + + +LGR VHG+V++ GFS+D+
Sbjct: 120 KNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL 179
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
S+ N L+ Y +E +F M KDV+SW+T+I+CY + +A+ + M +
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDD 239
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G+ P+ T+ VL ACA +L+ G K H+LA+R GL + + ++ L+DMY KC ++A
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACAR 511
VF +IP K+V+SW ++I G LN + ++ F M+L N +P+++ ++ +L +C+
Sbjct: 300 YAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSE 359
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+G L + H++ ++ G + F+ +L+++Y RCG + A FN +D W L
Sbjct: 360 LGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSL 419
Query: 571 LTGYAERGQGALAEEFFRKMIDS---KGNWRKLMGLFRKC 607
+TGY G+G A E F M+ S K N + + C
Sbjct: 420 ITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSAC 459
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 252/497 (50%), Gaps = 9/497 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L + EQ + + M D L ++ C R G +H + K
Sbjct: 10 NTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLKK 69
Query: 124 TMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ S + +G++ + M+VK G + A +F ++ D+ +W+ ++ G+ K G +A+
Sbjct: 70 NVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVE 129
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++RM V PD T ++ C + + + G+ VH V+R G+ D+ +VN+L+ Y
Sbjct: 130 FFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCY 189
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K A +F M ++D ISW+ +I+ Y +NG + L +F M + +P+ T+
Sbjct: 190 AKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVL 249
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+ A D + GR+ H I+ G +V V L+ MY+ + EE VFSR+ K
Sbjct: 250 CVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKK 309
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKL 421
DVVSW +IS + + + +++E + +M E + PD I + VL +C+ LG L
Sbjct: 310 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECF 369
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G S I +L+++YS+C + A +VF++I K+ + WTS+I G ++ +
Sbjct: 370 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKG 429
Query: 482 FEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFL 536
+AL F M+ + +KPN VT +SILSAC+ G + G E+ + R+ + +
Sbjct: 430 TKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYA 489
Query: 537 PNALLDMYVRCGRMKPA 553
L+D+ R G + A
Sbjct: 490 --VLVDLLGRVGELDTA 504
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 206/413 (49%), Gaps = 17/413 (4%)
Query: 73 NGSLEQALKYLDSMQEL-NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NGS QA+++ M ++ D L+ LV C G +H V + +
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ L+ + K A +F M ++D+ SW+ +I Y + G EAL ++ M
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMI-DD 239
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+V T CVL+ C DL++G++ H IR G E +V V AL+ MY+KC A
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASEL 310
VF +PK+D +SW A+ISG+ NG + + F IM+ E PD + + V+ +
Sbjct: 300 YAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSE 359
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G K H YVIK GF + + L+++Y G+ KVF+ + KD V WT++
Sbjct: 360 LGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSL 419
Query: 371 ISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
I+ Y KA+ET+ M+ + P+E+T S+LSAC+ G + G+++ +L +
Sbjct: 420 ITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVN-- 477
Query: 430 LISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
Y + N L+D+ + +D A+E+ ++P S T ILG L
Sbjct: 478 --DYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMP----FSPTPQILGTLL 524
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 264/520 (50%), Gaps = 3/520 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL + M D+ +++ C G +H + L V +G
Sbjct: 126 GQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG 185
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + + + G + A Y+F +M +D WNV++ GY K G +D A ++ M
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE-T 244
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF CVL C + G ++H V+ G E D V N L+ MY KCG L AR
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARR 304
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MPK D ++WN MISGY +NG + LF M + PD +T SS +
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGAT 364
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+E+H Y+I+ G S DV + + LI +Y + E K+F + D+V T MIS
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISG 424
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + + A+E ++ + E + +T+ASVL ACA L L LG +LH ++ G
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + ++DMY+KC +D A + F I DK+ + W S+I N + EA+ FR+M M
Sbjct: 485 CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
K + V++ + LSACA + AL GKEIHA +R D F +AL+DMY +CG +
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F++ E++ +WN ++ Y G+ + F M+
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGML 644
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 259/537 (48%), Gaps = 13/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN NG + A M+ + ++ +C + + G LH +V
Sbjct: 217 NVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVS 276
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N L+M+ K G L A +F M DL +WN +I GY + GF DEA L
Sbjct: 277 SGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCL 336
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +KPD TF L L++GKE+H ++IR G DV + +ALI +Y
Sbjct: 337 FHEMI-SARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D+ AR +FD D + AMISGY NG L +F + + + + +TL+S
Sbjct: 396 KCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 455
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + LG+E+HG+++K G V + ++ MY G + + F + KD
Sbjct: 456 VLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKD 515
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W +MI+ + P++A++ ++ M G+ D ++I++ LSACA L L G ++H
Sbjct: 516 AVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHA 575
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
MR S + + LIDMYSKC +D A VF + +KN +SW SII + R +
Sbjct: 576 FMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKD 635
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN---- 538
+L F M+ + ++P+ VT ++I+SAC G + G H R G +
Sbjct: 636 SLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG----IHYFRCMTEELGIMARMEHY 691
Query: 539 -ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D++ R GR+ A+ NS D W LL G LAE R + D
Sbjct: 692 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 748
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 194/394 (49%), Gaps = 2/394 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+TC L +G++ H ++ G + + L+ MYV CG + A+ +F +
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN MI G+ G++ L+ + M PD T VI A + LGR VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ MGF DV V + LIK Y G + +F RM SKD V W M++ Y + D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A + M + P+ +T A VLS CA ++ G +LH L + +GL +ANTL+
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MY+KC + A +F +P ++++W +I G N EA F +M+ +KP+S+T
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSIT 351
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
S L + L GKEIH + +R GV+ D FL +AL+D+Y +C ++ A F+
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRT 411
Query: 562 R-DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
D+ +++GY G A E FR ++ +
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ S+L C L G + H + G+ I+ L+ MY C A +F+Q+
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
W +I G + + AL+F+ KM+ P+ T ++ AC + ++ G+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+H +G D F+ ++L+ Y G + A F+ +D WN++L GY + G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 580 GALAEEFFRKMIDSKGN 596
A F +M ++ N
Sbjct: 229 WDNATGVFMEMRRTETN 245
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 275/527 (52%), Gaps = 7/527 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A++ M+ +C +E AL +++ R G +H++ T V +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A VF + +R+ SWN L+ Y K +A+ ++ M W
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-S 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P + F CV+ C G +++ G++VH V+R GY+ DV NAL+ MY+K G + A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++F+ MP D +SWNA+ISG NG + + L + M+ + P+ TLSS++ A
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++HG++IK D + L+ MY ++ KVF M +D++ +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S D+A+ + + EG + T+A+VL + A L ++H LA++ G I
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N LID Y KC C+ A VF + ++I+ TS+I L + A+ F +M
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L+P+ L S+L+ACA + A GK++HAH ++ D F NAL+ Y +CG +
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+ A F+S ER V +W+ ++ G A+ G G A E F +M+D N
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 603
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 234/475 (49%), Gaps = 5/475 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R + G +H++V + V NA + M++K G + A +F KM D D
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G G A+ L +M + G V P+V+T +L+ C G G+++H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLV-PNVFTLSSILKACSGAGAFDLGRQIH 326
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ ++D + L+ MY K L AR VFD M RD I NA+ISG G +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF +R+ + + TL++V+ ++ + R+VH +K+GF D V N LI
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y + +VF S D+++ T+MI+ + A++ + M +G PD
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++S+L+ACA L + G ++H ++ +S N L+ Y+KC I+ A F +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P++ V+SW+++I GL + AL F +M+ + PN +T+ S+L AC G + K
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 520 E-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++ G+ + ++D+ R G++ A NS + + S W LL
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 189/378 (50%), Gaps = 8/378 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H +++ G A N LI+ Y KC AR VFD +P +SW+++++ Y
Sbjct: 23 GAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + F MR V + L V+ + V D +LG +VH + GF DV V
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFV 137
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N L+ MY FG ++ +VF+ +S ++ VSW ++S Y + A++ + M G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P E + V++AC N++ G ++H + +R G + AN L+DMY K +D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+F ++PD +V+SW ++I G LN A+ +M + L PN TL SIL AC+ G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLT 572
A G++IH ++ D ++ L+DMY + + A F+ RD+ N L++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 573 GYAERGQGALAEEFFRKM 590
G + G+ A F ++
Sbjct: 378 GCSHGGRHDEALSLFYEL 395
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG +A++ L M+ + + L ++++ C +D G +H + K
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K L A VF M RDL N LI G + G DEALSL
Sbjct: 332 ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSL 391
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + G+ + T VL++ + ++VH ++ G+ D VVN LI Y
Sbjct: 392 FYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYW 450
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC L A VF+ D I+ +MI+ + + LF+ M ++PD LSS
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + + G++VH ++IK F D N L+ Y G+ E+ E FS + +
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VVSW+ MI +A+E + M EG P+ IT+ SVL AC G +D + +
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ G+ + +ID+ + +D A+E+ + +P N W +++ R++
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 37/279 (13%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +H ++K G S N LI Y +VF + VSW+++++ Y
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ LP A++ + M AEG +E + VL C+ + LG ++H +AM TG S + +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFV 137
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
AN L+ MY +D A VF++ ++N +SW ++ N++ +A+ F +M+ +
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P +++AC + G+++HA +R+G D F NAL+DMY++ GR+
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD--- 254
Query: 555 NQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+A F KM DS
Sbjct: 255 ---------------------------IASVIFEKMPDS 266
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 275/527 (52%), Gaps = 7/527 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A++ M+ +C +E AL +++ R G +H++ T V +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A VF + +R+ SWN L+ Y K +A+ ++ M W
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW-S 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P + F CV+ C G +++ G++VH V+R GY+ DV NAL+ MY+K G + A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++F+ MP D +SWNA+ISG NG + + L + M+ + P+ TLSS++ A
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++HG++IK D + L+ MY ++ KVF M +D++ +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S D+A+ + + EG + T+A+VL + A L ++H LA++ G I
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N LID Y KC C+ A VF + ++I+ TS+I L + A+ F +M
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L+P+ L S+L+ACA + A GK++HAH ++ D F NAL+ Y +CG +
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+ A F+S ER V +W+ ++ G A+ G G A E F +M+D N
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 603
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 234/475 (49%), Gaps = 5/475 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R + G +H++V + V NA + M++K G + A +F KM D D
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G G A+ L +M + G V P+V+T +L+ C G G+++H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLV-PNVFTLSSILKACSGAGAFDLGRQIH 326
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ ++D + L+ MY K L AR VFD M RD I NA+ISG G +
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF +R+ + + TL++V+ ++ + R+VH +K+GF D V N LI
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y + +VF S D+++ T+MI+ + A++ + M +G PD
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++S+L+ACA L + G ++H ++ +S N L+ Y+KC I+ A F +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P++ V+SW+++I GL + AL F +M+ + PN +T+ S+L AC G + K
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 520 E-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++ G+ + ++D+ R G++ A NS + + S W LL
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 188/378 (49%), Gaps = 8/378 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H +++ G A N LI+ Y KC AR FD +P +SW+++++ Y
Sbjct: 23 GAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + F MR V + L V+ + V D +LG +VH + GF DV V
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFV 137
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N L+ MY FG ++ +VF+ +S ++ VSW ++S Y + A++ + M G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P E + V++AC N++ G ++H + +R G + AN L+DMY K +D A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+F ++PD +V+SW ++I G LN A+ +M + L PN TL SIL AC+ G
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLT 572
A G++IH ++ D ++ L+DMY + + A F+ RD+ N L++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 573 GYAERGQGALAEEFFRKM 590
G + G+ A F ++
Sbjct: 378 GCSHGGRHDEALSLFYEL 395
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG +A++ L M+ + + L ++++ C +D G +H + K
Sbjct: 272 NALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K L A VF M RDL N LI G + G DEALSL
Sbjct: 332 ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSL 391
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + G+ + T VL++ + ++VH ++ G+ D VVN LI Y
Sbjct: 392 FYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYW 450
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC L A VF+ D I+ +MI+ + + LF+ M ++PD LSS
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + + G++VH ++IK F D N L+ Y G+ E+ E FS + +
Sbjct: 511 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 570
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VVSW+ MI +A+E + M EG P+ IT+ SVL AC G +D + +
Sbjct: 571 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 630
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ G+ + +ID+ + +D A+E+ + +P N W +++ R++
Sbjct: 631 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 37/279 (13%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +H ++K G S N LI Y + F + VSW+++++ Y
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ LP A++ + M AEG +E + VL C+ + LG ++H +AM TG S + +
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFV 137
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
AN L+ MY +D A VF++ ++N +SW ++ N++ +A+ F +M+ +
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P +++AC + G+++HA +R+G D F NAL+DMY++ GR+
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD--- 254
Query: 555 NQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+A F KM DS
Sbjct: 255 ---------------------------IASVIFEKMPDS 266
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/595 (29%), Positives = 302/595 (50%), Gaps = 19/595 (3%)
Query: 31 YFKPKTRHFSSKN-------AQSVQVLNTQ---NTSSIATKNP-NSRLNELCLNGSLEQA 79
+F P + S KN A S LNTQ + + P + ++ LC +A
Sbjct: 22 FFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLCKKNLHREA 81
Query: 80 LKYLDSMQELNIC-VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
LK D Q+ + + +L+ C R + G +H + + L N LS
Sbjct: 82 LKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILS 141
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A +F M +++ SW +I GY++ G D A++LY +M G + PD +
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI-PDHF 200
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF ++++C G+ D K +++H HV++ + AD+ NALI+MY K + A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLG 317
+D ISW +MI+G+ + G ++ L F M+ + + P+ S SA + + G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++HG IK G D+ L MY G E VF +E D+V+W +I+ +
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
++ + M G +P+++T+ S+L AC+ L+ GI++H ++ G I +
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
N+L+ MYSKC ++ AL+VF I +K +++SW +++ N++ E L + M + +
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+ VTL ++L + +I + G +IH ++ G+ D + NAL++MY +CG ++ A
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARK 560
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
F+S D+ +W+ L+ GYA+ G G A E FR M + K N +G+ C
Sbjct: 561 MFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTAC 615
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 229/432 (53%), Gaps = 4/432 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D ++V+ C + LH+ V K+ + NA +SM+ KF + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++ +DL SW +I G+++ G+ EAL ++ M +P+ + F C + +
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G+++H I+FG +D+ +L MY KCG L AR VF + K D ++WNA+I+G+
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377
Query: 274 FENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ F MR LV D LS + + SE V G +VH Y++KMGF+ D
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH-GIQVHSYIVKMGFNLD 436
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ VCN L+ MY N + +VF + +K D+VSW T+++ + + ++M
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
A PD +T+ +VL + + + ++G ++H M++GL I ++N LI+MY+KC ++
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F I + ++ISW+S+I+G EA FR M L +KPN +T V IL+AC+
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 511 RIGALMCGKEIH 522
IG + G +++
Sbjct: 617 HIGMVEEGLKLY 628
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 189/349 (54%), Gaps = 4/349 (1%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + M+ K G L A VF + DL +WN +I G+A E+ S + +M G
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V DV T +L C L G +VH ++++ G+ D+ V N+L++MY KC +L A
Sbjct: 399 VPNDV-TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457
Query: 253 LVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ + K D +SWN +++ + + + L L +M + PD +TL++V+ +S +
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++G ++H +++K G + D+SV N LI MY G+ E K+F + + D++SW+++I
Sbjct: 518 ASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLI 577
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +A E ++ M G P+EIT +L+AC+ +G ++ G+KL++ I
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637
Query: 432 SYII-IANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
S + ++D+ ++ C+D A + Q+P +V+ W +++ +++
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVH 686
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/595 (29%), Positives = 302/595 (50%), Gaps = 19/595 (3%)
Query: 31 YFKPKTRHFSSKN-------AQSVQVLNTQ---NTSSIATKNP-NSRLNELCLNGSLEQA 79
+F P + S KN A S LNTQ + + P + ++ LC +A
Sbjct: 22 FFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLCKKNLHREA 81
Query: 80 LKYLDSMQELNIC-VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
LK D Q+ + + +L+ C R + G +H + + L N LS
Sbjct: 82 LKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILS 141
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A +F M +++ SW +I GY++ G D A++LY +M G + PD +
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI-PDHF 200
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF ++++C G+ D K +++H HV++ + AD+ NALI+MY K + A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLG 317
+D ISW +MI+G+ + G ++ L F M+ + + P+ S SA + + G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++HG IK G D+ L MY G E VF +E D+V+W +I+ +
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
++ + M G +P+++T+ S+L AC+ L+ GI++H ++ G I +
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
N+L+ MYSKC ++ AL+VF I +K +++SW +++ N++ E L + M + +
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRI 500
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+ VTL ++L + +I + G +IH ++ G+ D + NAL++MY +CG ++ A
Sbjct: 501 KPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARK 560
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
F+S D+ +W+ L+ GYA+ G G A E FR M + K N +G+ C
Sbjct: 561 MFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTAC 615
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 229/432 (53%), Gaps = 4/432 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D ++V+ C + LH+ V K+ + NA +SM+ KF + A VF
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++ +DL SW +I G+++ G+ EAL ++ M +P+ + F C + +
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G+++H I+FG +D+ +L MY KCG L AR VF + K D ++WNA+I+G+
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377
Query: 274 FENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ F MR LV D LS + + SE V G +VH Y++KMGF+ D
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH-GIQVHSYIVKMGFNLD 436
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ VCN L+ MY N + +VF + +K D+VSW T+++ + + ++M
Sbjct: 437 IPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMF 496
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
A PD +T+ +VL + + + ++G ++H M++GL I ++N LI+MY+KC ++
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F I + ++ISW+S+I+G EA FR M L +KPN +T V IL+AC+
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 511 RIGALMCGKEIH 522
IG + G +++
Sbjct: 617 HIGMVEEGLKLY 628
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 189/349 (54%), Gaps = 4/349 (1%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + M+ K G L A VF + DL +WN +I G+A E+ S + +M G
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V DV T +L C L G +VH ++++ G+ D+ V N+L++MY KC +L A
Sbjct: 399 VPNDV-TVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457
Query: 253 LVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ + K D +SWN +++ + + + L L +M + PD +TL++V+ +S +
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++G ++H +++K G + D+SV N LI MY G+ E K+F + + D++SW+++I
Sbjct: 518 ASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLI 577
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +A E ++ M G P+EIT +L+AC+ +G ++ G+KL++ I
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637
Query: 432 SYII-IANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
S + ++D+ ++ C+D A + Q+P +V+ W +++ +++
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVH 686
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 170/575 (29%), Positives = 292/575 (50%), Gaps = 13/575 (2%)
Query: 40 SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNIC---VDED 96
S++ A ++ V+ + S+ P++R + + + D +Q L +D
Sbjct: 4 STRIAANIAVVRRRWFGSLQLPVPSARFRS-----TFTRRVGANDVLQRLGEGGNHIDSR 58
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
V L + C R G + + + L++ N + ++ G++ A +F +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
++ + +WN LI GYA+ G EA +L+++M G++P + TF VL C L G
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMV-DEGLEPSIITFLSVLDACSSPAGLNWG 177
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
KEVH V+ G+ +D + AL++MYVK G + AR VFDG+ RD ++N M+ GY ++
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKS 237
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G++ K LF M++V + P+ ++ S++ G+ VH + G DD+ V
Sbjct: 238 GDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVA 297
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI+MY + G+ E +VF M+ +DVVSWT MI Y + + A + M+ EG
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD IT +++ACA NL+ ++H G + ++++ L+ MY+KC I A +V
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGAL 515
F +P ++V+SW+++I N EA F M N++P+ VT +++L+AC +GAL
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGY 574
G EI+ A++ + L NAL+ M + G ++ A F++ RDV WN ++ GY
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGY 537
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ G A F +M+ + N +G+ C
Sbjct: 538 SLHGNAREALYLFDRMLKERFRPNSVTFVGVLSAC 572
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 256/482 (53%), Gaps = 3/482 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +++A M + + ++++ C G + G +H+ V R+G
Sbjct: 137 GHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG 196
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +SM+VK G + A VF + RD+ ++NV++GGYAK+G +++A L+ RM VG +
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG-L 255
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ +F +L C L GK VH + G D+ V +LI MY CG + AR
Sbjct: 256 KPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARR 315
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M RD +SW MI GY ENG LF M+E + PD +T +++A + +
Sbjct: 316 VFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISAN 375
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
RE+H V GF D+ V L+ MY G ++ +VF M +DVVSW+ MI
Sbjct: 376 LNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGA 435
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +A ET+ +M+ PD +T ++L+AC LG LD+G++++ A++ L+S+
Sbjct: 436 YVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSH 495
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + N LI M +K +++A +F + ++VI+W ++I G L+ + EAL F +M+
Sbjct: 496 VPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLK 555
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMK 551
+PNSVT V +LSAC+R G + G+ + L G+ L ++D+ R G +
Sbjct: 556 ERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELD 615
Query: 552 PA 553
A
Sbjct: 616 EA 617
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 3/301 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG++E A +MQE I D ++++ C + +HS V + +
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G + A VF M RD+ SW+ +IG Y + G+ EA + M
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMK-RSN 456
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD T+ +L CG + L G E++ I+ + V + NALI M K G + RAR
Sbjct: 457 IEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERAR 516
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M +RD I+WNAMI GY +G + L LF M + P+ +T V+SA G
Sbjct: 517 YIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAG 576
Query: 313 DEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-WTTM 370
GR Y+++ G V + ++ + G +E E + M K S W+++
Sbjct: 577 FVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSL 636
Query: 371 I 371
+
Sbjct: 637 L 637
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 265/477 (55%), Gaps = 4/477 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
L S V K + ++ +G A + + +FG + A ++ + +WN +I GY K
Sbjct: 197 LQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILS 256
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
++EA ++ RM +G V PD +TF LR CG + GK+VH +I G++ D V N
Sbjct: 257 WEEAWGIFDRMLKIG-VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
ALI MY KC D VFD M +R++++WN++IS + G + L+LF+ M+E
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ L S++ AS + D GRE+HG++++ + D+ + + L+ MY G EE +VF
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVF 435
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNL 415
+ ++ VS+ +++ Y ++A+E Y M++E G PD+ T ++L+ CA N
Sbjct: 436 RSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRND 495
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G ++H +R + II+ L+ MYS+C ++ A E+F+++ ++N SW S+I G
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 555
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+ N + EAL F++M LN +KP+ +L S+LS+C + G+E+H +R + +G
Sbjct: 556 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 615
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L L+DMY +CG M AW ++ ++DV N++++ + G+ A+ F +M
Sbjct: 616 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM 672
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 257/497 (51%), Gaps = 40/497 (8%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G LH + + + + + LG+A + M+ K G + A VF + +R+ S+N L+ GY
Sbjct: 395 KGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYV 454
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +EAL LY M G++PD +TF +L C + +G+++H H+IR ++
Sbjct: 455 QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 514
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V L+ MY +CG L A+ +F+ M +R+ SWN+MI GY +NGE + L LF M+
Sbjct: 515 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 574
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD--------------------- 331
+ PD +LSS++S+ + D + GRE+H ++++ +
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 634
Query: 332 ----------DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
DV + N ++ +++ G + + +F +ME ++ W ++++ Y L
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKK 694
Query: 382 KAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANT 439
++ + +M+E++ D +T+ ++++ C+ L L+ G +LH L ++ G ++ +++
Sbjct: 695 ESFNHFLEMLESDIEY-DVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETA 753
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPN 498
L+DMYSKC I KA VF + KN++SW ++I G + S EALI + +M + PN
Sbjct: 754 LVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPN 813
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
VT ++ILSAC+ G + G I + ++D+ R GR++ A +F
Sbjct: 814 EVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDA-KEF 872
Query: 558 NSN---ERDVSAWNILL 571
E +VS W LL
Sbjct: 873 VEKMPIEPEVSTWGALL 889
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 278/575 (48%), Gaps = 22/575 (3%)
Query: 29 SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLN-ELCLNGSLEQALKYLDSMQ 87
++ F+P HF+ ++ +L N+ S + ++ +L NG DS +
Sbjct: 6 NYLFQPSLNHFNCHYSRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGP--------DSPK 57
Query: 88 ELNICVDEDALVN------LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+I + VN L++ C + G +H+ + + L L ++
Sbjct: 58 PTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYA 117
Query: 142 KFG---DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ G DL +A +F +M +R+L +WN +I YA+ + E L LY RM G D +
Sbjct: 118 RSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS-DKF 176
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TFP V++ C + D+ +++ V++ G ++ V AL+ Y + G + A D +
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
++WNA+I+GY + + + +F M ++ V PD T +S + + G+
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VH +I GF D V N LI MY + E KVF M ++ V+W ++IS
Sbjct: 297 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 356
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ A+ + M+ G + + S+L A A L ++ G +LH +R L S II+ +
Sbjct: 357 HFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS 416
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LK 496
L+DMYSKC +++A +VF + ++N +S+ +++ G ++ EAL + M ++
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQ 476
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T ++L+ CA G++IHAH +R + + + L+ MY CGR+ A
Sbjct: 477 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEI 536
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
FN ER+ +WN ++ GY + G+ A F++M
Sbjct: 537 FNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 202/412 (49%), Gaps = 9/412 (2%)
Query: 193 VKP--DVYTFP--CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-- 246
KP DV P +++ C +RGK +H +I GY D ++ ++ +Y + G
Sbjct: 63 TKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122
Query: 247 -DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
DL AR +F+ MP+R+ +WN MI Y +YM+ L L+ MR D T SVI
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVI 182
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + D R++ V+K G + ++ V L+ Y FG ++ +E VV
Sbjct: 183 KACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVV 242
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W +I+ Y + ++A + M G PD T AS L C L + D G ++H
Sbjct: 243 TWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKL 302
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ G + N LIDMY+KC + L+VF ++ ++N ++W SII +AL
Sbjct: 303 IACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDAL 362
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ F +M + K N L SIL A A + + G+E+H H +R + D L +AL+DMY
Sbjct: 363 VLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMY 422
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+CG ++ A F S ER+ ++N LL GY + G+ A E + M G
Sbjct: 423 SKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 254/460 (55%), Gaps = 8/460 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A VF + + SW +++ +A+ G + EAL Y+RM + G++PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMV-LEGLRPDGA 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDG 257
F + C DLK+G+ +H ++ E D+ + ALITMY +C DL AR FD
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDE 314
M K+ ++WNA+I+GY NG++ L ++ + + PD +T SS + A +VGD
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
GRE+ + G++ D V N LI MY G+ E KVF R++++DV++W TMIS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A+E +Q M P+ +T +L+AC L +L+ G +H+ G S +
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 435 IIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+I N L++MY+KC +++A +VF ++ ++VI+W +I+ ++ +AL F++M L
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N+ PN +TL ++LSACA +GA GK +HA D L N+L++MY RCG +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F + ++ + +W+ L+ YA+ G E F +++
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 271/532 (50%), Gaps = 21/532 (3%)
Query: 59 ATKNPNSR-----LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
A ++PNS + NG +AL Y M + D V + +C + +
Sbjct: 17 AIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQ 76
Query: 114 GLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH+++ +T + + LG A ++M+ + DL A F +M + L +WN LI GY+
Sbjct: 77 GQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ G AL +YQ M G+KPD TF L C V D+ +G+E+ + GY +
Sbjct: 137 RNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYAS 196
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D V NALI MY KCG L AR VFD + RD I+WN MISGY + G + L LF M
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMG 256
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR- 349
P+ +T +++A + D + GR +H V + G+ D+ + N L+ MY +
Sbjct: 257 PNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSL 316
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE +VF RM ++DV++W +I Y A++ ++ M+ E P+EIT+++VLSAC
Sbjct: 317 EEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSAC 376
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LG G +H L + +++ N+L++MY++C +D + VF I DK+++SW+
Sbjct: 377 AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWS 436
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I + S L F +++ L + VT+VS LSAC+ G L G +
Sbjct: 437 TLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSM--- 493
Query: 529 GVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
V G P+ ++D+ R GR++ A N + D AW LL+G
Sbjct: 494 -VGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 204/377 (54%), Gaps = 4/377 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M+ K G L A VF ++ +RD+ +WN +I GYAK G +AL L+QRM
Sbjct: 202 NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRM-GPNDP 260
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD-LVRAR 252
KP+V TF +L C + DL++G+ +H V GYE+D+ + N L+ MY KC L AR
Sbjct: 261 KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEAR 320
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ M RD I+WN +I Y + G+ L +F M+ V P+ +TLS+V+SA ++G
Sbjct: 321 QVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++ G+ VH + DV + N L+ MY G+ ++ VF+ + K +VSW+T+I+
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLI 431
Y +E + + EG D++T+ S LSAC+ G L G++ + GL
Sbjct: 441 AYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLA 500
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRK 490
++D+ S+ ++ A + H +P + ++WTS++ G +L+N + A K
Sbjct: 501 PDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADK 560
Query: 491 MMLNLKPNSVTLVSILS 507
+ + + V++LS
Sbjct: 561 LFELESEDEHSTVTLLS 577
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 144/274 (52%), Gaps = 8/274 (2%)
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + VF +E + VSWT +++ + + +A+ Y+ M EG PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQI 460
+ C+ +L G LH + + T L+ + II+ LI MY++C+ ++ A + F ++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN----LKPNSVTLVSILSACARIGALM 516
K +++W ++I G N AL ++ M+ +KP+++T S L AC +G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+EI A + G A D + NAL++MY +CG ++ A F+ RDV AWN +++GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 576 ERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
++G A E F++M D K N +GL C
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 271/503 (53%), Gaps = 6/503 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L ++++ C + G +H + K+ S + NA + M+ K G L A VF
Sbjct: 162 DGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF 221
Query: 154 GKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
M D RD+ SWN I G + G F EAL L++RM G + YT VL+ C +
Sbjct: 222 EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRM-QSDGFSMNSYTTVGVLQVCAELAQ 280
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L G+E+H +++ G E ++ NAL+ MY +CG + A VF + +D ISWN+M+S
Sbjct: 281 LNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSC 339
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y +N Y + + F M + +PD + S++SA +G GREVH Y +K D
Sbjct: 340 YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSD 399
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + N L+ MY+ + E +VF RM KD VSWTT+I+CY S +A+ ++ +
Sbjct: 400 LQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQK 459
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG D + + S+L AC+ L ++ L ++H A+R GL+ +I+ N +ID+Y +C +
Sbjct: 460 EGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCY 518
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
AL +F + K++++WTS++ N EA+ F KM+ ++P+SV LV IL A A
Sbjct: 519 ALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAG 578
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+ +L GKEIH +R +G + ++L+DMY CG M A F+ + +DV W +
Sbjct: 579 LSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAM 638
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+ G G A F++M+++
Sbjct: 639 INATGMHGHGKQAIYIFKRMLET 661
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 277/542 (51%), Gaps = 12/542 (2%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVD-EDALVNLVRLCEWKRGYDEG--LYLH 118
+ + L +LC +G L +AL+ L + D ++ L +R EG L+ H
Sbjct: 21 SAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAH 80
Query: 119 SVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
+V + + L L M+ K G L A +F M R +FSWN LIG +G
Sbjct: 81 AVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGA 140
Query: 178 DEALSLYQRMFW---VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EA+ +Y+ M V G PD T VL+ CG D + G EVH ++ G + V
Sbjct: 141 GEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLV 200
Query: 235 VNALITMYVKCGDLVRARLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
NAL+ MY KCG L A VF+ M RD SWN+ ISG +NG +++ L LF M+
Sbjct: 201 ANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDG 260
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ T V+ + GRE+H ++K G ++ CN L+ MY G +
Sbjct: 261 FSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSAL 319
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF + KD +SW +M+SCY + L +A++ + M G PD I S+LSA LG
Sbjct: 320 RVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLG 379
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G ++H A++ L S + IANTL+DMY KC ++ + VF ++ K+ +SWT+II
Sbjct: 380 RLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIA 439
Query: 474 GLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
++R EA+ FR +K + + + SIL AC+ + ++ K++H++A+R G+
Sbjct: 440 CYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-L 498
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D L N ++D+Y CG + A N F +++D+ W ++ +AE G A F KM+
Sbjct: 499 DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKML 558
Query: 592 DS 593
++
Sbjct: 559 NA 560
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 229/449 (51%), Gaps = 4/449 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL MQ ++ V ++++C + G LH+ + K
Sbjct: 234 NSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLK 293
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +++ NA L M+ + G + A VF ++ D+D SWN ++ Y + + EA+
Sbjct: 294 CGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDF 352
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G PD +L G + L G+EVH + ++ ++D+ + N L+ MY+
Sbjct: 353 FGEMVQ-NGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYI 411
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + + VFD M +D +SW +I+ Y ++ Y + + F ++ + D M + S
Sbjct: 412 KCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGS 471
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + L ++VH Y I+ G D + + N +I +Y G +F ++ KD
Sbjct: 472 ILEACSGLKSISLLKQVHSYAIRNGLLDLI-LKNRIIDIYGECGEVCYALNIFEMLDKKD 530
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+WT+M++C+ + L +AV + M G PD + + +L A A L +L G ++H
Sbjct: 531 IVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHG 590
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R + ++L+DMYS C ++ AL+VF + K+V+ WT++I ++ +
Sbjct: 591 FLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQ 650
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A+ F++M+ + P+ V+ +++L AC+
Sbjct: 651 AIYIFKRMLETGVSPDHVSFLALLYACSH 679
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
Query: 317 GREVHGYVIKMG-FSDDVS--VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H + + G DD + + L+ MY G + ++F M ++ V SW +I
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 374 YEGSVLPDKAVETYQMMEAE----GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
S +AV Y+ M A G+ PD T+ASVL AC G+ G ++H LA+++G
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFF 488
L ++AN L+ MY+KC +D AL VF + D ++V SW S I G N EAL F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R+M + NS T V +L CA + L G+E+HA L+ G F+ NALL MY RC
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN-IQCNALLVMYARC 312
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
G + A F ++D +WN +L+ Y + A A +FF +M+ + N
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 179/394 (45%), Gaps = 21/394 (5%)
Query: 55 TSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
T+ IA +SR +E A+ + Q+ I VD + +++ C +
Sbjct: 435 TTIIACYAQSSRYSE---------AIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLL 485
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+HS + L + L N + ++ + G++ +A +F + +D+ +W ++ +A+
Sbjct: 486 KQVHSYAIRN-GLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAEN 544
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G EA++L+ +M G++PD +L G+ L +GKE+H +IR + + V
Sbjct: 545 GLLHEAVALFGKML-NAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
V++L+ MY CG + A VFD +D + W AMI+ +G + + +F M E V
Sbjct: 604 VSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663
Query: 295 DPD---FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
PD F+ L S S+LV + K ++ K+ + C ++ + G EE
Sbjct: 664 SPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYAC--VVDLLGRSGQTEE 721
Query: 352 GEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSA 408
K M E K VV + +C + T +++E E P + + +++V +
Sbjct: 722 AYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAE 781
Query: 409 CACLGNL-DLGIKLHQLAMRTG-LISYIIIANTL 440
N+ ++ K+ + +R S+I I NT+
Sbjct: 782 MGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTV 815
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 286/545 (52%), Gaps = 13/545 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
LC G L++AL L++M V D L++ C R ++G +H+ + K+ +
Sbjct: 71 LCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 130
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
L N LSM+ K G L A VF + DR++ SW +I + EA Y+ M
Sbjct: 131 RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETM-K 189
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G KPD TF +L L+ G++VH+ + + G E + V +L+ MY KCGD+
Sbjct: 190 LAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDIS 249
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+A+++FD +P+++ ++W +I+GY + G+ L L M++ V P+ +T +S++
Sbjct: 250 KAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G++VH Y+I+ G+ ++ V N LI MY G +E K+F + +DVV+WT
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTA 369
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y D+A++ ++ M+ +G PD++T S L++C+ L G +HQ + G
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + + L+ MY+KC +D A VF+Q+ ++NV++WT++I G + R EAL +F
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFE 489
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVR 546
+M +KP+ VT S+LSAC +G + G++ H ++ + + + +D+ R
Sbjct: 490 QMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGR 548
Query: 547 CGRMKPAWNQFNSN--ERDVSAWNILLTGY-----AERGQGALAEEFFRKMIDSKGNWRK 599
G ++ A N + + S W LL+ ERG+ A AE + D G +
Sbjct: 549 AGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERA-AENVLKLDPDDDGAYVA 607
Query: 600 LMGLF 604
L ++
Sbjct: 608 LSNIY 612
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 159/361 (44%), Gaps = 70/361 (19%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G ++ AL+ L+ MQ+ + ++ ++++ C + G +H + ++ + +
Sbjct: 276 QGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWV 335
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M+ K G L A +FG + RD+ +W ++ GYA+ GF DEA+ L++RM G
Sbjct: 336 VNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM-QQQG 394
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD TF L +C L+ GK +H ++ GY DV + +AL++MY KCG + AR
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454
Query: 253 LV-------------------------------FDGMPKR----DRISWNAMIS-----G 272
LV F+ M K+ D++++ +++S G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 273 YFENGE------YMK-GLMLFIMMREVLVD---------------------PDFMTLSSV 304
E G Y+ G+ + VD P ++
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+SA + D + G V+K+ DD + L +Y + G E+ EKV ME +DV
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYV-ALSNIYAAAGRYEDAEKVRQVMEKRDV 633
Query: 365 V 365
V
Sbjct: 634 V 634
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 283/528 (53%), Gaps = 11/528 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +AL +M+ + +E AL +V C G G+ +H+V T + +
Sbjct: 81 NALPREALAAFRAMRARGVRCNEFAL-PIVLKCAPDAGL--GVQVHAVAVSTGLSGDIFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A VF + DR+ SWN ++ + K +A+ L+ M W
Sbjct: 138 ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVW-S 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P+ + F CV+ C G DL+ G++VH V+R GY+ DV NAL+ MY K GD+ A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS--ASE 309
LVF +PK D +SWNA ISG +G L L + M+ + P+ TLSS++ A
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G LGR++HG++IK D + L+ MY +G ++ KVF + KD++ W
Sbjct: 317 GAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNA 376
Query: 370 MIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS C G +++ + M EGS + T+A+VL + A L + ++H LA +
Sbjct: 377 LISGCSHGGC-HGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI 435
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G +S + N LID Y KC C+ A +VF + N+I++TS+I L + +A+ F
Sbjct: 436 GFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLF 495
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M+ L+P+ L S+L+ACA + A GK++HAH ++ D F NAL+ Y +C
Sbjct: 496 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKC 555
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
G ++ A F+ ++ V +W+ ++ G A+ G G A + FR+M+D +
Sbjct: 556 GSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDER 603
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 248/516 (48%), Gaps = 7/516 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ N A++ M + +E +V C R + G +H++V +
Sbjct: 171 NGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVR 230
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T V NA + M+ K GD+ A VFGK+ D+ SWN I G G AL L
Sbjct: 231 TGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALEL 290
Query: 184 YQRMFWVGGVKPDVYTFPCVLR--TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+M G+ P+V+T +L+ G G+++H +I+ ++D + AL+ M
Sbjct: 291 LLQM-KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDM 349
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G L AR VF+ +P++D + WNA+ISG G + + L LF MR+ D + TL
Sbjct: 350 YAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTL 409
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++V+ ++ + +VH K+GF D V N LI Y KVF S
Sbjct: 410 AAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSS 469
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+++++T+MI+ + A++ + M +G PD ++S+L+ACA L + G ++
Sbjct: 470 DNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 529
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ ++ + N L+ Y+KC I+ A F +PDK V+SW+++I GL +
Sbjct: 530 HAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHG 589
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNA 539
AL FR+M+ + PN +TL S+L AC G + K + + G+ +
Sbjct: 590 KRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSC 649
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
++D+ R G++ A NS E + + W LL
Sbjct: 650 MIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 234/486 (48%), Gaps = 17/486 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G ++H+ + K S L N LS + K G A VF + D SW+ L+ Y+
Sbjct: 23 GAHIHAHLLK--SGLLHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSN 80
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
EAL+ ++ M GV+ + + P VL+ PD G +VH + G D+
Sbjct: 81 NALPREALAAFRAM-RARGVRCNEFALPIVLKC---APDAGLGVQVHAVAVSTGLSGDIF 136
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+ MY G + AR VFD + R+ +SWN M+S + +N + LF M
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V P+ S V++A D + GR+VH V++ G+ DV N L+ MY G+
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVL---PDKAVETYQMMEAEGSMPDEITIASVLSAC 409
VF ++ DVVSW IS G VL A+E M++ G +P+ T++S+L AC
Sbjct: 257 ALVFGKVPKTDVVSWNAFIS---GCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 410 ACLGNLDLGI--KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A G + ++H ++ S I L+DMY+K +D A +VF IP K+++
Sbjct: 314 AGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLL 373
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I G E+L F +M N TL ++L + A + A+ ++HA A
Sbjct: 374 WNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAE 433
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEE 585
+IG D + N L+D Y +C ++ A F + D + A+ ++T ++ G A +
Sbjct: 434 KIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIK 493
Query: 586 FFRKMI 591
F +M+
Sbjct: 494 LFMEML 499
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+I+ +L+ A +L LG +H +++GL+ N L+ YSKC+ A VF +
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
PD +SW+S++ N EAL FR M ++ N L +L CA L G
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GV 120
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAER 577
++HA A+ G++ D F+ NAL+ MY G + A F+ RD +A WN +++ + +
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 578 GQGALAEEFFRKMI 591
+ + A E F +M+
Sbjct: 181 DRCSDAVELFGEMV 194
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 261/482 (54%), Gaps = 13/482 (2%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ VVSK + ++ + ++++ G++ A + F + +RD+++WN++I GY +A
Sbjct: 73 LHARLVVSKQIQNVCI--SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G E + + G+ PD TFP VL+ C V D G ++H ++FG+ DV V
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+LI +Y + + AR++FD MP RD SWNAMISGY ++G + L L +R +
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D +T+ S++SA GD G +H Y IK G ++ V N LI +Y FG + +K
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF RM +D++SW ++I YE + P +A+ +Q M PD +T+ S+ S + LG+
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 415 LDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ + +R G + I I N ++ MY+K +D A VF+ +P+ +VISW +II
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 474 GLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G N + EA+ + M + N T VS+L AC++ GAL G ++H L+ G+
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKM 590
D F+ +L DMY +CGR++ A + F R S WN L+ + G G A F++M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 591 ID 592
+D
Sbjct: 544 LD 545
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 254/484 (52%), Gaps = 18/484 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H + K V + + + ++ ++ +G+A +F +M RD+ SWN +I GY
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G EAL+L G D T +L C D RG +H + I+ G E+++
Sbjct: 228 QSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V N LI +Y + G L + VFD M RD ISWN++I Y N + ++ + LF MR
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREE 351
+ PD +TL S+ S +GD + R V G+ ++ G F +D+++ N ++ MY G +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACA 410
VF+ + + DV+SW T+IS Y + +A+E Y +ME EG + ++ T SVL AC+
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L G+KLH ++ GL + + +L DMY KC ++ AL +F+QIP N + W +
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHAL 526
+I + +A++ F++M+ +KP+ +T V++LSAC+ G + G+ E+
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ---GA 581
I + + ++DMY R G+++ A S + D S W LL+ G G
Sbjct: 583 GITPSLKHY--GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
Query: 582 LAEE 585
+A E
Sbjct: 641 IASE 644
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 211/416 (50%), Gaps = 23/416 (5%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV+T + R C +L+ K +H ++ +V + L+ +Y G++ AR F
Sbjct: 56 DVHT---LFRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDE 314
D + RD +WN MISGY G + + F + M + PD+ T SV+ A V D
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID- 168
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++H +K GF DV V LI +Y + +F M +D+ SW MIS Y
Sbjct: 169 --GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S +A+ + A D +T+ S+LSAC G+ + G+ +H +++ GL S +
Sbjct: 227 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++N LID+Y++ + +VF ++ +++ISW SII LN + A+ F++M L+
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKP 552
++P+ +TL+S+ S +++G + + + LR G + + NA++ MY + G +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 553 AWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID------SKGNWRKLM 601
A FN DV +WN +++GYA+ G + A E + M + ++G W ++
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 212/422 (50%), Gaps = 15/422 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +G+ ++AL + ++ + D +V+L+ C ++ G+ +HS K
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N + ++ +FG L VF +M RDL SWN +I Y A+SL
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M + ++PD T + + D++ + V +R G + D+ + NA++ MY
Sbjct: 336 FQEMR-LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K G + AR VF+ +P D ISWN +ISGY +NG + + ++ IM E + + T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV+ A G + G ++HG ++K G DV V L MY G E+ +F ++
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V W T+I+C+ +KAV ++ M EG PD IT ++LSAC+ G +D G
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 422 HQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLR 476
++ M+T G+ + ++DMY + ++ AL+ + PD ++ W +++ R
Sbjct: 575 FEM-MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSACR 631
Query: 477 LN 478
++
Sbjct: 632 VH 633
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 257/483 (53%), Gaps = 6/483 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S + ++++V FG L HA+ F + + + +WN ++ G G F +A+ Y M
Sbjct: 66 SSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV PD YT+P VL+ C + L+ G+ VH + +A+V V A+I M+ KCG +
Sbjct: 126 Q-HGVTPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSV 183
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR +F+ MP RD SW A+I G NGE ++ L+LF MR + PD + ++S++ A
Sbjct: 184 EDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPAC 243
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ KLG + ++ GF D+ V N +I MY G+ E +VFS M DVVSW+
Sbjct: 244 GRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWS 303
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T+I+ Y + L ++ + Y M G + I SVL A L L G ++H ++
Sbjct: 304 TLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKE 363
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL+S +++ + LI MY+ C I +A +F DK+++ W S+I+G L A F
Sbjct: 364 GLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTF 423
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R++ +PN +T+VSIL C ++GAL GKEIH + + G+ + + N+L+DMY +C
Sbjct: 424 RRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKC 483
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLF 604
G ++ F R+V+ +N +++ GQG F+ +M + ++ N + L
Sbjct: 484 GFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLL 543
Query: 605 RKC 607
C
Sbjct: 544 SAC 546
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/498 (31%), Positives = 254/498 (51%), Gaps = 16/498 (3%)
Query: 31 YFKPKTRHFSSKNAQSVQVL----NTQN---TSSIATKNP----NSRLNELCLNGSLEQA 79
+F+P H SS +Q V V + Q+ T P N+ L L G +A
Sbjct: 58 FFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKA 117
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV-SKTMSHLSVRLGNAFLS 138
+ + SM + + D +++ C G ++H + KT +++ V+ A +
Sbjct: 118 IHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQC--AVID 175
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
MF K G + A +F +M DRDL SW LI G G EAL L+++M G+ PD
Sbjct: 176 MFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKM-RSEGLMPDSV 234
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L CG + +K G + V +R G+E+D+ V NA+I MY KCGD + A VF M
Sbjct: 235 IVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHM 294
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D +SW+ +I+GY +N Y + L+I M V + + + +SV+ A + K G+
Sbjct: 295 VYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGK 354
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
E+H +V+K G DV V + LI MY + G+ +E E +F KD++ W +MI Y
Sbjct: 355 EMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVG 414
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ A T++ + P+ IT+ S+L C +G L G ++H ++GL + + N
Sbjct: 415 DFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN 474
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
+LIDMYSKC ++ +VF Q+ +NV ++ ++I + + + L F+ +M +P
Sbjct: 475 SLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRP 534
Query: 498 NSVTLVSILSACARIGAL 515
N VT +S+LSAC+ G L
Sbjct: 535 NKVTFISLLSACSHAGLL 552
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 7/412 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL M+ + D + +++ C G+ L ++ + +
Sbjct: 211 NGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYV 270
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K GD A VF M D+ SW+ LI GY++ + E+ LY M VG
Sbjct: 271 SNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVG- 329
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ + VL G + LK+GKE+H V++ G +DV V +ALI MY CG + A
Sbjct: 330 LATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAE 389
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +D + WN+MI GY G++ F + P+F+T+ S++ +G
Sbjct: 390 SIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMG 449
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+E+HGYV K G +VSV N LI MY G E GEKVF +M ++V ++ TMIS
Sbjct: 450 ALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMIS 509
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLI 431
+K + Y+ M+ EG+ P+++T S+LSAC+ G LD G L+ + G+
Sbjct: 510 ACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIE 569
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLRLNNR 480
+ + ++D+ + +D A + ++ PD NV + S++ RL+N+
Sbjct: 570 PNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANV--FGSLLGACRLHNK 619
>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 836
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 239/429 (55%), Gaps = 4/429 (0%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I GY +AG EAL ++ M G+ PD YTF L+ C G D + G +H +
Sbjct: 67 WNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLI 126
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
G+E+DV + AL+ MY K GDLV AR VFD MP +D ++WN M+SG +NG + L
Sbjct: 127 AEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEAL 186
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF M VD D ++L ++I A + + R +HG VIK GF+ S + LI MY
Sbjct: 187 RLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAFS--SGLIDMY 244
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
+ E VF + SKD SW TM++ Y + ++ +E + +M +++ A
Sbjct: 245 CKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAA 304
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S L A A +GNL+ GI +H+ ++ G++S I +A +LI+MYSKC ++ A ++F +I D+
Sbjct: 305 SALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDR 364
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW+++I + EAL FR MM + KPN+VTL S+L CA + A GK IH
Sbjct: 365 DVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGA 581
+A++ V + A++ MY +CG P F +D A+N L GY + G +
Sbjct: 425 CYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDAS 484
Query: 582 LAEEFFRKM 590
A + ++ M
Sbjct: 485 KAFDVYKNM 493
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 267/531 (50%), Gaps = 7/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS + G ++AL+ M E I D+ ++ C ++EGL +H +++
Sbjct: 68 NSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIA 127
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ V +G A + M+ K GDL A VF KM +D+ +WN ++ G A+ G EAL
Sbjct: 128 EMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALR 187
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L++ M V D + ++ + + +H VI+ G+ + + LI MY
Sbjct: 188 LFRDMH-SSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAFS--SGLIDMY 244
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC DL A VF+ + +D SW M++ Y NG + + L LF +MR V + + +
Sbjct: 245 CKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAA 304
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S + A+ VG+ + G +H Y ++ G D+SV LI MY G E E++F +++ +
Sbjct: 305 SALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDR 364
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DVVSW+ MI+ +E + D+A+ ++ M P+ +T+ SVL CA + LG +H
Sbjct: 365 DVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A++ + S + A +I MY+KC L+ F ++P K+ I++ ++ G +
Sbjct: 425 CYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDAS 484
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+A ++ M L+ + P+S T+V +L CA G ++ ++ G + + +AL+
Sbjct: 485 KAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALI 544
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
DM+ +C + A + F+ E+ +WNI++ GY GQ A FR+M
Sbjct: 545 DMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQM 595
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 263/534 (49%), Gaps = 6/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L NG +AL+ M + +D +L NL+ D LH +V K
Sbjct: 170 NTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIK 229
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M+ K DL A VF ++ +D SW ++ YA G F+E L L
Sbjct: 230 --KGFTSAFSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLEL 287
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V+ + L+ V +L++G +H + ++ G +D+ V +LI MY
Sbjct: 288 FDVMRNYD-VRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYS 346
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L A +F + RD +SW+AMI+ + + G++ + L LF M P+ +TL+S
Sbjct: 347 KCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTS 406
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ V +LG+ +H Y IK ++ +I MY G K F R+ KD
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKD 466
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+++ + Y KA + Y+ M+ G PD T+ +L CA + G ++
Sbjct: 467 AIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYG 526
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSF 482
++ G S +A+ LIDM++KC + A +F + +K+ +SW ++ G L+ ++
Sbjct: 527 QIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA+ FR+M + +PN+VT V+I+ A A + AL G +H+ ++ G + N+L+
Sbjct: 587 EAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLV 646
Query: 542 DMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
DMY +CG ++ + F +++ +WN +L+ YA G A F M +++
Sbjct: 647 DMYAKCGMIESSKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENE 700
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 244/453 (53%), Gaps = 7/453 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH--SVVSKTMSHLSV 130
NGS E+ L+ D M+ ++ +++ A + ++ + ++G+ +H +V MS +SV
Sbjct: 278 NGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISV 337
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ ++M+ K G+L A +F K+ DRD+ SW+ +I + +AG DEALSL++ M
Sbjct: 338 --ATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRT 395
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
KP+ T VL+ C GV + GK +H + I+ E++++ A+I+MY KCG
Sbjct: 396 H-FKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSP 454
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
F+ +P +D I++NA+ GY + G+ K ++ M+ V PD T+ ++ L
Sbjct: 455 TLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCAL 514
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTT 369
D G V+G +IK GF + V + LI M+ + +F + K VSW
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNI 574
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y ++A+ T++ M+ E P+ +T +++ A A L L LG+ +H ++ G
Sbjct: 575 MMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFG 634
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S+ + N+L+DMY+KC I+ + + F +I +KN++SW +++ + + A+ F
Sbjct: 635 FCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFL 694
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
M N LKP+SV+ +S+LSAC G GK I
Sbjct: 695 SMQENELKPDSVSFLSVLSACRHAGLAEEGKRI 727
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 4/408 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++AL M + + L ++++ C G +H K +
Sbjct: 380 GQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETA 439
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +SM+ K G F ++ +D ++N L GY + G +A +Y+ M + GV
Sbjct: 440 TAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNM-KLHGV 498
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T +L+TC D RG V+ +I+ G++++ V +ALI M+ KC L A+
Sbjct: 499 CPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKS 558
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD ++ +SWN M++GY +G+ + + F M+ P+ +T +++ A+ +
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELA 618
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG VH +I+ GF V N L+ MY G E +K F + +K++VSW TM+S
Sbjct: 619 ALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLS 678
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLI 431
Y L + AV + M+ PD ++ SVLSAC G + G ++ ++ R +
Sbjct: 679 AYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEMEERHKIE 738
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLN 478
+ + ++D+ K D+A+E+ ++ K + W +++ R++
Sbjct: 739 AKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLNSSRMH 786
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 200/396 (50%), Gaps = 13/396 (3%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H +I G + ++NA +++ + DL +R + D +P + WN+MI GY G
Sbjct: 23 QIHGSLIVAGLKPHNQLINAY-SLFQR-PDL--SRKIVDSVPYPGVVLWNSMIRGYTRAG 78
Query: 278 EYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L +F M E +DPD T + + A D + G +H + +MGF DV +
Sbjct: 79 LHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIG 138
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L++MY G+ +VF +M KD+V+W TM+S + +A+ ++ M +
Sbjct: 139 TALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVD 198
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D +++ +++ A + L D+ LH L ++ G S ++ LIDMY KC + A V
Sbjct: 199 IDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTS--AFSSGLIDMYCKCADLYAAECV 256
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGA 514
F ++ K+ SW + ++ +N SFE ++ +M N ++ N V S L A A +G
Sbjct: 257 FEEVFSKDESSWGT-MMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGN 315
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTG 573
L G IH + ++ G+ D + +L++MY +CG ++ A F +RDV +W+ ++
Sbjct: 316 LEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIAS 375
Query: 574 YAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ + GQ A FR M+ + K N L + + C
Sbjct: 376 FEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGC 411
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 396 MPDE-ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
MP+ T+ +L C N L +++H + GL + N LI+ YS + D +
Sbjct: 1 MPNTCTTLLRMLRECK---NFRLLLQIHGSLIVAGLKPH----NQLINAYSLFQRPDLSR 53
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARI 512
++ +P V+ W S+I G EAL F M + P+ T L ACA
Sbjct: 54 KIVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGS 113
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
G IH +G D ++ AL++MY + G + A F+ +D+ WN ++
Sbjct: 114 MDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMV 173
Query: 572 TGYAERGQGALAEEFFRKMIDS 593
+G A+ G + A FR M S
Sbjct: 174 SGLAQNGCSSEALRLFRDMHSS 195
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 10/225 (4%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+T + N +N L+G E+A+ M+ + VN+VR G+ +H
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSLGMSVH 627
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
S + + +GN+ + M+ K G + + F ++ ++++ SWN ++ YA G +
Sbjct: 628 SSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLSAYAAHGLAN 687
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A+SL+ M +KPD +F VL C + GK + F + + A
Sbjct: 688 CAVSLFLSM-QENELKPDSVSFLSVLSACRHAGLAEEGKRI------FKEMEERHKIEAK 740
Query: 239 ITMYVKCGDLVRARLVFD---GMPKRDRISWNAMISGYFENGEYM 280
+ Y DL+ +FD M +R R+ + + G N M
Sbjct: 741 VEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLNSSRM 785
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 256/486 (52%), Gaps = 4/486 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYA 172
G +H++ T V + NA ++M+ FG + A VF + +R+ SWN L+ Y
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K +A+ ++ M W G++P + F CV+ C G ++ G++VH V+R GYE DV
Sbjct: 86 KNDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 144
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
NAL+ MYVK G + A ++F+ MP D +SWNA+ISG NG + + L + M+
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS 204
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P+ LSS++ A G LGR++HG++IK D + L+ MY ++
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
KVF M +D++ W +IS D+A + + EG + T+A+VL + A L
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++H LA + G I + N LID Y KC C+ A+ VF + ++I+ TS+I
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
L + A+ F +M+ L+P+ L S+L+ACA + A GK++HAH ++
Sbjct: 385 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 444
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D F NAL+ Y +CG ++ A F+S ER V +W+ ++ G A+ G G A E F +M
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 504
Query: 591 IDSKGN 596
+D N
Sbjct: 505 VDEGIN 510
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 230/475 (48%), Gaps = 5/475 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R D G +H++V + V NA + M+VK G + A +F KM D D
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G G A+ L +M G+ P+V+ +L+ C G G+++H
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQM-KSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 233
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ ++D + L+ MY K L A VFD M RD I WNA+ISG G +
Sbjct: 234 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 293
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ +F +R+ + + TL++V+ ++ + R+VH K+GF D V N LI
Sbjct: 294 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 353
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y + +VF S D+++ T+MI+ + A++ + M +G PD
Sbjct: 354 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 413
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++S+L+ACA L + G ++H ++ +S N L+ Y+KC I+ A F +
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P++ V+SW+++I GL + AL F +M+ + PN +T+ S+L AC G + K
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533
Query: 520 E-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++ G+ + ++D+ R G++ A NS + + S W LL
Sbjct: 534 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 207/406 (50%), Gaps = 12/406 (2%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV + + P VL+ VPD + G +VH + G+ +DV V NAL+ MY G + A
Sbjct: 5 GVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 61
Query: 252 RLVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
R VFD +R+ +SWN ++S Y +N + + +F M + P S V++A
Sbjct: 62 RRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 121
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ GR+VH V++MG+ DV N L+ MY+ G + +F +M DVVSW +
Sbjct: 122 SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNAL 181
Query: 371 ISCYEGSVL---PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
IS G VL +A+E M++ G +P+ ++S+L ACA G DLG ++H ++
Sbjct: 182 IS---GCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK 238
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-I 486
S I L+DMY+K +D A++VF + +++I W ++I G R EA I
Sbjct: 239 ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSI 298
Query: 487 FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+ L N TL ++L + A + A +++HA A +IG FD + N L+D Y +
Sbjct: 299 FYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWK 358
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
C + A F + D+ A ++T ++ G A + F +M+
Sbjct: 359 CSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 194/417 (46%), Gaps = 3/417 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG +A++ L M+ + + L ++++ C +D G +H + K
Sbjct: 179 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK 238
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G + M+ K L A VF M RDL WN LI G + G DEA S+
Sbjct: 239 ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSI 298
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + G+ + T VL++ + ++VH + G+ D VVN LI Y
Sbjct: 299 FYGL-RKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYW 357
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC L A VF+ D I+ +MI+ + + LF+ M ++PD LSS
Sbjct: 358 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 417
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + + G++VH ++IK F D N L+ Y G+ E+ E FS + +
Sbjct: 418 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG 477
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VVSW+ MI +A+E + M EG P+ IT+ SVL AC G +D + +
Sbjct: 478 VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFN 537
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ G+ + +ID+ + +D A+E+ + +P N W +++ R++
Sbjct: 538 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 35/206 (16%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M AEG +E + VL C+ + LG ++H +AM TG S + +AN L+ MY
Sbjct: 1 MRAEGVCCNEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 450 IDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+D A VF + ++N +SW ++ N++ +A+ F +M+ + ++P +++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAW 567
AC + G+++HA +R+G D F NAL+DM
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM------------------------ 153
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
Y + G+ +A F KM DS
Sbjct: 154 ------YVKMGRVDIASVIFEKMPDS 173
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 276/532 (51%), Gaps = 18/532 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N EL L + Q K +S+Q +L++ C ++ G +H +
Sbjct: 2 NPAATELSLQTHINQLKKSSESLQPAR-------YASLLQKCTEQKSAAAGKLVHQHILS 54
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ + N + M+ K G L A VF + + ++FSW LI YAK G E L L
Sbjct: 55 SGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGL 114
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G KPD + F VL C L GK +H + G E V V NA++ +Y
Sbjct: 115 FRKM-QLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYG 172
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLS 302
KCG + A+ VF+ +P+R+ +SWNA+I+ +NG + +F +M + V P+ T
Sbjct: 173 KCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFV 232
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV+ A + D G+ H +I+ GF + V N L+ MY G+ + VF +M S+
Sbjct: 233 SVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSR 292
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+VVSWT MI Y A + Y+ M+ E P+ +T +V+ +C +L ++H
Sbjct: 293 NVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIH 349
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK--NVISWTSIILGLRLNNR 480
+ +G S ++ L+ MY KC +D A +F + ++ N ++W ++I GL +
Sbjct: 350 AHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGE 409
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S +AL F KM L ++PNSVT ++ L AC+ + L G+++HA L + + L NA
Sbjct: 410 SKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNA 468
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+++MY +CG + A ++F ERDV +WN ++ YA+ G G A EFF++M
Sbjct: 469 VINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQM 520
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 264/523 (50%), Gaps = 11/523 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L + L MQ D ++ C +EG +H V +G
Sbjct: 106 GHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VG 164
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++++ K G + A VF ++ +R+L SWN LI A+ G +A+ ++ M G V
Sbjct: 165 NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSV 224
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ TF V+ C + DL RGK H +IR G+++ + V N+L+ MY KCG + RARL
Sbjct: 225 RPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARL 284
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M R+ +SW MI Y + G +++ F + + + +P+ +T +V+ + D
Sbjct: 285 VFEKMSSRNVVSWTVMIWAYAQQG-FIRA--AFDLYKRMDCEPNAVTFMAVMDSCLRPED 341
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVSWTTMI 371
++H +++ GF D + L+ MY G+ + +F ++ S + V+W MI
Sbjct: 342 LPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMI 401
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S +A+E + ME EG P+ +T + L AC+ L +L G +LH + I
Sbjct: 402 SGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLEN-I 460
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++N +I+MY KC +D+A++ F ++P+++V+SW ++I + +AL FF++M
Sbjct: 461 HEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQM 520
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFLPNALLDMYVRCG 548
L + T + + AC + +L GK IH+ D + AL+ MY RCG
Sbjct: 521 DLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCG 580
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + F S+ R++ W+ L+ A+ G+ A + FR+M
Sbjct: 581 SLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREM 623
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 236/452 (52%), Gaps = 11/452 (2%)
Query: 73 NGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG + A++ M + ++ ++ V++V C G H + +T +
Sbjct: 205 NGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN+ ++M+ K G + A VF KM R++ SW V+I YA+ GF A LY+RM
Sbjct: 265 VGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---- 320
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+P+ TF V+ +C DL R +++H H++ G+++D + L+TMY KCG + A
Sbjct: 321 DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSA 380
Query: 252 RLVFDGMPKR--DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+F+ + +R + ++WNAMISG ++GE + L F M V P+ +T + + A
Sbjct: 381 WSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACS 440
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ D GR++H ++ + ++ N +I MY G+ +E F++M +DVVSW T
Sbjct: 441 SLNDLTRGRQLHARILLENIHE-ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNT 499
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y +A+E ++ M+ EG D T + AC + +L LG +H +
Sbjct: 500 MIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAA 559
Query: 430 --LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L +A L+ MY++C + A VF + +N+++W+++I + R EAL
Sbjct: 560 PCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDL 619
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
FR+M L KP+++T ++++AC+R G + G
Sbjct: 620 FREMQLQGTKPDALTFSTLVAACSRRGVVKDG 651
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 159/311 (51%), Gaps = 8/311 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR--DLFSWNVLIGG 170
E ++ H V S S +++ ++M+ K G + AW +F + +R + +WN +I G
Sbjct: 346 EQIHAHMVASGFDSDAVLQV--CLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISG 403
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
A+ G +AL + +M + GV+P+ T+ L C + DL RG+++H ++
Sbjct: 404 LAQHGESKQALECFWKME-LEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIH- 461
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ ++ NA+I MY KCG L A F MP+RD +SWN MI+ Y ++G + L F M
Sbjct: 462 EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMD 521
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYLSFGN 348
D T I A V LG+ +H V D V L+ MY G+
Sbjct: 522 LEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGS 581
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ + VF R S+++V+W+ +I+ ++A++ ++ M+ +G+ PD +T +++++A
Sbjct: 582 LHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAA 641
Query: 409 CACLGNLDLGI 419
C+ G + G+
Sbjct: 642 CSRRGVVKDGV 652
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 26/125 (20%)
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+K +L+P S+L C + GK +H H L G + ++ N L+ MY +C
Sbjct: 17 LKKSSESLQP--ARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKC 74
Query: 548 GRMKPAWNQF----NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
G ++ A F N N V +W L+T YA+ +G+ R+++GL
Sbjct: 75 GCLEDALEVFELLPNPN---VFSWTALITAYAK-----------------EGHLREVLGL 114
Query: 604 FRKCQ 608
FRK Q
Sbjct: 115 FRKMQ 119
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/516 (30%), Positives = 277/516 (53%), Gaps = 3/516 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A+ M+ + +E ++ C + G +H+ K + +G+A +
Sbjct: 213 AVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVD 272
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
++ K G++ A VF M ++ SWN L+ G+A+ G ++ L+L+ RM + +
Sbjct: 273 LYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTG-SEINFSKF 331
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T VL+ C +L+ G+ VH IR G E D + L+ MY KCG A VF +
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D +SW+A+I+ + G+ + +F MR V P+ TL+S++SA+ +GD G
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H V K GF D +VCN L+ MY+ G+ ++G +VF ++D++SW ++S + +
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
D + + M AEG P+ T S+L +C+ L ++DLG ++H ++ L +
Sbjct: 512 TCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 571
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L+DMY+K + ++ A +F+++ +++ +WT I+ G + + +A+ F +M +KP
Sbjct: 572 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKP 631
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N TL S LS C+RI L G+++H+ A++ G + D F+ +AL+DMY +CG ++ A F
Sbjct: 632 NEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ RD +WN ++ GY++ GQG A + F M+D
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 727
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 267/492 (54%), Gaps = 3/492 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C K +EG +H V K+ + L N+ ++++ K G +A VFG++ +RD
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW LI G+ G+ A++L+ M GV+ + +T+ L+ C DL+ GK+VH
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEM-RREGVEANEFTYATALKACSMCLDLEFGKQVH 252
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
I+ G +D+ V +AL+ +Y KCG++V A VF MPK++ +SWNA+++G+ + G+
Sbjct: 253 AEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAE 312
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K L LF M ++ TLS+V+ G+ + G+ VH I++G D + L+
Sbjct: 313 KVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLV 372
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G + KVF R+E DVVSW+ +I+C + +A E ++ M G +P++
Sbjct: 373 DMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQF 432
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+AS++SA LG+L G +H + G + N L+ MY K + VF
Sbjct: 433 TLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT 492
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
++++ISW +++ G N L F +M+ PN T +SIL +C+ + + GK
Sbjct: 493 TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 552
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++HA ++ + + F+ AL+DMY + ++ A FN +RD+ AW +++ GYA+ G
Sbjct: 553 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 612
Query: 579 QGALAEEFFRKM 590
QG A + F +M
Sbjct: 613 QGEKAVKCFIQM 624
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 237/458 (51%), Gaps = 2/458 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ LN G E+ L M I + L +++ C G +HS+ +
Sbjct: 299 NALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIR 358
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + M+ K G G A VF ++ D D+ SW+ +I + G EA +
Sbjct: 359 IGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEV 418
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM GV P+ +T ++ + DL G+ +H V ++G+E D V NAL+TMY+
Sbjct: 419 FKRMRH-SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYM 477
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + VF+ RD ISWNA++SG+ +N GL +F M +P+ T S
Sbjct: 478 KIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFIS 537
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + D LG++VH ++K + V L+ MY E+ E +F+R+ +D
Sbjct: 538 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRD 597
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ +WT +++ Y +KAV+ + M+ EG P+E T+AS LS C+ + LD G +LH
Sbjct: 598 LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS 657
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+A++ G + +A+ L+DMY+KC C++ A VF + ++ +SW +II G + + +
Sbjct: 658 MAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGK 717
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
AL F M+ P+ VT + +LSAC+ +G + GK+
Sbjct: 718 ALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 755
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 34/325 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ N + + L+ + M + ++++R C D G +H+ + K
Sbjct: 501 NALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 560
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G A + M+ K L A +F ++ RDLF+W V++ GYA+ G ++A+
Sbjct: 561 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKC 620
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M GVKP+ +T L C + L G+++H I+ G D+ V +AL+ MY
Sbjct: 621 FIQM-QREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYA 679
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A +VFDG+ RD +SWN +I GY ++G+ K L F M + PD +T
Sbjct: 680 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 739
Query: 304 VISASELVG----------------------------DEKLGR-----EVHGYVIKMGFS 330
V+SA +G + LGR EV ++ +M +
Sbjct: 740 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKV 355
+V + ++ GN E GE+
Sbjct: 800 SNVLIWETVLGACKMHGNIEFGERA 824
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+ +L CA G+L+ G +H +++G+ + N+L+++Y+KC + A +VF +IP+
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
++V+SWT++I G A+ F +M ++ N T + L AC+ L GK++
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
HA A+++G D F+ +AL+D+Y +CG M A F +++ +WN LL G+A+ G
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311
Query: 581 ALAEEFFRKMIDSKGNWRKL 600
F +M S+ N+ K
Sbjct: 312 EKVLNLFCRMTGSEINFSKF 331
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 257/473 (54%), Gaps = 42/473 (8%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M ++++SW+++IG YA+ G +EA L++RM G++P+ T VL C +L
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERME-SEGIRPNAVTCLHVLGACSCQNELPF 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK+VH ++ ++ D+ + +L+ MY KCG+L AR VF+ + ++D ISW+ MIS Y +
Sbjct: 60 GKKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQ 119
Query: 276 NGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+G + + + ++ +M E V+P+ +T VI A GD GR+VHG ++ +G DV+
Sbjct: 120 SGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVA 179
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V + L+++Y+ GN E+ +K F R+E +DV+ W M+S Y P + +E Y M+ E
Sbjct: 180 VGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAMDVE- 238
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P+ +T +VL AC+ + +L G K+H + +GL + + + +L+ +Y KC+ + A
Sbjct: 239 --PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCRSLKSAC 296
Query: 455 EVFHQIPDKN-----------------------------------VISWTSIILGLRLNN 479
+VF + K+ V+ WT++I
Sbjct: 297 QVFEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAG 356
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
R EAL ++ M+ +KPNSVT S+LSAC+ +G ++ G++IH+ D + N
Sbjct: 357 RGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEELDVAVQN 416
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+LL +Y RCG ++ AW+ F + RDV +W ++ +A G A A E R+M
Sbjct: 417 SLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREM 469
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 268/540 (49%), Gaps = 46/540 (8%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A + M+ I + ++++ C + G +H+ +S + + L
Sbjct: 19 NGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFGKKVHAYISASEFKWDISL 78
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ ++M+ K G+L A VF ++ +D+ SW+ +I Y ++G EA+ +Y+ M
Sbjct: 79 QTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETS 138
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ TF V+ C G D+ RG++VH ++ G E DV V +AL+ +YVKCG+L A+
Sbjct: 139 VEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAVGSALVQLYVKCGNLEDAK 198
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
FD + KRD + WN M+S Y E G + + + M V+P+ +T ++V+ A +
Sbjct: 199 KAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAMD---VEPNAVTYTNVLIACSAME 255
Query: 313 DEKLGREVHGYVIKMGFSDDV-----------------SVCN----------------PL 339
D G++VH ++ G D+ S C L
Sbjct: 256 DLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCRSLKSACQVFEAMGKKDTDVVTDTAL 315
Query: 340 IKMYLSFGNREEGEKVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
+ MY + GN E ++VF R E +DVV WT MI+ Y + ++A+ Y+ M +E P
Sbjct: 316 LNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKP 375
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +T SVLSAC+ LGN+ G K+H + + N+L+ +Y++C + A F
Sbjct: 376 NSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEELDVAVQNSLLSLYARCGSLRDAWSCF 435
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALM 516
+I +++V SWT ++ + S AL R+M L + P++VT S+L AC+ G+L
Sbjct: 436 AKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLE 495
Query: 517 CG-KEIHAHALRIGV--AFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILL 571
G + A+ V + D +L ++D+ R GR+ A QF ER+ W +LL
Sbjct: 496 RGWASFVSMAVDYAVEPSKDHYL--CMVDLLARAGRLAEAREVIQFVGLERESMGWMMLL 553
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 178/341 (52%), Gaps = 6/341 (1%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +++ SW+ MI Y +NG + +LF M + P+ +T V+ A + G
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++VH Y+ F D+S+ L+ MY GN E KVF+R+E KDV+SW+TMIS Y S
Sbjct: 61 KKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQS 120
Query: 378 VLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+E Y++ME+E S+ P+ +T V+ AC G++ G ++H + GL + + +
Sbjct: 121 GRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAV 180
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
+ L+ +Y KC ++ A + F ++ ++V+ W ++ + + + M +++
Sbjct: 181 GSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAM--DVE 238
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN+VT ++L AC+ + L G+++H+ + G+ D + +LL +Y++C +K A
Sbjct: 239 PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCRSLKSACQV 298
Query: 557 FNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F + + DV LL YA G A+ F D +
Sbjct: 299 FEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDER 339
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 255/446 (57%), Gaps = 6/446 (1%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF +M DR F+WN +IG Y G AL+LY M V GV + +FP +L+ C +
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR-VEGVPLGLSSFPALLKACAKLR 159
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-DRISWNAMI 270
D++ G E+H +++ GY + +VNAL++MY K DL AR +FDG ++ D + WN+++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-F 329
S Y +G+ ++ L LF M P+ T+ S ++A + KLG+E+H V+K
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
S ++ VCN LI MY G + E++ +M + DVV+W ++I Y +++ +A+E +
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M A G DE+++ S+++A L NL G++LH ++ G S + + NTLIDMYSKC
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 399
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
F ++ DK++ISWT++I G N+ EAL FR + ++ + + L SIL A
Sbjct: 400 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 459
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
+ + +++ KEIH H LR G+ D + N L+D+Y +C M A F S +DV +W
Sbjct: 460 SSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 518
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
+++ A G + A E FR+M+++
Sbjct: 519 TSMISSSALNGNESEAVELFRRMVET 544
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 6/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG AL +M+ + + + L++ C R G LHS++ K
Sbjct: 114 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 173
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
H + + NA +SM+ K DL A +F ++ D WN ++ Y+ +G E L
Sbjct: 174 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 233
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITM 241
L++ M G P+ YT L C G K GKE+H V++ + +++ V NALI M
Sbjct: 234 LFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 292
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG + +A + M D ++WN++I GY +N Y + L F M D +++
Sbjct: 293 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 352
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+S+I+AS + + G E+H YVIK G+ ++ V N LI MY + F RM
Sbjct: 353 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 412
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SWTT+I+ Y + +A+E ++ + + DE+ + S+L A + L ++ + ++
Sbjct: 413 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 472
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R GL+ +I N L+D+Y KC+ + A VF I K+V+SWTS+I LN
Sbjct: 473 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 531
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA+ FR+M+ L +SV L+ ILSA A + AL G+EIH + LR G +G + A+
Sbjct: 532 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 591
Query: 541 LDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY CG ++ A F+ ER + + ++ Y G G A E F KM
Sbjct: 592 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 642
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 224/479 (46%), Gaps = 16/479 (3%)
Query: 42 KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
K Q+ ++L N + + T N S + N ++AL++ M DE ++ ++
Sbjct: 298 KMPQAERILRQMNNADVVTWN--SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 355
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ G+ LH+ V K ++++GN + M+ K + F +M D+DL
Sbjct: 356 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 415
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW +I GYA+ EAL L+ R ++ D +LR + + KE+H
Sbjct: 416 ISWTTVIAGYAQNDCHVEALELF-RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 474
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H++R G D + N L+ +Y KC ++ A VF+ + +D +SW +MIS NG +
Sbjct: 475 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 533
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M E + D + L ++SA+ + GRE+H Y+++ GF + S+ ++
Sbjct: 534 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 593
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + + VF R+E K ++ +T+MI+ Y AVE + M E PD I+
Sbjct: 594 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 653
Query: 402 IASVLSACACLGNLDLG-----IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
++L AC+ G LD G I H+ + Y+ L+DM + C+ +A E
Sbjct: 654 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 709
Query: 457 FHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG 513
+ + W +++ R ++ I ++ +L L+P N LV + + A G
Sbjct: 710 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR-LLELEPKNPGNLVLVSNVFAEQG 767
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
EKVF M + +W TMI Y + P A+ Y M EG + ++L ACA L
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSI 471
++ G +LH L ++ G S I N L+ MY+K + A +F +K + + W SI
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ + +S E L FR+M M PNS T+VS L+AC GKEIHA L+
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278
Query: 531 -AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + ++ NAL+ MY RCG+M A N DV WN L+ GY + A EFF
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 338
Query: 589 KMI 591
MI
Sbjct: 339 DMI 341
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 281/516 (54%), Gaps = 4/516 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEW-KRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
Q L M N+ DE +++R C K + +H+ + S + N
Sbjct: 94 QVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPL 153
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ ++ K G + A VF ++ +D SW +I G ++ G DEA+ L+ +M V P
Sbjct: 154 IDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH-KSAVIPT 212
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
Y F VL C + K G+++H ++++G ++ V NAL+T+Y + G+L+ A +F
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +RDRIS+N++ISG + G + L LF M+ + PD +T++S++SA VG
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+++H YVIKMG S D+ + L+ +Y+ + E + F E+++VV W M+ Y
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
++ + M+ EG MP++ T S+L C LG LDLG ++H +++G + +
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+ LIDMY+K +D A + ++ +++V+SWT++I G ++ EAL F++M +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ +++ S +SACA I AL G++IHA + G + D + NAL+ +Y RCGR + A+
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYL 572
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + +D +WN L++G+A+ G A + F +M
Sbjct: 573 AFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQM 608
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 256/477 (53%), Gaps = 4/477 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K+ LG+ + +++ G++ +A +F + ++ WN +I G
Sbjct: 32 LHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKL 91
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ L L+ M V PD TF VLR C GG + +++H +I G+ + V
Sbjct: 92 ASQVLGLFSLMI-TENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVC 150
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N LI +Y K G + A+LVF+ + +D +SW AMISG +NG + ++LF M + V
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P SSV+SA + KLG ++HG+++K G S + VCN L+ +Y +GN E++
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
FS+M +D +S+ ++IS D+A++ ++ M+ + PD +T+AS+LSACA +G
Sbjct: 271 FSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +LH ++ G+ S +II +L+D+Y KC I+ A E F +NV+ W +++
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 476 -RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+L N S IF + + L PN T SIL C +GAL G++IH ++ G F+
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ + L+DMY + G + A E DV +W ++ GY + A A + F++M
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM 507
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 267/523 (51%), Gaps = 3/523 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG ++A+ M + + +++ C + G LH + K
Sbjct: 188 LSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSE 247
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ NA ++++ ++G+L A +F KM RD S+N LI G A+ GF D AL L+++M
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM-Q 306
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ +KPD T +L C V +GK++H +VI+ G +D+ + +L+ +YVKC D+
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A F + + WN M+ Y + G + +F+ M+ + P+ T S++
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG ++H VIK GF +V VC+ LI MY G + + R+ +DVVSWT
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTA 486
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y L +A++ +Q ME +G D I +S +SACA + L+ G ++H + +G
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ I N L+ +Y++C A F +I K+ ISW ++I G + EAL F
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606
Query: 490 KM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M ++ N T S +SA A + GK+IHA ++ G + N L+ +Y +CG
Sbjct: 607 QMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCG 666
Query: 549 RMKPAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A + F E++V +WN ++TGY++ G G+ A F +M
Sbjct: 667 SIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 709
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 239/451 (52%), Gaps = 2/451 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G ++AL+ + MQ + D + +L+ C +G LHS V K
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIK 342
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + L ++VK D+ A F ++ WNV++ Y + G E+ +
Sbjct: 343 MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + G+ P+ YT+P +LRTC + L G+++H VI+ G++ +V V + LI MY
Sbjct: 403 FLQM-QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA 461
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G+L AR + + + D +SW AMI+GY ++ + + L LF M + D + SS
Sbjct: 462 KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + G+++H G+S+D+S+ N L+ +Y G ++ F ++++KD
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW +IS + S ++A++ + M G + T S +SA A N+ G ++H
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 641
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++TG S +N LI +YSKC I+ A F ++P+KNV+SW ++I G + E
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSE 701
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
A+ F +M L L PN VT V +LSAC+ +G
Sbjct: 702 AVSLFEEMKQLGLMPNHVTFVGVLSACSHVG 732
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 221/436 (50%), Gaps = 4/436 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+L ++ MQ + ++ +++R C D G +H+ V K+ +V +
Sbjct: 394 GNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVC 453
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + M+ K G+L A + ++ + D+ SW +I GY + F EAL L+Q M G+
Sbjct: 454 SVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM-ENQGI 512
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D F + C G+ L +G+++H GY D+ + NAL+++Y +CG A L
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYL 572
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ + +D ISWNA+ISG+ ++G + L +F M + V+ + T S +SA+ +
Sbjct: 573 AFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTAN 632
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G+++H +IK G+ + N LI +Y G+ E+ ++ F M K+VVSW MI+
Sbjct: 633 IKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITG 692
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLIS 432
Y +AV ++ M+ G MP+ +T VLSAC+ +G ++ G+ ++ GL+
Sbjct: 693 YSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVP 752
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++D+ + + A E ++P + + + W +++ + +++ E F +
Sbjct: 753 KPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTV-HKNIEIGEFAARH 811
Query: 492 MLNLKPNSVTLVSILS 507
+L L+P +LS
Sbjct: 812 LLELEPEDSATYVLLS 827
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 214/399 (53%), Gaps = 5/399 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++ +V T+ + C L K++H + + G++ + + + LI +Y+ G++ A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SEL 310
+FD +P + WN +ISG + L LF +M V PD T +SV+ A S
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
++ ++H +I GF VCNPLI +Y G+ + + VF R+ KD VSW M
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + D+A+ + M +P +SVLSAC + LG +LH ++ GL
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + N L+ +YS+ + A ++F ++ ++ IS+ S+I GL S AL F K
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L+ +KP+ VT+ S+LSACA +GA GK++H++ +++G++ D + +LLD+YV+C
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
++ A F + E +V WN++L Y + G L+E ++
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGN--LSESYW 401
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 3/277 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+++H + K GF + + + LI +YL+ G + K+F + S +V W +IS
Sbjct: 29 AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLA 88
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGLISYII 435
L + + + +M E PDE T ASVL AC+ + ++H + G S +
Sbjct: 89 KKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPL 148
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N LID+YSK +D A VF ++ K+ +SW ++I GL N R EA++ F +M +
Sbjct: 149 VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ P S+LSAC +I G+++H ++ G++ + F+ NAL+ +Y R G + A
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE 268
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + RD ++N L++G A+RG A + F KM
Sbjct: 269 QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
ME G + T + C G+L KLH ++G ++ + LID+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+D A+++F IP NV W +I GL + + L F M+ N+ P+ T S+L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 509 CARIGA-LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
C+ A ++IHA + G + N L+D+Y + G + A F +D +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDS 593
W +++G ++ G+ A F +M S
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKS 207
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 279/525 (53%), Gaps = 9/525 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL SM+ + +E AL +++ R G +H++ T V +
Sbjct: 81 NGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVR---FGAQVHALAVATRLIQDVFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+ FG + A +F + +R+ SWN +I Y K +A+ +++ M W
Sbjct: 138 TNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVW-S 196
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ + F CV+ C G D + G++VH V+R GY+ DV NAL+ MY K GD+ A
Sbjct: 197 GERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMA 256
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+VF+ +P D +SWNA+I+G +G + L L + M+ + V P+ TLSSV+ A
Sbjct: 257 AVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGA 316
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++HG++IK D V L+ MY G ++ KVF M +D++ W +I
Sbjct: 317 GAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPD--EITIASVLSACACLGNLDLGIKLHQLAMRTG 429
S + + + M EG D T+A+VL + A L + ++H LA + G
Sbjct: 377 SGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIG 436
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L+S + N LID Y KC +D A++VF + ++IS TS++ L + +A+ F
Sbjct: 437 LLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFV 496
Query: 490 KMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M+ L+P+S L S+L+ACA + A GK++HAH ++ D F NAL+ Y +CG
Sbjct: 497 QMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCG 556
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ A F+ E+ V +W+ ++ G A+ G G A E F +M+D
Sbjct: 557 SIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLD 601
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 244/478 (51%), Gaps = 9/478 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R ++ G +H +V +T V NA + M+ K GD+ A VF K+ D
Sbjct: 208 VVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAAD 267
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G G AL L +M +G V P+V+T VL+ C G G+++H
Sbjct: 268 VVSWNALIAGCVTHGHDHRALELLLQMKPLG-VVPNVFTLSSVLKACAGAGAFNLGRQIH 326
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ ++D V L+ MY K G L AR VFD MP+RD I WNA+ISG +G +
Sbjct: 327 GFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 386
Query: 281 KGLMLFIMMREVLVDPDF--MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L LF MR+ +D D TL++V+ ++ + ++VH K+G D V N
Sbjct: 387 EVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNG 446
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI Y G + KVF S D++S T+M++ + A++ + M +G PD
Sbjct: 447 LIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPD 506
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++S+L+ACA L + G ++H ++ S + N L+ Y+KC I+ A F
Sbjct: 507 SFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFS 566
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+P+K V+SW+++I GL + AL F +M+ + PN++TL S+LSAC G +
Sbjct: 567 GLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDD 626
Query: 518 GKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
K+ + +++ D + ++D+ R G++K A N+ + + + W LL
Sbjct: 627 AKK-YFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALL 683
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 189/395 (47%), Gaps = 8/395 (2%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T L G L G +H H+++ G A N L++ Y +C AR VFD +
Sbjct: 6 TIGSALARFGASRSLLAGAHLHSHLLKSGLLASYS--NHLLSFYSRCRLPSAARAVFDEI 63
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P +SW+++++ Y NG L F MR V + L V+ + D + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAP---DVRFGA 120
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGS 377
+VH + DV V N L+ MY FG +E +++F ++ VSW MIS Y +
Sbjct: 121 QVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKN 180
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
AV ++ M G P+E + V++AC + + G ++H + +RTG + A
Sbjct: 181 DRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTA 240
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLK 496
N L+DMYSK I+ A VF +IP +V+SW ++I G + AL +M L +
Sbjct: 241 NALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVV 300
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN TL S+L ACA GA G++IH ++ D F+ L+DMY + G + A
Sbjct: 301 PNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKV 360
Query: 557 FN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ RD+ WN L++G + G+ F +M
Sbjct: 361 FDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 395
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 193/410 (47%), Gaps = 5/410 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +AL+ L M+ L + + L ++++ C ++ G +H + K + +
Sbjct: 281 HGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFV 340
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ M+ K G L A VF M RDL WN LI G + G E LSL+ RM G
Sbjct: 341 AVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM-RKEG 399
Query: 193 VKPDV--YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ DV T VL++ + + K+VH + G +D VVN LI Y KCG L
Sbjct: 400 LDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDY 459
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ D IS +M++ + + LF+ M ++PD LSS+++A
Sbjct: 460 AIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACAS 519
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + G++VH ++IK F+ DV N L+ Y G+ E+ + FS + K VVSW+ M
Sbjct: 520 LSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAM 579
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTG 429
I +A+E + M EG P+ IT+ SVLSAC G +D K + G
Sbjct: 580 IGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFG 639
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ +ID+ + + A+E+ + +P N W +++ RLN
Sbjct: 640 IDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGASRLN 689
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI S L+ +L G LH +++GL++ +N L+ YS+C+ A VF +I
Sbjct: 6 TIGSALARFGASRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEI 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACA---RIGALMC 517
PD +SW+S++ N +AL FR M P + + I+ CA R GA
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVRFGA--- 120
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYA 575
++HA A+ + D F+ NAL+ MY G + A F+ ER+ +WN +++ Y
Sbjct: 121 --QVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYV 178
Query: 576 ERGQGALAEEFFRKMI 591
+ + A FR+M+
Sbjct: 179 KNDRCRDAVGVFREMV 194
>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
Length = 660
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 255/498 (51%), Gaps = 13/498 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V + + + E YL + ++ L + LGNA ++MF A VF +
Sbjct: 43 VTFINASQGAKTPPEAKYLETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHN 102
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++ SWN ++ Y++ G F+E ++L+++M VKPD TF VL +C + +L+ GK
Sbjct: 103 KNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKL 162
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + G E V V LI MY KC L AR +F P D ++W MIS Y +NG
Sbjct: 163 AHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGR 222
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ + LF M V PD + ++ + A + + GR V ++++G + +V N
Sbjct: 223 PQEAIALFFRM---TVPPDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANA 279
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
++ +Y E ++F RM +D VSW TM++ Y + ++ ++ M+ EG P
Sbjct: 280 VLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPS 339
Query: 399 EITI----ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
E+++ SVLS+CA L NL G H A+ GL + +A TLI MYSKC C+++A
Sbjct: 340 EVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEAR 399
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIG 513
++F + P +V++WT +I N R EA+ +FFR + + P+ V + L ACAR
Sbjct: 400 DIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFR---ITVPPDGVGFATALEACARAE 456
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
L G + A + +G+ + + +A+LD+Y +C + F+ +RD +WN ++
Sbjct: 457 NLEAGV-VRAKIVELGLDAERAVADAVLDLYGKCAEIVETAEIFDRMRQRDRVSWNTMVA 515
Query: 573 GYAERGQGALAEEFFRKM 590
YA G A + FR M
Sbjct: 516 AYARAGHTAGSLWCFRAM 533
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 231/480 (48%), Gaps = 16/480 (3%)
Query: 40 SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL-NICVDEDAL 98
SS+ ++ +V + + +I + N + L+ NG E+ + M + D+
Sbjct: 87 SSQACEARRVFDATHNKNIVSWN--AMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTF 144
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+++ C EG H+ + +V + + M+ K L A +F +
Sbjct: 145 ASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPS 204
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
D+ +W V+I YA+ G EA++L+ RM V PD F L C +L+ G+
Sbjct: 205 SDVVAWTVMISAYAQNGRPQEAIALFFRM----TVPPDGVAFATALGACASAENLEAGRV 260
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
V ++ G +A+ V NA++ +Y KC ++V +F M +RDR+SWN M++ Y G
Sbjct: 261 VRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGH 320
Query: 279 YMKGLMLFIMMREVLVDPDFMTL----SSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
L F M+ V P ++L +SV+S+ + + + G+ H ++ G V
Sbjct: 321 TAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLEFAVP 380
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V LI+MY EE +FSR S DVV+WT MIS Y + P +A+ + +
Sbjct: 381 VAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRITVP- 439
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD + A+ L ACA NL+ G+ ++ + GL + +A+ ++D+Y KC I +
Sbjct: 440 --PDGVGFATALEACARAENLEAGVVRAKI-VELGLDAERAVADAVLDLYGKCAEIVETA 496
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
E+F ++ ++ +SW +++ + +L FR M L + P+ V+LVS+LS + G
Sbjct: 497 EIFDRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSVLSTYSHAG 556
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 9/241 (3%)
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ +VV+W I S A++T++ + +G +PD +T ++A
Sbjct: 3 DKTNVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTF---INASQGAKTPPEAK 59
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
L +G+ I + N LI+M+ +A VF +KN++SW +++ N
Sbjct: 60 YLETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNG 119
Query: 480 RSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
E + F++M +KP+ +T S+LS+CA + L GK HA A+ G+ F +
Sbjct: 120 HFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVA 179
Query: 538 NALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERG--QGALAEEFFRKMIDSK 594
L+ MY +C ++ A + F+ S DV AW ++++ YA+ G Q A+A FFR +
Sbjct: 180 ATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIA-LFFRMTVPPD 238
Query: 595 G 595
G
Sbjct: 239 G 239
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 285/543 (52%), Gaps = 7/543 (1%)
Query: 56 SSIATKNP-NSRLNELCLNGSLEQALKYLD-SMQELNICVDEDALVNLVRLCEWKRGYDE 113
S+++ + P NS + LC ++AL+ D ++ N + +LV C R D
Sbjct: 118 SNLSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDY 177
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+H V K+ S+ L N ++M+ K G + A VF M ++ SW +I GY++
Sbjct: 178 AKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQ 237
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G ++A+ +Y +M G PD TF V++ C D+ G+++H HVI+ + +
Sbjct: 238 NGQANDAIIMYIQMTRSGQF-PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLT 296
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREV 292
NALI+MY G + A VF +P +D ISW MI+GY + G ++ L LF ++R+
Sbjct: 297 SQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQG 356
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P+ SV SA + + + G++VHG +K G +V L MY FG
Sbjct: 357 TYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSA 416
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ F ++++ D+VSW +I+ + + ++A++ ++ M G PD IT S+L C
Sbjct: 417 KMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSP 476
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
L+ G ++H ++ G I + N+L+ MY+KC + AL VF I + N++SW +I
Sbjct: 477 VRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAI 536
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ + E +++M + KP+S+T+ ++L CA + +L G ++H ++++ G+
Sbjct: 537 LSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGL 596
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRK 589
D + N L+DMY +CG +K A + F+S + D+ +W+ L+ GYA+ G G A FR
Sbjct: 597 ILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRI 656
Query: 590 MID 592
M +
Sbjct: 657 MTN 659
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 275/553 (49%), Gaps = 22/553 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A+ M D+ ++++ C D G LH+ V K+ +
Sbjct: 238 NGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTS 297
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +SM+ FG + HA VF ++ +DL SW +I GY + G+ EAL L++ + G
Sbjct: 298 QNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGT 357
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P+ + F V C + +L+ GK+VH ++FG +V +L MY K G L A+
Sbjct: 358 YQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAK 417
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ F + D +SWNA+I+ + +NG+ + + F M + + PD +T S++
Sbjct: 418 MAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPV 477
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
GR++H Y++K+GF +++VCN L+ MY + + VF + + ++VSW ++
Sbjct: 478 RLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAIL 537
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + Y+ M G+ PD ITI ++L CA L +L +G ++H ++++GLI
Sbjct: 538 SACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLI 597
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N LIDMY+KC + A +VF + +++SW+S+I+G EAL FR M
Sbjct: 598 LDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIM 657
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIH-AHALRIGVAFDGFLPNALLDMYVRCGR 549
L ++PN VT + LSAC+ IG + G ++ + G+ + ++D+ R G
Sbjct: 658 TNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGC 717
Query: 550 MKPA--WNQFNSNERDVSAWNILLTG--------YAERGQGAL---------AEEFFRKM 590
+ A + Q + + D++AW LL AERG G + A +
Sbjct: 718 LHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNI 777
Query: 591 IDSKGNWRKLMGL 603
S GNW ++ L
Sbjct: 778 HASAGNWEEVAKL 790
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 200/420 (47%), Gaps = 32/420 (7%)
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EA+SLY + W+ G++ F + R +H++ F Y + + +
Sbjct: 61 EAMSLYYALEWLSGMR-----FSNITRV--------------LHILLFKYIISMTIHSVF 101
Query: 239 ITMYVKCGDLVRARL---VFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
MY V+ L +F + K + N+ I + Y + L F ++
Sbjct: 102 RRMY----SYVKPSLQPAIFSNLSK--ELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNS 155
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ T +S++ A +++H +V+K + + + N +I MY G+ ++ K
Sbjct: 156 HFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARK 215
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M+ +VVSWT+MIS Y + + A+ Y M G PD++T SV+ AC G+
Sbjct: 216 VFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+DLG +LH +++ ++ N LI MY+ I+ A VF +IP K++ISW ++I G
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITG 335
Query: 475 LRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
EAL FR ++ +PN S+ SAC+ + L GK++H ++ G+
Sbjct: 336 YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRR 395
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ F +L DMY + G + A F D+ +WN ++ +A+ G A +FFR+MI
Sbjct: 396 NVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMI 455
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 251/457 (54%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F KF + A VF + + ++ ++ GYAK +A+ Y+RM V P
Sbjct: 82 LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERM-RCDEVMP 140
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ G DL+RG+E+H VI G+++++ + A++ +Y KC + A +F
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ MP+RD +SWN +++GY +NG + + + + M+E PD +TL SV+ A + +
Sbjct: 201 ERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+GR +HGY + GF V+V ++ Y G+ VF M S++VVSW TMI Y
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYA 320
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++A T+ M EG P +++ L ACA LG+L+ G +H+L + +
Sbjct: 321 QNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS 380
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N+LI MYSKCK +D A VF + K V++W ++ILG N EAL F +M +
Sbjct: 381 VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD 440
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP+S TLVS+++A A + K IH A+R + + F+ AL+D + +CG ++ A
Sbjct: 441 IKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTAR 500
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ER V WN ++ GY G G A + F +M
Sbjct: 501 KLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEM 537
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 247/485 (50%), Gaps = 5/485 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +L A+++ + M+ + L++L G +H +V ++
Sbjct: 120 NSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFA 179
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A ++++ K + A+ +F +M RDL SWN ++ GYA+ GF A+ + +M G
Sbjct: 180 MTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQM-QEAG 238
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KPD T VL + L+ G+ +H + R G+E V+V A++ Y KCG + AR
Sbjct: 239 QKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSAR 298
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF GM R+ +SWN MI GY +NGE + F+ M + V+P +++ + A +G
Sbjct: 299 LVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG 358
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + GR VH + + DVSV N LI MY + VF ++ K VV+W MI
Sbjct: 359 DLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMIL 418
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + ++A+ + M++ PD T+ SV++A A L +H LA+RT +
Sbjct: 419 GYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDK 478
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + LID ++KC I A ++F + +++VI+W ++I G N EAL F +M
Sbjct: 479 NVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQ 538
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
++KPN +T +S+++AC+ G + G + +++ + + + A++D+ R GR
Sbjct: 539 NGSVKPNEITFLSVIAACSHSGLVEEGM-YYFESMKENYGLEPTMDHYGAMVDLLGRAGR 597
Query: 550 MKPAW 554
+ AW
Sbjct: 598 LDDAW 602
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 198/399 (49%), Gaps = 11/399 (2%)
Query: 184 YQRMFWVGGVKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
YQR+F + VY P +L C + +L ++ +I+ G+ + LI++
Sbjct: 33 YQRIF----IPSHVYRHPSAILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISL 85
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+ K + A VF+ + + + ++ M+ GY +N + + MR V P
Sbjct: 86 FCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDF 145
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ ++ S D + GRE+HG VI GF ++ ++ +Y E+ K+F RM
Sbjct: 146 TYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQ 205
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+VSW T+++ Y + +AV+ M+ G PD IT+ SVL A A L L +G +
Sbjct: 206 RDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSI 265
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A R G + +A ++D Y KC + A VF + +NV+SW ++I G N S
Sbjct: 266 HGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGES 325
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA F KM+ ++P +V+++ L ACA +G L G+ +H + FD + N+L
Sbjct: 326 EEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSL 385
Query: 541 LDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
+ MY +C R+ A + F N + V WN ++ GYA+ G
Sbjct: 386 ISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNG 424
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 193/403 (47%), Gaps = 2/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A++ + MQE D LV+++ + G +H + V +
Sbjct: 221 NGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNV 280
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L + K G + A VF M R++ SWN +I GYA+ G +EA + + +M G
Sbjct: 281 ATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKML-DEG 339
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P + L C + DL+RG+ VH + DV V+N+LI+MY KC + A
Sbjct: 340 VEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAA 399
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + + ++WNAMI GY +NG + L LF M+ + PD TL SVI+A +
Sbjct: 400 SVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLS 459
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ + +HG I+ +V VC LI + G + K+F M+ + V++W MI
Sbjct: 460 VTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMID 519
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMRTGLI 431
Y + +A++ + M+ P+EIT SV++AC+ G ++ G+ + GL
Sbjct: 520 GYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLE 579
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ ++D+ + +D A + +P K I+ +LG
Sbjct: 580 PTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 8/290 (2%)
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
+IK GF ++ LI ++ F + E +VF +E K V + TM+ Y + A
Sbjct: 67 IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLI 441
V Y+ M + MP +L NLDL G ++H + + G S + ++
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSG--ENLDLRRGREIHGMVITNGFQSNLFAMTAVV 184
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
++Y+KC+ I+ A ++F ++P ++++SW +++ G N + A+ +M KP+S+
Sbjct: 185 NLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSI 244
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
TLVS+L A A + AL G+ IH +A R G + + A+LD Y +CG ++ A F
Sbjct: 245 TLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGM 304
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ R+V +WN ++ GYA+ G+ A F KM+D + +MG C
Sbjct: 305 SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHAC 354
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG E+A M + + +++ + C + G Y+H ++ +
Sbjct: 313 NTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ +SM+ K + A VFG + + + +WN +I GYA+ G +EAL+L
Sbjct: 373 KKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNL 432
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +KPD +T V+ + ++ K +H IR + +V V ALI +
Sbjct: 433 FCEM-QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHA 491
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR +FD M +R I+WNAMI GY NG + L LF M+ V P+ +T S
Sbjct: 492 KCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLS 551
Query: 304 VISASELVG 312
VI+A G
Sbjct: 552 VIAACSHSG 560
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 271/525 (51%), Gaps = 13/525 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K + M + + L +++R C +++G +H++V + + NA
Sbjct: 294 EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAA 353
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S++ K + A VF + +D SWN ++ YAK G F +A+ L ++M V G PD
Sbjct: 354 SLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQM-QVEGFVPDD 412
Query: 198 YTFPCVLRTC---------GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
TF +L +C G L G++VH +I G + D + N L+ MY +CG L
Sbjct: 413 ITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSL 472
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR F G+ +R+ SW +IS +NGE +GL L M + + +T S++ A
Sbjct: 473 DDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGAC 532
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ GD LG+ +H + G D+ N L+ MY + + +E VF RM +DVVSWT
Sbjct: 533 SVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWT 592
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS Y + P +A++ Y+ ME E S PD +T+ SVL ACA L L G +H+ + +
Sbjct: 593 IIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVAS 652
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G+ + + + ++ Y KC+ ++ A +VF +I DK+++ W ++I N+ +A +
Sbjct: 653 GVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALY 712
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR- 546
+M+ N + PN VTL+++L +C+ + G +H A G + NAL++MY +
Sbjct: 713 LEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKC 772
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG ++ A F S ++V +W+ ++ YA G+ A F M
Sbjct: 773 CGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTM 817
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 274/534 (51%), Gaps = 16/534 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G LE A M + + +E + ++ C + G ++H + + S+R+
Sbjct: 190 HGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRM 249
Query: 133 GNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N+ +SM+ K A VF ++ + SW+ I Y G EA+ ++ M +
Sbjct: 250 ENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMN-LE 305
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVKP+ T VLR C V ++G+ +H V+ Y + V+NA ++Y KC + A
Sbjct: 306 GVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADA 365
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD---FMTLSSVISAS 308
VF +P +D +SWNA++S Y + G + + L M+ PD F+T+ S S
Sbjct: 366 SRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQS 425
Query: 309 ELV---GDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
L+ G+ K GR+VH +I G D + N L++MY G+ ++ F + +
Sbjct: 426 ALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR 485
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+V SWT +IS + + +E + M+ EG+ ++IT S+L AC+ G+L LG +H
Sbjct: 486 NVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIH 545
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ GL S II +N L++MY+ C+ +D+A VF ++ ++V+SWT II
Sbjct: 546 ERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPL 605
Query: 483 EALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EAL +R+M +P++VTL+S+L ACA + AL+ GK IH + GV D F+ A++
Sbjct: 606 EALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVV 665
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
Y +C ++ A F+ ++D+ WN ++ YA+ A + +M++++
Sbjct: 666 SFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQ 719
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 212/390 (54%), Gaps = 6/390 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV D T + C + D +GK++H ++ G A V + N+L+ MY KCG + A
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R FD MP+RD ISWNAMI+ Y ++ + + L+ R PD +T +S+++A
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD K GR +H + + F D VCN LI MY G+ ++ VF DV +WTT+I
Sbjct: 125 GDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + A T+ M EG +EIT +VL C+ L L+ G +H+LA+ +GL
Sbjct: 185 AAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD 244
Query: 432 SYIIIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + N+LI MY KC + D+A EVF +I +VISW++ I + +EA+ F
Sbjct: 245 FSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFEL 301
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L +KPN+ TL S+L ACA +GA G+ IHA L + + NA +Y +C R
Sbjct: 302 MNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSR 361
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
+ A F+S +D +WN +++ YA++G
Sbjct: 362 VADASRVFSSIPCKDAVSWNAIVSAYAKQG 391
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 246/509 (48%), Gaps = 16/509 (3%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE L+N V C +G +H+ + + SV L N+ + M+ K G + A F
Sbjct: 9 DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M +RDL SWN +I YA+ +A+ LY + G KPD TF +L C DL
Sbjct: 69 DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSR-LEGTKPDEVTFASLLNACFASGDL 127
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
K G+ +H H + + +D V N LI+MY CG L A VF+ + D +W +I+ Y
Sbjct: 128 KFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAY 187
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+G+ + M + + + +T +V+ + + G+ VH + G +
Sbjct: 188 TRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSL 247
Query: 334 SVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ N LI MY +E +VF R+ V+SW+ I+ Y +A++T+++M
Sbjct: 248 RMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFELMNL 304
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG P+ T+ SVL ACA +G + G ++H L + + N +Y+KC +
Sbjct: 305 EGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVAD 364
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A VF IP K+ +SW +I+ +A+ R+M + P+ +T ++IL +C++
Sbjct: 365 ASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQ 424
Query: 512 IG---------ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
+L G+++H+ + G+ D +L N L+ MY RCG + A F ++
Sbjct: 425 SALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQ 484
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+V +W IL++ + G+ + E + M
Sbjct: 485 RNVFSWTILISLLVQNGEASEGLELLKSM 513
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 228/469 (48%), Gaps = 16/469 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +SM+ G L A VF D+ +W +I Y + G + A + + +M G+
Sbjct: 150 NGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQ-EGL 208
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV-RAR 252
+ + TF VL TC + L+ GK VH + G + + + N+LI+MY KC AR
Sbjct: 209 RSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAR 268
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + + ISW+A I+ Y G++ + + F +M V P+ TL+SV+ A VG
Sbjct: 269 EVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVG 325
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR +H V+ ++ + +V N +Y + +VFS + KD VSW ++S
Sbjct: 326 AHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVS 385
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA------CLGN---LDLGIKLHQ 423
Y L A+ + M+ EG +PD+IT ++L +C+ GN L G ++H
Sbjct: 386 AYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHS 445
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ GL + N L+ MY +C +D A F I +NV SWT +I L N + E
Sbjct: 446 QMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASE 505
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L + M L + N +T +S+L AC+ G L GK IH G+ D NALL+
Sbjct: 506 GLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLN 565
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY C + A F RDV +W I+++ YA G A + +R+M
Sbjct: 566 MYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRM 614
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 228/476 (47%), Gaps = 22/476 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LGN + M+ + G L A F + R++FSW +LI + G E L L + M +
Sbjct: 458 LGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMD-LE 516
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + + TF +L C DL GK +H + G E+D+ NAL+ MY C L A
Sbjct: 517 GTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEA 576
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RLVF+ M RD +SW +IS Y G ++ L L+ M + PD +TL SV+ A +
Sbjct: 577 RLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASL 636
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+ +H ++ G DV V ++ Y E+ +VF R+ KD+V W MI
Sbjct: 637 RALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMI 696
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +KA Y M P+++T+ ++L +C+ ++ G LH+ A G +
Sbjct: 697 GAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYL 756
Query: 432 SYIIIANTLIDMYSKCKC--IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S+ + N LI+MY+KC C ++ A F + KNV+SW+SI+ N A F
Sbjct: 757 SHTSVVNALINMYAKC-CGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFW 815
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA-----HALRIGVAFDGFLPNALLDM 543
M + + PN VT S+L AC+ G G H L G + N L
Sbjct: 816 TMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLL--- 872
Query: 544 YVRCGRMKPAWNQFNSN--ERDVSAWNILLTG---YAERGQGALAEEFFRKMIDSK 594
+ GR+K A + ++ + D SAW LL + ++ GALA ++++D++
Sbjct: 873 -AKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAA---KQLLDAE 924
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 169/350 (48%), Gaps = 2/350 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG + L+ L SM ++ ++L+ C G +H +
Sbjct: 497 LVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESD 556
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ NA L+M+ L A VF +M RD+ SW ++I YA AG+ EAL LY+RM
Sbjct: 557 IITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQ 616
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+PD T VL C + L GK +H ++ G E DV V A+++ Y KC +
Sbjct: 617 EFS-RPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVE 675
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD + +D + WNAMI Y +N K L++ M E + P+ +TL +++ +
Sbjct: 676 DARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCS 735
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS-FGNREEGEKVFSRMESKDVVSWT 368
+ G +H G+ SV N LI MY GN E + F + SK+VVSW+
Sbjct: 736 STCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWS 795
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
++++ Y + D+A + M +G +P+ +T SVL AC+ G D G
Sbjct: 796 SIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEG 845
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 2/203 (0%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M+ EG DEIT+ + +SACA LG+ G ++H + +GL + ++++N+L+ MY KC
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
+++A F ++P++++ISW ++I + +A+ + L KP+ VT S+L+A
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAW 567
C G L G+ +H H L D + N L+ MY CG + A F + R DV W
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTW 180
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
++ Y G+ A + KM
Sbjct: 181 TTVIAAYTRHGKLECAFATWSKM 203
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 258/471 (54%), Gaps = 7/471 (1%)
Query: 114 GLYLHSVVSKTMSHLSVR----LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
L+L +V +T L + +G+A + M+ G L A VF M +RD WNV++
Sbjct: 162 ALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMD 221
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
GY KAG A+ L+ R+ G P+ T C L C DL G ++H +++G E
Sbjct: 222 GYVKAGDVASAVGLF-RVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLE 280
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+V V N L++MY KC L A +F MP+ D ++WN MISG +NG L LF M
Sbjct: 281 PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDM 340
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++ + PD +TL+S++ A + K G+E+HGY+++ DV + + L+ +Y +
Sbjct: 341 QKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDV 400
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ VF +S DVV +TMIS Y + + + AV+ ++ + A G P+ + +AS L AC
Sbjct: 401 RMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPAC 460
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A + + +G +LH ++ + + L+DMYSKC +D + +F ++ K+ ++W
Sbjct: 461 ASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWN 520
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I N EAL FR+M++ +K N+VT+ SILSACA + A+ GKEIH ++
Sbjct: 521 SMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKG 580
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ D F +AL+DMY +CG ++ A F E++ +WN +++ Y G
Sbjct: 581 PIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHG 631
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 229/434 (52%), Gaps = 5/434 (1%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
WN LI G+ AG A+ Y +M W +PD +T P V+++C + L G+ V
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKM-WAHPSSPRPDGHTLPYVVKSCAALGALHLGRLV 169
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H G + D+ V +ALI MY G L AR VFDGM +RD + WN M+ GY + G+
Sbjct: 170 HRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDV 229
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ LF +MR DP+F TL+ +S D G ++H +K G +V+V N L
Sbjct: 230 ASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTL 289
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY EE ++F M D+V+W MIS + L D A+ + M+ G PD
Sbjct: 290 VSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDS 349
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T+AS+L A L G ++H +R + + + L+D+Y KC+ + A VF
Sbjct: 350 VTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDA 409
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG 518
+V+ +++I G LN S A+ FR ++ L +KPN+V + S L ACA + A+ G
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
+E+H + L+ ++ +AL+DMY +CGR+ + F+ + +D WN +++ +A+
Sbjct: 470 QELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529
Query: 578 GQGALAEEFFRKMI 591
G+ A + FR+MI
Sbjct: 530 GEPEEALDLFRQMI 543
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 222/437 (50%), Gaps = 4/437 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++ AL+ MQ+ + D L +L+ G+ +G +H + + +H+ V L
Sbjct: 327 NGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFL 386
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + ++ K D+ A VF D+ + +I GY + A+ +++ + +G
Sbjct: 387 VSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALG- 445
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ L C + ++ G+E+H +V++ YE V +AL+ MY KCG L +
Sbjct: 446 IKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSH 505
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F M +D ++WN+MIS + +NGE + L LF M V + +T+SS++SA +
Sbjct: 506 YMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLP 565
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+HG +IK D+ + LI MY GN E +VF M K+ VSW ++IS
Sbjct: 566 AIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIIS 625
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLI 431
Y L ++V+ M+ EG D +T +++SACA G + G++L + + +
Sbjct: 626 AYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIE 685
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++D+YS+ +DKA++ +P K + W +++ R+ +R+ E +
Sbjct: 686 PQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRV-HRNVELAEIASQ 744
Query: 491 MMLNLKPNSVTLVSILS 507
+ L P++ ++S
Sbjct: 745 ELFKLDPHNCGYYVLMS 761
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 1/263 (0%)
Query: 55 TSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
T SI ++ ++ LN E A+K + L I + + + + C G
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
LH V K + +A + M+ K G L + Y+F KM +D +WN +I +A+
Sbjct: 470 QELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G +EAL L+++M + GVK + T +L C G+P + GKE+H +I+ AD+
Sbjct: 530 GEPEEALDLFRQMI-MEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFA 588
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ALI MY KCG+L A VF+ MP+++ +SWN++IS Y +G + + L M+E
Sbjct: 589 ESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGF 648
Query: 295 DPDFMTLSSVISASELVGDEKLG 317
D +T ++ISA G + G
Sbjct: 649 KADHVTFLALISACAHAGQVQEG 671
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-----IIIANTLIDMYSK 446
A + P + ++L C +L LG+++H A+ +GL+ + L+ MY
Sbjct: 29 ATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVL 88
Query: 447 CKCIDKALEVFHQIP---DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSV 500
+ A+ VF +P + W +I G + A++F+ KM + +P+
Sbjct: 89 ARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGH 148
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
TL ++ +CA +GAL G+ +H +G+ D ++ +AL+ MY G + A F+
Sbjct: 149 TLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGM 208
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ERD WN+++ GY + G A A FR M
Sbjct: 209 DERDCVLWNVMMDGYVKAGDVASAVGLFRVM 239
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 246/415 (59%), Gaps = 5/415 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+M++K G + A VF M +RD+F+W +++ GYA+ G +EA +Y++M +
Sbjct: 14 NALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVYEQML-EERL 72
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF +L C + L++GK+VH +I+ G +D + N LI MY KCG++ +
Sbjct: 73 PLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAKCGNIRQGHT 132
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F M RD ++WN +I+G NG + + LF MRE + PD +T V++ +
Sbjct: 133 MFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYVCVLNVCSSL-- 190
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ GR +H Y+I+ G D+ V L+ MY + + E+ ++F ++ +++V+WT++I+
Sbjct: 191 -EQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPERNLVTWTSVIAA 249
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +P+KA Y+ M EG + D+ +VL CA +G+L+ G ++H +++G+ +
Sbjct: 250 YAQAGIPEKAWIFYEKMLKEGIVADKFAYTTVLHVCATMGDLEKGKQVHDHMVKSGIATD 309
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I+ +TLIDMY+KC D A ++ + +++V+S+T++I+G R EAL F M
Sbjct: 310 QILDSTLIDMYAKCGRTDIAHQLLEIMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQR 369
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+ + PN+VT V +L AC +G+L+ G+ IHA ++ G+A D L AL DMY +C
Sbjct: 370 DGVLPNTVTFVGVLKACTGLGSLVEGRRIHASIIKAGLAQDSSLKYALADMYAKC 424
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 201/366 (54%), Gaps = 5/366 (1%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ V+NAL+ MY+KCG + AR VFD M +RD +W M++GY G + ++
Sbjct: 5 GFVPSTFVLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVY 64
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M E + D +T ++++S + + G++VH +IK G D + N LI MY
Sbjct: 65 EQMLEERLPLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAKC 124
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
GN +G +F+ M+ +DVV+W +I+ + D+A E ++ M G PD++T VL
Sbjct: 125 GNIRQGHTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYVCVL 184
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ C+ +L+ G LH + GL + + L++MYS C+ ++ AL++F ++P++N++
Sbjct: 185 NVCS---SLEQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPERNLV 241
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+WTS+I +A IF+ KM+ + + ++L CA +G L GK++H H
Sbjct: 242 TWTSVIAAYAQAGIPEKAWIFYEKMLKEGIVADKFAYTTVLHVCATMGDLEKGKQVHDHM 301
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAE 584
++ G+A D L + L+DMY +CGR A +ERDV ++ L+ G+ +G+ A
Sbjct: 302 VKSGIATDQILDSTLIDMYAKCGRTDIAHQLLEIMDERDVVSYTALIVGHVRQGRFQEAL 361
Query: 585 EFFRKM 590
+ F M
Sbjct: 362 QTFSSM 367
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 205/383 (53%), Gaps = 4/383 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G LE+A + + M E + +D ++ +C R ++G +H + K H LG
Sbjct: 55 GHLEEAYRVYEQMLEERLPLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILG 114
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + M+ K G++ +F +M DRD+ +WN++I G A+ G+FDEA L++ M G+
Sbjct: 115 NTLIDMYAKCGNIRQGHTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMR-EAGL 173
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD T+ CVL C L++G+ +H ++I G E D+ V AL+ MY C L A
Sbjct: 174 KPDKVTYVCVLNVC---SSLEQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQ 230
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ +P+R+ ++W ++I+ Y + G K + + M + + D ++V+ +GD
Sbjct: 231 IFEKLPERNLVTWTSVIAAYAQAGIPEKAWIFYEKMLKEGIVADKFAYTTVLHVCATMGD 290
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G++VH +++K G + D + + LI MY G + ++ M+ +DVVS+T +I
Sbjct: 291 LEKGKQVHDHMVKSGIATDQILDSTLIDMYAKCGRTDIAHQLLEIMDERDVVSYTALIVG 350
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ +A++T+ M+ +G +P+ +T VL AC LG+L G ++H ++ GL
Sbjct: 351 HVRQGRFQEALQTFSSMQRDGVLPNTVTFVGVLKACTGLGSLVEGRRIHASIIKAGLAQD 410
Query: 434 IIIANTLIDMYSKCKCIDKALEV 456
+ L DMY+KC A EV
Sbjct: 411 SSLKYALADMYAKCSSWTDAQEV 433
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 142/266 (53%), Gaps = 5/266 (1%)
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
GF V N L+ MY+ G+ + +VF M +D+ +WT M++ Y ++A Y
Sbjct: 5 GFVPSTFVLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVY 64
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+ M E D +T ++LS CA L +L+ G K+H ++ G+ S I+ NTLIDMY+KC
Sbjct: 65 EQMLEERLPLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAKC 124
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSIL 506
I + +F ++ D++V++W II G N EA F M LKP+ VT V +L
Sbjct: 125 GNIRQGHTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYVCVL 184
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
+ C+ +L G+ +H++ + G+ D ++ ALL+MY C ++ A F ER++
Sbjct: 185 NVCS---SLEQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPERNLV 241
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
W ++ YA+ G A F+ KM+
Sbjct: 242 TWTSVIAAYAQAGIPEKAWIFYEKML 267
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 147/283 (51%), Gaps = 4/283 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++A + ++M+E + D+ V ++ +C ++G LHS + + L + +
Sbjct: 155 NGYFDEAFELFEAMREAGLKPDKVTYVCVLNVCS---SLEQGRILHSYIIEAGLELDLWV 211
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L+M+ L A +F K+ +R+L +W +I YA+AG ++A Y++M G
Sbjct: 212 GTALLNMYSNCRSLEDALQIFEKLPERNLVTWTSVIAAYAQAGIPEKAWIFYEKML-KEG 270
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + + VL C + DL++GK+VH H+++ G D + + LI MY KCG A
Sbjct: 271 IVADKFAYTTVLHVCATMGDLEKGKQVHDHMVKSGIATDQILDSTLIDMYAKCGRTDIAH 330
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + M +RD +S+ A+I G+ G + + L F M+ V P+ +T V+ A +G
Sbjct: 331 QLLEIMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGVLPNTVTFVGVLKACTGLG 390
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
GR +H +IK G + D S+ L MY + + ++V
Sbjct: 391 SLVEGRRIHASIIKAGLAQDSSLKYALADMYAKCSSWTDAQEV 433
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G + + N L++MY KC I A +VF + ++++ +WT ++ G EA
Sbjct: 4 SGFVPSTFVLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRV 63
Query: 488 FRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ +M+ P + VT +ILS CA + +L GK++H ++ G+ D L N L+DMY +
Sbjct: 64 YEQMLEERLPLDGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAK 123
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG ++ F +RDV WNI++ G A G A E F M
Sbjct: 124 CGNIRQGHTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAM 168
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 534 GFLP-----NALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFF 587
GF+P NALL+MY++CG + A F N ERD+ W ++LTGYA G A +
Sbjct: 5 GFVPSTFVLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVY 64
Query: 588 RKMIDSK 594
+M++ +
Sbjct: 65 EQMLEER 71
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 285/550 (51%), Gaps = 14/550 (2%)
Query: 55 TSSIATKNPN-SRLNELCLNGSLEQALKYLDSMQELNIC----VDEDALVNLVRLCEWKR 109
TS T +P RL+ LC +G+L AL L S + + ++A+ L+R C +
Sbjct: 47 TSHTKTHSPILQRLHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHK 106
Query: 110 GYDEGLYLHSVVSKTMS-HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
G +H++VS + V L ++M+ G + VF ++DLF +N L+
Sbjct: 107 NIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALL 166
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
GY++ F +A+SL+ + + PD +T PCV + C GV D++ G+ VH ++ G
Sbjct: 167 SGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGG 226
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-- 286
+D V NALI MY KCG + A VF+ M R+ +SWN+++ ENG + + +F
Sbjct: 227 FSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKR 286
Query: 287 --IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
I E LV PD T+ +VI A VG+ ++G VHG K+G +++V+V N L+ MY
Sbjct: 287 LLISEEEGLV-PDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYS 345
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIA 403
G E +F K+VVSW T+I Y E Q M+ E + +E+T+
Sbjct: 346 KCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVL 405
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+VL AC+ L ++H A R G + ++AN + Y+KC +D A VF + K
Sbjct: 406 NVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGK 465
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
V SW ++I N ++L F MM + P+ T+ S+L ACAR+ L CGKEIH
Sbjct: 466 TVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIH 525
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGA 581
LR G+ D F+ +L+ +Y++C M F+ E + + WN+++TG+++
Sbjct: 526 GFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPC 585
Query: 582 LAEEFFRKMI 591
A + FR+M+
Sbjct: 586 EALDTFRQML 595
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 257/515 (49%), Gaps = 6/515 (1%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
+E + D +V ++ C G+ +H + K V + N+ + M+ K G L
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
G A +F +++ SWN +I GY+K G F L Q M V+ + T VL
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPA 410
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C G L KE+H + R G+ D V NA + Y KC L A VF GM + SW
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
NA+I + +NG K L LF++M + +DPD T+ S++ A + + G+E+HG++++
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G D + L+ +Y+ + G+ +F +ME+K +V W MI+ + + LP +A++T
Sbjct: 531 NGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDT 590
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
++ M + G P EI + VL AC+ + L LG ++H A++ L + LIDMY+K
Sbjct: 591 FRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAK 650
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL--KPNSVTLVS 504
C C++++ +F ++ +K+ W II G ++ +A+ F ++M N +P+S T +
Sbjct: 651 CGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELF-ELMQNKGGRPDSFTFLG 709
Query: 505 ILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NE 561
+L AC G + G + + GV ++DM R G++ A N +E
Sbjct: 710 VLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDE 769
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
D W+ LL+ G + EE +K+++ + N
Sbjct: 770 PDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPN 804
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 270/511 (52%), Gaps = 60/511 (11%)
Query: 137 LSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+SM++ F A V ++ +F WN LI GF ++ L LY+RM +G +
Sbjct: 65 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGW-R 123
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD YTFP VL+ CG +P + G VH V G+E +V V N L++MY +CG AR V
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183
Query: 255 FDGMPKR---DRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASEL 310
FD M +R D +SWN++++ Y + G+ ++ + +F M E L + PD ++L +V+ A
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG G++VHGY ++ G +DV V N ++ MY G EE KVF RM+ KDVVSW M
Sbjct: 244 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 303
Query: 371 ISCYE---------------------------GSVLPD--------KAVETYQMMEAEGS 395
++ Y +V+ +A++ ++ M GS
Sbjct: 304 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGS 363
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-------SYIIIANTLIDMYSKCK 448
P+ +T+ S+LS CA G L G + H A++ L +++ N LIDMYSKCK
Sbjct: 364 EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 423
Query: 449 CIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLV 503
A +F IP D++V++WT +I G + + EAL F +M+ + PN+ T+
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDG---FLPNALLDMYVRCGRMKPAWNQF-NS 559
L ACAR+GAL G++IHA+ LR F+ F+ N L+DMY + G + A F N
Sbjct: 484 CALMACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 541
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++R+ +W L+TGY G+G A + F +M
Sbjct: 542 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEM 572
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 270/567 (47%), Gaps = 62/567 (10%)
Query: 44 AQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVR 103
A+++ VL + SS N + G LE L+ MQ L D +++
Sbjct: 75 AKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLK 134
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR---D 160
C + G +H+VV + +V +GN +SM+ + G +A VF +M +R D
Sbjct: 135 ACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGD 194
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN ++ Y + G A+ +++RM G++PD + VL C V RGK+VH
Sbjct: 195 LVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVH 254
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ +R G DV V NA++ MY KCG + A VF+ M +D +SWNAM++GY + G +
Sbjct: 255 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 314
Query: 281 KGLMLFIMMREVLV-----------------------------------DPDFMTLSSVI 305
L LF +RE + +P+ +TL S++
Sbjct: 315 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLL 374
Query: 306 SASELVGDEKLGREVHGYVIKMGFS-------DDVSVCNPLIKMYLSFGNREEGEKVFSR 358
S L G G+E H + IK + DD+ V N LI MY + + +F
Sbjct: 375 SGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 434
Query: 359 MESKD--VVSWTTMISCYEGSVLPDKAVETY-QMMEAEG-SMPDEITIASVLSACACLGN 414
+ KD VV+WT +I ++A+E + QM++ + MP+ TI+ L ACA LG
Sbjct: 435 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 494
Query: 415 LDLGIKLHQLAMRTGLISYII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G ++H +R S ++ +AN LIDMYSK +D A VF + +N +SWTS++
Sbjct: 495 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 554
Query: 474 GLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G ++ R EAL IF+ + L P+ VT V +L AC+ G + G G+
Sbjct: 555 GYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFN-----GMNK 609
Query: 533 D-GFLPNA-----LLDMYVRCGRMKPA 553
D G +P A ++D+ R GR+ A
Sbjct: 610 DFGVVPGAEHYACMVDLLSRAGRLDEA 636
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 236/500 (47%), Gaps = 53/500 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS + G +A+K + M E L I D +LVN++ C + G +H
Sbjct: 199 NSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYAL 258
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ V +GNA + M+ K G + A VF +M +D+ SWN ++ GY++ G FD+AL
Sbjct: 259 RSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALG 318
Query: 183 LYQ----------------------------------RMFWVGGVKPDVYTFPCVLRTCG 208
L++ R + G +P+V T +L C
Sbjct: 319 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA 378
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVD-------VVNALITMYVKCGDLVRARLVFDGMPKR 261
L GKE H H I++ D + V+NALI MY KC AR +FD +P +
Sbjct: 379 LAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 438
Query: 262 DR--ISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLG 317
DR ++W +I G ++GE + L LF M + V P+ T+S + A +G + G
Sbjct: 439 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 498
Query: 318 REVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
R++H YV++ F S + V N LI MY G+ + VF M ++ VSWT++++ Y
Sbjct: 499 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 558
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYII 435
++A++ + M+ G +PD +T VL AC+ G +D GI + + G++
Sbjct: 559 HGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 618
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLN 494
++D+ S+ +D+A+E+ +P K + W +++ R+ + E + +L
Sbjct: 619 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV-YANVELGEYAANQLLE 677
Query: 495 LKP---NSVTLVSILSACAR 511
L+ S TL+S + A AR
Sbjct: 678 LESGNDGSYTLLSNIYANAR 697
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 180/376 (47%), Gaps = 50/376 (13%)
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN +I G L L+ M+ + PD T V+ A + + G VH V
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK---DVVSWTTMISCYEGSVLPDK 382
GF +V V N L+ MY G E +VF M + D+VSW ++++ Y +
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 383 AVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A++ ++ M E G PD +++ +VL ACA +G G ++H A+R+GL + + N ++
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 442 DMYSKCKCIDKALEVFHQIPDK-----------------------------------NVI 466
DMY+KC +++A +VF ++ K NV+
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+W+++I G FEAL FR+M L +PN VTLVS+LS CA G L+ GKE H HA
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 526 LRIGVAFDGFLP-------NALLDMYVRCGRMKPAWNQFN---SNERDVSAWNILLTGYA 575
++ + D P NAL+DMY +C K A F+ +R V W +L+ G A
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453
Query: 576 ERGQGALAEEFFRKMI 591
+ G+ A E F +M+
Sbjct: 454 QHGEANEALELFSQML 469
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVSWTTMISCYEGS 377
+H ++ G D + +I MYL+F + + V R+ S V W +I
Sbjct: 48 IHQQLLVQGLPHDPT---HIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 104
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ ++ Y+ M+ G PD T VL AC + + G +H + +G + +
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNV---ISWTSIILGLRLNNRSFEALIFFRKMM-- 492
N L+ MY +C + A +VF ++ ++ V +SW SI+ S A+ F +M
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L ++P++V+LV++L ACA +GA GK++H +ALR G+ D F+ NA++DMY +CG M+
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 284
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
A F + +DV +WN ++TGY++ G+ A F K+ + K
Sbjct: 285 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 259/464 (55%), Gaps = 3/464 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EAL LY++M
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH-RA 137
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV P Y VL +C +G+ +H + G+ +++ V NA+IT+Y++CG A
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF MP RD +++N +ISG+ + G L +F M+ + PD +T+SS+++A +
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G ++H Y+ K G S D + L+ +Y+ G+ E +F+ + +VV W M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ K+ E + M+A G P++ T +L C C +DLG ++H L+++TG
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK ++KA V + +K+V+SWTS+I G + +AL F++M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S +S CA I A+ G +IHA G + D + NAL+++Y RCGR+
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A++ F E +D WN L++G+A+ G A + F +M S
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 277/539 (51%), Gaps = 5/539 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + L +++ C + +G +H+ K + +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA ++++++ G A VF M RD ++N LI G+A+ G + AL +++ M + G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SG 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T +L C + DL++G ++H ++ + G +D + +L+ +YVKCGD+ A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F+ + + + WN M+ + + + K LF M+ + P+ T ++
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG ++H +K GF D+ V LI MY +G E+ +V ++ KDVVSWT+MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+ ++ M+ G PD I +AS +S CA + + G+++H +G
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKM 491
+ I N L+++Y++C I +A F +I K+ I+W ++ G + EAL +F R
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+K N T VS LSA A + + GK+IHA ++ G +F+ + NAL+ +Y +CG +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A +F+ +ER+ +WN ++T ++ G+G A + F +M K N +G+ C
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAAC 658
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 228/441 (51%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E AL+ + MQ + D + +L+ C +G LHS + K +
Sbjct: 223 GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ + + ++ L+ +M G+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGI 341
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +T+PC+LRTC ++ G+++H ++ G+E+D+ V LI MY K G L +AR
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + + ++D +SW +MI+GY ++ L F M++ + PD + L+S IS +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H + G+S DVS+ N L+ +Y G E F +E KD ++W ++S
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L ++A++ + M+ G + T S LSA A L + G ++H ++TG
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE 581
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ N LI +Y KC + A F ++ ++N +SW +II + R EAL F +M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKK 641
Query: 494 N-LKPNSVTLVSILSACARIG 513
+KPN VT + +L+AC+ +G
Sbjct: 642 EGIKPNDVTFIGVLAACSHVG 662
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 216/424 (50%), Gaps = 22/424 (5%)
Query: 191 GGVKPDVYTFPCVLRTCGG-------VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
GG+ P F C LR C G VP E+H + G V N LI +Y
Sbjct: 37 GGLGP--LDFACALRACRGNGRRWQVVP------EIHAKAVTRGLGKYRIVGNLLIDLYS 88
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G ++ AR VF+ + RD +SW AM+SGY +NG + L L+ M V P LSS
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+S+ GR +H K GF ++ V N +I +YL G+ E+VF M +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V++ T+IS + + A+E ++ M+ G PD +TI+S+L+ACA LG+L G +LH
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNN--R 480
+ G+ S I+ +L+D+Y KC ++ AL +F+ NV+ W +++ ++N+ +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
SFE +F + ++PN T IL C + G++IH+ +++ G D ++ L
Sbjct: 329 SFE--LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+DMY + G ++ A E+DV +W ++ GY + A F++M G W
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-QKCGIWPD 445
Query: 600 LMGL 603
+GL
Sbjct: 446 NIGL 449
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 271/506 (53%), Gaps = 7/506 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L+ L+R C + +G +H V + L +++++ HA V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 153 FGKM---CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
F M C+ L WN L+ GY K + EAL L++++ +KPD YT+P VL+ CGG
Sbjct: 61 FDNMENPCEISL--WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGG 118
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ GK +H +++ G D+ V ++L+ MY KC +A +F+ MP++D WN +
Sbjct: 119 LYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTV 178
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
IS Y+++G + + L F +MR +P+ +T+++ IS+ + D G E+H +I GF
Sbjct: 179 ISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D + + L+ MY G+ E +VF +M K VV+W +MIS Y ++ ++
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKR 298
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M EG P T++S++ C+ L G +H +R + S + I ++L+D+Y KC
Sbjct: 299 MYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGK 358
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
++ A +F IP V+SW +I G + FEAL F +M + ++P+++T S+L+A
Sbjct: 359 VELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTA 418
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C+++ AL G+EIH + + + + ALLDMY +CG + A++ F +RD+ +W
Sbjct: 419 CSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSW 478
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
++T Y GQ +A E F +M+ S
Sbjct: 479 TSMITAYGSHGQAYVALELFAEMLQS 504
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 160/506 (31%), Positives = 256/506 (50%), Gaps = 22/506 (4%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++++ C Y G +H+ + KT + + +G++ + M+ K A ++F +M ++
Sbjct: 111 SVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEK 170
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLY--QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D+ WN +I Y ++G F EAL + R F G +P+ T + +C + DL RG
Sbjct: 171 DVACWNTVISCYYQSGNFKEALEYFGLMRRF---GFEPNSVTITTAISSCARLLDLNRGM 227
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
E+H +I G+ D + +AL+ MY KCG L A VF+ MPK+ ++WN+MISGY G
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKG 287
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + + LF M V P TLSS+I G+ VHGY I+ DV + +
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMMEAEGS 395
L+ +Y G E E +F + VVSW MIS Y EG + +A+ + M
Sbjct: 348 SLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF--EALGLFSEMRKSYV 405
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD IT SVL+AC+ L L+ G ++H L + L + ++ L+DMY+KC +D+A
Sbjct: 406 EPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGA 514
VF +P ++++SWTS+I + +++ AL F +M+ N+KP+ VT ++ILSAC G
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGL 525
Query: 515 LMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSNER---DVSA 566
+ G + V G +P + L+D+ R GR+ A+ N DV
Sbjct: 526 VDEG----CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVEL 581
Query: 567 WNILLTGYAERGQGALAEEFFRKMID 592
+ L + L E R +ID
Sbjct: 582 LSTLFSACRLHRNIDLGAEIARTLID 607
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 199/392 (50%), Gaps = 4/392 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ ++AL+Y M+ + + + C + G+ +H + + L +
Sbjct: 185 SGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G L A VF +M + + +WN +I GY G + L++RM+ G
Sbjct: 245 SSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMY-NEG 303
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + T ++ C L GK VH + IR ++DV + ++L+ +Y KCG + A
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAE 363
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELV 311
+F +PK +SWN MISGY G+ + L LF MR+ V+PD +T +SV++A S+L
Sbjct: 364 NIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLA 423
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
EK G E+H +I+ ++ V L+ MY G +E VF + +D+VSWT+MI
Sbjct: 424 ALEK-GEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGL 430
+ Y A+E + M PD +T ++LSAC G +D G +Q+ G+
Sbjct: 483 TAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGI 542
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
I + + LID+ + + +A E+ Q P+
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 245/432 (56%), Gaps = 6/432 (1%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
F WN LI GY+ AG L +Y +M +G V+PD +TFP VL+ C ++++G+EVH
Sbjct: 8 FLWNTLIRGYSIAGV-GGGLEVYNQMVRIG-VRPDDHTFPFVLKACADAFEVRKGREVHG 65
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG-EYM 280
V++ G+E+DV V N L++ Y CG L A VFD MP++D +SWN MI + NG Y
Sbjct: 66 SVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYR 125
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L +F +M + + P+ +T+SS + + K GREVHG I+MG D+ + N LI
Sbjct: 126 DALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLI 185
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ E VF ++++K+VVSW MI+ + + AV + M+ G +P+ +
Sbjct: 186 DMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSV 245
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T +VL ACA +G + G ++H ++ G + ++N L DMY+K + A VF
Sbjct: 246 TFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DT 304
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK 519
++ +S+ +I+G + E+L F +M ++ LK ++V+ + LSACA + A+ GK
Sbjct: 305 SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGK 364
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
EIH LR F+ N+LLD Y +CGR+ A N F+ +DV++WN ++ GY G
Sbjct: 365 EIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLG 424
Query: 579 QGALAEEFFRKM 590
+ A + F M
Sbjct: 425 ELDTAIDLFENM 436
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 238/477 (49%), Gaps = 4/477 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
L+ + M + + D+ +++ C +G +H V K V +GN LS
Sbjct: 25 GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLS 84
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-FDEALSLYQRMFWVGGVKPDV 197
+ G L A VF +M ++DL SWN +IG ++ G+ + +AL ++ R+ G+KP+
Sbjct: 85 FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMF-RLMIDEGLKPNS 143
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T L + K G+EVH IR G E+D+ + N+LI MY K G A VF
Sbjct: 144 ITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYK 203
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ ++ +SWNAMI+ + +N + + L M++ P+ +T ++V+ A +G + G
Sbjct: 204 LDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPG 263
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+E+H I MG + D+ V N L MY G+ + VF +D VS+ +I + +
Sbjct: 264 KEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQT 322
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+++ + M+ G D ++ LSACA L + G ++H +R ++ +A
Sbjct: 323 SDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVA 382
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
N+L+D Y+KC I A +F ++ +K+V SW ++ILG + A+ F M +++
Sbjct: 383 NSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVE 442
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+SV+ +++LSAC+ G L G++ G+ ++D+ R G M+ A
Sbjct: 443 YDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEA 499
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
++L MQ + + D + + + C +G +H + + + H+ + + N+ L
Sbjct: 327 ESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLL 386
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ K G +G A +F +M ++D+ SWN +I GY G D A+ L++ M V+ D
Sbjct: 387 DFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENM-RKDDVEYDS 445
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F VL C L++G++ + G E ++ + + G + A + G
Sbjct: 446 VSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKG 505
Query: 258 MP-KRDRISWNAMI 270
+P D W A++
Sbjct: 506 LPIVPDANIWGALL 519
>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
Length = 730
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 260/500 (52%), Gaps = 12/500 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNAFLSMFVKFG---DLGHAWYVFG 154
+L+R C R +G +H + T L SV LGN + M+ K G L A VF
Sbjct: 2 ASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFD 61
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+M +D+ SW+ +I Y +AG EA++L+QRM V+P+ L C G DL
Sbjct: 62 QMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM----DVEPNEMVIVSTLAACSGAKDLA 117
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G +H ++ V V AL+ MY KCG + +AR VFD MP +D +SW AMI+ +
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFA 177
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ G+ + L M + V P+ +T + I+A GR++H VI +G D++
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ N L+ MY + EE VF RME ++ VSW +MI+ + S A+ + M EG
Sbjct: 238 IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEG 297
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY--IIIANTLIDMYSKCKCIDK 452
PD+++ VLSAC+ G L ++H + S + + N+L+ Y+KC ++
Sbjct: 298 IKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEA 357
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A +F +IP KNV+SWT+++ + +AL + KM+ +++P+SV L++++ A +
Sbjct: 358 AERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSL 417
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNIL 570
+G + +++HA + NAL++MY RCG ++ A F+ ER ++ +WN +
Sbjct: 418 VGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAM 477
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ Y + G A F +M
Sbjct: 478 MGSYVQHGYDEEAIALFSEM 497
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 254/523 (48%), Gaps = 20/523 (3%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
Q +++ +E +V+ + C + G+ +H+ + SV +G A L+M+ K G +
Sbjct: 92 QRMDVEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAI 151
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF +M +D+ SW +I +A+ G +AL + M V+P+ TF +
Sbjct: 152 EQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQ-ARVQPNPVTFVAAITA 210
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C L RG+++H VI G D+ + NAL++MY K A VF M R+R+SW
Sbjct: 211 CSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSW 270
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV-- 324
N+MI+ + + + + LF M + PD ++ V+SA G + + +H +
Sbjct: 271 NSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLEL 330
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+ D+SV N L+ Y G+ E E++F R+ K+VVSWT M++ Y KA+
Sbjct: 331 AAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKAL 390
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
E Y M + PD + + +V+ A + +G++ L KLH + + I I N LI+MY
Sbjct: 391 ELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMY 450
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM----------LN 494
++C +++A VF I KN++SW +++ + EA+ F +M L
Sbjct: 451 ARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLR 510
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRI------GVAFDGFLPNALLDMYVRCG 548
P+ + V +L A A +G L G+ IHA + G + L NAL+ MY RCG
Sbjct: 511 SSPDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCG 570
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
M A F+ RD W+ L+ GYA G A +R M
Sbjct: 571 SMGDASAAFHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDM 613
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 254/536 (47%), Gaps = 37/536 (6%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G QAL+ L+ M + + + V + C + D G +H+ V H + +
Sbjct: 180 GDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQ 239
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K A VF +M DR+ SWN +I +A + A+ L+ M + G+
Sbjct: 240 NALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMN-LEGI 298
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVH--VHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KPD +F VL C L+ K +H + + D+ V N+L+T Y KCGDL A
Sbjct: 299 KPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAA 358
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F +P ++ +SW AM++ Y +G K L L+ M + PD + L +VI A LV
Sbjct: 359 ERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLV 418
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD L R++H V F + + N LI MY G+ EE +VF +E K++VSW M+
Sbjct: 419 GDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMM 478
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSM---------PDEITIASVLSACACLGNLDLGIKLH 422
Y ++A+ + M+ S PD I +L A A LG L G +H
Sbjct: 479 GSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIH 538
Query: 423 ------QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+ G + + + N L+ MY++C + A FH + ++ ++W+S++ G
Sbjct: 539 AELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLVAGYA 598
Query: 477 LNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ + A++ +R M L ++P+SVT VSIL++C+ G L A + + D
Sbjct: 599 HHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLA-----QARHFFVSMVEDHC 653
Query: 536 LP------NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL-----TGYAERG 578
L ++D+ R G + A + + + DV AWN LL G A+RG
Sbjct: 654 LAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDAQRG 709
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 206/401 (51%), Gaps = 13/401 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCG---DLVRARLVF 255
+ +LR CG L G+ VH H++ G + V + N LI MY KCG L AR VF
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MPK+D +SW+ +I+ Y + G + + LF M V+P+ M + S ++A D
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKDLA 117
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG +H ++ V V L+ MY G E+ VF +M KDVVSWT MI+ +
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFA 177
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+A+ET + M P+ +T + ++AC+ LD G K+H + GL I
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
I N L+ MY+K ++AL VF ++ D+N +SW S+I + +S A+ F M L
Sbjct: 238 IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEG 297
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF---DGFLPNALLDMYVRCGRMK 551
+KP+ V+ + +LSAC+ G L K IH+ L + D + N+L+ Y +CG ++
Sbjct: 298 IKPDDVSFLGVLSACSSTGCLRSCKRIHSQ-LELAAVHSPPDLSVENSLVTAYAKCGDLE 356
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F ++V +W +LT Y G G+ A E + KM+
Sbjct: 357 AAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMV 397
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKC---KCIDKALEVFH 458
AS+L C +L G ++H + TG + + + N LI MY KC + A VF
Sbjct: 2 ASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFD 61
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
Q+P K+V+SW+ II EA+ F++M +++PN + +VS L+AC+ L G
Sbjct: 62 QMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM--DVEPNEMVIVSTLAACSGAKDLALG 119
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
IHA L + F+ ALL+MY +CG ++ A F+ +DV +W ++T +A+
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQM 179
Query: 578 GQGALAEEFFRKMIDSK 594
G A E MI ++
Sbjct: 180 GDCRQALETLEGMIQAR 196
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 267/511 (52%), Gaps = 60/511 (11%)
Query: 137 LSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+SM++ F A V ++ +F WN LI GF ++ L LY+RM +G +
Sbjct: 84 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGW-R 142
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD YTFP VL+ CG +P + G VH V G+E +V V N L++MY +CG AR V
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202
Query: 255 FDGMPKR---DRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASEL 310
FD M +R D +SWN++++ Y + G+ ++ + +F M E L + PD ++L +V+ A
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG G++VHGY ++ G +DV V N ++ MY G EE KVF RM+ KDVVSW M
Sbjct: 263 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 322
Query: 371 ISCYEGSVLPDKAVETYQMMEAE-----------------------------------GS 395
++ Y D A+ ++ + E GS
Sbjct: 323 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGS 382
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-------SYIIIANTLIDMYSKCK 448
P+ +T+ S+LS CA G L G + H A++ L +++ N LIDMYSKCK
Sbjct: 383 EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 442
Query: 449 CIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLV 503
A +F IP D++V++WT +I G + + EAL F +M+ + PN+ T+
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDG---FLPNALLDMYVRCGRMKPAWNQF-NS 559
L ACAR+GAL G++IHA+ LR F+ F+ N L+DMY + G + A F N
Sbjct: 503 CALMACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM 560
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++R+ +W L+TGY G+G A + F +M
Sbjct: 561 HQRNGVSWTSLMTGYGMHGRGEEALQIFYEM 591
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 285/609 (46%), Gaps = 70/609 (11%)
Query: 2 TMAFCAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATK 61
++A T Q L Q L + T I S Y F+S A+++ VL + SS
Sbjct: 60 SLASAELTHQQLLVQGLPHDPTHI--ISMYLT-----FNSP-AKALSVLRRLHPSSHTVF 111
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N + G LE L+ MQ L D +++ C + G +H+VV
Sbjct: 112 WWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVV 171
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR---DLFSWNVLIGGYAKAGFFD 178
+ +V +GN +SM+ + G +A VF +M +R DL SWN ++ Y + G
Sbjct: 172 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 231
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A+ +++RM G++PD + VL C V RGK+VH + +R G DV V NA+
Sbjct: 232 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 291
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV---- 294
+ MY KCG + A VF+ M +D +SWNAM++GY + G + L LF +RE +
Sbjct: 292 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 351
Query: 295 -------------------------------DPDFMTLSSVISASELVGDEKLGREVHGY 323
+P+ +TL S++S G G+E H +
Sbjct: 352 VTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCH 411
Query: 324 VIKMGFS-------DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD--VVSWTTMISCY 374
IK + DD+ V N LI MY + + +F + KD VV+WT +I
Sbjct: 412 AIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGN 471
Query: 375 EGSVLPDKAVETY-QMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
++A+E + QM++ + MP+ TI+ L ACA LG L G ++H +R S
Sbjct: 472 AQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFES 531
Query: 433 YII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRK 490
++ +AN LIDMYSK +D A VF + +N +SWTS++ G ++ R EAL IF+
Sbjct: 532 AMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEM 591
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD-GFLPNA-----LLDMY 544
+ L P+ VT V +L AC+ G + G G+ D G +P A ++D+
Sbjct: 592 QKVXLVPDGVTFVVVLYACSHSGMVDQGINYFN-----GMNKDFGVVPGAEHYACMVDLL 646
Query: 545 VRCGRMKPA 553
R GR+ A
Sbjct: 647 SRAGRLDEA 655
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 50/376 (13%)
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN +I G L L+ M+ + PD T V+ A + + G VH V
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK---DVVSWTTMISCYEGSVLPDK 382
GF +V V N L+ MY G E +VF M + D+VSW ++++ Y +
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 383 AVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A++ ++ M E G PD +++ +VL ACA +G G ++H A+R+GL + + N ++
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 442 DMYSKCKCIDKALEVFHQIPDK-----------------------------------NVI 466
DMY+KC +++A +VF ++ K NV+
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+W+++I G FEAL FR+M+L +PN VTLVS+LS CA G L+ GKE H HA
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 526 LRIGVAFDGFLP-------NALLDMYVRCGRMKPAWNQFN---SNERDVSAWNILLTGYA 575
++ + D P NAL+DMY +C K A F+ +R V W +L+ G A
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472
Query: 576 ERGQGALAEEFFRKMI 591
+ G+ A E F +M+
Sbjct: 473 QHGEANEALELFSQML 488
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 235/500 (47%), Gaps = 53/500 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS + G +A+K + M E L I D +LVN++ C + G +H
Sbjct: 218 NSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYAL 277
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ V +GNA + M+ K G + A VF +M +D+ SWN ++ GY++ G FD+AL
Sbjct: 278 RSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALG 337
Query: 183 LYQ----------------------------------RMFWVGGVKPDVYTFPCVLRTCG 208
L++ R + G +P+V T +L C
Sbjct: 338 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCA 397
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVD-------VVNALITMYVKCGDLVRARLVFDGMPKR 261
L GKE H H I++ D + V+NALI MY KC AR +FD +P +
Sbjct: 398 SAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK 457
Query: 262 DR--ISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLG 317
DR ++W +I G ++GE + L LF M + V P+ T+S + A +G + G
Sbjct: 458 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 517
Query: 318 REVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
R++H YV++ F S + V N LI MY G+ + VF M ++ VSWT++++ Y
Sbjct: 518 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 577
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYII 435
++A++ + M+ +PD +T VL AC+ G +D GI + + G++
Sbjct: 578 HGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAE 637
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLN 494
++D+ S+ +D+A+E+ +P K + W +++ R+ + E + +L
Sbjct: 638 HYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV-YANVELGEYAANQLLE 696
Query: 495 LKP---NSVTLVSILSACAR 511
L+ S TL+S + A AR
Sbjct: 697 LESGNDGSYTLLSNIYANAR 716
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 146/283 (51%), Gaps = 11/283 (3%)
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVSWTTMISCYEGS 377
H ++ G D + +I MYL+F + + V R+ S V W +I
Sbjct: 67 THQQLLVQGLPHDPT---HIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 123
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ ++ Y+ M+ G PD T VL AC + + G +H + +G + +
Sbjct: 124 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 183
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNV---ISWTSIILGLRLNNRSFEALIFFRKMM-- 492
N L+ MY +C + A +VF ++ ++ V +SW SI+ S A+ F +M
Sbjct: 184 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 243
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L ++P++V+LV++L ACA +GA GK++H +ALR G+ D F+ NA++DMY +CG M+
Sbjct: 244 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 303
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
A F + +DV +WN ++TGY++ G+ A F K+ + K
Sbjct: 304 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 277/539 (51%), Gaps = 6/539 (1%)
Query: 74 GSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G E+AL ++D ++ +E L +++R C ++G LH V ++ V +
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + + K GB+ A VF ++ ++ +W +I GY K G +L L+ +M
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN- 133
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD Y VL C + L+ GK++H +V+R G E DV VVN LI Y KC + R
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M ++ ISW MISGY +N + + LF M + PD +SV+++ +
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR+VH Y IK + V N LI MY + +KVF M ++V+S+ MI
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+E + M P +T S+L A L L+L ++H L ++ G+
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + LID+YSKC + A VF ++ +K+++ W ++ G + + EAL + +
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ KPN T ++++A + + +L G++ H +++G+ F F+ NAL+DMY +CG ++
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 493
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A FNS+ RDV WN +++ +A+ G+ A FR+M+ + N+ + + C
Sbjct: 494 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 552
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 233/441 (52%), Gaps = 2/441 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ M+E N+ D + +++ C + G +H+ V + + + V + N +
Sbjct: 122 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 181
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ K + +F +M +++ SW +I GY + F EA+ L+ M +G KPD +
Sbjct: 182 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW-KPDGF 240
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VL +CG + L++G++VH + I+ E++ V N LI MY K L A+ VFD M
Sbjct: 241 ACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVM 300
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ IS+NAMI GY + + L LF MR L P +T S++ S + +L +
Sbjct: 301 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 360
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG +IK G S D+ + LI +Y ++ VF M KD+V W M Y +
Sbjct: 361 QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHL 420
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A++ Y ++ P+E T A++++A + L +L G + H ++ GL + N
Sbjct: 421 ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN 480
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L+DMY+KC I++A ++F+ ++V+ W S+I + + EAL FR+MM ++P
Sbjct: 481 ALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 540
Query: 498 NSVTLVSILSACARIGALMCG 518
N VT V++LSAC+ G + G
Sbjct: 541 NYVTFVAVLSACSHAGXVEDG 561
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 10/405 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K M L D A +++ C ++G +H+ K + + N +
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLI 281
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K L A VF M ++++ S+N +I GY+ EAL L+ M V P +
Sbjct: 282 DMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM-RVRLFPPSL 340
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L + L+ K++H +I+ G D+ +ALI +Y KC + AR VF+
Sbjct: 341 LTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 400
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M ++D + WNAM GY ++ E + L L+ ++ P+ T +++I+A+ + + G
Sbjct: 401 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 460
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ H ++KMG V N L+ MY G+ EE K+F+ +DVV W +MIS +
Sbjct: 461 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 520
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI----KLHQLAMRTGLISY 433
++A+ ++ M EG P+ +T +VLSAC+ G ++ G+ + ++ G Y
Sbjct: 521 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHY 580
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + + + + +A E ++P + I W S++ R+
Sbjct: 581 ACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 621
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 42/292 (14%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ALK ++Q +E L+ G H+ + K + NA
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A +F RD+ WN +I +A+ G +EAL +++ M G++P+
Sbjct: 483 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMM-KEGIQPN 541
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G + FG + + ++++ + G L A+ +
Sbjct: 542 YVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 601
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP ++P + S++SA + G+ +L
Sbjct: 602 KMP----------------------------------IEPAAIVWRSLLSACRIAGNVEL 627
Query: 317 GREVHGYVIKMGFSDDVSVCNPLI---KMYLSFGNREEGEKVFSRMESKDVV 365
G+ Y +M S D I ++ S G + +KV RM+S +VV
Sbjct: 628 GK----YAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 675
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 259/464 (55%), Gaps = 3/464 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EAL LY++M
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH-RA 137
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV P Y VL +C +G+ +H + G+ +++ V NA+IT+Y++CG A
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF MP RD +++N +ISG+ + G L +F M+ + PD +T+SS+++A +
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G ++H Y+ K G S D + L+ +Y+ G+ E +F+ + +VV W M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ K+ E + M+A G P++ T +L C C +DLG ++H L+++TG
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK ++KA V + +K+V+SWTS+I G + +AL F++M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S +S CA I A+ G +IHA G + D + NAL+++Y RCGR+
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A++ F E +D WN L++G+A+ G A + F +M S
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 277/539 (51%), Gaps = 5/539 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + L +++ C + +G +H+ K + +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA ++++++ G A VF M RD ++N LI G+A+ G + AL +++ M + G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SG 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T +L C + DL++G ++H ++ + G +D + +L+ +YVKCGD+ A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F+ + + + WN M+ + + + K LF M+ + P+ T ++
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG ++H +K GF D+ V LI MY +G E+ +V ++ KDVVSWT+MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+ ++ M+ G PD I +AS +S CA + + G+++H +G
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKM 491
+ I N L+++Y++C I +A F +I K+ I+W ++ G + EAL +F R
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+K N T VS LSA A + + GK+IHA ++ G +F+ + NAL+ +Y +CG +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A +F+ +ER+ +WN ++T ++ G+G A + F +M K N +G+ C
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAAC 658
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 228/441 (51%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E AL+ + MQ + D + +L+ C +G LHS + K +
Sbjct: 223 GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ + + ++ L+ +M G+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGI 341
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +T+PC+LRTC ++ G+++H ++ G+E+D+ V LI MY K G L +AR
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + + ++D +SW +MI+GY ++ L F M++ + PD + L+S IS +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H + G+S DVS+ N L+ +Y G E F +E KD ++W ++S
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L ++A++ + M+ G + T S LSA A L + G ++H ++TG
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE 581
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ N LI +Y KC + A F ++ ++N +SW +II + R EAL F +M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKK 641
Query: 494 N-LKPNSVTLVSILSACARIG 513
+KPN VT + +L+AC+ +G
Sbjct: 642 EGIKPNDVTFIGVLAACSHVG 662
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 216/424 (50%), Gaps = 22/424 (5%)
Query: 191 GGVKPDVYTFPCVLRTCGG-------VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
GG+ P F C LR C G VP E+H + G V N LI +Y
Sbjct: 37 GGLGP--LDFACALRACRGNGRRWQVVP------EIHAKAVTRGLGKYRIVGNLLIDLYS 88
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G ++ AR VF+ + RD +SW AM+SGY +NG + L L+ M V P LSS
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+S+ GR +H K GF ++ V N +I +YL G+ E+VF M +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V++ T+IS + + A+E ++ M+ G PD +TI+S+L+ACA LG+L G +LH
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNN--R 480
+ G+ S I+ +L+D+Y KC ++ AL +F+ NV+ W +++ ++N+ +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
SFE +F + ++PN T IL C + G++IH+ +++ G D ++ L
Sbjct: 329 SFE--LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+DMY + G ++ A E+DV +W ++ GY + A F++M G W
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-QKCGIWPD 445
Query: 600 LMGL 603
+GL
Sbjct: 446 NIGL 449
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 262/520 (50%), Gaps = 3/520 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL + M D+ +++ C G +H + L V +G
Sbjct: 126 GQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG 185
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + + + G + A Y+F +M +D WNV++ GY K G +D A ++ M
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE-T 244
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF CVL C + G ++H V+ G E D V N L+ MY KCG L AR
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARR 304
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MPK D ++WN MISGY +NG + LF M + PD +T SS +
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGAT 364
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+E+H Y+I+ G S DV + + LI +Y + E K+F + D+V T MIS
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISG 424
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + + A+E ++ + E + +T+ASVL ACA L L LG +LH ++ G
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + ++DMY+KC +D A + F I K+ + W S+I N + EA+ FR+M M
Sbjct: 485 CYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
K + V++ + LSACA + AL GKEIHA +R D F +AL+DMY +CG +
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604
Query: 553 AWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F+ E++ +WN ++ Y G+ + F M+
Sbjct: 605 ACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGML 644
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 266/500 (53%), Gaps = 13/500 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV---KFGDLGHAWYVFG 154
LV++++ C G G H+ + + LG L M+V F D + +Y
Sbjct: 49 LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
C WN +I G+ G FD AL Y +M G + PD YTFP V++ CGG+ +
Sbjct: 109 LWCSE---PWNWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVA 164
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ VH + G+E DV V ++LI Y + G + AR +FD MP +D + WN M++GY
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS--ASELVGDEKLGREVHGYVIKMGFSDD 332
+NG++ +F+ MR +P+ +T + V+S ASE++ + G ++HG V+ G D
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMIN--FGSQLHGLVVSSGLEMD 282
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N L+ MY G+ + ++F M D+V+W MIS Y + D+A + M +
Sbjct: 283 SPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMIS 342
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD IT +S L + L G ++H +R G+ + + + LID+Y KC+ ++
Sbjct: 343 AGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEM 402
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A ++F Q +++ T++I G LN + AL FR ++ ++ NSVTL S+L ACA
Sbjct: 403 AHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAG 462
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNIL 570
+ AL GKE+H H L+ G ++ +A++DMY +CG++ A F + +D WN +
Sbjct: 463 LAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSM 522
Query: 571 LTGYAERGQGALAEEFFRKM 590
+T ++ G+ A + FR+M
Sbjct: 523 ITSCSQNGKPEEAIDLFRQM 542
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 252/516 (48%), Gaps = 13/516 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN NG + A M+ + ++ +C + + G LH +V
Sbjct: 217 NVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVS 276
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N L+M+ K G L A +F M DL +WN +I GY + GF DEA L
Sbjct: 277 SGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCL 336
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+KPD TF L L++GKE+H ++IR G DV + +ALI +Y
Sbjct: 337 FHEMI-SAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D+ A +FD D + AMISGY NG L +F + + + + +TL+S
Sbjct: 396 KCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 455
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + LG+E+HG+++K G V + ++ MY G + + F + KD
Sbjct: 456 VLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKD 515
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W +MI+ + P++A++ ++ M G+ D ++I++ LSACA L L G ++H
Sbjct: 516 AVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHA 575
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
MR S + + LIDMYSKC +D A VF + +KN +SW SII + R +
Sbjct: 576 FMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKD 635
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN---- 538
+L F M+ + ++P+ VT ++I+SAC G + G H R G +
Sbjct: 636 SLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG----IHYFRCMTEELGIMARMEHY 691
Query: 539 -ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++D++ R GR+ A+ NS D W + L
Sbjct: 692 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYL 727
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 193/394 (48%), Gaps = 2/394 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+TC L G++ H ++ G + + L+ MYV CG + A+ +F +
Sbjct: 52 ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN MI G+ G++ L+ + M PD T VI A + LGR VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ MGF DV V + LIK Y G + +F RM SKD V W M++ Y + D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A + M + P+ +T A VLS CA ++ G +LH L + +GL +ANTL+
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MY+KC + A +F +P ++++W +I G N EA F +M+ +KP+S+T
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSIT 351
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
S L + L GKEIH + +R GV+ D FL +AL+D+Y +C ++ A F+
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRT 411
Query: 562 R-DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
D+ +++GY G A E FR ++ +
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ S+L C L G + H + G+ I+ L+ MY C A +F+Q+
Sbjct: 49 LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
W +I G + + AL+F+ KM+ P+ T ++ AC + ++ G+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+H +G D F+ ++L+ Y G + A F+ +D WN++L GY + G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 580 GALAEEFFRKMIDSKGN 596
A F +M ++ N
Sbjct: 229 WDNATGVFMEMRRTETN 245
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 276/540 (51%), Gaps = 6/540 (1%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
G E+AL ++D ++ +E L +++R C ++G LH V ++ V
Sbjct: 106 QGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 165
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G + + + K G++ A VF ++ ++ +W +I GY K G +L L+ +M
Sbjct: 166 VGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETN 225
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V PD Y VL C + L+ GK++H +V+R G E DV VVN LI Y KC +
Sbjct: 226 -VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 284
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD M ++ ISW MISGY +N + + LF M + PD +SV+++
Sbjct: 285 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 344
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR+VH Y IK D V N LI MY + +KVF M ++V+S+ MI
Sbjct: 345 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 404
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y +A+E + M P +T S+L A L L+L ++H L ++ G+
Sbjct: 405 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVS 464
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + LID+YSKC + A VF ++ +K+++ W ++ G + + EAL + +
Sbjct: 465 LDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTL 524
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ KPN T ++++A + + +L G++ H +++G+ F F+ NAL+DMY +CG +
Sbjct: 525 QFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSI 584
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A FNS+ RDV WN +++ +A+ G+ A FR+M+ + N+ + + C
Sbjct: 585 EEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 644
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 250/448 (55%), Gaps = 2/448 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N +++ K + +A VF KM ++L +W+ ++ Y++ G+ +EAL ++ +
Sbjct: 64 LANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKS 123
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ + V+R C + +++G ++H V+R G++ DV V +LI Y K G++ A
Sbjct: 124 GEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA 183
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RLVFD + ++ ++W +I+GY + G L LF MRE V PD +SSV+SA ++
Sbjct: 184 RLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSML 243
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++H YV++ G DVSV N LI Y + G K+F +M K+++SWTTMI
Sbjct: 244 EFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMI 303
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + +A++ + M G PD SVL++C L+ G ++H ++ L
Sbjct: 304 SGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLE 363
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + N LIDMY+K + A +VF + ++NVIS+ ++I G + EAL F +M
Sbjct: 364 SDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 423
Query: 492 MLNLKPNS-VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ L P S +T VS+L A + AL K+IH ++ GV+ D F +AL+D+Y +C +
Sbjct: 424 RVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYV 483
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAER 577
K A + F NE+D+ WN + GY +
Sbjct: 484 KDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 233/441 (52%), Gaps = 2/441 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ M+E N+ D + +++ C + G +H+ V + + + V + N +
Sbjct: 214 SLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLID 273
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ K + +F +M +++ SW +I GY + F EA+ L+ M +G KPD +
Sbjct: 274 FYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW-KPDGF 332
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VL +CG L++G++VH + I+ E+D V N LI MY K L+ A+ VFD M
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 392
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ IS+NAMI GY + + L LF MR L P +T S++ S + +L +
Sbjct: 393 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 452
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG +IK G S D+ + LI +Y ++ VF M KD+V W M Y +
Sbjct: 453 QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHL 512
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A++ Y ++ P+E T A++++A + L +L G + H ++ GL + N
Sbjct: 513 ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN 572
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L+DMY+KC I++A ++F+ ++V+ W S+I + + EAL FR+MM ++P
Sbjct: 573 ALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 632
Query: 498 NSVTLVSILSACARIGALMCG 518
N VT V++LSAC+ G + G
Sbjct: 633 NYVTFVAVLSACSHAGRVEDG 653
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 220/404 (54%), Gaps = 3/404 (0%)
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ ++P F +L+ + K +H +I G ++D + N LI + K +
Sbjct: 20 IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 79
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR+VFD MP ++ I+W++M+S Y + G + LM+F+ + R+ P+ L+SVI A
Sbjct: 80 NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 139
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G + G ++HG+V++ GF DV V LI Y GN EE VF ++ K V+WT
Sbjct: 140 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 199
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T+I+ Y ++E + M +PD ++SVLSAC+ L L+ G ++H +R
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + + N LID Y+KC + ++F Q+ KN+ISWT++I G N+ +EA+ F
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M L KP+ S+L++C AL G+++HA+ ++ + D F+ N L+DMY +
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+ E++V ++N ++ GY+ + + + A E F +M
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 423
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 10/405 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K M L D A +++ C + ++G +H+ K + N +
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K L A VF M ++++ S+N +I GY+ EAL L+ M V P +
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM-RVRLFPPSL 432
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L + L+ K++H +I+FG D+ +ALI +Y KC + AR VF+
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M ++D + WNAM GY ++ E + L L+ ++ P+ T +++I+A+ + + G
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 552
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ H ++KMG V N L+ MY G+ EE K+F+ +DVV W +MIS +
Sbjct: 553 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 612
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK----LHQLAMRTGLISY 433
++A+ ++ M EG P+ +T +VLSAC+ G ++ G+ + ++ G Y
Sbjct: 613 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHY 672
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + + + + +A E ++P + I W S++ R+
Sbjct: 673 ACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 713
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 42/292 (14%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ALK ++Q +E L+ G H+ + K + NA
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A +F RD+ WN +I +A+ G +EAL +++ M G++P+
Sbjct: 575 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMM-KEGIQPN 633
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G + FG + + ++++ + G L A+ +
Sbjct: 634 YVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 693
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP ++P + S++SA + G+ +L
Sbjct: 694 KMP----------------------------------IEPAAIVWRSLLSACRIAGNVEL 719
Query: 317 GREVHGYVIKMGFSDDVSVCNPLI---KMYLSFGNREEGEKVFSRMESKDVV 365
G+ Y +M S D I ++ S G + +KV RM+S +VV
Sbjct: 720 GK----YAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 767
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 257/475 (54%), Gaps = 9/475 (1%)
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ S MSH+ V+ NA ++++ K GDL A VF ++ +D+ SW+ +I Y ++G E
Sbjct: 246 LASGYMSHVPVQ--NALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSE 303
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A+ +Y+ M V+P+ TF V+ C G D+ RG +VH ++ G E DV V +AL+
Sbjct: 304 AIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALV 363
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MYVKCG L A+ FD + KRD + WN M+S Y E G + + + M V+P+ +
Sbjct: 364 QMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMD---VEPNAV 420
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T ++V+ A + D G++VH ++ G D+++ L+ +Y+ + + +VF M
Sbjct: 421 TYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAM 480
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KDV+ W M+ Y +A+ Y M G + +T A+ L AC+ + +++ G
Sbjct: 481 GKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGS 540
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF--HQIPDKNVISWTSIILGLRL 477
K+ + G + ++ L++MY+ C ++ A VF + ++V+ WT++I
Sbjct: 541 KVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQ 600
Query: 478 NNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
R EAL ++ M+ +KPNSVT S+LSAC+ +G ++ G++IH+ D +
Sbjct: 601 AGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAV 660
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N+LL MY RCG ++ AW+ F + RDV +W ++ +A G A A E R+M
Sbjct: 661 QNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREM 715
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 272/527 (51%), Gaps = 15/527 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A + M+ I + ++++ C ++ G +H+ +S + + L
Sbjct: 102 NGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISL 161
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ ++M+ K G A VF M +D+ +WN + G G + L R + G
Sbjct: 162 QTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLL----REMDLQG 217
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ T+ + R G L + + ++ GY + V V NAL+ +Y KCGDL AR
Sbjct: 218 VKPNATTYASITR---GSSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGAR 274
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELV 311
VF+ + ++D ISW+ MIS Y ++G + + + ++ +M E V+P+ +T VI A
Sbjct: 275 KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGC 334
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD G +VHG ++ +G DV+V + L++MY+ G+ E+ +K F R+E +DV+ W M+
Sbjct: 335 GDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFML 394
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y P + +E Y+ M+ E P+ +T +VL AC+ + +L G K+H + +GL
Sbjct: 395 SAYSERGSPQQVIEAYEAMDVE---PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLE 451
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + L+ +Y KC+ + A +VF + K+VI W +++G ++ EAL + +M
Sbjct: 452 TDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARM 511
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
++ N+VT + L AC++I + G ++ A G D ALL+MY CG +
Sbjct: 512 HEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDL 571
Query: 551 KPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ A F S RDV W ++ YA+ G+G A ++ M+ +
Sbjct: 572 EAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEE 618
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 250/463 (53%), Gaps = 13/463 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + KFG+ + VF M ++++SW+++IG YA+ G +EA L++RM G+
Sbjct: 62 NWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME-SEGI 120
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ T VL C +L GK+VH ++ ++ D+ + +L+ MY KCG A+
Sbjct: 121 RPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKA 180
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI-SASELVG 312
VFD M ++D ++WNAM NG+ K L M V P+ T +S+ +S L G
Sbjct: 181 VFDSMARKDIVTWNAMAGASVHNGQSHK---LLREMDLQGVKPNATTYASITRGSSTLTG 237
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
R + ++ G+ V V N L+ +Y G+ E KVF+R+E KDV+SW+TMIS
Sbjct: 238 ----CRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMIS 293
Query: 373 CYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y S +A+E Y++ME+E S+ P+ +T V+ AC G++ GI++H + GL
Sbjct: 294 AYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLE 353
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + + L+ MY KC ++ A + F ++ ++V+ W ++ + + + M
Sbjct: 354 TDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAM 413
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+++PN+VT ++L AC+ + L G+++H+ + G+ D + ALL +Y++C +K
Sbjct: 414 --DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLK 471
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A F + ++DV WN ++ GY + A + +M ++
Sbjct: 472 SACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEA 514
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 243/466 (52%), Gaps = 14/466 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H + V +G+A + M+VK G L A F ++ RD+ WN ++ Y++
Sbjct: 340 GIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSE 399
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + + Y+ M V+P+ T+ VL C + DL +G++VH ++ G E D+
Sbjct: 400 RGSPQQVIEAYEAM----DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMT 455
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ AL+++Y+KC L A VF+ M K+D I WN M+ GY ++ + L L+ M E
Sbjct: 456 METALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAG 515
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+ + +T ++ + A + D + G +V + GF DV L+ MY + G+ E +
Sbjct: 516 VEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAK 575
Query: 354 KVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF R E +DVV WT MI+ Y + ++A+ Y+ M +E P+ +T SVLSAC+
Sbjct: 576 RVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSS 635
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LGN+ G K+H + + N+L+ MY++C + A F +I +++V SWT +
Sbjct: 636 LGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGM 695
Query: 472 ILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIG 529
+ + S AL R+M L + P++VT S+L AC+ G+L G + A+
Sbjct: 696 VAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYA 755
Query: 530 V--AFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILL 571
V + D +L ++D+ R GR+ A QF ER+ W +LL
Sbjct: 756 VEPSKDHYL--CMVDLLARAGRLAEAREVIQFVGLERESMGWMMLL 799
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 203/379 (53%), Gaps = 12/379 (3%)
Query: 218 EVHVHVIRF---GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
E+ V RF GY +V N LI ++ K G+ ++R VFDGM +++ SW+ MI Y
Sbjct: 41 ELDVLYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYA 100
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+NG + +LF M + P+ +T V+ A + G++VH Y+ F D+S
Sbjct: 101 QNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDIS 160
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ L+ MY G+ + + VF M KD+V+W M SV ++ + + M+ +G
Sbjct: 161 LQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAG---ASVHNGQSHKLLREMDLQG 217
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P+ T AS+ + L + Q + +G +S++ + N L+++Y+KC ++ A
Sbjct: 218 VKPNATTYASITRGSSTLTGCR---AMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGAR 274
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARI 512
+VF+++ K+VISW+++I + R EA+ +R M +++PN+VT V ++ AC
Sbjct: 275 KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGC 334
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
G ++ G ++H + +G+ D + +AL+ MYV+CG ++ A F+ E RDV WN +L
Sbjct: 335 GDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFML 394
Query: 572 TGYAERGQGALAEEFFRKM 590
+ Y+ERG E + M
Sbjct: 395 SAYSERGSPQQVIEAYEAM 413
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 10/349 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
GS +Q ++ ++M V+ +A+ N++ C +G +HS + + +
Sbjct: 401 GSPQQVIEAYEAMD-----VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMT 455
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ A LS+++K L A VF M +D+ WN ++ GY EAL LY RM
Sbjct: 456 METALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMH-EA 514
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+ + TF L+ C + D++ G +V + G+E DV AL+ MY CGDL A
Sbjct: 515 GVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAA 574
Query: 252 RLVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ VF +RD + W AMI+ Y + G + L L+ M + P+ +T +SV+SA
Sbjct: 575 KRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACS 634
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G+ GR++H + DV+V N L+ MY G+ + F+++ ++DV SWT
Sbjct: 635 SLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTG 694
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M++ + +A+E + ME G PD +T SVL AC+ G+L+ G
Sbjct: 695 MVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG 743
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 267/489 (54%), Gaps = 4/489 (0%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ + E LH+++ S L + + + + +A ++F K+ LFSWN ++
Sbjct: 25 QSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMM 84
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
Y + G +AL+L+ M G PD +T+P V++ CG + + G +H +FGY
Sbjct: 85 RMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGY 144
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
++D V N L+ MY+ G+ A+LVFD M +R ISWN MI+GYF N + ++
Sbjct: 145 DSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGR 204
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M +V V+PD T+ SV+ A L+ + +LGREVH V + GF ++ V N L+ MY+ G
Sbjct: 205 MMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQ 264
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+E + M+ KDVV+WTT+I+ Y + A+ MM+ EG P+ ++IAS+LSA
Sbjct: 265 MKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSA 324
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C L L+ G LH A+R + S +I+ LI+MY+KC C + + +VF K W
Sbjct: 325 CGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPW 384
Query: 469 TSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+++ G N + EA+ F++M++ +++P+ T S+L A A + L IH + +R
Sbjct: 385 NALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIR 444
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAE 584
G + + + L+D+Y +CG + A FN ++D+ W+ ++ Y + G G +A
Sbjct: 445 SGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAV 504
Query: 585 EFFRKMIDS 593
+ F +M+ S
Sbjct: 505 KLFNQMVQS 513
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 217/458 (47%), Gaps = 10/458 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N N E A+ M ++ + D +V+++ C + + G +H++V +
Sbjct: 183 NTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQE 242
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + NA + M+VK G + AW + M D+D+ +W LI GY G AL L
Sbjct: 243 KGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALML 302
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
M GVKP+ + +L CG + L GK +H IR E++V V ALI MY
Sbjct: 303 CG-MMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYA 361
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + VF G K+ WNA++SG+ +N + + LF M V PD T +S
Sbjct: 362 KCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNS 421
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS--RMES 361
++ A ++ D + +H Y+I+ GF + V + L+ +Y G+ ++F+ ++
Sbjct: 422 LLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKD 481
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++ W+ +I+ Y AV+ + M G P+ +T SVL AC+ G ++ G L
Sbjct: 482 KDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSL 541
Query: 422 HQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
++ +IS++ +ID+ + ++ A + +P N W + +LG + +
Sbjct: 542 FNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGA-LLGACVIH 600
Query: 480 RSFEALIFFRKMMLNLKP----NSVTLVSILSACARIG 513
+ E + L+P N V L + +A R G
Sbjct: 601 ENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWG 638
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 265/518 (51%), Gaps = 5/518 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E L +++R C + G +H + K +V +G A ++++ K G + A VF
Sbjct: 119 NEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVF 178
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ R +WN +I GYA+ G AL L+ RM + GV+PD + + C + L
Sbjct: 179 HALPVRTPVTWNTVITGYAQIGCGGVALELFDRM-GIEGVRPDRFVLASAVSACSALGFL 237
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++H + R E D V+N LI +Y KC L AR +FD M R+ +SW MISGY
Sbjct: 238 EGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGY 297
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+N + + +F M + PD +S++++ + GR++H +VIK D
Sbjct: 298 MQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADE 357
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N LI MY + E VF + D +S+ MI Y + +AV +Q M
Sbjct: 358 YVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFF 417
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P +T S+L + ++L ++H L +++G + A+ LID+YSKC ++ A
Sbjct: 418 SLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDA 477
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
VF+ + K+++ W S+I G N + EA+ F +++L+ + PN T V++++ + +
Sbjct: 478 KTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL 537
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILL 571
++ G++ HA ++ GV D + NAL+DMY +CG +K F S DV WN ++
Sbjct: 538 ASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMI 597
Query: 572 TGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
T YA+ G A + FR M ++ + N+ +G+ C
Sbjct: 598 TTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSAC 635
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 240/464 (51%), Gaps = 2/464 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L + G L A ++F +M R+L SW +I Y + G D A+SL+
Sbjct: 55 LTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKAS 114
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
P+ + VLR C + G++VH ++ +A+V V ALI +Y K G + A
Sbjct: 115 CEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEA 174
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
LVF +P R ++WN +I+GY + G L LF M V PD L+S +SA +
Sbjct: 175 MLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSAL 234
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G + GR++HGY + D SV N LI +Y K+F ME +++VSWTTMI
Sbjct: 235 GFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMI 294
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + +A+ + M G PD S+L++C L + G ++H ++ L
Sbjct: 295 SGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLE 354
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N LIDMY+KC+ + +A VF + + + IS+ ++I G N EA+ F++M
Sbjct: 355 ADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRM 414
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+L+P+ +T VS+L + A+ K+IH ++ G + D + +AL+D+Y +C +
Sbjct: 415 RFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLV 474
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A FN + +D+ WN ++ G+A+ QG A + F +++ S
Sbjct: 475 NDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS 518
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 224/436 (51%), Gaps = 2/436 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL+ D M + D L + V C + G +H ++ + + N +
Sbjct: 205 ALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLID 264
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
++ K L A +F M R+L SW +I GY + F EA++++ M G +PD +
Sbjct: 265 LYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGW-QPDGF 323
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L +CG + + +G+++H HVI+ EAD V NALI MY KC L AR VFD +
Sbjct: 324 ACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDAL 383
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+ D IS+NAMI GY +N + + + +F MR + P +T S++ S +L +
Sbjct: 384 AEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSK 443
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG +IK G S D+ + LI +Y + + VF+ + KD+V W +MI + +
Sbjct: 444 QIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNE 503
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A++ + + G P+E T ++++ + L ++ G + H ++ G+ + ++N
Sbjct: 504 QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSN 563
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
LIDMY+KC I + +F ++VI W S+I + + EAL FR M ++P
Sbjct: 564 ALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP 623
Query: 498 NSVTLVSILSACARIG 513
N VT V +LSACA G
Sbjct: 624 NYVTFVGVLSACAHAG 639
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 204/394 (51%), Gaps = 6/394 (1%)
Query: 203 VLRTC---GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
VL +C GG + +H G D+ + N L+ Y G L AR +FD MP
Sbjct: 21 VLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP 80
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD-PDFMTLSSVISASELVGDEKLGR 318
R+ +SW ++IS Y ++G + LF+ ++ + P+ L+SV+ A LG
Sbjct: 81 HRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGE 140
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VHG +K+ +V V LI +Y G +E VF + + V+W T+I+ Y
Sbjct: 141 QVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIG 200
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
A+E + M EG PD +AS +SAC+ LG L+ G ++H A R+ + + N
Sbjct: 201 CGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVIN 260
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
LID+Y KC + A ++F + +N++SWT++I G N+ + EA+ F M +P
Sbjct: 261 VLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQP 320
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ SIL++C + A+ G++IHAH ++ + D ++ NAL+DMY +C + A F
Sbjct: 321 DGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVF 380
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ E D ++N ++ GY++ A A F++M
Sbjct: 381 DALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRM 414
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 187/372 (50%), Gaps = 13/372 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H+ V K + NA + M+ K L A VF + + D S+N +I GY+
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K EA++++QRM + ++P + TF +L ++ K++H +I+ G D+
Sbjct: 400 KNRDLAEAVNIFQRMRFFS-LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDL 458
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ALI +Y KC + A+ VF+ + +D + WN+MI G+ +N + + + LF +
Sbjct: 459 YAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS 518
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P+ T ++++ + + G++ H ++IK G +D V N LI MY G +EG
Sbjct: 519 GMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG 578
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+F +DV+ W +MI+ Y ++A++ +++M P+ +T VLSACA
Sbjct: 579 RMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHA 638
Query: 413 GNLDLGIKLHQLAMRT------GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
G + G+ H +M++ G+ Y ++++++ + + A E ++P K
Sbjct: 639 GFVGEGLN-HFNSMKSNYDIEPGIEHYA----SVVNLFGRSGKLHAAKEFIERMPIKPAA 693
Query: 467 S-WTSIILGLRL 477
+ W S++ L
Sbjct: 694 AVWRSLLSACHL 705
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 151/315 (47%), Gaps = 11/315 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + N L +A+ M+ ++ V+L+ + + + +H ++ K
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + L + +A + ++ K + A VF + +D+ WN +I G+A+ +EA+ L
Sbjct: 452 SGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKL 511
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ ++ + G+ P+ +TF ++ + + G++ H +I+ G + D V NALI MY
Sbjct: 512 FNQLL-LSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYA 570
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + R++F+ D I WN+MI+ Y ++G + L +F +M E V+P+++T
Sbjct: 571 KCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVG 630
Query: 304 VISA---SELVGD--EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
V+SA + VG+ Y I+ G SV N ++ G ++ R
Sbjct: 631 VLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVN----LFGRSGKLHAAKEFIER 686
Query: 359 MESKDVVS-WTTMIS 372
M K + W +++S
Sbjct: 687 MPIKPAAAVWRSLLS 701
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 21/249 (8%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+A+K + + + +E V LV + G H+ + K + NA
Sbjct: 506 EEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNAL 565
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + +F C D+ WN +I YA+ G +EAL ++ R+ V+P+
Sbjct: 566 IDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVF-RLMGEAEVEPN 624
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLVRARLV 254
TF VL C + G H + ++ Y E ++ +++ ++ + G L A+
Sbjct: 625 YVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEF 683
Query: 255 FDGMPKRDRIS-WNAMIS-----GYFENGEYMKGLMLFIMMREVLVDPD----FMTLSSV 304
+ MP + + W +++S G E G Y + L L DP ++ LS++
Sbjct: 684 IERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMAL-------LADPTDSGPYVLLSNI 736
Query: 305 ISASELVGD 313
++ L D
Sbjct: 737 YASKGLWAD 745
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 269/500 (53%), Gaps = 11/500 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+L + C R + LHS V KT S++ K L A VF +
Sbjct: 7 LVDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
++ WN + Y + ++E L L+ M G PD +T P L+ C G+ L+ GK
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123
Query: 218 EVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+H + +D+ V +AL+ +Y KCG + A VF+ + D + W +M++GY +N
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQN 183
Query: 277 GEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ + L LF +MM V++DP +TL SV+SA + + K G VHG VI+ F D+
Sbjct: 184 NDPEEALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL 241
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ N L+ +Y G + +FS+M KDV+SW+TMI+CY + ++A+ + M +
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P+ +T+ S L ACA NL+ G K+H++A+ G ++ LIDMY KC C D+A
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+++F ++P K+V+SW +++ G N +++++ FR M+ + ++P++V +V IL+A + +
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILL 571
G +H + +R G + F+ +L+++Y +CG + A F RDV W+ ++
Sbjct: 422 GIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMI 481
Query: 572 TGYAERGQGALAEEFFRKMI 591
Y G+G A E F +M+
Sbjct: 482 AAYGIHGRGGEALEIFDQMV 501
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 258/508 (50%), Gaps = 21/508 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL-----VRLCEWKRGYDEGLYLH 118
NS L C E+ L+ L IC +A N ++ C R + G +H
Sbjct: 71 NSTLRSYCREKQWEETLRLF----HLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 119 SVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
K S + +G+A + ++ K G +G A VF + D W ++ GY +
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+EAL+L+ +M + V D T V+ C + ++K G VH VIR ++ D+ +VN+
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ +Y K G A +F MP++D ISW+ MI+ Y N + L LF M E +P+
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+T+ S + A + + + G+++H + GF D SV LI MY+ +E +F
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQ 366
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
R+ KDVVSW ++S Y + + K++ ++ M ++G PD + + +L+A + LG
Sbjct: 367 RLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQ 426
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
+ LH +R+G S + + +LI++YSKC + A+++F + ++V+ W+S+I +
Sbjct: 427 ALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGI 486
Query: 478 NNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCG-----KEIHAHALRIGV 530
+ R EAL F +M+ N ++PN+VT +SILSAC+ G + G + +H + LR
Sbjct: 487 HGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDS 546
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFN 558
G ++D+ R G++ A + N
Sbjct: 547 EHFGI----MVDLLGRIGQLGKAMDIIN 570
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 187/351 (53%), Gaps = 3/351 (0%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
R+ F M+V F + A VF + + F WNV+I G+A G F +L LY +M
Sbjct: 753 RILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM-E 811
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G+KPD + FP L++C G+ DL+RGK +H H++ G D+ V AL+ MY KCGD+
Sbjct: 812 KGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEA 871
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARLVFD M RD +SW +MISGY NG + L F +MR V P+ +++ SV+ A
Sbjct: 872 ARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGN 931
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G + G H YVI+ GF D+ V ++ MY G+ + +F KD+V W+ M
Sbjct: 932 LGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM 991
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y KA++ + M G P +T VLSAC+ G L+ G QL +
Sbjct: 992 IASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFV 1051
Query: 431 ISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
I+ + ++D+ + + +A+++ +P + + W S++ R++N
Sbjct: 1052 IARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHN 1102
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 8/361 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K+ H + +G + D ++ MYV + A +VF+ +P WN MI G+ +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G ++ L L+ M E + PD + + + D + G+ +H +++ G S+D+ V
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+ MY G+ E VF +M +D+VSWT+MIS Y + + + + +M + G +
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P+ ++I SVL AC LG L G H ++TG I++A ++DMYSKC +D A +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
F + K+++ W+++I ++ +A+ F +M+ ++P+ VT +LSAC+ G L
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036
Query: 516 MCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNIL 570
GK ++ I + ++D+ R G++ A + + E D S W L
Sbjct: 1037 EEGKMYFQLMTEEFVIARKLSNY--ACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094
Query: 571 L 571
L
Sbjct: 1095 L 1095
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ H + G D + MY+SF + VF + + W MI +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
++E Y M +G PD+ L +CA L +L G +HQ + G + + +
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
L+DMY+KC I+ A VF ++ ++++SWTS+I G N + E L FF M + +
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN V+++S+L AC +GAL G+ H++ ++ G FD + A++DMY +CG + A
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F+ +D+ W+ ++ Y G G A + F +M+ +
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKA 1014
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 24/314 (7%)
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
R+VLVD F ++ S S+L H V K G D L +Y +
Sbjct: 4 RQVLVDL-FQACNNGRSVSQL----------HSQVFKTGILHDTFFATKLNSLYAKCASL 52
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSA 408
+ KVF +V W + + Y ++ + + +M G PD TI L A
Sbjct: 53 QAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKA 112
Query: 409 CACLGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
CA L L+LG +H A + I S + + + L+++YSKC + +AL+VF + + +
Sbjct: 113 CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVL 172
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN----LKPNSVTLVSILSACARIGALMCGKEIHA 523
WTS++ G + NN EAL F +M++ L P VTLVS++SACA++ + G +H
Sbjct: 173 WTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHG 230
Query: 524 HALRIGVAFDGFLP--NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
+R FDG LP N+LL++Y + G K A N F+ E+DV +W+ ++ YA
Sbjct: 231 LVIR--REFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAA 288
Query: 581 ALAEEFFRKMIDSK 594
A F +MI+ +
Sbjct: 289 NEALNLFHEMIEKR 302
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 227/544 (41%), Gaps = 39/544 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +++ +M I D A+V ++ + + L LH V ++ + +V +
Sbjct: 386 NGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFV 445
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + ++ K G LG A +F M RD+ W+ +I Y G EAL ++ +M
Sbjct: 446 GASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNST 505
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
V+P+ TF +L C ++ G ++ ++ + D + ++ + + G L +A
Sbjct: 506 VRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKA 565
Query: 252 RLVFDGMP-KRDRISWNAM-----ISGYFENGEYMKGLML---------FIMMREVL-VD 295
+ + MP W A+ I E GE + +I++ + VD
Sbjct: 566 MDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVD 625
Query: 296 PDFMTLSSVISASELVGDEKL-GR---EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ ++ + + + G +K+ G+ EV G V SD + I L +
Sbjct: 626 GKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQM 685
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
G++V+ + D + T G+VL + +Q ++A S I A +C
Sbjct: 686 GKEVY--IPDLDFLLHDT------GAVL-----QFWQRIKATESKYKTIGSAPGTDTISC 732
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L K H GL I MY ID A VF IP+ W +
Sbjct: 733 FSCLK---KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVM 789
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I G + R +L + KMM LKP+ L +CA + L GK IH H + G
Sbjct: 790 IRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC 849
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRK 589
+ D F+ AL+DMY +CG ++ A F+ RD+ +W +++GYA G + FF
Sbjct: 850 SNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 590 MIDS 593
M S
Sbjct: 910 MRSS 913
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L + D M+ + + ++++++ C +G + HS V +T + +
Sbjct: 897 NGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILV 956
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G L A +F + +DL W+ +I Y G +A+ L+ +M G
Sbjct: 957 ATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMV-KAG 1015
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGK-EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+P TF CVL C L+ GK + F + ++ + + G L A
Sbjct: 1016 VRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEA 1075
Query: 252 RLVFDGMP-KRDRISWNAMISG 272
+ + MP + D W +++
Sbjct: 1076 VDLIENMPVEPDASIWGSLLGA 1097
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 277/522 (53%), Gaps = 14/522 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QAL+ M+E I D+ + +LV C + +EG LH + T + L A L
Sbjct: 13 QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A VF M +DLF+W+ +I YA+AG + A+ LY+RM GV+P+V
Sbjct: 73 QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMI-AEGVEPNV 131
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF C L C V L G+ +H ++ D + ++L+ MY+KC ++V AR VF+G
Sbjct: 132 VTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 191
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKL 316
M R+ S+ AMIS Y + GE+ + L LF M +V ++P+ T ++++ A E +G+ +
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR+VH ++ GF +V V N L+ MY G+ E KVF M +++V+SWT+MI+ Y
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P +A+ ++ M+ E P ++ +S L+ACA LG LD G ++H + L S +
Sbjct: 312 HGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEANLAS-PQM 367
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
+L+ MY++C +D A VF+++ ++ S ++I + R +AL +RKM
Sbjct: 368 ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGI 427
Query: 497 P-NSVTLVSILSACARIGALM-CGKEIHAHALRIGVA--FDGFLPNALLDMYVRCGRMKP 552
P + +T VS+L AC+ + C + + + GV + +L ++D+ R GR+
Sbjct: 428 PADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYL--CMVDVLGRSGRLGD 485
Query: 553 AWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A + + D AW LL+G G E RK+ +
Sbjct: 486 AEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFE 527
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 172/325 (52%), Gaps = 3/325 (0%)
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MI+ G ++ L L+ M E + D ++S+++A + + GR +H ++I G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F D+ + L++MY G+ ++ ++VF ME KD+ +W+++I+ Y + + AV Y+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M AEG P+ +T A L CA + L G +HQ + + + ++ ++L++MY KC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSIL 506
+ +A +VF + +NV S+T++I EAL F +M + ++PN+ T +IL
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
A +G L G+++H H G + + NAL+ MY +CG A F+S R+V
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+W ++ YA+ G A F++M
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM 325
>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 731
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 296/586 (50%), Gaps = 52/586 (8%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCE 106
+ L+ SS N N RL L +G ALK + D + + + D+ ++ +
Sbjct: 3 KALSAIGESSTTLLNLNRRLTALTRSGENRNALKLFADVHRCITLRPDQYSVSLAITAAG 62
Query: 107 WKR-----------GYDEGLYLHSVVSKTMSHLSVRLGN--------------------A 135
R GL HS VS T+ L RLGN
Sbjct: 63 HLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTT 122
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRD-LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
LS K GD+ +A+ VF KM +RD + WN +I G ++G+ ++ L++ M +G V+
Sbjct: 123 LLSASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFREMHKLG-VR 181
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D + F VL C L GK+VH VI+ G+ VVNALITMY C +V ARLV
Sbjct: 182 HDKFGFATVLSMCY-YGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLV 240
Query: 255 FD--GMPKRDRISWNAMISGY--FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
F+ + RD++++N +I G F+ E L++F M E + P +T SV+S+
Sbjct: 241 FEEADVAVRDQVTFNVVIDGLAGFKREE---SLLVFRQMVEAGLRPTDLTFVSVMSSCSC 297
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
E +G +VHG IK G+ + V N + MY SF + KVF +E KD+++W TM
Sbjct: 298 ---ETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTM 354
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + L A+ Y+ M G PDE T S+L++ L L++ + ++ GL
Sbjct: 355 ISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDLDALEM---VQACVIKFGL 411
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I I+N LI YSK I KA +F P KN+ISW +II G N SFE L F
Sbjct: 412 SSKIEISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSC 471
Query: 491 MM---LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
++ + + P++ TL +LS C I +LM G++ HA+ALR G + + NA ++MY +C
Sbjct: 472 LLEAEVLIIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQC 531
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G ++ + F+ +++D +WN L++ YA G+G A ++ M D
Sbjct: 532 GTLQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQD 577
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 257/533 (48%), Gaps = 28/533 (5%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+++ M +L + D+ ++ +C + D G +HS+V K ++ + NA ++
Sbjct: 168 SIELFREMHKLGVRHDKFGFATVLSMCYYG-SLDFGKQVHSLVIKAGFFVASSVVNALIT 226
Query: 139 MFVKFGDLGHAWYVF--GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
M+ + A VF + RD ++NV+I G A GF E L R G++P
Sbjct: 227 MYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDGLA--GFKREESLLVFRQMVEAGLRPT 284
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF V+ +C G +VH I+ GYE V N+ +TMY D A VF+
Sbjct: 285 DLTFVSVMSSCSCET---MGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFE 341
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ ++D I+WN MISGY + L+L+ M + V PD T S++++S D
Sbjct: 342 SLEEKDLITWNTMISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSL---DLDA 398
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
V VIK G S + + N LI Y G + + +F K+++SW +IS +
Sbjct: 399 LEMVQACVIKFGLSSKIEISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYH 458
Query: 377 SVLPDKAVETYQ-MMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ + +E + ++EAE +PD T++ +LS C + +L LG + H A+R G
Sbjct: 459 NGFSFEGLERFSCLLEAEVLIIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKET 518
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+I N I+MYS+C + K+L VFHQ+ DK+ +SW S+I + + A++ ++ M
Sbjct: 519 LIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDE 578
Query: 495 LK--PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRC 547
K P++ TL ++LSAC G + G EI V F G +PN L+D+ R
Sbjct: 579 GKVDPDAATLSAVLSACGHAGLVKEGLEI----FNSMVEFHGLIPNVDHFSCLVDLLGRA 634
Query: 548 GRMKPAWNQFNSNERDVSA----WNILLTGYAERGQGALAEEFFRKMIDSKGN 596
G + A + +E+ + + W L + A G L + R +++ + N
Sbjct: 635 GHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVARLLMEKEKN 687
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 245/429 (57%), Gaps = 3/429 (0%)
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
++GG+AK G + ++ + G +PD YT P V+R C + +L+ G+ +H V +F
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGA-RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G + D V AL+ MYVKC ++ AR +FD M +RD ++W MI GY E G+ + L+LF
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MRE V PD + + +V+ A +G R + Y+ + F DV + +I MY
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E ++F RME K+V+SW+ MI+ Y KA++ ++MM + G +PD+IT+AS+L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC+ L NL +G +H + + GL + L+DMY KC+ I+ A +F ++P+++++
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+WT +I G + E+L+ F KM + P+ V +V+++ ACA++GA+ + I +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
R D L A++DM+ +CG ++ A F+ E++V +W+ ++ Y GQG A
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 419
Query: 585 EFFRKMIDS 593
+ F M+ S
Sbjct: 420 DLFPMMLRS 428
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 260/500 (52%), Gaps = 13/500 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L ++R C + G +H +V K L + A + M+VK ++ A ++F
Sbjct: 29 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 88
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
KM +RDL +W V+IGGYA+ G +E+L L+++M GV PD V+ C + +
Sbjct: 89 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAM 147
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ + + ++ R ++ DV + A+I MY KCG + AR +FD M +++ ISW+AMI+ Y
Sbjct: 148 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 207
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+G+ K L LF MM + PD +TL+S++ A + + ++GR +H V K G D
Sbjct: 208 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDH 267
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
VC L+ MY E+ +F +M +D+V+WT MI Y ++++ + M E
Sbjct: 268 FVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREE 327
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G +PD++ + +V+ ACA LG + + R +I+ +IDM++KC C++ A
Sbjct: 328 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 387
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
E+F ++ +KNVISW+++I + + +AL F M+ + + PN +TLVS+L AC+
Sbjct: 388 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 447
Query: 513 GALMCGKEIHA-----HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVS 565
G + G + +++R V ++D+ R GR+ A S E+D
Sbjct: 448 GLVEEGLRFFSLMWEDYSVRADVKH----YTCVVDLLGRAGRLDEALKLIESMTVEKDEG 503
Query: 566 AWNILLTGYAERGQGALAEE 585
W L LAE+
Sbjct: 504 LWGAFLGACRTHKDVVLAEK 523
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +AL M + D+ L +L+ C + G +H +V K L +
Sbjct: 210 HGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFV 269
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K ++ A ++F KM +RDL +W V+IGGYA+ G +E+L L+ +M G
Sbjct: 270 CAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM-REEG 328
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD V+ C + + + + + ++ R ++ DV + A+I M+ KCG + AR
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 388
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M +++ ISW+AMI+ Y +G+ K L LF MM + P+ +TL S++ A G
Sbjct: 389 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 448
>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 251/464 (54%), Gaps = 14/464 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
LS K G + +A +F M ++ WN +I G A++G A++ + M +G V
Sbjct: 130 TTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMG-V 188
Query: 194 KPDVYTFPCVLRTCGG-VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KPD Y+F C+L C + DL G++VH VI+ GY VVNALITMY +L A
Sbjct: 189 KPDNYSFACILSLCTKEIEDL--GRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAY 246
Query: 253 LVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF+G RD+I++N MI G + L++F M+ + P +T S++S+ +
Sbjct: 247 EVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSI 306
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ ++ ++VH IK+GF V N I MY S G + VF + KD++SW +
Sbjct: 307 I---QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAI 363
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y AV + M+ G PDE T S+L + +++ +H + GL
Sbjct: 364 ISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEM---VHAYVYKNGL 420
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I I I N L+ Y+KC+ + ++L+VF +I KN+ISW ++I G LN +AL F K
Sbjct: 421 ILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSK 480
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++++ LKP++ TL +LS CA I L GK+IH + LR G + + L N L+ MY +CG
Sbjct: 481 LIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGL 540
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ + FN ERD+ +WN +++ YA+ GQG A + F+ M D
Sbjct: 541 LGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQD 584
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 230/451 (50%), Gaps = 17/451 (3%)
Query: 72 LNGSLEQALKYLD-----SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
+ GS E L ++ M ++ + D + ++ LC K D G +HS V K
Sbjct: 164 ITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILSLCT-KEIEDLGRQVHSSVIKAGY 222
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVF-GKMCD-RDLFSWNVLIGGYAKAGFFDEALSLY 184
+ NA ++M+ +L A+ VF G + RD ++NV+I G +EAL ++
Sbjct: 223 LRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMF 282
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
+ M + P TF ++ +C + + ++VH I+ G+E+ V N+ ITMY
Sbjct: 283 KDM-KRACLSPTELTFVSIMSSCSII---QVAQQVHSQAIKLGFESFTLVGNSTITMYTS 338
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CG+ A VF + ++D ISWNA+IS Y + ++ F+ M+ + PD T S+
Sbjct: 339 CGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSL 398
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ SE + ++ VH YV K G + + N L+ Y ++ +VFS + SK++
Sbjct: 399 LGVSEFI---EIVEMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNI 455
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SW T+I + + LP +A+E + + P T++ VLS CA + LD+G ++H
Sbjct: 456 ISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGY 515
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+R+G S + N LI MYSKC + +L F+ + +++++SW SII + + EA
Sbjct: 516 ILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEA 575
Query: 485 LIFFRKM--MLNLKPNSVTLVSILSACARIG 513
+ F+ M M ++ P+ T +ILSAC+ G
Sbjct: 576 VDCFKAMQDMPSIMPDQATFTTILSACSHAG 606
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 224/476 (47%), Gaps = 48/476 (10%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMF--WVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+DL +N L+ ++ + ++L L+ ++ +KPD Y L C D+
Sbjct: 19 SQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDIAF 78
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR------------------------- 250
G ++H + IR G + V N ++++Y K D V
Sbjct: 79 GSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTK 138
Query: 251 ------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
A +FD MPK + WNAMI+G E+G + F M ++ V PD + + +
Sbjct: 139 MGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACI 198
Query: 305 IS--ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
+S E+ E LGR+VH VIK G+ SV N LI MY S N E+ +VF ES
Sbjct: 199 LSLCTKEI---EDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESE 255
Query: 362 -KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D +++ MI ++A+ ++ M+ P E+T S++S+C+ + + +
Sbjct: 256 VRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSI---IQVAQQ 312
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A++ G S+ ++ N+ I MY+ C A VF + +K++ISW +II N
Sbjct: 313 VHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNF 372
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
A++ F +M + P+ T S+L I + + +HA+ + G+ + NA
Sbjct: 373 GKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIV---EMVHAYVYKNGLILIIEILNA 429
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
L+ Y +C ++K + F+ N +++ +WN ++ G+ G A E F K+I SK
Sbjct: 430 LVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSK 485
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 193/388 (49%), Gaps = 19/388 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL M+ + E V+++ C + + +HS K +GN+
Sbjct: 276 EEALIMFKDMKRACLSPTELTFVSIMSSCSIIQVAQQ---VHSQAIKLGFESFTLVGNST 332
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ G+ A VF + ++DL SWN +I Y + F A+ + +M G+ PD
Sbjct: 333 ITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQM-QRTGIGPD 391
Query: 197 VYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+TF +L GV + E VH +V + G ++++NAL++ Y KC + ++ VF
Sbjct: 392 EFTFGSLL----GVSEFIEIVEMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVF 447
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ ++ ISWN +I G+ NG ++ L F + + P TLS V+S +
Sbjct: 448 SEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLD 507
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+++HGY+++ G S + S+CN LI MY G + F+ M +D+VSW ++IS Y
Sbjct: 508 IGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYA 567
Query: 376 GSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+AV+ ++ M+ S MPD+ T ++LSAC+ G ++ ++ + LI Y
Sbjct: 568 QHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQI----LDIMLIDYR 623
Query: 435 IIANT-----LIDMYSKCKCIDKALEVF 457
+ + ++D+ + ID+A V
Sbjct: 624 AVPSVDQLSCIVDLIGRSGYIDQAESVI 651
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 258/504 (51%), Gaps = 17/504 (3%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNAFLSMFVKFG---DLGHAWYVFGK 155
+L+R C R +G +H + T L SV LGN + M+ K G L A VF +
Sbjct: 3 SLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQ 62
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M +D+ SW+ +I Y +AG EA++L+QRM V+P+ L C G DL
Sbjct: 63 MPKKDVVSWSCIIAAYGQAGHCREAINLFQRM----DVEPNEMVIVSTLAACSGAKDLAL 118
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H ++ V V AL+ MY KCG + +AR VFD +P +D +SW AMI+ + +
Sbjct: 119 GMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQ 178
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G+ + L M + V P+ +T + I+A GR++H VI +G D+++
Sbjct: 179 MGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITI 238
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ MY + EE VF RME ++ VSW +MI+ + S A+ + M EG
Sbjct: 239 QNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGI 298
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY--IIIANTLIDMYSKCKCIDKA 453
PD+++ VLSAC+ L ++H + S + + N+L+ Y+KC ++ A
Sbjct: 299 KPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAA 358
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
+F +IP KNV+SWT+++ + +AL + KM+ +++P+SV L++++ A + +
Sbjct: 359 ERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLV 418
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE------RDVSA 566
G + +++HA + NAL++MY RCG ++ A F+ E RD
Sbjct: 419 GDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVT 478
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
W+ L+ GYA G A +R M
Sbjct: 479 WSSLVAGYAHHGHAEYAILLYRDM 502
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 253/513 (49%), Gaps = 27/513 (5%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
Q +++ +E +V+ + C + G+ +H+ + SV +G A L+M+ K G +
Sbjct: 92 QRMDVEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAI 151
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF ++ +D+ SW +I +A+ G +AL + M V+P+ TF +
Sbjct: 152 EQARAVFDQIPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQ-ARVQPNPVTFVAAITA 210
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C L RG+++H VI G D+ + NAL++MY K A VF M R+R+SW
Sbjct: 211 CSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSW 270
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV-- 324
N+MI+ + + + + LF M + PD ++ V+SA + + +H +
Sbjct: 271 NSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLEL 330
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+ D+SV N L+ Y G+ E E++F R+ K+VVSWT M++ Y KA+
Sbjct: 331 AAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKAL 390
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
E Y M + PD + + +V+ A + +G++ L KLH + + I I N LI+MY
Sbjct: 391 ELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMY 450
Query: 445 SKCKCIDKALEVFHQIPDKNVI-----SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
++C +++A VF I KN++ +W+S++ G + + A++ +R M L ++P+
Sbjct: 451 TRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPD 510
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP------NALLDMYVRCGRMKP 552
SVT VSIL++C+ G L A + + D L ++D+ R G +
Sbjct: 511 SVTYVSILNSCSHAGLLA-----QARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGR 565
Query: 553 AWNQFNSN--ERDVSAWNILL-----TGYAERG 578
A + + + DV AWN LL G A RG
Sbjct: 566 AEDVVRNMPFQPDVVAWNTLLGCCKVHGDARRG 598
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 205/401 (51%), Gaps = 13/401 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCG---DLVRARLVF 255
+ +LR CG L G+ VH H++ G + V + N LI MY KCG L AR VF
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MPK+D +SW+ +I+ Y + G + + LF M V+P+ M + S ++A D
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKDLA 117
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG +H ++ V V L+ MY G E+ VF ++ KDVVSWT MI+ +
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFA 177
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+A+ET + M P+ +T + ++AC+ LD G K+H + GL I
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I N L+ MY+K ++AL VF ++ D+N +SW S+I + +S A+ F M L
Sbjct: 238 IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEG 297
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF---DGFLPNALLDMYVRCGRMK 551
+KP+ V+ + +LSAC+ L K IH+ L + D + N+L+ Y +CG ++
Sbjct: 298 IKPDDVSFLGVLSACSSTRCLRSCKRIHSQ-LELAAVHSPPDLSVENSLVTAYAKCGDLE 356
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F ++V +W +LT Y G G+ A E + KM+
Sbjct: 357 AAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMV 397
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 10/408 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G QAL+ L+ M + + + V + C + D G +H+ V H + +
Sbjct: 180 GDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQ 239
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K A VF +M DR+ SWN +I +A + A+ L+ M + G+
Sbjct: 240 NALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMN-LEGI 298
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVH--VHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KPD +F VL C L+ K +H + + D+ V N+L+T Y KCGDL A
Sbjct: 299 KPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAA 358
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F +P ++ +SW AM++ Y +G K L L+ M + PD + L +VI A LV
Sbjct: 359 ERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLV 418
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-----DVVS 366
GD L R++H V F + + N LI MY G+ EE +VF +E K D V+
Sbjct: 419 GDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVT 478
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLA 425
W+++++ Y + A+ Y+ M EG PD +T S+L++C+ G L +
Sbjct: 479 WSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVSMV 538
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
L ++ ++D+ + + +A +V +P +V++W +++
Sbjct: 539 EDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLL 586
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 24/326 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + + A+ M I D+ + + ++ C R +HS +
Sbjct: 271 NSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLEL 330
Query: 124 TMSH----LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
H LSV N+ ++ + K GDL A +F ++ +++ SW ++ Y G +
Sbjct: 331 AAVHSPPDLSVE--NSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSK 388
Query: 180 ALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
AL LY +M VG ++PD V+ V D+ +++H V + + + NAL
Sbjct: 389 ALELYDKM--VGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNAL 446
Query: 239 ITMYVKCGDLVRARLVFDGMPK-----RDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
I MY +CG L AR VFDG+ + RD ++W+++++GY +G ++L+ M
Sbjct: 447 INMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEG 506
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP-----LIKMYLSFGN 348
V PD +T S++++ G L + + + M D P ++ + G
Sbjct: 507 VQPDSVTYVSILNSCSHAG---LLAQARHFFVSM-VEDHCLAAWPDHWKCMVDVLGRAGF 562
Query: 349 REEGEKVFSRME-SKDVVSWTTMISC 373
E V M DVV+W T++ C
Sbjct: 563 VGRAEDVVRNMPFQPDVVAWNTLLGC 588
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKC---KCIDKALEVFH 458
AS+L C +L G ++H + TG + + + N LI MY KC + A VF
Sbjct: 2 ASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFD 61
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
Q+P K+V+SW+ II EA+ F++M +++PN + +VS L+AC+ L G
Sbjct: 62 QMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM--DVEPNEMVIVSTLAACSGAKDLALG 119
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
IHA L + F+ ALL+MY +CG ++ A F+ +DV +W ++T +A+
Sbjct: 120 MAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQM 179
Query: 578 GQGALAEEFFRKMIDSK 594
G A E MI ++
Sbjct: 180 GDCRQALETLEGMIQAR 196
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 256/464 (55%), Gaps = 3/464 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EAL LY++M
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMH-RA 137
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV P Y VL +C +G+ VH + G+ ++ V NALIT+Y++CG A
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLA 197
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF MP RD +++N +ISG+ + L +F M+ + PD +T+SS+++A +
Sbjct: 198 ERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASL 257
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G ++H Y+ K G S D + L+ +Y+ G+ E +F+ +VV W ++
Sbjct: 258 GDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLIL 317
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ K+ E + M+ G P++ T +L C C G +DLG ++H L+++TG
Sbjct: 318 VAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFE 377
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK ++KA V + +K+V+SWTS+I G + +AL F++M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEM 437
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S +S CA I A+ G +IHA G + D + NAL+++Y RCGR+
Sbjct: 438 QKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRI 497
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A++ F E +D WN L++G+A+ G A + F +M S
Sbjct: 498 REAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 270/520 (51%), Gaps = 3/520 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + L +++ C + +G +H+ K +
Sbjct: 121 NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA ++++++ G A VF M RD ++N LI G+A+ + AL +++ M G
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEM-QSSG 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T +L C + DL++G ++H ++ + G +D + +L+ +YVKCGD+ A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL 299
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F+ + + + WN ++ + + + K LF M+ + P+ T ++ G
Sbjct: 300 VIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG ++H +K GF D+ V LI MY +G E+ +V ++ KDVVSWT+MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+ ++ M+ G PD I +AS +S CA + + G+++H +G
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSG 479
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKM 491
+ I N L+++Y++C I +A F +I K+ I+W ++ G + EAL +F R
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+K N T VS LSA A + + GK+IHA ++ G +F+ + NAL+ +Y +CG +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A +F+ +ER+ +WN ++T ++ G+G A +FF +M
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQM 639
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 230/451 (50%), Gaps = 28/451 (6%)
Query: 170 GYAKAGFFDE-----ALSLY-QRMFWVGGVKPDVYTFPCVLRTCGG-------VPDLKRG 216
G++ AGF + LSL+ + GG+ P F C LR C G VP
Sbjct: 10 GWSLAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVP----- 62
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
E+H I G D V N LI +Y K G ++ AR VF+ + RD +SW AM+SGY +N
Sbjct: 63 -EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQN 121
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + L L+ M V P LSSV+S+ GR VH K GF + V
Sbjct: 122 GLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG 181
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI +YL G+ E+VF M +D V++ T+IS + + A+E ++ M++ G
Sbjct: 182 NALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLS 241
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +TI+S+L+ACA LG+L G +LH + G+ S I+ +L+D+Y KC ++ AL +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 457 FHQIPDKNVISWTSIILGL-RLNN--RSFEALIFFRKMMLNLKPNSVTLVSILSACARIG 513
F+ NV+ W I++ ++N+ +SFE +F + ++PN T IL C G
Sbjct: 302 FNLGNRTNVVLWNLILVAFGQINDLAKSFE--LFCQMQTAGIRPNQFTYPCILRTCTCTG 359
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+ G++IH+ +++ G D ++ L+DMY + G ++ A E+DV +W ++
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 573 GYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
GY + A F++M G W +GL
Sbjct: 420 GYVQHEYCKDALAAFKEM-QKCGIWPDNIGL 449
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 219/422 (51%), Gaps = 5/422 (1%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C +G E AL+ + MQ + D + +L+ C +G LHS + K
Sbjct: 222 CAHG--EHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDY 279
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ + L ++VK GD+ A +F ++ WN+++ + + ++ L+ +M
Sbjct: 280 IMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQM-QT 338
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G++P+ +T+PC+LRTC ++ G+++H ++ G+E+D+ V LI MY K G L +
Sbjct: 339 AGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISASE 309
AR V + + ++D +SW +MI+GY ++ EY K L F M++ + PD + L+S IS
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAGYVQH-EYCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G ++H V G+S DVS+ N L+ +Y G E F +E KD ++W
Sbjct: 458 GIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++S + S L ++A++ + M+ G + T S LSA A L + G ++H ++TG
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ N LI +Y KC + A F ++ ++N +SW +II + R EAL FF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFD 637
Query: 490 KM 491
+M
Sbjct: 638 QM 639
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 1/215 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+ AL MQ+ I D L + + C + +GL +H+ V + V + NA
Sbjct: 428 KDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNAL 487
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++++ + G + A+ F ++ +D +WN L+ G+A++G +EAL ++ RM GVK +
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD-QSGVKHN 546
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
V+TF L + ++K+GK++H VI+ G+ + +V NALI++Y KCG A++ F
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
M +R+ +SWN +I+ ++G ++ L F M++
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK 641
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 147/360 (40%), Gaps = 54/360 (15%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQE----LNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
N ++ +G E+ALK M + N+ AL L E K+G +H+
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ----IHA 571
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG---- 175
V KT +GNA +S++ K G A F +M +R+ SWN +I ++ G
Sbjct: 572 RVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLE 631
Query: 176 ---FFD----EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
FFD E LS ++ M G++P + CV+ G L R K+ V
Sbjct: 632 ALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKF---VEEMPI 688
Query: 229 EADVDVVNALITM-----YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
AD V L++ ++ G+L L+ + D S+ + + Y G++
Sbjct: 689 AADAMVWRTLLSACKVHKNIEVGELAAKHLL--ELEPHDSASYVLLSNAYAVTGKWANRD 746
Query: 284 MLFIMMRE--VLVDP--DFMTLSSVISASELVGD--EKLGREVHGY-------VIKMGFS 330
+ MMR+ V +P ++ + +V+ A VGD L +++ + V K+G+
Sbjct: 747 QVRKMMRDRGVRKEPGRSWIEVKNVVHAF-FVGDRLHPLAEQIYNFLAVINDRVAKVGYK 805
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS---CYEGSVLPDKAVETY 387
+ K +L +EG + S+ + ++S C V+ + VE Y
Sbjct: 806 QE--------KYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRVEKY 857
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 281/521 (53%), Gaps = 9/521 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEW-KRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
Q L M N+ DE +++R C K + +H+ + S + N
Sbjct: 94 QVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPL 153
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ ++ K G + A VF ++ +D SW +I G ++ G DEA+ L+ +M V P
Sbjct: 154 IDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMH-KSAVIPT 212
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
Y F VL C + K G+++H ++++G ++ V NAL+T+Y + G+L+ A +F
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +RDRIS+N++ISG + G + L LF M+ + PD +T++S++SA VG
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+++H YVIKMG S D+ + L+ +Y+ + E + F E+++VV W M+ Y
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
++ + M+ EG MP++ T S+L C LG LDLG ++H +++G + +
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+ LIDMY+K +D A + ++ +++V+SWT++I G ++ EAL F++M +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD-----GFLPNALLDMYVRCGRM 550
+ +++ S +SACA I AL G++IHA + G + D N L+ +Y +CG +
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSI 572
Query: 551 KPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A +F E++V +WN ++TGY++ G G+ A F +M
Sbjct: 573 EDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 613
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 256/477 (53%), Gaps = 4/477 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K+ LG+ + +++ G++ +A +F + ++ WN +I G
Sbjct: 32 LHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKL 91
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ L L+ M V PD TF VLR C GG + +++H +I G+ + V
Sbjct: 92 ASQVLGLFSLMI-TENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVC 150
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N LI +Y K G + A+LVF+ + +D +SW AMISG +NG + ++LF M + V
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P SSV+SA + KLG ++HG+++K G S + VCN L+ +Y +GN E++
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
FS+M +D +S+ ++IS D+A++ ++ M+ + PD +T+AS+LSACA +G
Sbjct: 271 FSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAG 330
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +LH ++ G+ S +II +L+D+Y KC I+ A E F +NV+ W +++
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 476 -RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+L N S IF + + L PN T SIL C +GAL G++IH ++ G F+
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ + L+DMY + G + A E DV +W ++ GY + A A + F++M
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEM 507
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 238/478 (49%), Gaps = 20/478 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG ++A+ M + + +++ C + G LH + K
Sbjct: 188 LSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSE 247
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ NA ++++ ++G+L A +F KM RD S+N LI G A+ GF D AL L+++M
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM-Q 306
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ +KPD T +L C V +GK++H +VI+ G +D+ + +L+ +YVKC D+
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A F + + WN M+ Y + G + +F+ M+ + P+ T S++
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG ++H VIK GF +V VC+ LI MY G + + R+ +DVVSWT
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTA 486
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y L +A++ +Q ME +G D I +S +SACA + L+ G ++H + +G
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 430 L-----ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
I + +N LI +YSKC I+ A F ++P+KNV+SW ++I G + EA
Sbjct: 547 YSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEA 606
Query: 485 LIFFRKM-MLNLKPNSVTLV-------------SILSACARIGALMCGKEIHAHALRI 528
+ F +M L L PN VT V ++LSAC + G+ H L +
Sbjct: 607 VSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLEL 664
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 214/399 (53%), Gaps = 5/399 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++ +V T+ + C L K++H + + G++ + + + LI +Y+ G++ A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SEL 310
+FD +P + WN +ISG + L LF +M V PD T +SV+ A S
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
++ ++H +I GF VCNPLI +Y G+ + + VF R+ KD VSW M
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + D+A+ + M +P +SVLSAC + LG +LH ++ GL
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + N L+ +YS+ + A ++F ++ ++ IS+ S+I GL S AL F K
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L+ +KP+ VT+ S+LSACA +GA GK++H++ +++G++ D + +LLD+YV+C
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
++ A F + E +V WN++L Y + G L+E ++
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGN--LSESYW 401
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 3/277 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+++H + K GF + + + LI +YL+ G + K+F + S +V W +IS
Sbjct: 29 AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLA 88
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGLISYII 435
L + + + +M E PDE T ASVL AC+ + ++H + G S +
Sbjct: 89 KKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPL 148
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N LID+YSK +D A VF ++ K+ +SW ++I GL N R EA++ F +M +
Sbjct: 149 VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ P S+LSAC +I G+++H ++ G++ + F+ NAL+ +Y R G + A
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE 268
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + RD ++N L++G A+RG A + F KM
Sbjct: 269 QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
ME G + T + C G+L KLH ++G ++ + LID+Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+D A+++F IP NV W +I GL + + L F M+ N+ P+ T S+L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 509 CARIGA-LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
C+ A ++IHA + G + N L+D+Y + G + A F +D +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDS 593
W +++G ++ G+ A F +M S
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKS 207
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 275/528 (52%), Gaps = 12/528 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL +M+ + +E AL +++ R G +H++ T V +
Sbjct: 81 NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHDVFV 137
Query: 133 GNAFLSMFVKFGDLGHAWYVF----GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
NA ++++ FG + A +F G +R+ SWN +I Y K +A+ +++ M
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
W G +P+ + F CV+ C G DL+ G++VH V+R GYE DV NAL+ MY K GD+
Sbjct: 198 W-SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF+ MP D +SWNA ISG +G + L L + M+ + P+ TLSSV+ A
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G LGR++HG+++K D V L+ MY G ++ KVF M +D++ W
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWN 376
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPD--EITIASVLSACACLGNLDLGIKLHQLAM 426
+IS + + + M EG D T+ASVL + A + ++H LA
Sbjct: 377 ALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAE 436
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL+S + N LID Y KC +D A++VF + ++IS T+++ L + +A+
Sbjct: 437 KIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIK 496
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F +M+ L+P+S L S+L+AC + A GK++HAH ++ D F NAL+ Y
Sbjct: 497 LFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYA 556
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+CG ++ A F+ ER + +W+ ++ G A+ G G A + F +M+D
Sbjct: 557 KCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLD 604
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 233/477 (48%), Gaps = 7/477 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V C R + G +H V +T V NA + M+ K GD+ A VF KM D
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN I G G AL L +M G+ P+V+T VL+ C G G+++H
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQM-KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIH 329
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ + D V L+ MY K G L AR VFD MP+RD I WNA+ISG +G +
Sbjct: 330 GFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389
Query: 281 KGLMLFIMMREVLVDPDF--MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L LF MR+ +D D TL+SV+ ++ R+VH K+G D V N
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI Y G + KVF S D++S TTM++ + A++ + M +G PD
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++S+L+AC L + G ++H ++ S + N L+ Y+KC I+ A F
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFS 569
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+P++ ++SW+++I GL + AL F +M+ + PN +TL S+LSAC G +
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629
Query: 518 GKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
K+ + G+ ++D+ R G+++ A N+ + + + W LL
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 191/398 (47%), Gaps = 11/398 (2%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T L G L G +H H+++ G A N L+T+Y +C AR VFD +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEI 63
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P +SW+++++ Y NG L+ F MR V + L V+ + D + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRFGA 120
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM----ESKDVVSWTTMISCY 374
+VH + DV V N L+ +Y FG +E ++F ++ VSW TMIS Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A+ ++ M G P+E + V++AC +L+ G ++H +RTG +
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
AN L+DMYSK I+ A VF ++P +V+SW + I G + AL +M +
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
L PN TL S+L ACA GA G++IH ++ FD F+ L+DMY + G + A
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360
Query: 554 WNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ RD+ WN L++G + G+ F +M
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 5/419 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ +G +AL+ L M+ + + L ++++ C ++ G +H + K
Sbjct: 275 NAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVK 334
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + + M+ K G L A VF M RDL WN LI G + G E LSL
Sbjct: 335 AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSL 394
Query: 184 YQRMFWVGGVKPDV--YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ RM G+ DV T VL++ + ++VH + G +D V+N LI
Sbjct: 395 FHRM-RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDS 453
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG L A VF D IS M++ + + LF+ M ++PD L
Sbjct: 454 YWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVL 513
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SS+++A + + G++VH ++IK F+ DV N L+ Y G+ E+ + FS +
Sbjct: 514 SSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPE 573
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ +VSW+ MI +A++ + M EG P+ IT+ SVLSAC G +D K
Sbjct: 574 RGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY 633
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ T G+ +ID+ + ++ A+E+ + +P N W +++ R++
Sbjct: 634 FESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVH 692
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI S L+ +L G LH +++GL++ +N L+ +YS+C+ A VF +I
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEI 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACA---RIGALMC 517
PD +SW+S++ N +AL+ FR M P + + ++ CA R GA
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGA--- 120
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-----NERDVSAWNILLT 572
++HA A+ + D F+ NAL+ +Y G + A F+ ER+ +WN +++
Sbjct: 121 --QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 573 GYAERGQGALAEEFFRKMI 591
Y + Q A FR+M+
Sbjct: 179 AYVKNDQSGDAIGVFREMV 197
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 264/499 (52%), Gaps = 10/499 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
++L+ C + E +H K S+ + + +++ + A +F ++ +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ WN +I YA G FD A+ LY M +G V+P+ YT+P VL+ C G+ ++ G E
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H H FG E+DV V AL+ Y KCG LV A+ +F M RD ++WNAMI+G G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSV 335
+ L + M+E + P+ T+ V+ VG+ K G+ +HGY ++ F + V V
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPT---VGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY K+F M ++ VSW+ MI Y S +A+E + M + +
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDA 307
Query: 396 M-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
M P +T+ SVL ACA L +L G KLH ++ G + I++ NTL+ MY+KC ID A+
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
F ++ K+ +S+++I+ G N + AL FR M L+ + P+ T++ +L AC+ +
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLT 572
AL G H + + G A D + NAL+DMY +CG++ A FN +R D+ +WN ++
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 487
Query: 573 GYAERGQGALAEEFFRKMI 591
GY G G A F ++
Sbjct: 488 GYGIHGLGMEALGLFHDLL 506
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 271/552 (49%), Gaps = 32/552 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + A+ SM L + ++ +++ C ++G+ +HS V +
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + + K G L A +F M RD+ +WN +I G + G D+A+ L +M G
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM-QEEG 205
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T VL T G L GK +H + +R ++ V V L+ MY KC L+ AR
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYAR 265
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELV 311
+FD M R+ +SW+AMI GY + + L LF M+ + +DP +TL SV+ A +
Sbjct: 266 KIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKL 325
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D GR++H Y+IK+G D+ + N L+ MY G ++ + F M KD VS++ ++
Sbjct: 326 TDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIV 385
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + A+ ++MM+ G PD T+ VL AC+ L L G H + G
Sbjct: 386 SGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFA 445
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +I N LIDMYSKC I A EVF+++ +++SW ++I+G ++ EAL F +
Sbjct: 446 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 505
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG------FLPN-----A 539
+ L LKP+ +T + +LS+C+ G +M G+ + FD +P
Sbjct: 506 LALGLKPDDITFICLLSSCSHSGLVMEGR----------LWFDAMSRDFSIVPRMEHCIC 555
Query: 540 LLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKM----ID 592
++D+ R G + A + F N E DV W+ LL+ L EE +K+ +
Sbjct: 556 MVDILGRAGLIDEA-HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 593 SKGNWRKLMGLF 604
S GN+ L ++
Sbjct: 615 STGNFVLLSNIY 626
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 7/454 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G + A++ + MQE IC + +V ++ + G LH +
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR 238
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G L M+ K L +A +F M R+ SW+ +IGGY + EAL L
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALEL 298
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + P T VLR C + DL RG+++H ++I+ G D+ + N L++MY
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A FD M +D +S++A++SG +NG L +F MM+ +DPD T+
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + G HGY+I GF+ D +CN LI MY G +VF+RM+ D
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLH 422
+VSW MI Y L +A+ + + A G PD+IT +LS+C+ G + G +
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
++ ++ + ++D+ + ID+A +P + +V W++++ R+ +++
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRI-HKN 597
Query: 482 FEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
E K + +L P S V L +I SA R
Sbjct: 598 IELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 278/529 (52%), Gaps = 11/529 (2%)
Query: 57 SIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL- 115
SI+ +P S L +LC G+L QAL+ L S Q ++ ++ L K+ +G+
Sbjct: 22 SISPPDPTS-LKQLCKEGNLRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQ 79
Query: 116 -YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+ H+V + ++ L L M+ K G + A +F M R +FSWN LIG Y +
Sbjct: 80 VHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS 139
Query: 175 GFFDEALSLYQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G EAL +Y+ R+ GV PD T VL+ G D + G EVH ++ G +
Sbjct: 140 GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V NALI MY KCG L A VF+ M RD SWN+MISG +NG +++ L LF M+
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
++ + T V+ + LGRE+H ++K G ++ CN L+ MY G +
Sbjct: 260 AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDS 318
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF ++ KD +SW +M+SCY + L +A+E M G PD I S+ SA
Sbjct: 319 ALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH 378
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG L G ++H A++ L S + NTL+DMY KC+ I+ + VF ++ K+ ISWT+I
Sbjct: 379 LGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I ++R EAL FR+ +K + + + SIL AC+ + ++ K++H +A+R G+
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL 498
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
D + N ++D+Y CG + + F + E +D+ W ++ YA G
Sbjct: 499 -LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSG 546
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 260/483 (53%), Gaps = 6/483 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYA 172
G +H + K S + NA ++M+ K G L A VF M D RD+ SWN +I G
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G F +AL L++ M + + YT VL+ C + L G+E+H +++ G E ++
Sbjct: 243 QNGMFLQALDLFRGM-QRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI 301
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
NAL+ MY KCG + A VF + ++D ISWN+M+S Y +NG Y + + M
Sbjct: 302 QC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRG 360
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
PD + S+ SA +G G+EVH Y IK D V N L+ MY+ E
Sbjct: 361 GFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYS 420
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF RM KD +SWTT+I+CY S +A+E ++ + EG D + I S+L AC+ L
Sbjct: 421 AHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGL 480
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ L +LH A+R GL+ +++ N +ID+Y +C + +L++F + K++++WTS+I
Sbjct: 481 ETILLAKQLHCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMI 539
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
+ EAL+ F +M +++P+SV LVSIL A + +L GKE+H +R
Sbjct: 540 NCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFH 599
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + ++L+DMY CG + A FN+ + +D+ W ++ G G A + F++M
Sbjct: 600 MEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRM 659
Query: 591 IDS 593
+ +
Sbjct: 660 LQT 662
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 218/426 (51%), Gaps = 13/426 (3%)
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K G +AL L G P + VL + +G +VH H + G
Sbjct: 36 KEGNLRQALRLLTSQ--TPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGD 93
Query: 233 D--VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D + L+ MY KCG + ARL+FDGM R SWNA+I Y +G + L ++ MR
Sbjct: 94 DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153
Query: 291 ---EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
V PD TL+SV+ AS + GD + G EVHG +K G V N LI MY G
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213
Query: 348 NREEGEKVFSRM-ESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
+ +VF M + +DV SW +MIS C + + +A++ ++ M+ + T V
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFL-QALDLFRGMQRAVLSMNSYTTVGV 272
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L C L L+LG +LH +++G I N L+ MY+KC +D AL VF +I +K+
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSG-SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDY 331
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAH 524
ISW S++ N EA+ F +M+ +P+ +VS+ SA +G L+ GKE+HA+
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALA 583
A++ + D + N L+DMY++C ++ + + F+ +D +W ++T YA+ + A
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEA 451
Query: 584 EEFFRK 589
E FR+
Sbjct: 452 LEIFRE 457
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 241/517 (46%), Gaps = 12/517 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG +A++++ M D +V+L G +H+ K
Sbjct: 335 NSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIK 394
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++GN + M++K + ++ +VF +M +D SW +I YA++ EAL +
Sbjct: 395 QRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEI 454
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R G+K D +L C G+ + K++H + IR G D+ V N +I +Y
Sbjct: 455 F-REAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYG 512
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG++ + +F+ + ++D ++W +MI+ Y +G + L+LF M+ V PD + L S
Sbjct: 513 ECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVS 572
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + G+EVHG++I+ F + ++ + L+ MY G+ KVF+ ++ KD
Sbjct: 573 ILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKD 632
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V WT MI+ +A++ ++ M G PD ++ ++L AC+ ++ G
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLD 692
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
+ M T L + ++D+ + ++A E +P K + W S++ R+ +++
Sbjct: 693 MMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRV-HKN 751
Query: 482 FEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
E + +L L+P N V + + A +G KE+ A G+ D
Sbjct: 752 HELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACS--- 808
Query: 541 LDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAER 577
++ G + +++ RD N+ L ER
Sbjct: 809 ---WIEIGNNVHTFTTRDNSHRDAERINLKLAEITER 842
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 144/283 (50%), Gaps = 9/283 (3%)
Query: 317 GREVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G +VH + + G DD + L+ MY G + +F M S+ V SW +I Y
Sbjct: 77 GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136
Query: 375 EGSVLPDKAVETYQMME---AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S +A+ Y+ M A G PD T+ASVL A G+ G ++H LA++ GL
Sbjct: 137 LSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLD 196
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRK 490
+AN LI MY+KC +D A+ VF + D ++V SW S+I G N +AL FR
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L NS T V +L C + L G+E+HA L+ G + NALL MY +CGR
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGR 315
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ A F +E+D +WN +L+ Y + G A A EF +M+
Sbjct: 316 VDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEML 358
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 45 QSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL 104
S+++ T I T S +N +G L +AL MQ ++ D ALV+++
Sbjct: 519 HSLKMFETVEQKDIVTWT--SMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGA 576
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
+G +H + + H+ + ++ + M+ G L A VF + +D+ W
Sbjct: 577 IGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLW 636
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+I G +A+ L++RM GV PD +F +L C + GK
Sbjct: 637 TAMINATGMHGHGKQAIDLFKRMLQT-GVTPDHVSFLALLYACSHSKLVNEGK 688
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/560 (28%), Positives = 293/560 (52%), Gaps = 16/560 (2%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDE-DALVNLVR- 103
S + L+T+ + ++ N+ + E +G + A+ M + + V+E L++
Sbjct: 59 SSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA 118
Query: 104 ---LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
LC+ +G +H V K V + N+ L+M+ K G + A +F KM + D
Sbjct: 119 FGGLCDVYKGRQ----IHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVD 174
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN +I G+ K+ + +L ++ M W G+ P+ + +C + L G+E+H
Sbjct: 175 LVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIH 234
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS-----WNAMISGYFE 275
V++ G + + +V++LI MY+KCG + A +F+ + +D + WN MISGY
Sbjct: 235 GVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVS 294
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + + L+LFI M + PD+ T+ S+ S D G+++HG + K G +++ V
Sbjct: 295 NGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRV 354
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MYL G+ G K+F R ++ +++ W+ +IS S P KA+E + + E
Sbjct: 355 ETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG 414
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+ D + +VL AC+ L G+++H LA + G +S + + + L+D+Y+KC+ + + +
Sbjct: 415 LADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKK 474
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGA 514
VF ++ K+++SW ++I G + + EAL FR M L ++PN+VT+ ILS CA +
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSV 534
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
+ KE+H + +R G+ + N+L+ Y +CG + + F ER+ +WN ++ G
Sbjct: 535 MTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILG 594
Query: 574 YAERGQGALAEEFFRKMIDS 593
+ F KM+ S
Sbjct: 595 MGMHSRTDEMIVLFDKMVAS 614
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 277/540 (51%), Gaps = 18/540 (3%)
Query: 78 QALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++L + SM E I + A V+ + C + G +H VV K+ + L ++
Sbjct: 193 RSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSL 252
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFS-----WNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ M++K G + +A +F + D+D WNV+I GY G F +AL L+ +M V
Sbjct: 253 IEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM-VW 311
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+KPD T + C D+ GK++H + +FG + ++ V AL+ MY+KCGD+
Sbjct: 312 GIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTG 371
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISASE 309
+F + I W+A+IS ++G K L LF M + L D L +V+ A
Sbjct: 372 LKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGI--LVAVLRACS 429
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G ++HG KMGF DV V + L+ +Y + +KVF R+ KD+VSW
Sbjct: 430 SLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNA 489
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y D+A++ ++ M+ E P+ +TIA +LS CA L + L ++H +R G
Sbjct: 490 LISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQG 549
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L S ++++N+LI Y+KC I+ +L F ++P++N +SW SIILG+ +++R+ E ++ F
Sbjct: 550 LGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFD 609
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRC 547
KM+ + +KP+ VT +ILSAC+ G + G K + + ++D+ R
Sbjct: 610 KMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRA 669
Query: 548 GRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE---EFFRKMIDSKGNWRKLMG 602
G + A++ + D W LL G LAE K++ S +R L+
Sbjct: 670 GHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLA 729
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 189/394 (47%), Gaps = 10/394 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG QAL M I D +V+L LC G +H ++ K ++R+
Sbjct: 295 NGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRV 354
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M++K GD+G +F + + +L W+ +I A++G +AL L+ G
Sbjct: 355 ETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG 414
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D VLR C + G ++H + G+ +DV V +AL+ +Y KC D+ ++
Sbjct: 415 L-ADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSK 473
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + ++D +SWNA+ISGY ++ + L F M+ + P+ +T++ ++S +
Sbjct: 474 KVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLS 533
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
L +EVHGY+I+ G V V N LI Y G+ F +M ++ VSW ++I
Sbjct: 534 VMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIIL 593
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-----LHQLAMR 427
D+ + + M A G PD +T ++LSAC+ G +D G K + ++
Sbjct: 594 GMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLK 653
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
L Y ++D+ + +++A ++ +P
Sbjct: 654 PQLEQY----TCMVDLLGRAGHLNQAYDLIMAMP 683
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 279/548 (50%), Gaps = 5/548 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +++++ M++L + D L +++C G+ +H + +
Sbjct: 126 NSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQ 185
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A + M+ K L + VF ++ D++ SW+ I G + L L
Sbjct: 186 MGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKL 245
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G+ T+ V R+C G+ + G ++H H ++ + +DV V A + MY
Sbjct: 246 FKEM-QRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYA 304
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC ++ A +F +P + S+NAMI GY N + + LF+ +++ D ++LS
Sbjct: 305 KCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSG 364
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SA+ ++ G ++HG IK S ++ V N ++ MY G E +F ME +D
Sbjct: 365 ALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRD 424
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW +I+ E + K + + M PDE T SVL ACA G+++H
Sbjct: 425 PVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHG 484
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++G+ + + + L+DMYSKC +++A ++ +++ ++ ++SW +II G L +S +
Sbjct: 485 RIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSED 544
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ FF M+ + ++P++ T ++L CA + + GK+IHA +++ + D ++ + L+D
Sbjct: 545 SQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVD 604
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRK 599
MY +CG M + F + +RD WN ++ G+A G G A E F M+ K N
Sbjct: 605 MYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHAT 664
Query: 600 LMGLFRKC 607
+ + R C
Sbjct: 665 FVSVLRAC 672
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 261/527 (49%), Gaps = 35/527 (6%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++ + C +R G H+ + + +V + N + M+VK L +A+ VF +M R
Sbjct: 29 HIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQR 88
Query: 160 DLFSWNV--------------------------------LIGGYAKAGFFDEALSLYQRM 187
D+ SWN LI GY + G ++++++ +M
Sbjct: 89 DIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKM 148
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+ GV D T L+ C + D G ++H ++ G++ DV +AL+ MY KC
Sbjct: 149 RDL-GVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNS 207
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L + VF +P ++ ISW+A I+G +N + ++GL LF M+ + T +SV +
Sbjct: 208 LEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRS 267
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ +LG ++H + +K F DV V + MY N + K+FS + ++ S+
Sbjct: 268 CAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSY 327
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI Y + +A + + ++ DE++++ LSA A + G++LH LA++
Sbjct: 328 NAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIK 387
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ L S I +AN ++DMY KC + +A +F ++ ++ +SW +II N + L
Sbjct: 388 SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSH 447
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F M+ + ++P+ T S+L ACA A G E+H ++ G+ F+ +AL+DMY +
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507
Query: 547 CGRMKPAWN-QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
CG M+ A + E+ + +WN +++G++ + + ++ FF M++
Sbjct: 508 CGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLE 554
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 217/442 (49%), Gaps = 2/442 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L + LK MQ I V + ++ R C G LH KT V +
Sbjct: 236 NDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIV 295
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L M+ K ++ A+ +F + D +L S+N +I GYA+ +A L+ ++
Sbjct: 296 GTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQL-QKNS 354
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
D + L + G ++H I+ +++ V NA++ MY KCG LV A
Sbjct: 355 FSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS 414
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M RD +SWNA+I+ +N K L F M ++PD T SV+ A
Sbjct: 415 GLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQR 474
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G EVHG +IK G + V + L+ MY G EE EK+ R+E + +VSW +IS
Sbjct: 475 AFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIIS 534
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + + + M G PD T A+VL CA L + LG ++H ++ L+S
Sbjct: 535 GFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLS 594
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ I +TL+DMYSKC + +L +F + P ++ ++W ++I G + EAL F M+
Sbjct: 595 DVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHML 654
Query: 493 L-NLKPNSVTLVSILSACARIG 513
N+KPN T VS+L AC+ +G
Sbjct: 655 HENIKPNHATFVSVLRACSHVG 676
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 219/435 (50%), Gaps = 44/435 (10%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF + + C LK GKE H H+I G+ V V N LI MYVKC L A VF+ M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 259 PKRDRISWNAM--------------------------------ISGYFENGEYMKGLMLF 286
P+RD +SWN M ISGY +NG+ K + +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ MR++ V D TL+ + L+ D+ LG ++HG ++MGF DV + L+ MY
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 347 GNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
+ E+ VFS + K+ +SW+ I+ C + L + ++ ++ M+ +G + T ASV
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLL-RGLKLFKEMQRKGIGVSQSTYASV 264
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+CA L LG +LH A++T S +I+ +DMY+KC + A ++F +PD N+
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS-----VTLVSILSACARIGALMCGKE 520
S+ ++I+G N + F+A K+ L L+ NS V+L LSA A I G +
Sbjct: 325 QSYNAMIIGYARNEQGFQAF----KLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ 380
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ 579
+H A++ ++ + + NA+LDMY +CG + A F+ E RD +WN ++T +
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440
Query: 580 GALAEEFFRKMIDSK 594
F M+ SK
Sbjct: 441 EGKTLSHFGAMLRSK 455
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 209/432 (48%), Gaps = 4/432 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QA K +Q+ + DE +L + +G+ EGL LH + K+ ++ + NA L
Sbjct: 342 QAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAIL 401
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A +F +M RD SWN +I + + LS + M ++PD
Sbjct: 402 DMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLR-SKMEPDE 460
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C G G EVH +I+ G + V +AL+ MY KCG + A +
Sbjct: 461 FTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYR 520
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ ++ +SWNA+ISG+ + F M E+ V+PD T ++V+ + LG
Sbjct: 521 LEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLG 580
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++H +IK+ DV + + L+ MY GN + +F + +D V+W MI +
Sbjct: 581 KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYH 640
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMRTGLISYIII 436
L ++A+E ++ M E P+ T SVL AC+ +GN G+ ++A L +
Sbjct: 641 GLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEH 700
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ ++D+ + +++AL + +P + + I W +++ ++ + E +L L
Sbjct: 701 YSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQG-NVEVAEKAASSLLKL 759
Query: 496 KPNSVTLVSILS 507
P + ++LS
Sbjct: 760 DPEDSSAYTLLS 771
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 270/549 (49%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +G ++ M + +D L L++ C G+ +H++ K
Sbjct: 120 NTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVK 179
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T VR G+A + M+ K L A F M +R+ SW I G + + + L
Sbjct: 180 TGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMEL 239
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ +M +G GV Y R+C +P L +++H H I+ + +D V A++ +Y
Sbjct: 240 FVQMQRLGLGVSQPAYA--SAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVY 297
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K G+LV AR F G+P + + NAM+ G G + + LF M V D ++LS
Sbjct: 298 AKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLS 357
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V SA V G +VH +K GF DV V N ++ +Y E VF ME +
Sbjct: 358 GVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 417
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + + + M G PD+ T SVL ACA L +L+ G+ +H
Sbjct: 418 DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A+++GL +++T++DMY KC I +A ++ +I + ++SW SII G L +S
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSE 537
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FF +M+ + +KP+ T ++L CA + + GK+IH ++ + D ++ + L+
Sbjct: 538 EAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLV 597
Query: 542 DMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWR 598
DMY +CG M + F + D +WN ++ GYA GQG A E F +M + N
Sbjct: 598 DMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHA 657
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 658 TFVAVLRAC 666
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 247/475 (52%), Gaps = 5/475 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V TM H N L+ +V GD A +FG M D D+ SWN LI GY + G F +
Sbjct: 76 VFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNS 135
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L M GV D T +L++CGG+ DL G ++H ++ G E DV +AL+
Sbjct: 136 VGLSMEMSRR-GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC L A F GM +R+ +SW A I+G +N +Y +G+ LF+ M+ + +
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPA 254
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+S + + R++H + IK FS D V ++ +Y GN + + F +
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+V + M+ + L +A++ +Q M G D I+++ V SACA + G++
Sbjct: 315 HHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQ 374
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H LA+++G + + N ++D+Y KCK + +A VF ++ ++ +SW +II L N
Sbjct: 375 VHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE-QNE 433
Query: 481 SFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+E I ML ++P+ T S+L ACA + +L G +H A++ G+ D F+ +
Sbjct: 434 CYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DMY +CG + A + +++ +WN +++G++ Q A+ FF +M+D
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLD 548
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 221/444 (49%), Gaps = 2/444 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + ++ MQ L + V + A + R C LH+ K + +
Sbjct: 230 NEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVV 289
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K G+L A F + ++ + N ++ G + G EA+ L+Q M G
Sbjct: 290 GTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTR-SG 348
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V DV + V C V +G +VH ++ G++ DV V NA++ +Y KC LV A
Sbjct: 349 VGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAY 408
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF M +RD +SWNA+I+ +N Y + M ++PD T SV+ A +
Sbjct: 409 LVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQ 468
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G VHG IK G D V + ++ MY G E +K+ R+ +++VSW ++IS
Sbjct: 469 SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIIS 528
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + ++A + M G PD T A+VL CA L ++LG ++H ++ ++
Sbjct: 529 GFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLG 588
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++TL+DMY+KC + +L +F + + +SW ++I G L+ + EAL F +M
Sbjct: 589 DEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQ 648
Query: 493 -LNLKPNSVTLVSILSACARIGAL 515
N+ PN T V++L AC+ +G L
Sbjct: 649 RANVVPNHATFVAVLRACSHVGLL 672
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 184/396 (46%), Gaps = 17/396 (4%)
Query: 184 YQRMFWVGGVKPDVYTFPCVLRT---CGGVPDLKRGKEVHVHVIRFGYEADVDVV--NAL 238
+ RM V G P + C+L+ CGG H H + F D V N +
Sbjct: 42 HARML-VSGFMPTTFVSNCLLQMYARCGGT--------AHAHGV-FDTMPHRDTVSWNTM 91
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+T YV GD A +F MP D +SWN +ISGY ++G + + L + M V D
Sbjct: 92 LTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDR 151
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
TL+ ++ + + D LG ++H +K G DV + L+ MY + ++ + F
Sbjct: 152 TTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHG 211
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M ++ VSW I+ + + +E + M+ G + AS +CA + L
Sbjct: 212 MGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTA 271
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+LH A++ S ++ ++D+Y+K + A F +P NV + ++++GL
Sbjct: 272 RQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRT 331
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EA+ F+ M + + + ++L + SACA + G ++H A++ G D +
Sbjct: 332 GLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVR 391
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLT 572
NA+LD+Y +C + A+ F E RD +WN ++
Sbjct: 392 NAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIA 427
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L N E + +L+ M + D+ ++++ C + + GL +H K
Sbjct: 423 NAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIK 482
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L + + + M+ K G + A + ++ ++L SWN +I G++ +EA
Sbjct: 483 SGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRF 542
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +G VKPD +T+ VL TC + ++ GK++H +I+ D + + L+ MY
Sbjct: 543 FSEMLDMG-VKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYA 601
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ + L+F+ K D +SWNAMI GY +G+ ++ L +F M+ V P+ T +
Sbjct: 602 KCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVA 661
Query: 304 VISASELVG 312
V+ A VG
Sbjct: 662 VLRACSHVG 670
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 499 SVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ T + CA G AL G+ HA L G F+ N LL MY RCG A
Sbjct: 17 TATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGV 76
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLM------GLFR 605
F++ RD +WN +LT Y G A F M D +W L+ G+FR
Sbjct: 77 FDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFR 133
>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 955
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 270/536 (50%), Gaps = 24/536 (4%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSH 127
CL NG LE++L Y M D +L + C + + E ++ + +
Sbjct: 276 CLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDN 335
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V + N+ +S++ + + A VF +M +D+ SWN ++ GYA EA L M
Sbjct: 336 SFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEM 395
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD-VDVVNALITMYVKCG 246
G +PD+ T +L C + + G+ +H + IR D + + N LI MY KC
Sbjct: 396 QTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCN 455
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV-------DPDFM 299
+ +A L+F + D +SWNAMISGY +N Y K LF +E+L F
Sbjct: 456 VVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLF---KELLCCGQNCSSSTVFA 512
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
LSS SA+ L G+ VH + +K GF + + N L++MY++ G+ G +
Sbjct: 513 ILSSCNSANSL----NFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQEN 568
Query: 360 ES-KDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACACLGNLD 416
S D+ SW T+I C G + A+ET+ +M S D IT+ +VLSA A + L+
Sbjct: 569 SSIADIASWNTIIVGCVRGDQFQE-ALETFMLMRQGPSFNYDSITLVNVLSAVANIELLN 627
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G LH LA+++ S + N+LI MY +C+ I+ A +VF N+ +W +I L
Sbjct: 628 QGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALS 687
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N S EAL FR L KPN T+VS+LSAC RIG L+ GK++H + R G + F+
Sbjct: 688 HNKESREALELFRH--LQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFI 745
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
AL+D+Y CGR+ A F +++ SAWN ++ Y G G A E F +M D
Sbjct: 746 SAALVDLYSTCGRLDNAVKVFRHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCD 801
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 257/524 (49%), Gaps = 13/524 (2%)
Query: 79 ALKYLDSMQELNICVDE---DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
A+ D M + N V E D +V+ ++L K +H KT + + +
Sbjct: 78 AINLFDKMPQRNFHVREVHFDLVVDCIKLSLEKPNIFTATVVHCAALKTGALAYLPTSTS 137
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+++ K GD + +F + +RD+ +WN +I + + A+ +Q+M +
Sbjct: 138 LFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMI-KDQTRF 196
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL--VRARL 253
D T V+ T + + +G+ +H I+ G D+ + NALI MY KCGD+ +
Sbjct: 197 DSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSEC 256
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ M +D +SWN+++ G NG+ K L F M D ++LS ISA +G+
Sbjct: 257 LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGE 316
Query: 314 EKLGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +HG IK+G+ D+ VSV N LI +Y + E VF M KD+VSW M+
Sbjct: 317 LAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMM 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
Y + +A + M+ G PD +T+ ++L CA L G +H A+R +
Sbjct: 377 EGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHM 436
Query: 431 I-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ ++ + N LIDMYSKC ++KA +FH +++SW ++I G N +A F+
Sbjct: 437 VPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFK 496
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+++ +S T+ +ILS+C +L GK +H L+ G L N+L+ MY+ G
Sbjct: 497 ELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSG 556
Query: 549 RMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++ Q NS+ D+++WN ++ G Q A E F M
Sbjct: 557 DLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLM 600
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 260/530 (49%), Gaps = 15/530 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N A+++ M + D L+ +V + + +G +H V K+ + + L
Sbjct: 176 NKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISL 235
Query: 133 GNAFLSMFVKFGDLGH--AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
NA ++M+ K GD+ + +F +M +D+ SWN ++ G G +++L ++RM +
Sbjct: 236 CNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNF- 294
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD--VDVVNALITMYVKCGDL 248
+ D + C + C + +L G+ +H I+ GY+ + V V N+LI++Y +C +
Sbjct: 295 SEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAV 354
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISA 307
A VF M +D +SWNAM+ GY N + L + M+ PD +TL++++
Sbjct: 355 DVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPL 414
Query: 308 SELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ + GR +HGY I+ D + + N LI MY E+ E +F D+VS
Sbjct: 415 CAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVS 474
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W MIS Y + +KA ++ + G T+ ++LS+C +L+ G +H +
Sbjct: 475 WNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQL 534
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEAL 485
++G +++ ++ N+L+ MY + + + ++ SW +II+G ++ EAL
Sbjct: 535 KSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEAL 594
Query: 486 IFFRKMMLNLKP----NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
F M++ P +S+TLV++LSA A I L GK +H+ AL+ D + N+L+
Sbjct: 595 ETF--MLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLI 652
Query: 542 DMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY RC + A F + ++ WN +++ + + A E FR +
Sbjct: 653 TMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL 702
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 207/391 (52%), Gaps = 12/391 (3%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
P++ VH ++ G A + +L T+Y K GD +R++F+ + RD I+WNA+I
Sbjct: 111 PNIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAII 170
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
S EN Y + F M + D TL V+S + + GR +H IK G
Sbjct: 171 SASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGML 230
Query: 331 DDVSVCNPLIKMYLSFG--NREEGEKVFSRMESKDVVSWTT-MISC-YEGSVLPDKAVET 386
D+S+CN LI MY G N + E +F ME KDVVSW + M C Y G + +K++
Sbjct: 231 VDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDL--EKSLCY 288
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTLIDMY 444
++ M D ++++ +SAC+ LG L G +H ++ G S++ +AN+LI +Y
Sbjct: 289 FRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLY 348
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTL 502
S+C+ +D A VF ++ K+++SW +++ G N EA +M +P+ VTL
Sbjct: 349 SQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTL 408
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQFNSNE 561
++L CA + G+ IH +A+R + D L N L+DMY +C ++ A F+S
Sbjct: 409 TTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTA 468
Query: 562 R-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ D+ +WN +++GY++ A+ F++++
Sbjct: 469 QIDLVSWNAMISGYSQNKYYEKAQNLFKELL 499
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 5/293 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L N+ + M++ GDL + + + D+ SWN +I G + F EAL + M
Sbjct: 544 LVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQG 603
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
D T VL + L +GK +H ++ + +D V N+LITMY +C D+
Sbjct: 604 PSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINS 663
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF + +WN MIS N E + L LF R + P+ T+ SV+SA
Sbjct: 664 ARKVFKFHSISNLCTWNCMISALSHNKESREALELF---RHLQFKPNEFTIVSVLSACTR 720
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G G++VHGY + G+ + + L+ +Y + G + KVF R K +W +M
Sbjct: 721 IGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVF-RHSQKSESAWNSM 779
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
I+ Y +KA+E + M G + T S+LSAC+ G ++ G++ ++
Sbjct: 780 IAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYE 832
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 296/586 (50%), Gaps = 33/586 (5%)
Query: 23 TRIPETSFYF-KPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALK 81
T P++S++F +T+ S++ V L+ +++LC G L AL
Sbjct: 41 TSTPKSSYFFVSARTQSHQSRSVNPVSQLSLL-----------EEISKLCEAGDLNGALD 89
Query: 82 YLDSMQELNICVD----EDALVNLVRLC------EWKRGYDEGLYLHSVVSKTMSHLSVR 131
+L + N D ++A+ L++ C E R DE L + S S L+ R
Sbjct: 90 FLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFV-LNTR 148
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L ++M+ G + VF ++ +++LF WN L+ GY + +DEA+ + + V
Sbjct: 149 L----ITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+PD +TFPC+++ C G D+ GK VH ++ G D+ V NA+I +Y KCG L A
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEA 264
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASE 309
+FD MP+++ ISWN++I G+ ENG +++ F + E + PD T+ +++
Sbjct: 265 VELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G+ +G +HG +K+G ++ VCN LI MY G E +F ++E+K VVSW +
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 370 MISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI Y EG V + ME E +E+TI ++L AC L LH ++R
Sbjct: 385 MIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLR 444
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+I N I Y+KC + A VF + K+V SW ++I G N +AL F
Sbjct: 445 HSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ +M L + P+ ++VS+L AC R+G L GKEIH LR G+ + F+ +LL +Y
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
C + F + +++ WN +L+GY++ A FR+M+
Sbjct: 565 CSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQML 610
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 269/542 (49%), Gaps = 11/542 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN--ICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS + NG +A + S+ E + D +V L+ +C + D G+ +H +
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMA 339
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + + NA + M+ K G L A +F K+ ++ + SWN +IG Y++ GF E
Sbjct: 340 VKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETF 399
Query: 182 SLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++M W+ ++ + T +L C +L + +H + +R ++ + NA I
Sbjct: 400 DLLRKM-WMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
Y KCG LV A VF GM + SWNA+I G+ +NG+ +K L + M + + PD
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDF 518
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
++ S++ A +G + G+E+HG+V++ G + V L+ +Y G F M
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETM 578
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ V W M+S Y + LP++A+ ++ M ++G PDEI IAS+L AC+ L L LG
Sbjct: 579 GDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H A++ L+ +A +L+DMY+K + + +F+++ K V SW +I G ++
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698
Query: 480 RSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +A+ F M + K P+ T + +L AC G + G A ++ + L +
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQ-MQTLYKLEPELEH 757
Query: 539 --ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++DM R GR+ A N N E D W+ LL+ + E+F K++ +
Sbjct: 758 YACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE 817
Query: 595 GN 596
N
Sbjct: 818 AN 819
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDK 463
+L C N+++G KL ++ + S + NT LI MYS C ++ VF ++ +K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEI 521
N+ W +++ G N EA+ F +++ +P++ T ++ AC + GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
H A+++G+ D F+ NA++ +Y +CG + A F+ E+++ +WN L+ G++E G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 581 ALAEEFFRKMIDS 593
A FR +++S
Sbjct: 293 LEAYRAFRSLLES 305
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 241/446 (54%), Gaps = 4/446 (0%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F + D LF WN +I Y GF +AL ++ M G PD YTFP V++ C +
Sbjct: 139 LFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMS 198
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
L G +H + G+ +++ V N+L+ MY+ CG + AR VF+ M KR +SWN MIS
Sbjct: 199 MLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMIS 258
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G+F+NG + L +F M + V+PD T+ S + + + + +LG +VH V K +
Sbjct: 259 GWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQE 318
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ V N L+ MY G +E VF+ + KDV++WT+MI+ Y + A+ M+
Sbjct: 319 KIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQ 378
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G +P+ +T+AS+LSACA L L G LH MR L S +++ LIDMY+KC +
Sbjct: 379 LDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVS 438
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACA 510
+ +VF + K + W +++ GL N + EA+ F+ M++ ++ N T S++ A A
Sbjct: 439 YSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYA 498
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN---SNERDVSAW 567
+ L +H++ +R G + L+DMY +CG + A F+ + E+D+ W
Sbjct: 499 ILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVW 558
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
++L+ GY G G A F +M+ S
Sbjct: 559 SVLIAGYGMHGHGETAVLLFNQMVHS 584
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 278/542 (51%), Gaps = 22/542 (4%)
Query: 79 ALKYLDSMQELNIC-VDEDALVNLVRLCEWKRGYDEGLYLH--SVVSKTMSHLSVRLGNA 135
AL+ DSM C D+ +++ C + G+ +H ++VS S++ V+ N+
Sbjct: 167 ALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQ--NS 224
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+M++ G +G A VF M R + SWN +I G+ + G +EAL+++ M V+P
Sbjct: 225 LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMM-DARVEP 283
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T L +CG + +L+ G +VH V + + ++V NAL+ MY +CG + A LVF
Sbjct: 284 DSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVF 343
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
++D I+W +MI+GY NG L L M+ V P+ +TL+S++SA + K
Sbjct: 344 AETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLK 403
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +H +V++ DV V LI MY +VF++ K V W ++S
Sbjct: 404 QGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLI 463
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ L +AV ++ M E + T SV+ A A L +L + LH +R+G IS I
Sbjct: 464 HNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIA 523
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ LIDMYSKC +D A ++F +IP +K++I W+ +I G ++ A++ F +M+
Sbjct: 524 VITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVH 583
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN---ALLDMYVRCGR 549
+ ++PN +T S+L AC+ G + G + + + + LPN ++D+ R GR
Sbjct: 584 SGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPS--SPLPNHYTCVVDLLGRAGR 641
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMG 602
+ A++ S +++ S W LL E G+ A AE F +S GN+ L
Sbjct: 642 LDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVA-AERLFELEPESTGNYILLAN 700
Query: 603 LF 604
++
Sbjct: 701 IY 702
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 199/386 (51%), Gaps = 8/386 (2%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVN---ALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
L + K +H H I G + ++ L Y CG + AR +FD + WNA+
Sbjct: 95 LNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAI 154
Query: 270 ISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
I Y + G + L +F M+ PD T VI A ++ +G +HG + G
Sbjct: 155 IKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSG 214
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
FS ++ V N L+ MY++ G +VF+ M + VVSW TMIS + + P++A+ +
Sbjct: 215 FSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFN 274
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M PD TI S L +C L L+LGIK+H+L + L I + N L+DMYS+C
Sbjct: 275 SMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCG 334
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+D+A VF + +K+VI+WTS+I G +N + AL M L+ + PN+VTL S+LS
Sbjct: 335 GMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLS 394
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVS 565
ACA + L GK +HA +R + D + AL+DMY +C + ++ F S +R V
Sbjct: 395 ACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTV- 453
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
WN LL+G A F+ M+
Sbjct: 454 PWNALLSGLIHNELAREAVGLFKSML 479
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 218/446 (48%), Gaps = 8/446 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL +SM + + D +V+ + C + + G+ +H +V K + +
Sbjct: 263 NGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEV 322
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ + G + A VF + ++D+ +W +I GY G AL+L M + G
Sbjct: 323 RNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAM-QLDG 381
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ T +L C + LK+GK +H V+R ++DV VV ALI MY KC + +
Sbjct: 382 VVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSF 441
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + + WNA++SG N + + LF M V+ + T +SVI A ++
Sbjct: 442 QVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILA 501
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTM 370
D K +H Y+++ GF ++V LI MY G+ + K+F + + KD++ W+ +
Sbjct: 502 DLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVL 561
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y + AV + M G P+EIT SVL AC+ G +D G+ L + +
Sbjct: 562 IAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYP 621
Query: 431 ISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S + T ++D+ + +D+A ++ +P + S +LG L +++ E
Sbjct: 622 SSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAA 681
Query: 490 KMMLNLKP----NSVTLVSILSACAR 511
+ + L+P N + L +I +A R
Sbjct: 682 ERLFELEPESTGNYILLANIYAAVGR 707
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 260/465 (55%), Gaps = 5/465 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV L A LS +V+ G + +A +F M D F WNV+I G+ G F +A+ Y RM
Sbjct: 60 SVSLTRA-LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRME 118
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ GGV+ D +T+P V++ CGG+ DL G+ VH VI+ G + D+ + N+LI MY K G +
Sbjct: 119 F-GGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCI 177
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A +VF MP RD +SWN+MISGY G+ + L F M+ + D ++ ++ A
Sbjct: 178 ESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
L G + G+E+H +++ DV V L+ MY G + E++F ++ K +V+W
Sbjct: 238 SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWN 297
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI Y + ++ + M+ G + PD IT+ ++L CA L + LG +H A+R
Sbjct: 298 AMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIR 357
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + ++++ L+DMY +C + A +F Q+ ++N+ISW ++I N + +A+
Sbjct: 358 NGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTL 417
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+ + LKP++ T+ SIL A A + +L ++IH + ++ + + F+ N+++ MY +
Sbjct: 418 FQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGK 477
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG + A F+ +DV +WN ++ YA G G ++ E F +M
Sbjct: 478 CGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM 522
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 254/521 (48%), Gaps = 14/521 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A+ + M+ + D +++ C EG +H V K+ L + +
Sbjct: 104 NGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYI 163
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ + M+ K G + A VF +M RDL SWN +I GY G +LS ++ M G
Sbjct: 164 GNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREM-QASG 222
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D ++ +L C L+ GKE+H ++R E DV V +L+ MY KCG + A
Sbjct: 223 IKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAE 282
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-VLVDPDFMTLSSVISASELV 311
+FD + + ++WNAMI GY N + + M+E + PD++T+ +++ +
Sbjct: 283 RLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQL 342
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
LG+ VHG+ I+ GF + + L+ MY G + E +F +M ++++SW MI
Sbjct: 343 EAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMI 402
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + KA+ +Q + + PD TIAS+L A A L +L ++H + L
Sbjct: 403 ASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLD 462
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++N+++ MY KC + +A E+F ++ K+VISW ++I+ ++ ++ F +M
Sbjct: 463 SNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM 522
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYV 545
+PN T VS+L +C+ G + G E + + G+ G +LD+
Sbjct: 523 REKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYG----CILDLIG 578
Query: 546 RCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAE 584
R G + A N +A W LLT +G LAE
Sbjct: 579 RTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAE 619
>gi|302802776|ref|XP_002983142.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
gi|300149295|gb|EFJ15951.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
Length = 544
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 253/499 (50%), Gaps = 7/499 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
D ++R+C + +G +HS + + LGN + M++K G L A +
Sbjct: 5 TDSATYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQRM 64
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M RD W +I Y++ G + AL L+QRM VKPD TF VL CG +
Sbjct: 65 FDEMVSRDAILWTSMISAYSERGHYKTALKLFQRM-QGESVKPDNVTFVTVLNCCGKMSA 123
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK +H + G+E D+ V AL+ MY KCG L AR VF+ + +D I+WNAM+S
Sbjct: 124 LQEGKLIHSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVFEEIQGKDIITWNAMLSV 183
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y ++ Y + L L+ R++ + P T +VI+A + GR+VH V G +
Sbjct: 184 YVQHSAYEEALELY---RKMELTPSVSTFVTVINACAGATALEDGRQVHAVVTARGLETE 240
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+V + L+ MY G+ E+ KVF + D V+W MIS Y +A+ +++M
Sbjct: 241 DAVSSALLNMYGKCGSLEDAAKVFWKRREYDDVAWAHMISFYTQWHRSKEALGLFRLMRL 300
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG D+ + LSAC L G LH +G S +++ + LI MY +C D
Sbjct: 301 EGVRVDKFAFTTTLSACNGAECLAEGRLLHAGIEESGFESDVVVRSALIHMYGRCGLYDA 360
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARI 512
A E+F +P KNV+ +++I + E L ++ + P +T++S+L ACA +
Sbjct: 361 AWELFQSVPTKNVLLSSAMIATCERHGHWRELLDVYQN--VQSVPYKLTIISVLKACAEL 418
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILL 571
L GK +H + DG + ALL MY +CG ++ A N F+ + ++ + WN LL
Sbjct: 419 QELERGKAVHESIKGKDLYQDGGIREALLGMYCKCGALEDAQNLFDRTPDKSTAFWNALL 478
Query: 572 TGYAERGQGALAEEFFRKM 590
Y ++GQ A E F +M
Sbjct: 479 DAYVKQGQLERASELFEQM 497
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 209/416 (50%), Gaps = 20/416 (4%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
K D T+ VLR C L++GK++H ++ G E D + N LI MY+KCG L A+
Sbjct: 4 KTDSATYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQR 63
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD M RD I W +MIS Y E G Y L LF M+ V PD +T +V++ +
Sbjct: 64 MFDEMVSRDAILWTSMISAYSERGHYKTALKLFQRMQGESVKPDNVTFVTVLNCCGKMSA 123
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+ +H + GF +D+ V L+ MY G+ + KVF ++ KD+++W M+S
Sbjct: 124 LQEGKLIHSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVFEEIQGKDIITWNAMLSV 183
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y ++A+E Y+ ME P T +V++ACA L+ G ++H + GL +
Sbjct: 184 YVQHSAYEEALELYRKMEL---TPSVSTFVTVINACAGATALEDGRQVHAVVTARGLETE 240
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+++ L++MY KC ++ A +VF + + + ++W +I +RS EAL FR M L
Sbjct: 241 DAVSSALLNMYGKCGSLEDAAKVFWKRREYDDVAWAHMISFYTQWHRSKEALGLFRLMRL 300
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
++ + + LSAC L G+ +HA G D + +AL+ MY RCG
Sbjct: 301 EGVRVDKFAFTTTLSACNGAECLAEGRLLHAGIEESGFESDVVVRSALIHMYGRCGLYDA 360
Query: 553 AWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
AW F S V N+LL+ + G+WR+L+ +++ Q
Sbjct: 361 AWELFQS----VPTKNVLLSS------------AMIATCERHGHWRELLDVYQNVQ 400
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 212/437 (48%), Gaps = 12/437 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + ALK MQ ++ D V ++ C EG +HS ++ + +
Sbjct: 87 GHYKTALKLFQRMQGESVKPDNVTFVTVLNCCGKMSALQEGKLIHSQLTGNGFENDLIVK 146
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A L+M+ K G L A VF ++ +D+ +WN ++ Y + ++EAL LY++M +
Sbjct: 147 TALLNMYGKCGSLTDARKVFEEIQGKDIITWNAMLSVYVQHSAYEEALELYRKM----EL 202
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P V TF V+ C G L+ G++VH V G E + V +AL+ MY KCG L A
Sbjct: 203 TPSVSTFVTVINACAGATALEDGRQVHAVVTARGLETEDAVSSALLNMYGKCGSLEDAAK 262
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + D ++W MIS Y + + L LF +MR V D ++ +SA G
Sbjct: 263 VFWKRREYDDVAWAHMISFYTQWHRSKEALGLFRLMRLEGVRVDKFAFTTTLSACN--GA 320
Query: 314 EKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
E L GR +H + + GF DV V + LI MY G + ++F + +K+V+ + MI
Sbjct: 321 ECLAEGRLLHAGIEESGFESDVVVRSALIHMYGRCGLYDAAWELFQSVPTKNVLLSSAMI 380
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ E + ++ YQ ++ S+P ++TI SVL ACA L L+ G +H+ L
Sbjct: 381 ATCERHGHWRELLDVYQNVQ---SVPYKLTIISVLKACAELQELERGKAVHESIKGKDLY 437
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I L+ MY KC ++ A +F + PDK+ W +++ + A F +M
Sbjct: 438 QDGGIREALLGMYCKCGALEDAQNLFDRTPDKSTAFWNALLDAYVKQGQLERASELFEQM 497
Query: 492 MLN-LKPNSVTLVSILS 507
N ++ N +T+ + S
Sbjct: 498 QANDVEANEITVACVSS 514
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 38/341 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ + + E+AL+ M EL V V ++ C ++G +H+VV+
Sbjct: 178 NAMLSVYVQHSAYEEALELYRKM-ELTPSVS--TFVTVINACAGATALEDGRQVHAVVTA 234
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +A L+M+ K G L A VF K + D +W +I Y + EAL L
Sbjct: 235 RGLETEDAVSSALLNMYGKCGSLEDAAKVFWKRREYDDVAWAHMISFYTQWHRSKEALGL 294
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ + GV+ D + F L C G L G+ +H + G+E+DV V +ALI MY
Sbjct: 295 F-RLMRLEGVRVDKFAFTTTLSACNGAECLAEGRLLHAGIEESGFESDVVVRSALIHMYG 353
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG A +F +P ++ + +AMI+ +G + + L ++ ++ V P +T+ S
Sbjct: 354 RCGLYDAAWELFQSVPTKNVLLSSAMIATCERHGHWRELLDVYQNVQSV---PYKLTIIS 410
Query: 304 VISASELVGDEKLGREVH-------------------GYVIKMGFSDD------------ 332
V+ A + + + G+ VH G K G +D
Sbjct: 411 VLKACAELQELERGKAVHESIKGKDLYQDGGIREALLGMYCKCGALEDAQNLFDRTPDKS 470
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ N L+ Y+ G E ++F +M++ DV + ++C
Sbjct: 471 TAFWNALLDAYVKQGQLERASELFEQMQANDVEANEITVAC 511
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL M+ + VD+ A + C EG LH+ + ++ V + +A
Sbjct: 289 KEALGLFRLMRLEGVRVDKFAFTTTLSACNGAECLAEGRLLHAGIEESGFESDVVVRSAL 348
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ + G AW +F + +++ + +I + G + E L +YQ + V P
Sbjct: 349 IHMYGRCGLYDAAWELFQSVPTKNVLLSSAMIATCERHGHWRELLDVYQNVQSV----PY 404
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL+ C + +L+RGK VH + D + AL+ MY KCG L A+ +FD
Sbjct: 405 KLTIISVLKACAELQELERGKAVHESIKGKDLYQDGGIREALLGMYCKCGALEDAQNLFD 464
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
P + WNA++ Y + G+ + LF M+ V+ + +T++ V S E
Sbjct: 465 RTPDKSTAFWNALLDAYVKQGQLERASELFEQMQANDVEANEITVACVSSLRE 517
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 252/468 (53%), Gaps = 12/468 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
++ L NA ++M+ K G + A VF + +RD SW +I YA GF DEAL LYQ+M
Sbjct: 180 NLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMD 239
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G++PD TF L C + D GK +H ++ E+D V +ALI MY +CGD+
Sbjct: 240 -ADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDF-VGSALINMYARCGDV 294
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR F+ + + + W ++++ Y + Y + L L+ M V D +T + + A
Sbjct: 295 SSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGAC 354
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSW 367
+G K G+ +H V + GF V V L+ MY G + VF+R+ K +V W
Sbjct: 355 ASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCW 413
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MIS Y + +A+E Y M AEG+ P+E T ++VL+AC+ G+L+ G+K+H
Sbjct: 414 TAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVEN 473
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ L S + + N L+ MY+KC ++ A F K+++SW ++I + EAL
Sbjct: 474 SELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDL 533
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL--PNALLDMY 544
++ M + P+ VT+ S LSACA G+L G+EIH+ L+ +F L AL++MY
Sbjct: 534 YQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLK-NQSFRSSLMVQTALVNMY 592
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RCGR++ A + F +RDV +W + + YA++G + + +M+
Sbjct: 593 GRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMV 640
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 236/452 (52%), Gaps = 11/452 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
NG ++AL M I D + + C +G +H+ +VS M S
Sbjct: 225 NGFCDEALDLYQQMDADGIQPDSITFTSALLACT---KLVDGKAIHARIVSSNME--SDF 279
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A ++M+ + GD+ A F K+ ++ + W L+ Y + + EAL LY RM
Sbjct: 280 VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDH-E 338
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV D T+ L C + LK GK +H V G+++ V V AL+TMY KCG+L A
Sbjct: 339 GVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAA 397
Query: 252 RLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
R VF+ + KR+ W AMIS Y + G + L L+ M P+ T S+V++A
Sbjct: 398 RAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSS 457
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
GD + G ++HG+V + +V+V N L+ MY G+ E + F KD+VSW M
Sbjct: 458 SGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAM 517
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-G 429
I Y L +A++ YQ M ++G +PDE+TIAS LSACA G+L LG ++H ++
Sbjct: 518 IGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQS 577
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S +++ L++MY +C ++ A +F + ++V+SWT++ + + L +
Sbjct: 578 FRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYL 637
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
+M+L+ ++PN +T SIL C+ G L G E
Sbjct: 638 EMVLHGIRPNEITFTSILVGCSHAGLLARGVE 669
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 213/396 (53%), Gaps = 13/396 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ CG + L GK VH H++R G+ + + N LI MY CG++ AR F
Sbjct: 48 LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107
Query: 263 RIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
++ +N M+S Y +NG + + L L+ M E +PD +T V+ + VG + RE+H
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167
Query: 322 GYVIKMG--FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+I+ D++S+ N L+ MY G+ EE KVF ++++D VSWT+MIS Y +
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
D+A++ YQ M+A+G PD IT S L AC L + G +H + + + S + +
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMES-DFVGSA 283
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPN 498
LI+MY++C + A + F +I +K+V+ WTS++ EAL + +M + +
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-ALLDMYVRCGRMKPAWNQF 557
VT V+ L ACA +GAL GK IH+ G F + + ALL MY +CG + A F
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECG--FQSLVVHTALLTMYAKCGELDAARAVF 401
Query: 558 N--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
N +R+V W +++ YA+ G A E + +M+
Sbjct: 402 NRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMV 437
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 256/462 (55%), Gaps = 6/462 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S++ FG L A VF + D SW V+I Y F + + Y RM V +
Sbjct: 43 LVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRM-RVCLKEC 101
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D F VL+ C + G++VH +++FG D V L+ MY KCG++ +R VF
Sbjct: 102 DNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVF 160
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D R+ SW++MI+GY +N GL+LF MRE L++ + +TL ++ A + +G
Sbjct: 161 DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALH 220
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HGY+IK G + L+ +Y G + VF + D+VSWT MI Y
Sbjct: 221 QGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYT 280
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P++A++ + E +P+++TIASV S+C+ L NL+LG +H L+++ G I
Sbjct: 281 QNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRD-PI 339
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ N+L+D Y+KC+ A VF I D++V++W SII N ++EAL F +M M +
Sbjct: 340 VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGS 399
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPA 553
+ P++VTLVS+LSACA + AL G HA+A++ G ++ + ++ ALL Y +CG + A
Sbjct: 400 VLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESA 459
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F+ +++ W+ +++GY +G G + F M+ ++
Sbjct: 460 RVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAE 501
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 266/529 (50%), Gaps = 14/529 (2%)
Query: 72 LNGSLEQALKYLDSMQELNICVDE-DALV--NLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
LN + + + M+ +C+ E D +V ++++ C R +DEG +H + K +
Sbjct: 80 LNSEFRDIVGFYNRMR---VCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPD 136
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S + M+ K G++ + VF + DR++FSW+ +I GY + + L L+ RM
Sbjct: 137 SFVF-TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRM- 194
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
++ + T ++ C + L +GK +H ++I+ G E +V AL+ +Y KCG +
Sbjct: 195 REELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVV 254
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD + D +SW AMI GY +NG + L LF+ +V V P+ +T++SV S+
Sbjct: 255 RDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSC 314
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + LGR +HG IK+G D + V N L+ Y + VF + +DVV+W
Sbjct: 315 SQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWN 373
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++IS + + +A+E + M +PD +T+ SVLSACA L L +G H A++
Sbjct: 374 SIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKR 433
Query: 429 GLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL+S + + L+ Y+KC + A +F + K+ ++W+++I G + +L
Sbjct: 434 GLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSI 493
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYV 545
F M+ LKPN SILSAC+ G + G + + + ++D+
Sbjct: 494 FGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLA 553
Query: 546 RCGRMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR+K A + Q + DVS + L G + L E ++M++
Sbjct: 554 RAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLE 602
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 202/377 (53%), Gaps = 8/377 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
E+H +++ G D+ L+++Y G L ARLVFD +P D +SW +I YF N
Sbjct: 23 EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
E+ + + MR L + D + S V+ A + GR+VH ++K G + D V
Sbjct: 83 EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFT 141
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G E VF ++V SW++MI+ Y + L + + M E
Sbjct: 142 GLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEA 201
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTG--LISYIIIANTLIDMYSKCKCIDKALE 455
++IT+ ++ AC LG L G LH ++ G L SY++ A L+D+Y+KC + A
Sbjct: 202 NQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTA--LLDLYAKCGVVRDARS 259
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGA 514
VF ++ +++SWT++I+G N EAL +F +K + + PN VT+ S+ S+C+++
Sbjct: 260 VFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLN 319
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L G+ IH ++++G + D + N+L+D Y +C + A F + ++RDV AWN +++
Sbjct: 320 LNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISA 378
Query: 574 YAERGQGALAEEFFRKM 590
+++ G A E F +M
Sbjct: 379 FSQNGSAYEALELFHQM 395
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 6/428 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L + M+E I ++ L LV C+ +G +LH + K L L
Sbjct: 181 NNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYL 240
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L ++ K G + A VF ++ D+ SW +I GY + G +EAL L+ + V
Sbjct: 241 VTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQV-A 299
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ T V +C + +L G+ +H I+ G D V N+L+ Y KC AR
Sbjct: 300 VLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDAR 358
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + RD ++WN++IS + +NG + L LF MR V PD +TL SV+SA +
Sbjct: 359 YVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLN 418
Query: 313 DEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++G H Y +K G S +V V L+ Y G+ E +F M+ K V+W+ MI
Sbjct: 419 ALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMI 478
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GL 430
S Y ++ + M P+E S+LSAC+ G + G +L + + L
Sbjct: 479 SGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNL 538
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFR 489
+ ++D+ ++ + +AL+ ++P + +S + + + G L++R F+
Sbjct: 539 VPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSR-FDLGELAI 597
Query: 490 KMMLNLKP 497
K ML L P
Sbjct: 598 KRMLELHP 605
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
N++ +++H + GL + + L+ +Y +D A VF IP + +SW II
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIR 76
Query: 474 GLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
LN+ + + F+ +M + LK ++V +L AC+ G+++H ++ G
Sbjct: 77 WYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNP- 135
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D F+ L+DMY +CG ++ + + F+ N +R+V +W+ ++ GY + F +M
Sbjct: 136 DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRM 194
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 263/499 (52%), Gaps = 10/499 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
++L+ C + E +H K S+ + + +++ + A +F ++ +
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ WN +I YA G FD A+ LY M +G V+P+ YT+P VL+ C G+ ++ G E
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H H FG E+DV V AL+ Y KCG LV A+ +F M RD ++WNAMI+G G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSV 335
+ L + M+E + P+ T+ V+ VG+ K G+ +HGY ++ F + V V
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPT---VGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY K+F M ++ VSW+ MI Y S +A+E + M + +
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA 307
Query: 396 M-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
M P +T+ SVL ACA L +L G KLH ++ G + I++ NTL+ MY+KC ID A+
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
F + K+ +S+++I+ G N + AL FR M L+ + P+ T++ +L AC+ +
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLT 572
AL G H + + G A D + NAL+DMY +CG++ A FN +R D+ +WN ++
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 487
Query: 573 GYAERGQGALAEEFFRKMI 591
GY G G A F ++
Sbjct: 488 GYGIHGLGMEALGLFHDLL 506
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 300/637 (47%), Gaps = 57/637 (8%)
Query: 13 PLRQNLRNPKTRIPETSFYFKPKT------RHF--SSKNAQS------VQVLNTQNTSSI 58
PLR ++N + E K T +HF ++ NA S ++ + N +
Sbjct: 2 PLRXEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVL 61
Query: 59 ATK------NP-----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
A + NP N + NG + A+ SM L + ++ +++ C
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
++G+ +HS V + A + + K G L A +F M RD+ +WN +
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAM 181
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I G + G D+A+ L +M G+ P+ T VL T G L GK +H + +R
Sbjct: 182 IAGCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF- 286
++ V V L+ MY KC L+ AR +FD M R+ +SW+AMI GY + + L LF
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFD 300
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ + +DP +TL SV+ A + D GR++H Y+IK+G D+ + N L+ MY
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKC 360
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G ++ + F M KD VS++ ++S + A+ ++MM+ G PD T+ VL
Sbjct: 361 GVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC+ L L G H + G + +I N LIDMYSKC I A EVF+++ +++
Sbjct: 421 PACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV 480
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++I+G ++ EAL F ++ L LKP+ +T + +LS+C+ G +M G+
Sbjct: 481 SWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR------ 534
Query: 526 LRIGVAFDG------FLPN-----ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILL 571
+ FD +P ++D+ R G + A + F N E DV W+ LL
Sbjct: 535 ----LWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA-HHFIRNMPFEPDVRIWSALL 589
Query: 572 TGYAERGQGALAEEFFRKM----IDSKGNWRKLMGLF 604
+ L EE +K+ +S GN+ L ++
Sbjct: 590 SACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 626
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 7/454 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G + A++ + MQE IC + +V ++ + G LH +
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR 238
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G L M+ K L +A +F M R+ SW+ +IGGY + EAL L
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALEL 298
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + P T VLR C + DL RG+++H ++I+ G D+ + N L++MY
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A FD M +D +S++A++SG +NG L +F MM+ +DPD T+
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + G HGY+I GF+ D +CN LI MY G +VF+RM+ D
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLH 422
+VSW MI Y L +A+ + + A G PD+IT +LS+C+ G + G +
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
++ ++ + ++D+ + ID+A +P + +V W++++ R+ +++
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRI-HKN 597
Query: 482 FEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
E K + +L P S V L +I SA R
Sbjct: 598 IELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631
>gi|125545042|gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group]
Length = 885
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 273/500 (54%), Gaps = 12/500 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +AL + +R C G D +H+V +++ L + N +S + +F ++ A VF
Sbjct: 351 DAEALASSLRDCG---GADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKVF 407
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPD 212
+M +R + SW ++ Y K G + E + L+ M VG GV+ + TF C+L++CG D
Sbjct: 408 DEMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDM--VGSGVQGNSLTFVCLLKSCGERCD 465
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
K G++VH +++ G+ ++V V +A+ Y +CGD+ A +FD M RD ISW MI+
Sbjct: 466 AKLGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITA 524
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y ++G + L +F M P+ T+ SV+ A + G+++H V+K + +D
Sbjct: 525 YVQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKND 584
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + + L+ MY G + + VF M ++ ++WT+MIS Y S +KA+ ++ M+
Sbjct: 585 IHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAIFLFRKMKM 644
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+ +TI +LSAC L +L LG +LH ++ + + I +TL+ Y KC
Sbjct: 645 RRVFVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLVWFYCKCGEYTY 704
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A + +PD++ ISWT++I G + EAL M+ + +KPN+ T S L ACA+
Sbjct: 705 AARILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAK 764
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ AL G++IH + + F+ ++L+DMY+RCG++ A F++ E ++ W ++
Sbjct: 765 LEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVI 824
Query: 571 LTGYAERGQGALAEEFFRKM 590
+TG+A+ G L EE + M
Sbjct: 825 ITGFAQNG---LCEEALKYM 841
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 209/387 (54%), Gaps = 6/387 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + +A + + GD+ A +F KM RD+ SW +I Y + G +AL ++ M
Sbjct: 483 NVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAYVQHGHGGQALRMFSEMV 542
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G +P+ +T VL+ C ++ GK++H V++ Y+ D+ + +AL+TMY +CG++
Sbjct: 543 -SEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEV 601
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVIS 306
A+ VFD MP+R+ I+W +MISGY ++G K + LF + MR V V+ +T+ ++S
Sbjct: 602 FDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAIFLFRKMKMRRVFVNN--LTIVGLLS 659
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + LG+E+H +IK D++ + + L+ Y G ++ M +D +S
Sbjct: 660 ACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAIS 719
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT +IS Y +A+++ M +G P+ T +S L ACA L L G K+H
Sbjct: 720 WTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVN 779
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+T S + + ++LIDMY +C +D+A VF +P+ N+++W II G N EAL
Sbjct: 780 KTQDFSNVFVGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVIITGFAQNGLCEEALK 839
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARI 512
+ M + + L ++L++C +
Sbjct: 840 YMYLMQQEGHEVDDFVLSTVLTSCGDL 866
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 206/399 (51%), Gaps = 6/399 (1%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD LR CGG ++R VH +R V N LI+ Y + ++ AR V
Sbjct: 350 PDAEALASSLRDCGGADGVRR---VHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKV 406
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD MP+R +SW AM++ Y + G Y + + LF M V + +T ++ + D
Sbjct: 407 FDEMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDA 466
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
KLG++VH ++K G+S +V V + + Y G+ +F +M S+DV+SWTTMI+ Y
Sbjct: 467 KLGQQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAY 525
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A+ + M +EG P+E T+ SVL ACA + G +LH ++ + I
Sbjct: 526 VQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDI 585
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
I + L+ MY++C + A VF +P +N I+WTS+I G + +A+ FRKM M
Sbjct: 586 HIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAIFLFRKMKMR 645
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ N++T+V +LSAC + +L GKE+HA ++ + + + + L+ Y +CG A
Sbjct: 646 RVFVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLVWFYCKCGEYTYA 705
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +RD +W L++GY G A + M+
Sbjct: 706 ARILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDML 744
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 179/340 (52%), Gaps = 1/340 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G QAL+ M +E + ++++ C ++ G LH V K M + +
Sbjct: 528 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 587
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF M R+ +W +I GYA++G ++A+ L+++M +
Sbjct: 588 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAIFLFRKMK-MRR 646
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + L GKE+H +I+ E ++ + + L+ Y KCG+ A
Sbjct: 647 VFVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLVWFYCKCGEYTYAA 706
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ISW A+ISGY G ++ L M V P+ T SS + A +
Sbjct: 707 RILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLE 766
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR++HG+V K +V V + LI MY+ G +E +VF M ++V+W +I+
Sbjct: 767 ALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVIIT 826
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ + L ++A++ +M+ EG D+ +++VL++C L
Sbjct: 827 GFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 866
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
Q E S+PD +AS L C G D ++H +A+R+ +AN LI Y++
Sbjct: 341 QEGRGESSLPDAEALASSLRDC---GGADGVRRVHAVAVRSLDSLGTFVANNLISAYARF 397
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+ A +VF ++P+++V+SWT+++ L+L + +FF + ++ NS+T V +L
Sbjct: 398 DEVSDARKVFDEMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLL 457
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
+C G+++H ++ G + + + +A+ Y +CG + A F+ RDV
Sbjct: 458 KSCGERCDAKLGQQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMASRDVI 516
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
+W ++T Y + G G A F +M+
Sbjct: 517 SWTTMITAYVQHGHGGQALRMFSEMV 542
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/519 (30%), Positives = 269/519 (51%), Gaps = 9/519 (1%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K N L L G L++A +L M + ++ V + L C R +G +H
Sbjct: 53 KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ +T+ + S + N L M+ G VF +M ++L SW ++I YAK G ++A
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA 172
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+ M G++P+ + +L++C G L+ GK++H HVIR A++ V A+
Sbjct: 173 IRLFSDM-QASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICN 231
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MYV+CG L A+LVFDGM ++ ++W ++ GY + + L LF M V+ D
Sbjct: 232 MYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFV 291
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S V+ + D +GR++H +++K+G +VSV PL+ Y+ G+ E + F R+
Sbjct: 292 FSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRIS 351
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ VSW+ +IS + S + ++ + + +EG + + SV ACA NL++G +
Sbjct: 352 EPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ 411
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
H A++ GL+SY+ + ++ MYSKC +D A F I + + ++WT+II G +
Sbjct: 412 AHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGN 471
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFL 536
+ EAL FFR+M ++PN+VT +++L+AC+ G + K+ R + D +
Sbjct: 472 AAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY- 530
Query: 537 PNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
+ ++D Y R G ++ A N E D +W LL G
Sbjct: 531 -DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 211/428 (49%), Gaps = 3/428 (0%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K G EA + M V +++ C+ CG + L G+ +H +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMD-DADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
R + N L+ MY CG + + VFD M ++ +SW +IS Y +NGE K +
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M+ + P+ S++ + +LG+++H +VI+ + +++V + MY+
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV 234
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E + VF M++++ V+WT ++ Y + + A+E + M EG DE +
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL C L + D+G ++H ++ G S + + L+D Y KC I+ A F +I + N
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW+++I G + R + + F + + NS S+ ACA L G + H
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
A++ G+ + +A++ MY +CGR+ A F S +E D AW +++GYA G A
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474
Query: 583 AEEFFRKM 590
A FFR+M
Sbjct: 475 ALGFFRRM 482
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 246/464 (53%), Gaps = 12/464 (2%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
LS K G +G+A ++F + WN +I G A+ + AL+L++ M +G V+
Sbjct: 125 LLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLG-VRH 183
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D YTF VL C + L G+EVH VI+ G+ V+NAL+TMY G + A VF
Sbjct: 184 DKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVF 242
Query: 256 DGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ D I++N MI G G + L++F M+E + P +T SV+S+
Sbjct: 243 EEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSS---CSS 299
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
++ +VH IKMGF V N + MY S GN VF R+E KD++SW +I
Sbjct: 300 ARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMN 359
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y A+ + M+ G PDE TI S+L++ +L++ L + GL S
Sbjct: 360 YAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE---SLEIVKMFQALVSKNGLNSK 416
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMM 492
I ++N L+ +SK I++A +VF+ + N+ISW +II G N + + L F+ +M
Sbjct: 417 IEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLM 476
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
LKPN+ TL +LS CA I AL GK+IH + LR GV L NAL+ MY +CG +
Sbjct: 477 STLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDW 536
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+ FN N RD+ +WN +++ YA+ G+G A FF+ M DS G
Sbjct: 537 SLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGG 580
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 261/517 (50%), Gaps = 23/517 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E AL M +L + D+ +++ LC + D G +H++V KT + +
Sbjct: 163 NKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLEL-LDFGREVHTLVIKTGFLVRASV 221
Query: 133 GNAFLSMFVKFGDLGHAWYVF--GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
NA L+M+ G + A+ VF + D ++NV+IGG A G +EAL +++ M
Sbjct: 222 INALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEM-QE 280
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
++P TF V+ +C + +VH I+ G+EA V NA +TMY CG+L
Sbjct: 281 ACLRPTELTFVSVMSSCSSA---RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHA 337
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+VFD + ++D ISWN +I Y + Y ++ F+ M+ ++PD T+ S++++SE
Sbjct: 338 VHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSES 397
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ ++ + V K G + + V N L+ + G E+ +VF+ M S +++SW T+
Sbjct: 398 L---EIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTI 454
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + + +E + + P+ T++ VLS CA + L G ++H +R+G+
Sbjct: 455 ISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGV 514
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + N LI MY+KC +D +L +F+ + ++++SW ++I + + EA+ FF+
Sbjct: 515 FSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKA 574
Query: 491 MMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDM 543
M + +KP+ T ++LSAC+ G + G I V GF P A ++D+
Sbjct: 575 MQDSGGVKPDQATFTAVLSACSHAGLVDDGTRI----FNSMVNDYGFEPGADHLSCIVDL 630
Query: 544 YVRCGRMKPAWNQFNSNERDV--SAWNILLTGYAERG 578
R G ++ A NS + S W L + A G
Sbjct: 631 LGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHG 667
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 15/411 (3%)
Query: 19 RNPKTRIPETSFYFKPK------TRHFSS-KNAQSVQVLNTQNTSSIATKNPNSRLNELC 71
R T + +T F + T +F+S K A + +V ++ N + L
Sbjct: 204 REVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLA 263
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
G E+AL MQE + E V+++ C R + +H+ K
Sbjct: 264 SVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSHQ---VHAQAIKMGFEACTP 320
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA ++M+ G+L VF ++ ++DL SWN++I YA+ F+ A+ + +M
Sbjct: 321 VSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQM-QRA 379
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++PD +T +L + + +K + + V + G + ++V NAL++ + K G + +A
Sbjct: 380 GIEPDEFTIGSLLASSESLEIVKMFQAL---VSKNGLNSKIEVSNALVSAFSKHGQIEQA 436
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M + ISWN +ISG+ NG ++GL F + + P+ TLS V+S +
Sbjct: 437 YQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASI 496
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++HGY+++ G S+ N LI MY G+ + ++F+ M +D+VSW MI
Sbjct: 497 SALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMI 556
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKL 421
S Y +AV ++ M+ G + PD+ T +VLSAC+ G +D G ++
Sbjct: 557 SAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRI 607
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 222/479 (46%), Gaps = 51/479 (10%)
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
K L N L+ ++ ++ L+ ++ +KPD +T L C +
Sbjct: 11 KNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAA 70
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM---------------- 258
G ++H + I+ G +A V N L++ Y K DLV + VF+ +
Sbjct: 71 SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 130
Query: 259 ---------------PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
P+ + WNA+I+G EN L LF M ++ V D T +S
Sbjct: 131 KLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 190
Query: 304 VIS--ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
V+S + EL+ GREVH VIK GF SV N L+ MY + G + +VF ES
Sbjct: 191 VLSLCSLELL---DFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAES 247
Query: 362 --KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
D +++ MI ++A+ ++ M+ P E+T SV+S+C+ + +
Sbjct: 248 TVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS---SARVSH 304
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H A++ G + ++N + MYS C + VF ++ +K++ISW II+ N
Sbjct: 305 QVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGN 364
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
A++ F +M ++P+ T+ S+L++ +L K A + G+ + N
Sbjct: 365 FYRLAILAFLQMQRAGIEPDEFTIGSLLASSE---SLEIVKMFQALVSKNGLNSKIEVSN 421
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG---QGALAEEFFRKMIDS 593
AL+ + + G+++ A+ FN+ + ++ +WN +++G+ G QG E+F+ ++ +
Sbjct: 422 ALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQG--LEQFYELLMST 478
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 286/547 (52%), Gaps = 9/547 (1%)
Query: 52 TQNTSSIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK 108
T + + I K+P NS + + + L M+ L + + L +++ C +
Sbjct: 7 TLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 66
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ G +H + T VR+G A + + K G + A VF M DRD+ WN ++
Sbjct: 67 NAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV 126
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG- 227
GY G ++EA+ L + M ++P+ T +L C G +L+ G+ VH + +R G
Sbjct: 127 YGYVGWGCYEEAMLLVREM-GRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM 185
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++++ V ALI Y++ D+ L+FD M R+ +SWNAMISGY++ G+Y K L LF+
Sbjct: 186 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 244
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V D +T+ + A +G KLG+++H IK F +D+ + N L+ MY + G
Sbjct: 245 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 304
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E ++F + ++D W +MIS Y ++A++ + M++EG DE T+ +LS
Sbjct: 305 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 364
Query: 408 ACACLGN-LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
C L + L G LH +++G+ + N L+ MY++ C++ ++F ++ ++I
Sbjct: 365 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 424
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++IL L N +A F +M + +KPNS T++SIL+AC + L G+ IH +
Sbjct: 425 SWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYV 484
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
++ + + L AL DMY+ CG A + F +RD+ +WN ++ Y + Q A
Sbjct: 485 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKAL 544
Query: 585 EFFRKMI 591
F +MI
Sbjct: 545 LLFHRMI 551
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 273/524 (52%), Gaps = 7/524 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT-MSHLSVRL 132
G E+A+ + M N+ + +V L+ CE G +H + M + +
Sbjct: 133 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV 192
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + +++F D+ +F M R++ SWN +I GY G + +AL L+ +M V
Sbjct: 193 ATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDE 250
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VK D T ++ C + LK GK++H I+F + D+ ++NAL+ MY G L +
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +P RD WN+MIS Y G + + + LFI M+ V D T+ ++S E +
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370
Query: 313 DEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
L G+ +H +VIK G D S+ N L+ MY E +K+F RM+ D++SW TMI
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ L +A E ++ M P+ TI S+L+AC + LD G +H M+ +
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 490
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ L DMY C A ++F PD+++ISW ++I NN++ +AL+ F +M
Sbjct: 491 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM 550
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG--VAFDGFLPNALLDMYVRCGR 549
+ +PNSVT++++LS+ + L G+ +HA+ R G + D L NA + MY RCG
Sbjct: 551 ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGS 610
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ A N F + +R++ +WN ++ GY G+G+ A F +M++
Sbjct: 611 LQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE 654
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 231/464 (49%), Gaps = 9/464 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+M+ G L + +F + +RD WN +I YA G +EA+ L+ RM GV
Sbjct: 294 NALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM-QSEGV 352
Query: 194 KPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K D T +L C + L +GK +H HVI+ G D + NAL++MY + + +
Sbjct: 353 KKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ 412
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M D ISWN MI N + LF MRE + P+ T+ S+++A E V
Sbjct: 413 KIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVT 472
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +HGYV+K + + L MY++ G+ +F +D++SW MI+
Sbjct: 473 CLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIA 532
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG--L 430
Y + KA+ + M +E P+ +TI +VLS+ L L G LH R G L
Sbjct: 533 SYVKNNQAHKALLLFHRMISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSL 591
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +AN I MY++C + A +F +P +N+ISW ++I G +N R +A++ F +
Sbjct: 592 GLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQ 651
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + +PN VT VS+LSAC+ G + G ++ H+ V + + ++D+ R G
Sbjct: 652 MLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGG 711
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A +S E D S W LL+ A+ F K+
Sbjct: 712 CIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 225/433 (51%), Gaps = 7/433 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVS 122
NS ++ G E+A+ MQ + DE +V ++ +CE G +G LH+ V
Sbjct: 325 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 384
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ + LGNA LSM+ + + +F +M D+ SWN +I A+ +A
Sbjct: 385 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 444
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L++RM +KP+ YT +L C V L G+ +H +V++ E + + AL MY
Sbjct: 445 LFERMR-ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 503
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ CGD AR +F+G P RD ISWNAMI+ Y +N + K L+LF M +P+ +T+
Sbjct: 504 MNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISE-AEPNSVTII 562
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+V+S+ + G+ +H YV + GFS D+S+ N I MY G+ + E +F +
Sbjct: 563 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++++SW MI+ Y + A+ + M +G P+ +T SVLSAC+ G +++G++
Sbjct: 623 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682
Query: 421 L-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L H + + ++ + ++D+ ++ CID+A E +P + + W +++ R
Sbjct: 683 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 742
Query: 479 NRSFEALIFFRKM 491
+ + +A F K+
Sbjct: 743 SDAKQAKTIFEKL 755
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 229/456 (50%), Gaps = 8/456 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+D WN +I A LS Y +M +G V P+ T P VL+ C ++RGK
Sbjct: 16 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLG-VLPNNTTLPLVLKACAAQNAVERGKS 74
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + DV V A++ Y KCG + AR VFD M RD + WNAM+ GY G
Sbjct: 75 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGC 134
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCN 337
Y + ++L M + P+ T+ +++ A E + +LGR VHGY ++ G F + V
Sbjct: 135 YEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVAT 194
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI YL F R +F M +++VSW MIS Y KA+E + M +
Sbjct: 195 ALIGFYLRFDMRVL-PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKF 253
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D +T+ + ACA LG+L LG ++HQLA++ + + I N L++MYS ++ + ++F
Sbjct: 254 DCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 313
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGA-L 515
+P+++ W S+I EA+ +F R +K + T+V +LS C + + L
Sbjct: 314 ESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGL 373
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGY 574
+ GK +HAH ++ G+ D L NALL MY ++ F+ + D+ +WN ++
Sbjct: 374 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILAL 433
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A A A E F +M +S K N ++ + C+
Sbjct: 434 ARNTLRAQACELFERMRESEIKPNSYTIISILAACE 469
>gi|255562850|ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538315|gb|EEF39922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 556
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 254/478 (53%), Gaps = 4/478 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L VK G L A +F +M RD SW +I GY A EAL+L+ +M+ V G+
Sbjct: 52 NSKLKALVKTGCLQDARQMFDEMPHRDEISWTTIISGYVNAIDTTEALTLFSKMWVVPGL 111
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + L+ CG + G+ +H + ++ + V V +AL+ MY+K + +
Sbjct: 112 RMDPFILSLALKICGLSLNESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQGCQ 171
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F MP R+ +SW A+I+G+ G +GL+ F M V D T + + A +G
Sbjct: 172 IFHAMPIRNVVSWTAIITGFVHAGYSKEGLVYFSQMWRSKVVCDSYTFAIALKACANLGA 231
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H +K V N L MY G + G ++F +M ++VVSWT +I+
Sbjct: 232 LDHGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITT 291
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y S + A+ + M+ G P++ T A+V+S CA LG + G +LH + GL+++
Sbjct: 292 YTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTF 351
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN++I +YSKC + A VF ++ ++V+SW++II G + EA + +M
Sbjct: 352 LSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMRR 411
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
KPN +TL S+LS C + L GK++HAHAL +G+ + +AL++MY +CG +K
Sbjct: 412 EGPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKE 471
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A F+ E D+ +W ++ GYAE G A + F K+ I K + +G+ C
Sbjct: 472 ASKIFDEAENNDIVSWTAMINGYAEHGCRQEAIDLFEKIPRIGLKPDPVTFIGVLTAC 529
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 224/404 (55%), Gaps = 4/404 (0%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y E L+ +SV S + SV +G+A + M++KF + +F M R++ SW +I G
Sbjct: 133 YGESLHGYSVKSDFVD--SVFVGSALVDMYMKFDKIQQGCQIFHAMPIRNVVSWTAIITG 190
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ AG+ E L + +M W V D YTF L+ C + L G+++H ++ EA
Sbjct: 191 FVHAGYSKEGLVYFSQM-WRSKVVCDSYTFAIALKACANLGALDHGRQIHCQALKRSLEA 249
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
V N L TMY KCG L +F+ M R+ +SW +I+ Y ++G+ L FI M+
Sbjct: 250 SSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQ 309
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
E+ V P+ T ++VIS +G + G ++HG+++ +G +SV N +I +Y G +
Sbjct: 310 EIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLK 369
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
VF + +DVVSW+T+I+ Y ++A E M EG P+E+T+ASVLS C
Sbjct: 370 SASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMRREGPKPNELTLASVLSVCG 429
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L+ G +LH A+ GL +I + LI+MYSKC I +A ++F + + +++SWT+
Sbjct: 430 NMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKEASKIFDEAENNDIVSWTA 489
Query: 471 IILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
+I G + EA+ F K+ + LKP+ VT + +L+AC+ G
Sbjct: 490 MINGYAEHGCRQEAIDLFEKIPRIGLKPDPVTFIGVLTACSHAG 533
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 192/361 (53%), Gaps = 7/361 (1%)
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-- 292
+N+ + VK G L AR +FD MP RD ISW +ISGY + + L LF M V
Sbjct: 51 INSKLKALVKTGCLQDARQMFDEMPHRDEISWTTIISGYVNAIDTTEALTLFSKMWVVPG 110
Query: 293 -LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+DP ++L+ I L +E G +HGY +K F D V V + L+ MY+ F ++
Sbjct: 111 LRMDPFILSLALKICGLSL--NESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQ 168
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
G ++F M ++VVSWT +I+ + + + + + M + D T A L ACA
Sbjct: 169 GCQIFHAMPIRNVVSWTAIITGFVHAGYSKEGLVYFSQMWRSKVVCDSYTFAIALKACAN 228
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG LD G ++H A++ L + +ANTL MY+KC +D +F ++ +NV+SWT I
Sbjct: 229 LGALDHGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMI 288
Query: 472 ILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I + + AL F R + + PN T +++S CA +G G+++H H L +G+
Sbjct: 289 ITTYTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGL 348
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ N+++ +Y +CG++K A F RDV +W+ ++ GY++ G A E+ +
Sbjct: 349 MTFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSR 408
Query: 590 M 590
M
Sbjct: 409 M 409
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 134/261 (51%), Gaps = 5/261 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSV 130
+G E AL+ MQE+ + ++ ++ C K + E L+ H + M+ LSV
Sbjct: 295 SGQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGLMTFLSV 354
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ ++++ K G L A VF ++ RD+ SW+ +I GY++ G +EA RM
Sbjct: 355 --ANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRMR-R 411
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G KP+ T VL CG + L++GK++H H + G E + +ALI MY KCG +
Sbjct: 412 EGPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSIKE 471
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +FD D +SW AMI+GY E+G + + LF + + + PD +T V++A
Sbjct: 472 ASKIFDEAENNDIVSWTAMINGYAEHGCRQEAIDLFEKIPRIGLKPDPVTFIGVLTACSH 531
Query: 311 VGDEKLGREVHGYVIKMGFSD 331
G LG + K+ ++D
Sbjct: 532 AGLVDLGFHYFNSMSKIVYND 552
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 260/479 (54%), Gaps = 10/479 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV----K 194
++ ++ + HA +F + R ++ WN L+ Y G + E LSL+++M V V +
Sbjct: 180 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 239
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD Y+ L++C G+ L GK +H + + + D+ V +ALI +Y KCG + A V
Sbjct: 240 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKV 299
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGD 313
F PK D + W ++ISGY ++G L F M+ V PD +TL SV SA + +
Sbjct: 300 FMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 359
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
KLGR VHG+V + G + + + N L+ +Y G+ + +F M KD++SW+TM++C
Sbjct: 360 FKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVAC 419
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + ++ + M + P+ +T+ SVL ACAC+ NL+ G+K+H+LA+ G
Sbjct: 420 YADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEME 479
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++ L+DMY KC +KA+++F+++P K+VI+W + G N E++ FR M+
Sbjct: 480 TTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLS 539
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ +P+++ LV IL+ + +G L +HA ++ G + F+ +L+++Y +C ++
Sbjct: 540 SGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIED 599
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI---DSKGNWRKLMGLFRKC 607
A F +DV W+ ++ Y GQG A + F +M D+K N + + C
Sbjct: 600 ANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSAC 658
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 232/462 (50%), Gaps = 7/462 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL-----VRLCEWKRGYDEGLYLH 118
N+ L C G + L M ++ E+ N ++ C R G +H
Sbjct: 206 NALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIH 265
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ K + +G+A + ++ K G + A VF + D+ W +I GY ++G +
Sbjct: 266 GFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPE 325
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
AL+ + RM V PD T V C + + K G+ VH V R G + + + N+L
Sbjct: 326 LALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSL 385
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ +Y K G + A +F M +D ISW+ M++ Y +NG L LF M + + P++
Sbjct: 386 LHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNW 445
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+T+ SV+ A + + + G ++H + GF + +V L+ MY+ + E+ +F+R
Sbjct: 446 VTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNR 505
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KDV++W + S Y + + +++ ++ M + G+ PD I + +L+ + LG L
Sbjct: 506 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 565
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ LH ++ G + I +LI++Y+KC I+ A +VF + K+V++W+SII +
Sbjct: 566 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 625
Query: 479 NRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCG 518
+ EAL F +M + KPN+VT +SILSAC+ G + G
Sbjct: 626 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 202/384 (52%), Gaps = 8/384 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G D +V L +Y + + A +F P R WNA++ Y G
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216
Query: 278 EYMKGLMLFIMMREVLV-----DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
E+++ L LF M V PD ++S + + + LG+ +HG++ K+ D
Sbjct: 217 EWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMME 391
+ V + LI +Y G + KVF DVV WT++IS YE S P+ A+ + +M+
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+E PD +T+ SV SACA L N LG +H R GL + + +AN+L+ +Y K I
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A +F ++ DK++ISW++++ N + L F +M+ +KPN VT+VS+L ACA
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
I L G +IH A+ G + + AL+DMY++C + A + FN ++DV AW +
Sbjct: 457 CISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAV 516
Query: 570 LLTGYAERGQGALAEEFFRKMIDS 593
L +GYA+ G + FR M+ S
Sbjct: 517 LFSGYADNGMVHESMWVFRNMLSS 540
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 201/396 (50%), Gaps = 12/396 (3%)
Query: 73 NGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
+GS E AL + M + D LV++ C + G +H V + +
Sbjct: 321 SGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC 380
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ L ++ K G + +A +F +M D+D+ SW+ ++ YA G + L L+ M
Sbjct: 381 LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEML-DK 439
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+KP+ T VLR C + +L+ G ++H + +G+E + V AL+ MY+KC +A
Sbjct: 440 RIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKA 499
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ MPK+D I+W + SGY +NG + + +F M PD + L +++ +
Sbjct: 500 VDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL 559
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G + +H +VIK GF ++ + LI++Y + E+ KVF M KDVV+W+++I
Sbjct: 560 GILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSII 619
Query: 372 SCYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y ++A++ YQM + P+ +T S+LSAC+ G + GI + + +
Sbjct: 620 AAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVN--- 676
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP 461
Y + N+ ++D+ + +D AL+V + +P
Sbjct: 677 -KYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMP 711
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 295/586 (50%), Gaps = 33/586 (5%)
Query: 23 TRIPETSFYF-KPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALK 81
T P++S++F +T+ S++ V L+ +++LC G L AL
Sbjct: 41 TSTPKSSYFFVSARTQSHQSRSVNPVSQLSLL-----------EEISKLCEAGDLNGALD 89
Query: 82 YLDSMQELNICVD----EDALVNLVRLC------EWKRGYDEGLYLHSVVSKTMSHLSVR 131
+L + N D ++A+ L++ C E R DE L + S S L+ R
Sbjct: 90 FLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFV-LNTR 148
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L ++M+ G + VF ++ +++LF WN L+ GY + +DEA+ + + V
Sbjct: 149 L----ITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+PD +TFPC+++ C G D+ GK VH ++ G D+ V NA+I +Y KCG L A
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEA 264
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASE 309
+FD MP+++ ISWN++I G+ ENG +++ F + E + PD T+ +++
Sbjct: 265 VELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G+ +G +HG +K+G ++ VCN LI MY G E +F ++E+K VVSW +
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 370 MISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI Y EG V + ME E +E+TI ++L AC L LH ++R
Sbjct: 385 MIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLR 444
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+I N I Y+KC + A VF + K+V SW ++I G N +AL F
Sbjct: 445 HSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDF 504
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ +M L + P+ ++VS+L AC R+G L GKEIH LR G+ + F+ +LL +Y
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
C + F +++ WN +L+GY++ A FR+M+
Sbjct: 565 CSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQML 610
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 270/542 (49%), Gaps = 11/542 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN--ICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS + NG +A + S+ E + D +V L+ +C + D G+ +H +
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMA 339
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + + NA + M+ K G L A +F K+ ++ + SWN +IG Y++ GF E
Sbjct: 340 VKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETF 399
Query: 182 SLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++M W+ ++ + T +L C +L + +H + +R ++ + NA I
Sbjct: 400 DLLRKM-WMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
Y KCG LV A VF GM + SWNA+I G+ +NG+ +K L + M + + PD
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDF 518
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
++ S++ A +G + G+E+HG+V++ G + V L+ +Y G F RM
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERM 578
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ V W M+S Y + LP++A+ ++ M ++G PDEI IAS+L AC+ L L LG
Sbjct: 579 GDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGK 638
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H A++ L+ +A +L+DMY+K + + +F+++ K V SW +I G ++
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698
Query: 480 RSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +A+ F M + K P+ T + +L AC G + G A ++ + L +
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQ-MQTLYKLEPELEH 757
Query: 539 --ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++DM R GR+ A N N E D W+ LL+ + E+F K++ +
Sbjct: 758 YACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE 817
Query: 595 GN 596
N
Sbjct: 818 AN 819
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDK 463
+L C N+++G KL ++ + S + NT LI MYS C ++ VF ++ +K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEI 521
N+ W +++ G N EA+ F +++ +P++ T ++ AC + GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
H A+++G+ D F+ NA++ +Y +CG + A F+ E+++ +WN L+ G++E G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 581 ALAEEFFRKMIDS 593
A FR +++S
Sbjct: 293 LEAYRAFRSLLES 305
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 272/526 (51%), Gaps = 15/526 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G +AL+ + M E + ++ ++ C + + G +H + ++++ + L
Sbjct: 8 KGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESVARVDTVL 67
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L+++ K GDL + +F M R + +WN +I Y + FF EAL ++RM
Sbjct: 68 QNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRM----D 123
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV--IRFGYEADVDVVNALITMYVKCGDLVR 250
P TF VL C DL+ GK +H + +AD + N+L+TMY KCG L
Sbjct: 124 APPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLED 183
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASE 309
A VF G+ +++ SW AMI+ Y +NG + + +F MM E V+PD +T + V++A
Sbjct: 184 AERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACS 243
Query: 310 LVGDEKLGREVHGYVIK---MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+GD + G +H + + +G D + + ++ ++ G+ ++F RM + VV+
Sbjct: 244 TLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVT 303
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WTTMI+ Y +A+E Y M+ E PD+I +++VL AC+ L NL+ G +H
Sbjct: 304 WTTMIAAYNQRGYSMEALELYHCMDIE---PDDIALSNVLQACSRLKNLEQGRAVHSRIA 360
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+++ L+DMY KC + +A F ++VISWTS+I N EAL
Sbjct: 361 SRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALE 420
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F M L ++PNS+T +++ AC+R+ +L+ G+ +H+ + G D F+ NAL+ MY
Sbjct: 421 VFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYS 480
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ GR+ A F+S + +W ++L + G A E + ++
Sbjct: 481 KFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRI 526
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 262/523 (50%), Gaps = 11/523 (2%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS---HL 128
NG +A++ + D M E + D ++ C + G+ +H+++ + +
Sbjct: 209 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEY 268
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
L + LS+ + G L +F +M R + +W +I Y + G+ EAL LY M
Sbjct: 269 DDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM- 327
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
++PD VL+ C + +L++G+ VH + +E + V L+ MYVKCGDL
Sbjct: 328 ---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDL 384
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR FDG RD ISW ++I+ Y + L +F M V+P+ +T +VI A
Sbjct: 385 AEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDAC 444
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ GR +H V+ G D V N L+ MY FG + VF + K SW
Sbjct: 445 SRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWR 504
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
M+ + +A+E Y + EG P ++ L +C L ++ +H + +
Sbjct: 505 VMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSS 564
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
++++N L+++Y+KC ++KA VF Q+ +KN +SWT++I G N R EAL +
Sbjct: 565 DFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY 624
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ M +++PN + V ++S+CA +GAL+ G+ +HA G+ + + AL++MY +CG
Sbjct: 625 KAM--DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCG 682
Query: 549 RMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F+S D AWN + T YA+ G G+ E +R+M
Sbjct: 683 KLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREM 725
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 234/436 (53%), Gaps = 23/436 (5%)
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I YA+ G+ EAL LY+ M GV P+ TF CVL C G+ D++RGK+VH +
Sbjct: 1 MISAYAQKGYHREALELYEEMDE-RGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRES 59
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
D + NAL+ +Y KCGDL +R +F+ M +R +WN MI+ Y ++ + + L F
Sbjct: 60 VARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV--IKMGFSDDVSVCNPLIKMYL 344
R + P +T +SV+ A D + G+ +H + D + N L+ MY
Sbjct: 120 ---RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYG 176
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIA 403
G+ E+ E+VF + K+ SWT MI+ Y + +A+E + M +EG + PD IT A
Sbjct: 177 KCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 236
Query: 404 SVLSACACLGNLDLGIKLHQLAMRT---GLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
VL+AC+ LG+L+ G+++H L R GL ++ + ++ ++++C + E+F ++
Sbjct: 237 GVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE 520
P + V++WT++I S EAL + M +++P+ + L ++L AC+R+ L G+
Sbjct: 297 PHRTVVTWTTMIAAYNQRGYSMEALELYHCM--DIEPDDIALSNVLQACSRLKNLEQGRA 354
Query: 521 IHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
+H+ +A F P+ L+DMYV+CG + A F+ RDV +W L+T Y
Sbjct: 355 VHSR-----IASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAY 409
Query: 575 AERGQGALAEEFFRKM 590
+ G A E F M
Sbjct: 410 SHENFGREALEVFHSM 425
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 237/481 (49%), Gaps = 14/481 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+++ L+ ++I D+ AL N+++ C + ++G +HS ++ S+ + +
Sbjct: 317 SMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVD 376
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+VK GDL A F RD+ SW LI Y+ F EAL ++ M + GV+P+
Sbjct: 377 MYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSM-ELEGVEPNSI 435
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF V+ C + L G+ +H V+ G+ +D V NAL++MY K G + AR+VFD +
Sbjct: 436 TFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSI 495
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P + SW M+ +NG + L ++ + P S+ + + + D R
Sbjct: 496 PVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRAR 555
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+HG + F D+ + N L+ +Y G E+ VF +M K+ VSWTTMI Y +
Sbjct: 556 AIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNG 615
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
P +A+E Y+ M+ + P+ I V+S+CA LG L G ++H GL + +I
Sbjct: 616 RPAEALELYKAMDVQ---PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 672
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L++MY+KC + A E F + +W S+ + L +R+M L ++P
Sbjct: 673 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 732
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKP 552
N +TL+S+L AC+ +G L E H VA G P + + D+ R GR++
Sbjct: 733 NGITLLSVLVACSHMGML----EECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEE 788
Query: 553 A 553
A
Sbjct: 789 A 789
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 6/340 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAF 136
+AL+ SM+ + + ++ C G LHS V T H+S +GNA
Sbjct: 417 EALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVAT-GHISDEFVGNAL 475
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ KFG + A VF + + SW V++ + G EAL +Y R+ + G +P
Sbjct: 476 VSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIH-LEGFRPG 534
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
F L +C + D+ R + +H + + D+ + N L+ +Y KCG+L +ARLVFD
Sbjct: 535 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFD 594
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +++ +SW MI GY +NG + L L+ M V P+F+ VIS+ +G
Sbjct: 595 QMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGALVE 651
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ VH + G ++ + L+ MY G + F D +W +M + Y
Sbjct: 652 GQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQ 711
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ +E Y+ M +G P+ IT+ SVL AC+ +G L+
Sbjct: 712 FGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLE 751
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 120/228 (52%), Gaps = 11/228 (4%)
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y +A+E Y+ M+ G P++ T A VLSACA L +++ G K+H+ +
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
++ N L+++Y+KC ++++ +F + + V +W ++I ++ EAL FR
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-----VAFDGFLPNALLDMY 544
+M + P+S+T S+L AC L GK IH +IG + D L N+L+ MY
Sbjct: 121 RM--DAPPSSITFTSVLGACCSPDDLETGKAIHR---QIGGSSPQIQADEILQNSLVTMY 175
Query: 545 VRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
+CG ++ A F+ R + +W ++T YA+ G A E F M+
Sbjct: 176 GKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMM 223
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H V+ + + + L N ++++ K G+L A VF +M +++ SW +IGGYA+ G
Sbjct: 557 IHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGR 616
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL LY+ M V+P+ F V+ +C + L G+ VH + G + + +V
Sbjct: 617 PAEALELYKAM----DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 672
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG L AR FD D +WN+M + Y + G + L L+ M V P
Sbjct: 673 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 732
Query: 297 DFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
+ +TL SV+ A +G E+ V G + + + + G EE EKV
Sbjct: 733 NGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKV 792
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 282/531 (53%), Gaps = 14/531 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVD---EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
LC +L AL + S + + ++A+ L++ C ++ + G LH VS +
Sbjct: 15 LCETDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTH 74
Query: 127 HLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ + L + M+ G + VF M ++L WN L+ GY + G + + + ++
Sbjct: 75 YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ +PD +TFP V++ CGG+ D++ G+ +H VI+ G DV V NAL+ MY KC
Sbjct: 135 DLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLSSV 304
G + A VFD MP+ + +SWN+MI + ENG +L M+ E + PD +T+ ++
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ G+ +G +HG +K+G S++V V N ++ MY G E + F + +K+V
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314
Query: 365 VSWTTMISCY--EGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSACACLGNLDLGIK 420
VSW TMIS + EG V ++A Q M+ +G +E+TI +VL AC L +
Sbjct: 315 VSWNTMISAFSLEGDV--NEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH + R ++ ++N I Y+KC ++ A +VFH I DK V SW ++I G N
Sbjct: 373 LHGYSFRH-CFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD 431
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+AL + F+ +P+ T+ S+L ACA + +L GKEIH + LR G+ D F+ +
Sbjct: 432 PRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTS 491
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
LL Y+ CG+ A F+ ++++ +WN +++GY++ G + FRK
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRK 542
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 254/518 (49%), Gaps = 12/518 (2%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
++ + E + D +V ++ +C + D G+ +H + K V + NA + M+ K
Sbjct: 236 MEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSK 295
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-VKPDVYTFP 201
G L A F K ++++ SWN +I ++ G +EA +L Q M G +K + T
Sbjct: 296 CGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTIL 355
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VL C L+ KE+H + R ++ V++ NA I Y KCG L A VF G+ +
Sbjct: 356 NVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDK 414
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
SWNA+I G+ +NG+ K L L M PD+ T+SS++ A + + G+E+H
Sbjct: 415 TVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
GYV++ G D V L+ Y+ G +F RM+ K++VSW MIS Y + LP
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+++ ++ +EG EI I SV AC+ L L LG + H ++ + ++I
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSII 594
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSV 500
DMY+K CI ++ +VF + DKNV SW +II+ ++ EA+ + +M + P+
Sbjct: 595 DMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRF 654
Query: 501 TLVSILSACARIGALMCG----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
T + IL AC G + G KE+ L I + + L+DM R GR+ A
Sbjct: 655 TYIGILMACGHAGLVEEGLKYFKEMQNFNL-IEPKLEHYA--CLIDMLARAGRLDDALRL 711
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N E D W+ LL G + E+ +K+++
Sbjct: 712 VNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLE 749
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-LID 442
++++ A S+ + I +L AC +++ G +LH+ + + NT LI
Sbjct: 28 IQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIK 87
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSV 500
MY+ C + VF + KN+I W +++ G N + + F ++ + +P++
Sbjct: 88 MYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNF 147
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-S 559
T S++ AC I + G+ IH +++G+ D F+ NAL+ MY +CG + A F+
Sbjct: 148 TFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFM 207
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
E ++ +WN ++ ++E G + + +M+ +G
Sbjct: 208 PETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEG 243
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/541 (30%), Positives = 279/541 (51%), Gaps = 9/541 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A+ M + L +++ C +++G +H+ V K S +
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
GNA ++++++FG L A VF +M CDR F N LI +A+ G + AL +++ M +
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTF--NTLISRHAQCGNGESALEIFEEMR-L 237
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G PD T +L C + DL +GK++H ++++ G D + +L+ +YVKCG +V
Sbjct: 238 SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVE 297
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F + + + WN M+ Y + + K LF M V P+ T ++
Sbjct: 298 ALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTY 357
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+ LG ++H IK GF D+ V LI MY +G ++ ++ +E+KDVVSWT+M
Sbjct: 358 AGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSM 417
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y +A+ET++ M+ G PD I +AS +SACA + + G ++H +G
Sbjct: 418 IAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGY 477
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + I N L+++Y++C +A +F I K+ I+W ++ G + EAL F K
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIK 537
Query: 491 M-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M +K N T VS +SA A + + GK+IHA ++ G + + NAL+ +Y +CG
Sbjct: 538 MYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGS 597
Query: 550 MKPAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRK 606
++ A Q F +ER+ +WN ++T ++ G G A + F +M K N +G+
Sbjct: 598 IEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAA 657
Query: 607 C 607
C
Sbjct: 658 C 658
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 253/463 (54%), Gaps = 3/463 (0%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EA+ LY +M G
Sbjct: 80 GNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH-CSG 138
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P Y VL C ++G+ VH V + G ++ V NALI +Y++ G L A
Sbjct: 139 VVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAE 198
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MP DR+++N +IS + + G L +F MR PD +T++S+++A +G
Sbjct: 199 RVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G+++H Y++K G S D + L+ +Y+ G E ++F + +VV W M+
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y K+ + + M A G P+E T +L C G ++LG ++H L+++TG S
Sbjct: 319 AYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFES 378
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++ LIDMYSK +DKA + + K+V+SWTS+I G + EAL F+ M
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L + P+++ L S +SACA I A+ G++IH+ G + D + NAL+++Y RCGR K
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSK 498
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A++ F + E +D WN +++G+A+ G A E F KM +
Sbjct: 499 EAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 235/444 (52%), Gaps = 4/444 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C NG E AL+ + M+ D + +L+ C ++G LHS + K
Sbjct: 222 CGNG--ESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDY 279
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ + L ++VK G + A +F ++ WN+++ Y + ++ L+ +M
Sbjct: 280 IIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMV-A 338
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV+P+ +T+PC+LRTC ++ G+++H+ I+ G+E+D+ V LI MY K G L +
Sbjct: 339 AGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDK 398
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR + + + +D +SW +MI+GY ++ + L F M+ + PD + L+S ISA
Sbjct: 399 ARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAG 458
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + G+++H V G+S DVS+ N L+ +Y G +E +F +E KD ++W M
Sbjct: 459 IKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGM 518
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+S + S L ++A+E + M G + T S +SA A L ++ G ++H ++TG
Sbjct: 519 VSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGC 578
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S +AN LI +Y KC I+ A F ++ ++N +SW +II + EAL F +
Sbjct: 579 TSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQ 638
Query: 491 M-MLNLKPNSVTLVSILSACARIG 513
M LKPN VT + +L+AC+ +G
Sbjct: 639 MKQEGLKPNDVTFIGVLAACSHVG 662
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 207/407 (50%), Gaps = 4/407 (0%)
Query: 200 FPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F C LR C G V +H I G D N LI +Y K G + RAR VF+ +
Sbjct: 44 FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD +SW AM+SGY NG + + L+ M V P LSSV+SA + GR
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
VH V K G + V N LI +YL FG+ E+VFS M D V++ T+IS +
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ A+E ++ M G PD +TIAS+L+ACA +G+L+ G +LH ++ G+ II
Sbjct: 224 NGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEG 283
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKP 497
+L+D+Y KC I +ALE+F NV+ W +++ ++++ + +F + + ++P
Sbjct: 284 SLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRP 343
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N T +L C G + G++IH +++ G D ++ L+DMY + G + A
Sbjct: 344 NEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL 403
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
E +DV +W ++ GY + A E F+ M G W +GL
Sbjct: 404 EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDM-QLFGIWPDNIGL 449
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 276/521 (52%), Gaps = 3/521 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL M L + +E ++++ C + G +H VV + V +
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N + M+ K + + +F ++ +R++ SWN L Y + F EA+ L+ M + G
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMV-LSG 253
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ ++ ++ C G+ D RGK +H ++I+ GY+ D NAL+ MY K GDL A
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + + D +SWNA+I+G + + + L L M+ + P+ TLSS + A +G
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMG 373
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++LGR++H ++KM D+ V L+ MY E+ F+ + KD+++W +IS
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ + M EG ++ T++++L + A L + + ++H L++++G S
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 493
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + N+LID Y KC ++ A +F + +++S+TS+I + EAL F +M
Sbjct: 494 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 553
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ LKP+ S+L+ACA + A GK++H H L+ G D F N+L++MY +CG +
Sbjct: 554 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 613
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F+ ER + +W+ ++ G A+ G G A + F +M+
Sbjct: 614 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 654
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 273/497 (54%), Gaps = 9/497 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L+ C + GL +H+ ++K+ + N ++++ K + G+A + + + D
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD 121
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SW+ LI GYA+ G AL + M + GVK + +TF VL+ C V DL+ GK+VH
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLL-GVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V+ G+E DV V N L+ MY KC + + ++ +FD +P+R+ +SWNA+ S Y +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCG 240
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + LF M + P+ +LSS+++A + D G+ +HGY+IK+G+ D N L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL---PDKAVETYQMMEAEGSMP 397
MY G+ + VF +++ D+VSW +I+ G VL ++A+E M+ G P
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIA---GCVLHEHHEQALELLGQMKRSGICP 357
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T++S L ACA +G +LG +LH M+ + S + ++ L+DMYSKC ++ A F
Sbjct: 358 NIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ +P+K++I+W +II G EAL F +M + N TL +IL + A + +
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 477
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
+++H +++ G D ++ N+L+D Y +C ++ A F D+ ++ ++T YA
Sbjct: 478 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYA 537
Query: 576 ERGQGALAEEFFRKMID 592
+ GQG A + F +M D
Sbjct: 538 QYGQGEEALKLFLEMQD 554
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 256/486 (52%), Gaps = 13/486 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E +L ++V C R G +H + K NA + M+ K GDL A VF
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVF 316
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
K+ D+ SWN +I G ++AL L +M G+ P+++T L+ C G+
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM-KRSGICPNIFTLSSALKACAGMGLK 375
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++H +++ E+D+ V L+ MY KC L AR+ F+ +P++D I+WNA+ISGY
Sbjct: 376 ELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ E M+ L LF+ M + + + TLS+++ ++ + + R+VHG +K GF D+
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 495
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N LI Y + E+ E++F D+VS+T+MI+ Y ++A++ + M+
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 555
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
PD +S+L+ACA L + G +LH ++ G + I N+L++MY+KC ID A
Sbjct: 556 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 615
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
F ++ ++ ++SW+++I GL + +AL F +M+ + PN +TLVS+L AC
Sbjct: 616 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 675
Query: 513 GALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN--ERDVS 565
G L+ +++ ++ GF P ++D+ R G++ A N E + S
Sbjct: 676 G-LVTEAKLYFESME---ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANAS 731
Query: 566 AWNILL 571
W LL
Sbjct: 732 VWGALL 737
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 213/402 (52%), Gaps = 2/402 (0%)
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P ++ +L C L+ G ++H H+ + G D + N LI +Y KC +
Sbjct: 50 GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGY 109
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR + D + D +SW+A+ISGY +NG LM F M + V + T SSV+ A +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
V D ++G++VHG V+ GF DV V N L+ MY + +++F + ++VVSW +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
SCY +AV + M G P+E +++S+++AC L + G +H ++ G
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
AN L+DMY+K + A+ VF +I +++SW ++I G L+ +AL +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + PN TL S L ACA +G G+++H+ +++ + D F+ L+DMY +C
Sbjct: 350 MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL 409
Query: 550 MKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A FN E+D+ AWN +++GY++ + A F +M
Sbjct: 410 LEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 451
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 211/418 (50%), Gaps = 5/418 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L+ EQAL+ L M+ IC + L + ++ C + G LHS + K
Sbjct: 328 NAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK 387
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M+ K L A F + ++DL +WN +I GY++ EALSL
Sbjct: 388 MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSL 447
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ + T +L++ G+ + ++VH ++ G+ +D+ VVN+LI Y
Sbjct: 448 FVEMH-KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYG 506
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A +F+ D +S+ +MI+ Y + G+ + L LF+ M+++ + PD SS
Sbjct: 507 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++A + + G+++H +++K GF D+ N L+ MY G+ ++ + FS + +
Sbjct: 567 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG 626
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW+ MI +A++ + M EG P+ IT+ SVL AC G L KL+
Sbjct: 627 IVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG-LVTEAKLYF 685
Query: 424 LAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+M G +ID+ + I++A+E+ +++P + N W +++ R++
Sbjct: 686 ESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 743
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 266/549 (48%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C G ++ M + D L L++ C G+ +H+V K
Sbjct: 105 NALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVK 164
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + VR G+A + M+ K L A F M +R+ SW I G + + L L
Sbjct: 165 TGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLEL 224
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ +M +G GV Y V R+C + L +++H H I+ + AD V A++ +Y
Sbjct: 225 FVQMQRLGLGVSQPAYA--SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVY 282
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K LV AR F +P + NAM+ G G + L LF M + D ++LS
Sbjct: 283 AKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLS 342
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V SA V G +VH IK GF DV V N ++ +Y E VF ME +
Sbjct: 343 GVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR 402
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + + + M G PD+ T SVL ACA L +L+ G +H
Sbjct: 403 DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A+++GL +++T++DMY KC I +A ++ +I + ++SW SII G LN +S
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSE 522
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FF +M+ + +KP+ T ++L CA + + GK+IH ++ + D ++ + L+
Sbjct: 523 EAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLV 582
Query: 542 DMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWR 598
DMY +CG M + F ++ D +WN ++ GYA GQG A E F +M + N
Sbjct: 583 DMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHA 642
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 643 TFVAVLRAC 651
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 249/475 (52%), Gaps = 5/475 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H N L+ + GD G A +FG M D D+ SWN L+ GY + G F ++
Sbjct: 61 VFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDS 120
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L M G V PD T +L+ CGG+ DL G ++H ++ G E DV +AL+
Sbjct: 121 VGLSVEMARRG-VAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVD 179
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC L A F GM +R+ +SW A I+G +N +Y +GL LF+ M+ + +
Sbjct: 180 MYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPA 239
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+SV + + R++H + IK FS D V ++ +Y + + + F +
Sbjct: 240 YASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ V + M+ + L +A++ +Q M G D ++++ V SACA + G++
Sbjct: 300 NHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ 359
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H LA+++G + + N ++D+Y KCK + +A VF ++ ++ +SW +II L N
Sbjct: 360 VHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE-QNE 418
Query: 481 SFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+E I + ML ++P+ T S+L ACA + +L G +H A++ G+ D F+ +
Sbjct: 419 CYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS 478
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DMY +CG + A + +++ +WN +++G++ Q A++FF +M+D
Sbjct: 479 TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLD 533
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 221/444 (49%), Gaps = 2/444 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L+ MQ L + V + A ++ R C LH+ K +
Sbjct: 215 NEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVV 274
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K L A F + + + + N ++ G + G EAL L+Q M G
Sbjct: 275 GTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTR-SG 333
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ DV + V C V +G +VH I+ G++ DV V NA++ +Y KC LV A
Sbjct: 334 IGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAY 393
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF M +RD +SWNA+I+ +N Y + M ++PD T SV+ A +
Sbjct: 394 LVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQ 453
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G VHG IK G D V + ++ MY G E +K+ R+ +++VSW ++IS
Sbjct: 454 SLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIIS 513
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + ++A + + M G PD T A+VL CA L ++LG ++H ++ ++
Sbjct: 514 GFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLG 573
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
I++TL+DMY+KC + +L +F + + +SW ++I G L+ + FEAL F +M
Sbjct: 574 DEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQ 633
Query: 492 MLNLKPNSVTLVSILSACARIGAL 515
N+ PN T V++L AC+ +G L
Sbjct: 634 QANVVPNHATFVAVLRACSHVGLL 657
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 217/446 (48%), Gaps = 4/446 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G +AL+ M I D +L + C +GY +GL +H + K
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + V + NA L ++ K L A+ VF +M RD SWN +I + +++ ++
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAY 426
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
M G++PD +T+ VL+ C G+ L+ G VH I+ G D V + ++ MY
Sbjct: 427 LNEMLRY-GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYC 485
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A+ + D + ++ +SWN++ISG+ N + + F M ++ V PD T ++
Sbjct: 486 KCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYAT 545
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + +LG+++HG +IK D + + L+ MY GN + +F + + D
Sbjct: 546 VLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLD 605
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
VSW MI Y +A+E ++ M+ +P+ T +VL AC+ +G LD G + +
Sbjct: 606 FVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFY 665
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+ R L + ++D+ + K +AL+ +P + + + W +++ ++ +
Sbjct: 666 LMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKI-RQD 724
Query: 482 FEALIFFRKMMLNLKPNSVTLVSILS 507
E +L L P+ ++ +LS
Sbjct: 725 VEVAETAASNVLRLDPDDSSVYILLS 750
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 35/410 (8%)
Query: 199 TFPCVLRTCGGV--PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF + + C G L G+ H ++ G+ V N L+ MY +CG AR VFD
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 257 GMPKRDR-------------------------------ISWNAMISGYFENGEYMKGLML 285
MP RD +SWNA++SGY + G + + L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
+ M V PD TL+ ++ A + D LG ++H +K G DV + L+ MY
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
+ E+ + F M ++ VSW I+ + + +E + M+ G + ASV
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+CA + L +LH A++ + ++ ++D+Y+K + A F +P+ V
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAH 524
+ ++++GL EAL F+ M + + + V+L + SACA + + G ++H
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
A++ G D + NA+LD+Y +C + A+ F E RD +WN ++
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAA 413
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 499 SVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ T + CA G AL G+ HA L G F+ N LL MY RCG A
Sbjct: 2 TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLM------GLFR 605
F+ RD +WN +LT YA G A F M D +W L+ G+FR
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFR 118
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 255/462 (55%), Gaps = 5/462 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S++ FG + A +F ++ + DL+SW V+I Y + E + Y +
Sbjct: 77 LVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEY 136
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D F VL+ C + + G+++H +++ G D V+ L+ MY KC ++ +R VF
Sbjct: 137 DNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVF 195
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + R+ + W +MI GY +N +GL+LF MRE LV+ + TL S+++A +G
Sbjct: 196 DEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALH 255
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ VHGYVIK GF + + PL+ +Y G+ + VF + + D+VSWT MI Y
Sbjct: 256 QGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYA 315
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
P +A++ + + +P+ +T +SVLSACA G+L++G +H L ++ G
Sbjct: 316 QRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDAT 374
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
N L+DMY+KC I A VF + DK+VI+W SII G N ++EAL F +M +
Sbjct: 375 FENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS 434
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPA 553
+ P+++TLVS+LSACA +GA G +H +A++ G ++ ++ ALL+ Y +CG + A
Sbjct: 435 VYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESA 494
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F+ E++ W+ ++ GY +G + + E F M+ K
Sbjct: 495 RVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEK 536
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 272/533 (51%), Gaps = 21/533 (3%)
Query: 72 LNGSLEQALKYLDSMQELNICVDE-DALVN--LVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
LN S + +++ ++ L C++E D +V +++ C R DEG LH + K S
Sbjct: 114 LNDSYSEIVQFYNT--RLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPD 171
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S L + M+ K ++ + VF ++ DR++ W +I GY + E L L+ RM
Sbjct: 172 SFVL-TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMR 230
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G V+ + YT ++ C + L +GK VH +VI+ G++ + +V L+ +Y KCGD+
Sbjct: 231 -EGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDI 289
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VFD + D +SW AMI GY + G + L LF R + P+ +T SSV+SA
Sbjct: 290 RDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSAC 349
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G +GR VH IK+G S+D + N L+ MY + VF + KDV++W
Sbjct: 350 AQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWN 408
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++IS Y + +A+E + M ++ PD IT+ SVLSACA +G +G LH A++
Sbjct: 409 SIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKA 468
Query: 429 GLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL+S + + L++ Y+KC + A +F ++ +KN I+W+++I G + +L
Sbjct: 469 GLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLEL 528
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
F M+ L+PN V +ILSAC+ G L G ++ F+P+ ++
Sbjct: 529 FGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVY----NFVPSMKHYACMV 584
Query: 542 DMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
D+ R GR++ A + + DVS L G + L E R+M++
Sbjct: 585 DLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLE 637
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 218/438 (49%), Gaps = 6/438 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L++ L + M+E + ++ L +LV C +G ++H V K+ L+ L
Sbjct: 216 NDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFL 275
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
L ++ K GD+ A+ VF ++ DL SW +I GYA+ G+ EAL L+ W
Sbjct: 276 VTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERW-KD 334
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T VL C L G+ VH I+ G E D NAL+ MY KC + AR
Sbjct: 335 LLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDAR 393
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + +D I+WN++ISGY +NG + L LF MR V PD +TL SV+SA VG
Sbjct: 394 YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453
Query: 313 DEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++G +HGY IK G S V V L+ Y G+ E +F M K+ ++W+ MI
Sbjct: 454 AYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMI 513
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
Y +++E + M E P+E+ ++LSAC+ G L G + + +
Sbjct: 514 GGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNF 573
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL-GLRLNNRSFEALIFFR 489
+ + ++D+ ++ +++AL+ +IP + +S L G RL++R + R
Sbjct: 574 VPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVR 633
Query: 490 KMMLNLKPNSVTLVSILS 507
+ ML L P+ ++S
Sbjct: 634 R-MLELHPDKACYYVLMS 650
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 208/398 (52%), Gaps = 16/398 (4%)
Query: 201 PC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
PC +L C V L++ +H ++ G D+ L+++Y G + ARL+FD +
Sbjct: 41 PCFSLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRI 97
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLG 317
D SW MI YF N Y + + + +R+ L + D + S V+ A + + G
Sbjct: 98 RNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEG 157
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EG 376
R++H ++K+G S D V L+ MY E+ +VF + ++VV WT+MI Y +
Sbjct: 158 RKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 216
Query: 377 SVLPDKAVETYQMMEA--EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
L + V +M E EG ++ T+ S+++AC LG L G +H +++G
Sbjct: 217 DCLKEGLVLFNRMREGLVEG---NQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNS 273
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMML 493
+ L+D+Y KC I A VF ++ +++SWT++I+G EAL +F +
Sbjct: 274 FLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWK 333
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+L PN+VT S+LSACA+ G+L G+ +H +++G + D NAL+DMY +C + A
Sbjct: 334 DLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDA 392
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + ++DV AWN +++GY + G A E F +M
Sbjct: 393 RYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQM 430
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL+ D M+ ++ D LV+++ C Y G LH K
Sbjct: 408 NSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIK 467
Query: 124 T-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ SV +G A L+ + K GD A +F +M +++ +W+ +IGGY G +L
Sbjct: 468 AGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLE 527
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTC 207
L+ M ++P+ F +L C
Sbjct: 528 LFGDML-KEKLEPNEVIFTTILSAC 551
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 249/459 (54%), Gaps = 15/459 (3%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N + + L G L+ AL ++DS Q+ + A NL+R C G +H V
Sbjct: 40 NRRQQQGKSALPGGLDNALVWIDSHQQEDCA---PAYGNLLRDCG---ELAAGKKIHEHV 93
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + +V +GN + M+ K G L A VF M RD SW+ +I GY + G EA+
Sbjct: 94 VKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREAI 153
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
LY+ M + PD +TF VL C G L+ GKE+H H+ R + DV V +AL+
Sbjct: 154 KLYKAM----AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDVFVDSALV 209
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPD 297
TM+ KCG L +R VFD +D + WN+MI Y ++G + + LF M V+P+
Sbjct: 210 TMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPN 269
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+T ++V++A V D + G+EVH ++ GF D + N L+ MY G+ E +VF
Sbjct: 270 AITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFD 329
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M+ + VVSWT +IS Y P +A++ Y+ M +EG P+ IT ASVLSAC+ LG L+
Sbjct: 330 GMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEE 389
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H G + +AN L+ +Y KC +D A +VF ++ +NV+SWT++I
Sbjct: 390 GKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAH 449
Query: 478 NNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
+ S EA+ ++ M L ++ +S ++L+AC++ G L
Sbjct: 450 HRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLL 488
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 221/394 (56%), Gaps = 12/394 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LR CG +L GK++H HV++ GY +V V N L+ MY KCG L A+ VFDGM +RD
Sbjct: 76 LLRDCG---ELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRD 132
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREV 320
ISW+ MI+GY +G + + L+ M +DPD T S+V++A +G L G+E+
Sbjct: 133 SISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEI 189
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H ++ ++ DV V + L+ M+ G+ +E +VF KDV+ W +MI Y S P
Sbjct: 190 HAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHP 249
Query: 381 DKAVETYQMMEAEGS--MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+A+E ++ M + P+ IT +VL+AC+ + +L+ G ++H+ + G N
Sbjct: 250 REAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAEN 309
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
+L++MY+KC I +A EVF + + V+SWT II EAL +RKM ++P
Sbjct: 310 SLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEP 369
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N +T S+LSAC+ +GAL GK +HA G D + NAL+ +Y +CG + A F
Sbjct: 370 NGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVF 429
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + R+V +W +++ YA A + ++ M
Sbjct: 430 DRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAM 463
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 208/414 (50%), Gaps = 16/414 (3%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R + G +H+ + + V + +A ++MF K G L + VF +D+ WN +I
Sbjct: 181 RALEVGKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMI 240
Query: 169 GGYAKAGFFDEALSLYQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
Y+++G EA+ L++ M V+P+ T+ VL C V DL++GKEVH ++ G
Sbjct: 241 VAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAG 300
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ D N+L+ MY KCG + AR VFDGM +R +SW +IS Y G + L L+
Sbjct: 301 FQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYR 360
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V+P+ +T +SV+SA +G + G+ VH + G+ D++V N L+ +Y G
Sbjct: 361 KMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCG 420
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ + KVF RM+ ++VVSWT MIS Y ++A++ Y+ M+ EG +VL+
Sbjct: 421 SVDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLT 480
Query: 408 ACACLGNLD-----LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP- 461
AC+ G L+ G L Y+ +A L + + +A E+ +P
Sbjct: 481 ACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVL----GRAGRLAEAEELLAVMPF 536
Query: 462 DKNVISWTSIILGLRLNNR----SFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
+ ++W ++ + +N + A + FR LN P V L +I A R
Sbjct: 537 EAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPY-VLLSNIYVAAGR 589
>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 249/460 (54%), Gaps = 6/460 (1%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F + D + WN +I GY +AG EAL + M G+ PD Y+F L+ C G
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D K+G +H + G E+DV + AL+ MY K DLV AR VFD M +D ++WN M+S
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G +NG L+LF MR VD D ++L ++I A + + R +HG VIK GF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
S + LI MY + + E VF + KD SW TM++ Y + ++ +E + +M
Sbjct: 235 AFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+++ AS L A A +G+L GI +H A++ GLI + +A +L+ MYSKC ++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F I D++V+SW+++I + EA+ FR MM +++KPN+VTL S+L CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
+ A GK IH +A++ + + A++ MY +CGR PA F +D A+N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 570 LLTGYAERGQGALAEEFFR--KMIDSKGNWRKLMGLFRKC 607
L GY + G A + ++ K+ + R ++G+ + C
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 271/550 (49%), Gaps = 8/550 (1%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
QV + + + T N + ++ L NG AL M+ + +D +L NL+
Sbjct: 156 QVFDKMHVKDVVTWN--TMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
D LH +V K + + M+ DL A VF ++ +D SW +
Sbjct: 214 LEKSDVCRCLHGLVIK--KGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTM 271
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+ YA GFF+E L L+ M V+ + L+ V DL +G +H + ++ G
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYD-VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
DV V +L++MY KCG+L A +F + RD +SW+AMI+ Y + G++ + + LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + + P+ +TL+SV+ V +LG+ +H Y IK ++ +I MY G
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
K F R+ KD V++ + Y +KA + Y+ M+ G PD T+ +L
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
CA + G ++ ++ G S +A+ LI+M++KC + A+ +F + +K+ +
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV 570
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++ G L+ ++ EA+ FR+M + +PN+VT V+I+ A A + AL G +H+
Sbjct: 571 SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAE 584
++ G + N+L+DMY +CG ++ + F + + + +WN +L+ YA G + A
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 585 EFFRKMIDSK 594
F M +++
Sbjct: 691 SLFLSMQENE 700
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 237/451 (52%), Gaps = 3/451 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+ L+ D M+ ++ +++ A + ++ + +G+ +H + V +
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +SM+ K G+L A +F + DRD+ SW+ +I Y +AG DEA+SL++ M +
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH- 396
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T VL+ C GV + GK +H + I+ E++++ A+I+MY KCG A
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ +P +D +++NA+ GY + G+ K ++ M+ V PD T+ ++
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
D G V+G +IK GF + V + LI M+ +F + K VSW M+
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y ++AV T++ M+ E P+ +T +++ A A L L +G+ +H ++ G
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + N+L+DMY+KC I+ + + F +I +K ++SW +++ + + A+ F M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEI 521
N LKP+SV+ +S+LSAC G + GK I
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 4/408 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++A+ M ++I + L ++++ C G +H K +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +SM+ K G A F ++ +D ++N L GY + G ++A +Y+ M + GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHGV 498
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T +L+TC D RG V+ +I+ G++++ V +ALI M+ KC L A +
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD ++ +SWN M++GY +G+ + + F M+ P+ +T +++ A+ +
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++G VH +I+ GF V N L+ MY G E EK F + +K +VSW TM+S
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLI 431
Y L AV + M+ PD ++ SVLSAC G ++ G ++ ++ R +
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLN 478
+ + ++D+ K +A+E+ ++ K + W +++ R++
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 13/396 (3%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+VH +I G + ++NA +++ + DL +R++FD + + WN+MI GY G
Sbjct: 23 QVHGSLIVSGLKPHNQLINAY-SLFQR-QDL--SRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 278 EYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L F M E +DPD + + + A D K G +H + +MG DV +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L++MY + +VF +M KDVV+W TM+S + A+ + M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D +++ +++ A + L D+ LH L ++ G I ++ LIDMY C + A V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGA 514
F ++ K+ SW + ++ +N FE ++ +M N ++ N V S L A A +G
Sbjct: 257 FEEVWRKDESSWGT-MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTG 573
L+ G IH +A++ G+ D + +L+ MY +CG ++ A F N +RDV +W+ ++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 574 YAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
Y + GQ A FR M I K N L + + C
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 240/461 (52%), Gaps = 6/461 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L VK G LG+A +F KM +D SW LI GY A EAL L++ M G+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + + CG D+ G+ +H + ++ G V V +AL+ MY K G + R
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP R+ +SW A+I+G G + L+ F M V+ D T + + A G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H +K GF V N L MY G E G +F +M +DVVSWTT+I+
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITT 292
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ AV+ + M P+E T A+V+S CA L ++ G +LH L + GL +
Sbjct: 293 LVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAAS 352
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRK 490
+ + N+++ MY+KC + + +FH++ ++++SW++II G + +FE L + R
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR- 411
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M KP L S+LSAC + L GK++HA+ L IG+ + +AL++MY +CG +
Sbjct: 412 -MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 551 KPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F++ E D+ +W ++ GYAE G + F K+
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKI 511
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 290/621 (46%), Gaps = 44/621 (7%)
Query: 10 SQTPLRQNLRN-PKTRIPETSFYFKP--KTRHFSS------KNAQSVQVLNTQNTSSIAT 60
S L QN+ +T +PE++ K KT H + K +Q ++ T S
Sbjct: 33 SNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVN 92
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
N +S L N +E L+ +D L + C + G LH
Sbjct: 93 ANDSSEALLLFKNMRVESGLR-----------IDPFILSLAHKACGLNSDVNYGELLHGY 141
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
KT SV +G+A L M+ K G + VF +M R++ SW +I G +AG+ EA
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEA 201
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M W V+ D YTF L+ C L G+E+H ++ G++ V N L T
Sbjct: 202 LVYFSEM-WRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLAT 260
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG L +F+ M RD +SW +I+ + G+ + FI MRE V P+ T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++VIS + + G ++H ++ +G + +SV N ++ MY G +F M
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D+VSW+T+I+ Y +A E M EG P E +ASVLSAC + L+ G +
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH + GL ++ + LI+MY KC I++A +F + +++SWT++I G +
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPN 538
S E + F K+ + L+P+SVT + +LSAC+ G + G + +A + + ++
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYG 560
Query: 539 ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT-----GYAERGQGALAEEFFR--- 588
++D+ R GR+ A + + RD W+ LL G ERG+ AE +
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRT-AERILQLEP 619
Query: 589 ----------KMIDSKGNWRK 599
+ SKG WR+
Sbjct: 620 NCAGTHITLANIYASKGKWRE 640
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 204/400 (51%), Gaps = 8/400 (2%)
Query: 197 VYTFPCVLRT-CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
++T P V T C + L+R + I F + D+ N + VK G L AR +F
Sbjct: 13 LFTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMF 72
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR---EVLVDPDFMTLSSVISASELVG 312
D M ++D ISW +ISGY + + L+LF MR + +DP ++L+ A L
Sbjct: 73 DKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAH--KACGLNS 130
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G +HGY +K G + V V + L+ MY G EG +VF M ++VVSWT +I+
Sbjct: 131 DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIIT 190
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +A+ + M D T A L ACA G L+ G ++H AM+ G
Sbjct: 191 GLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKM 491
+ANTL MY+KC ++ L +F ++ ++V+SWT+II L ++ F R
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
++ PN T +++S CA + + G+++HA L +G+A + N+++ MY +CG++
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ RD+ +W+ ++ GY++ G + A E M
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWM 410
>gi|297722397|ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group]
gi|53749418|gb|AAU90276.1| PPR repeat containing protein [Oryza sativa Japonica Group]
gi|108710059|gb|ABF97854.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|215707171|dbj|BAG93631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674740|dbj|BAH92290.1| Os03g0644100 [Oryza sativa Japonica Group]
Length = 616
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 303/585 (51%), Gaps = 31/585 (5%)
Query: 9 TSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLN 68
+S P R N +P R + +P R FS+KN S +N ++
Sbjct: 16 SSLPPFRTNSLSPTVRGGNAAPR-RPLARSFSAKN------------RSPRARNRHAAAG 62
Query: 69 ELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+ GS EQ + S+ + +AL + +R C G D +H+V +++ L
Sbjct: 63 DGGGYGSPEQEGRGESSLP------NAEALASSLRDCG---GADGVRRVHAVAVRSLDSL 113
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ N +S + +F ++ A VF +M +R + SW ++ Y K G + E + L+ M
Sbjct: 114 GTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDM- 172
Query: 189 WVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
VG GV+ + TF C+L++CG D K G++VH +++ G+ ++V V +A+ Y +CGD
Sbjct: 173 -VGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCGD 230
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A +FD M RD ISW MI+ Y ++G + L +F M P+ T+ SV+ A
Sbjct: 231 VASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKA 290
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ G+++H V+K + +D+ + + L+ MY G + + VF M ++ ++W
Sbjct: 291 CAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITW 350
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+MIS Y S +KA+ ++ M+ + +TI +LSAC L + LG +LH ++
Sbjct: 351 TSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIK 410
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ + I +TL+ Y KC A + +PD++ ISWT++I G + EAL
Sbjct: 411 NSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVEALKS 470
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
M+ + +KPN+ T S L ACA++ AL G++IH + + F+ ++L+DMY+R
Sbjct: 471 LDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMR 530
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG++ A + F++ E ++ W +++TG+A+ G L EE + M
Sbjct: 531 CGKVDEARSVFDAMPEHNLVTWKVIITGFAQNG---LCEEALKYM 572
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 210/387 (54%), Gaps = 6/387 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + +A + + GD+ A +F KM RD+ SW +I Y + G +AL ++ M
Sbjct: 214 NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMV 273
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G +P+ +T VL+ C ++ GK++H V++ Y+ D+ + +AL+TMY +CG++
Sbjct: 274 -SEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEV 332
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVIS 306
A+ VFD MP+R+ I+W +MISGY ++G K ++LF + MR V V+ +T+ ++S
Sbjct: 333 FDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNN--LTIVGLLS 390
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + LG+E+H +IK +++ + + L+ Y G ++ M +D +S
Sbjct: 391 ACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAIS 450
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT +IS Y +A+++ M +G P+ T +S L ACA L L G K+H
Sbjct: 451 WTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVN 510
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+T S + + ++LIDMY +C +D+A VF +P+ N+++W II G N EAL
Sbjct: 511 KTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLCEEALK 570
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARI 512
+ M + + L ++L++C +
Sbjct: 571 YMYLMQQEGHEVDDFVLSTVLTSCGDL 597
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G QAL+ M +E + ++++ C ++ G LH V K M + +
Sbjct: 259 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 318
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF M R+ +W +I GYA++G ++A+ L+++M +
Sbjct: 319 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMK-MRR 377
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + GKE+H +I+ E ++ + + L+ Y KCG+ A
Sbjct: 378 VFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAA 437
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ISW A+ISGY G ++ L M V P+ T SS + A +
Sbjct: 438 RILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLE 497
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR++HG+V K +V V + LI MY+ G +E VF M ++V+W +I+
Sbjct: 498 ALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIIT 557
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ + L ++A++ +M+ EG D+ +++VL++C L
Sbjct: 558 GFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 597
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
Q E S+P+ +AS L C G D ++H +A+R+ +AN LI Y++
Sbjct: 72 QEGRGESSLPNAEALASSLRDC---GGADGVRRVHAVAVRSLDSLGTFVANNLISAYARF 128
Query: 448 KCIDKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+ A EVF ++P+++V+SWT+++ + L+L + +FF + ++ NS+T V +L
Sbjct: 129 DEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLL 188
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVS 565
+C G+++H ++ G + + + +A+ Y +CG + A F+ RDV
Sbjct: 189 KSCGERCDAKLGQQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVI 247
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
+W ++T Y + G G A F +M+
Sbjct: 248 SWTTMITAYVQHGHGGQALRMFSEMV 273
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/576 (29%), Positives = 280/576 (48%), Gaps = 35/576 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ G +++K M + D + ++++C Y G +H + +
Sbjct: 150 NSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALR 209
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A L M+ K L ++ VF M ++ SW+ +I G + F D L +
Sbjct: 210 MGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKM 269
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M VG GV +Y VL++C +PDL+ G ++H H ++ + D V A + MY
Sbjct: 270 FKEMQKVGVGVSQSIYA--SVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMY 327
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ A+ +FD + S+NAMI+GY + + L+LF + + + D ++LS
Sbjct: 328 AKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLS 387
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+ A V G ++HG K FS ++ V N I MY +E +VF M K
Sbjct: 388 GALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRK 447
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + K + M G PDE T SVL ACA +L+ G+++H
Sbjct: 448 DAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIH 506
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ----IPDKN-------------- 464
++ G+ S I ++L+DMYSKC ID+A ++ ++ I D N
Sbjct: 507 TTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKG 566
Query: 465 ---------VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
++SW +II G + +S +A FF +MM + + P+ T ++L CA + +
Sbjct: 567 IQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLAS 626
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
+ GK+IHAH ++ + +D ++ + L+DMY +CG + + F RD WN ++ G
Sbjct: 627 IGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICG 686
Query: 574 YAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
YA G G A + F M+ + N + L R C
Sbjct: 687 YAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRAC 722
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 265/547 (48%), Gaps = 60/547 (10%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C +R ++ G H+ + + +V + N L +++ G+LG+A +F M RD+ SW
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118
Query: 165 NVLIGGYAK--------------------------AGFFDEALSLYQRMFWV----GGVK 194
N +I GYA +GF +L ++ GV+
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVE 178
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D +F +L+ C + + K G ++H +R GY+ DV +AL+ MY KC L + V
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F MP+++ ISW+A+I+G +N GL +F M++V V +SV+ + + D
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDL 298
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LG ++H + +K F D V + MY N ++ +++F E+ ++ S+ MI+ Y
Sbjct: 299 RLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGY 358
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A+ ++ + DEI+++ L ACA + L G++LH LA ++ I
Sbjct: 359 SQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNI 418
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+AN IDMY KC+ +D+A VF ++ K+ +SW +II N + L M+ +
Sbjct: 419 CVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRS 478
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++P+ T S+L ACA +L G EIH +++G+A + ++ ++L+DMY +CG + A
Sbjct: 479 GMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEA 537
Query: 554 WNQFNS------------------------NERDVS----AWNILLTGYAERGQGALAEE 585
N +R V +WN +++GY R Q A+
Sbjct: 538 EKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQR 597
Query: 586 FFRKMID 592
FF +M++
Sbjct: 598 FFNRMME 604
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 208/419 (49%), Gaps = 37/419 (8%)
Query: 194 KP--DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG----- 246
KP V F V + C + GK+ H H+I G+ V V N L+ +Y+ CG
Sbjct: 44 KPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYA 103
Query: 247 --------------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
D+VRA L F+ MP RD +SWN+M+SG+ + GE +
Sbjct: 104 TKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENL 163
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + +FI M V+ D + S ++ ++ + KLG ++HG ++MG+ DV + L+
Sbjct: 164 ESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALL 223
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDE 399
MY +E VF M K+ +SW+ +I+ C + + L D ++ ++ M+ G +
Sbjct: 224 DMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFL-DGGLKMFKEMQKVGVGVSQ 282
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
ASVL +CA L +L LG +LH A+++ + I+ +DMY+KC + A +F
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDM 342
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG 518
+ N+ S+ ++I G + F AL+ FRK+ +L + ++L L ACA + L G
Sbjct: 343 SENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEG 402
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
++H A + + + + NA +DMY +C + A F+ +D +WN ++ + +
Sbjct: 403 LQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQ 461
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 251/534 (47%), Gaps = 37/534 (6%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L+ LK MQ++ + V + ++++ C G LH+ K+ +
Sbjct: 260 NNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIV 319
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+ K ++ A +F + +L S+N +I GY++ AL L++++
Sbjct: 320 RTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLS-KSS 378
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + LR C V L G ++H + + ++ V NA I MY KC L A
Sbjct: 379 LGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEAC 438
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M ++D +SWNA+I+ + +N E K L + + M ++PD T SV+ A G
Sbjct: 439 RVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKAC--AG 496
Query: 313 DE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM------------ 359
D G E+H ++K+G + + + + L+ MY G +E EK+ +++
Sbjct: 497 DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSE 556
Query: 360 ------ESKDV---------VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
E K + VSW +IS Y + A + M G PD+ T ++
Sbjct: 557 HPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYST 616
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL CA L ++ LG ++H ++ L + I +TL+DMYSKC + + +F + P ++
Sbjct: 617 VLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRD 676
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
++W ++I G + EA+ F M+L N+ PN T VS+L ACA +G + G + +
Sbjct: 677 FVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLD-YF 735
Query: 524 HALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLTG 573
H ++ D L + ++D+ + G ++ A Q E D W LL+
Sbjct: 736 HMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSA 789
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 223/459 (48%), Gaps = 31/459 (6%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL + + ++ DE +L +R C +G EGL LH + +K+ ++ + NAF+
Sbjct: 366 RALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFI 425
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K L A VF +M +D SWN +I + + + L++ M G++PD
Sbjct: 426 DMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLR-SGMEPDE 484
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
YTF VL+ C G L G E+H +++ G ++ + ++L+ MY KCG + A + +
Sbjct: 485 YTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNK 543
Query: 258 M-------------------PK--RDR------ISWNAMISGYFENGEYMKGLMLFIMMR 290
+ PK +DR +SWNA+ISGY + F M
Sbjct: 544 IFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMM 603
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
E+ + PD T S+V+ + LG+++H +VIK DV +C+ L+ MY GN
Sbjct: 604 EMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLH 663
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +F + +D V+W MI Y + ++A++ ++ M MP+ T S+L ACA
Sbjct: 664 DSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACA 723
Query: 411 CLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISW 468
+G ++ G+ H + GL + + ++D+ K ++KALE+ ++P + + + W
Sbjct: 724 HMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIW 783
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+++ ++N + EA +L L P + +LS
Sbjct: 784 RTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLS 822
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 269/529 (50%), Gaps = 24/529 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNL---------VRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+A+ + SMQ + + +L+NL + LC GY S VS
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS------ 266
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
N + ++ K GD+ A VF +M D+D SW ++ GYA G F E L L+ +M
Sbjct: 267 -----NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM- 320
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+G V+ + + DL++GKE+H ++ ++D+ V L+ MY KCG+
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+A+ +F G+ RD ++W+A+I+ + G + L LF M+ + P+ +TL S++ A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ KLG+ +H + +K D+S L+ MY G F+RM S+D+V+W
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWN 500
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++I+ Y P A++ + + PD T+ V+ ACA L +LD G +H L ++
Sbjct: 501 SLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL 560
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
G S + N LIDMY+KC + A +F++ K+ ++W II N + EA+
Sbjct: 561 GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISS 620
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F +M L N PNSVT VS+L A A + A G HA +++G + + N+L+DMY +
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
CG++ + FN + +D +WN +L+GYA G G A F M +S+
Sbjct: 681 CGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 283/541 (52%), Gaps = 13/541 (2%)
Query: 59 ATKNP-----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
+T NP NS + + +AL+ M E + D+ +++ C E
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G++ H + + V +G + M+ K GDL A VF KM RD+ +WN +I G ++
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ EA+ ++ M VG V+P + + + +++ + +H +V R + + V
Sbjct: 208 SEDPCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
N LI +Y KCGD+ AR VFD M +D +SW M++GY NG +++ L LF M+
Sbjct: 267 --NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 294 VDPDFMT-LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V + ++ +S+ ++A+E + EK G+E+HG ++ D+ V PL+ MY G E+
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEK-GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKA 383
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+++F ++ +D+V+W+ +I+ + P++A+ +Q M+ + P+ +T+ S+L ACA L
Sbjct: 384 KQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL 443
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L LG +H ++ + S + L+ MY+KC AL F+++ +++++W S+I
Sbjct: 444 SLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + A+ F K+ L+ + P++ T+V ++ ACA + L G IH +++G
Sbjct: 504 NGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFE 563
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRK 589
D + NAL+DMY +CG + A FN + +D WN+++ Y + G A F +
Sbjct: 564 SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ 623
Query: 590 M 590
M
Sbjct: 624 M 624
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 257/480 (53%), Gaps = 10/480 (2%)
Query: 115 LYLHS--VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
L +H+ +VS H S+ ++++ F A VF + WN +I Y
Sbjct: 49 LQIHAQIIVSGFKHHHSI---THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYT 105
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++ ++EAL +Y M G++PD YTF VL+ C G +L+ G H + R G E DV
Sbjct: 106 RSKQYNEALEMYYCMV-EKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDV 164
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ L+ MY K GDL RAR VFD MPKRD ++WNAMI+G ++ + + + F M+ V
Sbjct: 165 FIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV 224
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V+P ++L ++ + + +L R +HGYV + FS VS N LI +Y G+ +
Sbjct: 225 GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVA 282
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF +M +D VSW TM++ Y + + +E + M+ ++++ S A A
Sbjct: 283 RRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAET 342
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+L+ G ++H A++ + S I++A L+ MY+KC +KA ++F + +++++W++II
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
L EAL F++M +KPN VTL+SIL ACA + L GK IH ++ +
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D AL+ MY +CG A FN + RD+ WN L+ GYA+ G A + F K+
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL 522
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 255/504 (50%), Gaps = 6/504 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ D M+ N+ +++ + V+ ++G +H + + +
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ M+ K G+ A +F + RDL +W+ +I + G+ +EALSL+Q M
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQK 425
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T +L C + LK GK +H ++ ++D+ AL++MY KCG A
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ M RD ++WN++I+GY + G+ + +F +R ++PD T+ V+ A L+
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
D G +HG ++K+GF D V N LI MY G+ E +F++ + +KD V+W +I
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + +A+ ++ M E P+ +T SVL A A L G+ H ++ G +
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++ N+LIDMY+KC +D + ++F+++ K+ +SW +++ G ++ A+ F M
Sbjct: 666 SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ ++ +SV+ VS+LSAC G + G++I H+ + + + D ++D+ R G
Sbjct: 726 QESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL 785
Query: 550 MKPAWN--QFNSNERDVSAWNILL 571
+ E D W LL
Sbjct: 786 FDETLGFIKVMPVEPDAGVWGALL 809
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 202/415 (48%), Gaps = 8/415 (1%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L G E+AL MQ + + L++++ C G +H K
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ G A +SM+ K G A F +M RD+ +WN LI GYA+ G A+ ++ ++
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-R 523
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ + PD T V+ C + DL +G +H +++ G+E+D V NALI MY KCG L
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 250 RARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A +F+ +D ++WN +I+ Y +NG + + F MR P+ +T SV+ A+
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + G H +I+MGF + V N LI MY G + EK+F+ M+ KD VSW
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWN 703
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMR 427
M+S Y D+A+ + +M+ D ++ SVLSAC G ++ G K+ H ++ +
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDK 763
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKAL---EVFHQIPDKNVISWTSIILGLRLNN 479
+ + ++D+ + D+ L +V PD V W +++ R+++
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGV--WGALLGSCRMHS 816
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 205/414 (49%), Gaps = 14/414 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA--LITMYVKCGDLVRARLVFDG 257
+P +L +C + L ++H +I G++ + + L +++ KC DL AR VFD
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITHLINLYSLFHKC-DL--ARSVFDS 88
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
P RI WN+MI Y + +Y + L ++ M E ++PD T + V+ A + + G
Sbjct: 89 TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEG 148
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
HG + + G DV + L+ MY G+ + +VF +M +DVV+W MI+ S
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
P +AV+ ++ M+ G P +++ ++ L N++L +H R S ++
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVS 266
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
N LID+YSKC +D A VF Q+ D++ +SW +++ G N E L F KM L N++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N V+ VS A A L GKEIH AL+ + D + L+ MY +CG + A
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F RD+ AW+ ++ + G A F++M + K N LM + C
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 269/529 (50%), Gaps = 24/529 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNL---------VRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+A+ + SMQ + + +L+NL + LC GY S VS
Sbjct: 213 EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS------ 266
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
N + ++ K GD+ A VF +M D+D SW ++ GYA G F E L L+ +M
Sbjct: 267 -----NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM- 320
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+G V+ + + DL++GKE+H ++ ++D+ V L+ MY KCG+
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+A+ +F G+ RD ++W+A+I+ + G + L LF M+ + P+ +TL S++ A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ KLG+ +H + +K D+S L+ MY G F+RM S+D+V+W
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWN 500
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++I+ Y P A++ + + PD T+ V+ ACA L +LD G +H L ++
Sbjct: 501 SLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL 560
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
G S + N LIDMY+KC + A +F++ K+ ++W II N + EA+
Sbjct: 561 GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISS 620
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F +M L N PNSVT VS+L A A + A G HA +++G + + N+L+DMY +
Sbjct: 621 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
CG++ + FN + +D +WN +L+GYA G G A F M +S+
Sbjct: 681 CGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 729
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 283/541 (52%), Gaps = 13/541 (2%)
Query: 59 ATKNP-----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
+T NP NS + + +AL+ M E + D+ +++ C E
Sbjct: 88 STPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQE 147
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G++ H + + V +G + M+ K GDL A VF KM RD+ +WN +I G ++
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ EA+ ++ M VG V+P + + + +++ + +H +V R + + V
Sbjct: 208 SEDPCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS 266
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
N LI +Y KCGD+ AR VFD M +D +SW M++GY NG +++ L LF M+
Sbjct: 267 --NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 294 VDPDFMT-LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V + ++ +S+ ++A+E + EK G+E+HG ++ D+ V PL+ MY G E+
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEK-GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKA 383
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+++F ++ +D+V+W+ +I+ + P++A+ +Q M+ + P+ +T+ S+L ACA L
Sbjct: 384 KQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL 443
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L LG +H ++ + S + L+ MY+KC AL F+++ +++++W S+I
Sbjct: 444 SLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI 503
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + A+ F K+ L+ + P++ T+V ++ ACA + L G IH +++G
Sbjct: 504 NGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFE 563
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRK 589
D + NAL+DMY +CG + A FN + +D WN+++ Y + G A F +
Sbjct: 564 SDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ 623
Query: 590 M 590
M
Sbjct: 624 M 624
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 257/480 (53%), Gaps = 10/480 (2%)
Query: 115 LYLHS--VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
L +H+ +VS H S+ ++++ F A VF + WN +I Y
Sbjct: 49 LQIHAQIIVSGFKHHHSI---THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYT 105
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++ ++EAL +Y M G++PD YTF VL+ C G +L+ G H + R G E DV
Sbjct: 106 RSKQYNEALEMYYCMV-EKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDV 164
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ L+ MY K GDL RAR VFD MPKRD ++WNAMI+G ++ + + + F M+ V
Sbjct: 165 FIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV 224
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V+P ++L ++ + + +L R +HGYV + FS VS N LI +Y G+ +
Sbjct: 225 GVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVA 282
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF +M +D VSW TM++ Y + + +E + M+ ++++ S A A
Sbjct: 283 RRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAET 342
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+L+ G ++H A++ + S I++A L+ MY+KC +KA ++F + +++++W++II
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
L EAL F++M +KPN VTL+SIL ACA + L GK IH ++ +
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D AL+ MY +CG A FN + RD+ WN L+ GYA+ G A + F K+
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL 522
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 254/504 (50%), Gaps = 6/504 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ D M+ N+ +++ + V+ ++G +H + + +
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ M+ K G+ A +F + RDL +W+ +I + G+ +EALSL+Q M
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQK 425
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T +L C + LK GK +H ++ ++D+ AL++MY KCG A
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ M RD ++WN++I+GY + G+ + +F +R ++PD T+ V+ A L+
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
D G +HG ++K+GF D V N LI MY G+ E +F++ + +KD V+W +I
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + +A+ ++ M E P+ +T SVL A A L G+ H ++ G +
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++ N+LIDMY+KC + + ++F+++ K+ +SW +++ G ++ A+ F M
Sbjct: 666 SNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ ++ +SV+ VS+LSAC G + G++I H+ + + + D ++D+ R G
Sbjct: 726 QESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL 785
Query: 550 MKPAWN--QFNSNERDVSAWNILL 571
+ E D W LL
Sbjct: 786 FDETLGFIKVMPVEPDAGVWGALL 809
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 200/413 (48%), Gaps = 4/413 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L G E+AL MQ + + L++++ C G +H K
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ G A +SM+ K G A F +M RD+ +WN LI GYA+ G A+ ++ ++
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-R 523
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ + PD T V+ C + DL +G +H +++ G+E+D V NALI MY KCG L
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 250 RARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A +F+ +D ++WN +I+ Y +NG + + F MR P+ +T SV+ A+
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + G H +I+MGF + V N LI MY G EK+F+ M+ KD VSW
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWN 703
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMR 427
M+S Y D+A+ + +M+ D ++ SVLSAC G ++ G K+ H ++ +
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDK 763
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ + ++D+ + D+ L +P + + W +++ R+++
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS 816
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 205/414 (49%), Gaps = 14/414 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA--LITMYVKCGDLVRARLVFDG 257
+P +L +C + L ++H +I G++ + + L +++ KC DL AR VFD
Sbjct: 35 YPRLLSSCKHLNPLL---QIHAQIIVSGFKHHHSITHLINLYSLFHKC-DL--ARSVFDS 88
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
P RI WN+MI Y + +Y + L ++ M E ++PD T + V+ A + + G
Sbjct: 89 TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEG 148
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
HG + + G DV + L+ MY G+ + +VF +M +DVV+W MI+ S
Sbjct: 149 VWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
P +AV+ ++ M+ G P +++ ++ L N++L +H R S ++
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVS 266
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
N LID+YSKC +D A VF Q+ D++ +SW +++ G N E L F KM L N++
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N V+ VS A A L GKEIH AL+ + D + L+ MY +CG + A
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F RD+ AW+ ++ + G A F++M + K N LM + C
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 240/461 (52%), Gaps = 6/461 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L VK G LG+A +F KM +D SW LI GY A EAL L++ M G+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + + CG D+ G+ +H + ++ G V V +AL+ MY K G + R
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP R+ +SW A+I+G G + L+ F M V+ D T + + A G
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H +K GF V N L MY G E G +F +M +DVVSWTT+I+
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITT 292
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ AV+ + M P+E T A+V+S CA L ++ G +LH L + GL +
Sbjct: 293 LVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAAS 352
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRK 490
+ + N+++ MY+KC + + +FH++ ++++SW++II G + +FE L + R
Sbjct: 353 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR- 411
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M KP L S+LSAC + L GK++HA+ L IG+ + +AL++MY +CG +
Sbjct: 412 -MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 551 KPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F++ E D+ +W ++ GYAE G + F K+
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKI 511
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 289/621 (46%), Gaps = 44/621 (7%)
Query: 10 SQTPLRQNLRN-PKTRIPETSFYFKP--KTRHFSS------KNAQSVQVLNTQNTSSIAT 60
S L QN+ +T +PE++ K KT H + K +Q ++ T S
Sbjct: 33 SNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVN 92
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
N +S L N +E L+ +D L + C + G LH
Sbjct: 93 ANDSSEALLLFKNMRVESGLR-----------IDPFILSLAHKACGLNSDVNYGELLHGY 141
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
KT SV +G+A L M+ K G + VF +M R++ SW +I G +AG+ EA
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEA 201
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M W V+ D YTF L+ C L G+E+H ++ G++ V N L T
Sbjct: 202 LVYFSEM-WRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLAT 260
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG L +F+ M RD +SW +I+ + G+ + FI MRE V P+ T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++VIS + + G ++H ++ +G + +SV N ++ MY G +F M
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D+VSW+T+I+ Y +A E M EG P E +ASVLSAC + L+ G +
Sbjct: 381 RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH + GL ++ + LI+MY KC I++A +F + +++SWT++I G +
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPN 538
S E + F K+ + L+P+SVT + +LSAC+ G + G +A + + ++
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYG 560
Query: 539 ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT-----GYAERGQGALAEEFFR--- 588
++D+ R GR+ A + + RD W+ LL G ERG+ AE +
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRT-AERILQLEP 619
Query: 589 ----------KMIDSKGNWRK 599
+ SKG WR+
Sbjct: 620 NCAGTHITLANIYASKGKWRE 640
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 203/400 (50%), Gaps = 8/400 (2%)
Query: 197 VYTFPCVLRT-CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
++T P V T C + L+R + I F + D+ N + VK G L AR +F
Sbjct: 13 LFTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMF 72
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR---EVLVDPDFMTLSSVISASELVG 312
D M ++D ISW +ISGY + + L+LF MR + +DP ++L+ A L
Sbjct: 73 DKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAH--KACGLNS 130
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G +HGY +K G + V V + L+ MY G EG +VF M ++VVSWT +I+
Sbjct: 131 DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIIT 190
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +A+ + M D T A L ACA G L+ G ++H AM+ G
Sbjct: 191 GLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDV 250
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKM 491
+ANTL MY+KC ++ L +F ++ ++V+SWT+II L ++ F R
Sbjct: 251 SSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMR 310
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
++ PN T +++S CA + + G+++HA L +G+A + N+++ MY +CG++
Sbjct: 311 ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLT 370
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ RD+ +W+ ++ GY + G + A E M
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWM 410
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 258/464 (55%), Gaps = 3/464 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EAL LY++M G
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAG 138
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P Y VL +C +G+ +H + G+ +++ V NA+IT+Y++CG A
Sbjct: 139 -VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF MP RD +++N +ISG+ + G L +F M+ + PD +T+SS+++A +
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G ++H Y+ K G S D + L+ +Y+ G+ E +F+ + +VV W M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ K+ E + M+A G P++ T +L C C +DLG ++H L+++TG
Sbjct: 318 VAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK ++KA V + +K+V+SWTS+I G + +AL F++M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S +S CA I A+ G +IHA G + D + NAL+++Y RCGR+
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRI 497
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A++ F E +D N L++G+A+ G A + F +M S
Sbjct: 498 REAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQS 541
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 276/539 (51%), Gaps = 5/539 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + L +++ C + +G +H+ K + +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA ++++++ G A VF M RD ++N LI G+A+ G + AL +++ M + G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SG 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T +L C + DL++G ++H ++ + G +D + +L+ +YVKCGD+ A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F+ + + + WN M+ + + + K LF M+ + P+ T ++
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG ++H +K GF D+ V LI MY +G E+ +V ++ KDVVSWT+MI+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+ ++ M+ G PD I +AS +S CA + + G+++H +G
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKM 491
+ I N L+++Y++C I +A F ++ K+ I+ ++ G + EAL +F R
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+K N T VS LSA A + + GK+IHA ++ G +F+ + NAL+ +Y +CG +
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A +F+ +ER+ +WN ++T ++ G+G A + F +M K N +G+ C
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAAC 658
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 227/441 (51%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E AL+ + MQ + D + +L+ C +G LHS + K +
Sbjct: 223 GHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIME 282
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ + + ++ L+ +M G+
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQM-QAAGI 341
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +T+PC+LRTC ++ G+++H ++ G+E+D+ V LI MY K G L +AR
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + + ++D +SW +MI+GY ++ L F M++ + PD + L+S IS +
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H + G+S DVS+ N L+ +Y G E F ME KD ++ ++S
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSG 521
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L ++A++ + M+ G + T S LSA A L + G ++H ++TG
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE 581
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ N LI +Y KC + A F ++ ++N +SW +II + R EAL F +M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKK 641
Query: 494 N-LKPNSVTLVSILSACARIG 513
+KPN VT + +L+AC+ +G
Sbjct: 642 EGIKPNDVTFIGVLAACSHVG 662
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 216/424 (50%), Gaps = 22/424 (5%)
Query: 191 GGVKPDVYTFPCVLRTCGG-------VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
GG+ P F C LR C G VP E+H + G V N LI +Y
Sbjct: 37 GGLGP--LDFACALRACRGNGRRWQVVP------EIHAKAVTRGLGKYRIVGNLLIDLYS 88
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G ++ AR VF+ + RD +SW AM+SGY +NG + L L+ M V P LSS
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+S+ GR +H K GF ++ V N +I +YL G+ E+VF M +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V++ T+IS + + A+E ++ M+ G PD +TI+S+L+ACA LG+L G +LH
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNN--R 480
+ G+ S I+ +L+D+Y KC ++ AL +F+ NV+ W +++ ++N+ +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
SFE +F + ++PN T IL C + G++IH+ +++ G D ++ L
Sbjct: 329 SFE--LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVL 386
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+DMY + G ++ A E+DV +W ++ GY + A F++M G W
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM-QKCGIWPD 445
Query: 600 LMGL 603
+GL
Sbjct: 446 NIGL 449
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 249/456 (54%), Gaps = 4/456 (0%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+S+F KFG A VF + + +++++ GYAK +AL + RM V+
Sbjct: 86 ISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMM-CDEVRLV 144
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
V + C+L+ CG DLK+G+E+H +I G+E+++ V+ A++++Y KC + A +F+
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +D +SW +++GY +NG + L L + M+E PD +TL S++ A + ++
Sbjct: 205 RMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRI 264
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR +HGY + GF V+V N L+ MY G+ VF M SK VVSW TMI
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQ 324
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ ++A T+ M EG +P +T+ VL ACA LG+L+ G +H+L + L S + +
Sbjct: 325 NGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSV 384
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
N+LI MYSKCK +D A +F+ + NV +W ++ILG N EAL F M +
Sbjct: 385 MNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGI 443
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
K + TLV +++A A K IH A+R + + F+ AL+DMY +CG +K A
Sbjct: 444 KLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARK 503
Query: 556 QFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ER V WN ++ GY G G + F +M
Sbjct: 504 LFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEM 539
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 249/490 (50%), Gaps = 14/490 (2%)
Query: 73 NGSLEQALKYLDSM--QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
N SL AL + M E+ + V + A L++LC +G +H ++ ++
Sbjct: 123 NSSLGDALCFFLRMMCDEVRLVVGDYAC--LLQLCGENLDLKKGREIHGLIITNGFESNL 180
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ A +S++ K + +A+ +F +M +DL SW L+ GYA+ G AL L +M
Sbjct: 181 FVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQM-QE 239
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G KPD T +L + L+ G+ +H + R G+E+ V+V NAL+ MY KCG
Sbjct: 240 AGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARI 299
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARLVF GM + +SWN MI G +NGE + F+ M + P +T+ V+ A
Sbjct: 300 ARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACAN 359
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+GD + G VH + K+ +VSV N LI MY + +F+ +E K V+W M
Sbjct: 360 LGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAM 418
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y + +A+ + MM+++G D T+ V++A A +H LA+R +
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++ L+DMY+KC I A ++F + +++VI+W ++I G + E L F +
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538
Query: 491 MMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
M +KPN +T +S++SAC+ G L+ K + + D + +A++D+
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQ-EDYYLEPTMDHY--SAMVDLLG 595
Query: 546 RCGRMKPAWN 555
R G++ AWN
Sbjct: 596 RAGQLDDAWN 605
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 185/360 (51%), Gaps = 7/360 (1%)
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I+ G+ + +I+++ K G A VF+ + + + ++ M+ GY +N
Sbjct: 70 IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDA 129
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVG---DEKLGREVHGYVIKMGFSDDVSVCNPL 339
L F+ M + D + + +L G D K GRE+HG +I GF ++ V +
Sbjct: 130 LCFFLRM---MCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAV 186
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ +Y + K+F RM+ KD+VSWTT+++ Y + +A++ M+ G PD
Sbjct: 187 MSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDS 246
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T+ S+L A A + L +G +H A R+G S + + N L+DMY KC A VF
Sbjct: 247 VTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKG 306
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCG 518
+ K V+SW ++I G N S EA F KM+ + P VT++ +L ACA +G L G
Sbjct: 307 MRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERG 578
+H ++ + + + N+L+ MY +C R+ A + FN+ E+ WN ++ GYA+ G
Sbjct: 367 WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNG 426
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 3/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++AL+ + MQE D LV+++ + G +H ++ V +
Sbjct: 224 NGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNV 283
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K G A VF M + + SWN +I G A+ G +EA + + +M G
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGE 343
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P T VL C + DL+RG VH + + +++V V+N+LI+MY KC + A
Sbjct: 344 V-PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAA 402
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ + K + ++WNAMI GY +NG + L LF MM+ + D TL VI+A
Sbjct: 403 SIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFS 461
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ + +HG ++ ++V V L+ MY G + K+F M+ + V++W MI
Sbjct: 462 VNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMID 521
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + + ++ + M+ P++IT SV+SAC+ G ++ G+ L + +
Sbjct: 522 GYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLE 581
Query: 433 YIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ + ++D+ + +D A ++P K IS +LG
Sbjct: 582 PTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLG 624
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 153/305 (50%), Gaps = 21/305 (6%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P + L + S EL ++ ++IK GF ++ +I ++ FG+ E +V
Sbjct: 49 PSVVLLENCTSKKELY-------QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARV 101
Query: 356 FSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC---AC 411
F +E K V + M+ Y + S L D +M M DE+ + AC C
Sbjct: 102 FEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRM------MCDEVRLVVGDYACLLQLC 155
Query: 412 LGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
NLDL G ++H L + G S + + ++ +Y+KC+ ID A ++F ++ K+++SWT
Sbjct: 156 GENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWT 215
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+++ G N + AL +M KP+SVTLVSIL A A + AL G+ IH +A R
Sbjct: 216 TLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS 275
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G + NALLDMY +CG + A F + V +WN ++ G A+ G+ A F
Sbjct: 276 GFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATF 335
Query: 588 RKMID 592
KM+D
Sbjct: 336 LKMLD 340
>gi|225459405|ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Vitis vinifera]
Length = 595
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 258/467 (55%), Gaps = 10/467 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+VV K + + + N +S + +FG L A VF KM +R++ SW ++ GY++ GF
Sbjct: 85 VHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRYGF 144
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
DEAL L+ GV+ + TF CVL C D + G+++H +++ + ++ V +
Sbjct: 145 DDEALRLFDDCI-ENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWR-NLIVDS 202
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ Y +CGDL A FD MP+RD + W MI+ + G + L +F M P
Sbjct: 203 ALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSSP 262
Query: 297 DFMTLSSVISASELVGDEK---LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ T+ SV+ A G+EK G+++HG +IK F +DV + L+ MY G +
Sbjct: 263 NEFTVCSVLKA---CGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSR 319
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF M+ ++ V+WT++I+ Y + ++A+ +++M+ + +T+ S+L AC
Sbjct: 320 KVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTR 379
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
NL +G ++H M+ + S I I +TL+ Y KC+ A +V +P ++V+SWT+II
Sbjct: 380 NLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIIS 439
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G EAL F ++M+ ++PN T S L ACA + A++ GK IH+ +
Sbjct: 440 GYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALS 499
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ F+ +AL++MY +CG + A F+S +R++ +W ++ GYA G
Sbjct: 500 NVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNG 546
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 239/437 (54%), Gaps = 3/437 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL+ D E + + V ++ LC + ++ G +H+ + K + ++ + +A
Sbjct: 146 DEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKD-NWRNLIVDSAL 204
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + + GDL A++ F +M +RD+ W +I ++ G EALS++ +M + P+
Sbjct: 205 VCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMF-NTSSPN 263
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T VL+ CG L+ GK++H +I+ ++ DV + +L+ MY KCG+++ +R VFD
Sbjct: 264 EFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVFD 323
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
GM KR+ ++W ++I+GY NG+ + + LF +M+ + + +T+ S++ A + +
Sbjct: 324 GMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTRNLLM 383
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+EVH ++K ++ + + L+ Y KV M +DVVSWT +IS Y
Sbjct: 384 GKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTS 443
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+E + M EG P+ T +S L ACA L + G +H +T +S + +
Sbjct: 444 LGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFV 503
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNL 495
+ LI+MY+KC + +A++VF +P +N++SW ++I+G N EAL + +R +
Sbjct: 504 GSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGI 563
Query: 496 KPNSVTLVSILSACARI 512
+ + L ++LSAC +
Sbjct: 564 EVDDYILTTVLSACGDV 580
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 206/405 (50%), Gaps = 8/405 (1%)
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
VG V ++ F L++C V +++R VH V + + V N LI+ Y + G LV
Sbjct: 61 VGHVNANLLAF--WLQSCCTVREVRR---VHAVVFKCLDNSVTYVNNNLISAYSRFGKLV 115
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD MP+R+ +SW A+++GY G + L LF E V + T V++
Sbjct: 116 EARKVFDKMPERNVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCS 175
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D +LGR++H ++K + + + V + L+ Y G+ F +M +DVV WTT
Sbjct: 176 KRLDFELGRQIHACIVKDNWRNLI-VDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTT 234
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ +A+ + M S P+E T+ SVL AC L+ G +LH ++
Sbjct: 235 MITACSQQGRGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKM 294
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ I +L+ MY+KC I + +VF + +N ++WTSII G N + EA+ FR
Sbjct: 295 FKEDVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFR 354
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M + N++T+VSIL AC L+ GKE+HA ++ + + ++ + L+ Y +C
Sbjct: 355 VMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCE 414
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A N RDV +W +++GY G A EF ++M++
Sbjct: 415 EHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEMLE 459
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 5/294 (1%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R VH V K + V N LI Y FG E KVF +M ++VVSWT +++ Y
Sbjct: 83 RRVHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRY 142
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
D+A+ + G + T VL+ C+ + +LG ++H ++ + +I+
Sbjct: 143 GFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVKDNWRN-LIVD 201
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL-K 496
+ L+ Y++C + A F Q+P+++V+ WT++I R EAL F +MM N
Sbjct: 202 SALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSS 261
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN T+ S+L AC AL GK++H ++ D F+ +L+ MY +CG + +
Sbjct: 262 PNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKV 321
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
F+ +R+ W ++ GYA GQG A FR M K N ++ + R C
Sbjct: 322 FDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRAC 375
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A+ M+ I + +V+++R C R G +H+ + K ++ +
Sbjct: 343 NGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYI 402
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+ + + K + A V M RD+ SW +I GY G EAL + M G
Sbjct: 403 GSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEML-EEG 461
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ +T+ L+ C + + +GK +H V + ++V V +ALI MY KCG + A
Sbjct: 462 VEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGSALINMYAKCGYVSEAI 521
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
VFD MP+R+ +SW AMI GY NG + L L M+ ++ D L++V+SA
Sbjct: 522 QVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSA 576
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 9/181 (4%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
FY K + F+SK Q++ + + + ++I + + G +AL++L M E
Sbjct: 409 FYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSL--------GHEPEALEFLKEMLEE 460
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
+ + + ++ C +G +HS V+KT++ +V +G+A ++M+ K G + A
Sbjct: 461 GVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGSALINMYAKCGYVSEA 520
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
VF M R+L SW +I GYA+ G EAL L RM G++ D Y VL CG
Sbjct: 521 IQVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRM-QAEGIEVDDYILTTVLSACGD 579
Query: 210 V 210
V
Sbjct: 580 V 580
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 245/445 (55%), Gaps = 3/445 (0%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F M +++ SWN L+ GYA+ G + L L+ +M K +T VL+ C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECE-TKFSKFTLSTVLKGCA 62
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
L+ GK +H +R G E D + +L+ MY KCG + A VF + D ++W+A
Sbjct: 63 NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MI+G + G + LF +MR P+ TLSS++S + +GD + G+ +HG + K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F D V NPLI MY+ E+G KVF M + D+VSW ++S + S + +
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M EG P+ T SVL +C+ L + + G ++H ++ + L+DMY+K +
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
C++ A F ++ ++++ SWT II G +++ +A+ +FR+M +KPN TL S LS
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
C+ + L G+++HA A++ G D F+ +AL+D+Y +CG M+ A F RD+ +
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422
Query: 567 WNILLTGYAERGQGALAEEFFRKMI 591
WN +++GY++ GQG A E FR M+
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMML 447
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 244/458 (53%), Gaps = 2/458 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ LN G ++ LK M+E + L +++ C EG LH++ +
Sbjct: 20 NALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALR 79
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + LG + + M+ K G + A VF K+ + D+ +W+ +I G + G EA L
Sbjct: 80 SGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAEL 139
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G +P+ +T ++ T + DL+ G+ +H + ++G+E+D V N LI MY+
Sbjct: 140 FHLM-RRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM 198
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K + VF+ M D +SWNA++SG++++ +G +F M P+ T S
Sbjct: 199 KSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFIS 258
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + + D + G++VH ++IK DD V L+ MY E+ F R+ ++D
Sbjct: 259 VLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRD 318
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ SWT +IS Y + +KAV+ ++ M+ EG P+E T+AS LS C+ + L+ G +LH
Sbjct: 319 IFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHA 378
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+A++ G I + + L+D+Y KC C++ A +F + ++++SW +II G + + +
Sbjct: 379 VAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEK 438
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
AL FR M+ + P+ T + +LSAC+ +G + GK+
Sbjct: 439 ALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 262/482 (54%), Gaps = 4/482 (0%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+GL LH+ ++ V GN ++ + G G A VF +M RD+ SWN L+ +
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
FD+A M GV +V + V+ CG + G VH V++ G ++ V
Sbjct: 154 ANKMFDDARQALLSMM-RSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIV 212
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
++ NAL+ MY K G + + VF+GMP+R+ +SWN+ I + G Y L LF M E
Sbjct: 213 NLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSER 272
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P +TLSS++ A +G LGREVHGY IK D+ V N L+ MY FG+ E+
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKA 332
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF ++E ++VVSW MI+ + +A M+ +G P+ IT+ ++L AC+ +
Sbjct: 333 CAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRM 392
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+L G ++H ++RTGL+ + I+N LIDMY+KC + A +F + +K+ +S+ ++I
Sbjct: 393 ASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLI 451
Query: 473 LGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
LG + SFE+L F+++ + ++ ++++ + L+AC + + GKEIH +R ++
Sbjct: 452 LGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLS 511
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
FL N LL +Y + G + A FN E+DV++WN ++ GY GQ A F M
Sbjct: 512 NHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLM 571
Query: 591 ID 592
D
Sbjct: 572 KD 573
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 232/421 (55%), Gaps = 4/421 (0%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK--RG 216
R F WN L + A EAL +Y M GV PD TFP L +G
Sbjct: 37 RSAFLWNSLSRALSSASLPTEALLVYNHML-RSGVSPDDRTFPFALHAAAAAAQAHPAKG 95
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
E+H +R G+ ADV N L+ Y CG AR VFD MP RD +SWN+++S + N
Sbjct: 96 LELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLAN 155
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + M V + +L SV+ A + + G VHG V+K G V++
Sbjct: 156 KMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLG 215
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY FG+ E KVF M ++ VSW + I C+ + L + ++ M G M
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P IT++S+L A LG DLG ++H +++ + I +AN+L+DMY+K ++KA V
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGAL 515
F +I +NV+SW ++I L N EA KM + + PNS+TLV++L AC+R+ +L
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASL 395
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYA 575
GK+IHA ++R G+ FD F+ NAL+DMY +CG+++ A + F+ +E+D ++N L+ GY+
Sbjct: 396 KTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDVSYNTLILGYS 455
Query: 576 E 576
+
Sbjct: 456 Q 456
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 252/488 (51%), Gaps = 3/488 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N + A + L SM + V+ +LV++V C ++ GL +H +V K
Sbjct: 146 NSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLK 205
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T V LGNA + M+ KFG + + VF M +R+ SWN IG + AG + + L+L
Sbjct: 206 TGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLAL 265
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G P T +L + G+EVH + I+ E D+ V N+L+ MY
Sbjct: 266 FRGMS-ERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYA 324
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L +A VF+ + R+ +SWNAMI+ +NG + L I M++ P+ +TL +
Sbjct: 325 KFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVN 384
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + K G+++H + I+ G D+ + N LI MY G + +F E KD
Sbjct: 385 LLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSE-KD 443
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ T+I Y S +++ ++ + + G D I+ L+AC L + G ++H
Sbjct: 444 DVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHG 503
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +R L ++ +ANTL+ +Y+K +D A ++F++I +K+V SW ++I+G ++ +
Sbjct: 504 VLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDA 563
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F M + + V+ +++LS C+ G + GK+ +H L + ++D
Sbjct: 564 AFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVD 623
Query: 543 MYVRCGRM 550
+ R G++
Sbjct: 624 LLGRSGQL 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 4/397 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+D G +H K L + + N+ + M+ KFG L A VF K+ R++ SWN +I
Sbjct: 294 FDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIAN 353
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ G EA L +M G P+ T +L C + LK GK++H IR G
Sbjct: 354 LVQNGAESEAFGLVIKM-QKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMF 412
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ + NALI MY KCG L A+ +FD + ++D +S+N +I GY ++ + L LF +
Sbjct: 413 DLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLS 471
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V ++ D ++ ++A + K G+E+HG +++ S+ + N L+ +Y G +
Sbjct: 472 SVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLD 531
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
K+F+R++ KDV SW MI Y D A + +M+ G D ++ +VLS C+
Sbjct: 532 TASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCS 591
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
G ++ G K + L + ++D+ + + +++E+ +P N W
Sbjct: 592 HGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWG 651
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+++ R++ + E + + LKP S+L
Sbjct: 652 ALLGACRIHG-NIELAQYAADHLFELKPEHSGYYSVL 687
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 228/417 (54%), Gaps = 3/417 (0%)
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
AL+ + M G P + TF +L+ C DL G+ VH + G + AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD-PDF 298
MY KC AR VFD MP RDR++WNA+++GY NG + + + M+E + PD
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+TL SV+ A REVH + ++ GF + V+V ++ +Y G + KVF
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M+ ++ VSW MI Y + +A+ ++ M EG ++++ + L AC LG LD G
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H+L +R GL S + + N LI MY KCK D A +VF ++ K +SW ++ILG N
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507
Query: 479 NRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
S +A+ F +M L N+KP+S TLVSI+ A A I + + IH +++R+ + D ++
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
AL+DMY +CGR+ A + FNS +R V WN ++ GY G G +A E F +M S
Sbjct: 568 TALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSS 624
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 246/504 (48%), Gaps = 14/504 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
+L++LC + G +H+ ++ A +M+ K G A VF +M
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD +WN L+ GYA+ G + A+ + RM G +PD T VL C L +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EVH +R G++ V+V A++ +Y KCG + AR VFDGM R+ +SWNAMI GY ENG
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + L LF M VD +++ + + A +G GR VH ++++G +V+V N
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSM 396
LI MY + +VF + K VSW MI C + D AV + M+ E
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSED-AVRLFSRMQLENVK 526
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T+ S++ A A + + +H ++R L + + LIDMY+KC + A +
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGAL 515
F+ D++VI+W ++I G + A+ F +M + K PN T +S+LSAC+ G +
Sbjct: 587 FNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLV 646
Query: 516 MCGKEIHA-----HALRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWN 568
G+E + + L G+ G ++D+ R G++ AW+ Q E +S +
Sbjct: 647 DEGQEYFSSMKEDYGLEPGMEHYG----TMVDLLGRAGKLHEAWSFIQKMPMEPGISVYG 702
Query: 569 ILLTGYAERGQGALAEEFFRKMID 592
+L LAEE +++ +
Sbjct: 703 AMLGACKLHKNVELAEESAQRIFE 726
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +AL M + V + +++ + C DEG +H ++ +
Sbjct: 397 NAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + NA ++M+ K A VF ++ + SWN +I G + G ++A+ L
Sbjct: 457 IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRL 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM + VKPD +T ++ + D + + +H + IR + DV V+ ALI MY
Sbjct: 517 FSRM-QLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR +F+ R I+WNAMI GY +G + LF M+ P+ T S
Sbjct: 576 KCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635
Query: 304 VISASELVGDEKLGRE 319
V+SA G G+E
Sbjct: 636 VLSACSHAGLVDEGQE 651
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
T S+L CA L G+ +HA G++ + AL +MY +C R A F+
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
RD AWN L+ GYA G A +M + G
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGE 323
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 276/532 (51%), Gaps = 20/532 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ L MQEL I D +L ++ +C Y G +H + + M L
Sbjct: 526 GHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLE 585
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ AW +FGK+ +R ++ +WNV+IGG+ + G ++++L LY +
Sbjct: 586 TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS-LAKNEN 644
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K +F C L G++VH VI+ ++ D V +L+TMY K G + A+
Sbjct: 645 CKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAK 704
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + ++ NAMIS + NG L L+ M+ D T+SS++S +VG
Sbjct: 705 KVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVG 764
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR VH VIK +V++ + L+ MY G+ E+ + VF M+ +DVV+W +MI+
Sbjct: 765 SYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIA 824
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + A++ ++ ME EG D + SV+SA L N++LG +H A++ GL S
Sbjct: 825 GFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLES 884
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ +A +L+DMYSK + A VF +P+KN+++W S+I N +M
Sbjct: 885 DVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNG--------LPEMS 936
Query: 493 LNLKP---------NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+NL P +SV++ ++L A + + AL+ GK +HA+ +R+ + D + NAL+DM
Sbjct: 937 INLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDM 996
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
YV+CG +K A F N R++ WN ++ GY G A F++M S+
Sbjct: 997 YVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSE 1048
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 264/524 (50%), Gaps = 15/524 (2%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
+ L G QAL+ + + +L++ C G +H+ +
Sbjct: 412 EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-----DLFSWNVLIGGYAKAGFFDEA 180
+ + ++M+VK G LG A VF KM + D+ WN +I GY K G F+E
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L+ + RM + G++PD Y+ VL C + G+++H ++IR +E D + ALI
Sbjct: 532 LAQFCRMQEL-GIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIG 590
Query: 241 MYVKCGDLVRARLVFDGMPKRDRI-SWNAMISGYFENGEYMKGLMLFIMMRE---VLVDP 296
MY C + A +F + R I +WN MI G+ ENG + K L L+ + + LV
Sbjct: 591 MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 650
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
F + S E++ GR+VH VIKM F DD VC L+ MY G+ E+ +KVF
Sbjct: 651 SFTGAFTACSHGEVL---DFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVF 707
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
++ K+V MIS + G+ A+ Y M+A + D TI+S+LS C+ +G+ D
Sbjct: 708 DQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYD 767
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H ++ + S + I + L+ MY KC + A VF+ + +++V++W S+I G
Sbjct: 768 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 827
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N R +AL FR M +K +S + S++SA + + G IH A++ G+ D F
Sbjct: 828 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVF 887
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ +L+DMY + G + A F+S +++ AWN +++ Y+ G
Sbjct: 888 VACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNG 931
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 272/547 (49%), Gaps = 15/547 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E++L+ + N + + C D G +H V K +
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L+M+ K G + A VF ++ D+++ N +I + G +AL LY +M G
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGE 745
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
D +T +L C V G+ VH VI+ +++V + +AL+TMY KCG A
Sbjct: 746 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF M +RD ++W +MI+G+ +N + L LF M + V D ++SVISA +
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +LG +HG+ IK G DV V L+ MY FG E E VFS M +K++V+W +MIS
Sbjct: 866 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 925
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
CY + LP+ ++ + G D ++I +VL A + + L G LH +R + S
Sbjct: 926 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPS 985
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + N LIDMY KC C+ A +F +P +N+++W S+I G + EA+ F++M
Sbjct: 986 DLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMK 1045
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
+ P+ VT ++++++C+ G + G + +RI + + + +++D+ R GR
Sbjct: 1046 RSETAPDEVTFLALITSCSHSGMVEEGLNLF-QLMRIEYGVEPRMEHYASVVDLLGRAGR 1104
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQ-----GALAEEFFRKMIDSKG-NWRKLM 601
+ A++ + D S W LL +A R G L + KM ++G N+ L+
Sbjct: 1105 LDDAYSFIRGMPIDADRSVWLCLL--FACRAHRNMELGELVADNLLKMEPARGSNYVPLL 1162
Query: 602 GLFRKCQ 608
L+ + +
Sbjct: 1163 NLYGEVE 1169
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 9/431 (2%)
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I + G + +AL L+ + + +TFP +L+TC + +L G+ +H ++ G
Sbjct: 413 IKALVQQGKYSQALELHSKTPH-SALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-----DRISWNAMISGYFENGEYMKG 282
++D + +LI MYVKCG L A VFD M + D WN +I GYF+ G + +G
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L F M+E+ + PD +LS V+ + GR++HGY+I+ F D + LI M
Sbjct: 532 LAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGM 591
Query: 343 YLSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
Y S E +F ++E++ ++V+W MI + + + +K++E Y + + E +
Sbjct: 592 YSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSAS 651
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+AC+ LD G ++H ++ + +L+ MY+K ++ A +VF Q+
Sbjct: 652 FTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVL 711
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKE 520
DK V ++I N R+++AL + KM P +S T+ S+LS C+ +G+ G+
Sbjct: 712 DKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT 771
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+HA ++ + + + +ALL MY +CG + A + F + ERDV AW ++ G+ + +
Sbjct: 772 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 831
Query: 580 GALAEEFFRKM 590
A + FR M
Sbjct: 832 FKDALDLFRAM 842
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 215/436 (49%), Gaps = 4/436 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG AL + M+ VD + +L+ C YD G +H+ V K
Sbjct: 719 NAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIK 778
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + +A L+M+ K G A VF M +RD+ +W +I G+ + F +AL L
Sbjct: 779 RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 838
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M GVK D V+ G+ +++ G +H I+ G E+DV V +L+ MY
Sbjct: 839 FRAM-EKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 897
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G A +VF MP ++ ++WN+MIS Y NG + L + + D +++++
Sbjct: 898 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 957
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A V G+ +H Y I++ D+ V N LI MY+ G + + +F M ++
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 1017
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+W +MI+ Y ++AV ++ M+ + PDE+T +++++C+ G ++ G+ L Q
Sbjct: 1018 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 1077
Query: 424 LA-MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
L + G+ + +++D+ + +D A +P D + W ++ R +R+
Sbjct: 1078 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRA-HRN 1136
Query: 482 FEALIFFRKMMLNLKP 497
E +L ++P
Sbjct: 1137 MELGELVADNLLKMEP 1152
>gi|255562005|ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538815|gb|EEF40415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 585
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 286/539 (53%), Gaps = 10/539 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+RL G L +A+ LD M + N D L++ C + +G +H+ +++
Sbjct: 44 NTRLINHLKAGHLSKAIIALDVMTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCLTQ 103
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALS 182
+ L + N+ +S++ K G+L A +F M + RDL SW+ LI YA G +A+
Sbjct: 104 SGLELDSVILNSLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYATNGLEFDAIR 163
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITM 241
+Y M V G P+ Y + V+++C + G+ + +I+ GY + V V ALI M
Sbjct: 164 VYIDML-VSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDM 222
Query: 242 YVK-CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y K CGD+ A VFD M +R+ ++W MIS + + G Y + LF M PD T
Sbjct: 223 YAKGCGDVEGACKVFDNMSERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYT 282
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF---GNREEGEKVFS 357
LS V+SA +G LG+E+H + IK G DV V L+ MY G+ ++ KVF
Sbjct: 283 LSGVVSACAELGLLSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFD 342
Query: 358 RMESKDVVSWTTMISCYEGSVLPD-KAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM + +V+SWT +I+ Y + D +A E + M P+ T +S+L ACA L +L
Sbjct: 343 RMTNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLH 402
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG + + A++ G S + N+LI MYS+C ++ A + F + +KN++S+ +I+
Sbjct: 403 LGEQFYAHAVKLGFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYA 462
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
S EA F ++ N+ T S+LS + IGA+ G++IHA L+ +
Sbjct: 463 KGLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNLH 522
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ NAL+ MY RCG ++ A+ FN +R+V +W ++TGYA+ G A E F KM+++
Sbjct: 523 ISNALISMYSRCGDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKMLET 581
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 244/443 (55%), Gaps = 10/443 (2%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D S N + + KAG +A+ M PD+ T+ +L++C + ++GK V
Sbjct: 39 DSHSLNTRLINHLKAGHLSKAIIALDVMTQ-NNTHPDLITYSLLLKSCIRSNNFQKGKLV 97
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKRDRISWNAMISGYFENGE 278
H + + G E D ++N+LI++Y KCG+L A +F M KRD +SW+A+IS Y NG
Sbjct: 98 HNCLTQSGLELDSVILNSLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYATNGL 157
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCN 337
+ ++I M P+ S+VI + + G + G +IK G+ + V V
Sbjct: 158 EFDAIRVYIDMLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVGC 217
Query: 338 PLIKMYL-SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI MY G+ E KVF M +++V+WT MIS ++ A++ + M G M
Sbjct: 218 ALIDMYAKGCGDVEGACKVFDNMSERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFM 277
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC---IDKA 453
PD T++ V+SACA LG L LG +LH A+++GL+ + + +L+DMY+KC +D +
Sbjct: 278 PDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDS 337
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRS-FEALIFFRKMML-NLKPNSVTLVSILSACAR 511
+VF ++ + NV+SWT+II G N RS EA F +M+ ++KPN T SIL ACA
Sbjct: 338 RKVFDRMTNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACAN 397
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ L G++ +AHA+++G A + N+L+ MY RC M+ A F+ E+++ ++N +
Sbjct: 398 LSDLHLGEQFYAHAVKLGFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTI 457
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+ YA+ A E F ++ D+
Sbjct: 458 VEAYAKGLNSEEAFELFNEIEDT 480
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
E Y H+V + SV +GN+ +SM+ + ++ +A F + +++L S+N ++ Y
Sbjct: 405 EQFYAHAV---KLGFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAY 461
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
AK +EA L+ + G V + +TF +L + + +G+++H +++ ++ +
Sbjct: 462 AKGLNSEEAFELFNEIEDTGFV-VNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTN 520
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ + NALI+MY +CGD+ A VF+GM R+ ISW +MI+GY ++G ++ L F M E
Sbjct: 521 LHISNALISMYSRCGDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKMLE 580
Query: 292 VLV 294
++
Sbjct: 581 TVM 583
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 244/488 (50%), Gaps = 57/488 (11%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV--YTFPCVLRTCGGVPDLKR 215
D + +N+ I + + G A+ L + KPD+ T+ VL+ C + ++
Sbjct: 65 DCKITDYNIEICRFCELGNLRRAMELINQ-----SPKPDLELRTYCSVLQLCADLKSIQD 119
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR------------------------- 250
G+ +H + E D + + L+ MYV CGDL
Sbjct: 120 GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAK 179
Query: 251 ------------------------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
AR +FD + RD ISWN+MISGY NG KGL LF
Sbjct: 180 IGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLF 239
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + ++ D T+ SV++ G LGR +HGY IK F ++++ N L+ MY
Sbjct: 240 EQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKS 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
GN +VF M + VVSWT+MI+ Y L D +V + ME EG PD TI ++L
Sbjct: 300 GNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTIL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACAC G L+ G +H + S + ++N L+DMY+KC + A VF ++ K+++
Sbjct: 360 HACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIV 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
SW ++I G N+ EAL F +M N KPNS+T+ IL ACA + AL G+EIH H L
Sbjct: 420 SWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHIL 479
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R G + D + NAL+DMY++CG + A F+ E+D+ +W +++ GY G G+ A
Sbjct: 480 RNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIA 539
Query: 586 FFRKMIDS 593
F +M +S
Sbjct: 540 AFNEMRNS 547
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 172/631 (27%), Positives = 289/631 (45%), Gaps = 83/631 (13%)
Query: 12 TPLRQNLRNPKTRIPETSFYFKP--KTRHFSSKNAQSVQVLNTQ----NTSSIATKNPNS 65
+P Q R P +F+P KT SS S + T T + N
Sbjct: 14 SPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNI 73
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
+ C G+L +A++ ++ + ++ + ++++LC + +G +HS++
Sbjct: 74 EICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSND 131
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ LG+ + M+V GDL +F K+ + +F WN+L+ GYAK G F E+LSL++
Sbjct: 132 VEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFK 191
Query: 186 RMFWVG------------------------------------------------GVKPDV 197
RM +G G+ D+
Sbjct: 192 RMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T V+ C L G+ +H + I+ + ++ + N L+ MY K G+L A VF+
Sbjct: 252 ATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFET 311
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R +SW +MI+GY G + LF M + + PD T+++++ A G + G
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++VH Y+ + D+ V N L+ MY G+ + VFS M+ KD+VSW TMI Y +
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
LP++A+ + M+ S P+ IT+A +L ACA L L+ G ++H +R G +A
Sbjct: 432 SLPNEALNLFVEMQYN-SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLK 496
N L+DMY KC + A +F IP+K+++SWT +I G ++ EA+ F +M ++
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN------------ALLDMY 544
P+ V+ +SIL AC+ H+ L G F + N ++D+
Sbjct: 551 PDEVSFISILYACS-----------HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLL 599
Query: 545 VRCGRMKPAWN--QFNSNERDVSAWNILLTG 573
R G + A+ + E D + W LL G
Sbjct: 600 ARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 205/420 (48%), Gaps = 12/420 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG E+ L + M L I D +V++V C G LH K
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK 279
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L N L M+ K G+L A VF M +R + SW +I GYA+ G D ++ L
Sbjct: 280 ASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL 339
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD++T +L C L+ GK+VH ++ ++D+ V NAL+ MY
Sbjct: 340 FHEM-EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYA 398
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF M +D +SWN MI GY +N + L LF+ M + P+ +T++
Sbjct: 399 KCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMAC 457
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + + G+E+HG++++ GFS D V N L+ MYL G +F + KD
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSWT MI+ Y +A+ + M G PDE++ S+L AC+ G LD G
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN 577
Query: 424 LAMRTGLIS-----YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ I Y I +D+ ++ + KA + +P + + W +++ G R+
Sbjct: 578 MMRNNCCIEPKSEHYACI----VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 633
>gi|225460139|ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 176/580 (30%), Positives = 288/580 (49%), Gaps = 22/580 (3%)
Query: 4 AFCAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP 63
A + TP R +TR+ PK + FS K+A + + + TKNP
Sbjct: 70 AIYSDNQTTPSRPTQTQFRTRLKS------PKKKPFSEKDAFPMSL-------PLHTKNP 116
Query: 64 N---SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
+ S + G L++AL LD + I V+ +L+R C + G +H
Sbjct: 117 HAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVH 176
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFD 178
+ + L + M+ G L A VF + + +++WN L+ G +G +
Sbjct: 177 IRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYR 236
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EALS Y M +G V+ +VY+F C++++ G ++G + H +I+ G + +L
Sbjct: 237 EALSTYSEMRELG-VELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSL 295
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
I MY KCG + ARL+F+ + +RD + W AMI+G+ N + L MR + P+
Sbjct: 296 IDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNS 355
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+ +++++ VG KLGREVH YV+K +S V + + LI MY G+ G +VF
Sbjct: 356 VIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFY 415
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
++ VSWT ++S Y + D+A+ + M+ EG PD +T+A+VL CA L L
Sbjct: 416 ASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQ 475
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H A++ G + + IA +L+ MYSKC +D + ++F + +NVISWT++I
Sbjct: 476 GKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVE 535
Query: 478 NNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N EA+ FR M L+ +P+SV + ILS C + L GKEIH L+ F+
Sbjct: 536 NGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFV 595
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
++ MY + G + A F + + AW ++ Y
Sbjct: 596 SAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYG 635
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 230/465 (49%), Gaps = 3/465 (0%)
Query: 49 VLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK 108
V + ++ S+ T N R N + +AL M+EL + ++ + +++
Sbjct: 208 VFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGA 267
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ +GL H+++ K S L + + M+ K G + A +F ++ +RD+ W +I
Sbjct: 268 TAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMI 327
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-G 227
G+ EAL Y R G+ P+ +L G V K G+EVH +V++
Sbjct: 328 AGFGHNRLQREALE-YLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKS 386
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
Y V + +ALI MY KCGD+ R VF +R+ +SW A++SGY NG + L
Sbjct: 387 YSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIA 446
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M++ PD +T+++V+ + + G+E+H Y +K GF +VS+ L+ MY G
Sbjct: 447 WMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCG 506
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
N + K+F M++++V+SWT MI Y + +AV ++ M+ PD + +A +LS
Sbjct: 507 NLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILS 566
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
C L L LG ++H ++ S ++ +I MY K I KA F IP K ++
Sbjct: 567 ICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMA 626
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
WT+II N+ +A+ F +M + PN T ++LS C R
Sbjct: 627 WTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICER 671
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 220/437 (50%), Gaps = 16/437 (3%)
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I +A+ G EAL++ G+ + TF +LR C L GK++HVH+ G
Sbjct: 123 IQRFARQGKLKEALTILDYCDQ-QGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRING 181
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG--EYMKGLML 285
E + + L+ MY CG L AR VFDG+ + +WNA++ G +G Y + L
Sbjct: 182 LENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALST 241
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
+ MRE+ V+ + + S +I + + G + H +IK G D + LI MY
Sbjct: 242 YSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFK 301
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G + +F + +DVV W MI+ + + L +A+E + M EG P+ + + ++
Sbjct: 302 CGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTI 361
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L +G LG ++H ++T S + I + LIDMY KC + +VF+ ++N
Sbjct: 362 LPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERN 421
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+SWT+++ G N R +AL M +P+ VT+ ++L CA + AL GKEIH+
Sbjct: 422 AVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHS 481
Query: 524 HALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
+A++ +GFLPN +L+ MY +CG + ++ F+ + R+V +W ++ Y E
Sbjct: 482 YAVK-----NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVEN 536
Query: 578 GQGALAEEFFRKMIDSK 594
G A FR M SK
Sbjct: 537 GCLHEAVGVFRSMQLSK 553
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 275/533 (51%), Gaps = 15/533 (2%)
Query: 53 QNTSSIAT------KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE 106
+++S+I T K N L L G L++A +L M + ++ V + L C
Sbjct: 39 RSSSTIXTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACG 98
Query: 107 WKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
R +G +H + +T+ + S + N L M+ G VF +M ++L SW +
Sbjct: 99 KLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVI 158
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I YAK G ++A+ L+ M G++P+ + +L++C G L+ GK++H HVIR
Sbjct: 159 VISAYAKNGELEKAIRLFSDM-QASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRA 217
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
A++ V A+ MYV+CG L A+LVFDGM ++ ++W ++ GY + + L LF
Sbjct: 218 QLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELF 277
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M V+ D S V+ + D +G+++H +++K+G +VSV PL+ Y+
Sbjct: 278 ARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKC 337
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ E + F R+ + VSW+ +IS + S + ++ + + +EG + + SV
Sbjct: 338 GDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVF 397
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA NL++G + H A++ GL+SY+ + ++ MYSKC +D A F I + + +
Sbjct: 398 QACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAV 457
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+WT+II G + + EAL FFR+M ++PN+VT +++L+AC+ G + K+
Sbjct: 458 AWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSM 517
Query: 526 LR---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
R + D + + ++D Y R G + A N E D +W LL G
Sbjct: 518 SRDYGVKPTIDHY--DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 211/428 (49%), Gaps = 3/428 (0%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K G EA + M V +++ C+ CG + L G+ +H +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMD-DADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
R + N L+ MY CG + + VFD M ++ +SW +IS Y +NGE K +
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M+ + P+ S++ + +LG+++H +VI+ + +++V + MY+
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYV 234
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E + VF M++++ V+WT ++ Y + + A+E + M EG DE +
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL C L + D+G ++H ++ G S + + L+D Y KC I+ A F +I + N
Sbjct: 295 VLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW+++I G + R + + F + + NS S+ ACA L G + H
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
A++ G+ + +A++ MY +CGR+ A F S +E D AW +++GYA G A
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474
Query: 583 AEEFFRKM 590
A FFR+M
Sbjct: 475 ALGFFRRM 482
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 270/502 (53%), Gaps = 7/502 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D ALV L+ C R L+ ++ + +R LS + GDL A V
Sbjct: 20 DASALVLLLPACGTLRSL-RALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVL 78
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ--RMFWVGGVKPDVYTFPCVLRTCGGVP 211
D +++ V++G AG +A++L++ R + DV L+ C
Sbjct: 79 DGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADV-VLSLALKACVRSA 137
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D + G+ +H V++ G AD V+N+L+ MY K GDL AR VFD +P+R+ +SW +M+S
Sbjct: 138 DFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLS 196
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G +NG +GL+LF MR+ V P T+ SV++A ++G GR +HG VIK G S
Sbjct: 197 GSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLST 256
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ + L+ MY E+ +VF +E D+V WT MI Y + P A++ + +
Sbjct: 257 NSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKK 316
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+P+ +TIA+V+SA A L +L LG +H + ++ G + ++ N L+DMY+KC+ +
Sbjct: 317 FVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALP 376
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACA 510
+A +F +I K+V++W S++ G N + E+L+ F +M M + P+++++V+ LSAC
Sbjct: 377 EANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACV 436
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ L GK H +A++ + ++ ALL++Y +C + A FN +R+ W+
Sbjct: 437 CLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSA 496
Query: 570 LLTGYAERGQGALAEEFFRKMI 591
++ GY +G A + + F +M+
Sbjct: 497 MIGGYGMQGDSAGSIDLFNEML 518
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 242/464 (52%), Gaps = 11/464 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + M+ K GDL +A VF ++ +R++ SW ++ G + G +E L L+ M V
Sbjct: 161 NSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQ-DNV 219
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P YT VL C + L +G+ +H VI++G + + +L+ MY KC + AR
Sbjct: 220 HPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARR 279
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + D + W AMI GY +N + L LF+ + V + P+ +T+++VISAS +
Sbjct: 280 VFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRH 339
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR VH +K+G + V N L+ MY E +F R+ KDVV+W +M++
Sbjct: 340 LPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAG 399
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + ++++ + M +G PD I++ + LSAC CL +L +G H A++ +S
Sbjct: 400 YSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSN 459
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + L+++YSKC + A VF+ + D+N ++W+++I G + S ++ F +M+
Sbjct: 460 IYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLK 519
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMYVRCGR 549
N+ PN V SILSAC+ G + GKE A I + + ++D+ R G
Sbjct: 520 ENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYA--CMVDVMARAGN 577
Query: 550 MKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A +F N + +S W L G + EE +KM
Sbjct: 578 LEEAL-EFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKM 620
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 203/411 (49%), Gaps = 5/411 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+ L + M++ N+ E +V+++ C G +G ++H V K + +
Sbjct: 201 NGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFI 260
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L M+ K + A VF ++ D+ W +I GY + +AL L+ +V
Sbjct: 261 SASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFV-S 319
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRA 251
+ P+ T V+ + L G+ VH ++ G E+DV V NAL+ MY KC L A
Sbjct: 320 IVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDV-VRNALVDMYAKCQALPEA 378
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F + +D ++WN+M++GY ENG + L+LF MR + PD +++ + +SA +
Sbjct: 379 NSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCL 438
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D +G+ H Y IK F ++ V L+ +Y + ++VF+ M ++ V+W+ MI
Sbjct: 439 ADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMI 498
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
Y +++ + M E P+E+ S+LSAC+ G + G + +A +
Sbjct: 499 GGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNI 558
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR 480
+ ++D+ ++ +++ALE +P K IS W S + G +L++R
Sbjct: 559 TPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSR 609
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 3/211 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG ++L + M+ I D ++VN + C G H+ K
Sbjct: 394 NSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIK 453
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + A L+++ K DL A VF M DR+ +W+ +IGGY G ++ L
Sbjct: 454 YAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDL 513
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
+ M + P+ F +L C + GKE + R F + ++ +
Sbjct: 514 FNEML-KENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVM 572
Query: 243 VKCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ G+L A MP + IS W + + G
Sbjct: 573 ARAGNLEEALEFIQNMPIKAGISVWGSFLHG 603
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 157/498 (31%), Positives = 257/498 (51%), Gaps = 8/498 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
L S + K+ V +G + ++K G++ +A VF + ++ +W +I G K G
Sbjct: 170 LQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L L+ ++ G V PD Y VL C +P L+ GK++H H++R+G+E D ++N
Sbjct: 230 SYVSLQLFYQLM-EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI YVKCG + A +FDGMP ++ ISW ++SGY +N + + + LF M + + P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D SS++++ + + G +VH Y IK +D V N LI MY E KVF
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408
Query: 357 SRMESKDVVSWTTMISCYE--GSVLP-DKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ DVV + MI Y G+ A+ + M P +T S+L A A L
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L L ++H L + GL I + LI +YS C C+ + VF ++ K+++ W S+
Sbjct: 469 SLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFS 528
Query: 474 GLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G + + EAL F ++ L+ +P+ T V +++A + +L G+E H L+ G+
Sbjct: 529 GYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLEC 588
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++ NALLDMY +CG + A F+S RDV WN +++ YA G+G A + KM+
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMM 648
Query: 592 --DSKGNWRKLMGLFRKC 607
+ N+ +G+ C
Sbjct: 649 CEGIEPNYITFVGVLSAC 666
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 260/493 (52%), Gaps = 11/493 (2%)
Query: 109 RGYDEGLYLHSVVSKTMS----HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
R D+ L H+VV + L L N ++++ + G + +A VF KM +R+L +W
Sbjct: 54 RALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTW 113
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK--EVHVH 222
+ ++ GF++E+L ++ + P+ Y ++ C G+ R ++
Sbjct: 114 STMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSF 173
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+++ ++ DV V LI Y+K G++ ARLVFD +P++ ++W MISG + G
Sbjct: 174 LVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L LF + E V PD LS+V+SA ++ + G+++H ++++ G D S+ N LI
Sbjct: 234 LQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDS 293
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y+ G K+F M +K+++SWTT++S Y+ + L +A+E + M G PD
Sbjct: 294 YVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFAC 353
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+S+L++CA L L+ G ++H ++ L + + N+LIDMY+KC C+ +A +VF
Sbjct: 354 SSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAA 413
Query: 463 KNVISWTSIILGLRLNNRSFE---ALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCG 518
+V+ + ++I G +E AL F M L +P+ +T VS+L A A + +L
Sbjct: 414 DDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAER 577
K+IH + G+ D F +AL+ +Y C +K + F+ + +D+ WN + +GY ++
Sbjct: 474 KQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQ 533
Query: 578 GQGALAEEFFRKM 590
+ A F ++
Sbjct: 534 SENEEALNLFLEL 546
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 243/512 (47%), Gaps = 7/512 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ + E N+ D L ++ C + G +H+ + + L N +
Sbjct: 233 SLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLID 292
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+VK G + A +F M ++++ SW L+ GY + EA+ L+ M G +KPD++
Sbjct: 293 SYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFG-LKPDMF 351
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L +C + L+ G +VH + I+ D V N+LI MY KC L AR VFD
Sbjct: 352 ACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIF 411
Query: 259 PKRDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + +NAMI GY G E L +F MR L+ P +T S++ AS +
Sbjct: 412 AADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +++HG + K G + D+ + LI +Y + ++ VF M+ KD+V W +M S Y
Sbjct: 472 LSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYV 531
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++A+ + ++ PDE T +++A L +L LG + H ++ GL
Sbjct: 532 QQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPY 591
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I N L+DMY+KC + A + F ++V+ W S+I + +AL KMM
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEG 651
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++PN +T V +LSAC+ G + G + LR G+ + ++ + R GR+ A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEAR 711
Query: 555 NQFNSNERDVSA--WNILLTGYAERGQGALAE 584
+A W LL+G A+ G LAE
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 200/406 (49%), Gaps = 5/406 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++A++ SM + + D A +++ C + G +H+ K +
Sbjct: 328 NSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYV 387
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF---FDEALSLYQRMFW 189
N+ + M+ K L A VF D+ +N +I GY++ G +AL+++ M +
Sbjct: 388 TNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF 447
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P + TF +LR + L K++H + +FG D+ +ALI +Y C L
Sbjct: 448 -RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLK 506
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+RLVFD M +D + WN+M SGY + E + L LF+ ++ PD T +++A+
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAG 566
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ +LG+E H ++K G + + N L+ MY G+ E+ K F S+DVV W +
Sbjct: 567 NLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y KA++ + M EG P+ IT VLSAC+ G ++ G+K +L +R G
Sbjct: 627 VISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFG 686
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
+ ++ + + +++A E+ ++P K I W S++ G
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSG 732
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 263/485 (54%), Gaps = 10/485 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+++ ++ L ++++V GD+ + F + +++FSWN +I Y + G
Sbjct: 41 LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGK 100
Query: 177 FDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ EA++ ++F + G ++PD YTFP +L+ C + D GK+VH V + G+E DV
Sbjct: 101 YHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVF 157
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +L+ +Y + G L A VF MP +D SWNAMISG+ +NG L + M+
Sbjct: 158 VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEG 217
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V D +T++S++ D G +H +V+K G DV V N LI MY FG ++ +
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF +ME +D+VSW ++I+ YE + P A+ ++ M+ G PD +T+ S+ S + L
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337
Query: 414 NLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + + +R L ++I N L++MY+K ++ A VF Q+P K+ ISW +++
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397
Query: 473 LGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
G N + EA+ + M + PN T VSI+ A + +GAL G +IHA ++ +
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRK 589
D F+ L+D+Y +CGR++ A + F RD S WN ++ G+G A + F+
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517
Query: 590 MIDSK 594
M+ +
Sbjct: 518 MLAER 522
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 259/495 (52%), Gaps = 29/495 (5%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
V C +K G+++ ++ V+ ++ HL + ++G L A VF M +D+
Sbjct: 143 VHCCVFKMGFEDDVF----VAASLVHL-----------YSRYGVLDVAHKVFVDMPVKDV 187
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SWN +I G+ + G AL + RM GVK D T +L C D+ G +H+
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKG-EGVKMDTITVASILPVCAQSDDVINGVLIHL 246
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
HV++ G ++DV V NALI MY K G L A++VFD M RD +SWN++I+ Y +N +
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLI 340
L F M+ + PD +T+ S+ S + D+++ R + G+VI+ + D DV + N L+
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM-EAEGSMPDE 399
MY G VF ++ KD +SW T+++ Y + L +A++ Y MM E ++P++
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQ 426
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T S++ A + +G L G+K+H ++ L + +A LID+Y KC ++ A+ +F++
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
IP + W +II L ++ R EAL F+ M+ +K + +T VS+LSAC+ G + G
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEG 546
Query: 519 K---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
+ +I I + + ++D+ R G ++ A+ + + D S W LL+
Sbjct: 547 QKCFDIMQKEYGIKPSLKHY--GCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Query: 574 ---YAERGQGALAEE 585
Y G LA +
Sbjct: 605 CKIYGNAELGTLASD 619
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 20/403 (4%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H ++ FG ++ + LI +YV GD+ +R FD + K++ SWN++IS Y
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 277 GEYMKGL----MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G+Y + + LF M + PDF T ++ A + D G++VH V KMGF DD
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMM 390
V V L+ +Y +G + KVF M KDV SW MIS C G+ A+ M
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA--GALGVLNRM 213
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ EG D IT+AS+L CA ++ G+ +H ++ GL S + ++N LI+MYSK +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSAC 509
A VF Q+ ++++SW SII NN AL FF+ M L ++P+ +T+VS+ S
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIF 333
Query: 510 ARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAW 567
+++ + I +R + D + NAL++MY + G M A F+ R D +W
Sbjct: 334 SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISW 393
Query: 568 NILLTGYAERGQGALAEEFF------RKMIDSKGNWRKLMGLF 604
N L+TGY + G + A + + R I ++G W ++ +
Sbjct: 394 NTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 198/401 (49%), Gaps = 4/401 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C NG+ AL L+ M+ + +D + +++ +C G+ +H V K
Sbjct: 191 NAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK 250
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + NA ++M+ KFG L A VF +M RDL SWN +I Y + AL
Sbjct: 251 HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMY 242
++ M +GG++PD+ T + + D + + + VIR + + DV + NAL+ MY
Sbjct: 311 FKGM-QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G + A VFD +P++D ISWN +++GY +NG + + + MM E P+ T
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+I A VG + G ++H +IK DV V LI +Y G E+ +F +
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR 489
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
V W +I+ ++A++ ++ M AE D IT S+LSAC+ G +D G K
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ + G+ + ++D+ + ++KA E+ +P
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
A S+ + ++ ++C N++ KLH L + G I+++ LI++Y I
Sbjct: 15 ATTSLHKDADFNALFNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDIS 71
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-----NLKPNSVTLVSIL 506
+ F I KN+ SW SII + EA+ ++ +L+P+ T IL
Sbjct: 72 LSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL 131
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVS 565
AC +L+ GK++H ++G D F+ +L+ +Y R G + A F + +DV
Sbjct: 132 KACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+WN +++G+ + G A A +M
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRM 213
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 276/549 (50%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +++ M + D +L +++ C D G+ +H +V K
Sbjct: 150 NSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVK 209
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A L M+ K L + VF ++ +++ SW+ +I G + E L L
Sbjct: 210 FGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLEL 269
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M VG GV +Y + R+C + L+ GKE+H H ++ + +D+ V A + MY
Sbjct: 270 FKEMQGVGVGVSQSIYA--SLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMY 327
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + A+ V MPK S+NA+I GY + + L F ++ + + D +TLS
Sbjct: 328 AKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLS 387
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++A + + GR+VHG +K ++ V N ++ MY E +F ME +
Sbjct: 388 GALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERR 447
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + ++ + + M PD+ T SVL ACA L+ G+++H
Sbjct: 448 DAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIH 507
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++G+ + L+DMY KC I+KA ++ + K ++SW +II G L +S
Sbjct: 508 TRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSE 567
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+A FF +M+ + + P++ T ++L CA + + GK+IHA ++ + D ++ + L+
Sbjct: 568 DAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLV 627
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG M+ + F + RD WN +L GYA G G A + F M ++ K N
Sbjct: 628 DMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHA 687
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 688 TFVSVLRAC 696
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 265/481 (55%), Gaps = 15/481 (3%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+YL VVS N+ +S + G++ A F +M +RD+ SWN +I G+ +
Sbjct: 110 MYLRDVVSY----------NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G +++ ++ M G V D + VL+ CG + + G +VH V++FG++ DV
Sbjct: 160 GECRKSIDVFLEMGRCG-VGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVT 218
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+AL+ MY KC L + VF +P+++ +SW+AMI+G +N ++GL LF M+ V V
Sbjct: 219 GSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV 278
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+S+ + + +LG+E+H + +K F D+ V + MY G + +K
Sbjct: 279 GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQK 338
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-G 413
V S M + S+ +I Y S +A++++Q++ G DEIT++ L+ACA + G
Sbjct: 339 VLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRG 398
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L+ G ++H LA+++ +S I +AN ++DMY KCK + +A ++F + ++ +SW +II
Sbjct: 399 DLE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIA 457
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N E L F M+ + ++P+ T S+L ACA AL G EIH ++ G+ F
Sbjct: 458 ACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGF 517
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D F+ AL+DMY +CG ++ A + E + + +WN +++G++ Q A +FF +M+
Sbjct: 518 DSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRML 577
Query: 592 D 592
+
Sbjct: 578 E 578
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 249/522 (47%), Gaps = 13/522 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+ L+ MQ + + V + +L R C G LHS K+ + +G A L
Sbjct: 265 EGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATL 324
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G + A V M L S+N +I GYA++ +AL +Q + G + D
Sbjct: 325 DMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTG-LGFDE 383
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T L C + G++VH ++ +++ V NA++ MY KC L A +FD
Sbjct: 384 ITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDM 443
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +RD +SWNA+I+ +NG + L F M ++PD T SV+ A G
Sbjct: 444 MERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTG 503
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
E+H +IK G D V L+ MY G E+ +K+ R E K +VSW +IS +
Sbjct: 504 MEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLL 563
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ A + + M G PD T A+VL CA L + LG ++H ++ L S + I
Sbjct: 564 QQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYIC 623
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
+TL+DMYSKC + + +F + P+++ ++W +++ G + EAL F M L N+K
Sbjct: 624 STLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVK 683
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMK 551
PN T VS+L ACA +G + G H + ++ G P + ++D+ R GR+
Sbjct: 684 PNHATFVSVLRACAHMGLVDKG----LHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRID 739
Query: 552 PAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A N Q E D W LL+ G +AE+ R ++
Sbjct: 740 EALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALL 781
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 216/434 (49%), Gaps = 39/434 (8%)
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK------------ 244
+ TF + + C L GK+ H +I G+E V N L+ MY+K
Sbjct: 49 IRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFD 108
Query: 245 -------------------CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
CG++ AR F MP+RD +SWN++ISG+ +NGE K + +
Sbjct: 109 KMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDV 168
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F+ M V D +L+ V+ A + + +G +VHG V+K GF DV + L+ MY
Sbjct: 169 FLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAK 228
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITI 402
++ VFS + K+ VSW+ MI+ G V D+ VE ++ M+ G +
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIA---GCVQNDRNVEGLELFKEMQGVGVGVSQSIY 285
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
AS+ +CA L L LG +LH A+++ S II+ +DMY+KC + A +V +P
Sbjct: 286 ASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK 345
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
++ S+ +II+G ++R F+AL F+ ++ L + +TL L+ACA I + G+++
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQG 580
H A++ + + NA+LDMY +C + A + F+ E RD +WN ++ + G
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465
Query: 581 ALAEEFFRKMIDSK 594
F MI S+
Sbjct: 466 EETLAHFASMIHSR 479
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 261/488 (53%), Gaps = 5/488 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L +V+ C G +H V +G+A + M+ G LG+A F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ +RD WNV++ G KAG D A+ L++ M G +P+ T C L C DL
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNM-RASGCEPNFATLACFLSVCATDADL 258
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G ++H ++ G E +V V N L+ MY KC L A +F+ MP+ D ++WN MISG
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG +++ LF M+ PD +TL S++ A + K G+EVHGY+++ + DV
Sbjct: 319 VQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV 378
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ + L+ +Y + + ++ + DVV +TMIS Y + + ++A++ ++ + +
Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P+ +TIASVL CA + L LG ++H +R + + L+DMY+KC +D +
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
+F ++ K+ ++W S+I N + EAL FR+M M +K N++T+ + LSACA +
Sbjct: 499 HYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASL 558
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNIL 570
A+ GKEIH ++ + D F +AL+DMY +CG ++ A +F ++ +VS WN +
Sbjct: 559 PAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSI 617
Query: 571 LTGYAERG 578
++ Y G
Sbjct: 618 ISAYGAHG 625
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 255/504 (50%), Gaps = 9/504 (1%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHS--VVSKTMS-HLSVRLGNAFLSMFV---KFGDLGHA 149
D L+ ++R C GL +H+ VVS +S H + L L M+V +F D
Sbjct: 33 DRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF-WVGGVKPDVYTFPCVLRTCG 208
+ + WN LI G+ AG A+ Y +M+ PD +T P V+++C
Sbjct: 93 FSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCA 152
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ + G+ VH G DV V +AL+ MY G L AR FDG+P+RD + WN
Sbjct: 153 ALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNV 212
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
M+ G + G+ + LF MR +P+F TL+ +S D G ++H +K G
Sbjct: 213 MMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG 272
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+V+V N L+ MY ++ ++F M D+V+W MIS + L +A +
Sbjct: 273 LEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFY 332
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ G+ PD IT+ S+L A L L G ++H +R + + + + L+D+Y KC+
Sbjct: 333 DMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCR 392
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+ A ++ +V+ +++I G LN S EAL FR ++ +KPN+VT+ S+L
Sbjct: 393 DVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLP 452
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSA 566
CA + AL G++IH + LR ++ +AL+DMY +CGR+ + F +++D
Sbjct: 453 GCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVT 512
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
WN +++ +++ G+ A + FR+M
Sbjct: 513 WNSMISSFSQNGKPQEALDLFRQM 536
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 256/505 (50%), Gaps = 11/505 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ A++ +M+ + L + +C G LHS+ K V +
Sbjct: 221 GDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVA 280
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L+M+ K L AW +F M DL +WN +I G + G F EA L+ M G
Sbjct: 281 NTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDM-QRSGA 339
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD T +L + LK+GKEVH +++R DV +V+AL+ +Y KC D+ A+
Sbjct: 340 RPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQN 399
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
++D D + + MISGY NG + L +F + E + P+ +T++SV+ +
Sbjct: 400 LYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAA 459
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+++HGYV++ + V + L+ MY G + +F +M KD V+W +MIS
Sbjct: 460 LPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISS 519
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + P +A++ ++ M EG + ITI++ LSACA L + G ++H + ++ + +
Sbjct: 520 FSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKAD 579
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + LIDMY+KC ++ AL VF +PDKN +SW SII + E++ M
Sbjct: 580 IFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQE 639
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNALLDMYVRCGR 549
KP+ VT ++++SACA G + G ++ + I + F ++D+Y R G+
Sbjct: 640 EGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHF--ACMVDLYSRSGK 697
Query: 550 MKPAWNQFNSN---ERDVSAWNILL 571
+ A QF ++ + D W LL
Sbjct: 698 LDKAI-QFIADMPFKPDAGIWGALL 721
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 12/401 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEAD---VDVVNALITMYVKCGDLVRARLVFDGMP 259
VLR C P L G ++H + G +D + + L+ MYV A VF +P
Sbjct: 38 VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 260 KR---DRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDE 314
+ + WN +I G+ G++ ++ ++ M PD TL V+ + +G
Sbjct: 98 RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-C 373
LGR VH +G ++DV V + L+KMY G F + +D V W M+ C
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + D AV ++ M A G P+ T+A LS CA +L G +LH LA++ GL
Sbjct: 218 IKAGDV-DGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPE 276
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +ANTL+ MY+KC+C+D A +F +P ++++W +I G N EA F M
Sbjct: 277 VAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQR 336
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ +P+S+TLVS+L A + L GKE+H + +R V D FL +AL+D+Y +C ++
Sbjct: 337 SGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRM 396
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
A N +++ DV + +++GY G A + FR +++
Sbjct: 397 AQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLE 437
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 212/427 (49%), Gaps = 4/427 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A MQ D LV+L+ G +G +H + + ++ V L
Sbjct: 321 NGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFL 380
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + ++ K D+ A ++ D+ + +I GY G +EAL ++ R
Sbjct: 381 VSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMF-RYLLEQC 439
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T VL C + L G+++H +V+R YE V +AL+ MY KCG L +
Sbjct: 440 IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSH 499
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F M ++D ++WN+MIS + +NG+ + L LF M + + +T+S+ +SA +
Sbjct: 500 YIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLP 559
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+HG IK D+ + LI MY GN E +VF M K+ VSW ++IS
Sbjct: 560 AIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIIS 619
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L ++V M+ EG PD +T +++SACA G ++ G++L Q + LI+
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679
Query: 433 YIIIA-NTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRK 490
+ ++D+YS+ +DKA++ +P K + W +++ R+ +R+ E +
Sbjct: 680 PRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRV-HRNVELADIASQ 738
Query: 491 MMLNLKP 497
+ L P
Sbjct: 739 ELFKLDP 745
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 161/347 (46%), Gaps = 34/347 (9%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LNG E+AL+ + E I + + +++ C G +H V +
Sbjct: 421 LNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCY 480
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ +A + M+ K G L + Y+F KM +D +WN +I +++ G EAL L+++M +
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQM-CME 539
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K + T L C +P + GKE+H I+ +AD+ +ALI MY KCG+L A
Sbjct: 540 GIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELA 599
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ MP ++ +SWN++IS Y +G + + L M+E PD +T ++ISA
Sbjct: 600 LRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISAC--- 656
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
H +++ G V + + K YL + RME + M+
Sbjct: 657 --------AHAGLVEEG----VQLFQCMTKKYL----------IAPRME-----HFACMV 689
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y S DKA++ M + PD ++L AC N++L
Sbjct: 690 DLYSRSGKLDKAIQFIADMPFK---PDAGIWGALLHACRVHRNVELA 733
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 231/423 (54%), Gaps = 6/423 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK---R 215
R F WN L A A EAL +Y RM GV+PD TFP L V + +
Sbjct: 78 RSAFLWNSLSRALASAALPCEALRVYNRMVR-SGVRPDDRTFPFALHAAAAVAQAEHPAK 136
Query: 216 GKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G E+H +R G ADV N L+T Y CG AR VFD MP RD +SWN+++S
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALL 196
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
NG + M V + +L S++ A DE G VHG V+K G + V+
Sbjct: 197 TNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVN 256
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ N L+ MY FG+ E VF+ M+ K+ VSW + I C+ + + +E +++M
Sbjct: 257 LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHD 316
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P +T++S+L A LG LG +LH ++R + S I IANTL+DMY+K C +KA
Sbjct: 317 VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKAS 376
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
+F I +NV+SW ++I L N EA +M N + PNS TLV++L AC+R+
Sbjct: 377 AIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVA 436
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTG 573
++ GK+IHA ++R + D F+ NAL+D+Y +CG++ A F+ +E+D ++N L+ G
Sbjct: 437 SVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVSYNTLIVG 496
Query: 574 YAE 576
Y++
Sbjct: 497 YSQ 499
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 253/462 (54%), Gaps = 4/462 (0%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN ++ + G A VF +M RD+ SWN L+ G ++A M G
Sbjct: 157 GNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMR-SG 215
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V +V + +L CG D G VH V++FG + V++ NAL+ MY K GDL +
Sbjct: 216 VPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSM 275
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+GM +++ +SWN+ I + G + L +F +M E V P +TLSS++ A +G
Sbjct: 276 HVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLG 335
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG+E+HGY I+ D+ + N L+ MY FG E+ +F +E ++VVSW MI+
Sbjct: 336 YFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIA 395
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +A M+ G P+ T+ ++L AC+ + ++ +G ++H ++R L+S
Sbjct: 396 NLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMS 455
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N LID+Y+KC ++ A +F + +K+ +S+ ++I+G + FE+L F++M
Sbjct: 456 DLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMR 514
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L ++ ++V+ + LSAC+ + A GKEIH ++ + FL N+LLD+Y + G +
Sbjct: 515 LAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLD 574
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A FN ++DV++WN ++ GY GQ +A E F M D
Sbjct: 575 TASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKD 616
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 255/488 (52%), Gaps = 3/488 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L NG LE A + + M + V+ +LV+++ C +R GL +H +V K
Sbjct: 189 NSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLK 248
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V LGNA + M+ KFGDL + +VF M +++ SWN IG +A AGF ++ L +
Sbjct: 249 FGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEM 308
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ V P T +L + GKE+H + IR E+D+ + N L+ MY
Sbjct: 309 F-RLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYA 367
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G +A +F+ + R+ +SWNAMI+ +NG + L I M++ P+ TL +
Sbjct: 368 KFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVN 427
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A V K+G+++H + I+ D+ V N LI +Y G +F R E KD
Sbjct: 428 LLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSE-KD 486
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ T+I Y S +++ +Q M G D ++ LSAC+ L G ++H
Sbjct: 487 GVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHG 546
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++ L S+ +AN+L+D+Y+K +D A ++F++I K+V SW ++ILG ++ +
Sbjct: 547 VLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDV 606
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F M + ++ + V+ +++LS C+ G + GK+ + + + ++D
Sbjct: 607 AFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVD 666
Query: 543 MYVRCGRM 550
+ R G++
Sbjct: 667 LLGRAGQL 674
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 4/394 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH + + + N + M+ KFG A +F + R++ SWN +I +
Sbjct: 340 GKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQ 399
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA L M G P+ +T +L C V +K GK++H IR +D+
Sbjct: 400 NGAEAEAFRLVIEM-QKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NALI +Y KCG L AR +FD ++D +S+N +I GY ++ + L LF MR
Sbjct: 459 VSNALIDVYAKCGQLNLARYIFD-RSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAG 517
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ D ++ +SA + K G+E+HG ++K + N L+ +Y G +
Sbjct: 518 IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTAS 577
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K+F+R+ KDV SW TMI Y D A E + +M+ +G D ++ +VLS C+ G
Sbjct: 578 KIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGG 637
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSII 472
+D G K + + + ++D+ + + ++ E+ +P + N W +++
Sbjct: 638 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALL 697
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
R++ E + + LKP + ++L
Sbjct: 698 GSCRIHG-DIELARLAAEHLFELKPENSGYYTLL 730
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 263/485 (54%), Gaps = 10/485 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+++ ++ L ++++V GD+ + F + +++FSWN +I Y + G
Sbjct: 41 LHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGK 100
Query: 177 FDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ EA++ ++F + G ++PD YTFP +L+ C + D GK+VH V + G+E DV
Sbjct: 101 YHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVF 157
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +L+ +Y + G L A VF MP +D SWNAMISG+ +NG L + M+
Sbjct: 158 VAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEG 217
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V D +T++S++ D G +H +V+K G DV V N LI MY FG ++ +
Sbjct: 218 VKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQ 277
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF +ME +D+VSW ++I+ YE + P A+ ++ M+ G PD +T+ S+ S + L
Sbjct: 278 MVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLS 337
Query: 414 NLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + + +R L ++I N L++MY+K ++ A VF Q+P K+ ISW +++
Sbjct: 338 DQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397
Query: 473 LGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
G N + EA+ + M + PN T VSI+ A + +GAL G +IHA ++ +
Sbjct: 398 TGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRK 589
D F+ L+D+Y +CGR++ A + F RD S WN ++ G+G A + F+
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517
Query: 590 MIDSK 594
M+ +
Sbjct: 518 MLAER 522
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 259/495 (52%), Gaps = 29/495 (5%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
V C +K G+++ ++ V+ ++ HL + ++G L A VF M +D+
Sbjct: 143 VHCCVFKMGFEDDVF----VAASLVHL-----------YSRYGVLDVAHKVFVDMPVKDV 187
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SWN +I G+ + G AL + RM GVK D T +L C D+ G +H+
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKG-EGVKMDTITVASILPVCAQSDDVINGVLIHL 246
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
HV++ G ++DV V NALI MY K G L A++VFD M RD +SWN++I+ Y +N +
Sbjct: 247 HVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPST 306
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLI 340
L F M+ + PD +T+ S+ S + D+++ R + G+VI+ + D DV + N L+
Sbjct: 307 ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM-EAEGSMPDE 399
MY G VF ++ KD +SW T+++ Y + L +A++ Y MM E ++P++
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQ 426
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T S++ A + +G L G+K+H ++ L + +A LID+Y KC ++ A+ +F++
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
IP + W +II L ++ R EAL F+ M+ +K + +T VS+LSAC+ G + G
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEG 546
Query: 519 K---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
+ +I I + + ++D+ R G ++ A+ + + D S W LL+
Sbjct: 547 QKCFDIMQKEYGIKPSLKHY--GCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Query: 574 ---YAERGQGALAEE 585
Y G LA +
Sbjct: 605 CKIYGNAELGTLASD 619
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 20/403 (4%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H ++ FG ++ + LI +YV GD+ +R FD + K++ SWN++IS Y
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 277 GEYMKGL----MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G+Y + + LF M + PDF T ++ A + D G++VH V KMGF DD
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMM 390
V V L+ +Y +G + KVF M KDV SW MIS C G+ A+ M
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA--GALGVLNRM 213
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ EG D IT+AS+L CA ++ G+ +H ++ GL S + ++N LI+MYSK +
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRL 273
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSAC 509
A VF Q+ ++++SW SII NN AL FF+ M L ++P+ +T+VS+ S
Sbjct: 274 QDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIF 333
Query: 510 ARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAW 567
+++ + I +R + D + NAL++MY + G M A F+ R D +W
Sbjct: 334 SQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISW 393
Query: 568 NILLTGYAERGQGALAEEFF------RKMIDSKGNWRKLMGLF 604
N L+TGY + G + A + + R I ++G W ++ +
Sbjct: 394 NTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 198/401 (49%), Gaps = 4/401 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C NG+ AL L+ M+ + +D + +++ +C G+ +H V K
Sbjct: 191 NAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK 250
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + NA ++M+ KFG L A VF +M RDL SWN +I Y + AL
Sbjct: 251 HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMY 242
++ M +GG++PD+ T + + D + + + VIR + + DV + NAL+ MY
Sbjct: 311 FKGM-QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMY 369
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G + A VFD +P++D ISWN +++GY +NG + + + MM E P+ T
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTW 429
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+I A VG + G ++H +IK DV V LI +Y G E+ +F +
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR 489
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
V W +I+ ++A++ ++ M AE D IT S+LSAC+ G +D G K
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ + G+ + ++D+ + ++KA E+ +P
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
A S+ + ++ ++C N++ KLH L + G I+++ LI++Y I
Sbjct: 15 ATTSLHKDADFNALFNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDIS 71
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-----NLKPNSVTLVSIL 506
+ F I KN+ SW SII + EA+ ++ +L+P+ T IL
Sbjct: 72 LSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPIL 131
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVS 565
AC +L+ GK++H ++G D F+ +L+ +Y R G + A F + +DV
Sbjct: 132 KACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+WN +++G+ + G A A +M
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRM 213
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 265/501 (52%), Gaps = 13/501 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
L++ C ++ + G LH +VS + + L ++M+ G + VF K+ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+LF WN ++ Y + F++A+S++ + V KPD +T PCV++ C G+ DL G+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H + +DV V NALI MY KCG + A VF+ MP+R+ +SWN++I G+ ENG
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 280 MKGLMLFIMMREVLVD-----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ F RE+LV PD TL +V+ D + G VHG +K+G ++++
Sbjct: 184 QESFNAF---REMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELM 240
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N LI MY E + +F + + K++VSW +MI Y + Q M+ E
Sbjct: 241 VNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300
Query: 395 S--MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+ DE TI +VL C L +LH + R GL S ++AN I Y++C +
Sbjct: 301 AKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCS 360
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
+ VF + K V SW +++ G N+ +AL + +M L P+ T+ S+L AC+R
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+ +L G+EIH ALR G+A D F+ +LL +Y+ CG+ A F+ E R + +WN++
Sbjct: 421 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 480
Query: 571 LTGYAERGQGALAEEFFRKMI 591
+ GY++ G A FR+M+
Sbjct: 481 IAGYSQNGLPDEAINLFRQML 501
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 258/484 (53%), Gaps = 7/484 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H + +K V +GNA ++M+ K G + A VF M +R+L SWN +I G+++
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 174 AGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
GF E+ + ++ M VG PDV T VL C G D+++G VH ++ G +
Sbjct: 180 NGFLQESFNAFREML-VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR- 290
+ V N+LI MY KC L A+L+FD K++ +SWN+MI GY + + L M+
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298
Query: 291 -EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + D T+ +V+ + + +E+HGY + G + V N I Y G
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E+VF M++K V SW ++ Y + P KA++ Y M G PD TI S+L AC
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ + +L G ++H A+R GL I +L+ +Y C A +F + ++++SW
Sbjct: 419 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 478
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G N EA+ FR+M+ + ++P + ++ + AC+++ AL GKE+H AL+
Sbjct: 479 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 538
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
+ D F+ ++++DMY + G + + F+ E+DV++WN+++ GY G+G A E F
Sbjct: 539 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 598
Query: 588 RKMI 591
KM+
Sbjct: 599 EKML 602
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 267/529 (50%), Gaps = 11/529 (2%)
Query: 73 NGSLEQALKYLDSM--QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
NG L+++ M E + D LV ++ +C + ++G+ +H + K + +
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL 239
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ + M+ K L A +F K +++ SWN +IGGYA+ L Q+M
Sbjct: 240 MVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTE 299
Query: 191 GG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+K D +T VL C +L+ KE+H + R G +++ V NA I Y +CG L
Sbjct: 300 DAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALC 359
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ VFD M + SWNA++ GY +N + K L L++ M + +DPD+ T+ S++ A
Sbjct: 360 SSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G E+HG+ ++ G + D + L+ +Y+ G + +F ME + +VSW
Sbjct: 420 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 479
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y + LPD+A+ ++ M ++G P EI I V AC+ L L LG +LH A++
Sbjct: 480 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 539
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L I +++++IDMY+K CI + +F ++ +K+V SW II G ++ R EAL F
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 599
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL---RIGVAFDGFLPNALLDMYV 545
KM+ L LKP+ T IL AC+ G + G E L I + + ++DM
Sbjct: 600 KMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY--TCVVDMLG 657
Query: 546 RCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR+ A + D W+ LL+ G L E+ K+++
Sbjct: 658 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 706
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 212/415 (51%), Gaps = 10/415 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA-LITMYVKCGDLVRARLVFDGMPKR 261
+L+ CG D++ G+ +H V + V+N +ITMY CG +R+VFD + ++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLV-DPDFMTLSSVISASELVGDEKLGREV 320
+ WNA++S Y N + + +F + V PD TL VI A + D LG+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVL 379
HG KM DV V N LI MY G EE KVF M +++VSW ++I + E L
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 380 PDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ +M+ E S +PD T+ +VL CA +++ G+ +H LA++ GL +++ N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---L 495
+LIDMYSKC+ + +A +F + KN++SW S+I G +KM +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
K + T++++L C L KE+H ++ R G+ + + NA + Y RCG + +
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 556 QFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ + + VS+WN LL GYA+ A + + +M DS +W + L C
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 36/376 (9%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
S +V + +T ++++ N + L N +AL M + + D + +L+ C
Sbjct: 361 SERVFDLMDTKTVSSWN--ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+ G +H + + +G + LS+++ G A +F M R L SWN
Sbjct: 419 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 478
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
V+I GY++ G DEA++L+++M G++P CV C + L+ GKE+H ++
Sbjct: 479 VMIAGYSQNGLPDEAINLFRQML-SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 537
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
D+ V +++I MY K G + ++ +FD + ++D SWN +I+GY +G + L L
Sbjct: 538 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALEL 597
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M + + PD T + ++ A H +++ D + N ++ ++
Sbjct: 598 FEKMLRLGLKPDDFTFTGILMACS-----------HAGLVE----DGLEYFNQMLNLH-- 640
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
+E K + +T ++ + D A+ + M + PD +S+
Sbjct: 641 ------------NIEPK-LEHYTCVVDMLGRAGRIDDALRLIEEMPGD---PDSRIWSSL 684
Query: 406 LSACACLGNLDLGIKL 421
LS+C GNL LG K+
Sbjct: 685 LSSCRIHGNLGLGEKV 700
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 281/537 (52%), Gaps = 5/537 (0%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
S+E L + M+ + +E L ++VR C + L LH V K V +G
Sbjct: 134 SVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGT 193
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ + + K G + A +F + + +W +I GYAK G + +L L+ +M G V
Sbjct: 194 SLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM-REGDVY 252
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD Y VL C + L+ GK++H +V+R G++ DV VVN +I Y+KC + R +
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKL 312
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + +D +SW MI+G +N + + LF+ M PD +SV+++ +
Sbjct: 313 FNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQAL 372
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ GR+VH Y IK+ +D V N LI MY + KVF + + +VVS+ MI Y
Sbjct: 373 QKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGY 432
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A++ ++ M S P +T S+L + L L+L ++H L ++ G+
Sbjct: 433 SRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDS 492
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ LID+YSKC C+ A VF +I D++++ W ++ G + E+L ++ + M
Sbjct: 493 FAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMS 552
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
LKPN T ++++A + I +L G++ H +++G+ D F+ N+L+DMY +CG ++ +
Sbjct: 553 RLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEES 612
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
F+S N+RD++ WN +++ YA+ G A A E F +MI K N+ +GL C
Sbjct: 613 HKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSAC 669
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 264/483 (54%), Gaps = 5/483 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y + ++ H VV H V L N L + K A +F M R+L +W+ ++
Sbjct: 69 YYKKIHAHIVVLGFHQH-DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSM 127
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y + G+ EAL L+ R KP+ Y V+R C + +L + ++H V++ G+
Sbjct: 128 YTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ 187
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V +LI Y K G + ARL+FDG+ + ++W A+I+GY + G L LF MR
Sbjct: 188 DVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMR 247
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
E V PD +SSV+SA ++ + G+++HGYV++ GF DVSV N +I YL +
Sbjct: 248 EGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVK 307
Query: 351 EGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
G K+F+R+ KDVVSWTTMI+ C + S D A++ + M +G PD SVL++C
Sbjct: 308 TGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGD-AMDLFVEMVRKGWKPDAFGCTSVLNSC 366
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L L G ++H A++ + + + N LIDMY+KC + A +VF + NV+S+
Sbjct: 367 GSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYN 426
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNS-VTLVSILSACARIGALMCGKEIHAHALRI 528
++I G ++ EAL FR+M L+L P + +T VS+L + + L +IH ++
Sbjct: 427 AMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKF 486
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
GV+ D F +AL+D+Y +C + A F +RD+ WN + +GY+++ + + + +
Sbjct: 487 GVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLY 546
Query: 588 RKM 590
+ +
Sbjct: 547 KDL 549
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 2/446 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E +LK + M+E ++ D + +++ C + G +H V + + V +
Sbjct: 234 GRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVV 293
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + ++K + +F ++ D+D+ SW +I G + F +A+ L+ M G
Sbjct: 294 NGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVR-KGW 352
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD + VL +CG + L++G++VH + I+ + D V N LI MY KC L AR
Sbjct: 353 KPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARK 412
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + + +S+NAMI GY + ++ L LF MR L P +T S++ S +
Sbjct: 413 VFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFL 472
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+L ++H +IK G S D + LI +Y + VF + +D+V W M S
Sbjct: 473 LELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSG 532
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +++++ Y+ ++ P+E T A+V++A + + +L G + H ++ GL
Sbjct: 533 YSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDD 592
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMM 492
+ N+L+DMY+KC I+++ + F +++ W S+I + + +AL +F R +M
Sbjct: 593 PFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIM 652
Query: 493 LNLKPNSVTLVSILSACARIGALMCG 518
+KPN VT V +LSAC+ G L G
Sbjct: 653 EGVKPNYVTFVGLLSACSHAGLLDLG 678
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 2/346 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + M+ K L +A VF + ++ S+N +I GY++ EAL L++ M +
Sbjct: 395 NGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREM-RLSLS 453
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P + TF +L + L+ ++H +I+FG D +ALI +Y KC + ARL
Sbjct: 454 PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL 513
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + RD + WNAM SGY + E + L L+ ++ + P+ T ++VI+A+ +
Sbjct: 514 VFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G++ H VIKMG DD V N L+ MY G+ EE K FS +D+ W +MIS
Sbjct: 574 LRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIST 633
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y KA+E ++ M EG P+ +T +LSAC+ G LDLG + + G+
Sbjct: 634 YAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPG 693
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
I ++ + + I +A E ++P K + W S++ R++
Sbjct: 694 IDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVS 739
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 257/480 (53%), Gaps = 5/480 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A + M+ G L A VF M +RD WNV++ GY KAG A+ L+ M
Sbjct: 183 VGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMR-AS 241
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ T C L DL G ++H +++G E++V V N L++MY KC L
Sbjct: 242 GCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG 301
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F MP+ D ++WN MISG +NG + L+LF M++ + PD +TL S++ A +
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+E+HGY+++ DV + + L+ +Y + V+ ++ DVV +TMI
Sbjct: 362 NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMI 421
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + + +AV+ ++ + +G P+ + IASVL ACA + + LG +LH A++
Sbjct: 422 SGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYE 481
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+DMY+KC +D + +F +I K+ ++W S+I N EAL FR+M
Sbjct: 482 GRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM 541
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M +K ++VT+ S+LSACA + A+ GKEIH ++ + D F +AL+DMY +CG +
Sbjct: 542 CMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNL 601
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A F S E++ +WN ++ Y G + R M + K + + L C
Sbjct: 602 EWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC 661
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 254/501 (50%), Gaps = 9/501 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFV---KFGDLGHAWYVF 153
L+ ++R C GL +H V+ + L + M+V +F D +
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTCGGVP 211
+ WN LI G AG + AL Y +M W PD +TFP V+++C +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALG 160
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ VH G + D+ V +ALI MY G L AR VFDGM +RD + WN M+
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + G + LF MR +P+F TL+ +S S D G ++H +K G
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V+V N L+ MY ++G K+F M D+V+W MIS + D+A+ + M+
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD +T+ S+L A L + G +LH +R + + + + L+D+Y KC+ +
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A V+ +V+ +++I G LN S EA+ FR ++ ++PN+V + S+L ACA
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ A+ G+E+H++AL+ ++ +AL+DMY +CGR+ + F+ + +D WN
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520
Query: 570 LLTGYAERGQGALAEEFFRKM 590
+++ +A+ G+ A FR+M
Sbjct: 521 MISSFAQNGEPEEALNLFREM 541
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 231/444 (52%), Gaps = 7/444 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ LH++ K V + N +SM+ K L W +FG M DL +WN +I G +
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
GF D+AL L+ M G++PD T +L + +GKE+H +++R DV
Sbjct: 326 NGFVDQALLLFCDM-QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVF 384
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+V+AL+ +Y KC + A+ V+D D + + MISGY NG + + +F + E
Sbjct: 385 LVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG 444
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P+ + ++SV+ A + KLG+E+H Y +K + V + L+ MY G +
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+FS++ +KD V+W +MIS + + P++A+ ++ M EG +TI+SVLSACA L
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ G ++H + ++ + + + + LIDMY KC ++ A VF +P+KN +SW SII
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHALRIG 529
E++ R M K + VT ++++SACA G + G + +I
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA 553
+ F ++D+Y R G++ A
Sbjct: 685 PRMEHF--ACMVDLYSRAGKLDKA 706
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 204/398 (51%), Gaps = 8/398 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VLR C L G +VH + G A D + L+ MYV A VF +P+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 262 DR---ISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDEKL 316
+ WN +I G G+Y L+ ++ M PD T V+ + +G L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR VH +G D+ V + LIKMY + G + +VF M +D V W M+ Y
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ AVE + M A G P+ T+A LS A +L G++LH LA++ GL S + +
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
ANTL+ MY+KCKC+D ++F +P ++++W +I G N +AL+ F M + +
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P+SVTLVS+L A + GKE+H + +R V D FL +AL+D+Y +C ++ A +
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 556 QFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
++S++ DV + +++GY G A + FR +++
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 219/435 (50%), Gaps = 16/435 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++QAL MQ+ I D LV+L+ G+++G LH + + H+ V L
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + ++ K + A V+ D+ + +I GY G EA+ ++ R G
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMF-RYLLEQG 444
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++P+ VL C + +K G+E+H + ++ YE V +AL+ MY KCG L +
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + +D ++WN+MIS + +NGE + L LF M V +T+SSV+SA +
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+HG VIK D+ + LI MY GN E +VF M K+ VSW ++I+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-------HQLA 425
Y L ++V + M+ EG D +T +++SACA G + G++L +Q+A
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEA 484
R + ++D+YS+ +DKA+E+ +P K + W +++ R+ +R+ E
Sbjct: 685 PRMEHFA------CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRV-HRNVEL 737
Query: 485 LIFFRKMMLNLKPNS 499
+ + L P++
Sbjct: 738 AEIASQELFKLDPHN 752
>gi|255541480|ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548984|gb|EEF50473.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 607
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 264/510 (51%), Gaps = 37/510 (7%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG------------------ 175
N L+ K G + A ++F K+ +RD FSWN +I YA +G
Sbjct: 26 NQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSGRLTDAKQLFCEAPLKSSI 85
Query: 176 -------------FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
F EA LY +M + G +P+ YT +LR C L++G+ +H +
Sbjct: 86 TWSSLISGFCKYEFDIEAFELYLQMQFEGQ-RPNHYTLGSILRLCSRTGFLQKGERIHGY 144
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMK 281
I+ +A+V VV +L+ +Y KC + A +F+ + ++ +W AM++GY NG+ +
Sbjct: 145 AIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGYSHNGDGFR 204
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ F MR V+ + T S+++A V D G +VHG +++ GF ++ V + L+
Sbjct: 205 AIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSALVD 264
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY + +V ME DVVSW +MI +A+ + M A D+ T
Sbjct: 265 MYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLFNEMHARDIKIDDYT 324
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
SVL++ A + ++ H L ++TG +Y ++ N L+DMY+K +D A VF+Q+P
Sbjct: 325 YPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDMYAKQGNLDYAFTVFNQMP 384
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE 520
DK+V+SWTS++ G N +A+ F M + + P+ + L S+LSACA + G++
Sbjct: 385 DKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVTEFGQQ 444
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ 579
+HA L+ G+ + N+L+ MY +CG ++ A F+S + RDV +W L+ GYA+ G+
Sbjct: 445 VHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGR 504
Query: 580 GALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
G + F+ +MI +K ++ +GL C
Sbjct: 505 GKDSLHFYDQMIATGTKPDFITFIGLLFAC 534
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 230/424 (54%), Gaps = 3/424 (0%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
L +++RLC +G +H KT +V + + + ++ K + A Y+F +
Sbjct: 122 LGSILRLCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVA 181
Query: 158 D-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
D ++ +W ++ GY+ G A+ ++ M GV+ + +TFP +L CG V D G
Sbjct: 182 DSKNHATWTAMLTGYSHNGDGFRAIKCFRDM-RAEGVESNQFTFPSILTACGAVSDHVFG 240
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+VH ++R G+ A++ V +AL+ MY KC DL A V + M D +SWN+MI G
Sbjct: 241 VQVHGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVRE 300
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + L LF M + D T SV+++ + D + + H +IK GF V
Sbjct: 301 GFEAEALSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVN 360
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY GN + VF++M KDVVSWT++++ Y + + A++ + M G
Sbjct: 361 NALVDMYAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVC 420
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD+I +ASVLSACA L + G ++H +++GL S + I N+L+ MY+KC I+ A V
Sbjct: 421 PDQIVLASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYV 480
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F + ++VISWT++I+G N R ++L F+ +M+ KP+ +T + +L AC+ G +
Sbjct: 481 FDSMQIRDVISWTALIVGYAQNGRGKDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLV 540
Query: 516 MCGK 519
G+
Sbjct: 541 EDGR 544
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 1/346 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A+K M+ + ++ +++ C + G+ +H + ++ ++ +
Sbjct: 199 NGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFV 258
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K DL A V M D+ SWN +I G + GF EALSL+ M
Sbjct: 259 QSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLFNEMH-ARD 317
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D YT+P VL + + D++ K H +I+ G+ A V NAL+ MY K G+L A
Sbjct: 318 IKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDMYAKQGNLDYAF 377
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ MP +D +SW ++++GY NG Y + LF MR V PD + L+SV+SA +
Sbjct: 378 TVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELT 437
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G++VH ++K G +S+ N L+ MY G E+ VF M+ +DV+SWT +I
Sbjct: 438 VTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIV 497
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y + ++ Y M A G+ PD IT +L AC+ G ++ G
Sbjct: 498 GYAQNGRGKDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLVEDG 543
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 151/297 (50%), Gaps = 6/297 (2%)
Query: 299 MTLSSVISASELVGDEKLGR--EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ S++ S +L K GR E K+ D+ S N +I Y + G + +++F
Sbjct: 18 FSYSAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFS-WNTMIAAYANSGRLTDAKQLF 76
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
K ++W+++IS + +A E Y M+ EG P+ T+ S+L C+ G L
Sbjct: 77 CEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILRLCSRTGFLQ 136
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGL 475
G ++H A++T L + + + +L+D+Y+KC+CI +A +F + D KN +WT+++ G
Sbjct: 137 KGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGY 196
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N F A+ FR M ++ N T SIL+AC + + G ++H +R G +
Sbjct: 197 SHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANI 256
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +AL+DMY +C + A + E DV +WN ++ G G A A F +M
Sbjct: 257 FVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLFNEM 313
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 34/201 (16%)
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN------------------- 464
+A +TG I +N ++ SK ID+A +F ++P+++
Sbjct: 12 IARQTGFSYSAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSGRLTD 71
Query: 465 ------------VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
I+W+S+I G EA + +M +PN TL SIL C+R
Sbjct: 72 AKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILRLCSR 131
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNI 569
G L G+ IH +A++ + + F+ +L+D+Y +C + A F ++ ++ + W
Sbjct: 132 TGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTA 191
Query: 570 LLTGYAERGQGALAEEFFRKM 590
+LTGY+ G G A + FR M
Sbjct: 192 MLTGYSHNGDGFRAIKCFRDM 212
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 270/498 (54%), Gaps = 5/498 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G YLH + K + L + N L+ +VK+ L A +F +M DR+ S+ LI GY++
Sbjct: 63 GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
F EA+ L+ R+ G + + + F VL+ K G VH V + G+++D
Sbjct: 123 CLRFSEAIGLFSRLQGEGH-ELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ALI Y CG AR VFD + +D +SW M++ Y EN + + L LF MR V
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ T +SV+ A + +G+ VHG K + +++ V LI +Y+ G+ ++
Sbjct: 242 FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M DV+ W+ MI+ Y S ++A+E + M +P++ T+AS+L ACA L
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L LG ++H ++ GL + ++N L+DMY+KC ++ +L++F + P+ +SW ++I+
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G +ALI F+ M+ ++ VT S+L ACA I AL G +IH+ +++
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDK 481
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + NAL+DMY +CG +K A F+ E D +WN +++GY+ G A + F M+
Sbjct: 482 NTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESML 541
Query: 592 DSKGNWRKL--MGLFRKC 607
+++ K+ +G+ C
Sbjct: 542 ETECKPDKVTFVGILSAC 559
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 216/404 (53%), Gaps = 8/404 (1%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ Y + +L++C D GK +H +I+ G D+ N L+ YVK L A +F
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE- 314
D MP R+ +S+ +I GY + + + + LF ++ + + S+V+ LV E
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL--LVSAEW 160
Query: 315 -KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
KLG VH V K+GF D V LI Y G E +VF +E KD+VSWT M++C
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +++++ + M G P+ T ASVL AC L ++G +H A +T +
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + LID+Y K +D AL+VF ++P +VI W+ +I + +S EA+ F +M
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 494 NLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L PN TL S+L ACA + L G +IH H +++G+ + F+ NAL+DMY +CGRM+
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400
Query: 553 AWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ F+ N DVS WN ++ GY + G G A F+ M++ +
Sbjct: 401 SLQLFSESPNCTDVS-WNTVIVGYVQAGNGEKALILFKDMLECQ 443
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 226/434 (52%), Gaps = 6/434 (1%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
ELN V L LV EW + G +H+ V K +G A + + G
Sbjct: 141 HELNPFVFSTVLKLLVS-AEWAK---LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYA 196
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF + +D+ SW ++ Y + F+E+L L+ RM VG KP+ +TF VL+
Sbjct: 197 ECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG-FKPNNFTFASVLKA 255
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C G+ GK VH + Y ++ V LI +Y+K GD+ A VF+ MPK D I W
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPW 315
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
+ MI+ Y ++ + + + +F MR LV P+ TL+S++ A + D +LG ++H +V+K
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
+G +V V N L+ MY G E ++FS + VSW T+I Y + +KA+
Sbjct: 376 VGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALIL 435
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
++ M E+T +SVL ACA + L+ G ++H L+++T ++ N LIDMY+K
Sbjct: 436 FKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAK 495
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C I A VF + + + +SW ++I G ++ EAL F M+ KP+ VT V I
Sbjct: 496 CGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGI 555
Query: 506 LSACARIGALMCGK 519
LSAC+ G L G+
Sbjct: 556 LSACSNAGLLDRGQ 569
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 208/413 (50%), Gaps = 11/413 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E++LK M+ + + ++++ C ++ G +H KT + +
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + +++K GD+ A VF +M D+ W+ +I YA++ +EA+ ++ RM G
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRM-RRGL 342
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +T +L+ C + DL+ G ++H HV++ G + +V V NAL+ MY KCG + +
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F P +SWN +I GY + G K L+LF M E V +T SSV+ A +
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G ++H +K + + V N LI MY GN ++ VF + D VSW MIS
Sbjct: 463 ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMIS 522
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L +A++T++ M PD++T +LSAC+ G LD G Q ++ +
Sbjct: 523 GYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG----QAYFKSMVEE 578
Query: 433 YIIIA-----NTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
Y I ++ + + +DKA ++ H+IP + +V+ W +++ ++N
Sbjct: 579 YDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN 631
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 286 FIMMREVLVDPDFMTL--SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
F+ R P+F T S++ + GD G+ +H +IK G D+ N L+ Y
Sbjct: 30 FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
+ + + + K+F M ++ VS+ T+I Y + +A+ + ++ EG + +
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFS 149
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+VL LG +H + G S + LID YS C + A +VF I K
Sbjct: 150 TVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYK 209
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIH 522
+++SWT ++ N E+L F +M ++ KPN+ T S+L AC + GK +H
Sbjct: 210 DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVH 269
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGA 581
A + + F+ L+D+Y++ G + A F + DV W+ ++ YA+ Q
Sbjct: 270 GCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE 329
Query: 582 LAEEFFRKM 590
A E F +M
Sbjct: 330 EAIEMFCRM 338
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 245/431 (56%), Gaps = 2/431 (0%)
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+ Y K + EAL L+ R+ ++PD +T+P VL+ CGG+ G+ +H H+I+ G
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ D+ V ++L++++ KC A +FD MP+RD WN +IS Y+++G+ K L +F
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
MR+ +P+ +TL++VIS+ + D + G+E+H V++ G D V + L+ MY FG
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ + +F +M K +V+W ++I+ Y + + +E + M EG+ P T++S+L
Sbjct: 181 CLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILL 240
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ +L G +H A+R + I +++ LI++Y KC + A +F+ +P NV+
Sbjct: 241 ACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVL 300
Query: 468 WTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W +I G +AL + +M + ++KP++VT SILSAC+++ AL GKEIH
Sbjct: 301 WNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCIT 360
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
+ + + + ALLDMY +CG + A + FN ERD+ +W +++ Y GQ A
Sbjct: 361 KNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALR 420
Query: 586 FFRKMIDSKGN 596
F ++ SK +
Sbjct: 421 LFEELQQSKAS 431
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 232/415 (55%), Gaps = 2/415 (0%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++++ C YD G +H+ + K+ + + ++ +S+ K G+A +F +M +R
Sbjct: 35 SVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPER 94
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ WN +I Y + G ++AL ++ +M G +P+ T V+ +C + DL+RGKE+
Sbjct: 95 DVACWNTVISCYYQDGKAEKALEMFGKM-RDSGFEPNSVTLTTVISSCARLLDLERGKEI 153
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V++ G D V +AL+ MY K G L A+ +F+ MPK+ ++WN++I+GY +
Sbjct: 154 HREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADS 213
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + LF M P TLSS++ A + GR +HGY ++ D+ V + L
Sbjct: 214 KECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGL 273
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I++Y G + E +F + +VV W MIS Y KA++ Y M+ PD
Sbjct: 274 IELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDA 333
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T +S+LSAC+ L L+ G ++H + L + I+ L+DMY+KC +D+AL VF++
Sbjct: 334 VTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNK 393
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+P+++++SWTSII + ++ EAL F ++ + P++VT +++LSAC+ G
Sbjct: 394 LPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAG 448
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 7/394 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL+ M++ + L ++ C + G +H V + L +
Sbjct: 109 DGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFV 168
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A + M+ KFG L A +F +M + L +WN LI GY+ A E + L+ RM + G
Sbjct: 169 GSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMN-MEG 227
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KP V T +L C L+ G+ +H + +R + D+ V + LI +Y KCG + A
Sbjct: 228 TKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAE 287
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELV 311
+F +PK + + WN MISGY G+Y+K L ++ M+ V PD +T SS++SA S+L
Sbjct: 288 NIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLA 347
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
EK G+E+H + K + V L+ MY G +E VF+++ +D++SWT++I
Sbjct: 348 ALEK-GKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSII 406
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGL 430
S Y +A+ ++ ++ + PD +T +VLSAC+ G +D G +Q+ G+
Sbjct: 407 SAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGI 466
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+ + LID+ + I + + ++IP N
Sbjct: 467 KPGLEHYSCLIDLLGR---IQEQSQELNEIPCPN 497
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 247/472 (52%), Gaps = 12/472 (2%)
Query: 133 GNAFLSMFVKFGDLGHAWY---VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
G+ ++ V + GH Y +F +M L S+N++I Y + G + +A+S++ RM
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV- 107
Query: 190 VGGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GVK PD YT+P V + G + +K G VH ++R + D V NAL+ MY+ G
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD M RD ISWN MISGY+ NG LM+F M VD D T+ S++
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ D ++GR VH V + D + V N L+ MYL G +E VF RME +DV++W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI+ Y + A+E ++M+ EG P+ +TIAS++S C ++ G LH A+R
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ S III +LI MY+KCK +D VF + W++II G N +AL
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M +++PN TL S+L A A + L IH + + G L+ +Y +
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 547 CGRMKPAWNQFNS-----NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG ++ A FN +DV W L++GY G G A + F +M+ S
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 249/509 (48%), Gaps = 25/509 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H + ++ + NA L+M++ FG + A VF M +RD+ SWN +I GY +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ ++AL ++ M V D T +L CG + DL+ G+ VH V ++
Sbjct: 196 NGYMNDALMMFDWMV-NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY+KCG + AR VFD M +RD I+W MI+GY E+G+ L L +M+
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ +T++S++S G+ +HG+ ++ D+ + LI MY +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 354 KVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VFS W+ +I+ C + ++ D A+ ++ M E P+ T+ S+L A A L
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSD-ALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD----KNVISW 468
+L + +H +TG +S + A L+ +YSKC ++ A ++F+ I + K+V+ W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI------ 521
++I G ++ AL F +M+ + + PN +T S L+AC+ G + G +
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQ 579
H L + ++D+ R GR+ A+N + E + W LL
Sbjct: 554 HYKTLARSNHY-----TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHEN 608
Query: 580 GALAE----EFFRKMIDSKGNWRKLMGLF 604
L E + F ++ GN+ L ++
Sbjct: 609 VQLGEMAANKLFELEPENTGNYVLLANIY 637
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 214/452 (47%), Gaps = 18/452 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL D M ++ +D +V+++ +C + + G +H +V + + +
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M++K G + A +VF +M RD+ +W +I GY + G + AL L R+ G
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC-RLMQFEG 314
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ T ++ CG + GK +H +R +D+ + +LI+MY KC +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF G K W+A+I+G +N L LF MR V+P+ TL+S++ A +
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS----RMESKDVVSWT 368
D + +H Y+ K GF + L+ +Y G E K+F+ + +SKDVV W
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS Y A++ + M G P+EIT S L+AC+ G ++ G+ L R
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL----FRF 550
Query: 429 GLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L Y +A + ++D+ + +D+A + IP + + +L + + + +
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQ 610
Query: 484 ALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+ L+P N V L +I +A R
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGR 642
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 257/480 (53%), Gaps = 5/480 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A + M+ G L A VF M +RD WNV++ GY KAG A+ L+ M
Sbjct: 183 VGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMR-AS 241
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ T C L DL G ++H +++G E++V V N L++MY KC L
Sbjct: 242 GCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG 301
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F MP+ D ++WN MISG +NG + L+LF M++ + PD +TL S++ A +
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+E+HGY+++ DV + + L+ +Y + V+ ++ DVV +TMI
Sbjct: 362 NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMI 421
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + + +AV+ ++ + +G P+ + IASVL ACA + + LG +LH A++
Sbjct: 422 SGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYE 481
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+DMY+KC +D + +F +I K+ ++W S+I N EAL FR+M
Sbjct: 482 GRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM 541
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M +K ++VT+ S+LSACA + A+ GKEIH ++ + D F +AL+DMY +CG +
Sbjct: 542 CMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNL 601
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A F S E++ +WN ++ Y G + R M + K + + L C
Sbjct: 602 EWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC 661
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 254/501 (50%), Gaps = 9/501 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFV---KFGDLGHAWYVF 153
L+ ++R C GL +H V+ + L + M+V +F D +
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTCGGVP 211
+ WN LI G AG + AL Y +M W PD +TFP V+++C +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALG 160
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ VH G + D+ V +ALI MY G L AR VFDGM +RD + WN M+
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + G + LF MR +P+F TL+ +S S D G ++H +K G
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V+V N L+ MY ++G K+F M D+V+W MIS + D+A+ + M+
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD +T+ S+L A L + G +LH +R + + + + L+D+Y KC+ +
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A V+ +V+ +++I G LN S EA+ FR ++ ++PN+V + S+L ACA
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ A+ G+E+H++AL+ ++ +AL+DMY +CGR+ + F+ + +D WN
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520
Query: 570 LLTGYAERGQGALAEEFFRKM 590
+++ +A+ G+ A FR+M
Sbjct: 521 MISSFAQNGEPEEALNLFREM 541
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 231/444 (52%), Gaps = 7/444 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ LH++ K V + N +SM+ K L W +FG M DL +WN +I G +
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
GF D+AL L+ M G++PD T +L + +GKE+H +++R DV
Sbjct: 326 NGFVDQALLLFCDM-QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVF 384
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+V+AL+ +Y KC + A+ V+D D + + MISGY NG + + +F + E
Sbjct: 385 LVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG 444
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P+ + ++SV+ A + KLG+E+H Y +K + V + L+ MY G +
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+FS++ +KD V+W +MIS + + P++A+ ++ M EG +TI+SVLSACA L
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ G ++H + ++ + + + + LIDMY KC ++ A VF +P+KN +SW SII
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHALRIG 529
E++ R M K + VT ++++SACA G + G + +I
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA 553
+ F ++D+Y R G++ A
Sbjct: 685 PRMEHF--ACMVDLYSRAGKLDKA 706
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 204/398 (51%), Gaps = 8/398 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VLR C L G +VH + G A D + L+ MYV A VF +P+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 262 DR---ISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDEKL 316
+ WN +I G G+Y L+ ++ M PD T V+ + +G L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR VH +G D+ V + LIKMY + G + +VF M +D V W M+ Y
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ AVE + M A G P+ T+A LS A +L G++LH LA++ GL S + +
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
ANTL+ MY+KCKC+D ++F +P ++++W +I G N +AL+ F M + +
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P+SVTLVS+L A + GKE+H + +R V D FL +AL+D+Y +C ++ A +
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 556 QFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
++S++ DV + +++GY G A + FR +++
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 219/435 (50%), Gaps = 16/435 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++QAL MQ+ I D LV+L+ G+++G LH + + H+ V L
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + ++ K + A V+ D+ + +I GY G EA+ ++ R G
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMF-RYLLEQG 444
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++P+ VL C + +K G+E+H + ++ YE V +AL+ MY KCG L +
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + +D ++WN+MIS + +NGE + L LF M V +T+SSV+SA +
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+HG VIK D+ + LI MY GN E +VF M K+ VSW ++I+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-------HQLA 425
Y L ++V + M+ EG D +T +++SACA G + G++L +Q+A
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEA 484
R + ++D+YS+ +DKA+E+ +P K + W +++ R+ +R+ E
Sbjct: 685 PRMEHFA------CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRV-HRNVEL 737
Query: 485 LIFFRKMMLNLKPNS 499
+ + L P++
Sbjct: 738 AEIASQELFKLDPHN 752
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 280/538 (52%), Gaps = 12/538 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
SL + Y D Q N ++++ C G +H V K +
Sbjct: 85 SLYHEMVYQDQTQISNF-----VFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ L M+ + L A F M RD+ +W+ ++ + + G E L ++ +M V+
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMI-SEAVE 198
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD T V C + L+ G+ VH +V+R E++ + N+LI MY K GDL A +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ +P R W MIS Y ++G + + L +F M+E ++P+ +T+ V+ A +G
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 315 KLGREVHGYVIKMGFSDDVSVCNP-LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K GR VHG+VI+ ++ P L+++Y GN + KVF ++ K ++SW T+IS
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISI 378
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + P++A+ + M+ +G MPD ++AS LSAC + LG ++H ++TG +
Sbjct: 379 FTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFN- 437
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ N LIDMY+KC + A ++F +I +K++++W S+I G N S EA+ F +M +
Sbjct: 438 DFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYM 497
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N +K + +T +S++ AC+ +G L GK +H + G+ D +L AL DMY +CG ++
Sbjct: 498 NCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQM 557
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A F+ +ER + +W++++ GY GQ F +M+ S K N M + C
Sbjct: 558 AHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 615
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 245/477 (51%), Gaps = 4/477 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + T H + + + G + VF D F W VLI Y GF
Sbjct: 20 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F+EA+SLY M + + + FP VL+ C G DL G +VH VI+ G+E+D V
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY + L A FD MP RD ++W++++ + +NG+ +GL +F M V+P
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEP 199
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T+ SV A +G +LGR VHGYV++ + S+ N LI MY G+ E++F
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ + WT MISCY S +A+ + M+ P+++T+ VL ACA LG +
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319
Query: 417 LGIKLHQLAMRTGLISYI-IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +H +R + + + L+++Y+ + +VF I +K ++SW ++I
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N + EAL+ F +M L P+S +L S LSAC I G +IH + ++ G F+
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFND 438
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ NAL+DMY +CG + A F E+ + WN ++ G+++ G A F +M
Sbjct: 439 FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 495
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 247/505 (48%), Gaps = 6/505 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L M + D ++++ C G +H V + + L
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ K GDL A +F + R W +I Y ++G F EAL+++ +M
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFK- 297
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRA 251
++P+ T VL C + +K G+ VH VIR + ++D + AL+ +Y G+L
Sbjct: 298 MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDC 357
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ + ++ +SWN +IS + NG+ + L+LF+ M+ + PD +L+S +SA +
Sbjct: 358 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 417
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+LG ++HGY+IK G +D V N LI MY G K+F +++ K +V+W +MI
Sbjct: 418 SFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMI 476
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + +A+ + M D++T SV+ AC+ LG L+ G +H + GL
Sbjct: 477 CGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR 536
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ L DMYSKC + A VF ++ +++++SW+ +I G ++ + + F +M
Sbjct: 537 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM 596
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ +KPN +T + ILSAC+ GA+ GK GV ++D+ R G +
Sbjct: 597 LGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDL 656
Query: 551 KPAWNQFNS--NERDVSAWNILLTG 573
A+ S + S W LL G
Sbjct: 657 NGAYQIITSLPFPANSSIWGALLNG 681
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 181/377 (48%), Gaps = 4/377 (1%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H H+ G LI Y + G ++ VFD PK D W +I Y G
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 278 EYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + + L+ M+ + SV+ A GD +G +VHG VIK GF D V
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+ MY ++ K F M +DVV+W++++ + + + ++ + M +E
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +T+ SV AC+ LG+L LG +H +R + S + N+LI MY K + A +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
F +P + WT +I + EAL F KM ++PN VT+V +L ACAR+G +
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 516 MCGKEIHAHALRIGVAFD-GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
G+ +H +R + + FL AL+++Y G ++ F + E+ + +WN L++
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISI 378
Query: 574 YAERGQGALAEEFFRKM 590
+ GQ A F +M
Sbjct: 379 FTRNGQPEEALLLFVQM 395
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 6/414 (1%)
Query: 71 CLN--GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSH 127
C N G ++AL MQE + ++ +V ++ C EG +H V+ + M
Sbjct: 276 CYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDP 335
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
LG A + ++ G+L VF + ++ + SWN LI + + G +EAL L+ +M
Sbjct: 336 ELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM 395
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G+ PD Y+ L CG + + G ++H ++I+ G D V NALI MY KCG
Sbjct: 396 -QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGF 453
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A +F+ + ++ ++WN+MI G+ +NG ++ + LF M V D +T SVI A
Sbjct: 454 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 513
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G + G+ VH +I G D + L MY G + VF RM + +VSW
Sbjct: 514 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSW 573
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+ MI+ Y + + + M G P++IT +LSAC+ G ++ G
Sbjct: 574 SVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE 633
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
G+ ++D+ S+ ++ A ++ +P N W +++ G R++ R
Sbjct: 634 FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKR 687
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 133/255 (52%), Gaps = 2/255 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG E+AL MQ + D +L + + C G +H + K
Sbjct: 373 NTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + + + NA + M+ K G + A +F K+ ++ L +WN +I G+++ G+ EA++L
Sbjct: 433 T-GNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITL 491
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M+ + VK D TF V++ C + L++GK VH +I +G D + AL MY
Sbjct: 492 FDQMY-MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYS 550
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L A VFD M +R +SW+ MI+GY +G+ + LF M + P+ +T
Sbjct: 551 KCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMH 610
Query: 304 VISASELVGDEKLGR 318
++SA G + G+
Sbjct: 611 ILSACSHAGAVEEGK 625
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +A+ D M + +D+ +++++ C ++G ++H +
Sbjct: 473 NSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM 532
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L A M+ K G+L A VF +M +R + SW+V+I GY G + +SL
Sbjct: 533 YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISL 592
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G+KP+ TF +L C ++ GK + FG E D ++ +
Sbjct: 593 FNQMLG-SGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLS 651
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ GDL A + +P S W A+++G
Sbjct: 652 RAGDLNGAYQIITSLPFPANSSIWGALLNG 681
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 278/549 (50%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M+ L I D +++ C Y GL +H + +
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQ 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A + M+ K L A+ +F +M +R+L W+ +I GY + F E L L
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M VG GV T+ V R+C G+ K G ++H H ++ + D + A + MY
Sbjct: 227 FKDMLKVGMGVSQS--TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMY 284
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC + A VF+ +P R S+NA+I GY + +K L +F ++ + D ++LS
Sbjct: 285 AKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLS 344
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++A ++ G ++HG +K G ++ V N ++ MY G E +F ME +
Sbjct: 345 GALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERR 404
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + K + + M PD+ T SV+ ACA L+ G+++H
Sbjct: 405 DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIH 464
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++G+ + + L+DMY KC + +A ++ ++ +K +SW SII G +S
Sbjct: 465 GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSE 524
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A +F +M+ + + P++ T ++L CA + + GK+IHA L++ + D ++ + L+
Sbjct: 525 NAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLV 584
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG M+ + F +RD W+ ++ YA G G A + F +M ++ K N
Sbjct: 585 DMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHT 644
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 645 IFISVLRAC 653
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 252/470 (53%), Gaps = 3/470 (0%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M H V N + + + G++G A +F M +RD+ SWN L+ Y G +++ ++
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
RM + + D TF VL+ C G+ D G +VH I+ G+E DV +AL+ MY K
Sbjct: 127 VRMRSLK-IPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
C L A +F MP+R+ + W+A+I+GY +N +++GL LF M +V + T +SV
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ + KLG ++HG+ +K F+ D + + MY + KVF+ + +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
S+ +I Y KA+E +Q ++ DEI+++ L+AC+ + GI+LH L
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A++ GL I +ANT++DMY KC + +A +F + ++ +SW +II N +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F M+ + ++P+ T S++ ACA AL G EIH ++ G+ D F+ +AL+DM
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
Y +CG + A + E+ +WN +++G++ + Q A+ +F +M++
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLE 535
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 207/432 (47%), Gaps = 39/432 (9%)
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TF +L+ C + L GK+ H +I + + V N L+ Y K ++ A VFD
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 258 MPKRDRISWNAMISGYFE-------------------------------NGEYMKGLMLF 286
MP RD ISWN MI GY E NG K + +F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ MR + + D+ T S V+ A + D LG +VH I+MGF +DV + L+ MY
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIA 403
+ ++F M +++V W+ +I+ G V D+ +E ++ M G + T A
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIA---GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SV +CA L LG +LH A+++ II +DMY+KC + A +VF+ +P+
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH 522
S+ +II+G ++ +AL F+ + L + ++L L+AC+ I + G ++H
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGA 581
A++ G+ F+ + N +LDMY +CG + A F+ E RD +WN ++ + + +
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423
Query: 582 LAEEFFRKMIDS 593
F M+ S
Sbjct: 424 KTLSLFVSMLRS 435
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 218/439 (49%), Gaps = 5/439 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ S+Q + DE +L + C +G+ EG+ LH + K ++ + N L
Sbjct: 323 KALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTIL 382
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A +F M RD SWN +I + + + LSL+ M ++PD
Sbjct: 383 DMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML-RSTMEPDD 441
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ V++ C G L G E+H +++ G D V +AL+ MY KCG L+ A + D
Sbjct: 442 FTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDR 501
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ ++ +SWN++ISG+ + F M E+ V PD T ++V+ + +LG
Sbjct: 502 LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELG 561
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++H ++K+ DV + + L+ MY GN ++ +F + +D V+W+ MI Y
Sbjct: 562 KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-RTGLISYIII 436
++A++ ++ M+ P+ SVL ACA +G +D G+ Q+ GL ++
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEH 681
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ ++D+ + +++AL++ + + + + W +++ ++ A F +L L
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNS-LLQL 740
Query: 496 KP-NSVTLVSILSACARIG 513
P +S V + + A +G
Sbjct: 741 DPQDSSAYVLLANVYANVG 759
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ T + +L C+ L L+ G + H + T + I +AN L+ Y K ++ A +VF
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 459 QIPDKNVISWTSIILGLR----------------------------------LNNRSFEA 484
++P ++VISW ++I G +N +S E
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE- 124
Query: 485 LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
IF R L + + T +L AC+ I G ++H A+++G D +AL+DMY
Sbjct: 125 -IFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+C ++ A+ F ER++ W+ ++ GY + + + F+ M+
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
T IL C+ + AL GK+ HA + ++ N L+ Y + M A+ F+
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLMGLF 604
RDV +WN ++ GYAE G A+ F M + +W L+ +
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCY 113
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 276/537 (51%), Gaps = 7/537 (1%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
LE + ++ M+ N +E L ++VR C G + L +H +V K V + +
Sbjct: 122 LEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTS 181
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ + K + A +F + + F+W +I GY+K G +L L+ +M G V P
Sbjct: 182 LIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM-KEGHVCP 240
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D Y VL C + L+ GK++H +V+R G DV +VN I Y KC + R +F
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI-SASELVGDE 314
D M ++ +SW +I+G +N + L LF+ M + +PD +SV+ S LV E
Sbjct: 301 DRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALE 360
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K GR+VH Y IK+ +D V N LI MY + + KVF+ M + D+VS+ MI Y
Sbjct: 361 K-GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGY 419
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A++ ++ M S P + S+L A L +L+L ++H L ++ G+
Sbjct: 420 SRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDE 479
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ LID+YSKC + A VF +I DK+++ WT++ G + + E+L ++ + M
Sbjct: 480 FAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMS 539
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
LKPN T ++++A + I +L G++ H +++G D F+ N L+DMY + G ++ A
Sbjct: 540 RLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEA 599
Query: 554 WNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F ++N +D + WN ++ YA+ G+ A + F MI K N+ +G+ C
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSAC 656
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 240/460 (52%), Gaps = 4/460 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L + K + HA +F M ++L +W+ ++ Y EAL L+ +
Sbjct: 76 LVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSC 135
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KP+ Y V+R C L ++H V++ GY DV V +LI Y K + A
Sbjct: 136 NEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDA 195
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RL+FDG+ + +W +I+GY + G L LF M+E V PD LSSV+SA ++
Sbjct: 196 RLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLML 255
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++H YV++ G DVS+ N I Y + G K+F RM K+VVSWTT+I
Sbjct: 256 KFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVI 315
Query: 372 S-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ C + S D A++ + M G PD SVL++C L L+ G ++H A++ +
Sbjct: 316 AGCMQNSFHRD-ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNI 374
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + N LIDMY+KC + A +VF+ + +++S+ ++I G ++ EAL FR+
Sbjct: 375 DNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFRE 434
Query: 491 MMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L+L P + VS+L A + L +IH ++ GV+ D F +AL+D+Y +C R
Sbjct: 435 MRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR 494
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ A F ++D+ W + +GY ++ + + + ++
Sbjct: 495 VGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYK 534
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 229/447 (51%), Gaps = 2/447 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G + +LK D M+E ++C D+ L +++ C + + G +H V ++ + V +
Sbjct: 220 QGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSM 279
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N F+ + K + +F +M D+++ SW +I G + F +AL L+ M +G
Sbjct: 280 VNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGW 339
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD + VL +CG + L++G++VH + I+ + D V N LI MY KC L AR
Sbjct: 340 -NPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDAR 398
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ M D +S+NAMI GY + + L LF MR L P + S++ S +
Sbjct: 399 KVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLY 458
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+L ++HG +IK G S D + LI +Y + VF ++ KD+V WT M S
Sbjct: 459 HLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFS 518
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +++++ Y+ ++ P+E T A+V++A + + +L G + H ++ G
Sbjct: 519 GYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDD 578
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ANTL+DMY+K I++A + F K+ W S+I + + +AL F M+
Sbjct: 579 DPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMI 638
Query: 493 LN-LKPNSVTLVSILSACARIGALMCG 518
+ LKPN VT V +LSAC+ G L G
Sbjct: 639 MEGLKPNYVTFVGVLSACSHTGLLDLG 665
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 209/384 (54%), Gaps = 4/384 (1%)
Query: 211 PDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
P + K++H ++ FG+ D+ +VN L+ Y K + A +FD M ++ ++W++M
Sbjct: 52 PHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSM 111
Query: 270 ISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
+S Y + ++ LMLF+ MR P+ L+SV+ A G ++HG V+K G
Sbjct: 112 VSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGG 171
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ DV VC LI Y ++ +F ++ K +WTT+I+ Y +++ +
Sbjct: 172 YVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFD 231
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ PD+ ++SVLSAC L L+ G ++H +R+G++ + + N ID Y KC
Sbjct: 232 QMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCH 291
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILS 507
+ ++F ++ DKNV+SWT++I G N+ +AL F +M + P++ S+L+
Sbjct: 292 KVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLN 351
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSA 566
+C + AL G+++HA+A+++ + D F+ N L+DMY +C + A FN D+ +
Sbjct: 352 SCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVS 411
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
+N ++ GY+ + + A + FR+M
Sbjct: 412 YNAMIEGYSRQDKLCEALDLFREM 435
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 22/316 (6%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY-------L 117
SR ++LC + LD +E+ + + L+ V L G LY +
Sbjct: 420 SRQDKLC---------EALDLFREMRLSLSSPTLLIFVSLL----GVSASLYHLELSNQI 466
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H ++ K L G+A + ++ K +G A VF ++ D+D+ W + GY +
Sbjct: 467 HGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSEN 526
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+E+L LY + + +KP+ +TF V+ + L+ G++ H VI+ G++ D V N
Sbjct: 527 EESLKLY-KCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANT 585
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY K G + A F +D WN+MI+ Y ++GE K L +F M + P+
Sbjct: 586 LVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPN 645
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
++T V+SA G LG + + + G + ++ + G E ++
Sbjct: 646 YVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIE 705
Query: 358 RMESKD-VVSWTTMIS 372
+M K V W +++S
Sbjct: 706 KMPIKQAAVVWRSLLS 721
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 299/576 (51%), Gaps = 36/576 (6%)
Query: 36 TRHFSSKNAQSVQVLNT----QNTSSIATKNPNSR--------LNELCLNGSLEQALKYL 83
TRH + K+ Q N Q+ ++ ++P LN L +G+ Q+L++
Sbjct: 3 TRHLNFKSKQRFPTFNFFRSFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAF-QSLRFF 61
Query: 84 DSMQE--LNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVV--SKTMSHLSVRLGNAFLS 138
+ L+ DE LV ++ C G+ + G +H V S +SH++V N+ ++
Sbjct: 62 KNNFRWGLDGNADEFTLVLALKAC---CGFPKLGRQIHGFVISSGFVSHITV--SNSLMN 116
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A+ VF + D D+ SWN ++ G+ K+ + ALS RM + GVK D
Sbjct: 117 MYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENALSFALRMN-LNGVKFDSV 172
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T+ L C + G ++H ++ G++ DV V NAL+TMY + LV AR VFD M
Sbjct: 173 TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEM 232
Query: 259 PKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
P RDR+SW+AMI+GY + G+ ++ +++F+ M V D + ++ +S + +LG
Sbjct: 233 PSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELG 292
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++H +K G SV N LI Y E+ + VF + ++V+SWTTMIS YE
Sbjct: 293 KQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYE-- 350
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ AV + M +G P+++T +L A ++ G+ +H L ++ +S + +
Sbjct: 351 ---EGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVG 407
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
N+LI MY+K + + A VF ++P + +ISW ++I G N EAL F ++ KP
Sbjct: 408 NSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKP 467
Query: 498 NSVTLVSILSA--CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
N T S+L+A +L G+ H+H +++G+ D + ALLDMY + G ++ +
Sbjct: 468 NEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQR 527
Query: 556 QFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKM 590
FN + AW L++GYA+ G + F +M
Sbjct: 528 VFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEM 563
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 257/525 (48%), Gaps = 44/525 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICV----------DEDALVNLVRLCEWKRGYDE 113
NS +N C +G LE+A ++ + +I E+AL +R+ +D
Sbjct: 112 NSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDS 171
Query: 114 ------------------GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
G LH++ K V +GNA ++M+ ++ L A VF +
Sbjct: 172 VTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDE 231
Query: 156 MCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
M RD SW+ +I GYA+ G +A+ ++ +M GVK D L CG +L+
Sbjct: 232 MPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMV-REGVKFDNVPITGALSVCGHERNLE 290
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
GK++H ++ G+E V N LI+ Y KC + A+ VF+ + R+ ISW MIS Y
Sbjct: 291 LGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYE 350
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
E + LF MR V P+ +T ++ A + + G VHG IK F +++
Sbjct: 351 EGA-----VSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELT 405
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET--YQMMEA 392
V N LI MY F ++ +VF + ++++SW +IS Y + L +A+E Y +ME
Sbjct: 406 VGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEY 465
Query: 393 EGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ P+E T SVL+A + ++ L G + H ++ GL II+ L+DMY+K I
Sbjct: 466 K---PNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSI 522
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
++ VF++ ++ +WT++I G + + F +M +KP++V +S+L+AC
Sbjct: 523 QESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTAC 582
Query: 510 ARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPA 553
+R + G++ ++ + +G + ++DM R GR++ A
Sbjct: 583 SRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEA 627
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 197/404 (48%), Gaps = 18/404 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QA+ M + D + + +C +R + G +H + KT +GN +
Sbjct: 256 QAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLI 315
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S + K + A VF + DR++ SW +I Y + A+SL+ +M + GV P+
Sbjct: 316 STYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKM-RLDGVYPND 369
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L +++G VH I+ + +++ V N+LITMY K + A VF
Sbjct: 370 VTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIE 429
Query: 258 MPKRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+P R+ ISWNA+ISGY +N + L L+ +M + F ++ + ISA E + K
Sbjct: 430 LPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKPNEYTFGSVLNAISAGEDI-SLK 488
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ H ++IK+G + D + L+ MY G+ +E ++VF+ + +WT +IS Y
Sbjct: 489 HGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYA 548
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS--- 432
+ ++ ++ ME E PD + SVL+AC+ +D+G + + ++ +I
Sbjct: 549 QHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEG 608
Query: 433 --YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
Y + ++DM + +++A E+ +IP +S +LG
Sbjct: 609 EHY----SCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLG 648
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 5/293 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E A+ + M+ + ++ + L+ + ++GL +H + K + +GN+
Sbjct: 351 EGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSL 410
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ KF + A VF ++ R++ SWN LI GYA+ EAL + ++ + KP+
Sbjct: 411 ITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF--LYAIMEYKPN 468
Query: 197 VYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
YTF VL D LK G+ H H+I+ G D + AL+ MY K G + ++ V
Sbjct: 469 EYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRV 528
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ K+ + +W A+ISGY ++G+Y + LF M + + PD + SV++A
Sbjct: 529 FNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMV 588
Query: 315 KLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+GR+ +IK + + ++ M G EE E++ +R+ VS
Sbjct: 589 DMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVS 641
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 272/514 (52%), Gaps = 14/514 (2%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+E I D+ + +LV C + +EG LH + T + L A L M+ K G
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A VF M +DLF+W+ +I YA+AG + A+ LY+RM GV+P+V TF C L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMI-AEGVEPNVVTFACALG 119
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C V L G+ +H ++ D + ++L+ MY+KC ++V AR VF+GM R+ S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
+ AMIS Y + GE+ + L LF M +V ++P+ T ++++ A E +G+ + GR+VH ++
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
GF +V V N L+ MY G+ E KVF M +++V+SWT+MI+ Y P +A+
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
++ M+ E P ++ +S L+ACA LG LD G ++H + L S + +L+ MY
Sbjct: 300 NLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAHLAS-PQMETSLLSMY 355
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLV 503
++C +D A VF+++ ++ S ++I + R +AL +R+M P + +T V
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFV 415
Query: 504 SILSACARIGALM-CGKEIHAHALRIGVA--FDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
S+L AC+ + C + + GV + +L ++D+ R GR+ A +
Sbjct: 416 SVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYL--CMVDVLGRSGRLGDAEELVETM 473
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ D AW LL+G G E RK+ +
Sbjct: 474 PYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFE 507
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/541 (29%), Positives = 281/541 (51%), Gaps = 9/541 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++A + M + L +++ C + + +G +H+ V K +
Sbjct: 122 SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
GNA +++++ FG A VF M CDR F N LI G+A+ G + AL ++ M +
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTF--NTLISGHAQCGHGECALQIFDEM-QL 238
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G++PD T +L C V DL++GK++H ++++ G D +L+ +YVKCGD+
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F+ + + + WN M+ Y + + K +F M+ + P+ T ++
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G +LG ++H IK GF D+ V LI MY +G ++ K+ +E +DVVSWT+M
Sbjct: 359 TGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSM 418
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y ++A+ T++ M+ G PD I +AS SACA + + G+++H +G
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I I NTL+++Y++C ++A +F +I K+ I+W +I G + +AL+ F K
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK 538
Query: 491 M-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M K N T +S +SA A + + GK++H A++ G + + NAL+ +Y +CG
Sbjct: 539 MGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRK 606
++ A F+ + R+ +WN ++T ++ G+G A + F +M K N +G+
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
Query: 607 C 607
C
Sbjct: 659 C 659
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 248/461 (53%), Gaps = 3/461 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA++G EA LY +M W
Sbjct: 80 IGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTA 139
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P Y VL C +G+ +H V + + ++ V NALI +Y+ G A
Sbjct: 140 -VIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLA 198
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF M DR+++N +ISG+ + G L +F M+ + PD +T++S+++A V
Sbjct: 199 ERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASV 258
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G+++H Y++K G S D L+ +Y+ G+ E +F+ + +VV W M+
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y K+ E + M+A G P++ T +L C C G ++LG ++H L+++ G
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK C+DKA ++ + ++V+SWTS+I G ++ EAL F++M
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S SACA I A+ G +IHA G A D + N L+++Y RCGR
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A++ F E +D WN L++G+ + A F KM
Sbjct: 499 EEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKM 539
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 232/441 (52%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E AL+ D MQ + D + +L+ C +G LHS + K
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITE 283
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ Y + ++ ++ +M G+
Sbjct: 284 GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM-QATGI 342
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +T+PC+LRTC ++ G+++H I+ G+E+D+ V LI MY K G L +AR
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK 402
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ + + KRD +SW +MI+GY ++ + L F M++ V PD + L+S SA +
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H V G++ D+S+ N L+ +Y G EE +F +E KD ++W +IS
Sbjct: 463 MRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISG 522
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L +A+ + M G+ + T S +SA A L ++ G ++H A++TG S
Sbjct: 523 FGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSE 582
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+AN LI +Y KC I+ A +F ++ +N +SW +II + R EAL F +M
Sbjct: 583 TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ 642
Query: 493 LNLKPNSVTLVSILSACARIG 513
LKPN VT + +L+AC+ +G
Sbjct: 643 EGLKPNDVTFIGVLAACSHVG 663
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 200 FPCVLRTCGGVPDLKRGK------EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
C L+ C G RG E+H + G AD + N LI +Y K G + +AR
Sbjct: 45 LTCALQACRG-----RGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQ 99
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + RD +SW AM+SGY ++G + L+ M V P LSSV+SA
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR +H V K F + V N LI +YL FG+ + E+VF M D V++ T+IS
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + A++ + M+ G PD +T+AS+L+ACA +G+L G +LH ++ G+
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNN--RSFEALIFFRK 490
I +L+D+Y KC I+ A ++F+ NV+ W +++ ++++ +SFE IF +
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE--IFGQM 337
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ PN T IL C G + G++IH+ +++ G D ++ L+DMY + G +
Sbjct: 338 QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCL 397
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
A E RDV +W ++ GY + A F++M D G W +GL
Sbjct: 398 DKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC-GVWPDNIGL 450
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 266/549 (48%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C G ++++ M + D L++ C G+ +H++ K
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 177
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + VR G+A + M+ K L A F M +R+ SW I G + + L L
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 237
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ M +G GV Y R+C + L G+++H H I+ + +D V A++ +Y
Sbjct: 238 FIEMQRLGLGVSQPSYA--SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K L AR F G+P + NAM+ G G ++ + LF M + D ++LS
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V SA G++VH IK GF D+ V N ++ +Y E +F M+ K
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + D + + M G PD+ T SVL ACA L +L+ G+ +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++GL S +A+T++DMY KC ID+A ++ +I + V+SW +I+ G LN S
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FF +M+ + LKP+ T ++L CA + + GK+IH ++ + D ++ + L+
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 595
Query: 542 DMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWR 598
DMY +CG M + F E RD +WN ++ GYA G G A F +M N
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 656 TFVAVLRAC 664
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 243/461 (52%), Gaps = 3/461 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L+ + GD+ A +F M D D+ SWN L+ GY + G F E++ L+ M GV
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGV 145
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD TF +L++C + +L G +VH ++ G E DV +AL+ MY KC L A
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F GMP+R+ +SW A I+G +N +Y++GL LFI M+ + + + +S + +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H + IK FS D V ++ +Y + + + F + + V + M+
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ L +A+ +Q M D ++++ V SACA G ++H LA+++G
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
I + N ++D+Y KCK + +A +F + K+ +SW +II L N + ++ F +M+
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KP+ T S+L ACA + +L G +H ++ G+ D F+ + ++DMY +CG +
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A + + V +WN +L+G++ + A++FF +M+D
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLD 546
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 2/442 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L+ MQ L + V + + + R C + G LH+ K +
Sbjct: 228 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 287
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K L A F + + + + N ++ G +AG EA+ L+Q M
Sbjct: 288 GTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SS 346
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ DV + V C +G++VH I+ G++ D+ V NA++ +Y KC L+ A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 406
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F GM ++D +SWNA+I+ +NG Y ++ F M + PD T SV+ A +
Sbjct: 407 LIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 466
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G VH VIK G D V + ++ MY G +E +K+ R+ + VVSW ++S
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + ++A + + M G PD T A+VL CA L ++LG ++H ++ ++
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 586
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++TL+DMY+KC + +L VF ++ ++ +SW ++I G L+ EAL F +M
Sbjct: 587 DEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ 646
Query: 493 L-NLKPNSVTLVSILSACARIG 513
N+ PN T V++L AC+ +G
Sbjct: 647 KENVVPNHATFVAVLRACSHVG 668
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M +I D +L + C +GY +G +H + K+ + + + NA L
Sbjct: 334 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 393
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K L A+ +F M +D SWN +I + G +D+ + + M G +KPD
Sbjct: 394 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG-MKPDD 452
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C + L+ G VH VI+ G +D V + ++ MY KCG + A+ + D
Sbjct: 453 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + +SWNA++SG+ N E + F M ++ + PD T ++V+ + +LG
Sbjct: 513 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG 572
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++HG +IK DD + + L+ MY G+ + VF ++E +D VSW MI Y
Sbjct: 573 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 632
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L +A+ ++ M+ E +P+ T +VL AC+ +G D G + H + L +
Sbjct: 633 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEH 692
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
++D+ + K +A++ + +P + + W +++
Sbjct: 693 FACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N ++ Y G+ +F M DVVSW ++S Y + ++V+ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T A +L +C+ L L LG+++H LA++TGL + + L+DMY KC+ +D AL
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
F+ +P++N +SW + I G N + L F +M L L + + S +CA + L
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGY 574
G+++HAHA++ + D + A++D+Y + + A F V N ++ G
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G G A F+ MI S + + L G+F C
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC 361
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 266/549 (48%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C G ++++ M + D L++ C G+ +H++ K
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 177
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + VR G+A + M+ K L A F M +R+ SW I G + + L L
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 237
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ M +G GV Y R+C + L G+++H H I+ + +D V A++ +Y
Sbjct: 238 FIEMQRLGLGVSQPSYA--SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 295
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K L AR F G+P + NAM+ G G ++ + LF M + D ++LS
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 355
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V SA G++VH IK GF D+ V N ++ +Y E +F M+ K
Sbjct: 356 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 415
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + D + + M G PD+ T SVL ACA L +L+ G+ +H
Sbjct: 416 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++GL S +A+T++DMY KC ID+A ++ +I + V+SW +I+ G LN S
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FF +M+ + LKP+ T ++L CA + + GK+IH ++ + D ++ + L+
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 595
Query: 542 DMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWR 598
DMY +CG M + F E RD +WN ++ GYA G G A F +M N
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 656 TFVAVLRAC 664
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 243/461 (52%), Gaps = 3/461 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L+ + GD+ A +F M D D+ SWN L+ GY + G F E++ L+ M GV
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMAR-RGV 145
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD TF +L++C + +L G +VH ++ G E DV +AL+ MY KC L A
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F GMP+R+ +SW A I+G +N +Y++GL LFI M+ + + + +S + +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H + IK FS D V ++ +Y + + + F + + V + M+
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ L +A+ +Q M D ++++ V SACA G ++H LA+++G
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
I + N ++D+Y KCK + +A +F + K+ +SW +II L N + ++ F +M+
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KP+ T S+L ACA + +L G +H ++ G+ D F+ + ++DMY +CG +
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A + + V +WN +L+G++ + A++FF +M+D
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLD 546
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 2/442 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L+ MQ L + V + + + R C + G LH+ K +
Sbjct: 228 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 287
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K L A F + + + + N ++ G +AG EA+ L+Q M
Sbjct: 288 GTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SS 346
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ DV + V C +G++VH I+ G++ D+ V NA++ +Y KC L+ A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 406
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F GM ++D +SWNA+I+ +NG Y ++ F M + PD T SV+ A +
Sbjct: 407 LIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 466
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G VH VIK G D V + ++ MY G +E +K+ R+ + VVSW ++S
Sbjct: 467 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 526
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + ++A + + M G PD T A+VL CA L ++LG ++H ++ ++
Sbjct: 527 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 586
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++TL+DMY+KC + +L VF ++ ++ +SW ++I G L+ EAL F +M
Sbjct: 587 DEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ 646
Query: 493 L-NLKPNSVTLVSILSACARIG 513
N+ PN T V++L AC+ +G
Sbjct: 647 KENVVPNHATFVAVLRACSHVG 668
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M +I D +L + C +GY +G +H + K+ + + + NA L
Sbjct: 334 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 393
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K L A+ +F M +D SWN +I + G +D+ + + M G +KPD
Sbjct: 394 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG-MKPDD 452
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C + L+ G VH VI+ G +D V + ++ MY KCG + A+ + D
Sbjct: 453 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + +SWNA++SG+ N E + F M ++ + PD T ++V+ + +LG
Sbjct: 513 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG 572
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++HG +IK DD + + L+ MY G+ + VF ++E +D VSW MI Y
Sbjct: 573 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 632
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L +A+ ++ M+ E +P+ T +VL AC+ +G D G + H + L +
Sbjct: 633 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEH 692
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
++D+ + K +A++ + +P + + W +++
Sbjct: 693 FACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 729
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N ++ Y G+ +F M DVVSW ++S Y + ++V+ + M G
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T A +L +C+ L L LG+++H LA++TGL + + L+DMY KC+ +D AL
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
F+ +P++N +SW + I G N + L F +M L L + + S +CA + L
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGY 574
G+++HAHA++ + D + A++D+Y + + A F V N ++ G
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 326
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G G A F+ MI S + + L G+F C
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC 361
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 247/472 (52%), Gaps = 12/472 (2%)
Query: 133 GNAFLSMFVKFGDLGHAWY---VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
G+ ++ V + GH Y +F +M L S+N++I Y + G + +A++++ RM
Sbjct: 49 GHILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMV- 107
Query: 190 VGGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G+K PD YT+P V + G + + G +H ++R + D V NAL+ MY+ G
Sbjct: 108 SEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGR 167
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD M RD ISWN MISGY+ NG LM+F M VDPD T+ S++
Sbjct: 168 VEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPV 227
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ ++GR VH V + D + V N L+ MYL G +E VF RME +DV++W
Sbjct: 228 CGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITW 287
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI+ Y + A+E ++M+ EG P+ +TIAS++SAC L+ G LH A+R
Sbjct: 288 TCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIR 347
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ S III +LI MY+KCK ID VF + W++II G N +AL
Sbjct: 348 QKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDL 407
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M +++PN TL S+L A A + L IH + + G L+ +Y +
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 547 CGRMKPAWNQFNS-----NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG ++ A FN +DV W L++GY G G A + F +M+ S
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 252/504 (50%), Gaps = 15/504 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H + ++ + + NA L+M++ FG + A VF M +RD+ SWN +I GY +
Sbjct: 136 GLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYR 195
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ ++AL ++ M GV PD T +L CG + L+ G+ VH V ++
Sbjct: 196 NGYMNDALMMFDWMV-NEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIE 254
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY+KCG + AR VF M +RD I+W MI+GY E+G+ L L +M+
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEG 314
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ +T++S++SA G+ +HG+ I+ D+ + LI MY + +
Sbjct: 315 VRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCF 374
Query: 354 KVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VFS W+ +I+ C + ++ D A++ ++ M E P+ T+ S+L A A L
Sbjct: 375 RVFSGASRNHTGPWSAIIAGCVQNELVRD-ALDLFKRMRREDVEPNIATLNSLLPAYATL 433
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD----KNVISW 468
+L + +H +TG +S + A L+ +YSKC ++ A ++F+ I + K+V+ W
Sbjct: 434 ADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL- 526
++I G ++ AL F +M+ + + PN +T S L+AC+ G + G + + L
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLE 553
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAE 584
++D+ R GR+ A+N + E + W LL L E
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGE 613
Query: 585 ----EFFRKMIDSKGNWRKLMGLF 604
+ F ++ GN+ L ++
Sbjct: 614 MAANKLFELEPENTGNYVLLANIY 637
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 213/452 (47%), Gaps = 18/452 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL D M + D +V+++ +C +G + G +H +V + + +
Sbjct: 196 NGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEV 255
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M++K G + A +VFG+M RD+ +W +I GY + G + AL L R+ G
Sbjct: 256 KNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELC-RLMQFEG 314
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ T ++ CG L GK +H IR +D+ + +LI+MY KC +
Sbjct: 315 VRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCF 374
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF G + W+A+I+G +N L LF MR V+P+ TL+S++ A +
Sbjct: 375 RVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLA 434
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS----RMESKDVVSWT 368
D + +H Y+ K GF + L+ +Y G E K+F+ + +SKDVV W
Sbjct: 435 DLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS Y A++ + M G P+EIT S L+AC+ G ++ G+ L +
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLE- 553
Query: 429 GLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
Y +A + ++D+ + +D+A + IP + + +L + + + +
Sbjct: 554 ---HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQ 610
Query: 484 ALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+ L+P N V L +I +A R
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGR 642
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 252/473 (53%), Gaps = 8/473 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
G +E + + ++ + H +V + N+ +S + + GDL A VF + ++DL SWN ++
Sbjct: 22 GREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVV 81
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y++ G +E L L+++M V+PD T+ +L C + L+ GKEVH V R ++
Sbjct: 82 AYSQHGHGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGKEVHARVSRSRFK 137
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+D + ALI MY KCG L AR VFDG+ D WNAMISG ++G + L LF M
Sbjct: 138 SDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERM 197
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ V D ++ +++SA + D G +H + G D+ V + MY
Sbjct: 198 KAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQV 257
Query: 350 EEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ K+F M E +VVSW +MI+ Y S +A+E Y++M+ EG PD+IT A L A
Sbjct: 258 DLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGA 317
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C G G ++H + + + + + +++MY+KC ++ A+ F ++ KN ++W
Sbjct: 318 CTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTW 377
Query: 469 TSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
++++ EAL ++ R + +P+ +TL L+AC+RIGAL GK IH+
Sbjct: 378 SAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQA 437
Query: 528 IGVAFDG-FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
+ FL N+LL+MY +CG + A F N RD +WN ++ G+A G
Sbjct: 438 TETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHG 490
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 212/403 (52%), Gaps = 9/403 (2%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ TF V +C G +L + + + ++V V N+L++ Y + GDL A
Sbjct: 5 GFRPNGVTFSGVASSCSGREELD---TIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSA 61
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD + +D ISWN+M+ Y ++G + L LF R++ V+PD +T +S++ A +
Sbjct: 62 RKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELF---RKMDVEPDSITYASILGACSAM 118
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+LG+EVH V + F D ++ LI MY G E +VF ++S D W MI
Sbjct: 119 ELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMI 178
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S +A+ ++ M+AE D+++ ++LSAC L +L GI++H+ A G+
Sbjct: 179 SGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMD 238
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRK 490
+++ + +MYSKC+ +D A ++F + +K NV+SW S+I + R EAL +
Sbjct: 239 KDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYEL 298
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M ++P+ +T L AC G G EIH+ + D FL A+++MY +CG
Sbjct: 299 MKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGE 358
Query: 550 MKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A + F R + W+ ++ + ++G A + + +M+
Sbjct: 359 LETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMV 401
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 219/440 (49%), Gaps = 4/440 (0%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L+ +++++ D +++ C + G +H+ VS++ L A ++M+ K
Sbjct: 93 LELFRKMDVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSK 152
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A VF + D WN +I G + G EAL L++RM V+ D ++
Sbjct: 153 CGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERM-KAESVRIDKVSYLT 211
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKR 261
+L C + DL G +H H G + D+ V A+ MY KC + AR +FDGM K
Sbjct: 212 ILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKT 271
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ +SWN+MI+ Y ++G + L L+ +M+E V PD +T + + A G G E+H
Sbjct: 272 NVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIH 331
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+ + DV + ++ MY G E F +M K+ V+W+ M+ +
Sbjct: 332 SRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDR 391
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTL 440
+A++ Y M +EG P EIT+A L+AC+ +G L G +H T L + + + N+L
Sbjct: 392 EALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSL 451
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
++MY+KC C+ A +F + ++ SW +II+G + E L +M+ + + P+
Sbjct: 452 LNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDY 511
Query: 500 VTLVSILSACARIGALMCGK 519
VT +L AC+ G L G+
Sbjct: 512 VTFACVLLACSHAGLLDRGR 531
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G +AL+ + M+E + D+ + C G +G +HS +++
Sbjct: 277 NSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITE 336
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V L A ++M+ K G+L A F KM ++ +W+ ++G + + G+ EAL L
Sbjct: 337 SKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDL 396
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMY 242
Y RM G +P T L C + L+ GK +H + + + + N+L+ MY
Sbjct: 397 YLRMV-SEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 455
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG L A +F + +RD SWN +I G+ +G+ + L L M + VDPD++T +
Sbjct: 456 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFA 515
Query: 303 SVISASELVGDEKLGR 318
V+ A G GR
Sbjct: 516 CVLLACSHAGLLDRGR 531
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 491 MMLNLKPNSVTLVSILSACA------RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
++ +PN VT + S+C+ I A + + H++ + + N+L+ Y
Sbjct: 2 LLEGFRPNGVTFSGVASSCSGREELDTIQASIAASDFHSNVV---------VKNSLVSAY 52
Query: 545 VRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
R G ++ A F+S E +D+ +WN ++ Y++ G G E FRKM
Sbjct: 53 TRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM 99
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/549 (30%), Positives = 266/549 (48%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C G ++++ M + D L++ C G+ +H++ K
Sbjct: 160 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 219
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + VR G+A + M+ K L A F M +R+ SW I G + + L L
Sbjct: 220 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 279
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ M +G GV Y R+C + L G+++H H I+ + +D V A++ +Y
Sbjct: 280 FIEMQRLGLGVSQPSYA--SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVY 337
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K L AR F G+P + NAM+ G G ++ + LF M + D ++LS
Sbjct: 338 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLS 397
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V SA G++VH IK GF D+ V N ++ +Y E +F M+ K
Sbjct: 398 GVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK 457
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ E + D + + M G PD+ T SVL ACA L +L+ G+ +H
Sbjct: 458 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 517
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++GL S +A+T++DMY KC ID+A ++ +I + V+SW +I+ G LN S
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 577
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FF +M+ + LKP+ T ++L CA + + GK+IH ++ + D ++ + L+
Sbjct: 578 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 637
Query: 542 DMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWR 598
DMY +CG M + F E RD +WN ++ GYA G G A F +M N
Sbjct: 638 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 697
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 698 TFVAVLRAC 706
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 243/461 (52%), Gaps = 3/461 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L+ + GD+ A +F M D D+ SWN L+ GY + G F E++ L+ M GV
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA-RRGV 187
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD TF +L++C + +L G +VH ++ G E DV +AL+ MY KC L A
Sbjct: 188 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 247
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F GMP+R+ +SW A I+G +N +Y++GL LFI M+ + + + +S + +
Sbjct: 248 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 307
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H + IK FS D V ++ +Y + + + F + + V + M+
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ L +A+ +Q M D ++++ V SACA G ++H LA+++G
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 427
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
I + N ++D+Y KCK + +A +F + K+ +SW +II L N + ++ F +M+
Sbjct: 428 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 487
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KP+ T S+L ACA + +L G +H ++ G+ D F+ + ++DMY +CG +
Sbjct: 488 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 547
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A + + V +WN +L+G++ + A++FF +M+D
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLD 588
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 224/442 (50%), Gaps = 2/442 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L+ MQ L + V + + + R C + G LH+ K +
Sbjct: 270 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 329
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K L A F + + + + N ++ G +AG EA+ L+Q M
Sbjct: 330 GTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR-SS 388
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ DV + V C +G++VH I+ G++ D+ V NA++ +Y KC L+ A
Sbjct: 389 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAY 448
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F GM ++D +SWNA+I+ +NG Y ++ F M + PD T SV+ A +
Sbjct: 449 LIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALR 508
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G VH VIK G D V + ++ MY G +E +K+ R+ + VVSW ++S
Sbjct: 509 SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 568
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + ++A + + M G PD T A+VL CA L ++LG ++H ++ ++
Sbjct: 569 GFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 628
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++TL+DMY+KC + +L VF ++ ++ +SW ++I G L+ EAL F +M
Sbjct: 629 DEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQ 688
Query: 493 L-NLKPNSVTLVSILSACARIG 513
N+ PN T V++L AC+ +G
Sbjct: 689 KENVVPNHATFVAVLRACSHVG 710
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M +I D +L + C +GY +G +H + K+ + + + NA L
Sbjct: 376 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 435
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K L A+ +F M +D SWN +I + G +D+ + + M G +KPD
Sbjct: 436 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG-MKPDD 494
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C + L+ G VH VI+ G +D V + ++ MY KCG + A+ + D
Sbjct: 495 FTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 554
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + +SWNA++SG+ N E + F M ++ + PD T ++V+ + +LG
Sbjct: 555 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG 614
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++HG +IK DD + + L+ MY G+ + VF ++E +D VSW MI Y
Sbjct: 615 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 674
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L +A+ ++ M+ E +P+ T +VL AC+ +G D G + H + L +
Sbjct: 675 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEH 734
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
++D+ + K +A++ + +P + + W +++
Sbjct: 735 FACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 771
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N ++ Y G+ +F M DVVSW ++S Y + ++V+ + M G
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T A +L +C+ L L LG+++H LA++TGL + + L+DMY KC+ +D AL
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 248
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
F+ +P++N +SW + I G N + L F +M L L + + S +CA + L
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 308
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGY 574
G+++HAHA++ + D + A++D+Y + + A F V N ++ G
Sbjct: 309 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL 368
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G G A F+ MI S + + L G+F C
Sbjct: 369 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSAC 403
>gi|359473776|ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Vitis vinifera]
Length = 835
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 261/499 (52%), Gaps = 7/499 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L L G L++A +L M + ++ V + L C R +G +H + +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T+ + S + N L M+ G VF +M ++L SW ++I YAK G ++A+ L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G++P+ + +L++C G L+ GK++H HVIR A++ V A+ MYV
Sbjct: 176 FSDM-QASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV 234
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG L A+LVFDGM ++ ++W ++ GY + + L LF M V+ D S
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + D +GR++H +++K+G +VSV PL+ Y+ G+ E + F R+ +
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW+ +IS + S + ++ + + +EG + + SV ACA NL++G + H
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++ GL+SY+ + ++ MYSKC +D A F I + + ++WT+II G + + E
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNA 539
AL FFR+M ++PN+VT +++L+AC+ G + K+ R + D + +
Sbjct: 475 ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHY--DC 532
Query: 540 LLDMYVRCGRMKPAWNQFN 558
++D Y R G ++ A N
Sbjct: 533 MIDTYSRAGLLQEALELIN 551
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 211/428 (49%), Gaps = 3/428 (0%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K G EA + M V +++ C+ CG + L G+ +H +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMD-DADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
R + N L+ MY CG + + VFD M ++ +SW +IS Y +NGE K +
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M+ + P+ S++ + +LG+++H +VI+ + +++V + MY+
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV 234
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E + VF M++++ V+WT ++ Y + + A+E + M EG DE +
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL C L + D+G ++H ++ G S + + L+D Y KC I+ A F +I + N
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW+++I G + R + + F + + NS S+ ACA L G + H
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
A++ G+ + +A++ MY +CGR+ A F S +E D AW +++GYA G A
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474
Query: 583 AEEFFRKM 590
A FFR+M
Sbjct: 475 ALGFFRRM 482
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 200/389 (51%), Gaps = 2/389 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG LE+A++ MQ I + ++L++ C + G +HS V + + ++ +
Sbjct: 166 NGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITV 225
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A +M+V+ G L A VF M ++ +W L+ GY +A + AL L+ RM + G
Sbjct: 226 ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMA-MEG 284
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+ D + F VL+ C G+ D G+++H H+++ G E++V V L+ YVKCGD+ A
Sbjct: 285 VELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAY 344
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F + + + +SW+A+ISG+ ++G + +F +R V + +SV A
Sbjct: 345 RSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQA 404
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +G + HG IK G + + ++ MY G + + F ++ D V+WT +IS
Sbjct: 405 NLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIIS 464
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y +A+ ++ M++ G P+ +T +VL+AC+ G + + L ++ G+
Sbjct: 465 GYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVK 524
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQI 460
I + +ID YS+ + +ALE+ ++I
Sbjct: 525 PTIDHYDCMIDTYSRAGLLQEALELINRI 553
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 278/550 (50%), Gaps = 9/550 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG + + M + D +++ C + G+ +H + K
Sbjct: 143 NSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK 202
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A L M+ K L + F M +++ SW+ +I G + L L
Sbjct: 203 MGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M GV TF V R+C G+ L+ G ++H H ++ + DV + A + MY+
Sbjct: 263 FKEM-QKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYM 321
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC +L A+ +F+ +P + S+NA+I GY + + ++ L +F ++++ + D ++LS
Sbjct: 322 KCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG 381
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
A ++ + G +VHG +K ++ V N ++ MY G E VF M S+D
Sbjct: 382 AFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRD 441
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW +I+ +E + +K + + M G PDE T SVL ACA L+ G+++H
Sbjct: 442 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN 501
Query: 424 --LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
+ R GL S++ IA LIDMYSKC ++KA ++ ++ ++ V+SW +II G L +S
Sbjct: 502 RIIKSRLGLDSFVGIA--LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 559
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA F KM+ + + P++ T +IL CA + + GK+IHA ++ + D ++ + L
Sbjct: 560 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 619
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNW 597
+DMY +CG M+ F + RD WN ++ GYA+ G G A + F M + K N
Sbjct: 620 VDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNH 679
Query: 598 RKLMGLFRKC 607
+ + R C
Sbjct: 680 ATFLAVLRAC 689
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 257/462 (55%), Gaps = 5/462 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L + GD+G A +F M +RD+ SWN LI GY G + + ++ +M +G V
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF VL++C + D G ++H ++ G++ DV +AL+ MY KC L +
Sbjct: 172 F-DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQ 230
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F MP+++ +SW+A+I+G +N + GL LF M++ V T +SV + +
Sbjct: 231 FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSA 290
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG ++HG+ +K F DV + + MY+ N + +K+F+ + + ++ S+ +I
Sbjct: 291 LRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVG 350
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLIS 432
Y S +A+ +++++ G DE++++ ACA + G+L+ G+++H L+M++ S
Sbjct: 351 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQS 409
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I +AN ++DMY KC + +A VF ++ ++ +SW +II N + L F M+
Sbjct: 410 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 469
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ ++P+ T S+L ACA AL CG EIH ++ + D F+ AL+DMY +CG M+
Sbjct: 470 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMME 529
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A + E+ V +WN +++G++ + Q A++ F KM++
Sbjct: 530 KAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLE 571
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 255/518 (49%), Gaps = 7/518 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L L+ MQ+ + V + ++ R C G LH KT V +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L M++K +L A +F + + +L S+N +I GYA++ EAL ++ R+ G
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF-RLLQKSG 371
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + R C + G +VH ++ ++++ V NA++ MY KCG LV A
Sbjct: 372 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 431
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF+ M RD +SWNA+I+ + +NG K L LF+ M + ++PD T SV+ A
Sbjct: 432 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 491
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G E+H +IK D V LI MY G E+ EK+ R+ + VVSW +IS
Sbjct: 492 ALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 551
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ ++A +T+ M G PD T A++L CA L ++LG ++H ++ L S
Sbjct: 552 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS 611
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++TL+DMYSKC + +F + P+++ ++W +++ G + EAL F M
Sbjct: 612 DAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ 671
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
L N+KPN T +++L AC +G + G + H++ D L + ++D+ R G+
Sbjct: 672 LENVKPNHATFLAVLRACGHMGLVEKGLH-YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 730
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+ A E D W LL+ G +AE+
Sbjct: 731 VSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEK 768
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 208/431 (48%), Gaps = 39/431 (9%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF + + C L GK+ H +I ++ V V N LI MY+KC DL A VFDGM
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 259 PKRDRISWNAM-------------------------------ISGYFENGEYMKGLMLFI 287
P+RD +SWNAM ISGY NG++ K + +F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + D T + V+ + + D G ++HG +KMGF DV + L+ MY
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGSMPDEITIAS 404
+ + F M K+ VSW+ +I+ G V D +E ++ M+ G + T AS
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIA---GCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
V +CA L L LG +LH A++T + ++I +DMY KC + A ++F+ +P+ N
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+ S+ +II+G +++ EAL FR + + L + V+L ACA I + G ++H
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGAL 582
+++ + + NA+LDMY +CG + A F RD +WN ++ + + G
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460
Query: 583 AEEFFRKMIDS 593
F M+ S
Sbjct: 461 TLSLFVWMLQS 471
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 256/480 (53%), Gaps = 33/480 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR------- 186
N LS K G + A +F M DRD SWN +IG YA +G +EA L+
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104
Query: 187 --------------------MFW---VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
+FW G +P+ +T+ VLR C L++GK++H H
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKG 282
I+ ++++ VV L+ MY KC ++ A +F+ P KR+ + W AM++GY +NG+ K
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ F MR ++ + T S+++A + G +VHG +++ GF +V V + L+ M
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDM 284
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G+ ++ ME D VSW +MI L ++A+ +++M DE T
Sbjct: 285 YSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY 344
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SVL+ + + ++ + +H L ++TG +Y ++ N L+DMY+K D A +VF ++ D
Sbjct: 345 PSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTD 404
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
K+VISWTS++ G N EAL F +M ++ + P+ + + ++LSACA + L GK++
Sbjct: 405 KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQV 464
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQG 580
HA+ L+ G+ + N+L+ MY +CG ++ A F+S E +DV W L+ GYA+ G+G
Sbjct: 465 HANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRG 524
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 243/470 (51%), Gaps = 15/470 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S ++ C G +AL+ MQ ++ +++R+C ++G +H+ K
Sbjct: 107 SSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIK 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALS 182
T + + + M+ K + A Y+F D R+ W ++ GY++ G +A+
Sbjct: 167 TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIE 226
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G++ + +TFP +L CG + G +VH ++R G+ A+V V +AL+ MY
Sbjct: 227 CFRDMRG-EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMY 285
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL AR + + M D +SWN+MI G G + L LF +M + D T
Sbjct: 286 SKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYP 345
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV++ V D + VH ++K GF V N L+ MY G + VF +M K
Sbjct: 346 SVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDK 405
Query: 363 DVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
DV+SWT++++ + GS ++A+ + M G PD+I IA+VLSACA L L+ G +
Sbjct: 406 DVISWTSLVTGCVHNGSY--EEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQ 463
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H +++GL S + + N+L+ MY+KC CI+ A +VF + ++VI+WT++I+G N R
Sbjct: 464 VHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR 523
Query: 481 SFE--ALI-----FFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ L+ +F+ M + +KP ++ R G LM KE+
Sbjct: 524 GRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKEL 573
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 173/358 (48%), Gaps = 3/358 (0%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N +I Y G L AR +F P R I+W+++ISGY G ++ L LF M+
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ T SV+ + + G+++H + IK F + V L+ MY E E +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 356 FSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F K + V WT M++ Y + KA+E ++ M EG ++ T S+L+AC +
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
G ++H +R+G + + + + L+DMYSKC + A + + + +SW S+I+G
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315
Query: 475 LRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
EAL FR M L ++K + T S+L+ + + + +H+ ++ G
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAY 375
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+DMY + G A++ F ++DV +W L+TG G A F +M
Sbjct: 376 KLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 433
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 157/329 (47%), Gaps = 15/329 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL M ++ +DE +++ + + +HS++ KT + NA
Sbjct: 323 EEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNAL 382
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G +A+ VF KM D+D+ SW L+ G G ++EAL L+ M + G+ PD
Sbjct: 383 VDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMR-IMGIHPD 441
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
VL C + L+ GK+VH + ++ G + + V N+L++MY KCG + A VFD
Sbjct: 442 QIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFD 501
Query: 257 GMPKRDRISWNAMISGYFENGE-------YMKGLMLFIMMREVL-VDPDFMTLSSVISAS 308
M +D I+W A+I GY +NG G F M EV + P + +I
Sbjct: 502 SMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMI--- 558
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS---RMESKDVV 365
+L+G E + +M D +V L+ GN E GE+ + +E K+ V
Sbjct: 559 DLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAV 618
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ + + Y + ++A +T ++M+ G
Sbjct: 619 PYVLLSNLYSAAGKWEEAAKTRRLMKLRG 647
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
S D + S LS C G +D KL + S+ NT+I Y+ +++A
Sbjct: 40 SSSDSNWVLSNLSKC---GRVDDARKLFDVMPDRDECSW----NTMIGAYANSGRLNEAR 92
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++F++ P ++ I+W+S+I G EAL F +M +PN T S+L C+
Sbjct: 93 KLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYV 152
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILL 571
L GK+IHAHA++ + F+ L+DMY +C + A F ++R+ W ++
Sbjct: 153 LLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMV 212
Query: 572 TGYAERGQGALAEEFFRKM 590
TGY++ G G A E FR M
Sbjct: 213 TGYSQNGDGHKAIECFRDM 231
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 295/565 (52%), Gaps = 9/565 (1%)
Query: 34 PKTRHFSSKNAQ--SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYL-DSMQELN 90
P+ FS A+ S ++LN+ S + + N+ N + + + K SM N
Sbjct: 10 PRAYAFSPFEAKPHSTEILNSPAFSPLKARPANTGFNSYPGHNAQDPNSKTTHSSMVYCN 69
Query: 91 ICVDEDALVN-LVRLCEWKRGYDE---GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
D++ L N +L + G + G +H+ ++K GN ++++ KF L
Sbjct: 70 SDSDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKL 129
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
G A VF +M R+ +W LI G+ + + + + M+WVG + + +T +L+
Sbjct: 130 GDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVG-EEFNEHTCSVILQA 188
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C + +L RG+++H VI+ G++ DV V +LI+MY +CGDL A V+ + +D
Sbjct: 189 CDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCL 248
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
N MIS Y + G K + +F+ + ++P+ T ++VISA D ++ R +HG IK
Sbjct: 249 NFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIK 308
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G D++SV N ++ +Y+ G EE EK F M +++VSWT ++S Y + KA+E
Sbjct: 309 CGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEG 368
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ + G D A++L C+ NL LG+++H ++ G + + + LID+Y+K
Sbjct: 369 FSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAK 428
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
C+ + A VFH + DKN++S+ +I+ G + +F + + ++KP+SVT +L
Sbjct: 429 CRKLRSARLVFHSLLDKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTFARLL 488
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
S A L+ GK +HA+ ++ G + + NA++ MY +CG + A F S N D
Sbjct: 489 SLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSI 548
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+WN +++ YA GQG A F +M
Sbjct: 549 SWNAVISAYALHGQGRKALILFEEM 573
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 219/421 (52%), Gaps = 13/421 (3%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
D+L NLVR G +H V K V +G + +SM+ + GDLG A V+
Sbjct: 190 DSLENLVR----------GEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSN 239
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+ +D+ N +I Y KAG ++A+ ++ + G++P+ YTF V+ C G D++
Sbjct: 240 LAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG-SGLEPNDYTFTNVISACNGDIDVEV 298
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
+ +H I+ G ++ V NA++++YVK G L A F GM +R+ +SW A++SGY +
Sbjct: 299 LRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVK 358
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG K L F + E+ V D ++++ + LG ++HG+V+K+G+ DVSV
Sbjct: 359 NGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSV 418
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
LI +Y VF + K++VS+ ++S Y G+ D A+ + +
Sbjct: 419 GTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADEED-AMALFSQLRLADI 477
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD +T A +LS A L G LH ++TG + + N +I MY+KC I A +
Sbjct: 478 KPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQ 537
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
+F+ + + ISW ++I L+ + +ALI F +M P+ +T++S+L AC+ G
Sbjct: 538 LFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGL 597
Query: 515 L 515
L
Sbjct: 598 L 598
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 204/398 (51%), Gaps = 10/398 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH + K + +GNA +S++VK G L A F M +R+L SW L+ GY K G
Sbjct: 302 LHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGN 361
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+AL + ++ +G V D F +L C +L G ++H V++ GY DV V
Sbjct: 362 GKKALEGFSQILELG-VGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGT 420
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
ALI +Y KC L ARLVF + ++ +S+NA++SGY E + LF +R + P
Sbjct: 421 ALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADE-EDAMALFSQLRLADIKP 479
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T + ++S S G+ +H Y+IK GF + SV N +I MY G+ + ++F
Sbjct: 480 DSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLF 539
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M D +SW +IS Y KA+ ++ M+ E +PDEITI SVL AC+ G L+
Sbjct: 540 YSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLE 599
Query: 417 LGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
G L + + + G+ I ++D+ + + +A+ ++ P + + W +++
Sbjct: 600 EGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHV 659
Query: 475 LRLN-NRSFEALIFFRKMMLNLKP---NSVTLVSILSA 508
+L+ + +F + K +L+L P S LVS L A
Sbjct: 660 CKLHGDLNFGQIA--SKHLLDLAPEEAGSYILVSNLYA 695
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 128/240 (53%), Gaps = 2/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ ++AL+ + EL + D L+ C + GL +H V K V +
Sbjct: 359 NGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSV 418
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + ++ K L A VF + D+++ S+N ++ GY A ++A++L+ ++ +
Sbjct: 419 GTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADE-EDAMALFSQL-RLAD 476
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD TF +L L +GK +H ++I+ G+EA+ V NA+ITMY KCG + A
Sbjct: 477 IKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDAC 536
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F M D ISWNA+IS Y +G+ K L+LF M++ PD +T+ SV+ A G
Sbjct: 537 QLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSG 596
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+P F ++ S GD LG+ +H ++ K+G+ +D N L+ +Y F + +
Sbjct: 75 NPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQS 134
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M ++ ++WTT+I + + + M G +E T + +L AC L N
Sbjct: 135 VFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLEN 194
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G ++H ++ G + + +LI MYS+C + A +V+ + K+V +I
Sbjct: 195 LVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISE 254
Query: 475 LRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+A+ +F + L+PN T +++SAC + + +H ++ G +
Sbjct: 255 YGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDE 314
Query: 534 GFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NA++ +YV+ G ++ A F ER++ +W LL+GY + G G A E F ++++
Sbjct: 315 ISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILE 374
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 264/518 (50%), Gaps = 9/518 (1%)
Query: 81 KYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
K +DS++ I + L L+ C G DEG LHS + K + L
Sbjct: 30 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 89
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
++ GDL A+ VF +M +R +F+WN +I A E L+ RM V P+ T
Sbjct: 90 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGT 148
Query: 200 FPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F VL C GG +++H ++ G V N LI +Y + G + AR VFDG+
Sbjct: 149 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 208
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+D SW AMISG +N + + LF M + + P SSV+SA + + ++G
Sbjct: 209 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 268
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG V+K+GFS D VCN L+ +Y GN E +FS M +D V++ T+I+
Sbjct: 269 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 328
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+KA+E ++ M +G PD T+AS++ AC+ G L G +LH + G S I
Sbjct: 329 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 388
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
L+++Y+KC I+ AL+ F + +NV+ W +++ L + + FR+M + + P
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-- 555
N T SIL C R+G L G++IH+ ++ + ++ + L+DMY + G++ AW+
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508
Query: 556 -QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+F +DV +W ++ GY + A FR+M+D
Sbjct: 509 IRFAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 544
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 268/534 (50%), Gaps = 5/534 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M L I A +++ C+ + G LH +V K + NA +
Sbjct: 231 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 290
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S++ G+L A ++F M RD ++N LI G ++ G+ ++A+ L++RM + G++PD
Sbjct: 291 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDS 349
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T ++ C L RG+++H + + G+ ++ + AL+ +Y KC D+ A F
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 409
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + WN M+ Y + +F M+ + P+ T S++ +GD +LG
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H +IK F + VC+ LI MY G + + R KDVVSWTTMI+ Y
Sbjct: 470 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 529
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA+ T++ M G DE+ + + +SACA L L G ++H A +G S +
Sbjct: 530 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 589
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLK 496
N L+ +YS+C I+++ F Q + I+W +++ G + + + EAL +F R +
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 649
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T S + A + + GK++HA + G + + NAL+ MY +CG + A Q
Sbjct: 650 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 709
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F + ++ +WN ++ Y++ G G+ A + F +MI S + N L+G+ C
Sbjct: 710 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 763
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 6/453 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N L G E+A++ M + D + L +LV C G LH+ +K
Sbjct: 318 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 377
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ A L+++ K D+ A F + ++ WNV++ Y G D+ +
Sbjct: 378 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNS 434
Query: 184 YQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ R + + P+ YT+P +L+TC + DL+ G+++H +I+ ++ + V + LI M
Sbjct: 435 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 494
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G L A + +D +SW MI+GY + K L F M + + D + L
Sbjct: 495 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 554
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ +SA + K G+++H GFS D+ N L+ +Y G EE F + E+
Sbjct: 555 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 614
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D ++W ++S ++ S ++A+ + M EG + T S + A + N+ G ++
Sbjct: 615 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 674
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H + +TG S + N LI MY+KC I A + F ++ KN +SW +II +
Sbjct: 675 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 734
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
EAL F +M+ N++PN VTLV +LSAC+ IG
Sbjct: 735 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 767
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 215/434 (49%), Gaps = 4/434 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L + + MQ I ++ ++++ C + G +HS + KT L+ + +
Sbjct: 431 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 490
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L AW + + +D+ SW +I GY + F D+AL+ +++M G++
Sbjct: 491 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRS 549
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D + C G+ LK G+++H G+ +D+ NAL+T+Y +CG + + L F
Sbjct: 550 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 609
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ D I+WNA++SG+ ++G + L +F+ M +D + T S + A+ + K
Sbjct: 610 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 669
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++VH + K G+ + VCN LI MY G+ + EK F + +K+ VSW +I+ Y
Sbjct: 670 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 729
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+A++++ M P+ +T+ VLSAC+ +G +D GI + GL
Sbjct: 730 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 789
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMML 493
++DM ++ + +A E ++P K + + W + +L + +++ E F +L
Sbjct: 790 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT-LLSACVVHKNMEIGEFAAHHLL 848
Query: 494 NLKPNSVTLVSILS 507
L+P +LS
Sbjct: 849 ELEPEDSATYVLLS 862
>gi|125587253|gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japonica Group]
Length = 583
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/500 (31%), Positives = 273/500 (54%), Gaps = 12/500 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+ +AL + +R C G D +H+V +++ L + N +S + +F ++ A VF
Sbjct: 49 NAEALASSLRDCG---GADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVF 105
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPD 212
+M +R + SW ++ Y K G + E + L+ M VG GV+ + TF C+L++CG D
Sbjct: 106 DEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDM--VGSGVQGNSLTFVCLLKSCGERCD 163
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
K G++VH +++ G+ ++V V +A+ Y +CGD+ A +FD M RD ISW MI+
Sbjct: 164 AKLGQQVHCCIVKGGW-SNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITA 222
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y ++G + L +F M P+ T+ SV+ A + G+++H V+K + +D
Sbjct: 223 YVQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKND 282
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + + L+ MY G + + VF M ++ ++WT+MIS Y S +KA+ ++ M+
Sbjct: 283 IHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKM 342
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+ +TI +LSAC L + LG +LH ++ + + I +TL+ Y KC
Sbjct: 343 RRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTY 402
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A + +PD++ ISWT++I G + EAL M+ + +KPN+ T S L ACA+
Sbjct: 403 AARILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAK 462
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ AL G++IH + + F+ ++L+DMY+RCG++ A + F++ E ++ W ++
Sbjct: 463 LEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVI 522
Query: 571 LTGYAERGQGALAEEFFRKM 590
+TG+A+ G L EE + M
Sbjct: 523 ITGFAQNG---LCEEALKYM 539
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 210/387 (54%), Gaps = 6/387 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + +A + + GD+ A +F KM RD+ SW +I Y + G +AL ++ M
Sbjct: 181 NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMV 240
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G +P+ +T VL+ C ++ GK++H V++ Y+ D+ + +AL+TMY +CG++
Sbjct: 241 -SEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEV 299
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVIS 306
A+ VFD MP+R+ I+W +MISGY ++G K ++LF + MR V V+ +T+ ++S
Sbjct: 300 FDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNN--LTIVGLLS 357
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + LG+E+H +IK +++ + + L+ Y G ++ M +D +S
Sbjct: 358 ACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAIS 417
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT +IS Y +A+++ M +G P+ T +S L ACA L L G K+H
Sbjct: 418 WTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVN 477
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+T S + + ++LIDMY +C +D+A VF +P+ N+++W II G N EAL
Sbjct: 478 KTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLCEEALK 537
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARI 512
+ M + + L ++L++C +
Sbjct: 538 YMYLMQQEGHEVDDFVLSTVLTSCGDL 564
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G QAL+ M +E + ++++ C ++ G LH V K M + +
Sbjct: 226 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 285
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF M R+ +W +I GYA++G ++A+ L+++M +
Sbjct: 286 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMK-MRR 344
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + GKE+H +I+ E ++ + + L+ Y KCG+ A
Sbjct: 345 VFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAA 404
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ISW A+ISGY G ++ L M V P+ T SS + A +
Sbjct: 405 RILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLE 464
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR++HG+V K +V V + LI MY+ G +E VF M ++V+W +I+
Sbjct: 465 ALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIIT 524
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ + L ++A++ +M+ EG D+ +++VL++C L
Sbjct: 525 GFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 564
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 6/206 (2%)
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
Q E S+P+ +AS L C G D ++H +A+R+ +AN LI Y++
Sbjct: 39 QEGRGESSLPNAEALASSLRDC---GGADGVRRVHAVAVRSLDSLGTFVANNLISAYARF 95
Query: 448 KCIDKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+ A EVF ++P+++V+SWT+++ + L+L + +FF + ++ NS+T V +L
Sbjct: 96 DEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLL 155
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVS 565
+C G+++H ++ G + + + +A+ Y +CG + A F+ RDV
Sbjct: 156 KSCGERCDAKLGQQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVI 214
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
+W ++T Y + G G A F +M+
Sbjct: 215 SWTTMITAYVQHGHGGQALRMFSEMV 240
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 248/456 (54%), Gaps = 6/456 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G EA LY +M W
Sbjct: 80 IGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTA 139
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P Y VL C +G+ +H V + + ++ V NALI +Y+ G A
Sbjct: 140 -VIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLA 198
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF M DR+++N +ISG+ + G L +F M+ + PD +T++S+++A V
Sbjct: 199 ERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASV 258
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G+++H Y++K G S D L+ +Y+ G+ E +F+ + +VV W M+
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y K+ E + M+A G P++ T +L C C G ++LG ++H L+++ G
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK +C+DKA ++ + ++V+SWTS+I G ++ EAL F++M
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S SACA I A+ G +IHA G A D + N L+++Y RCGR
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
+ A++ F + +D WN L++G+ GQ L E+
Sbjct: 499 EEAFSLFREIDHKDEITWNGLISGF---GQSRLYEQ 531
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 278/537 (51%), Gaps = 9/537 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A + M + L +++ C + + +G +H+ V K +GNA
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNAL 185
Query: 137 LSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+++++ FG A VF M CDR F N LI G+A+ G + AL ++ M + G++
Sbjct: 186 IALYLGFGSFKLAERVFCDMLFCDRVTF--NTLISGHAQCGHGECALQIFDEM-QLSGLR 242
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD T +L C V DL++GK++H ++++ G D +L+ +YVKCGD+ A +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + + + WN M+ Y + + K +F M+ + P+ T ++ G
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LG ++H IK GF D+ V LI MY + ++ K+ +E +DVVSWT+MI+ Y
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGY 422
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++A+ T++ M+ G PD I +AS SACA + + G+++H +G + I
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADI 482
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
I NTL+++Y++C ++A +F +I K+ I+W +I G + +AL+ F KM
Sbjct: 483 SIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQA 542
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
K N T +S +SA A + + GK++H A++ G + + NAL+ +Y +CG ++ A
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ + R+ +WN ++T ++ G+G A + F +M K N +G+ C
Sbjct: 603 KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 659
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 232/441 (52%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E AL+ D MQ + D + +L+ C +G LHS + K
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITE 283
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ Y + ++ ++ +M G+
Sbjct: 284 GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM-QATGI 342
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +T+PC+LRTC ++ G+++H I+ G+E+D+ V LI MY K L +AR
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK 402
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ + + KRD +SW +MI+GY ++ + L F M++ V PD + L+S SA +
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H V G++ D+S+ N L+ +Y G EE +F ++ KD ++W +IS
Sbjct: 463 MRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISG 522
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L ++A+ + M G+ + T S +SA A L ++ G ++H A++TG S
Sbjct: 523 FGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSE 582
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+AN LI +Y KC I+ A +F ++ +N +SW +II + R EAL F +M
Sbjct: 583 TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ 642
Query: 493 LNLKPNSVTLVSILSACARIG 513
LKPN VT + +L+AC+ +G
Sbjct: 643 EGLKPNDVTFIGVLAACSHVG 663
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 207/414 (50%), Gaps = 18/414 (4%)
Query: 200 FPCVLRTCGGVPDLKRGK------EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
C L+ C G RG E+H + G AD + N LI +Y K G + +AR
Sbjct: 45 LTCALQACRG-----RGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQ 99
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + RD +SW AM+SGY + G + L+ M V P LSSV+SA
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR +H V K F + V N LI +YL FG+ + E+VF M D V++ T+IS
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + A++ + M+ G PD +T+AS+L+ACA +G+L G +LH ++ G+
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNN--RSFEALIFFRK 490
I +L+D+Y KC I+ A ++F+ NV+ W +++ ++++ +SFE IF +
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE--IFGQM 337
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ PN T IL C G + G++IH+ +++ G D ++ L+DMY + +
Sbjct: 338 QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCL 397
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
A E RDV +W ++ GY + A F++M D G W +GL
Sbjct: 398 DKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC-GVWPDNIGL 450
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 253/465 (54%), Gaps = 9/465 (1%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A YVF + N ++ GY ++G + E L L+ M ++ D + L+ C
Sbjct: 83 ARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLM-RSRNLEVDSCSCTFALKACA 141
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
D + G E+ + G E + V +++I+ VK G + A+ VFDGMP +D + WN+
Sbjct: 142 SSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNS 201
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
+I GY + G + LF M + P +T++S+I A +G+ KLG+ +HGYV+ +G
Sbjct: 202 IIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLG 261
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETY 387
+D+ V + MY G+ E VF +M ++++VSW MIS C ++ + +
Sbjct: 262 LGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFH 321
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+++ + G D TI S+L C+ +L G LH A+R+ S +I++ ++D+YSKC
Sbjct: 322 RLVRSSGGF-DLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKC 379
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSIL 506
+ +A VF+++ D+NVI+WT++++GL N + +AL F +M + NSVT VS++
Sbjct: 380 GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLV 439
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDV 564
+CA +G+L G+ IH H R+G AFD AL+DMY +CG++ A F+ S +DV
Sbjct: 440 HSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
WN ++TGY G G A + KMI+ K N + L C
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSAC 544
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 234/442 (52%), Gaps = 6/442 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL-YLHSVVSKTMSHLSVR 131
+G + L+ M+ N+ VD + ++ C Y+ G+ + S V K M +
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEK-NRF 166
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G++ +S VKFG +G A VF M ++D+ WN +IGGY +AG FD A L+ M
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG-S 225
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+KP T +++ CGG+ +LK GK +H +V+ G D+ V+ + + MY K GD+ A
Sbjct: 226 GIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESA 285
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VF MP R+ +SWNAMISG NG + LF + D T+ S++
Sbjct: 286 RWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQT 345
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+ +HG I+ F ++ + ++ +Y G+ ++ VF+RM+ ++V++WT M+
Sbjct: 346 ASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAML 404
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + A+ + M+ EG + +T S++ +CA LG+L G +H R G
Sbjct: 405 VGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFA 464
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVF-HQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I+ L+DMY+KC I+ A +F H K+V+ W S+I G ++ ++A+ + K
Sbjct: 465 FDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHK 524
Query: 491 MM-LNLKPNSVTLVSILSACAR 511
M+ LKPN T +S+LSAC+
Sbjct: 525 MIEEGLKPNQTTFLSLLSACSH 546
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 7/378 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K H +I D V L+ Y L AR VFD + + NAM+ GY ++
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G Y + L LF +MR ++ D + + + A D ++G E+ ++ G + V
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ +I + FG E ++VF M +KDVV W ++I Y + D A + + M G
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P IT+ S++ AC +GNL LG +H + GL + I++ + +DMYSK I+ A V
Sbjct: 229 PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGAL 515
F+++P +N++SW ++I G N E+ F +++ + + T+VS+L C++ +L
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348
Query: 516 MCGKEIHAHALRIGVAFDG--FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
GK +H A+R +F+ L A++D+Y +CG +K A FN +R+V W +L
Sbjct: 349 ATGKILHGCAIR---SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405
Query: 573 GYAERGQGALAEEFFRKM 590
G A+ G A F +M
Sbjct: 406 GLAQNGHAEDALRLFAQM 423
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 265/516 (51%), Gaps = 9/516 (1%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+DS++ I + L L+ C G DEG LHS + K + L L ++
Sbjct: 55 IDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYL 114
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
GDL A VF +M +R +F+WN +I A + L+ RM V P+ TF
Sbjct: 115 FKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMV-NENVTPNEGTFS 173
Query: 202 CVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
VL C GG +++H +I G V N LI +Y + G + RAR VFDG+
Sbjct: 174 GVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYL 233
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+D SW AMISG +N ++ + LF M + + P SSV+SA + + ++G ++
Sbjct: 234 KDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 293
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG V+K+GFS D VCN L+ +Y G+ E +FS M +D V++ T+I+
Sbjct: 294 HGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 353
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+KA+E ++ M+ +G PD T+AS++ AC+ G L G +LH + G S I L
Sbjct: 354 EKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGAL 413
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNS 499
+++Y+KC I+ AL F + +NV+ W +++ L + + FR+M + + PN
Sbjct: 414 LNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 473
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN---Q 556
T SIL C R+G L G++IH+ ++ + ++ + L+DMY + G++ AW+ +
Sbjct: 474 YTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 533
Query: 557 FNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
F +DV +W ++ GY + A FR+M+D
Sbjct: 534 FAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 567
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 266/534 (49%), Gaps = 5/534 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M L I A +++ C+ + G LH +V K + NA +
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S++ G L A ++F M RD ++N LI G ++ G+ ++A+ L++RM + G++PD
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-QLDGLEPDS 372
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T ++ C L G+++H + + G+ ++ + AL+ +Y KC D+ A F
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLE 432
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + WN M+ Y + +F M+ + P+ T S++ +GD +LG
Sbjct: 433 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 492
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H +IK F + VC+ LI MY G + + R KDVVSWTTMI+ Y
Sbjct: 493 EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 552
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA+ T++ M G DE+ + + +SACA L L G ++H A +G S +
Sbjct: 553 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 612
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLK 496
N L+ +YSKC I++A F Q + I+W +++ G + + + EAL +F R +
Sbjct: 613 NALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGID 672
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T S + A + + GK++HA + G + + NA++ MY +CG + A Q
Sbjct: 673 SNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQ 732
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F + ++ +WN ++ Y++ G G+ A + F +MI S + N L+G+ C
Sbjct: 733 FLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 786
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 250/516 (48%), Gaps = 9/516 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N L G E+A++ MQ + D + L +LV C G LH+ +K
Sbjct: 341 NTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTK 400
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ A L+++ K D+ A F + ++ WNV++ Y G D+ +
Sbjct: 401 LGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLRNS 457
Query: 184 YQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ R + + P+ YT+P +L+TC + DL+ G+++H +I+ ++ + V + LI M
Sbjct: 458 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDM 517
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G L A + +D +SW MI+GY + K L F M + + D + L
Sbjct: 518 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 577
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ +SA + K G+++H GFS D+ N L+ +Y GN EE F + E+
Sbjct: 578 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA 637
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D ++W ++S ++ S ++A+ + M EG + T S + A + N+ G ++
Sbjct: 638 GDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQV 697
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H + +TG S + N +I MY+KC I A + F ++ KN +SW ++I +
Sbjct: 698 HAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFG 757
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNA 539
EAL F +M+ N++PN VTLV +LSAC+ IG + G E + G+A
Sbjct: 758 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVC 817
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
++DM R G + A + E D W LL+
Sbjct: 818 VVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSA 853
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 215/434 (49%), Gaps = 4/434 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L + + MQ I ++ ++++ C + G +HS + KT L+ + +
Sbjct: 454 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSV 513
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L AW + + +D+ SW +I GY + F D+AL+ +++M G++
Sbjct: 514 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRS 572
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D + C G+ LK G+++H G+ +D+ NAL+T+Y KCG++ A L F
Sbjct: 573 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF 632
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ D I+WNA++SG+ ++G + L +F M +D + T S + A+ + K
Sbjct: 633 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMK 692
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++VH + K G+ + VCN +I MY G+ + +K F + K+ VSW MI+ Y
Sbjct: 693 QGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYS 752
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+A++++ M P+ +T+ VLSAC+ +G +D GI+ + GL
Sbjct: 753 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKP 812
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++DM ++ + +A + ++P + + + W + +L + +++ E F +L
Sbjct: 813 EHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRT-LLSACVVHKNMEIGEFAAHHLL 871
Query: 494 NLKPNSVTLVSILS 507
L+P +LS
Sbjct: 872 ELEPEDSATYVLLS 885
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 278/539 (51%), Gaps = 13/539 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYDEGLYLHSVV 121
S++ + G ++QAL +Q L ++ +A+ + C LH ++
Sbjct: 10 TSKITDNARRGLVDQALSCF--LQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLI 67
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + + + +SM+ K + A ++F M +RD SWN +I GY++ G +EA
Sbjct: 68 LKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEAC 127
Query: 182 SLYQRMF-----WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
L+ M W V +T VL+ CGG+ + GK VH + ++ G+++D+ V
Sbjct: 128 GLFCSMINSCENWKLLVSD--FTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSG 185
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+ + MY KCG L A L FD + +D ++WN MI+GY +N + + LF M P
Sbjct: 186 STVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKP 245
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ T V+ AS + D +GR H V+K+G S DV V L+ MY F + E+ E+ F
Sbjct: 246 NDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAF 305
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M +++VS+ +I+ Y ++A+ Y +++EG PD T + S+C+ +
Sbjct: 306 GEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVA 365
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H +++ GL S + + N++++ YSKC D ALE F I N + W II G
Sbjct: 366 EGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFA 425
Query: 477 LNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N +AL+ F KM + K + + S++ A + A+ G+ +HAH ++ G+ +
Sbjct: 426 QNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIY 485
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ +A++DMY +CG ++ A F+ E++V +WN ++TGYA+ G A F++M S
Sbjct: 486 VGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSS 544
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 225/441 (51%), Gaps = 2/441 (0%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
++S + + V + L +++ C G +H K + + + + M+ K
Sbjct: 134 INSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCK 193
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A F ++ ++D+ +WN +I GYA+ + +EA+ L+ +M + G KP+ TF C
Sbjct: 194 CGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM-ELEGFKPNDTTFCC 252
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ + D G+ H V++ G DV V AL+ MY K D+ F M KR+
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRN 312
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+S+NA+I+GY G+Y + L ++ ++ ++PD T + S+ + G +VH
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ +K G DVSV N ++ Y G + + F + + V W +IS + + +K
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEK 432
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M DE + +SV+ A + ++ G LH M++GL I + + +ID
Sbjct: 433 ALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVID 492
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MYSKC ++ A +VF +P+KNV+SW S+I G N EAL+ F++M + + P +VT
Sbjct: 493 MYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVT 552
Query: 502 LVSILSACARIGALMCGKEIH 522
V IL AC+ G + G+ +
Sbjct: 553 FVGILFACSHAGLVEEGRNFY 573
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 169/311 (54%), Gaps = 1/311 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H+ V K + V + A + M+ KF D+ FG+M R+L S+N LI GY+
Sbjct: 266 GRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSL 325
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G ++EAL +Y ++ G++PD +TF + +C + G +VHVH ++FG ++DV
Sbjct: 326 MGKYEEALRVYSQL-QSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVS 384
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+++ Y KCG A F+ + + + + W +ISG+ +NGE K LM F MR+ +
Sbjct: 385 VGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFI 444
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D + SSVI A + GR +H +V+K G + V + +I MY G E+ +
Sbjct: 445 DKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQ 504
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVFS M K+VVSW +MI+ Y + +A+ +Q M + G +P +T +L AC+ G
Sbjct: 505 KVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAG 564
Query: 414 NLDLGIKLHQL 424
++ G + L
Sbjct: 565 LVEEGRNFYNL 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 178/362 (49%), Gaps = 14/362 (3%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M + + + W + I+ G + L F+ M ++P+ +T S+ ISA L
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+H ++K GFS+ + V + LI MY +E +F M +D VSW +MI+ Y
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 378 VLPDKAVETYQMM----EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
L ++A + M E + + T+A+VL AC LG +G +H A++ G S
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ ++ + + MY KC +D A F QI +K++++W ++I G N EA+ F +M L
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
KPN T +L A + G+ HA L++G + D F+ AL+DMY + ++
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR--KMIDSKG---NWRKLMGLFRK 606
F ++R++ ++N L+TGY+ G+ EE R + S+G + +GLF
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGK---YEEALRVYSQLQSEGMEPDSFTFVGLFSS 357
Query: 607 CQ 608
C
Sbjct: 358 CS 359
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 3/311 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G E+AL+ +Q + D V L C EG +H K
Sbjct: 317 NALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVK 376
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +GN+ ++ + K G A F + + W +I G+A+ G ++AL
Sbjct: 377 FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQ 436
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M K D ++ V++ +++G+ +H HV++ G + + V +A+I MY
Sbjct: 437 FCKMRKFID-KTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYS 495
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A+ VF MP+++ +SWN+MI+GY +NG + L+LF M + P +T
Sbjct: 496 KCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVG 555
Query: 304 VISASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEK-VFSRMES 361
++ A G + GR + ++ G + C ++ + G EE E + S S
Sbjct: 556 ILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFS 615
Query: 362 KDVVSWTTMIS 372
K+ W +++S
Sbjct: 616 KEPGIWGSLLS 626
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 265/500 (53%), Gaps = 38/500 (7%)
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------FFD 178
S+ S+ N L+ K G + A +F KM RD ++WN ++ GYA G F+
Sbjct: 111 SYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFN 170
Query: 179 ------------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
EA L++RM + G KP YT +LR C + ++
Sbjct: 171 GFSSRSSITWSSLISGYCRFGRQAEAFDLFKRM-RLEGQKPSQYTLGSILRGCSALGLIQ 229
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP--KRDRISWNAMISG 272
+G+ +H +V++ G+E++V VV L+ MY KC + A ++F G+ K + + W AM++G
Sbjct: 230 KGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTG 289
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y +NG+ K + F M V+ + T S+++A V G +VHG +++ GF +
Sbjct: 290 YAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCN 349
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V + L+ MY G+ ++V ME DVVSW +MI ++A+ ++ M A
Sbjct: 350 AYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHA 409
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
D T SVL+ C +G +D G +H L ++TG +Y +++N L+DMY+K + ++
Sbjct: 410 RNMKIDHYTFPSVLNCCI-VGRID-GKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNC 467
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A VF ++ +K+VISWTS++ G N E+L F M ++ + P+ + SILSACA
Sbjct: 468 AYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAE 527
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ L GK++H+ +++G+ + N+L+ MY +CG + A F S + RDV W L
Sbjct: 528 LTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTAL 587
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ GYA G+G + ++F++M
Sbjct: 588 IVGYARNGKGRDSLKYFQQM 607
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 226/429 (52%), Gaps = 7/429 (1%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
L +++R C +G +H V K +V + + M+ K + A +F +
Sbjct: 214 TLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGL 273
Query: 157 C--DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ W ++ GYA+ G +A+ ++ M GV+ + +TFP +L C V
Sbjct: 274 AFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMH-TEGVESNQFTFPSILTACSSVSAHC 332
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G++VH ++R G+ + V +AL+ MY KCGDL A+ V + M D +SWN+MI G
Sbjct: 333 FGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCV 392
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+G + ++LF M + D T SV++ +VG G+ VH VIK GF +
Sbjct: 393 RHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC-IVGRID-GKSVHCLVIKTGFENYKL 450
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L+ MY + VF +M KDV+SWT++++ Y + +++++T+ M G
Sbjct: 451 VSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISG 510
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD+ +AS+LSACA L L+ G ++H ++ GL S + + N+L+ MY+KC C+D A
Sbjct: 511 VSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDAD 570
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARI 512
+F + ++VI+WT++I+G N + ++L +F++M + ++P ++ R+
Sbjct: 571 AIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRL 630
Query: 513 GALMCGKEI 521
G L KEI
Sbjct: 631 GKLDEAKEI 639
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 187/397 (47%), Gaps = 38/397 (9%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
++V +H I Y++ + N L+ K G + AR +FD M +RD +WN M+SGY
Sbjct: 101 QQVVMHNIADSYQS-IFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANV 159
Query: 277 G------EYMKGLM-------------------------LFIMMREVLVDPDFMTLSSVI 305
G E G LF MR P TL S++
Sbjct: 160 GRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSIL 219
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKD 363
+G + G +HGYV+K GF +V V L+ MY + E E +F + +
Sbjct: 220 RGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGN 279
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V WT M++ Y + KA+E ++ M EG ++ T S+L+AC+ + G ++H
Sbjct: 280 HVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHG 339
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R G + + L+DMY+KC + A V + D +V+SW S+I+G + E
Sbjct: 340 CIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEE 399
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A++ F+KM N+K + T S+L+ C I + GK +H ++ G + NAL+D
Sbjct: 400 AILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVIKTGFENYKLVSNALVD 457
Query: 543 MYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERG 578
MY + + A+ F E+DV +W L+TGY + G
Sbjct: 458 MYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNG 494
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 263/497 (52%), Gaps = 13/497 (2%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLF 162
C + +G LH+ + KT S S+ + N FL+++ K L HA +F + D +D
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 163 SWNVLIGGYAKAGFFDE---ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
SWN LI +++ A+SL++RM V P+ +T V + D+ GK+
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H ++ G DV V ++L+ MY K G + AR +FD MP+R+ +SW MISGY +
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 280 MKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVC 336
K + +F +M RE + +F L+SV+SA L D + GR+VH IK G VSV
Sbjct: 201 DKAVEVFELMRREEEIQNEF-ALTSVLSA--LTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY G+ ++ + F K+ ++W+ M++ Y DKA++ + M + G +
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P E T+ V++AC+ L + G ++H A + G + + + ++DMY+KC + A +
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGAL 515
F + +V+ WTSII G N L + KM M + PN +T+ S+L AC+ + AL
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGY 574
GK++HA ++ G + + +AL MY +CG + + F RDV +WN +++G
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497
Query: 575 AERGQGALAEEFFRKMI 591
++ G G A E F KM+
Sbjct: 498 SQNGHGNKALELFEKML 514
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 243/468 (51%), Gaps = 17/468 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G HSV KT V +G++ L+M+ K G + A +F +M +R+ SW +I GYA
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ D+A+ +++ M ++ + + VL + G++VH I+ G A V
Sbjct: 197 SDIADKAVEVFELMRREEEIQNE-FALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVS 255
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+TMY KCG L A F+ ++ I+W+AM++GY + G+ K L LF M
Sbjct: 256 VANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSG 315
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P TL VI+A + G+++H + K+GF + V + ++ MY G+ +
Sbjct: 316 VLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADAR 375
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K F ++ DVV WT++I+ Y + + + Y M+ E +P+E+T+ASVL AC+ L
Sbjct: 376 KGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLA 435
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD G ++H ++ G + I + L MY+KC +D +F ++P ++VISW ++I
Sbjct: 436 ALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMIS 495
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
GL N +AL F KM+L +KP+ VT V++LSAC+ +G + G E + F
Sbjct: 496 GLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEY------FKMMF 549
Query: 533 DGFLPNALLDMYV-------RCGRMKPAWNQFNSNERD--VSAWNILL 571
D F +++ Y R G++ A S D + W ILL
Sbjct: 550 DEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILL 597
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 215/402 (53%), Gaps = 3/402 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS+ K V + NA ++M+ K G L A F D++ +W+ ++ GYA+
Sbjct: 238 GRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQ 297
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G D+AL L+ +M GV P +T V+ C + + GK++H + G+ +
Sbjct: 298 GGDSDKALKLFNKMH-SSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLY 356
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V++A++ MY KCG L AR F+ + + D + W ++I+GY +NG+Y GL L+ M+
Sbjct: 357 VLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER 416
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ +T++SV+ A + G+++H +IK GF +V + + L MY G+ ++G
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F RM S+DV+SW MIS + +KA+E ++ M EG PD +T ++LSAC+ +G
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+D G + ++ I+ ++ ++D+ S+ +++A E + + I+
Sbjct: 537 LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRIL 596
Query: 473 LGLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIG 513
LG N+R++E ++ + ++ L P S V + S +G
Sbjct: 597 LGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALG 638
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 138/270 (51%), Gaps = 7/270 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ALK + M + E LV ++ C EG +HS K L + +
Sbjct: 299 GDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVL 358
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + M+ K G L A F + D+ W +I GY + G ++ L+LY +M + V
Sbjct: 359 SAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKM-QMERV 417
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T VLR C + L +GK++H +I++G++ +V + +AL MY KCG L L
Sbjct: 418 IPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYL 477
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F MP RD ISWNAMISG +NG K L LF M + PD +T +++SA +G
Sbjct: 478 IFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGL 537
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
G E KM F D+ ++ P+++ Y
Sbjct: 538 VDRGWE----YFKMMF-DEFNIA-PMVEHY 561
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 147/285 (51%), Gaps = 8/285 (2%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCY 374
GR +H ++K G + V N + +Y + +F + KD VSW ++I+ +
Sbjct: 30 GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89
Query: 375 EGSVLPDK---AVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ A+ ++ MM A +P+ T+A V SA + L ++ G + H +A++TG
Sbjct: 90 SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGC 149
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++L++MY K + A ++F ++P++N +SW ++I G ++ + +A+ F
Sbjct: 150 SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFEL 209
Query: 491 MMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + N L S+LSA + G+++H+ A++ G+ + NAL+ MY +CG
Sbjct: 210 MRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGS 269
Query: 550 MKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A F S +++ W+ ++TGYA+ G A + F KM S
Sbjct: 270 LDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSS 314
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P + L C N+ G LH ++TG IS I + NT +++Y+K + AL +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 457 FHQI--PDKNVISWTSIILGLRLNNRSFE---ALIFFRKMML--NLKPNSVTLVSILSAC 509
F I DK+ +SW S+I N+ S A+ FR+MM N+ PN+ TL + SA
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + ++ GK+ H+ A++ G + D ++ ++LL+MY + G + A F+ ER+ +W
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
+++GYA A E F M
Sbjct: 189 TMISGYASSDIADKAVEVFELM 210
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E L MQ + +E + +++R C D+G +H+ + K L V +
Sbjct: 399 NGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPI 458
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A +M+ K G L + +F +M RD+ SWN +I G ++ G ++AL L+++M + G
Sbjct: 459 GSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKML-LEG 517
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE 218
+KPD TF +L C + + RG E
Sbjct: 518 IKPDPVTFVNLLSACSHMGLVDRGWE 543
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 268/545 (49%), Gaps = 10/545 (1%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG LE+AL+ M+ + + +A +V LC GL + S V +
Sbjct: 120 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 179
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ ++MF G + A +F +M + D SWN +I Y+ G + ++ M
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++PD T ++ C G +H +R ++ V V+NAL+ MY G L
Sbjct: 240 -HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +RD ISWN MIS Y +N L + P+ +T SS + A
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G G+ VH V+++ ++ V N LI MY + E+ EKVF M + D+VS+
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNV 418
Query: 370 MISCYEGSVLPD--KAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAM 426
+I Y +VL D KA++ + M + G P+ IT+ ++ + A +L + G LH +
Sbjct: 419 LIGGY--AVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII 476
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
RTG +S +AN+LI MY+KC ++ + +F+ I +KN++SW +II EAL
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALK 536
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F M K + V L LS+CA + +L G ++H ++ G+ D ++ NA +DMY
Sbjct: 537 LFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYG 596
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMG 602
+CG+M R WN L++GYA+ G AEE F++M+ + K ++ +
Sbjct: 597 KCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVA 656
Query: 603 LFRKC 607
L C
Sbjct: 657 LLSAC 661
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 270/529 (51%), Gaps = 12/529 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY----LHSVVSKTMSHLSVRLGN 134
A + L M+E + + AL +LV CE +RG DEG+ +H++ + +V +G
Sbjct: 25 AFEMLRGMRERGVPLSGFALASLVTACE-RRGRDEGIACGAAIHALTHRAGLMGNVYIGT 83
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L ++ G + A +F +M +R++ SW L+ + G+ +EAL Y++M GV
Sbjct: 84 ALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR-RDGVP 142
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
+ F V+ CG + + G +V VI G + V V N+LITM+ G + A +
Sbjct: 143 CNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKL 202
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M + D ISWNAMIS Y G K ++F MR + PD TL S++S
Sbjct: 203 FDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHF 262
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G +H ++ V+V N L+ MY + G + E +F M +D++SW TMIS Y
Sbjct: 263 SHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSY 322
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A++T + P+ +T +S L AC+ G L G +H + ++ L +
Sbjct: 323 VQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 382
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
++ N+LI MY KC ++ A +VF +P +++S+ +I G + +A+ F M
Sbjct: 383 LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA 442
Query: 494 NLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KPN +T+++I + A L G+ +HA+ +R G D ++ N+L+ MY +CG ++
Sbjct: 443 GIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 502
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL 600
+ N FNS +++ +WN ++ + G G EE + ID + KL
Sbjct: 503 STNIFNSITNKNIVSWNAIIAANVQLGHG---EEALKLFIDMQHAGNKL 548
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 238/466 (51%), Gaps = 10/466 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L +L+ +C + G +HS+ ++ SV + NA ++M+ G L A ++F
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RDL SWN +I Y + +AL ++F P+ TF L C L
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHT-NESPNHLTFSSALGACSSPGAL 363
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
GK VH V++ + ++ V N+LITMY KC + A VF MP D +S+N +I GY
Sbjct: 364 IDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGY 423
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDD 332
+ K + +F MR + P+++T+ ++ + D GR +H Y+I+ GF D
Sbjct: 424 AVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSD 483
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N LI MY GN E +F+ + +K++VSW +I+ ++A++ + M+
Sbjct: 484 EYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH 543
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G+ D + +A LS+CA L +L+ G++LH L M++GL S + N +DMY KC +D+
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 603
Query: 453 ALEVFHQIPDKNVIS---WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
L+V +PD+ + W ++I G EA F++M+ KP+ VT V++LSA
Sbjct: 604 MLQV---VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSA 660
Query: 509 CARIGALMCGKEIH-AHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
C+ G + G + + + A GV+ ++D+ R GR A
Sbjct: 661 CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEA 706
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 209/439 (47%), Gaps = 9/439 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N + ALK L + N + + + C +G +H++V +
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GN+ ++M+ K + A VF M D+ S+NVLIGGYA ++
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA---VLEDGTKA 432
Query: 184 YQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALIT 240
Q W+ G+KP+ T + + DL G+ +H ++IR G+ +D V N+LIT
Sbjct: 433 MQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLIT 492
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG+L + +F+ + ++ +SWNA+I+ + G + L LFI M+ D +
Sbjct: 493 MYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVC 552
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L+ +S+ + + G ++HG +K G D V N + MY G +E +V
Sbjct: 553 LAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQA 612
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ W T+IS Y +A ET++ M A G PD +T ++LSAC+ G +D GI
Sbjct: 613 IRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGID 672
Query: 421 LHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLN 478
+ +A G+ I ++D+ + +A + ++P N + W S++ R
Sbjct: 673 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR-T 731
Query: 479 NRSFEALIFFRKMMLNLKP 497
+++ E K +L L P
Sbjct: 732 HKNLEIGRKTAKKLLELDP 750
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 157/324 (48%), Gaps = 5/324 (1%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG-DEKL 316
M R +W +SG G + MRE V L+S+++A E G DE +
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 317 --GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G +H + G +V + L+ +Y S G + +++F M ++VVSWT ++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++A+ Y+ M +G + A+V+S C L N G+++ + +GL + +
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+AN+LI M+ + A ++F ++ + + ISW ++I + + F M +
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
L+P++ TL S++S CA G IH+ LR + + NAL++MY G++ A
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 554 WNQF-NSNERDVSAWNILLTGYAE 576
F N + RD+ +WN +++ Y +
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQ 324
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 268/545 (49%), Gaps = 10/545 (1%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG LE+AL+ M+ + + +A +V LC GL + S V +
Sbjct: 422 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 481
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ ++MF G + A +F +M + D SWN +I Y+ G + ++ M
Sbjct: 482 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 541
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++PD T ++ C G +H +R ++ V V+NAL+ MY G L
Sbjct: 542 -HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 600
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +RD ISWN MIS Y +N L + P+ +T SS + A
Sbjct: 601 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 660
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G G+ VH V+++ ++ V N LI MY + E+ EKVF M + D+VS+
Sbjct: 661 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNV 720
Query: 370 MISCYEGSVLPD--KAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAM 426
+I Y +VL D KA++ + M + G P+ IT+ ++ + A +L + G LH +
Sbjct: 721 LIGGY--AVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYII 778
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
RTG +S +AN+LI MY+KC ++ + +F+ I +KN++SW +II EAL
Sbjct: 779 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALK 838
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F M K + V L LS+CA + +L G ++H ++ G+ D ++ NA +DMY
Sbjct: 839 LFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYG 898
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMG 602
+CG+M R WN L++GYA+ G AEE F++M+ + K ++ +
Sbjct: 899 KCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVA 958
Query: 603 LFRKC 607
L C
Sbjct: 959 LLSAC 963
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/534 (30%), Positives = 273/534 (51%), Gaps = 12/534 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY----LHSVVSKTMSHLS 129
GS +A + L M+E + + AL +LV CE +RG DEG+ +H++ + +
Sbjct: 322 GSHGKAFEMLRGMREPGVPLSGFALASLVTACE-RRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G A L ++ G + A +F +M +R++ SW L+ + G+ +EAL Y++M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQM-R 439
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV + F V+ CG + + G +V VI G + V V N+LITM+ G +
Sbjct: 440 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +FD M + D ISWNAMIS Y G K ++F MR + PD TL S++S
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G +H ++ V+V N L+ MY + G + E +F M +D++SW T
Sbjct: 560 SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 619
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y + A++T + P+ +T +S L AC+ G L G +H + ++
Sbjct: 620 MISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLS 679
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L +++ N+LI MY KC ++ A +VF +P +++S+ +I G + +A+ F
Sbjct: 680 LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFS 739
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M +KPN +T+++I + A L G+ +HA+ +R G D ++ N+L+ MY +C
Sbjct: 740 WMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKC 799
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL 600
G ++ + N FNS +++ +WN ++ + G G EE + ID + KL
Sbjct: 800 GNLESSTNIFNSITNKNIVSWNAIIAANVQLGHG---EEALKLFIDMQHAGNKL 850
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 224/433 (51%), Gaps = 9/433 (2%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+ + D L +L+ +C + G +HS+ ++ SV + NA ++M+ G
Sbjct: 539 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 598
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A ++F M RDL SWN +I Y + +AL ++F P+ TF L
Sbjct: 599 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHT-NESPNHLTFSSALG 657
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C L GK VH V++ + ++ V N+LITMY KC + A VF MP D +S
Sbjct: 658 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 717
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVHGYV 324
+N +I GY + K + +F MR + P+++T+ ++ + D GR +H Y+
Sbjct: 718 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYI 777
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
I+ GF D V N LI MY GN E +F+ + +K++VSW +I+ ++A+
Sbjct: 778 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEAL 837
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ + M+ G+ D + +A LS+CA L +L+ G++LH L M++GL S + N +DMY
Sbjct: 838 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 897
Query: 445 SKCKCIDKALEVFHQIPDKNVIS---WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
KC +D+ L+V +PD+ + W ++I G EA F++M+ KP+ V
Sbjct: 898 GKCGKMDEMLQV---VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYV 954
Query: 501 TLVSILSACARIG 513
T V++LSAC+ G
Sbjct: 955 TFVALLSACSHAG 967
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 209/439 (47%), Gaps = 9/439 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N + ALK L + N + + + C +G +H++V +
Sbjct: 618 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 677
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GN+ ++M+ K + A VF M D+ S+NVLIGGYA ++
Sbjct: 678 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA---VLEDGTKA 734
Query: 184 YQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALIT 240
Q W+ G+KP+ T + + DL G+ +H ++IR G+ +D V N+LIT
Sbjct: 735 MQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLIT 794
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG+L + +F+ + ++ +SWNA+I+ + G + L LFI M+ D +
Sbjct: 795 MYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVC 854
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L+ +S+ + + G ++HG +K G D V N + MY G +E +V
Sbjct: 855 LAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQA 914
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ W T+IS Y +A ET++ M A G PD +T ++LSAC+ G +D GI
Sbjct: 915 IRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGID 974
Query: 421 LHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLN 478
+ +A G+ I ++D+ + +A + ++P N + W S++ R
Sbjct: 975 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR-T 1033
Query: 479 NRSFEALIFFRKMMLNLKP 497
+++ E K +L L P
Sbjct: 1034 HKNLEIGRKTAKKLLELDP 1052
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 173/366 (47%), Gaps = 8/366 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL---VFDGMPKRDRISWNAMISGYFE 275
+H +R N L+ Y + D A +FD M R +W +SG
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG-DEKL--GREVHGYVIKMGFSDD 332
G + K + MRE V L+S+++A E G DE + G +H + G +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V + L+ +Y S G + +++F M ++VVSWT ++ + ++A+ Y+ M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G + A+V+S C L N G+++ + +GL + + +AN+LI M+ +
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A ++F ++ + + ISW ++I + + F M + L+P++ TL S++S CA
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNIL 570
G IH+ LR + + NAL++MY G++ A F N + RD+ +WN +
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620
Query: 571 LTGYAE 576
++ Y +
Sbjct: 621 ISSYVQ 626
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRL 477
+H LA+R L NTL+ Y + + AL +F ++ D+ +W + + G
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG---ALMCGKEIHAHALRIGVAFD 533
R A R M P + L S+++AC R G + CG IHA R G+ +
Sbjct: 98 CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157
Query: 534 GFLPNALLDM 543
++ ALL +
Sbjct: 158 VYIGRALLHL 167
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 264/518 (50%), Gaps = 9/518 (1%)
Query: 81 KYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
K +DS++ I + L L+ C G DEG LHS + K + L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
++ GDL A+ VF +M +R +F+WN +I A E L+ RM V P+ T
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGT 188
Query: 200 FPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F VL C GG +++H ++ G V N LI +Y + G + AR VFDG+
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+D SW AMISG +N + + LF M + + P SSV+SA + + ++G
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG V+K+GFS D VCN L+ +Y GN E +FS M +D V++ T+I+
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+KA+E ++ M +G PD T+AS++ AC+ G L G +LH + G S I
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
L+++Y+KC I+ AL+ F + +NV+ W +++ L + + FR+M + + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-- 555
N T SIL C R+G L G++IH+ ++ + ++ + L+DMY + G++ AW+
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 556 -QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+F +DV +W ++ GY + A FR+M+D
Sbjct: 549 IRFAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 268/534 (50%), Gaps = 5/534 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M L I A +++ C+ + G LH +V K + NA +
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S++ G+L A ++F M RD ++N LI G ++ G+ ++A+ L++RM + G++PD
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDS 389
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T ++ C L RG+++H + + G+ ++ + AL+ +Y KC D+ A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + WN M+ Y + +F M+ + P+ T S++ +GD +LG
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H +IK F + VC+ LI MY G + + R KDVVSWTTMI+ Y
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA+ T++ M G DE+ + + +SACA L L G ++H A +G S +
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLK 496
N L+ +YS+C I+++ F Q + I+W +++ G + + + EAL +F R +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T S + A + + GK++HA + G + + NAL+ MY +CG + A Q
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F + ++ +WN ++ Y++ G G+ A + F +MI S + N L+G+ C
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 6/453 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N L G E+A++ M + D + L +LV C G LH+ +K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ A L+++ K D+ A F + ++ WNV++ Y G D+ +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNS 474
Query: 184 YQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ R + + P+ YT+P +L+TC + DL+ G+++H +I+ ++ + V + LI M
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 534
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G L A + +D +SW MI+GY + K L F M + + D + L
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ +SA + K G+++H GFS D+ N L+ +Y G EE F + E+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D ++W ++S ++ S ++A+ + M EG + T S + A + N+ G ++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H + +TG S + N LI MY+KC I A + F ++ KN +SW +II +
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
EAL F +M+ N++PN VTLV +LSAC+ IG
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 215/434 (49%), Gaps = 4/434 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L + + MQ I ++ ++++ C + G +HS + KT L+ + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L AW + + +D+ SW +I GY + F D+AL+ +++M G++
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRS 589
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D + C G+ LK G+++H G+ +D+ NAL+T+Y +CG + + L F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ D I+WNA++SG+ ++G + L +F+ M +D + T S + A+ + K
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++VH + K G+ + VCN LI MY G+ + EK F + +K+ VSW +I+ Y
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+A++++ M P+ +T+ VLSAC+ +G +D GI + GL
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMML 493
++DM ++ + +A E ++P K + + W + +L + +++ E F +L
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT-LLSACVVHKNMEIGEFAAHHLL 888
Query: 494 NLKPNSVTLVSILS 507
L+P +LS
Sbjct: 889 ELEPEDSATYVLLS 902
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 281/544 (51%), Gaps = 5/544 (0%)
Query: 51 NTQNTSSIATKNPNS-RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
N S + N +S L + + ++ ++ M+E + + + L+ C
Sbjct: 13 NVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSG 72
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
E + LH +SK+ L ++ + + + GD A VF + +R +FSWN +I
Sbjct: 73 SLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIH 132
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC-GGVPDLKRGKEVHVHVIRFGY 228
+ + L++RM G+ P+ YTF VL+ C GG K+VH +G+
Sbjct: 133 VFVAQKSNFQVFCLFRRML-AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
++ V N LI +Y K G + A+ VF+ + +D ++W AMISG +NG + ++LF
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M + P LSSV+SAS + +LG ++H VIK GF + VCN L+ +Y
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E++FS M S+D VS+ ++IS D+A+E + M+ + PD IT+AS+LSA
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
CA +G L G++LH A++ G+ + II+ +L+D+YSKC ++ A + F +N++ W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431
Query: 469 TSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+++ +L+N S IF + M + PN T SIL C +GAL G++IH H ++
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
G + ++ + L+DMY + G++ A E DV +W ++ GY + + A +
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 587 FRKM 590
F +M
Sbjct: 552 FEEM 555
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 263/523 (50%), Gaps = 3/523 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG E+A+ M I L +++ + ++ G LH +V K H
Sbjct: 236 LSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N ++++ + L A +F M RD S+N LI G + GF D AL L+ +M
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM-Q 354
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+KPD T +L C V L +G ++H H I+ G AD+ + +L+ +Y KC D+
Sbjct: 355 RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A F + + WN M+ Y + +F M+ + P+ T S++
Sbjct: 415 TAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG ++H +VIK GF +V VC+ LI MY +G ++ R+ DVVSWT
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y + +A++ ++ ME G D I AS +SACA + L G ++H + G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFF 488
+ + I N LI +Y++C I +A F +I DKN ISW S++ GL + EAL +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
R + + N T S +SA A + + G++IH+ L+ G + + N+L+ +Y + G
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AW +FN +ER+V +WN ++TGY++ G G A F +M
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 239/459 (52%), Gaps = 8/459 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G ++AL+ MQ + D + +L+ C +G+ LHS K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L + L ++ K D+ A F ++ WNV++ Y + ++ +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G+ P+ +T+P +LRTC + L G+++H HVI+ G++ +V V + LI MY
Sbjct: 451 FRQM-QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A + +P+ D +SW AMI+GY ++ + + L LF M + D + +S
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + + G+++H GF D+S+ N LI +Y G +E F ++ K+
Sbjct: 570 AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMM---EAEGSMPDEITIASVLSACACLGNLDLGIK 420
+SW +++S S ++A++ + M EAE +M T S +SA A L N+ G +
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNM---FTYGSAISAAASLANIKQGQQ 686
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H + ++TG S ++N+LI +Y+K I A F+ + ++NVISW ++I G +
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
EAL F +M + + PN VT V +LSAC+ IG + G
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 258/498 (51%), Gaps = 8/498 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
L S + K+ V +G + ++K G++ +A VF + ++ +W +I G K G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L L+ ++ V PD Y VL C +P L+ GK++H H++R+G E D ++N
Sbjct: 230 SYVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI YVKCG ++ A +F+GMP ++ ISW ++SGY +N + + + LF M + + P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D SS++++ + G +VH Y IK +D V N LI MY + KVF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 357 SRMESKDVVSWTTMISCYE--GSVLP-DKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ DVV + MI Y G+ +A+ ++ M P +T S+L A A L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L L ++H L + GL I + LID+YS C C+ + VF ++ K+++ W S+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 474 GLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G + + EAL F ++ L+ +P+ T ++++A + ++ G+E H L+ G+
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++ NALLDMY +CG + A F+S RDV WN +++ YA G+G A + KM+
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 592 DS--KGNWRKLMGLFRKC 607
+ N+ +G+ C
Sbjct: 649 SEGIEPNYITFVGVLSAC 666
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 264/495 (53%), Gaps = 15/495 (3%)
Query: 109 RGYDEGLYLHSVVSKTMS----HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
R D+ L+ +VV + L L N ++++ + G + +A VF KM +R+L SW
Sbjct: 54 RASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSW 113
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK----EVH 220
+ ++ G ++E+L ++ + P+ Y ++ C G+ RG+ ++
Sbjct: 114 STMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQ 171
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ G++ DV V LI Y+K G++ ARLVFD +P++ ++W MISG + G
Sbjct: 172 SFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L LF + E V PD LS+V+SA ++ + G+++H ++++ G D S+ N LI
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y+ G K+F+ M +K+++SWTT++S Y+ + L +A+E + M G PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+S+L++CA L L G ++H ++ L + + N+LIDMY+KC C+ A +VF
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 461 PDKNVISWTSIILGL-RLNNR--SFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALM 516
+V+ + ++I G RL + EAL FR M L +P+ +T VS+L A A + +L
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K+IH + G+ D F +AL+D+Y C +K + F+ + +D+ WN + GY
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 576 ERGQGALAEEFFRKM 590
++ + A F ++
Sbjct: 532 QQSENEEALNLFLEL 546
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 246/513 (47%), Gaps = 7/513 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ + E N+ D L ++ C + G +H+ + + + L N +
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+VK G + A +F M ++++ SW L+ GY + EA+ L+ M G +KPD+Y
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMY 351
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L +C + L G +VH + I+ D V N+LI MY KC L AR VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 259 PKRDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + +NAMI GY G E + L +F MR L+ P +T S++ AS +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +++HG + K G + D+ + LI +Y + ++ VF M+ KD+V W +M + Y
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++A+ + ++ PDE T A++++A L ++ LG + H ++ GL
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I N L+DMY+KC + A + F ++V+ W S+I + +AL KMM
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++PN +T V +LSAC+ G + G + LR G+ + ++ + R GR+ A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 555 NQFNSNERDVSA--WNILLTGYAERGQGALAEE 585
+A W LL+G A+ G LAE
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEH 744
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 203/406 (50%), Gaps = 5/406 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++A++ SM + + D A +++ C G +H+ K +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF---FDEALSLYQRMFW 189
N+ + M+ K L A VF D+ +N +I GY++ G EAL++++ M +
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P + TF +LR + L K++H + ++G D+ +ALI +Y C L
Sbjct: 448 -RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+RLVFD M +D + WN+M +GY + E + L LF+ ++ PD T +++++A+
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ +LG+E H ++K G + + N L+ MY G+ E+ K F S+DVV W +
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y KA++ + M +EG P+ IT VLSAC+ G ++ G+K +L +R G
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFG 686
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
+ ++ + + ++KA E+ ++P K I W S++ G
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 35/310 (11%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H ++ K +L + G+A + ++ L + VF +M +DL WN + GY +
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSE 535
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EAL+L+ + + +PD +TF ++ G + ++ G+E H +++ G E + + N
Sbjct: 536 NEEALNLFLEL-QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG A FD RD + WN++IS Y +GE K L + M ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+++T V+SA H +++ G ++ L FG E E
Sbjct: 655 NYITFVGVLSACS-----------HAGLVEDGLKQ--------FELMLRFGIEPETEH-- 693
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ M+S + +KA E ++E + P I S+LS CA GN++
Sbjct: 694 ----------YVCMVSLLGRAGRLNKARE---LIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 417 LGIKLHQLAM 426
L ++A+
Sbjct: 741 LAEHAAEMAI 750
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 281/544 (51%), Gaps = 5/544 (0%)
Query: 51 NTQNTSSIATKNPNS-RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
N S + N +S L + + ++ ++ M+E + + + L+ C
Sbjct: 13 NVVRVSGVGATNSHSFDQTTLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSG 72
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
E + LH +SK+ L ++ + + + GD A VF + +R +FSWN +I
Sbjct: 73 SLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIH 132
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC-GGVPDLKRGKEVHVHVIRFGY 228
+ + L++RM G+ P+ YTF VL+ C GG K+VH +G+
Sbjct: 133 VFVAQKSNFQVFCLFRRML-AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGF 191
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
++ V N LI +Y K G + A+ VF+ + +D ++W AMISG +NG + ++LF
Sbjct: 192 DSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCD 251
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M + P LSSV+SAS + +LG ++H VIK GF + VCN L+ +Y
Sbjct: 252 MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E++FS M S+D VS+ ++IS D+A+E + M+ + PD IT+AS+LSA
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
CA +G L G++LH A++ G+ + II+ +L+D+YSKC ++ A + F +N++ W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431
Query: 469 TSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+++ +L+N S IF + M + PN T SIL C +GAL G++IH H ++
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
G + ++ + L+DMY + G++ A E DV +W ++ GY + + A +
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 587 FRKM 590
F +M
Sbjct: 552 FEEM 555
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 263/523 (50%), Gaps = 3/523 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG E+A+ M I L +++ + ++ G LH +V K H
Sbjct: 236 LSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N ++++ + L A +F M RD S+N LI G + GF D AL L+ +M
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM-Q 354
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+KPD T +L C V L +G ++H H I+ G AD+ + +L+ +Y KC D+
Sbjct: 355 RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A F + + WN M+ Y + +F M+ + P+ T S++
Sbjct: 415 TAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G LG ++H +VIK GF +V VC+ LI MY +G ++ R+ DVVSWT
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y + +A++ ++ ME G D I AS +SACA + L G ++H + G
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFF 488
+ + I N LI +Y++C I +A F +I DKN ISW S++ GL + EAL +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
R + + N T S +SA A + + G++IH+ L+ G + + N+L+ +Y + G
Sbjct: 655 RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AW +FN +ER+V +WN ++TGY++ G G A F +M
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 239/459 (52%), Gaps = 8/459 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G ++AL+ MQ + D + +L+ C +G+ LHS K
Sbjct: 331 NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L + L ++ K D+ A F ++ WNV++ Y + ++ +
Sbjct: 391 AGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G+ P+ +T+P +LRTC + L G+++H HVI+ G++ +V V + LI MY
Sbjct: 451 FRQM-QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A + +P+ D +SW AMI+GY ++ + + L LF M + D + +S
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + + G+++H GF D+S+ N LI +Y G +E F ++ K+
Sbjct: 570 AISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKN 629
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMM---EAEGSMPDEITIASVLSACACLGNLDLGIK 420
+SW +++S S ++A++ + M EAE +M T S +SA A L N+ G +
Sbjct: 630 NISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNM---FTYGSAISAAASLANIKQGQQ 686
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H + ++TG S ++N+LI +Y+K I A F+ + ++NVISW ++I G +
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
EAL F +M + + PN VT V +LSAC+ IG + G
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 241/461 (52%), Gaps = 6/461 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L VK G L +A +F KM RD SW +I GY EALSL+ +M+ G+
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D + L+ CG + G+ +H + ++ + V V +AL+ MY+K G + +
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP R+ +SW A+I+G G + L F M V D T SS + A G
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H +K GF+ V N L MY G + G ++F M +DVVSWTT+I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ AV+ ++ M P+E T A+V+S CA LG ++ G +LH +R GL+
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---LNNRSFEALIFFRK 490
+ +AN+++ MYSKC +D A VF + +++ISW+++I G +F+ L + R+
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+PN S+LS C + L GK++HAH L +G+ + + +AL++MY +CG +
Sbjct: 365 E--GPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSI 422
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
K A F+ E ++ +W ++ GYAE G A + F+K+
Sbjct: 423 KEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKL 463
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 245/468 (52%), Gaps = 17/468 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH KT SV +G+A + M++K G + VF +M R++ SW +I G +
Sbjct: 87 GESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVR 146
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ EAL+ + M W+ V D YTF L+ C L G+E+H ++ G+ A
Sbjct: 147 AGYNKEALAYFSDM-WIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSF 205
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N L TMY KCG L +F+ M +RD +SW +I + G+ + F MRE
Sbjct: 206 VANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETD 265
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T ++VIS +G + G ++H +VI+ G D +SV N ++ MY +
Sbjct: 266 VSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLAS 325
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF + +D++SW+TMIS Y ++A + M EG P+E ASVLS C +
Sbjct: 326 TVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMA 385
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G +LH + GL ++ + LI+MYSKC I +A ++F + N++SWT++I
Sbjct: 386 ILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMIN 445
Query: 474 GLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-------KEIHAHA 525
G + S EA+ F+K+ + L+P+SVT +++L+AC+ G + G ++H
Sbjct: 446 GYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVH--- 502
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+I + D + ++D+ R GR+ A + S +RD W+ LL
Sbjct: 503 -QICPSKDHY--GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 191/362 (52%), Gaps = 9/362 (2%)
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+N ++ VK G L AR +FD M +RD ISW +ISGY + L LF M V
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKM---WV 60
Query: 295 DP----DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+P D LS + A L G +HGY +K F + V V + L+ MY+ G +
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
EG VF M ++VVSWT +I+ + +A+ + M + D T +S L ACA
Sbjct: 121 EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACA 180
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L+ G ++H ++ G + +ANTL MY+KC +D L +F + ++V+SWT+
Sbjct: 181 DSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTT 240
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II+ + A+ FR+M ++ PN T +++S CA +G + G+++HAH +R G
Sbjct: 241 IIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRG 300
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + N+++ MY +C ++ A F + RD+ +W+ +++GYA+ G G A ++
Sbjct: 301 LVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLS 360
Query: 589 KM 590
M
Sbjct: 361 WM 362
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 185/398 (46%), Gaps = 45/398 (11%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A+K M+E ++ +E ++ C + G LH+ V + S+ +
Sbjct: 249 GQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVA 308
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV--G 191
N+ ++M+ K L A VF + RD+ SW+ +I GYA+ G +EA + + W+
Sbjct: 309 NSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA---FDYLSWMRRE 365
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ + F VL CG + L++GK++H HV+ G E + V +ALI MY KCG + A
Sbjct: 366 GPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+FD + +SW AMI+GY E+G + + LF + +V + PD +T +V++A
Sbjct: 426 SKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS-- 483
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
H ++ +GF N L KV SKD +
Sbjct: 484 ---------HAGLVDLGFH----YFNSL-------------SKVHQICPSKDHYGCMIDL 517
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-- 429
C G + + M+++ D++ +++L AC G++D G + + ++
Sbjct: 518 LCRAG-----RLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPN 572
Query: 430 -LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+++I +AN MY+ +A EV + K V+
Sbjct: 573 CAVTHITLAN----MYAAKGKWKEAAEVRKMMKSKGVV 606
>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 737
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 266/508 (52%), Gaps = 40/508 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGN--------------------AFLSMFVKFGDLGHAWYVF 153
GL HS VS T+ L RLGN LS K GD+ +A+ VF
Sbjct: 87 GLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 154 GKMCDRDLFS-WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
KM +RD + WN +I G ++G+ + ++ L++ M +G V+ D + F +L C
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGFATILSMCD-YGS 204
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD--GMPKRDRISWNAMI 270
L GK+VH VI+ G+ VVNALITMY C +V A LVF+ + RD++++N +I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 271 SGY--FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
G F+ E L++F M E + P +T SV+ + +G +VHG IK G
Sbjct: 265 DGLAGFKRDE---SLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTG 318
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ V N + MY SF + KVF +E KD+V+W TMIS Y + L A+ Y+
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M G PDE T S+L+ +LD+ + ++ GL S I I+N LI YSK
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM---LNLKPNSVTLVSI 505
I+KA +F + KN+ISW +II G N FE L F ++ + + P++ TL ++
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
LS C +LM G + HA+ LR G + + NAL++MY +CG ++ + FN +E+DV
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMID 592
+WN L++ Y+ G+G A ++ M D
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQD 583
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 258/522 (49%), Gaps = 30/522 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E +++ M +L + D+ ++ +C++ D G +HS+V K ++ +
Sbjct: 168 SGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG-SLDFGKQVHSLVIKAGFFIASSV 226
Query: 133 GNAFLSMFVKFGDLGHAWYVFGK--MCDRDLFSWNVLIGGYAKAGF-FDEALSLYQRMFW 189
NA ++M+ + A VF + + RD ++NV+I G A GF DE+L ++++M
Sbjct: 227 VNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKML- 283
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P TF V+ +C G +VH I+ GYE V NA +TMY D
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF+ + ++D ++WN MIS Y + + ++ M + V PD T S+++ S
Sbjct: 341 AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL 400
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D + V +IK G S + + N LI Y G E+ + +F R K+++SW
Sbjct: 401 ---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 370 MISCYEGSVLPDKAVETYQ-MMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+IS + + P + +E + ++E+E +PD T++++LS C +L LG + H +R
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G +I N LI+MYS+C I +LEVF+Q+ +K+V+SW S+I + A+
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 488 FRKMMLNLK--PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----L 540
++ M K P++ T ++LSAC+ G + G EI V F G + N L
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI----FNSMVEFHGVIRNVDHFSCL 633
Query: 541 LDMYVRCGRMKPAWNQFNSNERDVSA----WNILLTGYAERG 578
+D+ R G + A + +E+ + + W L + A G
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 217/470 (46%), Gaps = 44/470 (9%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L + N + G ++G AL L+ + ++PD Y+ + T + D G +VH
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF------ 274
+ IR G V N L+++Y + G+L + FD + + D SW ++S F
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 275 --------------------------ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
E+G + + LF M ++ V D ++++S
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVS 366
+ G G++VH VIK GF SV N LI MY + + VF + +D V+
Sbjct: 201 DY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ +I G D+++ ++ M P ++T SV+ +C+C +G ++H LA+
Sbjct: 260 FNVVIDGLAG-FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAI 315
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+TG Y +++N + MYS + A +VF + +K++++W ++I A+
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 487 FFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+++M ++ +KP+ T S+L+ + L + + A ++ G++ + NAL+ Y
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYS 432
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ G+++ A F S +++ +WN +++G+ G E F +++S+
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLG 147
E+ I D L L+ +C G H+ V + +GNA ++M+ + G +
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
++ VF +M ++D+ SWN LI Y++ G + A++ Y+ M G V PD TF VL C
Sbjct: 542 NSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 208 GGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR--DRI 264
++ G E+ ++ F G +VD + L+ + + G L A + K R+
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 265 S-WNAMISGYFENGEYMKGLMLF-IMMREVLVDPD-FMTLSSVISAS 308
W A+ S +G+ G M+ ++M + DP ++ LS++ + +
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGA 708
>gi|255569195|ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535145|gb|EEF36825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 249/458 (54%), Gaps = 5/458 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F +G L A VF + ++ ++ ++ G+AK D AL + RM V+P
Sbjct: 82 LISLFCNYGSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKH-DNVRP 140
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L CG DL+RGKE+H +I G+ ++ + A++++Y KC + A +F
Sbjct: 141 VVYNFTYLLTLCGDNFDLRRGKEIHGQLITSGFSWNLFAMTAVVSLYCKCRVIGDAYKMF 200
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D M +RD + WN +ISGY +NG L L + E PD +T+ SV+ A + +
Sbjct: 201 DRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRSLR 260
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CY 374
G+ +H YVI+ GF V++ L+ MY + +F M S+ VV+W +MI+ C
Sbjct: 261 FGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCV 320
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
E P++A ++ M EG P ++T+ VL ACA G+L+ G +H+L L S +
Sbjct: 321 ENGD-PEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNV 379
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
+ N+LI MYSKCK +D A +F + ++ ++SW ++ILG N R EAL FF +M
Sbjct: 380 SVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQ 439
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
N+KP+S T+VS++ A A + K IH +R + F+ AL+DMY +CG + A
Sbjct: 440 NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTA 499
Query: 554 WNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
FN +ER V WN ++ Y G G A + F +M
Sbjct: 500 RKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEM 537
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 229/442 (51%), Gaps = 2/442 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N SL+ AL + M+ N+ L+ LC G +H + + ++
Sbjct: 120 NSSLDSALLFFCRMKHDNVRPVVYNFTYLLTLCGDNFDLRRGKEIHGQLITSGFSWNLFA 179
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A +S++ K +G A+ +F +M +RDL WN +I GYA+ G AL L ++F G
Sbjct: 180 MTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGH 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD T VL + L+ GK +H +VIR G++ V++ AL+ MY KC L AR
Sbjct: 240 -RPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLGTAR 298
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++FDGM R ++WN+MI+G ENG+ + +LF M + + P +T+ V+ A G
Sbjct: 299 VIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSG 358
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ VH V + +VSV N LI MY + +F ++++ +VSW MI
Sbjct: 359 DLEQGKFVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMIL 418
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + ++A+ + M+++ PD T+ SV+ A A L +H L +R L
Sbjct: 419 GYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDD 478
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+DMY+KC I A ++F+ + +++VI+W S+I + EA+ F +M
Sbjct: 479 TVFVMTALVDMYAKCGAIHTARKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEMQ 538
Query: 493 L-NLKPNSVTLVSILSACARIG 513
+KPN VT + +LSAC+ G
Sbjct: 539 KGTIKPNDVTFLCVLSACSHSG 560
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 7/398 (1%)
Query: 197 VYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
+Y P +L C V +L ++ +I+ G+ ++ LI+++ G L A V
Sbjct: 42 IYKHPTAVLLELCTSVKELH---QIIPSIIKNGFYSEELFQTKLISLFCNYGSLTEAARV 98
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + + ++ M+ G+ +N L+ F M+ V P + +++ D
Sbjct: 99 FEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNVRPVVYNFTYLLTLCGDNFDL 158
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G+E+HG +I GFS ++ ++ +Y + K+F RM +D+V W T+IS Y
Sbjct: 159 RRGKEIHGQLITSGFSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGY 218
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ L A+E + EG PD +TI SVL A A + +L G +H +R G +
Sbjct: 219 AQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLV 278
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
I+ L+DMYSKC + A +F + + V++W S+I G N EA + F+KMM
Sbjct: 279 NISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDE 338
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
L+P VT++ +L ACA G L GK +H + + + + N+L+ MY +C ++ A
Sbjct: 339 GLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFA 398
Query: 554 WNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N F N R + +WN ++ GYA+ G+ A FF +M
Sbjct: 399 ANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEM 436
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 1/351 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG + AL+ + + E D +V+++ R G +H+ V +
Sbjct: 212 NTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIR 271
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + A + M+ K LG A +F M R + +WN +I G + G +EA L
Sbjct: 272 AGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVL 331
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M G++P T VL C DL++GK VH V +++V V+N+LI+MY
Sbjct: 332 FKKMM-DEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMYS 390
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A +F+ + R +SWNAMI GY +NG + L F M+ + PD T+ S
Sbjct: 391 KCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVS 450
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
VI A + + + +HG VI+ D V V L+ MY G K+F+ M +
Sbjct: 451 VIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTARKLFNMMSERH 510
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
V++W +MI Y L +AV+ + M+ P+++T VLSAC+ G
Sbjct: 511 VITWNSMIDAYGTHGLGKEAVQLFVEMQKGTIKPNDVTFLCVLSACSHSGQ 561
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
EL K ++ +IK GF + LI ++ ++G+ E +VF +E+K +
Sbjct: 52 ELCTSVKELHQIIPSIIKNGFYSEELFQTKLISLFCNYGSLTEAARVFEPIENKLEALYH 111
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM+ + + D A+ + M+ + P +L+ C +L G ++H + +
Sbjct: 112 TMLKGFAKNSSLDSALLFFCRMKHDNVRPVVYNFTYLLTLCGDNFDLRRGKEIHGQLITS 171
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + ++ +Y KC+ I A ++F ++ +++++ W +II G N + AL
Sbjct: 172 GFSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELV 231
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
K+ +P+SVT+VS+L A A I +L GK IHA+ +R G + + AL+DMY +C
Sbjct: 232 PKIFEEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKC 291
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A F+ R V WN ++ G E G A+ F+KM+D
Sbjct: 292 DSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMD 337
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 241/437 (55%), Gaps = 4/437 (0%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M +RD+ SWN L+ + G F +A M G +V + V+ CG + K
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMM-RSGFPLNVASLVSVVPACGTEQEEKF 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H ++ G V++ NAL+ MY K GD+ + VFDGM +++ +SWN+ I +
Sbjct: 60 GLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 119
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G Y L +F M E V P +TLSS++ A +G LGREVHGY IK D+ V
Sbjct: 120 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV 179
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ MY FG+ E+ +F +M+ ++VVSW MI+ + +A M+ G
Sbjct: 180 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGE 239
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+ IT+ +VL ACA + +L +G ++H ++R GL+ + I+N LIDMYSKC + A
Sbjct: 240 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 299
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
+F + +K+ +S+ ++ILG + FE+L+ F++M + + ++V+ + LSAC +
Sbjct: 300 IFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSV 358
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
GKEIH +R ++ FL N+LLD+Y + G + A FN ++DV++WN ++ G
Sbjct: 359 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 418
Query: 574 YAERGQGALAEEFFRKM 590
Y GQ +A E F M
Sbjct: 419 YGMHGQIDIAFELFELM 435
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 251/488 (51%), Gaps = 3/488 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +NG A + L SM ++ +LV++V C ++ GL +H++ K
Sbjct: 10 NSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVK 69
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V L NA + M+ KFGD+ + VF M +++ SWN IG + AGF+ + L +
Sbjct: 70 VGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRM 129
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M V P T +L + G+EVH + I+ + D+ V N+L+ MY
Sbjct: 130 FRKMS-EHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 188
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L +A +F+ M R+ +SWNAMI+ +NG + L M++ P+ +TL +
Sbjct: 189 KFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVN 248
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + K+G+++H + I+ G D+ + N LI MY G +F R E KD
Sbjct: 249 VLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSE-KD 307
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ T+I Y S +++ ++ M + G D ++ LSAC L G ++H
Sbjct: 308 DVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHC 367
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +R L + ++N+L+D+Y+K + A ++F++I K+V SW ++ILG ++ +
Sbjct: 368 VLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDI 427
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F M + L + V+ +++L+AC+ G + GK+ + + + ++D
Sbjct: 428 AFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVD 487
Query: 543 MYVRCGRM 550
+ R G++
Sbjct: 488 LLGRAGQL 495
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 4/419 (0%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L+ M E N+ L +L+ +D G +H K L + + N+ + M
Sbjct: 127 LRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDM 186
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ KFG L A +F +M DR++ SWN +I + G EA L M G P+ T
Sbjct: 187 YAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDM-QKSGECPNSIT 245
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
VL C + LK GK++H IR G D+ + NALI MY KCG L AR +F+
Sbjct: 246 LVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE-RS 304
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
++D +S+N +I GY ++ + L+LF MR V +D D ++ +SA + K G+E
Sbjct: 305 EKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKE 364
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H +++ S + N L+ +Y G K+F+++ KDV SW TMI Y
Sbjct: 365 IHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQ 424
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
D A E +++M+ +G D ++ +VL+AC+ G +D G K + + +
Sbjct: 425 IDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYAC 484
Query: 440 LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++D+ + + K E+ +P N W +++ R++ + E + + + LKP
Sbjct: 485 MVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHG-NIELAQWAAEHLFELKP 542
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 266/514 (51%), Gaps = 10/514 (1%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-----LGNAFLSMF 140
M+ I + A ++ C R EG +H +V + R L N + M+
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTF 200
++ G A VF +M D+++ +W LI + AG F +A+ L+++M + GV PD TF
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKML-LSGVSPDRITF 119
Query: 201 PCVL-RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+L + G +L GK VH H+++ GYE D V+N ++ MY KCGD+ +A VFD +
Sbjct: 120 TSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ 179
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ SW +I+ Y +NG M+ L L M + V PD T ++V+ A VG + +
Sbjct: 180 DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239
Query: 320 VHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H I G D +V LI +Y G EE VF ++++KD+VSW++MI+ + S
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSG 299
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
A++ +M+ EG P+ +T +VL A L G ++H ++ G + + +
Sbjct: 300 QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTS 359
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L+ MY ++ A +F +++V+SW+S+I G N AL FR+M ++ ++P
Sbjct: 360 ALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQP 419
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
NSVT VS + ACA +GAL G ++H +G+ D + AL+++Y +CGR++ A F
Sbjct: 420 NSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF 479
Query: 558 -NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++++ W + Y + G G+ + + M
Sbjct: 480 LGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGM 513
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 254/479 (53%), Gaps = 12/479 (2%)
Query: 104 LCEW---KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L +W +R DEG +HS + +T + N + M+ K GD+ A VF + D +
Sbjct: 123 LLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPN 182
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+FSW ++I YA+ G E L L RM G VKPD YTF VL C V L+ K +H
Sbjct: 183 VFSWTIIIAAYAQNGHCMEVLRLLSRMNQAG-VKPDGYTFTTVLGACTAVGALEEAKILH 241
Query: 221 VHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
I G + D V ALI +Y KCG L A VF + +D +SW++MI+ + ++G+
Sbjct: 242 AATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQA 301
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ L ++M V P+ +T +V+ A + + G+E+H +++ G+SDDV + + L
Sbjct: 302 KSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSAL 361
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+KMY ++G E +F +DVVSW++MI+ Y + P +A+ ++ ME +G P+
Sbjct: 362 VKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNS 421
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T S + ACA +G L G +LH+ GL + +A L+++Y KC +++A VF
Sbjct: 422 VTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLG 481
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+ KN+++WTSI + N +L M L +KP+ + V+IL +C G +
Sbjct: 482 MKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQM--S 539
Query: 519 KEIHAHAL---RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTG 573
K +H + L G+A ++D+ R G+++ A N+ + + S AW +LLT
Sbjct: 540 KGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTA 598
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 167/351 (47%), Gaps = 10/351 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S + +G + A++ L M + + VN++ + + G +H+ + +
Sbjct: 289 SSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQ 348
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V L +A + M+ +G + A +F +RD+ SW+ +I GY++ ALSL
Sbjct: 349 AGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSL 408
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M V GV+P+ TF + C GV L+RG ++H V G + DV V AL+ +Y
Sbjct: 409 FREM-EVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYG 467
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A VF GM K++ ++W ++ Y +NG + L L M + PD + +
Sbjct: 468 KCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVA 527
Query: 304 VISASELVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++ + G ++ + +H Y + G + V C ++ + G E E++ + M+
Sbjct: 528 ILVSCNYAG--QMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMK 585
Query: 361 SKDVVSWTTMIS---CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ ++W +++ + + +A E +E + + P + ++SV A
Sbjct: 586 FESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATP-YVLLSSVFCA 635
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFD-----GFLPNALLDMYVRCGRMKPAWNQF 557
+IL+AC+ + AL GK +H +R + D L N ++ MY+RCG A + F
Sbjct: 14 AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +++V AW L++ + G A FRKM+
Sbjct: 74 DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKML 108
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 266/519 (51%), Gaps = 7/519 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L +V+ C G +H T V +G+A + M+ G L A F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RD WNV++ GY KAG A+ L++ M V G +P+ T C L C DL
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNM-RVSGCEPNFATLACFLSVCAAEADL 258
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G ++H ++ G E +V V N L++MY KC L A +F+ +P+ D ++WN MISG
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + L LF M PD +TL S++ A + K G+EVHGY+I+ D
Sbjct: 319 VQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDA 378
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ + L+ +Y + ++ + DVV +T+IS Y + + +KA++ ++ + +
Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P+ +T+ASVL ACA + L LG ++H +R + + L+DMY+KC +D +
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
+F ++ K+ ++W S+I N EAL FR+M M +K N+VT+ S LSACA +
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASL 558
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNIL 570
A+ GKEIH ++ + D F +AL+DMY +CG M+ A +F ++ +VS WN +
Sbjct: 559 PAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSI 617
Query: 571 LTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
++ Y G + F +M + K + + L C
Sbjct: 618 ISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISAC 656
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 252/481 (52%), Gaps = 11/481 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
L + +C + G+ LHS+ K V + N LSM+ K L AW +F +
Sbjct: 245 LACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP 304
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DL +WN +I G + G DEAL L+ M G +PD T +L + LK+GK
Sbjct: 305 RDDLVTWNGMISGCVQNGLLDEALGLFCDMLR-SGARPDSVTLVSLLPALTDLNGLKQGK 363
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EVH ++IR D +V+AL+ +Y KC D+ AR ++D D + + +ISGY NG
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNG 423
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
K L +F + E + P+ +T++SV+ A + LG+E+HGYV++ + V +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G + +FS+M KD V+W +MIS + + P +A++ ++ M EG
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +TI+S LSACA L + G ++H + ++ + + I + LIDMY+KC ++ AL VF
Sbjct: 544 NNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVF 603
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+PDKN +SW SII + E++ F +M KP+ VT ++++SACA G +
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVE 663
Query: 517 CGKEIHAHALR---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNIL 570
G ++ + I + F ++D+Y R GR+ A QF ++ + D W L
Sbjct: 664 EGLQLFQCMTKEYLIAPRMEHF--ACMVDLYSRSGRLDKAI-QFIADMPFKPDAGIWGAL 720
Query: 571 L 571
L
Sbjct: 721 L 721
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 259/506 (51%), Gaps = 13/506 (2%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHS--VVSKTMS-HLSVRLGNAFLSMFV---KFGDLGHA 149
D L+ L+R C GL +H+ VVS +S H + L L M+V +F D
Sbjct: 33 DRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTC 207
+ + WN LI G+ AG A+ Y +M W PD +T P V+++C
Sbjct: 93 FSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKM-WTHPAAPSPDAHTLPYVVKSC 151
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
+ + G+ VH G +DV V +ALI MY G L AR FDGMP RD + WN
Sbjct: 152 AALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWN 211
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
M+ GY + G+ + LF MR +P+F TL+ +S D G ++H +K
Sbjct: 212 VMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKC 271
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVET 386
G +V+V N L+ MY ++ ++F + D+V+W MIS C + +L D+A+
Sbjct: 272 GLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLL-DEALGL 330
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M G+ PD +T+ S+L A L L G ++H +R + + + L+D+Y K
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
C+ + A ++ +V+ +++I G LN S +AL FR ++ +KPN+VT+ S+
Sbjct: 391 CRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASV 450
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
L ACA I AL G+EIH + LR ++ +AL+DMY +CGR+ + F+ + +D
Sbjct: 451 LPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDE 510
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
WN +++ +++ G+ A + FR+M
Sbjct: 511 VTWNSMISSFSQNGEPQEALDLFRQM 536
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 201/400 (50%), Gaps = 10/400 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEAD---VDVVNALITMYVKCGDLVRARLVFDGMP 259
+LR C P L G ++H + G ++ + + L+ MYV A VF +P
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 260 KR---DRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDE 314
+ + WN +I G+ G + ++ ++ M PD TL V+ + +G
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
LGR VH G + DV V + LIKMY G + F M +D V W M+ Y
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ AV ++ M G P+ T+A LS CA +L G++LH LA++ GL +
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ANTL+ MY+KC+C+D A +F +P ++++W +I G N EAL F M+ +
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+P+SVTLVS+L A + L GKE+H + +R V D FL +AL+D+Y +C ++ A
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397
Query: 554 WNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
N +++ DV + +++GY G A + FR +++
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLE 437
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 34/347 (9%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LNG E+AL+ + E I + + +++ C G +H V +
Sbjct: 421 LNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCY 480
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ +A + M+ K G L + Y+F KM +D +WN +I +++ G EAL L+++M +
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMC-ME 539
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K + T L C +P + GKE+H +I+ +AD+ +ALI MY KCG++ A
Sbjct: 540 GIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELA 599
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ MP ++ +SWN++IS Y +G + + M+E PD +T ++ISA
Sbjct: 600 LRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISAC--- 656
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
H +++ G + + + K YL + RME + M+
Sbjct: 657 --------AHAGLVEEG----LQLFQCMTKEYL----------IAPRME-----HFACMV 689
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y S DKA++ M + PD ++L AC N++L
Sbjct: 690 DLYSRSGRLDKAIQFIADMPFK---PDAGIWGALLHACRVHRNVELA 733
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS---YIIIANTLID 442
T+ E + + ++L C +L LG+++H A+ +G +S ++ + L+
Sbjct: 19 TFSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLG 78
Query: 443 MYSKCKCIDKALEVFHQIPDK---NVISWTSIILGLRLNNRSFEALIFFRKMMLN---LK 496
MY + A+ VF +P + + W +I G A++F+ KM +
Sbjct: 79 MYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPS 138
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P++ TL ++ +CA +GA+ G+ +H A G+A D ++ +AL+ MY G ++ A +
Sbjct: 139 PDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ RD WN+++ GY + G A FR M
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNM 233
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 263/519 (50%), Gaps = 7/519 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E L + +R C R G +H V +K +V +G A ++++ K G + A VF
Sbjct: 136 NEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVF 195
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ R+ +W +I GY++AG AL L+ RM + GV+PD + C G+ +
Sbjct: 196 DALPARNPVTWTAVITGYSQAGQAGVALELFGRM-GLDGVRPDRFVLASAASACSGLGFV 254
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++H + R E+D VVNALI +Y KC L+ AR +FD M R+ +SW MI+GY
Sbjct: 255 EGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGY 314
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+N + + +F + + PD +S++++ + GR+VH +VIK D
Sbjct: 315 MQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDE 374
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N LI MY + E VF + D +S+ MI Y AVE + M
Sbjct: 375 YVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYC 434
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P +T S+L + +L+L ++H L +++G + + LID+YSK +D A
Sbjct: 435 SLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA 494
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
VF + +++++ W ++I GL N R EA+ F ++ ++ L PN T V++++ + +
Sbjct: 495 KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL 554
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILL 571
++ G++ HA ++ G D + NAL+DMY +CG ++ F S +DV WN ++
Sbjct: 555 ASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMI 614
Query: 572 TGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
+ YA+ G A F M++ G N+ + + C
Sbjct: 615 STYAQHGHAEEALHVF-GMMEGAGVEPNYVTFVSVLSAC 652
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 236/466 (50%), Gaps = 7/466 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L + K G LG A +F M R+L SW I YA+ G D+AL L+ G
Sbjct: 67 LANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAG 126
Query: 192 GVKPD-----VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
PD + LR C + G++VH + G +A+V V AL+ +Y K G
Sbjct: 127 AASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAG 186
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A VFD +P R+ ++W A+I+GY + G+ L LF M V PD L+S S
Sbjct: 187 RIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAAS 246
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A +G + GR++HGY + D SV N LI +Y ++F ME++++VS
Sbjct: 247 ACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVS 306
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WTTMI+ Y + L +A+ + + G PD S+L++C L + G ++H +
Sbjct: 307 WTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVI 366
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEAL 485
+ L S + N LIDMY+KC+ + +A VF + + + IS+ ++I G RL + +
Sbjct: 367 KADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVE 426
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
IF + +LKP+ +T VS+L + L K+IH ++ G + D + +AL+D+Y
Sbjct: 427 IFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYS 486
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + A F+ RD+ WN ++ G A+ +G A + F ++
Sbjct: 487 KFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL 532
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 225/439 (51%), Gaps = 8/439 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL+ M + D L + C + G +H +T + + NA +
Sbjct: 222 ALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALID 281
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV---GGVKP 195
++ K L A +F M +R+L SW +I GY + EA+S MFW G +P
Sbjct: 282 LYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMS----MFWQLSQAGWQP 337
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV+ +L +CG + + +G++VH HVI+ E+D V NALI MY KC L AR VF
Sbjct: 338 DVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVF 397
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + + D IS+NAMI GY G+ + +F MR + P +T S++ S D +
Sbjct: 398 EALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLE 457
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +++HG ++K G S D+ + LI +Y F ++ + VFS M+++D+V W MI
Sbjct: 458 LSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLA 517
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++AV+ + + G P+E T ++++ + L ++ G + H ++ G S
Sbjct: 518 QNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPH 577
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
I+N LIDMY+KC I++ +F K+VI W S+I + + EAL F M
Sbjct: 578 ISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAG 637
Query: 495 LKPNSVTLVSILSACARIG 513
++PN VT VS+LSACA G
Sbjct: 638 VEPNYVTFVSVLSACAHAG 656
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 193/380 (50%), Gaps = 8/380 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + G D+ + N L+ Y K G L AR +FD MP R+ +SW + IS Y ++G
Sbjct: 52 AHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGR 111
Query: 279 YMKGLMLFIMMREVLV------DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
L+LF P+ L+S + A + G +VHG K+G +
Sbjct: 112 EDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN 171
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V L+ +Y G + VF + +++ V+WT +I+ Y + A+E + M
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGL 231
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G PD +AS SAC+ LG ++ G ++H A RT S + N LID+Y KC +
Sbjct: 232 DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACAR 511
A +F + ++N++SWT++I G N+ EA+ +F++ +P+ SIL++C
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ A+ G+++HAH ++ + D ++ NAL+DMY +C + A F + E D ++N +
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAM 411
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ GYA G A E F KM
Sbjct: 412 IEGYARLGDLTGAVEIFGKM 431
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 169/358 (47%), Gaps = 44/358 (12%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L A++ M+ ++ V+L+ + + + +H ++ K+ + L + G
Sbjct: 419 GDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAG 478
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + ++ KF + A VF M +RD+ WN +I G A+ +EA+ L+ R+ V G+
Sbjct: 479 SALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARL-RVSGL 537
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +TF ++ + + G++ H +I+ G ++D + NALI MY KCG + RL
Sbjct: 538 TPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRL 597
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ +D I WN+MIS Y ++G + L +F MM V+P+++T SV+SA G
Sbjct: 598 LFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAG- 656
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-----WT 368
L+ +EG F+ M++K V +
Sbjct: 657 -------------------------LV---------DEGLHHFNSMKTKYAVEPGTEHYA 682
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
++++ + S A E + M E P S+LSAC GN+++G ++A+
Sbjct: 683 SVVNLFGRSGKLHAAKEFIERMPIE---PVATIWRSLLSACHLFGNVEIGRYATEMAL 737
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 118/306 (38%), Gaps = 43/306 (14%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L N E+A+K ++ + +E V LV + G H+ + K
Sbjct: 510 NAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIK 569
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA + M+ K G + +F +D+ WN +I YA+ G +EAL +
Sbjct: 570 AGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHV 629
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMY 242
+ M GV+P+ TF VL C + G + ++ E + +++ ++
Sbjct: 630 FG-MMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLF 688
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ G L A+ + MP ++P
Sbjct: 689 GRSGKLHAAKEFIERMP----------------------------------IEPVATIWR 714
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM---YLSFGNREEGEKVFSRM 359
S++SA L G+ ++GR Y +M D + P + M Y S G + +K+ M
Sbjct: 715 SLLSACHLFGNVEIGR----YATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGM 770
Query: 360 ESKDVV 365
+ VV
Sbjct: 771 DCAGVV 776
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 244/478 (51%), Gaps = 4/478 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L VK G L A Y+F KM RD SW LI GY A EAL L+ M+ G
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + L+ C ++ G+ +H ++ G V V +ALI MY+K G + +
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M R+ +SW A+I+G G M+GL+ F M V D T + + AS
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H IK GF + V N L MY G + ++F +M DVVSWTT+IS
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLIST 300
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + AVE ++ M P++ T A+V+S+CA L G ++H +R GL++
Sbjct: 301 YVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNA 360
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN++I +YSKC + A VFH I K++ISW++II + EA + M
Sbjct: 361 LSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRR 420
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
KPN L S+LS C + L GK++HAH L IG+ + + +A++ MY +CG ++
Sbjct: 421 EGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQE 480
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A FN + D+ +W ++ GYAE G A F K+ + K ++ +G+ C
Sbjct: 481 ASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTAC 538
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 248/502 (49%), Gaps = 15/502 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH K+ SV + +A + M++K G + VF KM R++ SW +I G
Sbjct: 143 GELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVH 202
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ E L LY W V D +TF L+ L GK +H I+ G++
Sbjct: 203 AGYNMEGL-LYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 261
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V+N L TMY KCG +F+ M D +SW +IS Y + GE + F MR+
Sbjct: 262 VINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSY 321
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T ++VIS+ + K G ++HG+V+++G + +SV N +I +Y G +
Sbjct: 322 VSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSAS 381
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF + KD++SW+T+IS Y +A + M EG P+E ++SVLS C +
Sbjct: 382 LVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMA 441
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G ++H + G+ ++ + +I MYSKC + +A ++F+ + ++ISWT++I
Sbjct: 442 LLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMIN 501
Query: 474 GLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIG 529
G + S EA+ F K+ + LKP+ V + +L+AC G + G + + RI
Sbjct: 502 GYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRIS 561
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL-----TGYAERGQGAL 582
+ + + L+D+ R GR+ A + S D W+ LL G +RG+
Sbjct: 562 PSKEHY--GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWT- 618
Query: 583 AEEFFRKMIDSKGNWRKLMGLF 604
AE+ + +S G L ++
Sbjct: 619 AEQLLQLDPNSAGTHITLANIY 640
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 182/359 (50%), Gaps = 12/359 (3%)
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+N+ + VK G L +AR +FD M RD ISW +I+GY + + L+LF M V
Sbjct: 60 LNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM---WV 116
Query: 295 DP----DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
P D +S + A L + G +HG+ +K G V V + LI MY+ G E
Sbjct: 117 HPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIE 176
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+G +VF +M +++VVSWT +I+ + + + + M D T A L A A
Sbjct: 177 QGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASA 236
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L G +H ++ G + NTL MY+KC D + +F ++ +V+SWT+
Sbjct: 237 DSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTT 296
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I A+ F++M + + PN T +++S+CA + A G++IH H LR+G
Sbjct: 297 LISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLG 356
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
+ + N+++ +Y +CG +K A F+ +D+ +W+ +++ Y+ QG A+E F
Sbjct: 357 LVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYS---QGGYAKEAF 412
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 262/511 (51%), Gaps = 6/511 (1%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+ IC + + L+ LC E LH + K L N + ++ GD
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L VF M +R + SW+ +I G+ + + L L+ M V P +F VLR
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI-EENVSPTEISFASVLR 119
Query: 206 TCGGVP-DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
C G ++ +++H +I G + N LI +Y K G ++ AR VFD + +D +
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SW AMISG+ +NG + + LF M + P SSV+S + +G ++H V
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
K G S + VCN L+ +Y N EKVFS+M+SKD VS+ ++IS D A+
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
E + M+ + PD +T+AS+LSACA G L G +LH ++ G+ S +I+ L+D+Y
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLY 359
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLN-LKPNSVTL 502
C I A E+F +NV+ W +++ +L+N S E+ FR+M + L PN T
Sbjct: 360 VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLS-ESFRIFRQMQIKGLIPNQFTY 418
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
SIL C +GAL G++IH ++ G F+ ++ + L+DMY + G++ A + E
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE 478
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
DV +W L++GYA+ A A + F++M++
Sbjct: 479 DDVVSWTALISGYAQHNLFAEALKHFKEMLN 509
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 267/539 (49%), Gaps = 5/539 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A+ M I +++ C + +D G LH++V K S L +
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++++ + + A VF KM +D S+N LI G A+ GF D AL L+ +M
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM-KRDY 309
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD T +L C L +G+++H +VI+ G +D+ V AL+ +YV C D+ A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + + WN M+ + + + +F M+ + P+ T S++ VG
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG ++H VIK GF +V VC+ LI MY G + + + DVVSWT +IS
Sbjct: 430 ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALIS 489
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L +A++ ++ M G D I +S +SACA + L+ G ++H + +G
Sbjct: 490 GYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSE 549
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
+ I N L+ +Y++C I +A F +I K+ ISW +I G + +AL F +M
Sbjct: 550 DLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMN 609
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L+ + T S +SA A I + GK+IHA ++ G D + NAL+ Y +CG ++
Sbjct: 610 RAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIE 669
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A +F E++ +WN ++TGY++ G G A F KM + N +G+ C
Sbjct: 670 DARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 728
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 233/456 (51%), Gaps = 2/456 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G + AL+ M+ + D + +L+ C +G LHS V K
Sbjct: 283 NSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIK 342
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + A L ++V D+ A +F ++ WNV++ + K E+ +
Sbjct: 343 AGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRI 402
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G+ P+ +T+P +LRTC V L G+++H VI+ G++ +V V + LI MY
Sbjct: 403 FRQM-QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A ++ + + D +SW A+ISGY ++ + + L F M + D + SS
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + GR++H G+S+D+S+ N L+ +Y G +E F ++++KD
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW +IS + S + A++ + M T S +SA A + N+ G ++H
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++ G S I ++N LI Y+KC I+ A F ++P+KN +SW ++I G + E
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNE 701
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG 518
A+ F KM + PN VT V +LSAC+ +G + G
Sbjct: 702 AVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKG 737
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 218/435 (50%), Gaps = 4/435 (0%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L ++ + MQ + ++ +++R C D G +H+ V KT +V + +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ K G L A + + + D+ SW LI GYA+ F EAL ++ M G++
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEML-NRGIQ 513
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D F + C G+ L +G+++H GY D+ + NAL+++Y +CG + A L
Sbjct: 514 SDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLE 573
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + +D ISWN +ISG+ ++G L +F M ++ F T S +SA+ + +
Sbjct: 574 FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANI 633
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K G+++H +IK GF D+ V N LI Y G+ E+ + F M K+ VSW MI+ Y
Sbjct: 634 KQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGY 693
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISY 433
++AV ++ M+ G MP+ +T VLSAC+ +G + G+ ++ GL+
Sbjct: 694 SQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPK 753
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++D+ S+ + +A + ++P + + W +++ + +++ E F + +
Sbjct: 754 PAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTV-HKNVEVGEFAAQHL 812
Query: 493 LNLKPNSVTLVSILS 507
L L+P +LS
Sbjct: 813 LELEPEDSATYVLLS 827
>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
Length = 690
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 274/536 (51%), Gaps = 45/536 (8%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
VD D L+R CE + +G Y+H+ + + LGN + M+ K G + A
Sbjct: 34 VDNDVYATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEA 93
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F ++ +++FSW +++G +A G +A+ +Y M + GV+PD F + C +
Sbjct: 94 FDQIHRKNVFSWTIMLGAFADCGHHRQAIQIYHAMV-LEGVRPDCVAFASIAGICSELQC 152
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ GK +H V+ G E+DV V N L+TMY KCG + AR VF + ++ ISWNAMI+
Sbjct: 153 FQAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAA 212
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ + G++ L L++ E V PD +TL A +GD GRE+H +++G D
Sbjct: 213 FAQCGDFASALELYV---EHPV-PDKITLILAAKACASLGDLDRGREIHARAVELGLESD 268
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESK--DVVSWTTMISCYEGSVLPDKAVETY-QM 389
+ V N LI MY + +++F +E+K DV+SW ++I+ Y + + +A+E + +
Sbjct: 269 LLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRER 328
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK- 448
M+ E P+ IT +++ AC+ L +L+ G +H+ + + + N L+ MY+KC
Sbjct: 329 MDVE---PNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGS 385
Query: 449 -----------------------------CIDKALEVFHQIPDKNVISWTSIILGL-RLN 478
C+ A+ VF + ++V++WT++I +
Sbjct: 386 IEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQE 445
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ S EA+ +F +M L+ KP+ VT S+L + AR+G L G+ +H L G D +
Sbjct: 446 HTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVG 505
Query: 538 NALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
ALLDMY +CG + A F+ R++ +WN ++ A+ G + E +R MI
Sbjct: 506 TALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMI 561
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 250/520 (48%), Gaps = 48/520 (9%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G QA++ +M + D A ++ +C + + G +H V + + V +
Sbjct: 116 GHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIVA 175
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++M+ K G + A VF ++ +++ SWN +I +A+ G F AL LY V
Sbjct: 176 NNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASALELY-----VEHP 230
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T + C + DL RG+E+H + G E+D+ V N+LI MY KC + A+
Sbjct: 231 VPDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKR 290
Query: 254 VFDGMP--KRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASEL 310
+FDG+ RD ISWN++I+ Y G + L LF RE + V+P+ +T ++I A
Sbjct: 291 LFDGLEAKNRDVISWNSIIAAYILAGMSSQALELF---RERMDVEPNRITFIALIDACST 347
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME---------- 360
+ D + GR +H + F+ +V+V N L+ MY G+ EE +F ME
Sbjct: 348 LCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLV 407
Query: 361 --------------------SKDVVSWTTMISCYEGSVLPD-KAVETYQMMEAEGSMPDE 399
S+DVV+WT MI+ + +AV+ + M+ +GS PDE
Sbjct: 408 IMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDE 467
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T ASVL + A LG L G +H + G S +++ L+DMYSKC + A F
Sbjct: 468 VTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDD 527
Query: 460 I-PDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGA--L 515
+ +N++SW ++I + + +R M+L ++PN VT ++L C+ G
Sbjct: 528 LGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFTNMLFLCSHGGGGDR 587
Query: 516 MCG--KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
CG + L GV +++D+ R GR++ A
Sbjct: 588 ECGIWDACASIVLEFGVKITPDHHCSIVDVLGRSGRLEEA 627
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR +H +++ G S + N L++MY G+ + ++ F ++ K+V SWT M+ +
Sbjct: 55 GRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWTIMLGAFAD 114
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A++ Y M EG PD + AS+ C+ L G +H + G S +I+
Sbjct: 115 CGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIV 174
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
AN L+ MYSKC ID A VF +I +KN ISW ++I AL + + +
Sbjct: 175 ANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASALELYVEHPV--- 231
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC---GRMKPA 553
P+ +TL+ ACA +G L G+EIHA A+ +G+ D + N+L+ MY +C G K
Sbjct: 232 PDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKRL 291
Query: 554 WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKC 607
++ + RDV +WN ++ Y G + A E FR+ +D + N + L C
Sbjct: 292 FDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRERMDVEPNRITFIALIDAC 345
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 264/515 (51%), Gaps = 7/515 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QAL+ MQ + D V +R C + D+G +H+ + ++ + NA +
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K A+ +F +M ++ SW +IG +A+ G L R + G++P++
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T VLR C +L G++VH +V+ G D + NAL+ MY K GD+ A LV
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MPKRD ISWN MISGY ++G+ +GL M++ + P +T +++++A D G
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEG 236
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ +H V+ MG D V + L+ MY G+ E+ ++ + ++ ++W T+I Y
Sbjct: 237 KSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARY 296
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A+ ++Q M+ +G D +T +L C+ +L GI LH + G S II+
Sbjct: 297 SDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVH 355
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N+L MY+KC +D A ++F +P +N +SW S+I + +A FF++M L +
Sbjct: 356 NSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSR 415
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ VT +S+L AC + G IH + G + NAL+ MY + G + A N
Sbjct: 416 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNV 475
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F++ ER+ +WN +L Y E+G A E F KM
Sbjct: 476 FDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM 510
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 252/522 (48%), Gaps = 19/522 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVR 131
+G ++ L+ L MQ+ + + L+ C EG +H SVV + V
Sbjct: 195 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEV- 253
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ + L M+ K G L ++ +R+ +WN +IG YA+ +AL +Q+M +
Sbjct: 254 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQM-QLQ 312
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVK D TF +L TC L +G +H + + G+E+ + V N+L MY KCG L A
Sbjct: 313 GVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESII-VHNSLTAMYAKCGSLDAA 371
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F+GMP R+ +SWN++IS ++G Y F M+ PD +T S++ A
Sbjct: 372 RKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQ 431
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ K G +H V++ GF V N LI MY G+ E VF M ++ VSW T++
Sbjct: 432 ANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTIL 491
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGL 430
+ Y L AVE + M+ D++T + L AC+ L G L G +H + G
Sbjct: 492 AAYVEKGLNRDAVEMFWKMDVA---RDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGF 548
Query: 431 ISYI--IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ + + A L++MY KC + +A ++F ++ ++V++WTS+I+ ++ +AL
Sbjct: 549 SNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLV 608
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL-RIGVAFDGFLPNALLDMYVR 546
+ M + +K + V +SILS C G L G + + G++ N ++D+ R
Sbjct: 609 KIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGR 668
Query: 547 CGRMKPAWNQFN--SNERDVSAWNILLT-----GYAERGQGA 581
G + A + + D W LL G ERG+ A
Sbjct: 669 AGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRA 710
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 290/568 (51%), Gaps = 32/568 (5%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC-EWKRGYDEGLYLH 118
T + NS ++ NG E + Y M + DE +L ++ C K + G +H
Sbjct: 230 TTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVH 289
Query: 119 SVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
S V K + + N+ ++ + + G A VF +++L +WN +I G +
Sbjct: 290 SSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRV 349
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG--YEADVDVV 235
+EA+ ++Q M +PDV T ++ CG L GKEVH ++I+ G YE + V
Sbjct: 350 NEAMCMFQEM--RSKNQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYE-ECSVG 406
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN---GEYMKGLMLFIMMREV 292
N+L+ +Y+KC D AR++F MP RD ISWN MISGY N GE K M + +
Sbjct: 407 NSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKA-----MFKGL 461
Query: 293 LVDPDFMTLSSVIS---ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
L + TLS+V++ + D G+ VH +++K GF VS N LI MY+ G
Sbjct: 462 LSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCG-- 519
Query: 350 EEGEKVFSRMES----KDVVSW-TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIA 403
+ FS +ES D++SW T ++ C + + D A+E +Q M + ++ PD IT+
Sbjct: 520 -DSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGD-ALEAFQFMHSTLTLNPDSITLV 577
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVLS C L LG +H +A++ + + + N L+ MY + + A +F + +
Sbjct: 578 SVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGR 637
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
N+ SW +I G NN A F++KM + +PN +++V I+ AC ++G L GK IH
Sbjct: 638 NLCSWNCMISGFAQNNEGLRAFQFYKKME-DFEPNEISIVGIICACTQLGDLRQGKNIHG 696
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGAL 582
H +R G+ + F+ +L+DMY +CGR+ + F S+ E+ ++ WN +++ + G G
Sbjct: 697 HVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLK 756
Query: 583 AEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
+ E F KM +S K + L C
Sbjct: 757 SIEIFWKMNNSGVKATRSTFIALLSACS 784
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 16/555 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L LN A+ M ++ +D ++V ++ R + G+ H + K
Sbjct: 133 NAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALK 192
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L N + M+ K GD + VF +M RD SWN ++ G G + +
Sbjct: 193 RCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYY 252
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYE-ADVDVVNALITM 241
++ M + D + CVL C + DL G+ VH VI+ GYE V N+LIT
Sbjct: 253 FKEMVR-SSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITF 311
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y + G A VF ++ ++WNAMI G EN + + +F MR PD TL
Sbjct: 312 YYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATL 370
Query: 302 SSVISASELVGDEKL---GREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
++ISA GD L G+EVHGY+IK G ++ SV N L+ +Y+ + +F
Sbjct: 371 VTIISA---CGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFR 427
Query: 358 RMESKDVVSWTTMISCYE-GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M +D++SW TMIS Y L ++A ++ + +EG T+ +V+ +C C +L+
Sbjct: 428 TMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLN 487
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGL 475
G +H ++ G ++ + AN+LI MY C A + I P ++ISW + I+G
Sbjct: 488 FGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGC 547
Query: 476 RLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N +AL F+ M L L P+S+TLVS+LS C + GK IH AL+ + F+
Sbjct: 548 VQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFN 607
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NALL MY R G + A F+S R++ +WN +++G+A+ +G A +F++KM D
Sbjct: 608 LRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMED 667
Query: 593 SKGNWRKLMGLFRKC 607
+ N ++G+ C
Sbjct: 668 FEPNEISIVGIICAC 682
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 262/539 (48%), Gaps = 18/539 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVS 122
N+ + L N + +A+ M+ N D LV ++ C EG +H ++
Sbjct: 337 NAMIKGLVENDRVNEAMCMFQEMRSKNQ-PDVATLVTIISACGDHGLLPEGKEVHGYIIK 395
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K + +GN+ L +++K D A +F M RDL SWN +I GY++ E
Sbjct: 396 KGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAK 455
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ G+ + T V+ +C DL GK VH ++++G+ V N+LI MY
Sbjct: 456 AMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMY 515
Query: 243 VKCGDLVRARLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMT 300
+ CGD + A + + + P D ISWN I G +NG Y L F M L ++PD +T
Sbjct: 516 ICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSIT 575
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L SV+S + + LG+ +H +K ++ V N L+ MY FG+ E E +FS +
Sbjct: 576 LVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLV 635
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+++ SW MIS + + +A + Y+ ME P+EI+I ++ AC LG+L G
Sbjct: 636 GRNLCSWNCMISGFAQNNEGLRAFQFYKKME--DFEPNEISIVGIICACTQLGDLRQGKN 693
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H +R GL + + I+ +L+DMYSKC +D ++ VF +K++ W S+I +
Sbjct: 694 IHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGL 753
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN- 538
+++ F KM +K T +++LSAC+ G G + + + + G +P
Sbjct: 754 GLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYY----HLMIEHFGIIPTP 809
Query: 539 ----ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++DM R GR++ A S +++ W LL+ +++ + + E + ++
Sbjct: 810 EHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLL 868
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 229/484 (47%), Gaps = 15/484 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH K+ + L + + ++ + + D+ A VF + DL WN I
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ +A+ L++ M V GV D + +L L+ G H ++ + D+ + N
Sbjct: 145 YGDAVVLFRWMVDVLGVI-DSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWN 203
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ MY KCGD + +VF MP RD SWN+M+SG NG F M
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQA 263
Query: 297 DFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDV-SVCNPLIKMYLSFGNREEGEK 354
D ++LS V+SA + D G VH VIK+G+ D SV N LI Y G E E+
Sbjct: 264 DEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEE 323
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVET---YQMMEAEGSMPDEITIASVLSACAC 411
VF +K++V+W MI +G V D+ E +Q M ++ + PD T+ +++SAC
Sbjct: 324 VFLSTSNKNLVTWNAMI---KGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGD 379
Query: 412 LGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L G ++H ++ G I + N+L+D+Y KC A +F +P +++ISW +
Sbjct: 380 HGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNT 439
Query: 471 IILGLRLNNR-SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G N+ EA F+ ++ L T+V+++ +C L GK +H+ L+
Sbjct: 440 MISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKY 499
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEF 586
G N+L+ MY+ CG A++ S D+ +WN + G + G A E
Sbjct: 500 GFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEA 559
Query: 587 FRKM 590
F+ M
Sbjct: 560 FQFM 563
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 195/378 (51%), Gaps = 5/378 (1%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++ G D V ++IT Y + D+ A VFD D I WNA IS N
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y ++LF M +VL D ++ ++S + + G HG +K D+S+ N
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNT 204
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G+ E VF RM +D SW +M+S + L + + ++ M D
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264
Query: 399 EITIASVLSACACLGNL-DLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEV 456
E++++ VLSAC+ L +L G +H ++ G + +AN+LI Y + + A EV
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEV 324
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALM 516
F +KN+++W ++I GL N+R EA+ F++M +P+ TLV+I+SAC G L
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQPDVATLVTIISACGDHGLLP 384
Query: 517 CGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
GKE+H + ++ G ++ + N+LLD+Y++C A F + RD+ +WN +++GY
Sbjct: 385 EGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGY 444
Query: 575 AERGQ-GALAEEFFRKMI 591
+ G A+ F+ ++
Sbjct: 445 SRNDSLGEEAKAMFKGLL 462
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 244/453 (53%), Gaps = 9/453 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LGN + + K G + A VF ++ R++FSW +++G YA G EAL L+ R
Sbjct: 49 LGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLF-REIQSR 107
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ D T L+ C DL+ G+ +H GYE+++ V AL++MY KCG L A
Sbjct: 108 GMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEA 167
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ VF + +R+R+SWNAM++ Y +NG + + L+ +M + PD T SV+ +
Sbjct: 168 KAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWK-- 225
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+ + G +H V++ GF + ++ N L+ MY S G ++ VF + K VVSW M+
Sbjct: 226 GEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAML 285
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSM--PDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ Y + KAV+ + +M E ++ P+ +T ++L ACA G L+ G K+H
Sbjct: 286 TAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASL 345
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL+S + + LI+MYS+C + A VF +P KN++SW +I + EAL
Sbjct: 346 GLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVH 405
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM L LKP+ T +S+L AC+ AL GK IHA G+ D + AL+++Y +C
Sbjct: 406 QKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKC 465
Query: 548 GRMKPAWNQF--NSNERDVSAWNILLTGYAERG 578
G ++ A N F + R++ WN +L +G
Sbjct: 466 GSLEQARNVFLDMKSRRNLVTWNSMLAAACTKG 498
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 255/509 (50%), Gaps = 15/509 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL +Q + +D LV+ ++ C +EG +H+ + +
Sbjct: 91 NGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIV 150
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A +SM+ K G L A VF + +R+ SWN ++ YA+ G +EA+ LY R+ G
Sbjct: 151 ATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLY-RLMCFEG 209
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD TF VL G + + G +H V+ G+ ++ + NAL++MY G + AR
Sbjct: 210 IKPDATTFVSVLDGWKG--EGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDAR 267
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM---REVLVDPDFMTLSSVISASE 309
VFDG+ ++ +SWNAM++ Y +NG Y K + LF M R LV+P+ +T +++ A
Sbjct: 268 YVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACA 327
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G + GR++H V +G +SV LI MY GN + VF + K++VSW
Sbjct: 328 ATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNV 387
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I Y G +A+ +Q ME EG PD+ T SVL AC+ L G +H L +G
Sbjct: 388 LIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASG 447
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFF 488
L I LI++Y KC +++A VF + +N+++W S +L E +
Sbjct: 448 LERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNS-MLAAACTKGGLEDCVEI 506
Query: 489 RKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHA-LRIGVAFDGFLPNALLDMYV 545
MM + P+ +T +S+L AC+ G++ G ++ A + G+A + ++D+
Sbjct: 507 IHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILG 566
Query: 546 RCGRMKPAWNQFNS---NERDVSAWNILL 571
R GR++ A N DV AW LL
Sbjct: 567 RVGRLEEAQEVLNRMPFQANDV-AWMTLL 594
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 205/399 (51%), Gaps = 7/399 (1%)
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ + +LR C DL K+ + R G+ D + N L+ Y KCG + AR VFD
Sbjct: 12 ISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFD 71
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ SW M+ Y +NG + L LF ++ + D +TL S + A + GD +
Sbjct: 72 RIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEE 131
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR +H +G+ ++ V L+ MY G+ EE + VF+ + ++ VSW M++ Y
Sbjct: 132 GRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQ 191
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ ++AV Y++M EG PD T SVL G + G ++H + +G S +
Sbjct: 192 NGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWK--GEGEHGTRIHDQVLESGFGSNTTL 249
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM----M 492
AN L+ MY +D A VF I +K V+SW +++ N R +A+ F KM
Sbjct: 250 ANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRR 309
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
++PNSVT V++L ACA G L G++IHA +G+ + AL++MY CG +
Sbjct: 310 ALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVL 369
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A + F+S +++ +WN+L+ YA G G A +KM
Sbjct: 370 AKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKM 408
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 273/514 (53%), Gaps = 15/514 (2%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M I D + L+ C +EG + ++ T L + + N ++M+VK G
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A F +M RD+ SW V+IG Y++ G F +L L++ M + G P+ TF +L
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREML-LEGTAPNSVTFVSILS 119
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL-VFDGMPKRDRI 264
C L++G+++H V+ E+ V V N+L+ MY +C +R+ F M +RD +
Sbjct: 120 GCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV 179
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASELVGDEKLGREVH 321
SW MI Y ++G++ + LF RE+L++ P+ +T S++S E + GR++H
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLF---REMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIH 236
Query: 322 GYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
V++ D+ V N I MY+ G + + F+RM+ +DVVSWT MI Y
Sbjct: 237 ALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGK 296
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+++ ++ M EG+ P+ +T S+LS C L+ G ++H L + + L S++++AN+
Sbjct: 297 FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANS 356
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLN-LKP 497
L+ MYS+C+ + + +F ++ ++ +SW++II+ R ++ +AL +R M+ + P
Sbjct: 357 LLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMP 416
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++ L +L AC + L GK +HAH + G+ D + +L++MY +CG + A F
Sbjct: 417 KTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVF 475
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ N R WN ++T Y E+ A FR+M
Sbjct: 476 DRINNRSRILWNSMITAYQEKDPHE-ALHLFREM 508
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 256/502 (50%), Gaps = 12/502 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
V+++ CE ++G +H++V ++ V + N+ L M+ + + +F +M
Sbjct: 319 FVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMS 378
Query: 158 DRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
RD SW+ +I ++ +AL LY+ M GV P VL CG + +LK G
Sbjct: 379 VRDSVSWSTIIMACSREDSHCRDALPLYRSMLH-EGVMPKTLALSMVLEACGSLAELKGG 437
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K VH HVI G E D+ V +L+ MY KCG + AR VFD + R RI WN+MI+ Y E
Sbjct: 438 KLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEK 496
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L LF M+ V PD +T +V++A D + GR +H ++ GF+ DV V
Sbjct: 497 DPH-EALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVA 555
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L MY G+ E VF M +DVVSW MI+ Y + A+ M+ EG
Sbjct: 556 TALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMR 615
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD+ T S+L+AC+ L G ++H + L + I++ LI MY+ C ++ A E+
Sbjct: 616 PDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREI 675
Query: 457 FHQI------PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSAC 509
F I +++ WTS+I + +AL + +M ++ + VT +S+L+AC
Sbjct: 676 FDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNAC 735
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWN 568
A + L G+ IHA +R G+A D + N+++ MY +CG A F + +D+S W
Sbjct: 736 AHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWT 795
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
L+ YA G G A FR++
Sbjct: 796 ALIASYARHGHGEQALWIFRRL 817
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 236/449 (52%), Gaps = 11/449 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G + ++M+ K G +G A VF ++ +R WN +I Y + EAL L++ M
Sbjct: 454 VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPH-EALHLFREM-QPE 511
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV PD TF VL C DL+ G+ +H ++ G+ ADV V AL MY KCG L A
Sbjct: 512 GVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEA 571
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD M RD +SWN MI+ Y + + + L M+ + PD T +S+++A
Sbjct: 572 RGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDP 631
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF------SRMESKDVV 365
GR++H ++ + +D+ + LI MY + G+ ++F SR +D+
Sbjct: 632 NRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLF 691
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
WT+MI+ YE KA+E Y+ M + D +T SVL+ACA L +L G +H
Sbjct: 692 LWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARV 751
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
MR GL + + +AN+++ MY KC D+A VF + K++ WT++I + +AL
Sbjct: 752 MRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQAL 811
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR++ + ++ +++T V++LSAC+ +G + G E A +G+ + + L+D+
Sbjct: 812 WIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLL 871
Query: 545 VRCGRMKPAWNQFNSNERDVSAWNILLTG 573
R G + A +F S V+A I+LT
Sbjct: 872 ARAGHLHTA-EEFLSR-MPVAANTIVLTA 898
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 201/409 (49%), Gaps = 8/409 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+AL MQ + D + ++ C + G +H+ + + VR+ A
Sbjct: 499 HEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATAL 558
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+M+ K G LG A VF M RD+ SWN +I Y + + A+SL M + G++PD
Sbjct: 559 FNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAM-QLEGMRPD 617
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF +L C L G+++H + E D+ +V LITMY CG L AR +FD
Sbjct: 618 KATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFD 677
Query: 257 GM------PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+ RD W +MI+ Y ++GEY K L L+ M V+ D +T SV++A
Sbjct: 678 NIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAH 737
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ D + G+ +H V++ G + DV+V N ++ MY G+ +E VF + + KD+ WT +
Sbjct: 738 LSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTAL 797
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y ++A+ ++ + +G +T ++LSAC+ +G ++ G + G+
Sbjct: 798 IASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGI 857
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+ + L+D+ ++ + A E ++P N I T+++ R++
Sbjct: 858 EPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVH 906
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 168/303 (55%), Gaps = 5/303 (1%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD + + ++++A +G + G+ + + D+ V N I MY+ G +
Sbjct: 6 IPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAV 65
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ F+RM+ +DVVSWT MI Y +++ ++ M EG+ P+ +T S+LS C
Sbjct: 66 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPS 125
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI-DKALEVFHQIPDKNVISWTSII 472
L+ G ++H L + + L S++++AN+L+ MYS+C+ D ++ F ++ ++V+SWT +I
Sbjct: 126 LLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMI 185
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
+ + ++ FR+M+L PNSVT VSILS C L G++IHA + +
Sbjct: 186 GAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLE 245
Query: 532 --FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
D + N ++MYV+CG + A F RDV +W +++ Y++ G+ +L+ + FR
Sbjct: 246 SHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFR 305
Query: 589 KMI 591
+M+
Sbjct: 306 EML 308
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 11/331 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E A+ +MQ + D+ +L+ C +G +HS ++++ + +
Sbjct: 600 EGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGL 659
Query: 137 LSMFVKFGDLGHAWYVF------GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
++M+ G L +A +F + RDLF W +I Y + G + +AL LY++M
Sbjct: 660 ITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMH-S 718
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+ D TF VL C + DL++G+ +H V+R G DV V N+++ MY KCG
Sbjct: 719 RQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDE 778
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +VF+ +D W A+I+ Y +G + L +F +R+ ++ +T +++SA
Sbjct: 779 ASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSH 838
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWT 368
VG + G E + ++G ++ + L+ + G+ E+ SRM + +V
Sbjct: 839 VGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTA 898
Query: 369 TMISC-YEGSVLPDKAV-ETYQMMEAEGSMP 397
+ +C G V + V E + ++ E P
Sbjct: 899 LLAACRVHGDVERARRVAEKLEALDPESEAP 929
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M+ G PD + I ++L+AC LG L+ G + T L I + N I+MY KC C
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
+D A++ F ++ ++V+SWT +I + + +L FR+M+L PNSVT VSILS
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSA 566
C L G++IHA + + + N+LL MY RC + + Q + RDV +
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVS 180
Query: 567 WNILLTGYAERGQGALAEEFFRKMI 591
W +++ Y++ G+ +L+ + FR+M+
Sbjct: 181 WTVMIGAYSQDGKFSLSIQLFREML 205
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +AL+ + M + D ++++ C +G +H+ V + V +
Sbjct: 703 HGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAV 762
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ K G A VF K +D+ W LI YA+ G ++AL +++R+ G
Sbjct: 763 ANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQ-DG 821
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ TF +L C V ++ G E + G E +++ + L+ + + G L A
Sbjct: 822 IELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAE 881
Query: 253 LVFDGMP 259
MP
Sbjct: 882 EFLSRMP 888
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 290/568 (51%), Gaps = 32/568 (5%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC-EWKRGYDEGLYLH 118
T + NS ++ NG E + Y M + DE +L ++ C K + G +H
Sbjct: 230 TTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVH 289
Query: 119 SVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
S V K + + N+ ++ + + G A VF +++L +WN +I G +
Sbjct: 290 SSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRV 349
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG--YEADVDVV 235
+EA+ ++Q M +PDV T ++ CG L GKEVH ++I+ G YE + V
Sbjct: 350 NEAMCMFQEM--RSKNQPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYE-ECSVG 406
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN---GEYMKGLMLFIMMREV 292
N+L+ +Y+KC D AR++F MP RD ISWN MISGY N GE K M + +
Sbjct: 407 NSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKA-----MFKGL 461
Query: 293 LVDPDFMTLSSVIS---ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
L + TLS+V++ + D G+ VH +++K GF VS N LI MY+ G
Sbjct: 462 LSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCG-- 519
Query: 350 EEGEKVFSRMES----KDVVSW-TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIA 403
+ FS +ES D++SW T ++ C + + D A+E +Q M + ++ PD IT+
Sbjct: 520 -DSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGD-ALEAFQFMHSTLTLNPDSITLV 577
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVLS C L LG +H +A++ + + + N L+ MY + + A +F + +
Sbjct: 578 SVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGR 637
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
N+ SW +I G NN AL F++KM +PN +++V I+ AC ++G L GK IH
Sbjct: 638 NLCSWNCMISGFAQNNEGLRALQFYKKMEY-FEPNEISIVGIICACTQLGDLRQGKNIHG 696
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGAL 582
H +R G+ + F+ +L+DMY +CGR+ + F S+ E+ ++ WN +++ + G G
Sbjct: 697 HVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLK 756
Query: 583 AEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
+ E F KM +S K + L C
Sbjct: 757 SIEIFWKMNNSGVKATRSTFIALLSACS 784
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 16/555 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L LN A+ M ++ D ++V ++ R + G+ H + K
Sbjct: 133 NAAISALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALK 192
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L N + M+ K GD + VF +M RD SWN ++ G G + +
Sbjct: 193 RRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYY 252
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVV-NALITM 241
++ M + D + CVL C + DL G+ VH VI+ GYE V N+LIT
Sbjct: 253 FKEMVR-SSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITF 311
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y + G A VF ++ ++WNAMI G EN + + +F MR PD TL
Sbjct: 312 YYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATL 370
Query: 302 SSVISASELVGDEKL---GREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
++ISA GD L G+EVHGY+IK G ++ SV N L+ +Y+ + +F
Sbjct: 371 VTIISA---CGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFR 427
Query: 358 RMESKDVVSWTTMISCYE-GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M +D++SW TMIS Y L ++A ++ + +EG T+ +V+ +C C +L+
Sbjct: 428 TMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLN 487
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGL 475
G +H ++ G ++ + AN+LI MY C A + I P ++ISW + I+G
Sbjct: 488 FGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGC 547
Query: 476 RLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N +AL F+ M L L P+S+TLVS+LS C + GK IH AL+ + F+
Sbjct: 548 VQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFN 607
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NALL MY R G + A F+S R++ +WN +++G+A+ +G A +F++KM
Sbjct: 608 LRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEY 667
Query: 593 SKGNWRKLMGLFRKC 607
+ N ++G+ C
Sbjct: 668 FEPNEISIVGIICAC 682
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 264/539 (48%), Gaps = 18/539 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVS 122
N+ + L N + +A+ M+ N D LV ++ C + EG +H ++
Sbjct: 337 NAMIKGLVENDRVNEAMCMFQEMRSKNQ-PDVATLVTIISACGDRGLLPEGKEVHGYIIK 395
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K + +GN+ L +++K D A +F M RDL SWN +I GY++ E
Sbjct: 396 KGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAK 455
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ G+ + T V+ +C DL GK VH ++++G+ V N+LI MY
Sbjct: 456 AMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMY 515
Query: 243 VKCGDLVRARLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMT 300
+ CGD + A + + + P D ISWN I G +NG Y L F M L ++PD +T
Sbjct: 516 ICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSIT 575
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L SV+S + + LG+ +H +K ++ V N L+ MY FG+ E E +FS +
Sbjct: 576 LVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLV 635
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+++ SW MIS + + +A++ Y+ ME P+EI+I ++ AC LG+L G
Sbjct: 636 GRNLCSWNCMISGFAQNNEGLRALQFYKKMEY--FEPNEISIVGIICACTQLGDLRQGKN 693
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H +R GL + + I+ +L+DMYSKC +D ++ VF +K++ W S+I +
Sbjct: 694 IHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGL 753
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN- 538
+++ F KM +K T +++LSAC+ G G + + + + G +P
Sbjct: 754 GLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYY----HLMIEHFGIIPTP 809
Query: 539 ----ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++DM R GR++ A S +++ W LL+ +++ + + E + ++
Sbjct: 810 EHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLL 868
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 229/484 (47%), Gaps = 15/484 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH K+ + L + + ++ + + D+ A VF + DL WN I
Sbjct: 85 LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ +A+ L++ M V GV D + +L L+ G H ++ + D+ + N
Sbjct: 145 YGDAVVLFRWMVDVLGVF-DSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWN 203
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ MY KCGD + +VF MP RD SWN+M+SG NG F M
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQA 263
Query: 297 DFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDV-SVCNPLIKMYLSFGNREEGEK 354
D ++LS V+SA + D G VH VIK+G+ D SV N LI Y G E E+
Sbjct: 264 DEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEE 323
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVET---YQMMEAEGSMPDEITIASVLSACAC 411
VF +K++V+W MI +G V D+ E +Q M ++ + PD T+ +++SAC
Sbjct: 324 VFLSTSNKNLVTWNAMI---KGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGD 379
Query: 412 LGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L G ++H ++ G I + N+L+D+Y KC A +F +P +++ISW +
Sbjct: 380 RGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNT 439
Query: 471 IILGLRLNNR-SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G N+ EA F+ ++ L T+V+++ +C L GK +H+ L+
Sbjct: 440 MISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKY 499
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEF 586
G N+L+ MY+ CG A++ S D+ +WN + G + G A E
Sbjct: 500 GFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEA 559
Query: 587 FRKM 590
F+ M
Sbjct: 560 FQFM 563
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 193/378 (51%), Gaps = 5/378 (1%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++ D V ++IT Y + D+ A VFD D I WNA IS N
Sbjct: 85 LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y ++LF M +VL D ++ ++S + + G HG +K D+S+ N
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNT 204
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G+ E VF RM +D SW +M+S + L + + ++ M D
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264
Query: 399 EITIASVLSACACLGNL-DLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEV 456
E++++ VLSAC+ L +L G +H ++ G + + N+LI Y + + A EV
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEV 324
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALM 516
F +KN+++W ++I GL N+R EA+ F++M +P+ TLV+I+SAC G L
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQPDVATLVTIISACGDRGLLP 384
Query: 517 CGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
GKE+H + ++ G ++ + N+LLD+Y++C A F + RD+ +WN +++GY
Sbjct: 385 EGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGY 444
Query: 575 AERGQ-GALAEEFFRKMI 591
+ G A+ F+ ++
Sbjct: 445 SRNDSLGEEAKAMFKGLL 462
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 280/549 (51%), Gaps = 9/549 (1%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG---LYLHSVVS 122
R +L N +L+ L S+ VD A L++ C RG G ++ H V S
Sbjct: 399 RRRDLAANAALQWLEDELTSLAFPWPGVDSYAYARLLQGCV-ARGDARGGRAVHGHVVRS 457
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ L + N L+M+ K G G A VF + +R++ S+ L+ G+A G F+EA +
Sbjct: 458 GGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASA 517
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+QR+ W G + + + VL+ + L VH + G++ + V +ALI Y
Sbjct: 518 LFQRLRWEGH-EVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAY 576
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
CG + AR VFDG+ +D ++W AM+S Y EN L +F MR + + L+
Sbjct: 577 SMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALT 636
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV+ A+ + LG+ +H +K + + V L+ MY GN E+ F + +
Sbjct: 637 SVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTND 696
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DV+ W+ MIS Y ++A E + M P+E +++SVL ACA + LDLG ++H
Sbjct: 697 DVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIH 756
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A++ G S + + N LID+Y+KC ++ +LE+F + D N +SW +II+G +
Sbjct: 757 NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGE 816
Query: 483 EALIFFRKMMLNLKPNS-VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
AL FR+M P++ VT S+L ACA ++ ++H + D + N+L+
Sbjct: 817 AALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLI 876
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWR 598
D Y +CG ++ A F + E D+ +WN +++GYA GQ A+A+E F M + K N
Sbjct: 877 DSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDI 936
Query: 599 KLMGLFRKC 607
+ L C
Sbjct: 937 TFVALLSVC 945
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 240/495 (48%), Gaps = 22/495 (4%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L ++ +L + +D L V C K G+D ++ G+A + +
Sbjct: 534 LTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFV---------------GSALIDAYSM 578
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G + A VF + +D +W ++ Y++ + L ++ +M V K + +
Sbjct: 579 CGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKM-RVAVSKLNPFALTS 637
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VLR + + GK +H ++ Y+ + V AL+ MY KCG++ ARL F+ + D
Sbjct: 638 VLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDD 697
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I W+ MIS Y + + + LFI M V P+ +LSSV+ A + LG+++H
Sbjct: 698 VILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHN 757
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ IK+G ++ V N LI +Y + E ++FS + + VSW T+I Y S +
Sbjct: 758 HAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEA 817
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ ++ M A ++T +SVL ACA +++ ++H L ++ S I++N+LID
Sbjct: 818 ALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLID 877
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
Y+KC CI A E+F + + +++SW +II G ++ ++ A F M N +K N +T
Sbjct: 878 SYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDIT 937
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNS 559
V++LS C G + G + ++R+ + + + ++ + R GR+ A N
Sbjct: 938 FVALLSVCGSTGLVSQGLSLF-DSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGD 996
Query: 560 NERDVSA--WNILLT 572
SA W LL+
Sbjct: 997 IPSAPSAMVWRALLS 1011
>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
Length = 730
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 256/480 (53%), Gaps = 13/480 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS +++T LGN + M+ K G+L A F + ++++FSW+++IG Y++
Sbjct: 3 IHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRHRL 62
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA+ L+ M V+P+ TF L C L+ GK++H ++ E ++++ N
Sbjct: 63 SREAIELFHAM----DVRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLAN 118
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI+MY CG LV A+ FDGM +R+ +SWN +I+ + +G Y + + LF M + P
Sbjct: 119 SLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKP 178
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D ++ SV SA ++ D GR +H DVS+ N L+ MY G+ ++ VF
Sbjct: 179 DRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVF 238
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ S+++VSWT+MI+ Y D+ + Y++ + G P+E+T ++L ACA L
Sbjct: 239 DSITSRNIVSWTSMIAAY---AQFDRFHDAYEVFQKMGVAPNEVTFITILGACAEARALK 295
Query: 417 LGIKLHQLAMRTGLI--SYIIIANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSII 472
++H L + +G++ + + N LI+ Y+KC + A VF + ++NV++WTSII
Sbjct: 296 QAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSII 355
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
L EAL F +M L P N +T ++LSACA +G+ + +H + G
Sbjct: 356 AACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYD 415
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + N L++M+ +CG ++ A F R++ W +L Y ++ + A F++M
Sbjct: 416 RDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQM 475
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 256/555 (46%), Gaps = 49/555 (8%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ +M CV +N + C + G +H+ + L + L N+ +
Sbjct: 65 EAIELFHAMDVRPNCV---TFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLANSLI 121
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
SM+ G L A F M R++ SWN +I ++ G + EA+ L+ M G KPD
Sbjct: 122 SMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEME-KQGFKPDR 180
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F V C + DL +G+ +H + DV + N L+ MY +CG L ARLVFD
Sbjct: 181 VSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDS 240
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ R+ +SW +MI+ Y + + +F M V P+ +T +++ A K
Sbjct: 241 ITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKMG---VAPNEVTFITILGACAEARALKQA 297
Query: 318 REVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISC 373
RE+H V+ G ++V N LI Y G+ + + VF M + ++VV+WT++I+
Sbjct: 298 REIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAA 357
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
P +A+ + ME EG +EIT +VLSACA LG+ LH L + G
Sbjct: 358 CGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYDRD 417
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF----------- 482
++ N LI+M+ KC ++ A +F ++ +N+++WT +LG + +
Sbjct: 418 TVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTG-MLGAYIQQQEIRQAVSLFQQME 476
Query: 483 ------------------------EALIFFRKMML-NLKPNSVTLVSILSACARIGALMC 517
EAL + +M L + P+ +T V++L AC+R+GA
Sbjct: 477 RISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKKE 536
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAE 576
G I +H L G+ L N L+ Y CG A F N ERD +AWN + +
Sbjct: 537 GWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQ 596
Query: 577 RGQGALAEEFFRKMI 591
G + F +M+
Sbjct: 597 HGFYDESLRLFERMV 611
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 244/547 (44%), Gaps = 54/547 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +A+ M++ D + V++ C +G +H+ L V +
Sbjct: 158 HGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSI 217
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN L+M+ + G L A VF + R++ SW +I YA+ F +A ++Q+M G
Sbjct: 218 GNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM----G 273
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLVR 250
V P+ TF +L C LK+ +E+H V+ G + + V N LI Y KCG L
Sbjct: 274 VAPNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSD 333
Query: 251 ARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+ VF+ M +R ++W ++I+ G + L LF M + + +T +V+SA
Sbjct: 334 AKTVFESMATAERNVVTWTSIIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSAC 393
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES------- 361
+G + R +HG ++ G+ D VCN LI M+ G E+ +F RM S
Sbjct: 394 ADLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWT 453
Query: 362 ---------------------------KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
KDV++WTTM++ Y + D+A++ Y M EG
Sbjct: 454 GMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEG 513
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PDEIT ++L AC+ +G G + + GL S ++ N L+ Y C +A
Sbjct: 514 VAPDEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAK 573
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
VF + +++ +W + I + E+L F +M+L ++P+ +T ++L +C+ G
Sbjct: 574 MVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSG 633
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWN--QFNSNERDVSA 566
+ E + G PN L D++ R G + A F R A
Sbjct: 634 EI----ERAWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGWIDEAERLVSFLPRTRASIA 689
Query: 567 WNILLTG 573
W LL+G
Sbjct: 690 WTTLLSG 696
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 195/379 (51%), Gaps = 10/379 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H + R G +++ + N L+ MY KCG+L AR FDG+ +++ SW+ +I Y +
Sbjct: 1 RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + LF M V P+ +T + + A + G+++H ++ ++++
Sbjct: 61 RLSREAIELFHAMD---VRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLA 117
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI MY + G+ + ++ F M ++VVSW +I+ + G +AV+ + ME +G
Sbjct: 118 NSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFK 177
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD ++ SV SAC+ L +L G ++H + + I NTL++MY++C +D A V
Sbjct: 178 PDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLV 237
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALM 516
F I +N++SWTS+I +R +A F+KM + PN VT ++IL ACA AL
Sbjct: 238 FDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM--GVAPNEVTFITILGACAEARALK 295
Query: 517 CGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILL 571
+EIH+ L G+ L N L++ Y +CG + A F S ER+V W ++
Sbjct: 296 QAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSII 355
Query: 572 TGYAERGQGALAEEFFRKM 590
G A F +M
Sbjct: 356 AACGLCGHPREALALFHRM 374
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ALK M + DE VNL+ C EG + S + + S LG
Sbjct: 497 GYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLG 556
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + G A VF + +RD +WN IG + GF+DE+L L++RM + G+
Sbjct: 557 NGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMV-LEGM 615
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRA 251
+PD TF VL +C +++R + V+R G E +V+ L ++ + G + A
Sbjct: 616 EPDEITFTNVLFSCSHSGEIERAWRWFL-VMRGDHGMEPNVEHWGCLADLFGRLGWIDEA 674
Query: 252 RLVFDGMPK-RDRISWNAMISGYFENGE 278
+ +P+ R I+W ++SG +G+
Sbjct: 675 ERLVSFLPRTRASIAWTTLLSGCKVHGD 702
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 269/508 (52%), Gaps = 11/508 (2%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L+ L+R C + +G +H V + L ++ ++ HA V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 153 FGKM---CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
F M C+ L WN L+ GY K + EAL L++++ +KPD YT+P V + CGG
Sbjct: 61 FDNMENPCEISL--WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGG 118
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ GK +H +I+ G D+ V ++L+ MY KC +A +F+ MP++D WN +
Sbjct: 119 LHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTV 178
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
IS Y+++G + L F +MR +P+ +T+++ IS+ + D G E+H +I GF
Sbjct: 179 ISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETY 387
D + + L+ MY G+ E ++F +M K VV+W +MIS Y +G ++ ++ +
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDII--SCIQLF 296
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+ M EG P T++S++ C+ L G +H +R + + + ++L+D+Y KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC 356
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
++ A ++F IP V+SW +I G + FEAL F +M + ++ +++T S+L
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
+AC+++ AL GKEIH + + + + ALLDMY +CG + A++ F +RD+
Sbjct: 417 TACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDS 593
+W ++T Y G A E F +M+ S
Sbjct: 477 SWTSMITAYGSHGHAYGALELFAEMLQS 504
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 253/506 (50%), Gaps = 22/506 (4%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++ + C Y G +H+ + KT + + +G++ + M+ K A ++F +M ++
Sbjct: 111 SVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEK 170
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLY--QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D+ WN +I Y ++G F +AL + R F G +P+ T + +C + DL RG
Sbjct: 171 DVACWNTVISCYYQSGNFKDALEYFGLMRRF---GFEPNSVTITTAISSCARLLDLNRGM 227
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
E+H +I G+ D + +AL+ MY KCG L A +F+ MPK+ ++WN+MISGY G
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKG 287
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + + LF M V P TLSS+I G+ VHGY I+ DV V +
Sbjct: 288 DIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNS 347
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMMEAEGS 395
L+ +Y G E EK+F + VVSW MIS Y EG + +A+ + M
Sbjct: 348 SLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF--EALGLFSEMRKSYV 405
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D IT SVL+AC+ L L+ G ++H L + L + ++ L+DMY+KC +D+A
Sbjct: 406 ESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGA 514
VF +P ++++SWTS+I + ++ AL F +M+ N+KP+ V ++ILSAC G
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGL 525
Query: 515 LMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSNER---DVSA 566
+ G + + G +P + L+D+ R GR+ A+ N DV
Sbjct: 526 VDEG----CYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVEL 581
Query: 567 WNILLTGYAERGQGALAEEFFRKMID 592
+ L + L E R +ID
Sbjct: 582 LSTLFSACRLHRNIDLGAEIARTLID 607
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 196/392 (50%), Gaps = 4/392 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ + AL+Y M+ + + + C + G+ +H + + L +
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G L A +F +M + + +WN +I GY G + L++RM+ G
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY-NEG 303
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + T ++ C L GK VH + IR + DV V ++L+ +Y KCG + A
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAE 363
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELV 311
+F +PK +SWN MISGY G+ + L LF MR+ V+ D +T +SV++A S+L
Sbjct: 364 KIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLA 423
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
EK G+E+H +I+ ++ V L+ MY G +E VF + +D+VSWT+MI
Sbjct: 424 ALEK-GKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGL 430
+ Y A+E + M PD + ++LSAC G +D G +Q+ G+
Sbjct: 483 TAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGI 542
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
I + + LID+ + + +A E+ Q P+
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPE 574
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G + ++ M + L +L+ +C EG ++H +
Sbjct: 277 NSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + ++ + ++ K G + A +F + + SWNV+I GY G EAL L
Sbjct: 337 NRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGL 396
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V+ D TF VL C + L++GKE+H +I + + V+ AL+ MY
Sbjct: 397 FSEM-RKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYA 455
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF +PKRD +SW +MI+ Y +G L LF M + V PD + +
Sbjct: 456 KCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLA 515
Query: 304 VISASELVG 312
++SA G
Sbjct: 516 ILSACGHAG 524
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 256/465 (55%), Gaps = 4/465 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+R LS + GDL A V + D +++ V +G +A AG EA+++++ M
Sbjct: 60 LRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRR 119
Query: 190 -VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ DV L+ D G+ +H V++ G D+ V+N L+ MY K GDL
Sbjct: 120 RCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDL 178
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD +P R+ +SW +M+SG +NG +GL+LF MR+ + P T++SV+ A
Sbjct: 179 KNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMAC 238
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
++G GR +HG V+K G + + ++ MY+ G E+ +VF + D+V WT
Sbjct: 239 TMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWT 298
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TMI Y + P A+ + + +P+ +TIA+VLSA A L NL LG +H ++++
Sbjct: 299 TMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKL 358
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + ++ N L+DMY+KCK + A +F ++ +K+V++W S+I G N+ +AL+ F
Sbjct: 359 GAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLF 418
Query: 489 RKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + P+++++V+ LSAC +G L+ GK H +A++ + ++ ALL++Y +C
Sbjct: 419 SHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKC 478
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ A F+ N+R+ W ++ GY +G A + + F +M+
Sbjct: 479 ADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEML 523
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 247/464 (53%), Gaps = 9/464 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + M+ K GDL +A VF ++ DR++ SW ++ G + G E L L+ M +
Sbjct: 166 NNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQ-ESI 224
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P YT VL C + L +G+ +H V++ G ++ + A++ MYVKCG+ AR
Sbjct: 225 LPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQ 284
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + D + W MI GY +NG + L+LF+ + + + P+ +T+++V+SAS + +
Sbjct: 285 VFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRN 344
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR +HG +K+G ++ V N L+ MY + + +F R+ +KDVV+W ++I+
Sbjct: 345 LSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAG 404
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + A+ + M +GS+PD I++ + LSAC CLG+L +G H A++ +S
Sbjct: 405 YAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSN 464
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + L+++Y+KC + A VF ++ D+N ++W ++I G + S ++ F +M+
Sbjct: 465 IYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLK 524
Query: 494 -NLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
N++PN SILS C+ G + GK E AH I + + ++D+ R G
Sbjct: 525 DNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHY--ACMVDVLARAGN 582
Query: 550 MKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A Q + D S W L G + AEE +M+
Sbjct: 583 LEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMM 626
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 3/198 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
AL M+ D ++VN + C G H+ K ++ + A
Sbjct: 412 SDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTAL 471
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L+++ K DL A VF +M DR+ +W +IGGY G ++ L+ M ++P+
Sbjct: 472 LNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEML-KDNIQPN 530
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVF 255
F +L TC + GK+ + F + ++ + + G+L A
Sbjct: 531 EAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFI 590
Query: 256 DGMP-KRDRISWNAMISG 272
MP + D W A + G
Sbjct: 591 QKMPMQADTSIWQAFLHG 608
>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
Length = 947
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 278/531 (52%), Gaps = 18/531 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A++ L M + +E V+++ W+ +EG +L S + ++ +V +
Sbjct: 308 NGYFWEAIRQLQKMDLEGVQANEVTFVSILDASVWEE-IEEGEFLRSRIIESGYGSNVAV 366
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N+ ++M+ K LG+A VF M +R + SW+ L+ YA+ EA+ L+Q M +
Sbjct: 367 CNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMD-LE 425
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL---ITMYVKCGDL 248
G+KPD T VL CG + K+ ++H V+ G E DV V NAL + MY +C L
Sbjct: 426 GLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSL 485
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD------PDFMTLS 302
AR VF GM ++D I WN++++ Y ++G + L +F RE+ ++ P+ +T
Sbjct: 486 EDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIF---REMDLEGCKSMKPNDVTFV 542
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
S I A D G H ++G +V V N LIKMY EE VF+R+
Sbjct: 543 STIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGI 602
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+VSW +IS + + +A+ETY M EG PD IT SVL ACA LG++ G ++
Sbjct: 603 RDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREI 662
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H+ A G S + TL++MY +C +A F ++ ++ I+W ++ +
Sbjct: 663 HRQASEGGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAITQTGDQ 722
Query: 482 FEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
AL R M +KP++VT +++L CA AL+ GK HA A+ +G FD L NAL
Sbjct: 723 RRALGILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNAL 782
Query: 541 LDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
L+MY +CG ++ A F + R+ +WN L+ YA+ G LA FR M
Sbjct: 783 LNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDM 833
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 251/464 (54%), Gaps = 12/464 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++M+ K G L A + +M D ++FSW +++ YA+ G D+AL + +M + GV
Sbjct: 68 NLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKME-LEGV 126
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRAR 252
+ + T L C RG+ H + + G+ DV + NAL+++Y +C ++ +AR
Sbjct: 127 RANRVTIISALGCC---KSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQAR 183
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D +SW AMIS + +NG + ++ F M+ V P +T +++ A
Sbjct: 184 SVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETR 243
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D ++ E+H +I+ G D + N L++ Y G+ E+ ++ F +++ K+VVSW+ I+
Sbjct: 244 DARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIA 303
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + +A+ Q M+ EG +E+T S+L A + ++ G L + +G S
Sbjct: 304 AFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGS 362
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N+L++MY KC + A EVF + + KN ISW+S++ NN++ EA+ F+ M
Sbjct: 363 NVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHM 422
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN---ALLDMYVRC 547
L LKP+ VTL+S+L AC + A +IHA L G+ D + N ALL+MY RC
Sbjct: 423 DLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARC 482
Query: 548 GRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F +D WN LL YA+ G G A + FR+M
Sbjct: 483 HSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREM 526
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 278/533 (52%), Gaps = 22/533 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT-MSHLSVR 131
NG L+ AL+ M+ + + +++ + C + + G + HS + + V
Sbjct: 108 NGHLDDALECFWKMELEGVRANRVTIISALGCC---KSFSRGQWFHSRIKQEGFLPDDVM 164
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA +S++ + ++ A VF ++C++DL SW +I + + G D A+ + M
Sbjct: 165 IQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSM-QAD 223
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVKP TF +L D + +E+H+ +I G E D ++N L+ Y KCGD+ +
Sbjct: 224 GVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKM 283
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ F+ + +++ +SW+ I+ + +NG + + + M V + +T S++ AS
Sbjct: 284 KESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDASVWE 343
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY---LSFGNREEGEKVFSRMES-KDVVSW 367
E+ G + +I+ G+ +V+VCN L+ MY S GN +E VF ME K+ +SW
Sbjct: 344 EIEE-GEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKE---VFWSMEERKNEISW 399
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+++++ Y + +A++ +Q M+ EG PD +T+ SVL AC L ++H +
Sbjct: 400 SSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLE 459
Query: 428 TGLISYIIIAN---TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
GL +++AN L++MY++C ++ A +VF + K+ I W S++ + EA
Sbjct: 460 AGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEA 519
Query: 485 LIFFRKMML----NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
L FR+M L ++KPN VT VS + ACA L G H A +G+ + + N+L
Sbjct: 520 LQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSL 579
Query: 541 LDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ MY +C R++ A + FN RD+ +WN L++ +A+ G G A E + MI
Sbjct: 580 IKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMI 632
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 239/513 (46%), Gaps = 18/513 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A+K M + D L++++ C R + +H+ V + V +
Sbjct: 409 NNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVV 468
Query: 133 GNAF---LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
NA L+M+ + L A VF MC +D WN L+ YA++G EAL +++ M
Sbjct: 469 ANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDL 528
Query: 190 VG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G +KP+ TF + C DL G H G +++V V N+LI MY KC
Sbjct: 529 EGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKR 588
Query: 248 LVRARLVFDG-MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
L A VF+ + RD +SWNA+IS + +NG+ + L + M V PD +T SV+
Sbjct: 589 LEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLD 648
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A +G GRE+H + GF +V L+ MY GN E E F +++ +D ++
Sbjct: 649 ACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQQRDAIA 708
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W + + + +A+ + M+ EG PD +T ++L CA L G H AM
Sbjct: 709 WNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAM 768
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G II+ N L++MY KC + +A VF +P +N +SW ++I+ N A+
Sbjct: 769 ELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIG 828
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----AL 540
FR M L + PN V+ +SI AC+ G L G + + VA G +P
Sbjct: 829 LFRDMDLEGIVPNQVSFLSIFFACSHAGMLEEGSKYFQYM----VADHGLVPTPEHYGCF 884
Query: 541 LDMYVRCGRMKPAWNQFNSNERDVSA--WNILL 571
+D+ R GR+ A D + W ILL
Sbjct: 885 VDLLGRTGRLADAEELVTGMAEDARSLDWLILL 917
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 194/396 (48%), Gaps = 8/396 (2%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T+ +L C + L+ GK +H H + G + V N LI MY KCG L AR + D M
Sbjct: 31 TYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDRM 90
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+ SW M++ Y +NG L F M V + +T +ISA G+
Sbjct: 91 EDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVT---IISALGCCKSFSRGQ 147
Query: 319 EVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
H + + GF DDV + N L+ +Y ++ VF + +KD+VSWT MIS + +
Sbjct: 148 WFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQN 207
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
PD+A+ + M+A+G P +T ++L A + + ++H + TGL +
Sbjct: 208 GHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLL 267
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N L+ Y KC ++K E F ++ +KNV+SW+ I N +EA+ +KM L ++
Sbjct: 268 NLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQ 327
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT VSIL A + G+ + + + G + + N+L++MY +C + A
Sbjct: 328 ANEVTFVSILDASV-WEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEV 386
Query: 557 FNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F S E ++ +W+ L+ YA+ Q A + F+ M
Sbjct: 387 FWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHM 422
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++AVE + + + + T A +L C LG L+ G ++H+ ++ G+ + N L
Sbjct: 14 EQAVEDLEQHQRDANPS---TYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLL 70
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
I+MY KC +++A ++ ++ D NV SWT ++ N +AL F KM L ++ N
Sbjct: 71 INMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANR 130
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP------NALLDMYVRCGRMKPA 553
VT++S L C G+ H+ + +GFLP NAL+ +Y RC + A
Sbjct: 131 VTIISALGCCKSFSR---GQWFHSR-----IKQEGFLPDDVMIQNALVSLYGRCCEVDQA 182
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQ 579
+ F+ +D+ +W +++ + + G
Sbjct: 183 RSVFDEICNKDLVSWTAMISAFVQNGH 209
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/575 (27%), Positives = 294/575 (51%), Gaps = 11/575 (1%)
Query: 19 RNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQ 78
R+P R + Y K + ++ K L+ + SS+ L+ NG +E+
Sbjct: 14 RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSL--------LSGYVQNGFVEE 65
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL + M L + +E ++++ C KR + G +H + T + N +
Sbjct: 66 ALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVV 125
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L + +FG + +R++ SWN L Y ++ EA+ L++ M G+ P+ +
Sbjct: 126 MYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVR-SGIMPNEF 184
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+ +L C G+ + G+++H +++ G + D NAL+ MY K G++ A VF +
Sbjct: 185 SISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDI 244
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D +SWNA+I+G + LML M+ P+ TLSS + A +G ++LGR
Sbjct: 245 AHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR 304
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +IKM D+ L+ MY ++ + + M KD+++W +IS Y
Sbjct: 305 QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCG 364
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
AV + M +E ++ T+++VL + A L + + ++H +++++G+ S + N
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
+L+D Y KC ID+A ++F + ++++++TS+I EAL + +M ++KP
Sbjct: 425 SLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKP 484
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ S+L+ACA + A GK++H HA++ G D F N+L++MY +CG ++ A F
Sbjct: 485 DPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAF 544
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ R + +W+ ++ GYA+ G G A F +M+
Sbjct: 545 SEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQML 579
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 254/467 (54%), Gaps = 9/467 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++++ K G+A + + + D+ SW+ L+ GY + GF +EAL ++ M +G
Sbjct: 18 LRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLG 77
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
VK + +TFP VL+ C DL G++VH + G+E+D V N L+ MY KCG L +
Sbjct: 78 -VKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDS 136
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F G+ +R+ +SWNA+ S Y ++ + + LF M + P+ ++S +++A +
Sbjct: 137 RRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGL 196
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ LGR++HG ++KMG D N L+ MY G E VF + DVVSW +I
Sbjct: 197 QEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAII 256
Query: 372 SCYEGSVLP---DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ G VL D A+ M+ G+ P+ T++S L ACA +G +LG +LH ++
Sbjct: 257 A---GCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKM 313
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
S + A L+DMYSKC+ +D A + +P K++I+W ++I G +A+ F
Sbjct: 314 DAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLF 373
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
KM ++ N TL ++L + A + A+ K+IH +++ G+ D ++ N+LLD Y +C
Sbjct: 374 SKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKC 433
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A F D+ A+ ++T Y++ G G A + + +M D+
Sbjct: 434 NHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 211/375 (56%), Gaps = 2/375 (0%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
E+H H+I+FG+ D + N L+T+Y KC AR + D + D +SW++++SGY +NG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L++F M + V + T SV+ A + D +GR+VHG + GF D V N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G ++ ++F + ++VVSW + SCY S L +AV ++ M G MP
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+E +I+ +L+ACA L DLG K+H L ++ GL AN L+DMYSK I+ A+ VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
I +V+SW +II G L++ + AL+ +M +PN TL S L ACA +G
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+++H+ +++ D F L+DMY +C M A ++S ++D+ AWN L++GY+
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361
Query: 576 ERGQGALAEEFFRKM 590
+ G A F KM
Sbjct: 362 QCGDHLDAVSLFSKM 376
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 261/512 (50%), Gaps = 18/512 (3%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
+ELC +A+ M I +E ++ ++ C + D G +H ++ K
Sbjct: 161 SELC-----GEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLD 215
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
L NA + M+ K G++ A VF + D+ SWN +I G D AL L M
Sbjct: 216 LDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM 275
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G +P+++T L+ C + + G+++H +I+ +D+ L+ MY KC
Sbjct: 276 KG-SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM 334
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR +D MPK+D I+WNA+ISGY + G+++ + LF M +D + TLS+V+ +
Sbjct: 335 MDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKS 394
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ K+ +++H IK G D V N L+ Y + +E K+F +D+V++
Sbjct: 395 VASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAY 454
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+MI+ Y ++A++ Y M+ PD +S+L+ACA L + G +LH A++
Sbjct: 455 TSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK 514
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + I +N+L++MY+KC I+ A F +IP++ ++SW+++I G + EAL
Sbjct: 515 FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRL 574
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
F +M+ + + PN +TLVS+L AC G + GK+ + ++ V F G P ++
Sbjct: 575 FNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQ---YFEKMEVMF-GIKPTQEHYACMI 630
Query: 542 DMYVRCGRMKPAWNQFNS--NERDVSAWNILL 571
D+ R G++ A NS E D W LL
Sbjct: 631 DLLGRSGKLNEAVELVNSIPFEADGFVWGALL 662
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++LH ++ G + N L+ +YSKC+ A ++ + + +V+SW+S++ G N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 479 NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EAL+ F +M +L +K N T S+L AC+ L G+++H A+ G DGF+
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
N L+ MY +CG + + F ER+V +WN L + Y + A F++M+ S
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRS 177
>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
Length = 682
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 245/464 (52%), Gaps = 17/464 (3%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDV 197
MF K GD+ A +F + +LFSW +++ A+ G EAL L +RM +G G +PDV
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRM--IGEGARPDV 58
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALITMYVKCGDLVRARLVFD 256
F +L C DL++GK H ++ G E+ V+ NALI MY KC +L AR FD
Sbjct: 59 VCFVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFD 118
Query: 257 GMPK----RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
M RD ++WN++++ + NG + LF M + P +TL+ V+ + G
Sbjct: 119 RMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--G 176
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ H V+ +G D + N L+KMY G EE VF ++ KD++SW MIS
Sbjct: 177 DRQ-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMIS 235
Query: 373 CYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
++AVE + ++ EG PDE+T SV+ AC+CLG+LDL + +L G
Sbjct: 236 LEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFD 295
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ N +++M+ K C+D A F ++P KNV+SW +I G N + L FR+M
Sbjct: 296 DDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQM 355
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+K NSVT VS+L AC+ I AL G+E+H G+ + AL++MY +C +
Sbjct: 356 DQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQEL 415
Query: 551 KPAWNQF----NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A ++ RD WN + YA+ G A E F +M
Sbjct: 416 QLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRM 459
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/563 (27%), Positives = 254/563 (45%), Gaps = 34/563 (6%)
Query: 35 KTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVD 94
K R+ AQ ++ + + + T N S L NG LE+A + M+ I
Sbjct: 106 KCRNLDLARAQFDRMEHQDHGRDVVTWN--SLLAAFTHNGYLEEAARLFQEMEVEGIKPS 163
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
L ++ C R +G H V L N+ + M+ + G L + VF
Sbjct: 164 SVTLTCVLESCSGDR---QGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFR 220
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ +D+ SWNV+I A+ G +EA+ L + + G +PD TF V+ C + DL
Sbjct: 221 AIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLD 280
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+ V G++ D+ + NA++ M+ K G L AR FD +P ++ +SWN +ISGY
Sbjct: 281 LCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYA 340
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+N + + L LF M + V + +T S++ A + GRE+H + G
Sbjct: 341 QNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTV 400
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMES---KDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V LI MY + +++ R +S +D V+W + + Y + P +A+E + M+
Sbjct: 401 VATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQ 460
Query: 392 AEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+G E T ++L AC + L G + +L+ T I L+ MYSKC C+
Sbjct: 461 QQGVRAQEATFVTILDACGDSSSLLAHGRSIAKLSSWTS----DAIKGALLGMYSKCGCV 516
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
D AL + + +++WTS++ R+ EAL +M + + P+ V +++ AC
Sbjct: 517 DDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFAC 576
Query: 510 ARIGALMCGKEIHAHALRI-------GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--N 560
+ G L H +R+ G A L ++D+ R GR++ A ++
Sbjct: 577 SHAGLL------HEALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPY 630
Query: 561 ERDVSAWNILLT-----GYAERG 578
E D AW LL G ERG
Sbjct: 631 EPDSLAWMALLGACTVHGDLERG 653
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 14/364 (3%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
M+ KCGD+ AR +F G+ + + SW +++ NG ++ L+L M PD +
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC-NPLIKMYLSFGNREEGEKVFSRM 359
+++ D + G+ H +++ G V N LI MY N + F RM
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 360 E----SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
E +DVV+W ++++ + + ++A +Q ME EG P +T+ VL +C+ G+
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII-LG 474
G H + GL + N+L+ MY++C ++++ VF I K++ISW +I L
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237
Query: 475 LRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
RL + S EA+ R++ L +P+ VT +S++ AC+ +G L I G
Sbjct: 238 ARLGS-SEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDD 296
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D L NA+++M+ + G + A F+ ++V +WN L++GYA+ QG E FR+M
Sbjct: 297 DLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQM- 355
Query: 592 DSKG 595
D +G
Sbjct: 356 DQEG 359
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 259/469 (55%), Gaps = 21/469 (4%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
+ L++L++ C+ K L + M S+ N LS + DL +A VF +
Sbjct: 34 EKLLSLIKQCKSKN-------LLKQIHAQMLINSIPKPNFLLSKIIDLKDLAYASLVFNQ 86
Query: 156 MCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ +++++NV++ G A +D + LY ++ +G +K + +T+P + CG V L
Sbjct: 87 LTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLG-LKANNFTYPFLFIACGNVRGLV 145
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
GK H V + G + D V ++LITMY +CG++ AR VFD M RD +SWN+MISGY
Sbjct: 146 HGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYS 205
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ G + + LF+ MRE +PD MTL SV+ A +GD LGR V G+V++ +
Sbjct: 206 KMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSY 265
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ + LI MY G+ +VF M +KDVV+W +I+ Y + ++A+ + M G
Sbjct: 266 MGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAG 325
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD +T+ VLSAC+ +G LDLG + A GL + +A+ LIDMY+KC +D A+
Sbjct: 326 PHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAV 385
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACAR 511
VF +P KN +SW ++I L + ++ EAL FR+M + ++PN +T + +LSAC
Sbjct: 386 RVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVH 445
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWN 555
G + G+++ + ++F G +P + ++D+ R G + AW+
Sbjct: 446 AGLVDEGRQLFE---SMNLSF-GLVPKVEHYSCMVDLCARAGLLYEAWD 490
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 3/363 (0%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLV 294
N L++ + DL A LVF+ + K + ++N M+ G +Y + L+ ++ + +
Sbjct: 65 NFLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGL 124
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ T + A V G+ H V K G D V + LI MY G K
Sbjct: 125 KANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARK 184
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M +D+VSW +MIS Y +A+ + M EG PDE+T+ SVL AC LG+
Sbjct: 185 VFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGD 244
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG + + + + + LIDMY KC + A VF +P+K+V++W +II G
Sbjct: 245 LGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITG 304
Query: 475 LRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N S EA++ F M P+ VT++ +LSAC+ IGAL GK + HA G+ D
Sbjct: 305 YAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHD 364
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ +AL+DMY +CG + A F S ++ +WN +++ A GQ A FR+M
Sbjct: 365 VYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSK 424
Query: 593 SKG 595
G
Sbjct: 425 DNG 427
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG+ +A+ + M+E D ++ ++ C D G ++ + S+
Sbjct: 299 NAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASE 358
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + +A + M+ K G L A VF M ++ SWN +I A G EALSL
Sbjct: 359 KGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSL 418
Query: 184 YQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITM 241
++RM G V+P+ TF VL C + G+++ + + FG V+ + ++ +
Sbjct: 419 FRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDL 478
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMI 270
+ G L A + MP K D I +++
Sbjct: 479 CARAGLLYEAWDLIKKMPGKPDEIVLGSLL 508
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/478 (33%), Positives = 244/478 (51%), Gaps = 4/478 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L VK G L + Y+F KM RD SW LI GY A EAL L+ M+ G+
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + L+ CG ++ G+ +H ++ G V V +ALI MY+K G + +
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M KR+ +SW A+I+G G M+ L+ F M V D T + + AS
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H IK GF + V N L MY G + ++F +M+ DVVSWTT+I+
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITT 333
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + AVE ++ M P++ T A+V+SACA L G ++H +R GL+
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDA 393
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN+++ +YSK + A VFH I K++ISW++II + EA + M
Sbjct: 394 LSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRR 453
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
KPN L S+LS C + L GK++HAH L IG+ + + +AL+ MY +CG ++
Sbjct: 454 EGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEE 513
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A FN + ++ +W ++ GYAE G A F K+ + K ++ +G+ C
Sbjct: 514 ASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTAC 571
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 253/502 (50%), Gaps = 15/502 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH K+ SV + +A + M++K G + VF KM R++ SW +I G
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVH 235
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ EAL LY W+ V D +TF L+ L GK +H I+ G++
Sbjct: 236 AGYNMEAL-LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 294
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V+N L TMY KCG +F+ M D +SW +I+ Y + GE + F MR+
Sbjct: 295 VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSN 354
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T ++VISA + K G ++HG+V+++G D +SV N ++ +Y G +
Sbjct: 355 VSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSAS 414
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF + KD++SW+T+I+ Y +A + M EG P+E ++SVLS C +
Sbjct: 415 LVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMA 474
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G ++H + G+ ++ + LI MYSKC +++A ++F+ + N+ISWT++I
Sbjct: 475 LLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMIN 534
Query: 474 GLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIG 529
G + S EA+ F K+ + LKP+ VT + +L+AC+ G + G + + +I
Sbjct: 535 GYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQIS 594
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLT-----GYAERGQGAL 582
+ + + ++D+ R GR+ A + S D W+ LL G +RG+
Sbjct: 595 PSKEHY--GCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWT- 651
Query: 583 AEEFFRKMIDSKGNWRKLMGLF 604
AE+ R +S G L ++
Sbjct: 652 AEQLLRLDPNSAGTHIALANIY 673
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 180/359 (50%), Gaps = 12/359 (3%)
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+N+ + VK G L ++R +FD M RD ISW +I+GY + + L+LF M V
Sbjct: 93 LNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM---WV 149
Query: 295 DP----DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
P D +S + A L + G +HG+ +K G + V V + LI MY+ G E
Sbjct: 150 QPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIE 209
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+G +VF +M ++VVSWT +I+ + +A+ + M D T A L A A
Sbjct: 210 QGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASA 269
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L G +H ++ G + NTL MY+KC D + +F ++ +V+SWT+
Sbjct: 270 DSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTT 329
Query: 471 IILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I A+ F++M N+ PN T +++SACA + G++IH H LR+G
Sbjct: 330 LITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
+ + N+++ +Y + G +K A F+ +D+ +W+ ++ Y+ QG A+E F
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYS---QGGYAKEAF 445
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
K QLA + ++ N+ + K + K+ +F ++ ++ ISWT++I G +
Sbjct: 76 KQEQLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNAS 135
Query: 480 RSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFL 536
S+EALI F M + L+ + + L AC +G +C G+ +H +++ G+ F+
Sbjct: 136 DSYEALILFSNMWVQPGLQRDQFMISVALKACG-LGVNICFGELLHGFSVKSGLINSVFV 194
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+AL+DMY++ G+++ F +R+V +W ++ G G A +F +M SK
Sbjct: 195 SSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISK 253
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 265/504 (52%), Gaps = 7/504 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L ++++ C + G +H + K S + NA + M+ K G L A VF
Sbjct: 163 DGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVF 222
Query: 154 G--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+ RD+ SWN ++ G + G EAL+L++ M G + YT VL+ C +
Sbjct: 223 EWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGM-QSAGFPMNSYTSVAVLQVCAELG 281
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
L G+E+H +++ G E ++ NAL+ MY K G + A VF + ++D ISWN+M+S
Sbjct: 282 LLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLS 340
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y +N Y + + F M + PD + S+ SA + GRE H Y IK
Sbjct: 341 CYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHT 400
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ V N L+ MY+ G+ E KVF M +D +SWTT+++C+ S +A+E ++
Sbjct: 401 DLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQ 460
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG M D + I S+L C L ++ L ++H A+R GL+ +I+ N LID+Y +C D
Sbjct: 461 KEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLD-LILENRLIDIYGECGEFD 519
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
+L +F ++ K+++SWTS+I N R A+ F +M N++P+SV LVSIL A A
Sbjct: 520 HSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIA 579
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
+ +L GK++H +R +G + ++L+DMY CG M A F + +DV W
Sbjct: 580 GLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTA 639
Query: 570 LLTGYAERGQGALAEEFFRKMIDS 593
++ G G A + F++M+ +
Sbjct: 640 MINATGMHGHGKQAIDLFKRMLQT 663
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 273/542 (50%), Gaps = 23/542 (4%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG--LYLHS 119
+ ++ L LC G L QAL+ L + + ++ L +R EG ++ H+
Sbjct: 28 SASASLKRLCKEGDLRQALRQLTTRAP----PAREHYGWVLDLVAARRAAAEGRQVHAHA 83
Query: 120 VVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
V + +++ L + M+ + G + A +F M R +FSWN L+G Y +G
Sbjct: 84 VTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAG 143
Query: 179 EALSLY--QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA+ +Y R G PD T VL+ CG D + G EVH ++ G + V N
Sbjct: 144 EAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVAN 203
Query: 237 ALITMYVKCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
ALI MY KCG L A VF+ + + RD SWN+++SG +NG ++ L LF M+
Sbjct: 204 ALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGF 263
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ T +V+ +G LGRE+H ++K G ++ CN L+ MY +G + +
Sbjct: 264 PMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKYGRVDSALR 322
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF ++ KD +SW +M+SCY + +A++ + M G PD + S+ SA L
Sbjct: 323 VFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSR 382
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L+ G + H A++ L + + + NTL+DMY KC I+ + +VF + ++ ISWT+I+
Sbjct: 383 LNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILAC 442
Query: 475 LRLNNRSFEALIFFRKMMLNLKP-----NSVTLVSILSACARIGALMCGKEIHAHALRIG 529
++R EAL +M+L L+ +S+ + SIL C + ++ K++H +A+R G
Sbjct: 443 FAQSSRHSEAL----EMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG 498
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFR 588
+ D L N L+D+Y CG + N F E +D+ +W ++ G+ A F
Sbjct: 499 L-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFT 557
Query: 589 KM 590
+M
Sbjct: 558 EM 559
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 205/442 (46%), Gaps = 13/442 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ N +A+ + M + D +V+L + G H+ K
Sbjct: 336 NSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIK 395
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H +++GN + M++K G + + VF M RD SW ++ +A++ EAL +
Sbjct: 396 QRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEM 455
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ G+ D +L TC G+ + K+VH + IR G D+ + N LI +Y
Sbjct: 456 ILEL-QKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYG 513
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG+ + +F + K+D +SW +MI+ NG + LF M++ + PD + L S
Sbjct: 514 ECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVS 573
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + G++VHG++I+ F + V + L+ MY G+ +VF R + KD
Sbjct: 574 ILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKD 633
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-----GNLDLG 418
VV WT MI+ +A++ ++ M G PD ++ ++L AC+ G L
Sbjct: 634 VVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLD 693
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
I + + ++ Y + +D+ + ++A E +P D W +++ R+
Sbjct: 694 IMVSKYRLKPWQEHYACV----VDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRV 749
Query: 478 NNRSFEALIFFRKMMLNLKPNS 499
+R++ + +L L+P++
Sbjct: 750 -HRNYGLAVVAANKLLELEPDN 770
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 277/549 (50%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M+ L I D +++ C Y GL +H + +
Sbjct: 107 NSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQ 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A + M+ K L A+ VF +M +R+L W+ +I GY + F E L L
Sbjct: 167 MGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M VG GV T+ V R+C G+ K G ++H H ++ + D + A + MY
Sbjct: 227 FKDMLKVGMGVSQS--TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMY 284
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC + A VF+ +P R S+NA+I GY + +K L +F ++ + D ++LS
Sbjct: 285 AKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLS 344
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++A ++ G ++HG +K G ++ V N ++ MY G E +F ME +
Sbjct: 345 GALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERR 404
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + K + + M PD+ T SV+ ACA L+ G ++H
Sbjct: 405 DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIH 464
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++G+ + + L+DMY KC + +A ++ ++ +K +SW SII G +S
Sbjct: 465 GRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSE 524
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A +F +M+ + + P++ T ++L CA + + GK+IHA L++ + D ++ + L+
Sbjct: 525 NAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLV 584
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG M+ + F + +RD W+ ++ YA G G A F +M ++ K N
Sbjct: 585 DMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHT 644
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 645 IFISVLRAC 653
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 265/525 (50%), Gaps = 32/525 (6%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++++ C + + G +H+ + T ++ + N L + K + +A+ VF +M R
Sbjct: 11 HILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQR 70
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRM--------------FWVGGVK----------- 194
D+ SWN LI GYA G A SL+ M + GV
Sbjct: 71 DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130
Query: 195 -----PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
D TF +L+ C G+ D G +VH I+ G+E DV +AL+ MY KC L
Sbjct: 131 SLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLD 190
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF MP+R+ + W+A+I+GY +N +++GL LF M +V + T +SV +
Sbjct: 191 DAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA 250
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ KLG ++HG+ +K F+ D + + MY + KVF+ + + S+
Sbjct: 251 GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNA 310
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I Y KA++ +Q ++ DEI+++ L+AC+ + GI+LH LA++ G
Sbjct: 311 IIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCG 370
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L I +ANT++DMY KC + +A +F ++ ++ +SW +II N + L F
Sbjct: 371 LGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFV 430
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + ++P+ T S++ ACA AL G EIH ++ G+ D F+ +AL+DMY +CG
Sbjct: 431 SMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCG 490
Query: 549 RMKPAWN-QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A E+ +WN +++G++ + Q A+ +F +M++
Sbjct: 491 MLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLE 535
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 39/431 (9%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC------------- 245
TF +L+ C + L GK+VH +I G+ + V N L+ Y K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 246 ------------------GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
G++ A+ +FD MP+RD +SWN+++S Y NG K + +F+
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
MR + + D+ T + ++ A + D LG +VH I+MGF +DV + L+ MY
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIAS 404
++ +VF M +++V W+ +I+ G V D+ +E ++ M G + T AS
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIA---GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
V +CA L LG +LH A+++ II +DMY+KC+ + A +VF+ +P+
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
S+ +II+G ++ +AL F+ + NL + ++L L+AC+ I + G ++H
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
A++ G+ F+ + N +LDMY +CG + A F E RD +WN ++ + + +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 583 AEEFFRKMIDS 593
F M+ S
Sbjct: 425 TLSLFVSMLRS 435
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 216/436 (49%), Gaps = 7/436 (1%)
Query: 77 EQALKYLD---SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
+Q LK LD S+Q N+ DE +L + C + + EG+ LH + K ++ +
Sbjct: 319 DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L M+ K G L A +F +M RD SWN +I + + + LSL+ M +
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML-RSTM 437
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD +T+ V++ C G L G E+H +I+ G D V +AL+ MY KCG L+ A
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ + ++ +SWN++ISG+ + F M E+ + PD T ++V+ +
Sbjct: 498 IHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMAT 557
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG+++H ++K+ DV + + L+ MY GN ++ +F + +D V+W+ MI
Sbjct: 558 IELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICA 617
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLIS 432
Y L +KA+ ++ M+ P+ SVL ACA +G +D G+ Q + GL
Sbjct: 618 YAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDP 677
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + ++D+ + +++AL++ +P + + + W +++ ++ A F
Sbjct: 678 QMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNS- 736
Query: 492 MLNLKPNSVTLVSILS 507
+L L P + +L+
Sbjct: 737 LLQLDPQDSSAYVLLA 752
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+T S ++ + G++VH +I GF + V N L++ Y KVF R
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 359 MESKDVVSWTTMI-------------------------------SCYEGSVLPDKAVETY 387
M +DV+SW T+I SCY + + K++E +
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M + D T A +L AC+ + + LG+++H LA++ G + ++ + L+DMYSKC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSIL 506
K +D A VF ++P++N++ W+++I G N+R E L F+ M+ + + + T S+
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVS 565
+CA + A G ++H HAL+ A+D + A LDMY +C RM AW FN+
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
++N ++ GYA + QG A + F+ +
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSL 331
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++T + +L C+ L L+ G ++H + TG + I +AN L+ Y K ++ A +VF
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 459 QIPDKNVISWTSIILGLR----------------------------------LNNRSFEA 484
++P ++VISW ++I G +N +S E
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE- 124
Query: 485 LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
IF R L + + T IL AC+ I G ++H A+++G D +AL+DMY
Sbjct: 125 -IFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+C ++ A+ F ER++ W+ ++ GY + + + F+ M+
Sbjct: 184 SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T IL C+ + AL GK++H + G ++ N LL Y + +M A+ F+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLMGLF 604
+RDV +WN L+ GYA G A+ F M + +W L+ +
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCY 113
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 241/446 (54%), Gaps = 13/446 (2%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R L++WN++I GFF + L++Y M GV + T+P +L+ C +P ++ G
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAH-SGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H HV++ G++AD V AL+ MY KC + AR VFD MP+R +SWNAM+S Y
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDE--KLGREVHGYVIKMGFSD-DVS 334
+ L L M + +P T S++S S L E LG+ +H +IK+G +VS
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---ME 391
+ N L+ MY+ F +E KVF M+ K ++SWTTMI Y V AVE Y + M+
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY---VKIGHAVEAYGLFYQMQ 244
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+ D + +++S C + +L L +H L ++ G + N LI MY+KC +
Sbjct: 245 HQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLT 304
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A +F I +K+++SWTS+I G EAL FR+M+ +++PN TL +++SACA
Sbjct: 305 SARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACA 364
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+G+L G+EI + G+ D + +L+ MY +CG + A F ++D++ W
Sbjct: 365 DLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTS 424
Query: 570 LLTGYAERGQGALAEEFFRKMIDSKG 595
++ YA G G A F KM ++G
Sbjct: 425 MINSYAIHGMGNEAISLFHKMTTAEG 450
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 251/531 (47%), Gaps = 10/531 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG Q L SM + + L++ C G LH V K +
Sbjct: 24 NGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFV 83
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K + A VF +M R + SWN ++ Y++ D+ALSL + M WV G
Sbjct: 84 QTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEM-WVLG 142
Query: 193 VKPDVYTFPCVLRTCGGVPDLK---RGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
+P TF +L + + GK +H +I+ G +V + N+L+ MYV+ +
Sbjct: 143 FEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLM 202
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD M ++ ISW MI GY + G ++ LF M+ V DF+ ++IS
Sbjct: 203 DEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGC 262
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
V D L VH V+K G ++ V N LI MY GN ++F + K ++SWT
Sbjct: 263 IQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWT 322
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+MI+ Y P +A++ ++ M P+ T+A+V+SACA LG+L +G ++ +
Sbjct: 323 SMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLN 382
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL S + +LI MYSKC I KA EVF ++ DK++ WTS+I ++ EA+ F
Sbjct: 383 GLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLF 442
Query: 489 RKMML--NLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYV 545
KM + P+++ S+ AC+ G + G K + G+ L+D+
Sbjct: 443 HKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLG 502
Query: 546 RCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMIDSK 594
R G++ A N DV A W LL+ G L E +++DS
Sbjct: 503 RVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSS 553
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 8/356 (2%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+R +WN MI NG + + L ++ M V + +T ++ A + + G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+HG+V+K+GF D V L+ MY + +VF M + VVSW M+S Y
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD---LGIKLHQLAMRTGLISY-II 435
D+A+ + M G P T S+LS + L + + LG +H ++ G++ +
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLN 494
+AN+L+ MY + +D+A +VF + +K++ISWT++I G + EA +F++ +
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ + V ++++S C ++ L+ +H+ L+ G + N L+ MY +CG + A
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
F+ E+ + +W ++ GY G A + FR+MI D + N L + C
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSAC 363
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 234/392 (59%), Gaps = 4/392 (1%)
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V GV D +TFPCVL+ CG V D+ RG E+H +I+ GY++ V V N+L++MY KC D++
Sbjct: 3 VLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDIL 62
Query: 250 RARLVFDGMPKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR +FD M +R D +SWN++IS Y NG+ M+ L LF M++ V + TL + + A
Sbjct: 63 GARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC 122
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
E +KLG E+H ++K DV V N L+ M++ FG ++F ++ KD ++W
Sbjct: 123 EDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWN 182
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+MI+ + + L ++A++ + ++ PDE+++ S+L+A LG L G ++H AM+
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
L S + I NTLIDMYSKC C+ A VF ++ +K++ISWT++I NN EAL
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
RK+ + +++ + S L AC+ + L KE+H + L+ G++ D + N ++D+Y C
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADC 361
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
G + A F S + +DV +W +++ Y G
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNG 393
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 275/512 (53%), Gaps = 5/512 (0%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+ L + D +++ C G +H ++ K V + N+ +SM+ K D
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 146 LGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+ A +F +M +R D+ SWN +I Y+ G EAL L++ M GV + YT L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREM-QKAGVGANTYTLVAAL 119
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ C K G E+H +++ DV V NAL+ M+V+ G + A +FD + ++D I
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
+WN+MI+G+ +NG Y + L F +++ + PD ++L S+++AS +G G+E+H Y
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+K ++ + N LI MY VF +M +KD++SWTT+I+ Y + +A+
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ + ++ +G D + I S L AC+ L L ++H ++ GL S +++ N +ID+Y
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVY 358
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLV 503
+ C I+ A +F I K+V+SWTS+I N + EAL +F+ +++P+S+TLV
Sbjct: 359 ADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLV 418
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNER 562
SILSA A + AL GKEIH R G +G N+L+DMY CG ++ A+ F + +
Sbjct: 419 SILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSK 478
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ W ++ Y G+G A E F M D K
Sbjct: 479 SLVLWTTMINAYGMHGRGKAAVELFSIMEDQK 510
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 276/534 (51%), Gaps = 8/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LNG +AL MQ+ + + LV ++ CE G+ +H+ + K
Sbjct: 81 NSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILK 140
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L V + NA ++M V+FG + +A +F ++ ++D +WN +I G+ + G ++EAL
Sbjct: 141 SNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQF 200
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + +KPD + +L G + L GKE+H + ++ ++++ + N LI MY
Sbjct: 201 FCGL-QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYS 259
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A LVFD M +D ISW +I+ Y +N + + L L ++ +D D M + S
Sbjct: 260 KCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGS 319
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ A + +EVHGY +K G SD + + N +I +Y GN ++F ++ KD
Sbjct: 320 TLLACSGLRCLSHAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNINYATRMFESIKCKD 378
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VVSWT+MISCY + L ++A+ + +M+ PD IT+ S+LSA A L L+ G ++H
Sbjct: 379 VVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHG 438
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
R G + N+L+DMY+ C ++ A +VF K+++ WT++I ++ R
Sbjct: 439 FIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKA 498
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--AL 540
A+ F M L P+ +T +++L AC+ G + GK + ++ + + + L
Sbjct: 499 AVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL-LETMKCKYQLEPWPEHYACL 557
Query: 541 LDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+D+ R ++ A++ S + + +A W L L E +K++D
Sbjct: 558 VDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLD 611
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 166/310 (53%), Gaps = 4/310 (1%)
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MR + V D T V+ A +V D G E+HG +IK G+ V V N L+ MY +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 349 REEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
K+F RM E DVVSW ++IS Y + +A+ ++ M+ G + T+ + L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC LG+++H +++ + + +AN L+ M+ + + A +F ++ +K+ I+
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W S+I G N EAL FF + NLKP+ V+L+SIL+A R+G L+ GKEIHA+A+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEE 585
+ + + + N L+DMY +C + A F+ +D+ +W ++ YA+ A +
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 586 FFRKMIDSKG 595
RK + +KG
Sbjct: 301 LLRK-VQTKG 309
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 256/489 (52%), Gaps = 12/489 (2%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R +G LH+ + K+ S V + N+ ++++ K L A +VF ++ ++D+ SWN +I
Sbjct: 20 RSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 169 GGYAKAG--FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
GY++ G + L+QRM P+ +TF V + D G+ H I+
Sbjct: 79 NGYSQHGPSGSSHVMELFQRMR-AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKM 137
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
DV V ++L+ MY K G AR VFD MP+R+ +SW MISGY + L LF
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197
Query: 287 IMMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
+MR + +SV+SA ELV + G+++H +K G VSV N L+ MY
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNN---GKQIHCIAVKNGLLSIVSVGNALVTMY 254
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G+ ++ + F K+ ++W+ MI+ Y S DKA++ + M G P E T
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
V++AC+ LG G ++H ++ G S I + L+DMY+KC I A + F + +
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIH 522
+++ WTS+I G N + +AL + +M M + PN +T+ S+L AC+ + AL GK+IH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
A ++ G + + +AL MY +CG +K F RDV +WN +++G ++ G G
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494
Query: 582 LAEEFFRKM 590
A E F +M
Sbjct: 495 EALELFEEM 503
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 218/402 (54%), Gaps = 4/402 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H+V K S V +G++ ++M+ K G A VF M +R+ SW +I GYA
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADV 232
EAL L+ R+ + + F VL +P+L GK++H ++ G + V
Sbjct: 187 QKLAAEALGLF-RLMRREEEGENEFVFTSVLSALT-LPELVNNGKQIHCIAVKNGLLSIV 244
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+TMY KCG L A F+ ++ I+W+AMI+GY ++G+ K L LF M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLS 304
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P T VI+A +G G++VH Y++K+GF + V L+ MY + +
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ D+V WT+MI Y + + A+ Y ME EG +P+E+T+ASVL AC+ L
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+ G ++H ++ G + I + L MY+KC C+ VF ++P ++VISW ++I
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
GL N EAL F +M L KP+ VT V+ILSAC+ +G
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++ALK SM I E V ++ C EG +H + K + +
Sbjct: 288 SGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K + A F + + D+ W +IGGY + G ++ALSLY RM + G
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRM-EMEG 406
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T VL+ C + L++GK++H +++G+ +V + +AL TMY KCG L
Sbjct: 407 ILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGT 466
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF MP RD ISWNAMISG +NG + L LF M+ PD++T +++SA +G
Sbjct: 467 LVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E AL M+ I +E + ++++ C ++G +H+ K L V +
Sbjct: 389 NGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPI 448
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A +M+ K G L VF +M RD+ SWN +I G ++ G EAL L++ M + G
Sbjct: 449 GSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM-QLEG 507
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KPD TF +L C + ++RG + FG + V+ ++ + + G L A
Sbjct: 508 TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 275/539 (51%), Gaps = 9/539 (1%)
Query: 57 SIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
S A KN NS ++ N +A K M + N+ + V+++ CE +
Sbjct: 316 SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWY 375
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH+ V K + + A LSM+ K GDL A ++F +M R+L SWN +I GY
Sbjct: 376 GKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGH 435
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G ++ ++ + M + G PD + +L C + + GK H R ++++++
Sbjct: 436 NGLWEASMDAFCDMQF-EGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLN 494
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ NAL+ Y CG L + +F MP R+ ISWN +ISG NG+ K + L M++
Sbjct: 495 ISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEK 554
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ D +TL S+I + + G +HGY IK GF+ DVS+ N LI MY + G+ G+
Sbjct: 555 MELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGK 614
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F M + +VSW +I+ Y L ++ + ++ M EG P+ +T+ ++L +C L
Sbjct: 615 FLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLL 674
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
G +H A+RTG+I I +LI MY++ + I+ + +F +++ W +I+
Sbjct: 675 Q---GKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMS 731
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ E++ FF +++ ++P+ +T +S++SAC ++ +L + A+ ++ G
Sbjct: 732 VYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDK 791
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+D++ RCG + A F + +D +W+ ++ GY G A +M
Sbjct: 792 HIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQM 850
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 271/533 (50%), Gaps = 6/533 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG ++ + L + E+ + + +++ LC + D G +H V K
Sbjct: 225 NALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVK 284
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L A +SM+ G+L A +F ++++ WN +I YA+ EA +
Sbjct: 285 SGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKM 344
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q+M ++P+V TF ++ C + GK +H HV+++ ++ + V AL++MY
Sbjct: 345 FQQML-KANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYA 403
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GDL A +F MP+R+ +SWN+MISGY NG + + F M+ DPD +++ +
Sbjct: 404 KLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVN 463
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA + LG+ H + + F ++++ N L+ Y G K+F +M ++
Sbjct: 464 ILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRN 523
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW T+IS + KAV M+ E D +T+ S++ C NL G+ LH
Sbjct: 524 AISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHG 583
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++TG + + N LI MY C I+ +F +P ++++SW ++I G R + E
Sbjct: 584 YAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNE 643
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ F +M+ KPN VTL+++L +C L+ GK IHA A+R GV + + +L+
Sbjct: 644 VMASFCQMIREGQKPNYVTLLNLLPSCR---TLLQGKSIHAFAVRTGVIVETPIITSLIS 700
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
MY R + F + D++ WN +++ Y + + FF +++ ++
Sbjct: 701 MYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHAR 753
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 274/549 (49%), Gaps = 5/549 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N + LC +G E L + L D+ +++ C +H +V +
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLR 183
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T ++ + A + + K G + A V K+ DL +WN LI GY+ GF E +
Sbjct: 184 TSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 243
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++ +G +KP+V TF ++ C + L GK +H V++ G+ +D + ALI+MY
Sbjct: 244 LRQINEMG-LKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYA 302
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
G+L AR +FD +++ + WN+MIS Y +N + + +F M + + P+ +T S
Sbjct: 303 GGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVS 362
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+I E + G+ +H +V+K +SV L+ MY G+ + +F +M ++
Sbjct: 363 IIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRN 422
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW +MIS Y + L + +++ + M+ EG PD I+I ++LSAC+ L + LG H
Sbjct: 423 LLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHA 482
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ R S + I+N L+ YS C + + ++F ++P +N ISW ++I G N + +
Sbjct: 483 FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKK 542
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ KM ++ + VTL+SI+ C L+ G +H +A++ G A D L NAL+
Sbjct: 543 AVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALIS 602
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRK 599
MY CG + F R + +WN L+TGY F +MI K N+
Sbjct: 603 MYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVT 662
Query: 600 LMGLFRKCQ 608
L+ L C+
Sbjct: 663 LLNLLPSCR 671
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 243/496 (48%), Gaps = 11/496 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG E ++ MQ D ++VN++ C G H+ +
Sbjct: 427 NSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFR 486
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + NA L+ + G L ++ +F KM R+ SWN LI G G +A++L
Sbjct: 487 KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL 546
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+M ++ D+ T ++ C +L +G +H + I+ G+ DV +VNALI+MY
Sbjct: 547 LHKM-QQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYF 605
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGY---FENGEYMKGLMLFIMMREVLVDPDFMT 300
CGD+ + +F+ MP R +SWNA+I+GY + E M F M P+++T
Sbjct: 606 NCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMAS---FCQMIREGQKPNYVT 662
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L +++ + + G+ +H + ++ G + + LI MY F N +F
Sbjct: 663 LLNLLPSCRTLLQ---GKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 719
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D+ W ++S Y + ++V + + PD IT S++SAC L +L+L
Sbjct: 720 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNS 779
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+ ++ G +I+I+N LID++++C I A ++F + K+ +SW+++I G L+
Sbjct: 780 VMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD 839
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S AL +M L+ +KP+ +T S+LSAC+ G + G I + GV
Sbjct: 840 SEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYAC 899
Query: 540 LLDMYVRCGRMKPAWN 555
++D+ R G++ A++
Sbjct: 900 MVDLLGRTGQLNEAYD 915
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 5/386 (1%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P V +F + C + +LK V +I D VV I G A
Sbjct: 55 PKVTSFLRLFDLCRNIENLKPLGSV---LIVRDLMRDEYVVAEFIISCFHLGAPELALSA 111
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + K N MI ++G + L +++ R + D T VI A +G
Sbjct: 112 FEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAV 171
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ VH V++ F +++ + L+ Y G + V ++ D+V+W +IS Y
Sbjct: 172 WIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGY 231
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ + E + + G P+ T AS++ C + LD+G +H +++G S
Sbjct: 232 SLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDE 291
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
+ LI MY+ + A ++F +KNV+ W S+I N +S EA F++M+
Sbjct: 292 FLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKA 351
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
N++PN VT VSI+ C GK +HAH ++ + + ALL MY + G + A
Sbjct: 352 NMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSA 411
Query: 554 -WNQFNSNERDVSAWNILLTGYAERG 578
+ + R++ +WN +++GY G
Sbjct: 412 DFIFYQMPRRNLLSWNSMISGYGHNG 437
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 46/332 (13%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
L+NL+ C R +G +H+ +T + + + +SM+ +F ++ ++F
Sbjct: 662 TLLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMG 718
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
D+ WN ++ Y + E+++ + + V+PD TF ++ C + L
Sbjct: 719 GKEDIALWNAIMSVYVQTKNAKESVTFFCELLH-ARVEPDYITFLSLISACVQLSSLNLS 777
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
V +VI+ G++ + + NALI ++ +CG++ A+ +F+G+ +D +SW+ MI+GY +
Sbjct: 778 NSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLH 837
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G+ L L MR + PD +T +SV+SA HG I G+ +
Sbjct: 838 GDSEAALALLSQMRLSGMKPDGITYASVLSACS-----------HGGFIDQGW----MIF 882
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESK----DVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
N ++ EEG V RME D++ T ++ E Y +E
Sbjct: 883 NSMV---------EEG--VPRRMEHYACMVDLLGRTGQLN------------EAYDFVEK 919
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
P + S+L AC GN+ LG K+ L
Sbjct: 920 LPCKPSVSLLESLLGACIIHGNVKLGEKISSL 951
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 272/508 (53%), Gaps = 3/508 (0%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M L I +E A ++++ C + G +H +V T + N+ + ++ K G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
G A +F + DR + SWN L Y + EA+SL+ M + G++P+ ++ ++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMV-LSGIRPNEFSLSSMIN 119
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C G+ D +G+++H ++I+ GY++D NAL+ MY K G L A VFD + K D +S
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WNA+I+G + + + L L M + + P+ TLSS + A + +LGR++H +I
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
KM D + LI MY + ++ VF M +D+++W +IS + + ++A
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ +M EG ++ T+++VL + A L + ++H L++++G + N+LID Y
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYG 359
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
KC ++ A VF + P +++ +TS++ + + EAL + +M +KP+S S
Sbjct: 360 KCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RD 563
+L+ACA + A GK++H H L+ G D F N+L++MY +CG ++ A F+ R
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +W+ ++ G A+ G G A + F++M+
Sbjct: 480 IVSWSAMIGGLAQHGYGKEALQLFKQML 507
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 222/406 (54%), Gaps = 8/406 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K + + FP VL+ C DL GK+VH V+ G+++D V N+L+ +Y KCG A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD +P R +SWNA+ S Y + + + + LF M + P+ +LSS+I+ +
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D GR++HGY+IK+G+ D N L+ MY G E+ VF + D+VSW +I
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 372 SCYEGSVLPD---KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+ G VL + +A+E + M G P+ T++S L ACA + +LG +LH ++
Sbjct: 185 A---GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM 241
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ S + LIDMYSKC +D A VF +P++++I+W ++I G N EA F
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF 301
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + N TL ++L + A + A ++IHA +L+ G FD ++ N+L+D Y +C
Sbjct: 302 PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G ++ A F + D+ + L+T YA+ GQG A + +M D
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD 407
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 255/499 (51%), Gaps = 7/499 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M I +E +L +++ +C +G +H + K NA +
Sbjct: 94 EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A VF ++ D+ SWN +I G + AL L + M G+ P++
Sbjct: 154 DMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMN-KSGMCPNM 212
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T L+ C G+ + G+++H +I+ +D + LI MY KC + ARLVF
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKL 272
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MP+RD I+WNA+ISG+ +N E + LF +M + + TLS+V+ + + +
Sbjct: 273 MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMC 332
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++H +K GF D V N LI Y G+ E+ +VF D+V +T++++ Y
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQD 392
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
++A+ Y M+ G PD +S+L+ACA L + G ++H ++ G +S I
Sbjct: 393 GQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAG 452
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLK 496
N+L++MY+KC I+ A F +IP + ++SW+++I GL + EAL F++M+ + +
Sbjct: 453 NSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVP 512
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAW 554
PN +TLVS+L AC G + K + ++++I + + ++D+ R G+++ A
Sbjct: 513 PNHITLVSVLCACNHAGLVAEAKH-YFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAM 571
Query: 555 NQFNSNERDVSA--WNILL 571
N +A W LL
Sbjct: 572 ELVNKMPFQANALVWGALL 590
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL+ MQ+ I D +L+ C Y++G +H + K +
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFA 451
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ ++M+ K G + A F ++ R + SW+ +IGG A+ G+ EAL L+++M V G
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKV-G 510
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVKCGDLVRA 251
V P+ T VL C + K + I FG E + +I + + G L A
Sbjct: 511 VPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAA 570
Query: 252 RLVFDGMP-KRDRISWNAMI 270
+ + MP + + + W A++
Sbjct: 571 MELVNKMPFQANALVWGALL 590
>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 259/477 (54%), Gaps = 16/477 (3%)
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
SH+SV N+ +S++ + D+ A +F ++ +D+ SWN ++ G+A G E L
Sbjct: 326 SHVSV--ANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLV 383
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD-VDVVNALITMYVK 244
+M VG +PD+ T +L C + + G+ +H + IR +D V ++N+LI MY K
Sbjct: 384 QMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSK 443
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
C + +A L+F+ ++D +SWNAMISGY N + LF M + T+ ++
Sbjct: 444 CNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAI 503
Query: 305 ISA--SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
+S+ S + G+ VH + +K GF + + + N L+ MY++ G+ + +
Sbjct: 504 LSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSAL 563
Query: 362 KDVVSWTTMISCYEGSVLPD---KAVETYQMMEAEGSMP-DEITIASVLSACACLGNLDL 417
D+ SW T+I G V D +A+ET+ +M E + D IT+ S LSACA L +L
Sbjct: 564 ADIASWNTLIV---GCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNL 620
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G LH L +++ L S + N+LI MY +C+ I+ A VF N+ SW +I L
Sbjct: 621 GKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSH 680
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
N S EAL F + L +PN +T++ +LSAC +IG L GK++HAH R + + F+
Sbjct: 681 NRESREALELF--LNLQFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFIS 738
Query: 538 NALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
AL+D+Y CGR+ A F ++ E+ SAWN +++ Y G+G A + F +M +S
Sbjct: 739 AALIDLYSNCGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCES 795
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 267/537 (49%), Gaps = 10/537 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A+ + D M + D L+ +V + +D+G +H V K+ + + LGNA +
Sbjct: 176 AMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVD 235
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K GDL + ++ ++ +D SWN ++ G ++AL ++RM + +V
Sbjct: 236 MYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNV- 294
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+ C + + +L G+ VH I+ GY++ V V N+LI++Y +C D+ A +F +
Sbjct: 295 SLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREI 354
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLG 317
+D +SWNAM+ G+ NG+ + L + M++V PD +TL +++ + + G
Sbjct: 355 ALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREG 414
Query: 318 REVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
R +HGY I+ SD V + N LI MY E+ E +F+ KD VSW MIS Y
Sbjct: 415 RTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSH 474
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL--GNLDLGIKLHQLAMRTGLISYI 434
+ ++A + M G T+ ++LS+C L ++ G +H +++G +++I
Sbjct: 475 NRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHI 534
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++ N L+ MY C + + + H+ ++ SW ++I+G + EAL F M
Sbjct: 535 LLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQ 594
Query: 494 N--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L +S+TLVS LSACA + GK +H ++ + D + N+L+ MY RC +
Sbjct: 595 EPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDIN 654
Query: 552 PAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKC 607
A F + ++ +WN +++ + + A E F + + N ++G+ C
Sbjct: 655 SAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNL-QFEPNEITIIGVLSAC 710
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 242/487 (49%), Gaps = 16/487 (3%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+ ++LC K H K + + + L+++ K GD + +F ++
Sbjct: 94 LVDYIKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQ 153
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+RD +WN ++ + + A+ + +M D T ++ + + +G+
Sbjct: 154 NRDAIAWNAIVAASLENKCYRIAMDFFDKMI-KAQTGFDSTTLLLIVSASLHMKNFDQGR 212
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H I+ G D+ + NAL+ MY KCGDL + +++ + +D +SWN+++ G N
Sbjct: 213 AIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNR 272
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
K L F M D ++L ISAS +G+ G+ VHG IK+G+ VSV N
Sbjct: 273 HPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVAN 332
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY----QMMEAE 393
LI +Y + + E +F + KD+VSW M+ EG K E + QM +
Sbjct: 333 SLISLYSQCEDIKAAETLFREIALKDIVSWNAMM---EGFASNGKIKEVFDLLVQMQKVG 389
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDK 452
PD +T+ ++L CA L G +H A+R +IS ++++ N+LI MYSKC ++K
Sbjct: 390 FFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEK 449
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN--SVTLVSILSAC- 509
A +F+ +K+ +SW ++I G N S EA F + ML PN S T+ +ILS+C
Sbjct: 450 AELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTE-MLRWGPNCSSSTVFAILSSCN 508
Query: 510 -ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSA 566
I ++ GK +H L+ G L N L+ MY+ CG + +++ + N D+++
Sbjct: 509 SLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIAS 568
Query: 567 WNILLTG 573
WN L+ G
Sbjct: 569 WNTLIVG 575
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 158/328 (48%), Gaps = 5/328 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ L N + M++ GDL ++ + + D+ SWN LI G + F EAL + M
Sbjct: 534 ILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMR 593
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ D T L C + GK +H ++ +D V N+LITMY +C D+
Sbjct: 594 QEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDI 653
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A++VF + SWN MIS N E + L LF+ ++ +P+ +T+ V+SA
Sbjct: 654 NSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQ---FEPNEITIIGVLSAC 710
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G + G++VH +V + D+ + LI +Y + G + +VF + K +W
Sbjct: 711 TQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESAWN 770
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-R 427
+MIS Y +KA++ + M G+ + T S+LSAC+ G ++ G+ ++ + R
Sbjct: 771 SMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECMLER 830
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALE 455
G+ ++DM + +D+A E
Sbjct: 831 YGVQPETEHQVYVVDMLGRSGRLDEAYE 858
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 254/482 (52%), Gaps = 32/482 (6%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
FGD+ A VF + +F WN +I GY++ F +AL +Y M + V PD +TFP
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPH 124
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C G+ L+ G+ VH V R G++ADV V N LI +Y KC L AR VF+G+P +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 263 R--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R +SW A++S Y +NGE M+ L +F MR++ V PD++ L SV++A + D K GR +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+KMG + + L MY G + +F +M+S +++ W MIS Y +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+A++ + M + PD I+I S +SACA +G+L+ +++ R+ + I++ L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNS 499
IDM++KC ++ A VF + D++V+ W+++I+G L+ R+ EA+ +R M + PN
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 500 VTLVSILSACARIGA---------LMCGKEIHAHALRIGVAFDGFLPNALLDM---YVRC 547
VT + +L AC G LM +I+ D LD ++C
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 548 GRMKPAWNQFNSNERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMG 602
++P V+ W LL+ + E G+ A A++ F + G++ +L
Sbjct: 485 MPVQPG----------VTVWGALLSACKKHRHVELGEYA-AQQLFSIDPSNTGHYVQLSN 533
Query: 603 LF 604
L+
Sbjct: 534 LY 535
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 4/378 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H ++ G + ++ LI GD+ AR VFD +P+ WNA+I GY N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L+++ M+ V PD T ++ A + ++GR VH V ++GF DV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 337 NPLIKMYLSFGNREEGEKVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI +Y VF + + +VSWT ++S Y + P +A+E + M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD + + SVL+A CL +L G +H ++ GL + +L MY+KC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F ++ N+I W ++I G N + EA+ F +M+ +++P+++++ S +SACA++G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLT 572
+L + ++ + R D F+ +AL+DM+ +CG ++ A F+ +RDV W+ ++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 573 GYAERGQGALAEEFFRKM 590
GY G+ A +R M
Sbjct: 398 GYGLHGRAREAISLYRAM 415
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 215/446 (48%), Gaps = 8/446 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + AL +MQ + D +L++ C G ++H+ V + V +
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 133 GNAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N ++++ K LG A VF + +R + SW ++ YA+ G EAL ++ M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
VKPD VL + DLK+G+ +H V++ G E + D++ +L TMY KCG +
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+++FD M + I WNAMISGY +NG + + +F M V PD ++++S ISA
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG + R ++ YV + + DDV + + LI M+ G+ E VF R +DVV W+ M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y +A+ Y+ ME G P+++T +L AC G + G L +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKI 455
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFR 489
+ID+ + +D+A EV +P V W +++ + +R E +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK-KHRHVELGEYAA 514
Query: 490 KMMLNLKPNSV---TLVSILSACARI 512
+ + ++ P++ +S L A AR+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARL 540
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG +A+ M ++ D ++ + + C ++ ++ V +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + +A + MF K G + A VF + DRD+ W+ +I GY G EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+ M GGV P+ TF +L C ++ G + +I +
Sbjct: 412 YRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLG 470
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG-----YFENGEYMKGLMLFIMMREVLVDPD 297
+ G L +A V MP + ++ W A++S + E GEY + I DP
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI-------DPS 523
Query: 298 ----FMTLSSVISASEL 310
++ LS++ +A+ L
Sbjct: 524 NTGHYVQLSNLYAAARL 540
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 262/515 (50%), Gaps = 9/515 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ M+ + + + C +G +HS V + V + A +
Sbjct: 187 EALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G L A VF +M + SWN ++ + G EAL +QRM GG+ PD
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDK 306
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L C L G+ +H +++ GY+ + V N ++TMY CG + A F
Sbjct: 307 VTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +RD ISWN +ISG+ + G + + LF M + PD T S+I + + + K+
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKIL 426
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
E+ +++ G DV + + LI M+ +GN E +F M+ +D+V WT++IS Y
Sbjct: 427 SEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQH 483
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
D A+ ++M EG M ++ T+ + L+ACA L L G +H A+ G + +
Sbjct: 484 GSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVG 543
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N LI+MY+KC C+++A VFHQ KN++SW +I ++ EAL F++M L LK
Sbjct: 544 NALINMYAKCGCLEEADRVFHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLK 602
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ V+ V++L+ C+ G++IH L G+ D + ALL+MY + A
Sbjct: 603 ADKVSFVTVLNGCSSASE---GRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ E RD+ +WN ++ G AE G A + F++M
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRM 694
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 73 NGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
+G +AL Y MQ + I D+ + ++ C G LH + + +
Sbjct: 283 HGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLI 342
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN ++M+ G + +A F M +RD SWN +I G+A+AGF DEA+ L++RM
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRML-AE 401
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD +TF ++ G ++ K + ++ G E DV +V+ALI M+ + G++ A
Sbjct: 402 GITPDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREA 458
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASEL 310
R +FD M RD + W ++IS Y ++G L +MR E L+ DF ++++ + + L
Sbjct: 459 RSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASL 518
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +H + I+ GF+ +V N LI MY G EE ++VF + K++VSW T+
Sbjct: 519 TALSE-GKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQC-GKNLVSWNTI 576
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y +A++ +Q M+ EG D+++ +VL+ C+ G K+H + + TG+
Sbjct: 577 AAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GRKIHNILLETGM 633
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I++ L++MY+ K +D+A +F ++ ++++SW ++I G + S EA+ F++
Sbjct: 634 ESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQR 693
Query: 491 MMLN-LKPNSVTLVSILSA--CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M L + P+ ++ V++L+A + +L + + G D + NA++ M+ R
Sbjct: 694 MQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRS 753
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ A F ERD ++WN+++T +A+ G+ A + FR+M
Sbjct: 754 GRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRM 797
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 272/529 (51%), Gaps = 6/529 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L +G +QA + M+ + D V ++ C G LH V +
Sbjct: 72 NSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLE 131
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V +G + + M+ K G + A VF K+ +D+ SW +I Y + EAL L
Sbjct: 132 AGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALEL 191
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM GV P+ T+ + C V + GK +H V+ G+E+DV V A++ MY
Sbjct: 192 FHRM-RPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYG 250
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLS 302
KCG L AR VF+ MP + +SWNA+++ ++G ++ L F M+ + + PD +T
Sbjct: 251 KCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFI 310
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++++A G +H +++ G+ + V N ++ MY S G + FS M +
Sbjct: 311 TILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D +SW T+IS + + D+AV ++ M AEG PD+ T S++ A + + L
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKI---LS 427
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+L + +G+ + + + LI+M+S+ + +A +F + D++++ WTSII + S
Sbjct: 428 ELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSD 487
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+AL R M L L N TLV+ L+ACA + AL GK IHAHA+ G A + NAL+
Sbjct: 488 DALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALI 547
Query: 542 DMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+MY +CG ++ A F+ +++ +WN + Y +R + A + F++M
Sbjct: 548 NMYAKCGCLEEADRVFHQCGKNLVSWNTIAAAYVQRDKWREALQLFQEM 596
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 254/481 (52%), Gaps = 7/481 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L+ LC K EG ++HS V + + NA + M+ K G + A VF +
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPS 67
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN L+ +A+ G F +A ++QRM + G+ PD TF VL C + DL RGK +H
Sbjct: 68 QVSWNSLLAAFARDGQFQQAFQIFQRM-KLQGLAPDRITFVTVLDGCSAIGDLSRGKLLH 126
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V+ G E +V V +LI MY KCG + AR VFD + +D +SW +MI Y ++ +
Sbjct: 127 GFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCV 186
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF MR V P+ +T ++ ISA V G+ +H V++ GF DV V ++
Sbjct: 187 EALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDE 399
MY G+ E+ +VF RM + VSW +++ +A+ +Q M+ +G + PD+
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDK 306
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T ++L+AC+ L G LH+ ++ G +++I+ N ++ MYS C ID A F
Sbjct: 307 VTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+ +++ ISW +II G EA+ FR+M+ + P+ T +SI+ AR+
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKIL 426
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
E+ + GV D FL +AL++M+ R G ++ A + F+ +RD+ W +++ Y +
Sbjct: 427 SELMVES---GVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQH 483
Query: 578 G 578
G
Sbjct: 484 G 484
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 214/396 (54%), Gaps = 3/396 (0%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF +L C + G+ VH V + D V NA I MY KCG + A VF +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
++SWN++++ + +G++ + +F M+ + PD +T +V+ +GD G+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+HG+V++ G +V V LIKMY G E+ +VF ++ +DVVSWT+MI Y
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+A+E + M G +P+ IT A+ +SACA + ++ G +H + G S ++++
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LK 496
+++MY KC ++ A EVF ++P N +SW +I+ + EAL +F++M L +
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ VT ++IL+AC+ L G+ +H L+ G + N ++ MY CGR+ A
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAF 363
Query: 557 FNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F++ ERD +WN +++G+A+ G A FR+M+
Sbjct: 364 FSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRML 399
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 226/449 (50%), Gaps = 17/449 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L ++ ++ L V L +A ++M ++G++ A +F M DRD+ W +I Y
Sbjct: 422 EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYV 481
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G D+AL R+ + G+ + +T L C + L GK +H H I G+ A
Sbjct: 482 QHGSSDDALGC-TRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASP 540
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY KCG L A VF K + +SWN + + Y + ++ + L LF M+
Sbjct: 541 AVGNALINMYAKCGCLEEADRVFHQCGK-NLVSWNTIAAAYVQRDKWREALQLFQEMQLE 599
Query: 293 LVDPDFMTLSSVI----SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
+ D ++ +V+ SASE GR++H +++ G D V L+ MY + +
Sbjct: 600 GLKADKVSFVTVLNGCSSASE-------GRKIHNILLETGMESDHIVSTALLNMYTASKS 652
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+E ++FSRME +D+VSW MI+ L +A++ +Q M+ EG PD+I+ +VL+A
Sbjct: 653 LDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNA 712
Query: 409 --CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ +L + +L G + I+ N ++ M+ + + +A F +I +++
Sbjct: 713 FSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAA 772
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG-KEIHAH 524
SW I+ + +AL FR+M + +P+S+TLVS+LSAC+ G + G +
Sbjct: 773 SWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSM 832
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
G+A ++D+ R GR+ A
Sbjct: 833 GREFGIAGSQEHYGCVVDLLARAGRLDQA 861
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 266/540 (49%), Gaps = 45/540 (8%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + + ++ C + G ++H +V ++ + +GNA ++M+ K G L A VF
Sbjct: 5 DNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVF 64
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RD+ SWN +I YA+AG EA+ L+Q M G ++PD TF V+ C L
Sbjct: 65 DGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSAL 124
Query: 214 KRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ G ++ V G ++DV + NAL+ MY KCG L A +VF+ M RD +SWNA+IS
Sbjct: 125 EAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISA 184
Query: 273 YFENGEYMKGLMLFIMM-------REVLVDPDFMTLSSVISASELVGDEKL--GREVHGY 323
+ + F M +E + PD TL+S ++A G E L GRE+H
Sbjct: 185 LARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAAC--TGPEMLEEGREIHAL 242
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
VI+ G ++ V N L+ MY + G ++ + F +M ++VVSW MI+ Y +A
Sbjct: 243 VIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEA 302
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M+ EG P+ +T + LSAC+ + G++LH + +GL + + N ++ M
Sbjct: 303 FRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHM 362
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSI------------------------------IL 473
++KC +D AL F +IP KN+ SW + IL
Sbjct: 363 FAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMIL 422
Query: 474 GLRLNNR-SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + + EA+ FR+M+ K NS+T ++L ACA L G+ IH G
Sbjct: 423 GAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGAD 482
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ NAL+DM+ +C + A F +D S+WN+L+ A+ G A + F +M
Sbjct: 483 SELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQM 542
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 230/458 (50%), Gaps = 47/458 (10%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD +F L++C + L GK +H+ VI G + V NAL+ MY KCG L A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-VLVDPDFMTLSSVISASEL 310
R VFDGM RD ISWNA+I+ Y + G + + LF M+E ++PD +T +V+SA
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120
Query: 311 VGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G ++ V + G D DV + N L+ MY G+ + VF RM+ +DVVSW
Sbjct: 121 PSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNA 180
Query: 370 MISCYEGSVLPDKAVETYQMMEAEG-------SMPDEITIASVLSACACLGNLDLGIKLH 422
+IS D A++ ++ M+ EG +PD T+AS L+AC L+ G ++H
Sbjct: 181 IISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIH 240
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
L + G S +++ N L+ MY+ C + ALE F ++ +NV+SW ++I +N
Sbjct: 241 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDK 300
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA F +M L ++PNSVT V+ LSAC+ A G ++H+ G+ D + NA++
Sbjct: 301 EAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVV 360
Query: 542 DMYVRC-------------------------------GRMKPAWNQFNS-NERDVSAWNI 569
M+ +C GR+ A F ERDV WN+
Sbjct: 361 HMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNM 420
Query: 570 LLTGYAERGQGALAEEFFRKMI--DSKGN---WRKLMG 602
+L Y ER A FR+MI +K N W ++G
Sbjct: 421 ILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLG 458
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 232/500 (46%), Gaps = 40/500 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + G ++A++ +MQE I D V +V C + G + ++V
Sbjct: 76 NAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVE 135
Query: 123 -KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ + V LGNA ++M+ K G L A VF +M RD+ SWN +I A+ D A+
Sbjct: 136 ERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAM 195
Query: 182 SLYQRMFWVG------GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
++ M G + PD +T L C G L+ G+E+H VI G E+++ V
Sbjct: 196 QRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVG 255
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NAL++MY CG L A F M +R+ +SWNAMI+ Y + + +F M+ V
Sbjct: 256 NALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQ 315
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM------------- 342
P+ +T + +SA + G ++H V + G D SV N ++ M
Sbjct: 316 PNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAA 375
Query: 343 ------------------YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
Y+ G E K+F ME +DV++W ++ Y + +AV
Sbjct: 376 FQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAV 435
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
++ M AEG+ + IT ++L ACA L G ++H+L G S + + N L+DM+
Sbjct: 436 RLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMF 495
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLV 503
KC + A + F +I K+ SW ++ L N + EAL F +M +KP VT +
Sbjct: 496 GKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFI 555
Query: 504 SILSACARIGALMCGKEIHA 523
+ AC+ G L K I A
Sbjct: 556 VVFWACSHAGRLEQAKTIFA 575
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 236/438 (53%), Gaps = 6/438 (1%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKE 218
D F + VLI D A+ LY R+ + + FP VLR C G + L G +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLV-SETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH +I+ G + D + +L+ MY + G+L A VFDGMP RD ++W+ ++S ENGE
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+K L +F M + V+PD +T+ SV+ +G ++ R VHG + + F D ++CN
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G+ E++F ++ K+ VSWT MIS Y +KA+ ++ M G P+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVF 457
+T+ SVLS+C +G + G +H A+R L +Y ++ L+++Y++C + V
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ D+N+++W S+I +AL FR+M+ +KP++ TL S +SAC G +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
GK+IH H +R V+ D F+ N+L+DMY + G + A FN R V WN +L G++
Sbjct: 423 LGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 576 ERGQGALAEEFFRKMIDS 593
+ G A F M S
Sbjct: 482 QNGNSVEAISLFDYMYHS 499
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 275/515 (53%), Gaps = 11/515 (2%)
Query: 100 NLVRLCEWKRGY-DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+++R C R + G +H + K + + L M+ + G+L A VF M
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV 164
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RDL +W+ L+ + G +AL +++ M GV+PD T V+ C + L+ +
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMV-DDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH + R ++ D + N+L+TMY KCGDL+ + +F+ + K++ +SW AMIS Y GE
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGE 282
Query: 279 YM-KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV-SVC 336
+ K L F M + ++P+ +TL SV+S+ L+G + G+ VHG+ ++ + S+
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+++Y G + E V + +++V+W ++IS Y + +A+ ++ M +
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T+AS +SAC G + LG ++H +RT +S + N+LIDMYSK +D A V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F+QI ++V++W S++ G N S EA+ F M + L+ N VT ++++ AC+ IG+L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
GK +H H L I D F AL+DMY +CG + A F + + R + +W+ ++ Y
Sbjct: 522 EKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G+ A F +M++S K N M + C
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 262/514 (50%), Gaps = 8/514 (1%)
Query: 65 SRLNELCL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S L CL NG + +AL+ M + + D ++++V C +H +++
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
M L L N+ L+M+ K GDL + +F K+ ++ SW +I Y + F ++AL
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMY 242
+ M G++P++ T VL +CG + ++ GK VH +R + + + ++ AL+ +Y
Sbjct: 291 FSEMI-KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+CG L V + R+ ++WN++IS Y G ++ L LF M + PD TL+
Sbjct: 350 AECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLA 409
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S ISA E G LG+++HG+VI+ SD+ V N LI MY G+ + VF++++ +
Sbjct: 410 SSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
VV+W +M+ + + +A+ + M +E+T +V+ AC+ +G+L+ G +H
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ +GL + LIDMY+KC ++ A VF + ++++SW+S+I ++ R
Sbjct: 529 HKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A+ F +M+ + KPN V +++LSAC G++ GK GV+ + +
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFI 647
Query: 542 DMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
D+ R G +K A+ D S W L+ G
Sbjct: 648 DLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 196/408 (48%), Gaps = 9/408 (2%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNA 135
E+AL+ M + I + L +++ C EG +H V + + L A
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ ++ + G L V + DR++ +WN LI YA G +AL L+++M +KP
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV-TQRIKP 403
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +T + C + GK++H HVIR +D V N+LI MY K G + A VF
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + R ++WN+M+ G+ +NG ++ + LF M ++ + +T +VI A +G +
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ VH +I G D+ LI MY G+ E VF M S+ +VSW++MI+ Y
Sbjct: 523 KGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ T+ M G+ P+E+ +VLSAC G+++ G L G+
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIP---DKNVISWTSIILGLRLNNR 480
ID+ S+ + +A ++P D +V W S++ G R++ +
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNGCRIHQK 687
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 4/283 (1%)
Query: 315 KLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+L ++H +++ G D LI+ Y G+ + VF D + +I C
Sbjct: 15 RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC 74
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGLIS 432
L D A++ Y + +E + + SVL ACA +L +G K+H ++ G+
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I +L+ MY + + A +VF +P +++++W++++ N +AL F+ M+
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ ++P++VT++S++ CA +G L + +H R D L N+LL MY +CG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ F +++ +W +++ Y A F +MI S
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 253/472 (53%), Gaps = 12/472 (2%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
FGD+ A VF + +F WN +I GY++ F +AL +Y M + V PD +TFP
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPH 124
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C G+ L+ G+ VH V R G++ADV V N LI +Y KC L AR VF+G+P +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 263 R--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R +SW A++S Y +NGE M+ L +F MR++ V PD++ L SV++A + D K GR +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+KMG + + L MY G + +F +M+S +++ W MIS Y +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+A++ + M + PD I+I S +SACA +G+L+ +++ R+ + I++ L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNS 499
IDM++KC ++ A VF + D++V+ W+++I+G L+ R+ EA+ +R M + PN
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN- 558
VT + +L AC G + G + ++D+ R G + A+
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 559 -SNERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ V+ W LL+ + E G+ A A++ F + G++ +L L+
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYA-AQQLFSIDPSNTGHYVQLSNLY 535
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 4/378 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H ++ G + ++ LI GD+ AR VFD +P+ WNA+I GY N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L+++ M+ V PD T ++ A + ++GR VH V ++GF DV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 337 NPLIKMYLSFGNREEGEKVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI +Y VF + + +VSWT ++S Y + P +A+E + M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD + + SVL+A CL +L G +H ++ GL + +L MY+KC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F ++ N+I W ++I G N + EA+ F +M+ +++P+++++ S +SACA++G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLT 572
+L + ++ + R D F+ +AL+DM+ +CG ++ A F+ +RDV W+ ++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 573 GYAERGQGALAEEFFRKM 590
GY G+ A +R M
Sbjct: 398 GYGLHGRAREAISLYRAM 415
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 8/446 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + AL +MQ + D +L++ C G ++H+ V + V +
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 133 GNAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N ++++ K LG A VF + +R + SW ++ YA+ G EAL ++ +M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
VKPD VL + DLK+G+ +H V++ G E + D++ +L TMY KCG +
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+++FD M + I WNAMISGY +NG + + +F M V PD ++++S ISA
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG + R ++ YV + + DDV + + LI M+ G+ E VF R +DVV W+ M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y +A+ Y+ ME G P+++T +L AC G + G +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFR 489
+ID+ + +D+A EV +P V W +++ + +R E +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK-KHRHVELGEYAA 514
Query: 490 KMMLNLKPNSV---TLVSILSACARI 512
+ + ++ P++ +S L A AR+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARL 540
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG +A+ M ++ D ++ + + C ++ ++ V +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + +A + MF K G + A VF + DRD+ W+ +I GY G EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+ M GGV P+ TF +L C ++ G + +I +
Sbjct: 412 YRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG-----YFENGEYMKGLMLFIMMREVLVDPD 297
+ G L +A V MP + ++ W A++S + E GEY + I DP
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI-------DPS 523
Query: 298 ----FMTLSSVISASEL 310
++ LS++ +A+ L
Sbjct: 524 NTGHYVQLSNLYAAARL 540
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 244/439 (55%), Gaps = 11/439 (2%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
++ LF WN+L+ AK+G F ++ L+++M GV+ D YTF CV ++ + + G+
Sbjct: 7 EKALF-WNILMNELAKSGDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGE 64
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H +++ G+ V N+L+ Y+K + AR VFD M +RD ISWN++I+GY NG
Sbjct: 65 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 124
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYVIKMGFSDDVS 334
KGL +F+ M ++ D T+ SV + S L+ LGR VH +K FS +
Sbjct: 125 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI---SLGRAVHSIGVKACFSREDR 181
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
CN L+ MY G+ + + VF M + VVS+T+MI+ Y L +AV+ ++ ME EG
Sbjct: 182 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 241
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD T+ +VL+ CA LD G ++H+ L I ++N L+DMY+KC + +A
Sbjct: 242 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 301
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARI 512
VF ++ K++ISW +II G N + EAL F ++ P+ T+ +L ACA +
Sbjct: 302 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 361
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
A G+EIH + +R G D + N+L+DMY +CG + A F+ +D+ +W +++
Sbjct: 362 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 421
Query: 572 TGYAERGQGALAEEFFRKM 590
GY G G A F +M
Sbjct: 422 AGYGMHGFGKEAIALFNQM 440
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 266/539 (49%), Gaps = 16/539 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +NEL +G ++ M + +D + + R G LH + K
Sbjct: 13 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 72
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GN+ ++ ++K + A VF +M +RD+ SWN +I GY G ++ LS+
Sbjct: 73 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 132
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M V G++ D+ T V C + G+ VH ++ + + N L+ MY
Sbjct: 133 FVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL A+ VF M R +S+ +MI+GY G + + LF M E + PD T+++
Sbjct: 192 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 251
Query: 304 VIS--ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
V++ A + DE G+ VH ++ + D+ V N L+ MY G+ +E E VFS M
Sbjct: 252 VLNCCARYRLLDE--GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIK 420
KD++SW T+I Y + ++A+ + ++ E PDE T+A VL ACA L D G +
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 369
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H MR G S +AN+L+DMY+KC + A +F I K+++SWT +I G ++
Sbjct: 370 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 429
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFL 536
EA+ F +M ++ + ++ VS+L AC+ G + G I H +I + +
Sbjct: 430 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 489
Query: 537 PNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DM R G + A+ +F N D + W LL G LAE+ K+ +
Sbjct: 490 --CIVDMLARTGDLIKAY-RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 176/342 (51%), Gaps = 2/342 (0%)
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + + WN +++ ++G++ + LF M V+ D T S V + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++HG+++K GF + SV N L+ YL + KVF M +DV+SW ++I+ Y
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ L +K + + M G D TI SV + CA + LG +H + ++
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
NTL+DMYSKC +D A VF ++ D++V+S+TS+I G + EA+ F +M
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ P+ T+ ++L+ CAR L GK +H + FD F+ NAL+DMY +CG M+ A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 554 WNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F+ +D+ +WN ++ GY++ A F +++ K
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 342
>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19220, mitochondrial; Flags: Precursor
Length = 951
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 280/543 (51%), Gaps = 26/543 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + NG ++L+Y SM D ++ C G LH +V K
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 124 T----MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ +H+SV GN+ +SM+ K GD A VF ++ RD+ S N ++ G+A G F+E
Sbjct: 318 SGYSPEAHVSV--GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNAL 238
A + +M V ++PD+ T + CG + + G+ VH + +R ++ ++V+N++
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-- 296
I MY KCG +A L+F RD +SWN+MIS + +NG K LF +EV+ +
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF---KEVVSEYSC 492
Query: 297 ---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
T+ +++++ + G+ VH ++ K+GF D++ N +I MY+ G R+
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYI--GCRDL-T 549
Query: 354 KVFSRM----ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSA 408
F R+ E++D+ SW ++IS S +++ +Q M EG + D IT+ +SA
Sbjct: 550 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 609
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
LG + G H LA+++ + NTLI MY +CK I+ A++VF I D N+ SW
Sbjct: 610 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 669
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I L N E FR L L+PN +T V +LSA ++G+ G + H H +R
Sbjct: 670 NCVISALSQNKAGREVFQLFRN--LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR 727
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFF 587
G + F+ AL+DMY CG ++ F NS +SAWN +++ + G G A E F
Sbjct: 728 GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELF 787
Query: 588 RKM 590
+++
Sbjct: 788 KEL 790
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 238/469 (50%), Gaps = 11/469 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NA ++++ K +L A VF M RD+ SWN ++ G ++L ++ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG-S 283
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLV 249
G + D TF CV+ C + +L G+ +H VI+ GY EA V V N++I+MY KCGD
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISAS 308
A VF+ + RD IS NA+++G+ NG + + + M+ V + PD T+ S+ S
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 309 ELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + GR VHGY ++M S + V N +I MY G + E +F +D+VSW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLA 425
+MIS + + KA ++ + +E S T+ ++L++C +L G +H
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEA 484
+ G ++ AN++I+MY C+ + A + + +++ SW S+I G + E+
Sbjct: 524 QKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLES 583
Query: 485 LIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L F+ M ++ + +TL+ +SA +G ++ G+ H A++ D L N L+
Sbjct: 584 LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 643
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY RC ++ A F ++ ++ +WN +++ ++ G + FR +
Sbjct: 644 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 692
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 252/534 (47%), Gaps = 13/534 (2%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHS- 119
+ N+ LN NG E+A L+ MQ ++ I D +V++ +C EG +H
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V M ++ + N+ + M+ K G A +F RDL SWN +I +++ GF +
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 180 ALSLYQRMFW-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A +L++ + K + T +L +C L GK VH + + G+ ++ N++
Sbjct: 479 AKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSV 538
Query: 239 ITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDP 296
I MY+ C DL A L + M + RD SWN++ISG +G +++ L F M RE +
Sbjct: 539 INMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 598
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ISAS +G GR HG IK D + N LI MY + E KVF
Sbjct: 599 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 658
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++ SW +IS + + + ++ ++ E P+EIT +LSA LG+
Sbjct: 659 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTS 715
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G++ H +R G + ++ L+DMYS C ++ ++VF ++ +W S+I
Sbjct: 716 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 775
Query: 477 LNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFD 533
+ +A+ F+++ N ++PN + +S+LSAC+ G + G + + GV
Sbjct: 776 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 835
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEE 585
++DM R G+++ A+ + W LL+ G L +E
Sbjct: 836 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKE 889
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 214/415 (51%), Gaps = 10/415 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VLR+ + + + VH ++ G D+ + L+T Y + G+LV + +FD + ++D
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WN+MI+ +NG Y+ + LFI M + D TL SA + + +H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
I+ G D S+CN L+ +Y N E VF+ ME +D+VSW T+++ + P K
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTL 440
+++ ++ M G D +T + V+SAC+ + L LG LH L +++G +++ + N++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPN 498
I MYSKC + A VF ++ ++VIS +I+ G N EA +M ++P+
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQF 557
T+VSI S C + G+ +H + +R+ + + N+++DMY +CG A F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 558 -NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID----SKGNWRKLMGLFRKC 607
+ RD+ +WN +++ +++ G A+ F++++ SK + ++ + C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 226/464 (48%), Gaps = 10/464 (2%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ + + G+L + +F ++ ++D+ WN +I + G + A+ L+ M G +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EF 186
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T + ++ +H I G D + NAL+ +Y K +L A VF
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M RD +SWN +++ NG K L F M + D +T S VISA + +
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 316 LGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG +HG VIK G+S + VSV N +I MY G+ E E VF + +DV+S +++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + + ++A QM + PD T+ S+ S C L G +H +R + S
Sbjct: 367 FAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 433 YII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N++IDMY KC +A +F ++++SW S+I N + +A F+++
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 492 MLNL---KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ K + T+++IL++C +L+ GK +H ++G + N++++MY+ C
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCR 546
Query: 549 RMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A+ + S RD+++WN +++G A G + F+ M
Sbjct: 547 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM 590
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ FM L V+ + + + + R VH + +K G D++ + L+ Y G
Sbjct: 83 MESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSS 142
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F ++ KDV+ W +MI+ + AV + M +G+ D T+ SA + L
Sbjct: 143 CLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLH 202
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LH LA+ TGL+ + N L+++Y+K + + A VF + ++++SW +I+
Sbjct: 203 LSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT 262
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N ++L +F+ M + ++VT ++SAC+ I L G+ +H ++ G +
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 533 DGFLP--NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
+ + N+++ MY +CG + A F RDV + N +L G+A G + EE F
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG---MFEEAF 377
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 264/520 (50%), Gaps = 13/520 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + +A Y M + + + ++ C R D ++ V + +
Sbjct: 205 NGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAD---LVYGNVVEAEWETDTMV 261
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++MF K G L A VF +M D+ SWN ++ A+ GF EAL L++RM
Sbjct: 262 ANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRM--PSE 319
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V D T L TC L+ GK +H V R G E DV AL+TMY +CGDL AR
Sbjct: 320 VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEAR 379
Query: 253 LVFDGMPKRDRISWNAMISGYFENGE-YMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFDG+ ++ +SWN MI+ Y + + + L +F +M V P T +V+SA E
Sbjct: 380 RVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVEC- 438
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ +G+++HG+++ G D + + L+ MY G+ + +VF ++ +DV +W ++
Sbjct: 439 --QSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIV 496
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
G P +A+E + M EG+ + T LSA + + G KLH L +GL
Sbjct: 497 GVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVS-PDRVSYGRKLHGLIAESGLE 555
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +AN LI MY++CK ++ A F ++ DK+++SWTS+I EA+ F++M
Sbjct: 556 ADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM 615
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L+P+ VT ++L AC + A GK +H+ A +G+ + F+ AL+ M+ + G +
Sbjct: 616 --ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLG 673
Query: 552 PAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
A F + E ++ WN +L GYA+ G +FF M
Sbjct: 674 EARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAM 713
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 245/501 (48%), Gaps = 14/501 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + LV LC ++ E ++S + L G + + MF+K + A VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M DR + W ++ + D A + RM + GV PD TF +L C L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRM-QLEGVLPDRVTFISILNAC---ESL 142
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+G+ VH ++ E+DV + NAL+ M KC DL A F MP+RD ISW M++ Y
Sbjct: 143 AQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAY 202
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
NG + ++ M V P+ +T +V++A D L V+G V++ + D
Sbjct: 203 ARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADL---VYGNVVEAEWETDT 259
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N I M+ G + VF RM+ DV SW M++ +A+E ++ M +E
Sbjct: 260 MVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE 319
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
++ D+ T+ LS CA +L+ G +H R GL + ++ L+ MYS+C + +A
Sbjct: 320 VAV-DKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEA 378
Query: 454 LEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
VF I KNV+SW ++I R + AL FR M+L+ ++P T ++++SA
Sbjct: 379 RRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSA--- 435
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ GK++H + G+ D F+ +AL++MY R G + A F ERDV AWN +
Sbjct: 436 VECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAI 495
Query: 571 LTGYAERGQGALAEEFFRKMI 591
+ GQ A E+F +M+
Sbjct: 496 VGVCVGHGQPREALEWFSRML 516
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 255/520 (49%), Gaps = 19/520 (3%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+++A + MQ + D ++++ CE +G +H ++ V +GNA
Sbjct: 110 VDRAWLFFFRMQLEGVLPDRVTFISILNACE---SLAQGELVHRLIVDKNLESDVVIGNA 166
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M K DL A F +M RD+ SW ++ YA+ G EA Y RM + GV P
Sbjct: 167 LMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRML-LEGVVP 225
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ TF VL C D V+ +V+ +E D V NA I M+ KCG L RA VF
Sbjct: 226 NNITFLAVLAACSSARD---ADLVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVF 282
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM-REVLVDPDFMTLS-SVISASELVGD 313
M + D SWNAM++ ++G + L LF M EV VD + ++ S +A E + D
Sbjct: 283 HRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLED 342
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H V ++G DV L+ MY G+ E +VF + K+VVSW MI+
Sbjct: 343 ---GKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA 399
Query: 374 Y-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L +A+E +++M +G P T +V+SA C +G +LH + TGL S
Sbjct: 400 YGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVEC---QSVGKQLHGWIVDTGLYS 456
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + L++MY + + A VF +I +++V +W +I+ + + EAL +F +M+
Sbjct: 457 DSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRML 516
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L N T + LSA + + G+++H G+ D + NAL+ MY RC ++
Sbjct: 517 LEGASGNRATFLLALSAVSP-DRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLE 575
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A N F+ ++ + +W ++ + G A + F++M
Sbjct: 576 DARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM 615
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 206/414 (49%), Gaps = 9/414 (2%)
Query: 181 LSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L L+QR F V D F ++ C L V+ + G D +++
Sbjct: 11 LQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVV 70
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
M++KC + A VF+ M R + W +M++ + ++ + + + F M+ V PD +
Sbjct: 71 RMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRV 130
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T S+++A E + +L VH ++ DV + N L+KM + + + F RM
Sbjct: 131 TFISILNACESLAQGEL---VHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRM 187
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DV+SWT M++ Y + +A Y M EG +P+ IT +VL+AC+ + DL
Sbjct: 188 PRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADL-- 245
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++ + + ++AN I+M+SKC C+D+A +VFH++ +V SW +++ L +
Sbjct: 246 -VYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHG 304
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S EAL FR+M + + TLV LS CA +L GK IH+ R+G+ D A
Sbjct: 305 FSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTA 364
Query: 540 LLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA-ERGQGALAEEFFRKMI 591
L+ MY RCG + A F+ ++V +WN ++ Y + + A E FR M+
Sbjct: 365 LVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLML 418
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 184/372 (49%), Gaps = 17/372 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH + T + +G+A ++M+ + G LG A VF K+ +RD+F+WN ++G
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADV 232
G EAL + RM + G + TF L PD + G+++H + G EAD
Sbjct: 502 HGQPREALEWFSRML-LEGASGNRATFLLALSAVS--PDRVSYGRKLHGLIAESGLEADN 558
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+V NALI+MY +C L AR FD + + +SW ++I+ + G + + LF M
Sbjct: 559 NVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME-- 616
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
++PD +T ++V+ A +V + G+ VH ++G +V V LI M+ FGN E
Sbjct: 617 -LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEA 675
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F +E+ + W M+ Y + ++ + M+ G PD IT +V+SAC+
Sbjct: 676 RRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHA 735
Query: 413 GNLDLGIKLH-----QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
G ++ G + + GL Y LID+ ++ +++A + +P + +
Sbjct: 736 GLVEKGARTFASMGPDYGVGHGLEDY----GCLIDLLARAGQLEEAYDFLQGMPCGPSDV 791
Query: 467 SWTSIILGLRLN 478
+W +++ ++
Sbjct: 792 TWKTLLAACKIQ 803
>gi|195615078|gb|ACG29369.1| pentatricopeptide repeat protein PPR1106-17 [Zea mays]
gi|414868049|tpg|DAA46606.1| TPA: pentatricopeptide repeat protein PPR1106-17 [Zea mays]
Length = 618
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 270/499 (54%), Gaps = 10/499 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +A+ +R C +R D H+V +++ L V + N +S +V+F ++ +A VF
Sbjct: 91 DAEAVAFWLRFC--RRELDV-RRAHAVALRSLGSLGVFVSNNLISAYVRFDEVANARKVF 147
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M +R + SW ++ GY K G E L M + GV+ + TF C+L++CG D
Sbjct: 148 DEMPERSIVSWTAMMNGYQKLGCHGEVARLLMDML-IAGVQGNSLTFVCLLKSCGERCDA 206
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G++VH V++ G+ ++V V +A+ Y +CGD+ A VFD M RD ISW MI+ Y
Sbjct: 207 RLGQQVHCCVVKGGW-SNVIVDSAITHFYAQCGDVAAASTVFDRMASRDVISWTTMITAY 265
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++G K L +F M P+ T+ S + A + G+++HG ++K + D+
Sbjct: 266 VQHGHSDKALQMFPTMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKKLYKYDI 325
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+ MY G + + VF +M ++ ++WT+MIS Y S ++AV ++ M+
Sbjct: 326 HVGSALVTMYARCGEVFDAQTVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMKMR 385
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+ +TI S+LSAC + ++ G +LH ++ + + I +TL+ Y++ A
Sbjct: 386 RVFVNHLTIVSLLSACGSMQSIYHGKELHAQIIKNCMEENLQIGSTLVWFYNRRGEHTYA 445
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+ +PD++ ++WT++I G + EAL +M+ + + PN+ T S L ACAR+
Sbjct: 446 TRILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEMLWDGVVPNTYTYSSALKACARL 505
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
AL G+ IH + + F+ +L+DMY+RCG++ A F++ E ++ W +++
Sbjct: 506 EALQDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVMI 565
Query: 572 TGYAERGQGALAEEFFRKM 590
TG+ + G+ +EE + M
Sbjct: 566 TGFTQNGR---SEEALKYM 581
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 209/383 (54%), Gaps = 2/383 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + +A + + GD+ A VF +M RD+ SW +I Y + G D+AL ++ M
Sbjct: 223 NVIVDSAITHFYAQCGDVAAASTVFDRMASRDVISWTTMITAYVQHGHSDKALQMFPTMV 282
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G +P+ +T L+ C L+ GK++H +++ Y+ D+ V +AL+TMY +CG++
Sbjct: 283 -SEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKKLYKYDIHVGSALVTMYARCGEV 341
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+ VFD MP+R+ I+W +MISGY ++G + ++LF M+ V + +T+ S++SA
Sbjct: 342 FDAQTVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMKMRRVFVNHLTIVSLLSAC 401
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+E+H +IK +++ + + L+ Y G ++ M +D V+WT
Sbjct: 402 GSMQSIYHGKELHAQIIKNCMEENLQIGSTLVWFYNRRGEHTYATRILEAMPDRDAVAWT 461
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MIS Y +A+++ M +G +P+ T +S L ACA L L G ++H + +T
Sbjct: 462 AMISGYNNLGHNVEALKSLDEMLWDGVVPNTYTYSSALKACARLEALQDGRRIHGVVNKT 521
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF- 487
S + + +LIDMY +C +D+A VF +P+ N+++W +I G N RS EAL +
Sbjct: 522 QAFSNVFVGCSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVMITGFTQNGRSEEALKYM 581
Query: 488 FRKMMLNLKPNSVTLVSILSACA 510
F + L ++LS+C
Sbjct: 582 FLMQQEGYVVDEFVLSTVLSSCG 604
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 6/399 (1%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD LR C D++R H +R V V N LI+ YV+ ++ AR V
Sbjct: 90 PDAEAVAFWLRFCRRELDVRRA---HAVALRSLGSLGVFVSNNLISAYVRFDEVANARKV 146
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD MP+R +SW AM++GY + G + + L + M V + +T ++ + D
Sbjct: 147 FDEMPERSIVSWTAMMNGYQKLGCHGEVARLLMDMLIAGVQGNSLTFVCLLKSCGERCDA 206
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LG++VH V+K G+S +V V + + Y G+ VF RM S+DV+SWTTMI+ Y
Sbjct: 207 RLGQQVHCCVVKGGWS-NVIVDSAITHFYAQCGDVAAASTVFDRMASRDVISWTTMITAY 265
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
DKA++ + M +EG P+E T+ S L ACA L G +LH ++ I
Sbjct: 266 VQHGHSDKALQMFPTMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKKLYKYDI 325
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ + L+ MY++C + A VF ++P +N I+WTS+I G + EA++ FRKM M
Sbjct: 326 HVGSALVTMYARCGEVFDAQTVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMKMR 385
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ N +T+VS+LSAC + ++ GKE+HA ++ + + + + L+ Y R G A
Sbjct: 386 RVFVNHLTIVSLLSACGSMQSIYHGKELHAQIIKNCMEENLQIGSTLVWFYNRRGEHTYA 445
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +RD AW +++GY G A + +M+
Sbjct: 446 TRILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEML 484
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 176/338 (52%), Gaps = 1/338 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++AL+ +M +E + + ++ C ++ G LH + K + + +
Sbjct: 268 HGHSDKALQMFPTMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKKLYKYDIHV 327
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF KM R+ +W +I GYA++G +EA+ L+++M +
Sbjct: 328 GSALVTMYARCGEVFDAQTVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKM-KMRR 386
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + + GKE+H +I+ E ++ + + L+ Y + G+ A
Sbjct: 387 VFVNHLTIVSLLSACGSMQSIYHGKELHAQIIKNCMEENLQIGSTLVWFYNRRGEHTYAT 446
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ++W AMISGY G ++ L M V P+ T SS + A +
Sbjct: 447 RILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEMLWDGVVPNTYTYSSALKACARLE 506
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR +HG V K +V V LI MY+ G +E +VF M ++V+W MI+
Sbjct: 507 ALQDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVMIT 566
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ + ++A++ +M+ EG + DE +++VLS+C
Sbjct: 567 GFTQNGRSEEALKYMFLMQQEGYVVDEFVLSTVLSSCG 604
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+A+ M+ + V+ +V+L+ C + G LH+ + K ++++
Sbjct: 369 SGCGEEAVLLFRKMKMRRVFVNHLTIVSLLSACGSMQSIYHGKELHAQIIKNCMEENLQI 428
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+ + + + G+ +A + M DRD +W +I GY G EAL M W G
Sbjct: 429 GSTLVWFYNRRGEHTYATRILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEMLW-DG 487
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ YT+ L+ C + L+ G+ +H V + ++V V +LI MY++CG + AR
Sbjct: 488 VVPNTYTYSSALKACARLEALQDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEAR 547
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLSSVISASELV 311
VFD MP+ + ++W MI+G+ +NG + L +F+M +E V +F+ LS+V+S+
Sbjct: 548 RVFDAMPEHNLVTWKVMITGFTQNGRSEEALKYMFLMQQEGYVVDEFV-LSTVLSS---C 603
Query: 312 GDEKLGREVHGYVIK 326
GD +L + ++++
Sbjct: 604 GDFQLKSDRISFIVQ 618
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 260/483 (53%), Gaps = 12/483 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR--DLFSWNVLIGGYAKA 174
LH +++ V + +++ +L A +VF KM R ++ WN+LI YA
Sbjct: 39 LHRTHETNLTNFDVPF-EKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWN 97
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G ++EA+ LY +M G+ P+ +TFP VL+ C + + G+E+H + R E++V V
Sbjct: 98 GPYEEAIDLYYKMLGY-GITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYV 156
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY-FENGEYMKGLMLFIMMREVL 293
AL+ Y KCG L A+ VFD M KRD ++WN+MISG+ G Y + L + M+
Sbjct: 157 STALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND- 215
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T+ V+ A V + G+E+HG+ ++ GF DV V ++ +Y +
Sbjct: 216 VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYAR 275
Query: 354 KVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETY---QMMEAEGSMPDEITIASVLSAC 409
++F M K+ V+W+ M+ Y +A+E + M++ + + +T+A+V+ C
Sbjct: 276 RIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVC 335
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L +L G LH A+++G + +++ NTL+ MY+KC I+ A+ F+++ ++ +S+T
Sbjct: 336 ANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFT 395
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+II G N S E L F +M L+ + P TL S+L ACA + L G H +A+
Sbjct: 396 AIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIIC 455
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G D + NAL+DMY +CG++ A F+ ++R + +WN ++ Y G G A F
Sbjct: 456 GFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLF 515
Query: 588 RKM 590
M
Sbjct: 516 DNM 518
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 265/546 (48%), Gaps = 17/546 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A+ M I + +++ C + EG +H + + +V +
Sbjct: 97 NGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYV 156
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA-KAGFFDEALSLYQRMFWVG 191
A + + K G L A VF KM RD+ +WN +I G++ G +DE L +M
Sbjct: 157 STALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM--QN 214
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P+ T VL V L+ GKE+H +R G+ DV V ++ +Y KC + A
Sbjct: 215 DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYA 274
Query: 252 RLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISA 307
R +FD M ++ ++W+AM+ Y + L LF +M+++ ++ +TL++VI
Sbjct: 275 RRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRV 334
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ D G +H Y IK GF D+ V N L+ MY G + F+ M+ +D VS+
Sbjct: 335 CANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSF 394
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T +IS Y + ++ + + M+ G P++ T+ASVL ACA L L G H A+
Sbjct: 395 TAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAII 454
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + +I N LIDMY+KC ID A +VF ++ + ++SW ++I+ ++ EAL+
Sbjct: 455 CGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLL 514
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYV 545
F M LKP+ VT + ++SAC+ G + GK +A G+ ++D+
Sbjct: 515 FDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLS 574
Query: 546 RCGRMKPAWNQFNSN--ERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWR 598
R G K + E DV W LL+ E G+G ++++ + +S GN+
Sbjct: 575 RAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEG-VSKKIQKLGPESTGNFV 633
Query: 599 KLMGLF 604
L ++
Sbjct: 634 LLSNMY 639
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 23/407 (5%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVN------ALITMYVKCGDLVRARLVF 255
+L +C L RGK +H H+++ + + ++ N L+ +Y+ C +L AR VF
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 256 DGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
D MP R + + WN +I Y NG Y + + L+ M + P+ T V+ A + +
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-- 371
GRE+H + ++ +V V L+ Y G ++ ++VF +M +DVV+W +MI
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194
Query: 372 -SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
S +EGS D+ M+ + S P+ TI VL A A + +L G ++H +R G
Sbjct: 195 FSLHEGSY--DEVARLLVQMQNDVS-PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFR 489
+ +++ ++D+Y KC+CID A +F + KN ++W++++ + + EAL F
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 490 KMMLNLKPN-----SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
++++ LK + +VTL +++ CA + L G +H +A++ G D + N LL MY
Sbjct: 312 QLLM-LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMY 370
Query: 545 VRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A FN + RD ++ +++GY + G F +M
Sbjct: 371 AKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM 417
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 206/423 (48%), Gaps = 13/423 (3%)
Query: 64 NSRLNELCLN-GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS ++ L+ GS ++ + L MQ ++ + +V ++ G +H
Sbjct: 189 NSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCV 247
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEAL 181
+ V +G L ++ K + +A +F M ++ +W+ ++G Y F EAL
Sbjct: 248 RRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREAL 307
Query: 182 SLYQRMFWVGGVKPDV-----YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
L+ ++ + K DV T V+R C + DL G +H + I+ G+ D+ V N
Sbjct: 308 ELFCQLLML---KDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGN 364
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L++MY KCG + A F+ M RD +S+ A+ISGY +NG +GL +F+ M+ ++P
Sbjct: 365 TLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINP 424
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ TL+SV+ A + G H Y I GF+ D +CN LI MY G + KVF
Sbjct: 425 EKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVF 484
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM + +VSW TMI Y + +A+ + M++EG PD++T ++SAC+ G +
Sbjct: 485 DRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVA 544
Query: 417 LGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
G + + G+I + ++D+ S+ + ++P + +V W +++
Sbjct: 545 EGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604
Query: 475 LRL 477
R+
Sbjct: 605 CRV 607
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 505 ILSACARIGALMCGKEIHAHALR-IGVAFDGFLPN------ALLDMYVRCGRMKPAWNQF 557
+L +C + +L GK IH H L+ + + L N L+D+Y+ C +K A + F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 558 NS---NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++V WN+L+ YA G A + + KM+
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML 111
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 265/496 (53%), Gaps = 6/496 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + K L + ++ G LGHA VF + + N +I G+ +
Sbjct: 66 IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
E L+ RM ++ + YT L+ C + D + G E+ +R G+ + V +
Sbjct: 126 HMEVPRLF-RMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+++ VK G L A+ VFDGMP++D + WN++I GY + G + + + +F+ M + P
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+T+++++ A G +K+G H YV+ +G +DV V L+ MY + G+ VF
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVF 304
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M S+ ++SW MIS Y + + ++ ++ + GS D T+ S++ C+ +L+
Sbjct: 305 DSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLE 364
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G LH +R L S+++++ ++DMYSKC I +A VF ++ KNVI+WT++++GL
Sbjct: 365 NGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N + +AL F +M + NSVTLVS++ CA +G+L G+ +HAH +R G AFD
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ +AL+DMY +CG++ A FN+ + +DV N ++ GY G G A + +MI+
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544
Query: 594 --KGNWRKLMGLFRKC 607
K N + L C
Sbjct: 545 RLKPNQTTFVSLLTAC 560
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 223/430 (51%), Gaps = 4/430 (0%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
HL + +G++ ++ VK G L A VF M ++D+ WN +IGGY + G F E++ ++
Sbjct: 177 HLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLE 236
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M GG++P T +L+ CG K G H +V+ G DV V+ +L+ MY G
Sbjct: 237 MIG-GGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLG 295
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D A LVFD M R ISWNAMISGY +NG + LF + + D TL S+I
Sbjct: 296 DTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIR 355
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
D + GR +H +I+ + + ++ MY G ++ VF RM K+V++
Sbjct: 356 GCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVIT 415
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT M+ + + A++ + M+ E + +T+ S++ CA LG+L G +H +
Sbjct: 416 WTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFI 475
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFH-QIPDKNVISWTSIILGLRLNNRSFEAL 485
R G +I + LIDMY+KC I A ++F+ + K+VI S+I+G ++ AL
Sbjct: 476 RHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYAL 535
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDM 543
+ +M+ LKPN T VS+L+AC+ G + GK + H+ V L+D+
Sbjct: 536 GVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDL 595
Query: 544 YVRCGRMKPA 553
+ R GR++ A
Sbjct: 596 HSRAGRLEEA 605
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 184/373 (49%), Gaps = 15/373 (4%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN------AFLSMFVKFGDLGHAW 150
+ NL++ C G+ HS V L++ +GN + + M+ GD G A
Sbjct: 248 TMANLLKACGQSGLKKVGMCAHSYV------LALGMGNDVFVLTSLVDMYSNLGDTGSAA 301
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
VF MC R L SWN +I GY + G E+ +L++R+ G D T ++R C
Sbjct: 302 LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGS-GFDSGTLVSLIRGCSQT 360
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
DL+ G+ +H +IR E+ + + A++ MY KCG + +A +VF M K++ I+W AM+
Sbjct: 361 SDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAML 420
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
G +NG L LF M+E V + +TL S++ +G GR VH + I+ G++
Sbjct: 421 VGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYA 480
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D + + LI MY G EK+F+ KDV+ +MI Y A+ Y
Sbjct: 481 FDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSR 540
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCK 448
M E P++ T S+L+AC+ G ++ G L H + + L+D++S+
Sbjct: 541 MIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAG 600
Query: 449 CIDKALEVFHQIP 461
+++A E+ Q+P
Sbjct: 601 RLEEADELVKQMP 613
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 192/395 (48%), Gaps = 4/395 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H +I+ + + LI +Y G L AR VFD + NAMI+G+ N
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
++M+ LF MM ++ + T + A + D+++G E+ ++ GF + V
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ ++ + G + +KVF M KDVV W ++I Y L ++++ + M G
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P +T+A++L AC G +G+ H + G+ + + + +L+DMYS A V
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGAL 515
F + +++ISW ++I G N E+ FR+++ + +S TLVS++ C++ L
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+ +H+ +R + L A++DMY +CG +K A F +++V W +L G
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423
Query: 575 AERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
++ G A + F +M + K N L+ L C
Sbjct: 424 SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCC 458
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 2/258 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG + ++ + + D LV+L+R C + G LHS + +
Sbjct: 316 NAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR 375
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L A + M+ K G + A VFG+M +++ +W ++ G ++ G+ ++AL L
Sbjct: 376 KELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKL 435
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M V + T ++ C + L +G+ VH H IR GY D + +ALI MY
Sbjct: 436 FCQM-QEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYA 494
Query: 244 KCGDLVRARLVFDG-MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + A +F+ +D I N+MI GY +G L ++ M E + P+ T
Sbjct: 495 KCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFV 554
Query: 303 SVISASELVGDEKLGREV 320
S+++A G + G+ +
Sbjct: 555 SLLTACSHSGLVEEGKAL 572
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 302/581 (51%), Gaps = 28/581 (4%)
Query: 22 KTRIPET--SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQA 79
+T + T SFY K H++ K + N +++ + + GS+ +A
Sbjct: 82 QTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKY--------GSVSKA 133
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
+ + M+ + +E+ L+R C + + GL +H ++ + G++ + M
Sbjct: 134 FEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYM 193
Query: 140 FVKFGD-LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
++K GD L A VF + +RD+ +WNV+I G+A+ G F L+ M+ G+KPD
Sbjct: 194 YLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRI 253
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF +L+ C + ++ ++H V +FG E DV V +A++ +Y KC D+ R +FD M
Sbjct: 254 TFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSM 310
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
K+D W++MISGY N + + F M V D LSS + A + D G
Sbjct: 311 EKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGV 370
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VHG +IK G +D V + L+ +Y SFG + EK+FSR++ KD+V+W +MI
Sbjct: 371 QVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMIL---AQA 427
Query: 379 LPDKA----VETYQMMEAEGSMPDE-ITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
P + ++ +Q + + + T+ +VL +C +L G ++H L +++ L +
Sbjct: 428 RPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRH 487
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++ N L+ MYS+CK ID A + F I K+ SW+SII + N +AL ++M+
Sbjct: 488 TLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLD 547
Query: 493 --LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+N S+ L +SAC+++ + GK++H A++ G + D ++ ++++DMY +CG +
Sbjct: 548 EGINFTSYSLPLC--ISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNI 605
Query: 551 KPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + F+ + + +N +++GYA G+ A E K+
Sbjct: 606 EESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKL 646
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 250/529 (47%), Gaps = 18/529 (3%)
Query: 73 NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG + M +E + D +L++ C +E + +H +V K + + V
Sbjct: 229 NGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSV---LNEVMQIHGIVYKFGAEVDVV 285
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ +A + ++ K D+ +F M +D F W+ +I GY +EA++ ++ M
Sbjct: 286 VESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDM-CRQ 344
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
VK D + L+ C + DL G +VH +I+ G++ D V + L+ +Y G+L
Sbjct: 345 RVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDV 404
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI--MMREVLVDPDFMTLSSVISASE 309
+F + +D ++WN+MI G+ M + R + TL +V+ + E
Sbjct: 405 EKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCE 464
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D GR++H ++K V N L+ MY ++ K F + KD SW++
Sbjct: 465 KDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSS 524
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I + + + KA+E + M EG ++ +SAC+ L + G +LH A+++G
Sbjct: 525 IIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSG 584
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ I +++IDMY+KC I+++ +VF + N +++ +II G + ++ +A+
Sbjct: 585 YSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLS 644
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDM 543
K+ N + PN VT ++++SAC+ G + E +H + + P + L+D
Sbjct: 645 KLEKNGVAPNHVTFLALMSACSHAGYV----EETSHLFTLMLDKYKIKPKSEHYSCLVDA 700
Query: 544 YVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
Y R GR++ A+ Q + SAW LL+ + E+ KMI+
Sbjct: 701 YGRAGRLEEAY-QIVQKDGSESAWRTLLSACRNHSNRKIGEKSAMKMIE 748
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 187/372 (50%), Gaps = 7/372 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L + ++H +I Y + + N L++ Y K + A +FD MP R+ ++W +IS
Sbjct: 64 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ + G K +F MR P+ T + ++ A +G ++HG +++ G +
Sbjct: 124 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLERE 183
Query: 333 VSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMM 390
+ L+ MYL G+ + +VF + +DVV+W MIS + + + +M
Sbjct: 184 KFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMW 243
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
E +G PD IT AS+L C+ L + +++H + + G +++ + ++D+Y+KC+ +
Sbjct: 244 EEQGLKPDRITFASLLKCCSVLNEV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDV 300
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
++F + K+ W+S+I G +NNR EA+ FF+ M +K + L S L AC
Sbjct: 301 SSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKAC 360
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
I L G ++H ++ G D F+ + LL++Y G + F+ +++D+ AWN
Sbjct: 361 VEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWN 420
Query: 569 ILLTGYAERGQG 580
++ A GQG
Sbjct: 421 SMILAQARPGQG 432
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 198/419 (47%), Gaps = 12/419 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S ++ +N E+A+ + M + +D+ L + ++ C + G+ +H ++ K
Sbjct: 319 SSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIK 378
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-FDEALS 182
+ + L+++ FG+LG +F ++ D+D+ +WN +I A+ G +
Sbjct: 379 NGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQ 438
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+Q + ++ T VL++C DL G+++H +++ V NAL+ MY
Sbjct: 439 LFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMY 498
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+C + A F + ++D SW+++I +N K L L M + ++ +L
Sbjct: 499 SECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLP 558
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
ISA + G+++H + IK G+S DV + + +I MY GN EE EKVF
Sbjct: 559 LCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKP 618
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+ V++ +IS Y +A+E +E G P+ +T +++SAC+ G ++ L
Sbjct: 619 NEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLF 678
Query: 423 QLAMRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
L L Y I + L+D Y + +++A ++ + D + +W +++ R
Sbjct: 679 TLM----LDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACR 731
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +I + + N L+ Y N K+F +M +++VV+WTT+IS +
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
KA E + M P+E T A +L AC +G+++H L +R GL +
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188
Query: 439 TLIDMYSK-CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNL 495
+L+ MY K + AL VF+ + +++V++W +I G N F +M L
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGL 248
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KP+ +T S+L C+ + +M +IH + G D + +A++D+Y +C +
Sbjct: 249 KPDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRK 305
Query: 556 QFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+S E +D W+ +++GY +G A FF+ M
Sbjct: 306 IFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDM 341
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H + T IS +ANTL+ YSK A ++F ++P++NV++WT++I
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 480 RSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+A F M + + +PN T +L AC G +IH +R G+ + F +
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188
Query: 539 ALLDMYVRCGR-MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+L+ MY++ G ++ A F ERDV AWN++++G+A+ G + + F +M + +G
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQG 247
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 274/528 (51%), Gaps = 24/528 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNL---------VRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+AL+ MQ VD+ +++NL V C+ GY VV +++ +
Sbjct: 183 EALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGY--------VVRRSICGV 234
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ N+ + M+ K GD+ A VF +M RD SW ++ GY K G + E L L +M
Sbjct: 235 ---VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM- 290
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G VK + L + DL++GKE++ + ++ G +D+ V ++ MY KCG+L
Sbjct: 291 RRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGEL 350
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+AR +F + RD ++W+A +S E G + L +F +M+ + PD LS ++S
Sbjct: 351 KKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGC 410
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + LG+ +H Y IK D+S+ L+ MY+ F +F+RM+ KD+V W
Sbjct: 411 TEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWN 470
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T+I+ + P A+E + ++ G +PD T+ + SACA + +LDLG LH ++
Sbjct: 471 TLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKS 530
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIF 487
G S I + L+DMY+KC + +F K+ +SW +I G N S EA+
Sbjct: 531 GFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAIST 590
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
FR+M L N++PN VT V+IL A + + L H +R+G + N+L+DMY +
Sbjct: 591 FRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAK 650
Query: 547 CGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG+++ + F+ E +D +WN +L+ YA GQG LA F M +S
Sbjct: 651 CGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQES 698
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 274/545 (50%), Gaps = 11/545 (2%)
Query: 54 NTSSIATKNP-----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK 108
+T + KNP NS + +A+ ++ ++ + D+ +++ C
Sbjct: 53 HTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSA 112
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ EG+ ++ + V +G + + MF K G L +A VF KM +D WN +I
Sbjct: 113 LDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMI 172
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G +++ EAL ++ RM + G + D + + + D+ K +H +V+R
Sbjct: 173 SGLSQSLNPCEALEMFWRM-QMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSI 231
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
V N+LI MY KCGD+ A+ VFD M RD +SW M++GY +NG Y +GL L
Sbjct: 232 CGVVS--NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHK 289
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MR V + + + + + + D + G+E++ Y ++MG D+ V P++ MY G
Sbjct: 290 MRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGE 349
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
++ ++F +E +D+V+W+ +S + P + + +Q+M+ EG PD+ ++ ++S
Sbjct: 350 LKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSG 409
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C + N+ LG +H A++ + S I + TL+ MY + + A+ +F+++ K+++ W
Sbjct: 410 CTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVW 469
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
++I G AL F ++ L+ + P+S T+V + SACA + L G +H +
Sbjct: 470 NTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEK 529
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAERGQGALAEE 585
G D + AL+DMY +CG + F + +D +WN+++ GY G A
Sbjct: 530 SGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAIS 589
Query: 586 FFRKM 590
FR+M
Sbjct: 590 TFRRM 594
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 242/455 (53%), Gaps = 7/455 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG--LYLHSVVSKTMSHLSV 130
NG + L+ L M+ N+ +++ A+VN + + R ++G +Y +++ MS + V
Sbjct: 277 NGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVV 336
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ M+ K G+L A +F + RDL +W+ + + G+ E LS++Q M +
Sbjct: 337 --ATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQY- 393
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G+KPD ++ C + ++ GK +H + I+ E+D+ +V L++MY++
Sbjct: 394 EGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTY 453
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F+ M +D + WN +I+G+ + G+ L +F ++ + PD T+ + SA +
Sbjct: 454 AMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAI 513
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTT 369
+ D LG +HG + K GF D+ V L+ MY G+ E++F + KD VSW
Sbjct: 514 MDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNV 573
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI+ Y + ++A+ T++ M+ E P+ +T ++L A + L L + H +R G
Sbjct: 574 MIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMG 633
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+S +I N+LIDMY+KC + + + FH++ +K+ ISW +++ ++ + A+ F
Sbjct: 634 FLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFS 693
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
M N++ +SV+ +S+LSAC G + G +I A
Sbjct: 694 VMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFA 728
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 159/344 (46%), Gaps = 2/344 (0%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L+ L G + L MQ + D+ L LV C G +H K
Sbjct: 372 LSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADM 431
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ + +SM+++F +A +F +M +D+ WN LI G+ K G AL ++ R
Sbjct: 432 ESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNR 491
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ + G+ PD T + C + DL G +H + + G+E+D+ V AL+ MY KCG
Sbjct: 492 L-QLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCG 550
Query: 247 DLVRA-RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L RL +D +SWN MI+GY NG + + F M+ V P+ +T +++
Sbjct: 551 SLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTIL 610
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + + H +I+MGF + N LI MY G EK F ME+KD +
Sbjct: 611 PAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTI 670
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
SW M+S Y + AV + +M+ D ++ SVLSAC
Sbjct: 671 SWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSAC 714
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 261/520 (50%), Gaps = 3/520 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G AL + M + D+ +V+ C + G +H V+ V +G
Sbjct: 37 GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + ++ + G L A Y+F + +D WNV++ GY K G A+ ++ M +
Sbjct: 97 SSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEI 155
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ TF CVL C L G ++H + G E D V N L+ MY KC L AR
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARK 215
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD P+ D +SWN +ISGY +NG + LF M + PD +T +S + +
Sbjct: 216 LFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLS 275
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K +E+HGY+I+ DV + + LI +Y + E +K+ + S D V TTMIS
Sbjct: 276 LKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISG 335
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +A+E ++ + E P +T +S+ A A L L+LG +LH ++T L
Sbjct: 336 YVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEK 395
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + ++DMY+KC +D A VF++I +K+ I W S+I N R EA+ FR+M M
Sbjct: 396 CHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGM 455
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ + V++ LSACA + AL GKEIH ++ + D + ++L+DMY +CG +
Sbjct: 456 EGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNF 515
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ F+ ER+ +WN +++ Y G F +M+
Sbjct: 516 SRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEML 555
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 258/559 (46%), Gaps = 22/559 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN NG A+K M+ I + ++ +C + D G LH +
Sbjct: 128 NVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVS 187
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + N L+M+ K L A +F DL SWN +I GY + G EA L
Sbjct: 188 CGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHL 247
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G+KPD TF L + LK KE+H ++IR DV + +ALI +Y
Sbjct: 248 FRGMI-SAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D+ A+ + D + MISGY NG+ + L F + + + P +T SS
Sbjct: 307 KCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ A + LG+E+HG +IK + V + ++ MY G + +VF+R+ KD
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ W +MI+ + P +A+ ++ M EG+ D ++I+ LSACA L L G ++H
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L ++ L S + ++LIDMY+KC ++ + VF ++ ++N +SW SII + E
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKE 546
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALL 541
L F +M+ N ++P+ VT + I+SAC G + G + H G+ +
Sbjct: 547 CLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVA 606
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID------- 592
DM+ R GR+ A+ NS D W LL G LAE + + D
Sbjct: 607 DMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSG 666
Query: 593 ----------SKGNWRKLM 601
G WRK++
Sbjct: 667 YYVLLANVQAGAGKWRKVL 685
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 182/356 (51%), Gaps = 2/356 (0%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MYV+ G L A+ +F + +WN MI G+ G++ L+ ++ M V PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
V+ A + K+G+ VH V MG +DV V + LIK+Y G+ + + +F +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD V W M++ Y + A++ + M P+ +T A VLS CA LDLG +
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH +A+ GL +ANTL+ MYSKC+C+ A ++F P +++SW II G N
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EA FR M+ +KP+S+T S L + +L KEIH + +R V D FL +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 540 LLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
L+D+Y +C ++ A S+ D +++GY G+ A E FR ++ +
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 275/518 (53%), Gaps = 7/518 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVVSKTMSHLSVRLGNA 135
+ +++ M +L I + +LV C + G + EG+ +H V+K+ V + A
Sbjct: 142 EGMEFFQKMCDLGIKPSSFVIASLVTACG-RSGSMFREGVQVHGFVAKSGLLSDVYVSTA 200
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L ++ +G + + VF +M DR++ SW L+ GY+ G +E + +Y+ M GV+
Sbjct: 201 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG-EGVEC 259
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ + V+ +CG + D G+++ VI+ G E+ + V N+LI+M+ G++ A +F
Sbjct: 260 NENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIF 319
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + +RD ISWN++++ Y +NG + +F +MR + + T+S+++S V +K
Sbjct: 320 NQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQK 379
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR +HG V+KMGF V VCN L++MY G EE + VF +M +KD++SW ++++ +
Sbjct: 380 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFV 439
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ M G + +T S L+AC D G LH L + +GL I
Sbjct: 440 NDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQI 499
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I N L+ MY K + + V Q+P ++V++W ++I G N +AL F+ + +
Sbjct: 500 IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEG 559
Query: 495 LKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ N +T+VS+LSAC G L+ GK +HA+ + G D + N+L+ MY +CG + +
Sbjct: 560 VSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 619
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ FN + R + WN +L A G G + KM
Sbjct: 620 QDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKM 657
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 259/522 (49%), Gaps = 4/522 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ + SM+ + +E+++ ++ C + G + V K+ + +
Sbjct: 240 GEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVE 299
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +SMF G++ +A Y+F ++ +RD SWN ++ YA+ G +E+ ++ M
Sbjct: 300 NSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHD- 358
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ + T +L G V K G+ +H V++ G+++ V V N L+ MY G A L
Sbjct: 359 EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADL 418
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP +D ISWN++++ + +G + L + M +++T +S ++A
Sbjct: 419 VFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR +HG V+ G D+ + N L+ MY G +V +M +DVV+W +I
Sbjct: 479 FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGLIS 432
Y + PDKA+ +Q + EG + IT+ SVLSAC G+ L+ G LH + G S
Sbjct: 539 YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFES 598
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ N+LI MY+KC + + ++F+ + ++++I+W +I+ + E L KM
Sbjct: 599 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMR 658
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L + + LSA A++ L G+++H A+++G D F+ NA DMY +CG +
Sbjct: 659 SFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIG 718
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
S R + +WNIL++ G E F +M++
Sbjct: 719 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLE 760
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 255/491 (51%), Gaps = 17/491 (3%)
Query: 92 CVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
C D+ + R G LH++ K + LSV N ++M+ KFG + A Y
Sbjct: 62 CFDQTGFSQITR-------ETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARY 114
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F KM R+ SWN ++ G + G + E + +Q+M +G +KP + ++ CG
Sbjct: 115 LFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLG-IKPSSFVIASLVTACGRSG 173
Query: 212 DLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
+ R G +VH V + G +DV V A++ +Y G + +R VF+ MP R+ +SW +++
Sbjct: 174 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 233
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
GY + GE + + ++ MR V+ + ++S VIS+ L+ DE LGR++ G VIK G
Sbjct: 234 VGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLE 293
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++V N LI M+ + GN + +F+++ +D +SW ++++ Y + +++ + +M
Sbjct: 294 SKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLM 353
Query: 391 EAEGSMPDEITIASVLSACACLGNLD---LGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
DE+ +V + + LG++D G +H L ++ G S + + NTL+ MY+
Sbjct: 354 R---RFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 410
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSIL 506
++A VF Q+P K++ISW S++ + RS +AL M+ K N VT S L
Sbjct: 411 GRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSAL 470
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVS 565
+AC G+ +H + G+ + + NAL+ MY + G M + RDV
Sbjct: 471 AACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVV 530
Query: 566 AWNILLTGYAE 576
AWN L+ GYAE
Sbjct: 531 AWNALIGGYAE 541
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 225/458 (49%), Gaps = 15/458 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYL 117
NS + NG +E++ + + M+ + V+ + L+ + +W RG +
Sbjct: 331 NSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRG------I 384
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H +V K V + N L M+ G A VF +M +DL SWN L+ + G
Sbjct: 385 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRS 444
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL + M G + TF L C +G+ +H V+ G + + NA
Sbjct: 445 LDALGILCSMIRTGK-SVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNA 503
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L++MY K G + +R V MP+RD ++WNA+I GY EN + K L F +R V +
Sbjct: 504 LVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSAN 563
Query: 298 FMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++T+ SV+SA + GD + G+ +H Y++ GF D V N LI MY G+ + +F
Sbjct: 564 YITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 623
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++++ +++W +++ ++ ++ M + G D+ + + LSA A L L+
Sbjct: 624 NGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLE 683
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +LH LA++ G I N DMYSKC I + +++ ++++ SW +I L
Sbjct: 684 EGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 743
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+ E F +M+ + +KP VT VS+L+AC+ G
Sbjct: 744 RHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGG 781
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 208/418 (49%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G AL L SM V+ + + C +D+G LH +V
Sbjct: 432 NSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVV 491
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +GNA +SM+ K G + + V +M RD+ +WN LIGGYA+ D+AL+
Sbjct: 492 SGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAA 551
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Q + V GV + T VL C DL +RGK +H +++ G+E+D V N+LITMY
Sbjct: 552 FQTL-RVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 610
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL ++ +F+G+ R I+WNA+++ +G + L L MR + D + S
Sbjct: 611 AKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFS 670
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+SA+ + + G+++HG +K+GF D + N MY G E K+ ++
Sbjct: 671 EGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNR 730
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+ SW +IS ++ ET+ M G P +T S+L+AC+ G +D G+ +
Sbjct: 731 SLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYY 790
Query: 423 QLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ + GL I +ID+ + + +A ++P K N + W S++ +++
Sbjct: 791 DMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 848
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
G+ +HA ++ V N L++MY + GR+KPA F+ R+ +WN +++G
Sbjct: 77 GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136
Query: 577 RGQGALAEEFFRKMID 592
G EFF+KM D
Sbjct: 137 VGLYLEGMEFFQKMCD 152
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 264/484 (54%), Gaps = 7/484 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D GL +H+ K +V +G++ ++M+ K +L A VF + +R++ WN ++GGY
Sbjct: 202 DFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGY 261
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ G+ E + L M G PD +T+ +L C + ++ G+++H +I+ + ++
Sbjct: 262 AQNGYAHEVIELLSNMKSCG-FHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASN 320
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ V NALI MY K G L AR F+ M RD +SWNA+I GY + + ++ ++F M
Sbjct: 321 LFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHL 380
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V + PD ++L+S++SA V + G+ +H +K G + + LI MY G+
Sbjct: 381 VGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGS 440
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+K+ M VVS +I+ Y V ++A+ ++ M+AEG P EIT AS+L C
Sbjct: 441 AQKILKSMPEHSVVSINALIAGY-APVNLEEAIILFEKMQAEGLNPSEITFASLLDGCGG 499
Query: 412 LGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWT 469
L LGI++H L ++ GL + +L+ MY K A +F + + K+ I WT
Sbjct: 500 PEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILWT 559
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I GL NN S EAL F+++M N P+ T VS+L ACA + ++ G+EIH+ R
Sbjct: 560 AMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRT 619
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEF 586
G+ D +AL+DMY +CG ++ + F ++ DV +WN ++ G+A+ G A
Sbjct: 620 GLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALRI 679
Query: 587 FRKM 590
F +M
Sbjct: 680 FNEM 683
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 250/458 (54%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +V G L A +F +M + ++ +WNV+I G+A+ G +++ L+ M G+K
Sbjct: 126 INAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNM-RKAGIKST 184
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL + DL G VH I+ G +++V V ++LI MY KC +L A+ VFD
Sbjct: 185 RSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFD 244
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ + WNAM+ GY +NG + + L M+ PD T +S++SA + +
Sbjct: 245 PIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEG 304
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR++H +IK F+ ++ V N LI MY G E+ K F M+S+D VSW +I Y
Sbjct: 305 GRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQ 364
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A +Q M G +PDE+++AS+LSACA + + G +H L++++GL + +
Sbjct: 365 EEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYA 424
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
++LIDMY+KC + A ++ +P+ +V+S ++I G N EA+I F KM L
Sbjct: 425 GSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNLE-EAIILFEKMQAEGL 483
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAW 554
P+ +T S+L C L+ G +IH L+ G+ + D FL +LL MYV+ R A
Sbjct: 484 NPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDAR 543
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ SN + W +++G A+ A +F+++M
Sbjct: 544 ILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEM 581
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 224/464 (48%), Gaps = 38/464 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K S A + M+ K + VF D SW LI GY K
Sbjct: 37 GRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVK 96
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG +EAL ++++M VG +PD F V
Sbjct: 97 AGLPEEALEVFEQMKKVGR-EPDQVAF-------------------------------VT 124
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V+NA YV G L A +F MP + ++WN MISG+ + G K + LF MR+
Sbjct: 125 VINA----YVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAG 180
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ TL SV+SA + D G VH IK G +V V + LI MY E +
Sbjct: 181 IKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAK 240
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF ++ ++VV W M+ Y + + +E M++ G PDE T S+LSACACL
Sbjct: 241 KVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLE 300
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+++ G +LH + ++ S + + N LIDMY+K ++ A + F + ++ +SW +II+
Sbjct: 301 HVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIV 360
Query: 474 GLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G EA + F+KM ++ + P+ V+L SILSACA + GK IH +++ G+
Sbjct: 361 GYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLET 420
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
+ ++L+DMY +CG + A S E V + N L+ GYA
Sbjct: 421 SLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYA 464
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 240/463 (51%), Gaps = 8/463 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + ++ L +M+ DE +++ C + G LHS++ K
Sbjct: 255 NAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIK 314
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GNA + M+ K G L A F M RD SWN +I GY + EA +
Sbjct: 315 NKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLM 374
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q+M VG + PD + +L C V ++GK +H ++ G E + ++LI MY
Sbjct: 375 FQKMHLVG-ILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYA 433
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFE-NGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGD+ A+ + MP+ +S NA+I+GY N E + ++LF M+ ++P +T +
Sbjct: 434 KCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNLE--EAIILFEKMQAEGLNPSEITFA 491
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ LG ++H ++K G DD + L+ MY+ + + +FS +
Sbjct: 492 SLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSN 551
Query: 362 -KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K + WT MIS + D+A++ YQ M + ++PD+ T SVL ACA L ++ G +
Sbjct: 552 PKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGRE 611
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN-VISWTSIILGLRLNN 479
+H L RTGL + LIDMY+KC + +++VF + KN VISW S+I+G N
Sbjct: 612 IHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNG 671
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ AL F +M ++ P+ VT + +L+AC+ G + G++I
Sbjct: 672 YAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI 714
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 205/406 (50%), Gaps = 37/406 (9%)
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ W G+ P+ +TF VL C + ++ G+ VH +V++ G+E V ALI MY K
Sbjct: 8 LLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNN 67
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ R VFDG D +SW ++I+GY + G + L +F M++V +PD + +VI+
Sbjct: 68 RMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVIN 127
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A Y++ G ++ +F +M + +VV+
Sbjct: 128 A-----------------------------------YVALGRLDDALGLFFQMPNPNVVA 152
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W MIS + K++E + M G T+ SVLSA A L +LD G+ +H A+
Sbjct: 153 WNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAI 212
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL S + + ++LI+MY+KCK ++ A +VF I ++NV+ W +++ G N + E +
Sbjct: 213 KQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIE 272
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
M P+ T SILSACA + + G+++H+ ++ A + F+ NAL+DMY
Sbjct: 273 LLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYA 332
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ G ++ A QF RD +WN ++ GY + A F+KM
Sbjct: 333 KSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKM 378
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 10/389 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A M + I DE +L +++ C G+++G +H + K+ S+ G++ +
Sbjct: 370 EAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLI 429
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K GD+G A + M + + S N LI GYA +EA+ L+++M G+ P
Sbjct: 430 DMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNL-EEAIILFEKM-QAEGLNPSE 487
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRARLVFD 256
TF +L CGG L G ++H +++ G + D D + +L+ MYVK AR++F
Sbjct: 488 ITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFS 547
Query: 257 GMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ I W AMISG +N + L + MR PD T SV+ A ++
Sbjct: 548 EFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIG 607
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISCY 374
GRE+H + + G D S C+ LI MY G+ +VF M SK DV+SW +MI +
Sbjct: 608 DGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGF 667
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ + A+ + M+ +PD++T VL+AC+ G + G ++ + S++
Sbjct: 668 AKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFDMKP-----SFV 722
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK 463
L+ K K +E+F I +K
Sbjct: 723 TAPACLVREEVLTKAYAKMVEIFRWIENK 751
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ Y ++ + G P+E T A VLS CA L +++ G +H ++ G LIDM
Sbjct: 3 LKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDM 62
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTL 502
Y+K + VF + +SWTS+I G EAL F +M + +P+ V
Sbjct: 63 YAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAF 122
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNE 561
V++++A YV GR+ A F
Sbjct: 123 VTVINA-----------------------------------YVALGRLDDALGLFFQMPN 147
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+V AWN++++G+A+RG + E F M
Sbjct: 148 PNVVAWNVMISGHAQRGHETKSIELFCNM 176
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 278/527 (52%), Gaps = 9/527 (1%)
Query: 52 TQNTSSIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK 108
T + + I K+P NS + + + L M+ L + + L +++ C +
Sbjct: 14 TLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 73
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ G +H + T VR+G A + + K G + A VF M DRD+ WN ++
Sbjct: 74 NAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMV 133
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG- 227
GY G ++EA+ L + M ++P+ T +L C G +L+ G+ VH + +R G
Sbjct: 134 YGYVGWGCYEEAMLLVREM-GRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM 192
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++++ V ALI Y++ D+ L+FD M R+ +SWNAMISGY++ G+Y K L LF+
Sbjct: 193 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 251
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V D +T+ + A +G KLG+++H IK F +D+ + N L+ MY + G
Sbjct: 252 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 311
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E ++F + ++D W +MIS Y ++A++ + M++EG DE T+ +LS
Sbjct: 312 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 371
Query: 408 ACACLGN-LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
C L + L G LH +++G+ + N L+ MY++ C++ ++F ++ ++I
Sbjct: 372 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 431
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++IL L N +A F +M + +KPNS T++SIL+AC + L G+ IH +
Sbjct: 432 SWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYV 491
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
++ + + L AL DMY+ CG A + F +RD+ +WN ++
Sbjct: 492 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI 538
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 261/524 (49%), Gaps = 27/524 (5%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT-MSHLSVRL 132
G E+A+ + M N+ + +V L+ CE G +H + M + +
Sbjct: 140 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV 199
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + +++F D+ +F M R++ SWN +I GY G + +AL L+ +M V
Sbjct: 200 ATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VDE 257
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VK D T ++ C + LK GK++H I+F + D+ ++NAL+ MY G L +
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +P RD WN+MIS Y G + + + LFI M+ V D T+ ++S E +
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377
Query: 313 DEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
L G+ +H +VIK G D S+ N L+ MY E +K+F RM+ D++SW TMI
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 437
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ L +A E ++ M P+ TI S+L+AC + LD G +H M+ +
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 497
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ L DMY C A ++F PD+++ISW + M
Sbjct: 498 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNA--------------------M 537
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG--VAFDGFLPNALLDMYVRCGR 549
+ +PNSVT++++LS+ + L G+ +HA+ R G + D L NA + MY RCG
Sbjct: 538 IXKAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGS 597
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ A N F + +R++ +WN ++ GY G+G+ A F +M++
Sbjct: 598 LQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE 641
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 222/464 (47%), Gaps = 29/464 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+M+ G L + +F + +RD WN +I YA G +EA+ L+ RM GV
Sbjct: 301 NALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM-QSEGV 359
Query: 194 KPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K D T +L C + L +GK +H HVI+ G D + NAL++MY + + +
Sbjct: 360 KKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ 419
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M D ISWN MI N + LF MRE + P+ T+ S+++A E V
Sbjct: 420 KIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVT 479
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +HGYV+K + + L MY++ G+ +F +D++SW MI
Sbjct: 480 CLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX 539
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG--L 430
E P+ +TI +VLS+ L L G LH R G L
Sbjct: 540 KAE---------------------PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSL 578
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +AN I MY++C + A +F +P +N+ISW ++I G +N R +A++ F +
Sbjct: 579 GLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQ 638
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + +PN VT VS+LSAC+ G + G ++ H+ V + + ++D+ R G
Sbjct: 639 MLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGG 698
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A +S E D S W LL+ A+ F K+
Sbjct: 699 CIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 742
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 229/456 (50%), Gaps = 8/456 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+D WN +I A LS Y +M +G V P+ T P VL+ C ++RGK
Sbjct: 23 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLG-VLPNNTTLPLVLKACAAQNAVERGKS 81
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + DV V A++ Y KCG + AR VFD M RD + WNAM+ GY G
Sbjct: 82 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGC 141
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCN 337
Y + ++L M + P+ T+ +++ A E + +LGR VHGY ++ G F + V
Sbjct: 142 YEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVAT 201
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI YL F R +F M +++VSW MIS Y KA+E + M +
Sbjct: 202 ALIGFYLRFDMRVL-PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKF 260
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D +T+ + ACA LG+L LG ++HQLA++ + + I N L++MYS ++ + ++F
Sbjct: 261 DCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 320
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGA-L 515
+P+++ W S+I EA+ +F R +K + T+V +LS C + + L
Sbjct: 321 ESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGL 380
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGY 574
+ GK +HAH ++ G+ D L NALL MY ++ F+ + D+ +WN ++
Sbjct: 381 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILAL 440
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A A A E F +M +S K N ++ + C+
Sbjct: 441 ARNTLRAQACELFERMRESEIKPNSYTIISILAACE 476
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 27/433 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVS 122
NS ++ G E+A+ MQ + DE +V ++ +CE G +G LH+ V
Sbjct: 332 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 391
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ + LGNA LSM+ + + +F +M D+ SWN +I A+ +A
Sbjct: 392 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 451
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L++RM +KP+ YT +L C V L G+ +H +V++ E + + AL MY
Sbjct: 452 LFERMR-ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMY 510
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ CGD AR +F+G P RD ISWNAMI +P+ +T+
Sbjct: 511 MNCGDEATARDLFEGCPDRDLISWNAMIXK---------------------AEPNSVTII 549
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+V+S+ + G+ +H YV + GFS D+S+ N I MY G+ + E +F +
Sbjct: 550 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 609
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++++SW MI+ Y + A+ + M +G P+ +T SVLSAC+ G +++G++
Sbjct: 610 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 669
Query: 421 L-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L H + + ++ + ++D+ ++ CID+A E +P + + W +++ R
Sbjct: 670 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 729
Query: 479 NRSFEALIFFRKM 491
+ + +A F K+
Sbjct: 730 SDAKQAKTIFEKL 742
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 264/520 (50%), Gaps = 3/520 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ M + L +++ C + G +H V K +
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA +S++++ A VF M D ++N LI G+A+ G D AL ++ M + G
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEM-QLSG 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T +L C V DL++GK++H ++++ G D + +L+ +YVK GD+ A
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD + + + WN M+ Y + + K +F M V P+ T ++ G
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG ++H IK GF D+ V LI MY +G ++ +++ +E KDVVSWT+MI+
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ET++ M+A G PD I +AS +SACA + + G ++H +G +
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
+ I N L+ +Y++C +A F I K I+W +I G + EAL F KM
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
K N T VS +SA A + + GK+IHA ++ G + + NAL+ +Y +CG ++
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIE 599
Query: 552 PA-WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A + F +R+ +WN ++T ++ G+G A + F +M
Sbjct: 600 DAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQM 639
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 252/461 (54%), Gaps = 3/461 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN + ++ K G + A VF ++ RD SW ++ GYA+ G +EA+ LY+ M
Sbjct: 79 IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMH-RS 137
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV P Y +L C + G+ +HV V + G+ ++ V NALI++Y++C A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF M D +++N +ISG+ + G + L +F M+ + PD +T++S+++A V
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G+++H Y++K G S D + L+ +Y+ G+ EE ++F + +VV W M+
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y K+ + + M A G P++ T +L C G + LG ++H L ++ G
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + ++ LIDMYSK +DKA + I +K+V+SWTS+I G + EAL F++M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ P+++ L S +SACA I A+ G +IHA G + D + N L+ +Y RCG
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGIS 497
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
K A++ F + E ++ WN L++G+A+ G A + F KM
Sbjct: 498 KEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKM 538
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 234/441 (53%), Gaps = 2/441 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++AL D MQ + D + +L+ C +G LHS + K L +
Sbjct: 223 GHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIME 282
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++VK GD+ A +F ++ WN+++ Y + ++ ++ RM GV
Sbjct: 283 GSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRML-AAGV 341
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +T+PC+LRTC ++ G+++H I+ G+++D+ V LI MY K G L +A+
Sbjct: 342 RPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR 401
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ D + ++D +SW +MI+GY ++ + L F M+ + PD + L+S ISA +
Sbjct: 402 ILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKA 461
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G ++H V G+S DVS+ N L+ +Y G +E F +E K+ ++W +IS
Sbjct: 462 VHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISG 521
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ S L ++A++ + M+ G+ + T S +SA A L ++ G ++H ++TG S
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
I+N LI +Y KC I+ A F ++ +N +SW +II + R EAL F +M
Sbjct: 582 TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641
Query: 493 LNLKPNSVTLVSILSACARIG 513
LKP+ VT V +L+AC+ +G
Sbjct: 642 QGLKPSDVTFVGVLTACSHVG 662
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 229/460 (49%), Gaps = 23/460 (5%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQ---RMFWVGGVKPDVYTFPCVLRTCGG--- 209
M R S+N + G+ ++ L L+ R + V G F C LR C G
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGA----VDFACALRACRGSGR 56
Query: 210 ----VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
VP E+H I G + N LI +Y K G + RAR VF+ + RD +S
Sbjct: 57 RWPLVP------EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVS 110
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
W A++SGY +NG + + L+ M V P LSS++SA +LGR +H V
Sbjct: 111 WVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVY 170
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K GF + V N LI +YL + ++VF M D V++ T+IS + D+A+
Sbjct: 171 KQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALG 230
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M+ G PD +TIAS+L+AC+ +G+L G +LH ++ G+ I+ +L+D+Y
Sbjct: 231 IFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYV 290
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVS 504
K I++AL++F NV+ W +++ ++++ + IF+R + ++PN T
Sbjct: 291 KSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPC 350
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+L C G + G++IH+ ++ G D ++ L+DMY + G + A + E+D
Sbjct: 351 MLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKD 410
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGL 603
V +W ++ GY + A E F++M + G W +GL
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKEM-QACGIWPDNIGL 449
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 244/438 (55%), Gaps = 4/438 (0%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++++ WN +I ++K G+F +AL Y ++ V PD YTFP V++ C G+ D + G
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
V+ ++ G+E+D+ V NAL+ MY + G L RAR VFD MP RD +SWN++ISGY +G
Sbjct: 128 VYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y + L ++ +R + PD T+SSV+ A + K G+ +HG+ +K G + V N
Sbjct: 188 YEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNG 247
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MYL F + +VF M +D V++ TMI Y + +++V+ + + + PD
Sbjct: 248 LLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF-LENLDQFKPD 306
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T+ SVL AC L +L L ++ +R G + + N LID+Y+KC + A +VF+
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFN 366
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+ K+ +SW SII G + EA+ F+ MM + + + +T + ++S R+ L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKF 426
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GK +H++ ++ G+ D + NAL+DMY +CG + + FNS D WN +++
Sbjct: 427 GKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVR 486
Query: 577 RGQGALAEEFFRKMIDSK 594
G A + +M +K
Sbjct: 487 FGDFATGLQVTTQMRKNK 504
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 271/531 (51%), Gaps = 8/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +AL++ ++E + D+ ++++ C + G ++ + +
Sbjct: 75 NSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILE 134
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ + G L A VF +M RDL SWN LI GY+ G+++EAL +
Sbjct: 135 MGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 184 YQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y R W + PD +T VL + +K+G+ +H ++ G + V N L+ M
Sbjct: 195 YHELRNSW---IVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAM 251
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y+K AR VFD M RD +++N MI GY + + + +F+ + PD +T+
Sbjct: 252 YLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQF-KPDILTV 310
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV+ A + D L + ++ Y+++ GF + +V N LI +Y G+ VF+ ME
Sbjct: 311 TSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMEC 370
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD VSW ++IS Y S +A++ ++MM D IT ++S L +L G L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGL 430
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNR 480
H +++G+ + ++N LIDMY+KC + +L++F+ + + ++W ++I +R +
Sbjct: 431 HSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDF 490
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ + + + P+ T + L CA + A GKEIH LR G + + NAL
Sbjct: 491 ATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++MY +CG ++ ++ F + RDV W ++ Y G+G A E F M
Sbjct: 551 IEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDM 601
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 268/537 (49%), Gaps = 14/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +G E+AL+ ++ I D + +++ +G LH K
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLK 235
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N L+M++KF A VF +M RD ++N +I GY K +E++ +
Sbjct: 236 SGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKM 295
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + KPD+ T VL CG + DL K ++ +++R G+ + V N LI +Y
Sbjct: 296 FLEN--LDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYA 353
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGD++ AR VF+ M +D +SWN++ISGY ++G+ M+ + LF MM + D +T
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+IS S + D K G+ +H IK G D+SV N LI MY G + K+F+ M + D
Sbjct: 414 LISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLD 473
Query: 364 VVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
V+W T+IS C T QM + + +PD T L CA L LG ++H
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKNK-VVPDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+R G S + I N LI+MYSKC C++ + VF ++ ++V++WT +I +
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGE 592
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAHALRIGVAFDGFLP 537
+AL F M + + P+SV ++++ AC+ G L C +++ H +I + +
Sbjct: 593 KALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTH-YKIDPMIEHY-- 649
Query: 538 NALLDMYVRCGRMKPA--WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D+ R ++ A + Q E D S W +L G AE R++I+
Sbjct: 650 ACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 195/391 (49%), Gaps = 2/391 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKR 261
+ R +L + +H VI G + LI Y + VF + P +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAK 69
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN++I + +NG + K L + +RE V PD T SVI A + D ++G V+
Sbjct: 70 NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+++MGF D+ V N L+ MY G +VF M +D+VSW ++IS Y +
Sbjct: 130 KQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+E Y + +PD T++SVL A A L + G LH +++G+ S ++ N L+
Sbjct: 190 EALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLL 249
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVT 501
MY K A VF ++ ++ +++ ++I G E++ F + + KP+ +T
Sbjct: 250 AMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILT 309
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
+ S+L AC + L K I+ + LR G + + N L+D+Y +CG M A + FNS E
Sbjct: 310 VTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSME 369
Query: 562 -RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+D +WN +++GY + G A + F+ M+
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
M ++ A + A + NL+ ++H L + GL + LID YS + +L
Sbjct: 1 MQTRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLS 60
Query: 456 VFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
VF ++ P KNV W SII N +AL F+ K+ + + P+ T S++ ACA +
Sbjct: 61 VFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLT 572
G ++ L +G D ++ NAL+DMY R G + A F+ RD+ +WN L++
Sbjct: 121 DAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLIS 180
Query: 573 GYAERGQGALAEEFFRKMIDS 593
GY+ G A E + ++ +S
Sbjct: 181 GYSSHGYYEEALEIYHELRNS 201
>gi|326512500|dbj|BAJ99605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 621
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 260/476 (54%), Gaps = 7/476 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H V ++ + L N ++ + +F ++ A VF +M +R + SW ++ GY K+G
Sbjct: 108 VHGVAVRSPDGPGIFLANNLITSYARFHEIPDARKVFDEMPERTVVSWTAMMNGYQKSGN 167
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
E + L+ M G + + +F C+L++CG D K G++VH V++ G+ ++V + +
Sbjct: 168 HGEVVRLFLDMI-ASGERGNSLSFVCLLKSCGEQCDGKLGQQVHCCVVKGGW-SNVIMDS 225
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
A+ Y +CGD+ A ++FD M RD ISW MI+ Y ++G K L +F M P
Sbjct: 226 AVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMITAYVQHGRGDKALQMFPAMISEGFHP 285
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ T+ S++ A + G+++HG ++K F +D+ V + L+ MY + + VF
Sbjct: 286 NEFTVCSILKACAEEKALRCGKQLHGALVKKLFKNDIHVGSALVTMYARNREVSDAQAVF 345
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M ++ ++WT++IS Y S ++A+ ++ M+ + +TI +LSAC L +L
Sbjct: 346 DVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMKTRRVSVNNLTIVGLLSACGSLRSLC 405
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG +LH ++ + + I +TL+ Y KC A + ++PD++ ++WT++I G
Sbjct: 406 LGKELHAQVIKNSIQENLQIGSTLVWCYCKCGEYTYAARILEEMPDRDAVAWTAMISGYN 465
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
S EAL M+ + + PN+ T S L ACA++ AL G+ IH + + F
Sbjct: 466 SVGHSAEALKSLDDMLWDGVTPNTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFSNVF 525
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++L+DMY+RCG++ A F++ E ++ W +++TG+A+ G L EE F+ M
Sbjct: 526 VGSSLIDMYMRCGKVDEARRVFSALPEHNLVTWKVIITGFAQNG---LCEEAFKYM 578
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 204/385 (52%), Gaps = 2/385 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + +A + + GD+ A +F KM RD+ SW +I Y + G D+AL ++ M
Sbjct: 220 NVIMDSAVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMITAYVQHGRGDKALQMFPAMI 279
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G P+ +T +L+ C L+ GK++H +++ ++ D+ V +AL+TMY + ++
Sbjct: 280 -SEGFHPNEFTVCSILKACAEEKALRCGKQLHGALVKKLFKNDIHVGSALVTMYARNREV 338
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+ VFD MP+R+ I+W ++ISGY ++G + +MLF M+ V + +T+ ++SA
Sbjct: 339 SDAQAVFDVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMKTRRVSVNNLTIVGLLSAC 398
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ LG+E+H VIK +++ + + L+ Y G ++ M +D V+WT
Sbjct: 399 GSLRSLCLGKELHAQVIKNSIQENLQIGSTLVWCYCKCGEYTYAARILEEMPDRDAVAWT 458
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MIS Y +A+++ M +G P+ T +S L ACA L L G ++H + +T
Sbjct: 459 AMISGYNSVGHSAEALKSLDDMLWDGVTPNTYTYSSALKACAKLEALQDGRRIHGVVNKT 518
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
S + + ++LIDMY +C +D+A VF +P+ N+++W II G N EA +
Sbjct: 519 PAFSNVFVGSSLIDMYMRCGKVDEARRVFSALPEHNLVTWKVIITGFAQNGLCEEAFKYM 578
Query: 489 RKMMLN-LKPNSVTLVSILSACARI 512
M + L +L++C +
Sbjct: 579 YLMQQQGYDADDFMLSKVLTSCGDL 603
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 216/401 (53%), Gaps = 6/401 (1%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T LR+CG V D+ RG VH +R + + N LIT Y + ++ AR
Sbjct: 85 ISPDAETLASWLRSCGAVADV-RG--VHGVAVRSPDGPGIFLANNLITSYARFHEIPDAR 141
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP+R +SW AM++GY ++G + + + LF+ M + ++ ++ +
Sbjct: 142 KVFDEMPERTVVSWTAMMNGYQKSGNHGEVVRLFLDMIASGERGNSLSFVCLLKSCGEQC 201
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D KLG++VH V+K G+S +V + + + Y G+ + +F +M S+DV+SWTTMI+
Sbjct: 202 DGKLGQQVHCCVVKGGWS-NVIMDSAVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMIT 260
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y DKA++ + M +EG P+E T+ S+L ACA L G +LH ++ +
Sbjct: 261 AYVQHGRGDKALQMFPAMISEGFHPNEFTVCSILKACAEEKALRCGKQLHGALVKKLFKN 320
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + + L+ MY++ + + A VF +P +N I+WTS+I G + + A++ FR+M
Sbjct: 321 DIHVGSALVTMYARNREVSDAQAVFDVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMK 380
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ N++T+V +LSAC + +L GKE+HA ++ + + + + L+ Y +CG
Sbjct: 381 TRRVSVNNLTIVGLLSACGSLRSLCLGKELHAQVIKNSIQENLQIGSTLVWCYCKCGEYT 440
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A +RD AW +++GY G A A + M+
Sbjct: 441 YAARILEEMPDRDAVAWTAMISGYNSVGHSAEALKSLDDML 481
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 1/340 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++AL+ +M +E + ++++ C ++ G LH + K + + +
Sbjct: 265 HGRGDKALQMFPAMISEGFHPNEFTVCSILKACAEEKALRCGKQLHGALVKKLFKNDIHV 324
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + ++ A VF M R+ +W LI GYA++G + A+ L+++M
Sbjct: 325 GSALVTMYARNREVSDAQAVFDVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMK-TRR 383
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + L GKE+H VI+ + ++ + + L+ Y KCG+ A
Sbjct: 384 VSVNNLTIVGLLSACGSLRSLCLGKELHAQVIKNSIQENLQIGSTLVWCYCKCGEYTYAA 443
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ++W AMISGY G + L M V P+ T SS + A +
Sbjct: 444 RILEEMPDRDAVAWTAMISGYNSVGHSAEALKSLDDMLWDGVTPNTYTYSSALKACAKLE 503
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR +HG V K +V V + LI MY+ G +E +VFS + ++V+W +I+
Sbjct: 504 ALQDGRRIHGVVNKTPAFSNVFVGSSLIDMYMRCGKVDEARRVFSALPEHNLVTWKVIIT 563
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ + L ++A + +M+ +G D+ ++ VL++C L
Sbjct: 564 GFAQNGLCEEAFKYMYLMQQQGYDADDFMLSKVLTSCGDL 603
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 8/318 (2%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD TL+S + + V D R VHG ++ + + N LI Y F +
Sbjct: 85 ISPDAETLASWLRSCGAVADV---RGVHGVAVRSPDGPGIFLANNLITSYARFHEIPDAR 141
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF M + VVSWT M++ Y+ S + V + M A G + ++ +L +C
Sbjct: 142 KVFDEMPERTVVSWTAMMNGYQKSGNHGEVVRLFLDMIASGERGNSLSFVCLLKSCGEQC 201
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ LG ++H ++ G S +I+ + + Y++C +D A +F ++ ++VISWT++I
Sbjct: 202 DGKLGQQVHCCVVKGGW-SNVIMDSAVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMIT 260
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ R +AL F M+ PN T+ SIL ACA AL CGK++H ++
Sbjct: 261 AYVQHGRGDKALQMFPAMISEGFHPNEFTVCSILKACAEEKALRCGKQLHGALVKKLFKN 320
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D + +AL+ MY R + A F+ R+ W L++GYA+ G A FR+M
Sbjct: 321 DIHVGSALVTMYARNREVSDAQAVFDVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMK 380
Query: 592 DSKGNWRKL--MGLFRKC 607
+ + L +GL C
Sbjct: 381 TRRVSVNNLTIVGLLSAC 398
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/539 (29%), Positives = 269/539 (49%), Gaps = 5/539 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ M + +++ C +D G LH++V K L +
Sbjct: 268 NGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYV 327
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++++ + G+ A VF K+ +D S+N LI G ++ G D AL L+++M +
Sbjct: 328 CNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKM-QLDH 386
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD T +L C + L +G+++H + I+ G D+ + +L+ +YVKC D+ A
Sbjct: 387 LKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAH 446
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F + + WN M+ Y + K +F M+ + P+ T S++ G
Sbjct: 447 KFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFG 506
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG ++H IK GF +V VC+ LI MY G + + R+ +DVVSWT +I+
Sbjct: 507 ALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIA 566
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L +A+ + M G D I +S +SACA + L G ++H + +G
Sbjct: 567 GYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSE 626
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ I N L+ +Y++C I +A F +I K+ ISW +++ G + EAL F +M
Sbjct: 627 DLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMT 686
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
N+K + T S +SA A + + GK+IHA ++ G + + NAL+ +Y +CG +
Sbjct: 687 RANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCID 746
Query: 552 PAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A + F E++ +WN ++TGY++ G G A F+KM + +K N +G+ C
Sbjct: 747 GAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISAC 805
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 239/451 (52%), Gaps = 2/451 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G ++AL+ MQ ++ D + +L+ C + +G LHS K
Sbjct: 360 NSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIK 419
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + + L ++VK D+ A F ++ WNV++ Y + ++ +
Sbjct: 420 AGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCI 479
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G+ P+ +T+P +LRTC L G+++H I+ G+E +V V + LI MY
Sbjct: 480 FRQM-QIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYA 538
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L AR + + + D +SW A+I+GY ++ + + L LF M + D + SS
Sbjct: 539 KLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSS 598
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + G+++H G+S+D+S+ N L+ +Y G +E F ++++KD
Sbjct: 599 AISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKD 658
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+SW ++S + S ++A++ + M T S +SA A + N+ G ++H
Sbjct: 659 SISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHA 718
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ M+TG S I ++N LI +Y+KC CID A F +IP+KN ISW ++I G + E
Sbjct: 719 MIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIE 778
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
A+ F+KM + KPN VT V ++SAC+ +G
Sbjct: 779 AVNLFQKMKQVGAKPNHVTFVGVISACSHVG 809
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 245/480 (51%), Gaps = 6/480 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LHS + K L + + + GDL VF M R L +WN ++ G
Sbjct: 109 LHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKT 168
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG-GVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ L L+ +M V P+ T VLR G G +++H +I G
Sbjct: 169 SNRVLGLFAQMVE-ENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIAC 227
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N LI +Y K G + AR VFD + +D +SW A+IS Y +NG + + LF M +
Sbjct: 228 NPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLS 287
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P SSV+SA + +G ++H V K GF + VCN L+ +Y GN ++V
Sbjct: 288 PTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQV 347
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
FS+++ KD VS+ ++IS D+A+E ++ M+ + PD +T+AS+LSACA + +L
Sbjct: 348 FSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSL 407
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +LH A++ G+ III +L+D+Y KC I A + F +NV+ W +++
Sbjct: 408 SKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAY 467
Query: 476 -RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+L+N S ++ FR+M + L PN T SIL C GAL G++IH+ A++ G F+
Sbjct: 468 GQLDNLS-KSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFN 526
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ + L+DMY + G++ A NE DV +W L+ GY + A F +M++
Sbjct: 527 VYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLN 586
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 208/405 (51%), Gaps = 9/405 (2%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + T+ +L C K++H +++ G++ + + + LI Y GDL
Sbjct: 82 GSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSV 141
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD MP R ++WN ++SG N + L LF M E V+P+ +T++SV+ A
Sbjct: 142 VKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRA---Y 198
Query: 312 GDEKLG----REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G + ++H +I G CNPLI +Y G KVF + KD VSW
Sbjct: 199 GSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSW 258
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+IS Y + ++A+ + M G P +SVLSACA + D+G +LH L +
Sbjct: 259 VAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFK 318
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + N L+ +YS+ A +VF +I K+ +S+ S+I GL S AL
Sbjct: 319 CGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALEL 378
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM L+ LKP+ VT+ S+LSACA I +L G+++H++A++ G+ D + +LLD+YV+
Sbjct: 379 FKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVK 438
Query: 547 CGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
C + A F + + +V WN++L Y + + + FR+M
Sbjct: 439 CSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQM 483
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 174/333 (52%), Gaps = 2/333 (0%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+++R C D G +HS KT +V + + + M+ K G L A + ++ +
Sbjct: 497 SILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEE 556
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ SW LI GY + F EAL+L+ M G++ D F + C G+ L +G+++
Sbjct: 557 DVVSWTALIAGYTQHDLFTEALNLFDEML-NRGIQSDNIGFSSAISACAGIQALSQGQQI 615
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H GY D+ + NAL+++Y +CG + A L F+ + +D ISWNA++SG+ ++G
Sbjct: 616 HAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYC 675
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ L +F M + T S +SA+ + + K G+++H ++K GF ++ V N L
Sbjct: 676 EEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNAL 735
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I +Y G + ++ F + K+ +SW MI+ Y +AV +Q M+ G+ P+
Sbjct: 736 ITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNH 795
Query: 400 ITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
+T V+SAC+ +G ++ G+ ++ GLI
Sbjct: 796 VTFVGVISACSHVGLVNEGLAYFESMSKEHGLI 828
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 289/580 (49%), Gaps = 47/580 (8%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQE----------LNICVD- 94
S+ + Q+ IAT S +N G L AL+ D M E N +D
Sbjct: 80 SIVTMGLQSDPYIAT----SLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDG 135
Query: 95 -------EDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
E+ L R+ E W Y G +H + + M L A + M+
Sbjct: 136 YFKYGHFEEGLAQFCRMQELSW---YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSR 192
Query: 146 LGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
AW +FGK+ +R ++ +WNV+IGG+ + G ++++L LY + K +F
Sbjct: 193 PMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS-LAKNENCKLVSASFTGAF 251
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
C L G++VH VI+ ++ D V +L+TMY K G + A+ VFD + ++
Sbjct: 252 TACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVE 311
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
NAMIS + NG L L+ M+ D T+SS++S +VG GR VH V
Sbjct: 312 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 371
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
IK +V++ + L+ MY G+ E+ + VF M+ +DVV+W +MI+ + + A+
Sbjct: 372 IKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDAL 431
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ ++ ME EG D + SV+SA L N++LG +H A++ GL S + +A +L+DMY
Sbjct: 432 DLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMY 491
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP------- 497
SK + A VF +P+KN+++W S+I N +M +NL P
Sbjct: 492 SKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNG--------LPEMSINLLPQILQHGF 543
Query: 498 --NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+SV++ ++L A + + AL+ GK +HA+ +R+ + D + NAL+DMYV+CG +K A
Sbjct: 544 YLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQL 603
Query: 556 QF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F N R++ WN ++ GY G A F++M S+
Sbjct: 604 IFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSE 643
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 272/547 (49%), Gaps = 15/547 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E++L+ + N + + C D G +H V K +
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L+M+ K G + A VF ++ D+++ N +I + G +AL LY +M G
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGE 340
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
D +T +L C V G+ VH VI+ +++V + +AL+TMY KCG A
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF M +RD ++W +MI+G+ +N + L LF M + V D ++SVISA +
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +LG +HG+ IK G DV V L+ MY FG E E VFS M +K++V+W +MIS
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
CY + LP+ ++ + G D ++I +VL A + + L G LH +R + S
Sbjct: 521 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPS 580
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + N LIDMY KC C+ A +F +P +N+++W S+I G + EA+ F++M
Sbjct: 581 DLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMK 640
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGR 549
+ P+ VT ++++++C+ G + G + +RI + + + +++D+ R GR
Sbjct: 641 RSETAPDEVTFLALITSCSHSGMVEEGLNLF-QLMRIEYGVEPRMEHYASVVDLLGRAGR 699
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQ-----GALAEEFFRKMIDSKG-NWRKLM 601
+ A++ + D S W LL +A R G L + KM ++G N+ L+
Sbjct: 700 LDDAYSFIRGMPIDADRSVWLCLL--FACRAHRNMELGELVADNLLKMEPARGSNYVPLL 757
Query: 602 GLFRKCQ 608
L+ + +
Sbjct: 758 NLYGEVE 764
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 219/436 (50%), Gaps = 28/436 (6%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
S N I + G + +AL L+ + + +TFP +L+TC + +L G+ +H
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPH-SALTTAKFTFPSLLKTCASLSNLYHGRTIHAS 80
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-----DRISWNAMISGYFENG 277
++ G ++D + +LI MYVKCG L A VFD M + D WN +I GYF+ G
Sbjct: 81 IVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYG 140
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ +GL F M+E LS ++ GR++HGY+I+ F D +
Sbjct: 141 HFEEGLAQFCRMQE---------LSWYMA----------GRQIHGYIIRNMFEGDPYLET 181
Query: 338 PLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI MY S E +F ++E++ ++V+W MI + + + +K++E Y + + E
Sbjct: 182 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCK 241
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+ +AC+ LD G ++H ++ + +L+ MY+K ++ A +V
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKV 301
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGAL 515
F Q+ DK V ++I N R+++AL + KM P +S T+ S+LS C+ +G+
Sbjct: 302 FDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSY 361
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+ +HA ++ + + + +ALL MY +CG + A + F + ERDV AW ++ G+
Sbjct: 362 DFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGF 421
Query: 575 AERGQGALAEEFFRKM 590
+ + A + FR M
Sbjct: 422 CQNRRFKDALDLFRAM 437
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 215/436 (49%), Gaps = 4/436 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG AL + M+ VD + +L+ C YD G +H+ V K
Sbjct: 314 NAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIK 373
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + +A L+M+ K G A VF M +RD+ +W +I G+ + F +AL L
Sbjct: 374 RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 433
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M GVK D V+ G+ +++ G +H I+ G E+DV V +L+ MY
Sbjct: 434 FRAM-EKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYS 492
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G A +VF MP ++ ++WN+MIS Y NG + L + + D +++++
Sbjct: 493 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 552
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A V G+ +H Y I++ D+ V N LI MY+ G + + +F M ++
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 612
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+W +MI+ Y ++AV ++ M+ + PDE+T +++++C+ G ++ G+ L Q
Sbjct: 613 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 672
Query: 424 LA-MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
L + G+ + +++D+ + +D A +P D + W ++ R +R+
Sbjct: 673 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRA-HRN 731
Query: 482 FEALIFFRKMMLNLKP 497
E +L ++P
Sbjct: 732 MELGELVADNLLKMEP 747
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 250/458 (54%), Gaps = 24/458 (5%)
Query: 152 VFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F K DR D++SWN LI A+ G E+L + M + +KP+ TFPC +++C +
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLD-IKPNRSTFPCAIKSCSAL 95
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
DL GK+ H + FG+E+D+ V +ALI MY KCG L AR++FD +P+R+ ++W ++I
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155
Query: 271 SGYFENGEYMKGLMLFIMM---------REVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+GY +N + + LM+F EV D + + SV+SA V ++ + VH
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G IK+G + V N L+ Y G KVF M KDVVSW +MI+ Y + L
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLST 275
Query: 382 KAVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A E + M++A G +E+T++++L ACA G L +G+ LH ++ G ++ +I+A ++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNS 499
IDMY KC + A F + +KNV SWT++I G ++ + EAL +F++ + +KPN
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395
Query: 500 VTLVSILSACARIGALMCG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+T +S+L+AC+ G L G H + + GV G ++D+ R G +K A+
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG----CMVDLLGRAGYIKEAY 451
Query: 555 NQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
N S + RD W LL LAE R++
Sbjct: 452 NLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISAREL 489
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 181/366 (49%), Gaps = 20/366 (5%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ D SWN++I+ G+ + L F MR++ + P+ T I + + D G++
Sbjct: 44 RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQ 103
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
H + GF D+ V + LI MY G +F + +++V+WT++I+ Y V
Sbjct: 104 AHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGY---VQ 160
Query: 380 PDKAVETYQMM------------EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
D A E + E G+ D + + SVLSAC+ + N + +H +A++
Sbjct: 161 NDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIK 220
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL + + NTL+D Y+KC + + +VF + +K+V+SW S+I N S +A
Sbjct: 221 VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEV 280
Query: 488 FRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F M+ K N VTL ++L ACA GAL G +H +++G + + +++DMY
Sbjct: 281 FHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYC 340
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMG 602
+CG+ + A N F+ E++V +W ++ GY G A + F +MI K N+ +
Sbjct: 341 KCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFIS 400
Query: 603 LFRKCQ 608
+ C
Sbjct: 401 VLAACS 406
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 232/516 (44%), Gaps = 33/516 (6%)
Query: 24 RIPET------SFYFKPKTRHFSSKNAQSVQVLNT---QNTSSIATKNPNSRLNELCLNG 74
+IP T + FK HFS+ A + L T + + NS + EL G
Sbjct: 2 KIPYTISLQLLTISFKIHKNHFSTTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGG 61
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
++L+ M++L+I + ++ C + G H + + +
Sbjct: 62 DSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSS 121
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG--- 191
A + M+ K G L +A +F ++ R++ +W LI GY + EAL +++ +
Sbjct: 122 ALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEG 181
Query: 192 -----GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
G D VL C V + + VH I+ G + + V N L+ Y KCG
Sbjct: 182 NGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCG 241
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVI 305
++ +R VFD M ++D +SWN+MI+ Y +NG +F M++ + +TLS+++
Sbjct: 242 EVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLL 301
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A G ++G +H VIKMG+ ++V + +I MY G E F M+ K+V
Sbjct: 302 LACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR 361
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL---- 421
SWT MI+ Y +A++ + M G P+ IT SVL+AC+ G L+ G +
Sbjct: 362 SWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM 421
Query: 422 -HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
H+ + G+ Y ++D+ + I +A + + ++ + W S++ R++
Sbjct: 422 SHEYNVEPGVEHY----GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHK 477
Query: 480 RSFEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
A I R+ + L P++ V L +I + R
Sbjct: 478 DVELAEISARE-LFKLDPSNCGYYVLLANIYADAGR 512
>gi|125524838|gb|EAY72952.1| hypothetical protein OsI_00823 [Oryza sativa Indica Group]
Length = 658
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 288/582 (49%), Gaps = 32/582 (5%)
Query: 34 PKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSR---------LNELCLNGSLEQALKYLD 84
P+TR A S VL + A KN SR + LC G LE+AL+ L
Sbjct: 27 PRTRVRCDVLAASGHVLEAASAPRGA-KNSRSRAPRTDVDVQIERLCRAGELEEALRLLG 85
Query: 85 SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT---MSHLSVRLGNAFLSMFV 141
S VD + +V+LC R + G H +V + + LG + M+V
Sbjct: 86 SDG-----VDARSYGAVVQLCSDLRSLEAGKRAHFLVRASGVGKDGMDSVLGRKLVLMYV 140
Query: 142 KFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTF 200
K GDL +A VF +M D+ W L+ GYAKAG F + + L+++M GV+PD +
Sbjct: 141 KCGDLENARKVFDEMPQVSDVRVWTSLMSGYAKAGEFQDGVLLFRQMH-CSGVRPDAHAI 199
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
CVL+ G+ + G+ VH ++ + G V NALI +Y +CG + + VFDGMP
Sbjct: 200 SCVLKCIAGLGSIADGEVVHGYLEKLGLGVQCAVGNALIALYSRCGHVDGSLQVFDGMPH 259
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
RD ISWN++ISG F NG + K + LF M ++ + +T+ V+ A +G +GR +
Sbjct: 260 RDVISWNSVISGCFSNGWHGKSIELFAKMWSEGLEINPVTMLGVLPACAELGYNLVGRVL 319
Query: 321 HGYVIKMGF---------SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
HGY +K G D ++ + L+ MY+ G KVF M SK ++ +W M
Sbjct: 320 HGYSVKTGLLWEFESLENGIDENLGSKLVFMYVKCGELGYARKVFDAMSSKSNLHAWNLM 379
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y +++ ++ M G PDE TI+ +L L + G+ +H ++ G
Sbjct: 380 MGGYAKLGKFQESLLLFEKMHDCGITPDEHTISCLLKCITGLSGVMDGLVVHGYLVKYGF 439
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + N LI Y+K I+ AL VF ++P +++ISW SII G N +A+ F +
Sbjct: 440 GAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVR 499
Query: 491 MMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L + +S TL+S++ AC + G +H +++R G+ + L NALLDMY C
Sbjct: 500 MWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSD 559
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F N +++V +W ++T Y G F++M
Sbjct: 560 WRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEM 601
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 152/264 (57%), Gaps = 2/264 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG+ + M+VK G+LG+A VF M + +L +WN+++GGYAK G F E+L L+++M
Sbjct: 343 LGSKLVFMYVKCGELGYARKVFDAMSSKSNLHAWNLMMGGYAKLGKFQESLLLFEKMHDC 402
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G + PD +T C+L+ G+ + G VH +++++G+ A V NALI+ Y K +
Sbjct: 403 G-ITPDEHTISCLLKCITGLSGVMDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIED 461
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +VFD MP+RD ISWN++I G NG Y K + LF+ M + D TL SV+ A
Sbjct: 462 ALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQ 521
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G VHGY ++ G + S+ N L+ MY + + K+F ME K+VVSWT M
Sbjct: 522 SHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAM 581
Query: 371 ISCYEGSVLPDKAVETYQMMEAEG 394
I+ Y + DK +Q M EG
Sbjct: 582 ITSYTRAGHFDKVAGLFQEMGLEG 605
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 13/267 (4%)
Query: 339 LIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY+ G+ E KVF M + DV WT+++S Y + V ++ M G P
Sbjct: 135 LVLMYVKCGDLENARKVFDEMPQVSDVRVWTSLMSGYAKAGEFQDGVLLFRQMHCSGVRP 194
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D I+ VL A LG++ G +H + GL + N LI +YS+C +D +L+VF
Sbjct: 195 DAHAISCVLKCIAGLGSIADGEVVHGYLEKLGLGVQCAVGNALIALYSRCGHVDGSLQVF 254
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALM 516
+P ++VISW S+I G N +++ F KM L+ N VT++ +L ACA +G +
Sbjct: 255 DGMPHRDVISWNSVISGCFSNGWHGKSIELFAKMWSEGLEINPVTMLGVLPACAELGYNL 314
Query: 517 CGKEIHAHALRIGV---------AFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVS 565
G+ +H ++++ G+ D L + L+ MYV+CG + A F+ S++ ++
Sbjct: 315 VGRVLHGYSVKTGLLWEFESLENGIDENLGSKLVFMYVKCGELGYARKVFDAMSSKSNLH 374
Query: 566 AWNILLTGYAERGQGALAEEFFRKMID 592
AWN+++ GYA+ G+ + F KM D
Sbjct: 375 AWNLMMGGYAKLGKFQESLLLFEKMHD 401
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 255/489 (52%), Gaps = 12/489 (2%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R +G LH+ + K+ S V + N+ ++++ K L A +VF ++ ++D+ SWN +I
Sbjct: 20 RSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78
Query: 169 GGYAKAG--FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
GY++ G + L+QRM P+ +TF V + D G+ H I+
Sbjct: 79 NGYSQHGPSGSSHVMELFQRM-RAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKM 137
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
DV V ++L+ MY K G AR VFD MP+R+ +SW MISGY + L LF
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197
Query: 287 IMMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
+MR + +SV+SA ELV + G+++H +K G VSV N L+ MY
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNN---GKQIHCIAVKNGLLSIVSVGNALVTMY 254
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G+ ++ + F K+ ++W+ MI+ S DKA++ + M G P E T
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
V++AC+ LG G ++H ++ G S I + L+DMY+KC I A + F + +
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIH 522
+++ WTS+I G N + +AL + +M M + PN +T+ S+L AC+ + AL GK+IH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
A ++ G + + +AL MY +CG +K F RDV +WN +++G ++ G G
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494
Query: 582 LAEEFFRKM 590
A E F +M
Sbjct: 495 EALELFEEM 503
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 4/402 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H+V K S V +G++ ++M+ K G A VF M +R+ SW +I GYA
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADV 232
EAL L+ R+ + + F VL +P+L GK++H ++ G + V
Sbjct: 187 QKLAAEALGLF-RLMRREEEGENEFVFTSVLSALT-LPELVNNGKQIHCIAVKNGLLSIV 244
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+TMY KCG L A F+ ++ I+W+AMI+G ++G+ K L LF M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLS 304
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P T VI+A +G G++VH Y++K+GF + V L+ MY + +
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ D+V WT+MI Y + + A+ Y ME EG +P+E+T+ASVL AC+ L
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+ G ++H ++ G + I + L MY+KC C+ VF ++P ++VISW ++I
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
GL N EAL F +M L KP+ VT V+ILSAC+ +G
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++ALK SM I E V ++ C EG +H + K + +
Sbjct: 288 SGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K + A F + + D+ W +IGGY + G ++ALSLY RM + G
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRM-EMEG 406
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T VL+ C + L++GK++H +++G+ +V + +AL TMY KCG L
Sbjct: 407 ILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGT 466
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF MP RD ISWNAMISG +NG + L LF M+ PD++T +++SA +G
Sbjct: 467 LVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E AL M+ I +E + ++++ C ++G +H+ K L V +
Sbjct: 389 NGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPI 448
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A +M+ K G L VF +M RD+ SWN +I G ++ G EAL L++ M + G
Sbjct: 449 GSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM-QLEG 507
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KPD TF +L C + ++RG + FG + V+ ++ + + G L A
Sbjct: 508 TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 287/547 (52%), Gaps = 20/547 (3%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICV--DEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
S + LC++ +AL + + + D + L +++ C + G LHS V
Sbjct: 5 STIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVV 64
Query: 123 KTMSHLSVRL-GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EA 180
K H+S + A L+M+ K G L +F + D WN+++ GY+++G D +
Sbjct: 65 K-QGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADV 123
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ +++ M G V P T VL C +L GK VH +VI+ G+E D NAL++
Sbjct: 124 MKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVS 183
Query: 241 MYVKCGDLV-RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCG + A VFD + +D +SWNAMI+G ENG + LF +M + V P++
Sbjct: 184 MYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYA 243
Query: 300 TLSSVISASELVGD---EKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKV 355
T+++++ + + GR++H YV++ S DVSVCN L+ YL G +E E +
Sbjct: 244 TVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESL 303
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGN 414
F M+++D+VSW T+I+ Y + K++ + ++ E + D +T+ S+L ACA L N
Sbjct: 304 FWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDN 363
Query: 415 LDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII- 472
L G ++H +R L N L+ Y+KC I++A F I K++ISW SI+
Sbjct: 364 LQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILD 423
Query: 473 -LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + ++ F +L+ + L+++P+SVT+++I+ CA + + KEIH +++R G
Sbjct: 424 AFGEKRHHSRFLSLLHVM-LKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSL 482
Query: 532 FDGFLP---NALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEF 586
P NA+LD Y +CG ++ A F S +R++ N L++GY G A
Sbjct: 483 LCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMI 542
Query: 587 FRKMIDS 593
F M ++
Sbjct: 543 FSGMSET 549
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 285/598 (47%), Gaps = 67/598 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE------GLYL 117
N+ + L NG L++A M + ++ + + N++ +C +DE G +
Sbjct: 211 NAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCA---SFDENIAHRCGRQI 267
Query: 118 HSVVSKTMSHLS--VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
HS V + LS V + NA LS ++K G A +F M RDL SWN +I GYA G
Sbjct: 268 HSYVLQ-WPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNG 326
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVD 233
+ ++L ++ + + + D T +L C + +L+ GK+VH +++R F +E D
Sbjct: 327 EWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFE-DTS 385
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
NAL++ Y KCG + A F + ++D ISWN+++ + E + + L L +M ++
Sbjct: 386 AGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLD 445
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG------------------------- 328
+ PD +T+ ++I + K +E+HGY I+ G
Sbjct: 446 IRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIE 505
Query: 329 -----FSD-----DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
F + ++ CN LI Y+ G+ + +FS M D+ +W M+ Y +
Sbjct: 506 YANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAEND 565
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
P++A+E + ++ +G PD +TI S++ C + ++ L + H +R+ + +
Sbjct: 566 CPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKG 624
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
TL+D Y+KC I A ++F DK+++ +T++I G ++ S +AL F M+ + +KP
Sbjct: 625 TLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP 684
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKP 552
+ V SILSAC+ G + G +I +I G P ++D+ R G +
Sbjct: 685 DHVIFTSILSACSHAGRIAEGLKIFDSIEKI----HGMKPTIEQFACVVDLLARGGHVSE 740
Query: 553 AWNQFNS--NERDVSAWNILLTG---YAERGQGAL-AEEFFRKMIDSKGNWRKLMGLF 604
A++ E + + W LL Y E G + A++ F+ + GN+ L L+
Sbjct: 741 AYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLY 798
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCGKEIH 522
++W S I L +++R EAL FF + + KP+ L +IL +C+ + A GK +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQG- 580
++ ++ G ALL+MY +CG + F+ R D WNI+L+GY+ G+
Sbjct: 61 SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120
Query: 581 ALAEEFFRKMIDS 593
A + FR M S
Sbjct: 121 ADVMKVFRAMHSS 133
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 253/478 (52%), Gaps = 12/478 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H +S S +V LGN + + K G + A F + ++ +SW ++ YA+ G
Sbjct: 46 IHDRISGAAS-ANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGH 104
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVV 235
+ AL LY+RM ++P+ + VL C + L+ GK +H + G + DV +
Sbjct: 105 YRAALDLYKRM----DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILE 160
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+L+TMY KCG L A+ +F+ M R SWNAMI+ Y ++G + + + L+ ++ V+
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVE 217
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P T +SV+SA +G GR++H + G D+S+ N L+ MY ++ K+
Sbjct: 218 PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI 277
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F R+ +DVVSW+ MI+ + + L D+A+E Y M+ EG P+ T ASVL ACA +G+L
Sbjct: 278 FQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL 337
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +H + G ++ L+D+Y+ +D+A +F QI +++ WT +I G
Sbjct: 338 RAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGY 397
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLV--SILSACARIGALMCGKEIHAHALRIGVAFD 533
L +R+M K + ++ ++SACA +GA ++ H+ G+ D
Sbjct: 398 SKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISD 457
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L +L++MY R G ++ A F+ + RD AW L+ GYA+ G+ LA +++M
Sbjct: 458 FVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEM 515
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 272/530 (51%), Gaps = 28/530 (5%)
Query: 57 SIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
+IA KN S L NG AL D + +++ + ++ C + +E
Sbjct: 83 AIARKNDYSWGSMLTAYAQNGHYRAAL---DLYKRMDLQPNPVVYTTVLGACASIKALEE 139
Query: 114 GLYLHSVVSKTMS-HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +HS +S T L V L N+ L+M+ K G L A +F +M R + SWN +I YA
Sbjct: 140 GKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYA 199
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G F+EA+ LY+ M V+P V TF VL C + L +G+++H + G E D+
Sbjct: 200 QSGHFEEAIRLYEDM----DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 255
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ NAL+TMY +C L A +F +P+RD +SW+AMI+ + E + + + + M+
Sbjct: 256 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 315
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V P++ T +SV+ A VGD + GR VH ++ G+ + L+ +Y S+G+ +E
Sbjct: 316 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEA 375
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACAC 411
+F ++E++D WT +I Y +E Y+ M+ +P +I + V+SACA
Sbjct: 376 RSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACAS 435
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG + H G+IS ++A +L++MYS+ ++ A +VF ++ ++ ++WT++
Sbjct: 436 LGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTL 495
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I G + AL +++M L +P+ +T + +L AC+ G GK+ L I +
Sbjct: 496 IAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQ-----LFISI 550
Query: 531 AFD-GFLPN-----ALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILL 571
D PN ++D+ R GR+ A N+ DV+ W+ LL
Sbjct: 551 QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVT-WSSLL 599
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 208/391 (53%), Gaps = 13/391 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
LR C DL+ +++H I A+V + N ++ Y KCG + AR FD + +++
Sbjct: 33 ALRQC---QDLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN 88
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
SW +M++ Y +NG Y L L+ M + P+ + ++V+ A + + G+ +H
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHS 145
Query: 323 YVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+ G DV + N L+ MY G+ E+ +++F RM + V SW MI+ Y S +
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFE 205
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+ Y+ M+ E P T SVLSAC+ LG LD G K+H L G + + N L+
Sbjct: 206 EAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALL 262
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
MY++CKC+D A ++F ++P ++V+SW+++I + EA+ F+ KM L ++PN
Sbjct: 263 TMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYY 322
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T S+L ACA +G L G+ +H L G AL+D+Y G + A + F+
Sbjct: 323 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 382
Query: 561 E-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
E RD W +L+ GY+++G E +R+M
Sbjct: 383 ENRDEGLWTVLIGGYSKQGHRTGVLELYREM 413
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 262/523 (50%), Gaps = 15/523 (2%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L L SMQ + D+ V+ + C R G +H++V + V LG A ++M
Sbjct: 186 LALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTM 245
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ + G L A +F +M +R++ SWN ++ F EA+ L++RM V V+P +
Sbjct: 246 YGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVS 305
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
F VL L G+ +H + + ++V NAL+TMY +CG + A VF M
Sbjct: 306 FITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAME 365
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+RD +SWNAMIS Y ++G + + LF MR V PD +T + A + D GR
Sbjct: 366 RRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRT 425
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNR--------EEGEKVFSRMESKDVVSWTTMI 371
VH ++ GF +SV N + +Y S + E +F M ++DV+SW TMI
Sbjct: 426 VHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMI 485
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-- 429
+ Y + A+ ++ M EG +++T S+LS C L G +H+ +
Sbjct: 486 TGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPE 545
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L S I+A +++MY KC +D A +F +N+ SW S+I L+ R+ +A
Sbjct: 546 LSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSE 605
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M + P+ VT +++L+AC GA+ GK IHA + G+ D + NAL++ Y +CG
Sbjct: 606 RMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCG 665
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + F + + RDV +WN ++ G+A G A E + M
Sbjct: 666 NLDTATSLFGALDYRDVVSWNGIIAGFAHNGH---AREALKSM 705
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 251/523 (47%), Gaps = 19/523 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L+R C ++G +H V + S+ GN ++M+ + L A VF +M +RD
Sbjct: 4 LMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERD 63
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW +I YA+ G +AL L+ M + P+ TF +L C L+ GK++H
Sbjct: 64 VVSWTAMISAYAQTGHQRQALDLFTEMAG-SSLDPNRVTFLALLEACDSPEFLEDGKQIH 122
Query: 221 VHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
V E+DV V NA++ MY KC A VF M +RD ISWN I+ E+G+Y
Sbjct: 123 ARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDY 182
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCN 337
L L M+ + PD +T S ++A +G L GR +H V++ G DV +
Sbjct: 183 TFTLALLKSMQLEGMAPDKVTFVSALNAC--IGSRSLSNGRLIHALVLERGMEGDVVLGT 240
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM- 396
L+ MY G E ++F RM ++VVSW M++ + +A+E ++ M A +
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVE 300
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P ++ +VL+A L G ++H + L+S I +AN L+ MY +C + A V
Sbjct: 301 PTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERV 360
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F + ++++SW ++I + + E + F +M + P+ +T + L ACA I L
Sbjct: 361 FSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDL 420
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR--------MKPAWNQFNS-NERDVSA 566
G+ +H ++ G + NA + +Y C M+ F S RDV +
Sbjct: 421 DSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVIS 480
Query: 567 WNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
WN ++TGY + G A F++M+ +GN M L C
Sbjct: 481 WNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVC 523
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 231/480 (48%), Gaps = 25/480 (5%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG +H+++ + + + NA ++M+ + G +G A VF M RDL SWN +I YA
Sbjct: 321 EGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYA 380
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G E ++L+ RM V PD TF L C + DL G+ VH + G+ + +
Sbjct: 381 QSGLAREVVNLFHRM-RAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCI 439
Query: 233 DVVNALITMYVKCGDLVRARL--------VFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
V NA + +Y C + +F+ M RD ISWN MI+GY + G+ L
Sbjct: 440 SVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALS 499
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKM 342
+F M + + +T S++S + + G +H VI S D V ++ M
Sbjct: 500 IFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNM 559
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G + +F +++ SW +MIS Y ++A + + M EG +PD +T
Sbjct: 560 YGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTF 619
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
++L+AC G + G +H + +GL ++AN L++ YSKC +D A +F +
Sbjct: 620 ITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDY 679
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
++V+SW II G N + EAL M + ++P+++T ++ILSA + G L G +
Sbjct: 680 RDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDD 739
Query: 522 HA-----HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS---AWNILLTG 573
H L GV G ++D+ R GR+ A F S RD +W LL+
Sbjct: 740 FVSMAVDHELERGVEHYG----CMIDLLGRAGRIGDA-EYFVSAMRDEDKEVSWMTLLSA 794
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
A ++ AC G L+ G ++H R + N L++MY +C +D+A +VF ++ +
Sbjct: 2 ARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE 61
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
++V+SWT++I +AL F +M +L PN VT +++L AC L GK+I
Sbjct: 62 RDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQI 121
Query: 522 HAH--ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
HA AL++ + D + NA++ MY +C R A F+ ERD+ +WN + AE G
Sbjct: 122 HARVSALQL-LESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESG 180
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 44/280 (15%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
++TS + NS ++ L+G EQA + M+ + D + L+ C
Sbjct: 574 EDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVR 633
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ + + + NA ++ + K G+L A +FG + RD+ SWN +I G+A
Sbjct: 634 HGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFA 693
Query: 173 KAGFFDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGY 228
G EAL + W+ GV+PD TF +L L++G + V + +
Sbjct: 694 HNGHAREAL----KSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHEL 749
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR-ISWNAMISGYFENGEYMKGLMLFI 287
E V+ +I + + G + A M D+ +SW
Sbjct: 750 ERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSW--------------------- 788
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
MTL +SA E+ GDE+ + V G +++M
Sbjct: 789 -----------MTL---LSACEVHGDEERAKRVAGSIVEM 814
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 245/473 (51%), Gaps = 5/473 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
S+ +S R + LS V G + A F + F NV+I G+A A +A
Sbjct: 46 ASRPISSSGSRPKSLILS-HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDA 104
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L+ Y+ M G +PD +TFP VL+ C L G+ H VI+ G ADV N+L+
Sbjct: 105 LAAYRAML-DAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVA 163
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFM 299
+Y K G + A VFDGMP RD +SWN M+ GY NG L F M + L V D +
Sbjct: 164 LYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSV 223
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+ + ++A L LGRE+HGY I+ G DV V L+ MY GN E VF++M
Sbjct: 224 GVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKM 283
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ VV+W MI Y + P A + + M +G + +T ++L+ACA + G
Sbjct: 284 PLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGR 343
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H +R + ++++ L++MY K ++ + ++F QI DK ++SW ++I
Sbjct: 344 SVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYME 403
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA+ F +++ L P+ T+ +++ A +G++ K++H++ +++G + N
Sbjct: 404 MYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463
Query: 539 ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A++ MY RCG + + F+ +DV +WN ++ GYA GQG +A E F +M
Sbjct: 464 AVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEM 516
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 244/524 (46%), Gaps = 20/524 (3%)
Query: 6 CAKTSQTPLRQNLRNPKTRI---------PETSFYFKPKTRHFSSKNAQSVQVLNTQNTS 56
CA T P+TR P +S +PK+ S A ++ +
Sbjct: 20 CASQHLTAATSKEPPPRTRPKHGEGGASRPISSSGSRPKSLILSHVAAGR---MDEAADA 76
Query: 57 SIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN------LVRLCEWKRG 110
P + L+ + + G + L LD++ +D A + +++ C
Sbjct: 77 FAGVTRPGAFLHNVMIRGFADADLP-LDALAAYRAMLDAGARPDRFTFPVVLKCCARAGA 135
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
EG H+ V K V N+ ++++ K G +G A VF M RD+ SWN ++ G
Sbjct: 136 LGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDG 195
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y G AL+ ++ M V D L C L G+E+H + IR G E
Sbjct: 196 YVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQ 255
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V +L+ MY KCG++ A VF MP R ++WN MI GY N + F+ MR
Sbjct: 256 DVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMR 315
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ +T ++++A GR VH YV++ F V + L++MY G E
Sbjct: 316 VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVE 375
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
EK+F ++ K +VSW MI+ Y + +A+ + + + PD T+ +V+ A
Sbjct: 376 SSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFV 435
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG++ ++H ++ G +I N ++ MY++C I + E+F ++P K+VISW +
Sbjct: 436 LLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNT 495
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
II+G ++ + AL F +M + ++PN T VS+L+AC+ G
Sbjct: 496 IIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+NL+ C G +H+ V + V L A L M+ K G + + +FG++ D
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITD 386
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ L SWN +I Y + EA++L+ + + PD +T V+ + +++ K+
Sbjct: 387 KTLVSWNNMIAAYMYMEMYQEAIALFLELL-NQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++++ GY ++NA++ MY +CG++V +R +FD MP +D ISWN +I GY +G+
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQ 505
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
L +F M+ ++P+ T SV++A + G E G
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
+D+A + F + +I G + +AL +R M+ +P+ T +L
Sbjct: 70 MDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKC 129
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
CAR GAL G+ HA +++G+ D + N+L+ +Y + G + A F+ RD+ +W
Sbjct: 130 CARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSW 189
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY G GALA FR+M D+
Sbjct: 190 NTMVDGYVSNGMGALALACFREMNDA 215
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 275/549 (50%), Gaps = 7/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M+ L I D +++ C Y GL +H + +
Sbjct: 139 NSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQ 198
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G A + M+ L HA+ +F +M +R+ W+ +I GY + F E L L
Sbjct: 199 MGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKL 258
Query: 184 YQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
Y+ M G GV TF R+C G+ + G ++H + ++ + D V A + MY
Sbjct: 259 YKVMLDEGMGVSQA--TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMY 316
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC +V AR VF+ P R S NA+I GY + ++ L +F +++ +D D ++LS
Sbjct: 317 AKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLS 376
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++A + G ++HG +K G ++ V N ++ MY G E +F ME K
Sbjct: 377 GALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK 436
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + ++ + + M PD+ T SV+ ACA L+ G+++H
Sbjct: 437 DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVH 496
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++G+ + + +IDMY KC + +A ++ ++ ++ +SW SII G +
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGE 556
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
AL +F +M+ + + P++ T ++L CA + + GK+IH L++ + D ++ + ++
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIV 616
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG M+ + F + +RD W+ ++ YA G G A + F +M + K N
Sbjct: 617 DMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHT 676
Query: 599 KLMGLFRKC 607
+ + R C
Sbjct: 677 IFISVLRAC 685
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 241/460 (52%), Gaps = 3/460 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + G++ A ++F M +RD+ SWN ++ Y + GF +++ ++ +M + +
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLL-EI 166
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D TF VL+ C G+ D G +VH I+ G+++DV AL+ MY C L A
Sbjct: 167 QHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFN 226
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F MP+R+ + W+A+I+GY N + +GL L+ +M + + T +S + +
Sbjct: 227 IFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSA 286
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG ++H Y +K F D V + MY + KVF+ + S +I
Sbjct: 287 FELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVG 346
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y +A+E ++ ++ DEI+++ L+AC+ + GI+LH LA++ GL
Sbjct: 347 YARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFN 406
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I +ANT++DMY+KC + +A +F + K+ +SW +II N E L F M+
Sbjct: 407 ICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLR 466
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ ++P+ T S++ ACA AL G E+H ++ G+ D F+ +A++DMY +CG +
Sbjct: 467 STMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVE 526
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A ER +WN +++G++ QG A +F +M+
Sbjct: 527 AEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRML 566
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 247/521 (47%), Gaps = 13/521 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + LK M + + V + + R C ++ G LH+ KT +
Sbjct: 249 NDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV 308
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L M+ K + A VF + S N LI GYA+ EAL ++ R
Sbjct: 309 GTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIF-RSLQKSY 367
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + L C + G ++H ++ G + ++ V N ++ MY KCG L+ A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEAC 427
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+FD M +D +SWNA+I+ + +N + L LF+ M ++PD T SV+ A
Sbjct: 428 LIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKK 487
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G EVHG VIK G D V + +I MY G E EK+ R+E + VSW ++IS
Sbjct: 488 ALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIIS 547
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + A+ + M G +PD T A+VL CA L ++LG ++H ++ L S
Sbjct: 548 GFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHS 607
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ IA+T++DMYSKC + + +F + P ++ ++W+++I + +A+ F +M
Sbjct: 608 DVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQ 667
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVR 546
L N+KPN +S+L ACA +G + G H R + G P + ++D+ R
Sbjct: 668 LQNVKPNHTIFISVLRACAHMGFVDKG----LHYFREMRSHYGLDPQMEHYSCMVDLLGR 723
Query: 547 CGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
G++ A S E D W LL +G +AE+
Sbjct: 724 SGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEK 764
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 221/440 (50%), Gaps = 4/440 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ S+Q+ + DE +L + C +GY EG+ LH + K ++ + N L
Sbjct: 355 EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTIL 414
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A +F M +D SWN +I + + +E L+L+ M ++PD
Sbjct: 415 DMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLR-STMEPDD 473
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
YTF V++ C G L G EVH VI+ G D V +A+I MY KCG LV A + +
Sbjct: 474 YTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHER 533
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ +R +SWN++ISG+ + L F M +V V PD T ++V+ + +LG
Sbjct: 534 LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELG 593
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++HG ++K+ DV + + ++ MY GN ++ +F + +D V+W+ MI Y
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH 653
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L + A++ ++ M+ + P+ SVL ACA +G +D G+ ++ GL +
Sbjct: 654 GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEH 713
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ ++D+ + +++ALE+ +P + + + W +++ RL + E +L L
Sbjct: 714 YSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG-NVEVAEKAANSLLQL 772
Query: 496 KPNSVTLVSILSACARIGAL 515
P + +LS I +
Sbjct: 773 DPQDSSAYVLLSNVYAIAGM 792
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 206/428 (48%), Gaps = 33/428 (7%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC------------- 245
TF + + C + + GK+ H + G+ V V N L+ Y KC
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 246 ------------------GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
G++ A+ +FD MP+RD +SWN+M+S Y +NG + K + +F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
MR + + D+ T + V+ A + D LG +VH I+MGF DV L+ MY +
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +F M ++ V W+ +I+ Y + + ++ Y++M EG + T AS
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L +LG +LH A++T I+ +DMY+KC + A +VF+ P+ S
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
++I+G ++ EAL FR + + L + ++L L+AC+ I + G ++H A+
Sbjct: 340 HNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAV 399
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
+ G+ F+ + N +LDMY +CG + A F+ E +D +WN ++ + +
Sbjct: 400 KCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLA 459
Query: 586 FFRKMIDS 593
F M+ S
Sbjct: 460 LFVSMLRS 467
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++T + + C+ L ++ G + H TG + + ++N L+ Y KC ++ A VF
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 459 QIPDKNVISWTSIILGLR-LNNRSFEALIF------------------------------ 487
++P ++VISW ++I G + N F +F
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F KM +L ++ + T +L AC I G ++H A+++G D AL+DMY
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 547 CGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
C ++ A+N F ER+ W+ ++ GY + + ++ M+D
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 258/465 (55%), Gaps = 5/465 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
LS ++K GD+ +A +F ++ RD+ SW+++I GY + GF +++ L+ +M + + P
Sbjct: 32 LLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQM-RISSLVP 90
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+T VL + G+ D G+ VH ++++G ++D VV AL+ Y KCG++V + VF
Sbjct: 91 TSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRVF 150
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + +S +A++SG+ N + + ++LF R++ + P+ T+ ++I A + +
Sbjct: 151 EQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESRR 210
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +HG V+K+ DV+V N ++ MY S + + +VF ME +DV+SWTTMI+
Sbjct: 211 LCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLV 270
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ ++ M G D + + +++SACA LG+L G ++H A+ G S +
Sbjct: 271 CLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSELP 330
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--L 493
+ N++I MYSKC +D + VF Q K+++SWT++ILG N EAL KM
Sbjct: 331 LTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGEE 390
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ +S+ L+ +LSA + L +++H +A G + N+L+ Y +CG ++PA
Sbjct: 391 SFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAYSKCGDVEPA 450
Query: 554 WNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+N F RD+ +WN +L GY G G +A + +M + N
Sbjct: 451 YNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGREN 495
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 201/374 (53%), Gaps = 2/374 (0%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H R+ + +D + L++ Y+K GD++ A +F+ +PKRD +SW+ MI GY NG
Sbjct: 13 IHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGF 72
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
K + LF MR + P T+ V+ + +GD LG+ VHG ++K G D V
Sbjct: 73 RRKSMELFSQMRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTA 132
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ Y GN + +VF ++E+ +VS + ++S + + L ++AV + G +P+
Sbjct: 133 LLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPN 192
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T+ +++ AC L + L +H + ++ L+ + + N+++DMYS +D A VF
Sbjct: 193 AATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFE 252
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLV-SILSACARIGALMC 517
+ ++VISWT++I L + +AL+ FR+M N V +V +++SACA +G L
Sbjct: 253 GMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKR 312
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
G+EIH A+ G + L N+++ MY +CG + + F+ + + + +W ++ G +
Sbjct: 313 GREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQ 372
Query: 577 RGQGALAEEFFRKM 590
G A + KM
Sbjct: 373 NGYPREALKLLIKM 386
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 238/490 (48%), Gaps = 17/490 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H ++ K R+ A L+ + K G++ ++ VF ++ + L S + ++ G+
Sbjct: 111 GQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVY 170
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
F+EA+ L+ + F G+ P+ T ++R C + + + +H V++ DV
Sbjct: 171 NELFEEAVVLFNQ-FRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVA 229
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+++ MY DL A VF+GM RD ISW MI+ LMLF MR
Sbjct: 230 VNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTG 289
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D + + ++ISA ++GD K GRE+H I GF ++ + N +I MY G+ +
Sbjct: 290 ICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSR 349
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACL 412
VF + K +VSWT MI + P +A++ M E S D I + VLSA L
Sbjct: 350 TVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGEL 409
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
L+L +LH A +G Y ++ N+LI YSKC ++ A VF Q+ ++++SW +I
Sbjct: 410 ALLELCQQLHCYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAI 469
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCG-----KEIHAHA 525
+ G +N A+ + +M + P++ T + +LSAC+ G + G + +
Sbjct: 470 LNGYGINGHGEIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERT 529
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGAL 582
+R G ++D+ R G A +F S + +AW LL+G G L
Sbjct: 530 IRPSQDHCG----CIVDLLARAGCFSDA-REFVSRYMEKMGPNAWRALLSGCQLHGNVGL 584
Query: 583 AEEFFRKMID 592
AE R++ +
Sbjct: 585 AELAARRVCE 594
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 6/439 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E+A+ + ++L + + ++ L+R C +H +V K L V +
Sbjct: 171 NELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAV 230
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ L M+ DL A VF M RD+ SW +I + +AL L+++M G
Sbjct: 231 NNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNT-G 289
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ DV ++ C + DLKRG+E+H I G+ +++ + N++I MY KCGDL +R
Sbjct: 290 ICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSR 349
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELV 311
VFD + +SW AMI G +NG + L L I MR E D + L V+SAS +
Sbjct: 350 TVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGEL 409
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTM 370
+L +++H Y + GF V N LI Y G+ E VF +M +D+VSW +
Sbjct: 410 ALLELCQQLHCYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAI 469
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTG 429
++ Y + + AV Y M PD T VLSAC+ G +D G+ + +Q+
Sbjct: 470 LNGYGINGHGEIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERT 529
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFF 488
+ ++D+ ++ C A E + +K +W +++ G +L+ A +
Sbjct: 530 IRPSQDHCGCIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAA 589
Query: 489 RKMMLNLKPNSVTLVSILS 507
R+ + L P V +LS
Sbjct: 590 RR-VCELDPEEPGQVVLLS 607
>gi|242037017|ref|XP_002465903.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
gi|241919757|gb|EER92901.1| hypothetical protein SORBIDRAFT_01g047870 [Sorghum bicolor]
Length = 656
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 245/472 (51%), Gaps = 5/472 (1%)
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
S+ +S R + LS V G + A F + F NV+I G+A A +AL
Sbjct: 47 SRPISSSGSRPKSLILS-HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDAL 105
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ Y+ M G +PD +TFP VL+ C L G+ H VI+ G ADV N+L+ +
Sbjct: 106 AAYRAML-DAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVAL 164
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMT 300
Y K G + A VFDGMP RD +SWN M+ GY NG L F M + L V D +
Sbjct: 165 YAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVG 224
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+ + ++A L LGRE+HGY I+ G DV V L+ MY GN E VF++M
Sbjct: 225 VIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMP 284
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ VV+W MI Y + P A + + M +G + +T ++L+ACA + G
Sbjct: 285 LRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRS 344
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H +R + ++++ L++MY K ++ + ++F QI DK ++SW ++I
Sbjct: 345 VHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEM 404
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EA+ F +++ L P+ T+ +++ A +G++ K++H++ +++G + NA
Sbjct: 405 YQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNA 464
Query: 540 LLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ MY RCG + + F+ +DV +WN ++ GYA GQG +A E F +M
Sbjct: 465 VMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEM 516
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 244/524 (46%), Gaps = 20/524 (3%)
Query: 6 CAKTSQTPLRQNLRNPKTRI---------PETSFYFKPKTRHFSSKNAQSVQVLNTQNTS 56
CA T P+TR P +S +PK+ S A ++ +
Sbjct: 20 CASQHLTAATSKEPPPRTRPKHGEGGASRPISSSGSRPKSLILSHVAAGR---MDEAADA 76
Query: 57 SIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN------LVRLCEWKRG 110
P + L+ + + G + L LD++ +D A + +++ C
Sbjct: 77 FAGVTRPGAFLHNVMIRGFADADLP-LDALAAYRAMLDAGARPDRFTFPVVLKCCARAGA 135
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
EG H+ V K V N+ ++++ K G +G A VF M RD+ SWN ++ G
Sbjct: 136 LGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDG 195
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y G AL+ ++ M V D L C L G+E+H + IR G E
Sbjct: 196 YVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQ 255
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V +L+ MY KCG++ A VF MP R ++WN MI GY N + F+ MR
Sbjct: 256 DVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMR 315
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ +T ++++A GR VH YV++ F V + L++MY G E
Sbjct: 316 VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVE 375
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
EK+F ++ K +VSW MI+ Y + +A+ + + + PD T+ +V+ A
Sbjct: 376 SSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFV 435
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG++ ++H ++ G +I N ++ MY++C I + E+F ++P K+VISW +
Sbjct: 436 LLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNT 495
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
II+G ++ + AL F +M + ++PN T VS+L+AC+ G
Sbjct: 496 IIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+NL+ C G +H+ V + V L A L M+ K G + + +FG++ D
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITD 386
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ L SWN +I Y + EA++L+ + + PD +T V+ + +++ K+
Sbjct: 387 KTLVSWNNMIAAYMYMEMYQEAIALFLELLN-QPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++++ GY ++NA++ MY +CG++V +R +FD MP +D ISWN +I GY +G+
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQ 505
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
L +F M+ ++P+ T SV++A + G E G
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
+D+A + F + +I G + +AL +R M+ +P+ T +L
Sbjct: 70 MDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKC 129
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
CAR GAL G+ HA +++G+ D + N+L+ +Y + G + A F+ RD+ +W
Sbjct: 130 CARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSW 189
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY G GALA FR+M D+
Sbjct: 190 NTMVDGYVSNGMGALALACFREMNDA 215
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 245/461 (53%), Gaps = 7/461 (1%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
+ L +L+ C + GL LH+ V KT + V + N L+M+ K G A VF +
Sbjct: 4 ETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE 63
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M +++L SW+ +I GY +AG A+ LY +MF V P+ Y F V+ C + +
Sbjct: 64 MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV----PNEYVFASVISACASLSAVTL 119
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+++H ++FGYE+ V N+LI+MY+KC A VF P+ + +S+NA+I+G+ E
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N + +GL F +MR+ + PD V+ + K G E+H +K+ +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N +I MY +E EK F +E KDV+SW T+I+ K + ++ M E +
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 396 M-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ PD+ T S L+ACA L ++ G ++H MRT L + + N L++MY+KC CI A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++F ++ N++SW +II G + A+ F +M + ++P+SVT + +L+AC G
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 514 ALMCGK-EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ G+ ++ G+A D + L+DM R GR+ A
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 214/414 (51%), Gaps = 8/414 (1%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T +L C L+ G +H V++ G ++DV + N ++ MY KCG AR VFD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ +SW+AMISGY + GE + L+ M V P+ +SVISA + LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +K G+ V N LI MY+ + VF+ + VS+ +I+ + +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++ +E +++M +G +PD VL C NL G +LH ++ L S I N
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLK 496
+I MYS+ I +A + F I +K+VISW ++I + + L F+ M N++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T S L+ACA + ++ GK+IHAH +R + D + NAL++MY +CG + A++
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 557 FNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ++ +WN ++ G+ G G A E F +M S + + +GL C
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC 415
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 17/359 (4%)
Query: 6 CAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQ--NTSSIATKNP 63
CA S L Q +I S F ++ F S + S+ + Q + S+ T P
Sbjct: 111 CASLSAVTLGQ-------KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP 163
Query: 64 -------NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
N+ + N LE+ L++ M++ + D A + ++ +C G
Sbjct: 164 EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAE 223
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH K + +GN ++M+ + + A F + ++D+ SWN LI +
Sbjct: 224 LHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDD 283
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ L +++ M V+PD +TF L C G+ + GK++H H++R D+ V N
Sbjct: 284 HAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGN 343
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG + A +F M + +SWN +I+G+ +G + + LF M + P
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRP 403
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEK 354
D +T +++A G G+ + + G + D+ + LI M G E E+
Sbjct: 404 DSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE 462
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 258/470 (54%), Gaps = 5/470 (1%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
LS+ + + ++ + G + +A +F ++ R +N +I Y G + EA+ ++ M
Sbjct: 53 LSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEM 112
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
PD YT+P V++ C + ++ G+ +H + + + + V+N+L+ MY+ CG+
Sbjct: 113 LGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGE 172
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD M ++ +SWN MI+GYF+NG L++F M + V+ D ++ SV+ A
Sbjct: 173 VEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPA 232
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + ++GR VHG V + + V N L+ MY G+ +E VF M +DVVSW
Sbjct: 233 CGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSW 291
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+MI+ Y + A+ +++M+ EG P+ +TIA +L ACA L NL G LH M+
Sbjct: 292 TSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMK 351
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L S + + +LIDMY+KC C+ + VF + K + W +++ G N + EA+
Sbjct: 352 QRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGL 411
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM++ ++ N+ T S+L A + L I+++ +R G + + +L+D+Y +
Sbjct: 412 FKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSK 471
Query: 547 CGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG ++ A FN+ + +D+ W+I++ GY G G A F++M+ S
Sbjct: 472 CGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQS 521
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 259/493 (52%), Gaps = 19/493 (3%)
Query: 74 GSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH--SVVSKTMSHLSV 130
G +A+K +L+ + + C D +++ C + G LH ++VSK SHL V
Sbjct: 100 GDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ L+M++ G++ A VF M ++ + SWN +I GY K GF + AL ++ +M
Sbjct: 160 L--NSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMV-D 216
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV+ D + VL CG + +L+ G+ VH ++ V NAL+ MY KCG +
Sbjct: 217 SGVEIDGASVVSVLPACGYLKELEVGRRVH-GLVEEKVLGKKIVSNALVDMYAKCGSMDE 275
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARLVFD M +RD +SW +MI+GY NG+ L LF +M+ + P+ +T++ ++ A
Sbjct: 276 ARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACAS 335
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + K GR +HG+V+K +V+V LI MY VF+R K V W +
Sbjct: 336 LNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNAL 395
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+S + L +A+ ++ M EG + T S+L A L +L ++ MR+G
Sbjct: 396 LSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGF 455
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFF 488
+S I +A +LID+YSKC ++ A ++F+ IP +++ W+ II G ++ A+ F
Sbjct: 456 VSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLF 515
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLD 542
++M+ + +KPN VT S+L +C+ G + G + L+ +PN ++D
Sbjct: 516 KQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQT----IPNDDHYTCMVD 571
Query: 543 MYVRCGRMKPAWN 555
+ R GRM A++
Sbjct: 572 LLGRAGRMDEAYD 584
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 213/403 (52%), Gaps = 7/403 (1%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P + +L+ G L K++H H+I G +D+ + L+ Y CG + AR
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGL-LSIDIRSVLVATYAHCGYVHNAR 75
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISA-SEL 310
+FD + +R + +N MI Y G+Y + + +F+ M+ PD T VI A SEL
Sbjct: 76 KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSEL 135
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ E GR +HG + F + V N L+ MY++ G EE KVF M+ K VVSW TM
Sbjct: 136 LLVE-YGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTM 194
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y + + A+ + M G D ++ SVL AC L L++G ++H L + +
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKV 253
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I++N L+DMY+KC +D+A VF + +++V+SWTS+I G LN + AL F+
Sbjct: 254 LGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKI 313
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + L+PNSVT+ IL ACA + L G+ +H ++ + + + +L+DMY +C
Sbjct: 314 MQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNC 373
Query: 550 MKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMI 591
+ +++ F R + WN LL+G A F+KM+
Sbjct: 374 LGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKML 416
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 204/405 (50%), Gaps = 13/405 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N NG AL + M + + +D ++V+++ C + + + G +H +V +
Sbjct: 192 NTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEE 251
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + NA + M+ K G + A VF M +RD+ SW +I GY G ALSL
Sbjct: 252 KVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSL 310
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M + G++P+ T +L C + +LK G+ +H V++ ++V V +LI MY
Sbjct: 311 FKIM-QIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYA 369
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC L + VF ++ + WNA++SG N + + LF M V+ + T +S
Sbjct: 370 KCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNS 429
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ES 361
++ A ++ D + ++ Y+++ GF ++ V LI +Y G+ E K+F+ + +
Sbjct: 430 LLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDV 489
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+ W+ +I+ Y + AV ++ M G P+++T SVL +C+ G +D G+ L
Sbjct: 490 QDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL 549
Query: 422 HQLAMRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP 461
+ ++ + I N ++D+ + +D+A ++ +P
Sbjct: 550 FKFMLK----DHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMP 590
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 260/524 (49%), Gaps = 13/524 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
SLEQA K M+ + V LV+ C + G+ LH ++ S + L N
Sbjct: 181 SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 240
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A ++M+ + G L A +F M +RD+ +WN LI Y + G +EA+ LYQ M G K
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQ-EGCK 299
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD TF +L G L K VH H++ G ++ + AL+ MY KC L R +
Sbjct: 300 PDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWL 359
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ MP+R+ ISWN M++ Y ++G K + + M+ V PD +T +++ D
Sbjct: 360 FEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADL 419
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
KLGR+VHG++ + D+ + N L+ MY G E+ E VF + ++V+SWT M++ Y
Sbjct: 420 KLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAY 479
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
D A+ + + G P IT L AC L G +H A+++G + +
Sbjct: 480 SRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDV 539
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + L+ MY +C I A F KN ++W+++I + + E L R M
Sbjct: 540 SLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQ 599
Query: 493 --LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD---GFLPNALLDMYVRC 547
L++ P T S LSAC+ + L GK IH++ FD + N+L+ MY +C
Sbjct: 600 QGLDMSP--ATFASTLSACSNLADLREGKRIHSYVRE--RRFDTEAATVTNSLVTMYGKC 655
Query: 548 GRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
G + A F ++ R D+ WN +++GYA+ GQ A E F +M
Sbjct: 656 GSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRM 699
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 266/503 (52%), Gaps = 11/503 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L+ + CE + G +H +++++ + L NA +SM+ G + A VF
Sbjct: 100 DNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVF 159
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R++ +W +IG +A+ ++A ++ R+ + G K + T+ +++ C L
Sbjct: 160 DAMPARNVITWTAMIGAHAETS-LEQAFKVF-RLMELEGFKSNFVTYVTLVQACSKPEFL 217
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G +H+ + + + NALITMY +CG L AR +F M +RD I+WNA+I+ Y
Sbjct: 218 EVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEY 277
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS---ELVGDEKLGREVHGYVIKMGFS 330
++G + ++L+ +M + PD +T ++++ S E + D KL VH ++++ G S
Sbjct: 278 GQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKL---VHSHIVESGVS 334
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++++ L+ MY + E+ +F +M ++V+SW M++ Y L KAV+ + M
Sbjct: 335 INIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYM 394
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ +G PD +T +L+ C +L LG K+H + +I+ N+L++MY +C +
Sbjct: 395 QLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEV 454
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
++A VF I +NVISWT+++ NR AL+ F + L+ +KP +T + L AC
Sbjct: 455 EQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDAC 514
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAW 567
AL G+ +H+ A++ G D L +AL+ MY RCG ++ A F+ E ++ W
Sbjct: 515 VGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTW 574
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
+ ++ + + GQ + R M
Sbjct: 575 SAMIAAFVQHGQDREGLQHLRFM 597
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 247/494 (50%), Gaps = 4/494 (0%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V L++ C + D LHS + + V LGN + + K L AW F +M
Sbjct: 4 VRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 63
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++++W +IG A A+ L ++M + GVKPD T L +C L GK
Sbjct: 64 KNVYTWTAIIGVCAHHHCHSLAIILLRQML-LEGVKPDNITLLAALTSCETSQALPAGKL 122
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + + G++ D+ + NAL++MY CG + A+ VFD MP R+ I+W AMI + E
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETS- 181
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ +F +M +F+T +++ A ++G +H ++ + + +CN
Sbjct: 182 LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNA 241
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI MY G E+ +FS M +D+++W +I+ Y ++AV YQ+M EG PD
Sbjct: 242 LITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPD 301
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++T ++L+ L +H + +G+ I + L+ MYSKC+ ++ +F
Sbjct: 302 KVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFE 361
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
++P +NVISW ++ + +A+ M L+ +KP++VT V +L+ C L
Sbjct: 362 KMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKL 421
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAE 576
G+++H D L N+LL+MY RCG ++ A F+ +R+V +W +LT Y+
Sbjct: 422 GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR 481
Query: 577 RGQGALAEEFFRKM 590
+ + +A F +
Sbjct: 482 QNRQDMALLLFHAI 495
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 252/495 (50%), Gaps = 8/495 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + E +G +E+A+ M + D+ V L+ + + +HS + +
Sbjct: 271 NALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVE 330
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +++ LG A ++M+ K L ++F KM R++ SWNV++ YAK G +A+ +
Sbjct: 331 SGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQI 390
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + GVKPD T +L C G DLK G++VH + EAD+ + N+L+ MY
Sbjct: 391 TEYM-QLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYG 449
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG++ +A +VFDG+ +R+ ISW AM++ Y L+LF + V P +T
Sbjct: 450 RCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLE 509
Query: 304 VISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME- 360
+ A VG E L GR VH ++ G DVS+ + L+ MY G+ + + F E
Sbjct: 510 ALDAC--VGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEV 567
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K+ V+W+ MI+ + + ++ + M+ +G T AS LSAC+ L +L G +
Sbjct: 568 RKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKR 627
Query: 421 LHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H + R + N+L+ MY KC +D A EVF +++I W +II G +
Sbjct: 628 IHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHG 687
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
++ +A+ F +M + P+ VT V ILS C+ G L G +A + +G+
Sbjct: 688 QTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYA 747
Query: 539 ALLDMYVRCGRMKPA 553
++D+ R G+++ A
Sbjct: 748 CVIDLLGRAGKLQEA 762
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 3/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +A++ + MQ + D V L+ +C G +H +++ + L
Sbjct: 381 HGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLIL 440
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ L+M+ + G++ A VF + R++ SW ++ Y++ D AL L+ + + G
Sbjct: 441 WNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIH-LSG 499
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP TF L C G L +G+ VH ++ G + DV + +AL+ MY +CG + A+
Sbjct: 500 VKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAK 559
Query: 253 LVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
FD +++ ++W+AMI+ + ++G+ +GL M++ +D T +S +SA +
Sbjct: 560 ACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNL 619
Query: 312 GDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D + G+ +H YV + F ++ +V N L+ MY G+ + +VF +D++ W +
Sbjct: 620 ADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAI 679
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y AVE + M+ EG PD +T +LS C+ G LD G+ + + GL
Sbjct: 680 ISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGL 739
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ID+ + + +A E + + I + +L
Sbjct: 740 EPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLL 782
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 141/278 (50%), Gaps = 3/278 (1%)
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+ R +H +++ + V + N LI Y + ++ + F RM K+V +WT +I
Sbjct: 18 IARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTWTAIIGVCA 77
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ + M EG PD IT+ + L++C L G +H L ++G +I
Sbjct: 78 HHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLI 137
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N L+ MY C +D A VF +P +NVI+WT++I G +A FR M L
Sbjct: 138 LENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAETSLEQAFKVFRLMELEG 196
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
K N VT V+++ AC++ L G +H ++ A + L NAL+ MY RCGR++ A
Sbjct: 197 FKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDAR 256
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+S ERD+ AWN L+T Y + G A ++ M+
Sbjct: 257 AIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLML 294
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 19/291 (6%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
++ L+ CV +AL +G +HS ++ + V LG+A ++M+ + G
Sbjct: 508 LEALDACVGAEAL-------------GKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGS 554
Query: 146 LGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+ A F ++ +W+ +I + + G E L + R G+ TF L
Sbjct: 555 IRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQ-HLRFMQQQGLDMSPATFASTL 613
Query: 205 RTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
C + DL+ GK +H +V RF EA V N+L+TMY KCG L AR VF+ ++D
Sbjct: 614 SACSNLADLREGKRIHSYVRERRFDTEA-ATVTNSLVTMYGKCGSLDCAREVFETSRRQD 672
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WNA+ISGY ++G+ + LF M++ V PD +T ++S G G +
Sbjct: 673 IICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYA 732
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-SWTTMIS 372
++++G +I + G +E E+ + ++ + + T+++S
Sbjct: 733 SMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLS 783
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
V V +L AC ++ AL + +H+ +R + FL N L+ Y +C + AW F
Sbjct: 1 VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++V W ++ A +LA R+M+
Sbjct: 61 MSYKNVYTWTAIIGVCAHHHCHSLAIILLRQML 93
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 296/566 (52%), Gaps = 26/566 (4%)
Query: 22 KTRIP-ETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLE-QA 79
+ R+P + SF K H + + N +S+ +S LN CL+ L QA
Sbjct: 8 RHRVPLQLSFRLCSKFFHALKHDHHQFDFIPHPNAASVN----HSMLN--CLHSRLPFQA 61
Query: 80 LKYLDSMQELNIC--VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
L + +L+ VDE + ++ C+ + ++ +V S +S ++V N+ +
Sbjct: 62 LTAFKNHFQLHSLENVDEVTVALSLKACQGESKLGCQIHGFAVCSGFVSFVTVS--NSLM 119
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G+ G A VF + D+ SWN ++ G+ ++ +AL+ + M + G + D
Sbjct: 120 KMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEES---VDALNFARSMHYCG-IAFDP 175
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T+ L C G G ++H V++ G +V + NAL+TMY + G L AR VFD
Sbjct: 176 VTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDE 235
Query: 258 MPKRDRISWNAMISGYFENGEY--MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
MP+RD +SWNAMISGY + G+ ++ ++LF+ M + D ++L+ +SA + + +
Sbjct: 236 MPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLE 295
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LGR++HG K+G+ VSVCN L+ Y ++ + VF + +++VVSWTTMIS E
Sbjct: 296 LGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDE 355
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ AV + M G P+++T ++ A + G+ +H L +++ +S
Sbjct: 356 -----EDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQT 410
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
++N+ I MY+K +CI ++ ++F ++ + +SW ++I G N EAL+ + + +
Sbjct: 411 VSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKEI 470
Query: 496 KPNSVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
KPN T S+L+A A +L GK H+H L++G+ D + ALLDMY + G + +
Sbjct: 471 KPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIES 530
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERG 578
FN ER AW +++ YA G
Sbjct: 531 QRVFNETLERTQFAWTAIISAYARHG 556
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 236/482 (48%), Gaps = 15/482 (3%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL + SM I D + + C G+ G LHS+V K V +GNA ++
Sbjct: 159 ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVT 218
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFDEALSLYQRMFWVGGVKPD 196
M+ ++G L A VF +M +RDL SWN +I GYA+ G + EA+ L+ M G+ D
Sbjct: 219 MYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVR-HGMLID 277
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ + CG + +L+ G+++H + GY V V N L++ Y KC A+ VF+
Sbjct: 278 HVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFE 337
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ R+ +SW MIS E+ + LF MR V P+ +T +I A +
Sbjct: 338 SISNRNVVSWTTMISIDEEDA-----VSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTE 392
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +HG IK F + +V N I MY F +E K+F + ++ VSW +IS Y
Sbjct: 393 GLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQ 452
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYI 434
+ +A+ TY + + P++ T SVL+A A ++ L G H ++ GL +
Sbjct: 453 NGSYKEALLTY-LSAVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDP 511
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML- 493
I++ L+DMY K I ++ VF++ ++ +WT+II + FE+++ M
Sbjct: 512 IVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHG-DFESVMSLYTEMER 570
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMK 551
+ P+S+T +S+L+AC R G + G + ++ + + ++DM R GR+
Sbjct: 571 EGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLD 630
Query: 552 PA 553
A
Sbjct: 631 EA 632
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 194/409 (47%), Gaps = 25/409 (6%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
LE L +++ M + +D +L V C + + G +H + K V + N
Sbjct: 260 LEAVLLFVN-MVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNV 318
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE--ALSLYQRMFWVGGV 193
+S + K A VF + +R++ SW +I DE A+SL+ M V GV
Sbjct: 319 LMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS-------IDEEDAVSLFNAM-RVNGV 370
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF ++ + G +H I+ + ++ V N+ ITMY K + +
Sbjct: 371 YPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTK 430
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVG 312
+F+ + R+ +SWNA+ISGY +NG Y + L+ ++ ++E+ P+ T SV++A
Sbjct: 431 IFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKEI--KPNQYTFGSVLNAIAAAE 488
Query: 313 DEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D L G+ H +++K+G D V L+ MY G+ E ++VF+ + +WT +
Sbjct: 489 DISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAI 548
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + + Y ME EG PD IT SVL+AC G +D G ++ ++
Sbjct: 549 ISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHS 608
Query: 431 IS-----YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
I Y I ++DM + +D+A E+ HQIP +S +LG
Sbjct: 609 IEPTSEHYSI----MVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLG 653
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 119/215 (55%), Gaps = 10/215 (4%)
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLAM 426
+M++C S LP +A+ ++ S+ DE+T+A LS AC G LG ++H A+
Sbjct: 48 SMLNCLH-SRLPFQALTAFKNHFQLHSLENVDEVTVA--LSLKACQGESKLGCQIHGFAV 104
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+G +S++ ++N+L+ MY K KAL VF + +++SW +++ G S +AL
Sbjct: 105 CSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFE---ESVDALN 161
Query: 487 FFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F R M + + VT S L+ C + G ++H+ ++ G+ + F+ NAL+ MY
Sbjct: 162 FARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYS 221
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
R G + A F+ ERD+ +WN +++GYA+ G+
Sbjct: 222 RWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGK 256
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 252/499 (50%), Gaps = 39/499 (7%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRD-----LFSWNVLIGGYAKAGFFDEALSLYQRMF 188
N ++ V+ G L Y D D LF +N LI GYA AG D+A+ LY +M
Sbjct: 63 NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
V G+ PD YTFP +L C + L G +VH V++ G E D+ V N+LI Y +CG +
Sbjct: 123 -VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKV 181
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
R +FDGM +R+ +SW ++I+GY + + LF M E V+P+ +T+ VISA
Sbjct: 182 DLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISAC 241
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D +LG++V Y+ ++G + N L+ MY+ G+ ++F +K++V +
Sbjct: 242 AKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYN 301
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
T++S Y + M +G PD++T+ S ++ACA LG+L +G H +R
Sbjct: 302 TIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN 361
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL------RLNNRSF 482
GL + I+N +IDMY KC + A +VF +P+K V++W S+I GL L R F
Sbjct: 362 GLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIF 421
Query: 483 -------------------------EALIFFRKMMLNLKP-NSVTLVSILSACARIGALM 516
EA+ FR+M P + VT+V I SAC +GAL
Sbjct: 422 DEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALD 481
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K + + + + D L AL+DM+ RCG A + F E RDVSAW + A
Sbjct: 482 LAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMA 541
Query: 576 ERGQGALAEEFFRKMIDSK 594
G A E F +M++ K
Sbjct: 542 MEGNTEGAIELFNEMLEQK 560
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 260/553 (47%), Gaps = 44/553 (7%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+QA+ M + I D+ L+ C EG+ +H V K + + N+
Sbjct: 112 DQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSL 171
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + + G + +F M +R++ SW LI GY+ EA+SL+ +M GV+P+
Sbjct: 172 IHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQM-GEAGVEPN 230
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T CV+ C + DL+ GK+V ++ G E +VNAL+ MY+KCGD+ AR +FD
Sbjct: 231 PVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFD 290
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
++ + +N ++S Y + L++ M + PD +T+ S I+A +GD +
Sbjct: 291 ECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSV 350
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-------------- 362
G+ H YV++ G ++ N +I MY+ G RE KVF M +K
Sbjct: 351 GKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVR 410
Query: 363 -----------------DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
D+VSW TMI + ++A+E ++ M+ +G D +T+ +
Sbjct: 411 DGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGI 470
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
SAC LG LDL + + + + + L+DM+S+C A+ VF ++ ++V
Sbjct: 471 ASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDV 530
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI--- 521
+WT+ I + + + A+ F +M+ +KP+ V V++L+AC+ G++ G+++
Sbjct: 531 SAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWS 590
Query: 522 --HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAER 577
AH +R + G ++D+ R G ++ A + S E + W LL +
Sbjct: 591 MEKAHGIRPHIVHYG----CMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKH 646
Query: 578 GQGALAEEFFRKM 590
LA K+
Sbjct: 647 KNVELAHYAAEKL 659
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 206/400 (51%), Gaps = 10/400 (2%)
Query: 213 LKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLVR---ARLVF--DGMPKRDRIS 265
LK K++H +++ G +N LI V+ G L AR F D
Sbjct: 38 LKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFM 97
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+N +I GY G + ++L++ M + + PD T ++SA + G +VHG V+
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
KMG D+ V N LI Y G + G K+F M ++VVSWT++I+ Y G L +AV
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M G P+ +T+ V+SACA L +L+LG K+ G+ I+ N L+DMY
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
KC I A ++F + +KN++ + +I+ + + + L+ +M+ +P+ VT++S
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
++ACA++G L GK HA+ LR G+ + NA++DMY++CG+ + A F +
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT 397
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLMG 602
V WN L+ G G LA F +M++ +W ++G
Sbjct: 398 VVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIG 437
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 211/464 (45%), Gaps = 35/464 (7%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A+ M E + + +V ++ C + + G + S +S+ LS + NA
Sbjct: 213 KEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNAL 272
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M++K GD+ A +F + +++L +N ++ Y + + L + M G +PD
Sbjct: 273 VDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQ-KGPRPD 331
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---------- 246
T + C + DL GK H +V+R G E ++ NA+I MY+KCG
Sbjct: 332 KVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFE 391
Query: 247 ---------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
D+ A +FD M +RD +SWN MI + + + + L
Sbjct: 392 HMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIEL 451
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M+ + D +T+ + SA +G L + V Y+ K D+ + L+ M+
Sbjct: 452 FREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSR 511
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ VF RME +DV +WT I + A+E + M + PD++ ++
Sbjct: 512 CGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVAL 571
Query: 406 LSACACLGNLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DK 463
L+AC+ G++D G +L + G+ +I+ ++D+ + +++A+++ +P +
Sbjct: 572 LTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEP 631
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
N + W S++ R +++ E + + + L P V + +LS
Sbjct: 632 NDVVWGSLLAACR-KHKNVELAHYAAEKLTQLAPERVGIHVLLS 674
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L E+A++ MQ I D +V + C + D ++ + + K
Sbjct: 433 NTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEK 492
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H+ ++LG A + MF + GD A +VF +M RD+ +W IG A G + A+ L
Sbjct: 493 NDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIEL 552
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTC--GGVPD--------LKRGKEVHVHVIRFGYEADV- 232
+ M VKPD F +L C GG D +++ + H++ +G D+
Sbjct: 553 FNEML-EQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLL 611
Query: 233 -------DVVNALITMYVKCGDLVRARLV 254
+ V+ + +M ++ D+V L+
Sbjct: 612 GRAGLLEEAVDLIQSMPIEPNDVVWGSLL 640
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 249/465 (53%), Gaps = 11/465 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + M+ K DL A VF ++ DR++ SW +I G + GF + L L+ +M V
Sbjct: 204 NSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQ-DNV 262
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P YT V+ C + L +G+ +H VI+ G ++ + AL+ MYVKCG+L AR
Sbjct: 263 PPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARC 322
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + D + W MI GY +NG + L LF+ R + P+ +T ++V+SAS + D
Sbjct: 323 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRD 382
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+ +HG +K+G + V N L+ MY E +++F R+ +KDVV+W +MIS
Sbjct: 383 LSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISG 442
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + D A+ ++ M +GS PD I++ + LSA CLG+L +G +H A++ +S
Sbjct: 443 YAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSN 502
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + L+++Y+KC + A VF ++ D+N ++W ++I G + S ++ F +M+
Sbjct: 503 IYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLK 562
Query: 494 N-LKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + PN + SILS C+ G + GK + A I + + ++D+ R G
Sbjct: 563 DGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYA--CMVDVLARAGN 620
Query: 550 MKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A +F N + D S W L G + AEE ++M+
Sbjct: 621 LEDAL-EFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMM 664
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 191/359 (53%), Gaps = 8/359 (2%)
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP- 296
L++ Y GDL AR+VFDG P+ D S+ AM+ + + + L MR P
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 297 --DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D LS + A + GR +H IK+G +D V N L+ MY + E K
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADGF-VMNSLVDMYAKAEDLECARK 221
Query: 355 VFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF R+ ++VVSWT+MIS C + D + + M + P E TIA+V++AC+ L
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASD-GLLLFNKMRQDNVPPSEYTIATVITACSALF 280
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G +H ++ GL+S I+ L+DMY KC +D A VF ++ +++ WT++I+
Sbjct: 281 GLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIV 340
Query: 474 GLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N +AL +F K N+ PNSVT ++LSA A++ L GK IH A+++G+
Sbjct: 341 GYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVE 400
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+DMY +C + A F + +DV AWN +++GYAE G A F++M
Sbjct: 401 YNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQM 459
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 207/438 (47%), Gaps = 6/438 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L + M++ N+ E + ++ C G +G ++H V K + +
Sbjct: 244 NGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFI 303
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY-QRMFWVG 191
A L M+VK G+L HA VF ++ DL W +I GY + G +AL L+ + F
Sbjct: 304 SAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRF--A 361
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ P+ T VL + DL GK +H ++ G V NAL+ MY KC + A
Sbjct: 362 NIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEA 421
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F + +D ++WN+MISGY EN LMLF M PD +++ + +SAS +
Sbjct: 422 DRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCL 481
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD +G+ +HGY +K F ++ V L+ +Y G+ +VF M ++ V+W MI
Sbjct: 482 GDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMI 541
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
Y ++ + M +G P++I S+LS C+ G + G + +A +
Sbjct: 542 GGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNI 601
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFR 489
+ ++D+ ++ ++ ALE +P + S W + + G L++R A +
Sbjct: 602 TPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIK 661
Query: 490 KMMLNLKPNSVTLVSILS 507
+MM+ L P L ++S
Sbjct: 662 RMMV-LHPERPDLYVLIS 678
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 260/507 (51%), Gaps = 8/507 (1%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M++ I V + L C + +G H + +T+ + L N+ L M+ K G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A VF +M +R+L SWN +I YA+ G FD+ ++ M + KP+ T+ LR
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELE-TKPNGSTYIGFLR 119
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+ L+ GK++H H IR G ++ V A+ MYVKCG L A LVF+ M +++ ++
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
W ++ GY + M L LF M V+ D S V+ A + + GR++HG+++
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K+G +VSV PL+ Y+ N E K F + + VSW+ +I+ Y ++A++
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALK 299
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
T++ + + T S+ AC+ L + + G + H A+++ L++Y + +I MYS
Sbjct: 300 TFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYS 359
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
+C +D A VF I D + ++WT+II G + EAL FR+M ++PN+VT ++
Sbjct: 360 RCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIA 419
Query: 505 ILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--E 561
+L+AC+ G ++ G++ + + + GVA + ++D+Y R G ++ A S
Sbjct: 420 VLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFS 479
Query: 562 RDVSAWNILLTG---YAERGQGALAEE 585
D +W LL G Y G LA E
Sbjct: 480 PDAMSWKCLLGGCWTYRNLEIGELAAE 506
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 206/408 (50%), Gaps = 10/408 (2%)
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G+ ++ C+ CG + L G+ H + R + N+++ MY KCG L
Sbjct: 4 AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT----LSSVIS 306
AR VFD M +R+ +SWN +IS Y ENG + KG +F M E+ P+ T L S+++
Sbjct: 64 ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
S L ++G+++H + I+ G + SV + MY+ G E E VF +M K+ V+
Sbjct: 124 PSGL----EIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT ++ Y + A+ + M EG DE + VL ACA L L+ G ++H +
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL S + + L+D Y KC ++ A + F I + N +SW+++I G EAL
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALK 299
Query: 487 FFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F + ++ NS T SI AC+ + G + HA A++ + +A++ MY
Sbjct: 300 TFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYS 359
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RCGR+ A F S ++ D AW ++ GYA +G A + FR+M D
Sbjct: 360 RCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD 407
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 210/413 (50%), Gaps = 3/413 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG ++ +M EL + + +R G + G +HS +
Sbjct: 80 NTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIR 139
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + A +M+VK G L A VF KM +++ +W ++ GY +A +AL+L
Sbjct: 140 SGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALAL 199
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M GV+ D Y F VL+ C G+ +L G+++H H+++ G E++V V L+ YV
Sbjct: 200 FAKMV-NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYV 258
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC +L A F+ + + + +SW+A+I+GY + GE+ + L F +R VD + T +S
Sbjct: 259 KCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS 318
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ A + D G + H IK + +I MY G + +VF ++ D
Sbjct: 319 IFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPD 378
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LH 422
V+WT +I+ Y +A++ ++ M+ G P+ +T +VL+AC+ G + G + L
Sbjct: 379 AVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLE 438
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
++ G+ + I + ++D+YS+ + +ALE+ +P + +SW ++ G
Sbjct: 439 SMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 229/425 (53%), Gaps = 8/425 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL----- 213
R F WN L A AG EAL +Y M GV+PD TFP L
Sbjct: 69 RSAFLWNSLSRALASAGLPSEALRVYNCMVR-SGVRPDDRTFPFALHAAAAAVVAEAEHP 127
Query: 214 KRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+G E+H +R G ADV N L+T Y G AR VFD MP RD +SWN+++S
Sbjct: 128 AKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSA 187
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
NG + M + + +L SV+ A DE G VHG V+K G
Sbjct: 188 LLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV 247
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V++ N L+ MY FG+ E +VF+ M+ K+ VSW + + C+ + + +E +++M
Sbjct: 248 VNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSE 307
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
P +T++S+L A LG LG ++H ++R + S I IAN+L+DMY+K C++K
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEK 367
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACAR 511
A +F I +NV+SW ++I L N EA +M N + PNS TLV++L AC+R
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILL 571
+ ++ GK+IHA ++ + D F+ NAL+D+Y +CG++ A + F+ +E+D ++N L+
Sbjct: 428 VASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDVSYNTLI 487
Query: 572 TGYAE 576
GY++
Sbjct: 488 VGYSQ 492
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 250/462 (54%), Gaps = 4/462 (0%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN ++ + G A VF +M RD+ SWN L+ G ++A M G
Sbjct: 150 GNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMR-SG 208
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ +V + V+ CG D G VH V++ G ++ V++ NAL+ MY K GDL +
Sbjct: 209 IPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSM 268
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+GM +++ +SWN+ + + G + L +F +M E V P +TLSS++ A +G
Sbjct: 269 RVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLG 328
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG+EVHGY I+ D+ + N L+ MY FG E+ +F +E ++VVSW MI+
Sbjct: 329 YFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIA 388
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +A M+ G P+ T+ ++L AC+ + ++ +G ++H ++ L+S
Sbjct: 389 NLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMS 448
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N LID+Y+KC + A ++F + +K+ +S+ ++I+G + FE+L F++M
Sbjct: 449 DLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMR 507
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
++ ++V+ + LSACA + A GKEIH +R + FL N+LLD+Y + G +
Sbjct: 508 SAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLA 567
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A FN +DV++WN ++ GY GQ +A E F M D
Sbjct: 568 TASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKD 609
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 257/491 (52%), Gaps = 3/491 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L NG LE A + + M I V+ +LV++V C +R GL +H +V K
Sbjct: 182 NSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLK 241
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V LGNA + M+ KFGDL + VF M +++ SWN +G +A AGF ++ L +
Sbjct: 242 SGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEM 301
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ V P T +L + GKEVH + IR E+D+ + N+L+ MY
Sbjct: 302 F-RVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYA 360
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L +A +F+ + R+ +SWNAMI+ +NG + L I M++ P+ TL +
Sbjct: 361 KFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVN 420
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A V K+G+++H + I D+ V N LI +Y G + +F R E KD
Sbjct: 421 LLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-KD 479
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ T+I Y S +++ +Q M + G D ++ LSACA L G ++H
Sbjct: 480 DVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHG 539
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +R L ++ +AN+L+D+Y+K + A ++F++I K+V SW ++ILG ++ +
Sbjct: 540 VLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDV 599
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F M + + + V+ +++LSAC+ G + GK+ + + + ++D
Sbjct: 600 AFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVD 659
Query: 543 MYVRCGRMKPA 553
+ R G++ +
Sbjct: 660 LLGRAGQLSES 670
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 184/376 (48%), Gaps = 4/376 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ N+ + M+ KFG L A +F + R++ SWN +I A+ G EA SL M
Sbjct: 351 IANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEM-QKN 409
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ +T +L C V +K GK++H I +D+ V NALI +Y KCG L A
Sbjct: 410 GECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVA 469
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ +FD ++D +S+N +I GY ++ + L LF MR ++ D ++ +SA +
Sbjct: 470 QDIFD-RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANL 528
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
K G+E+HG +++ + + N L+ +Y G K+F+R+ KDV SW TMI
Sbjct: 529 SAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMI 588
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y D A E + +M+ +G D ++ +VLSAC+ G +D G K + +
Sbjct: 589 LGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIK 648
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ ++D+ + + +++E+ +P N W +++ R++ E +
Sbjct: 649 PQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHG-DIELARLAAE 707
Query: 491 MMLNLKPNSVTLVSIL 506
+ LKP ++L
Sbjct: 708 HLFELKPEHSGYYTLL 723
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 249/476 (52%), Gaps = 11/476 (2%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
+ L +L+ C + GL LH+ V KT + V + N L+M+ K G A VF +
Sbjct: 4 ETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE 63
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M +++L SW+ +I GY +AG A+ LY +MF V P+ Y F V+ C + +
Sbjct: 64 MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV----PNEYVFASVISACASLSAVTL 119
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+++H ++FGYE+ V N+LI+MY+KC A VF P+ + +S+NA+I+G+ E
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N + +GL F +MR+ + PD V+ + K G E+H +K+ +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N +I MY +E EK F +E KDV+SW T+I+ K + ++ M E +
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299
Query: 396 M-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ PD+ T S L+ACA L ++ G ++H MRT L + + N L++MY+KC CI A
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++F ++ N++SW +II G + A+ F +M + ++P+SVT + +L+AC G
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419
Query: 514 ALMCGK-EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWN 568
+ G+ ++ G+A D + L+DM R GR+ N+ R WN
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRL----NEAEEYMRKFPFWN 471
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 214/414 (51%), Gaps = 8/414 (1%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T +L C L+ G +H V++ G ++DV + N ++ MY KCG AR VFD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ +SW+AMISGY + GE + L+ M V P+ +SVISA + LG+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +K G+ V N LI MY+ + VF+ + VS+ +I+ + +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++ +E +++M +G +PD VL C NL G +LH ++ L S I N
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLK 496
+I MYS+ I +A + F I +K+VISW ++I + + L F+ M N++
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T S L+ACA + ++ GK+IHAH +R + D + NAL++MY +CG + A++
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 557 FNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ++ +WN ++ G+ G G A E F +M S + + +GL C
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC 415
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 17/359 (4%)
Query: 6 CAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQ--NTSSIATKNP 63
CA S L Q +I S F ++ F S + S+ + Q + S+ T P
Sbjct: 111 CASLSAVTLGQ-------KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTP 163
Query: 64 -------NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
N+ + N LE+ L++ M++ + D A + ++ +C G
Sbjct: 164 EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAE 223
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH K + +GN ++M+ + + A F + ++D+ SWN LI +
Sbjct: 224 LHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDD 283
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ L +++ M V+PD +TF L C G+ + GK++H H++R D+ V N
Sbjct: 284 HAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGN 343
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG + A +F M + +SWN +I+G+ +G + + LF M + P
Sbjct: 344 ALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRP 403
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEK 354
D +T +++A G G+ + + G + D+ + LI M G E E+
Sbjct: 404 DSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEE 462
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 237/446 (53%), Gaps = 6/446 (1%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF D F + VLI D A+ LY R+ + + FP VLR C G
Sbjct: 614 VFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV-SEKTQISKFVFPSVLRACAGSR 672
Query: 212 D-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
+ L G++VH +I+ G + D + +L+ MY + G+L A VFDGMP RD ++W+ ++
Sbjct: 673 EHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLV 732
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
S EN E +K L +F M + V+PD +T+ SV+ +G ++ R VHG + + F
Sbjct: 733 SSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 792
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D ++CN L+ MY G+ EK+F ++ K+ VSWT MIS Y +KA+ ++ M
Sbjct: 793 FDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 852
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKC 449
G P+ +T+ S+LS+C G + G +H A+R L +Y ++ L+++Y++C
Sbjct: 853 LKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGR 912
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+ + H + D+N++ W S I EAL FR+M+ +KP+S TL SI+SA
Sbjct: 913 LGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISA 972
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C G + GK+IH H +R V+ D F+ N+++DMY + G + A F+ R + W
Sbjct: 973 CENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTW 1031
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N +L G+++ G A F M S
Sbjct: 1032 NSMLCGFSQNGNSLEAINLFDYMYHS 1057
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 271/515 (52%), Gaps = 11/515 (2%)
Query: 100 NLVRLCEWKRGY-DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+++R C R + G +H + K+ + + L M+ + G+L A VF M
Sbjct: 663 SVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV 722
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RDL +W+ L+ + +AL +++ M GV+PD T V+ C + L+ +
Sbjct: 723 RDLVAWSTLVSSCLENCEVLKALRMFKCMV-DDGVEPDAVTMISVVEGCAELGCLRIARS 781
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH + R ++ D + N+L+TMY KCGDL+ + +F+ + K++ +SW AMIS Y GE
Sbjct: 782 VHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSY-NRGE 840
Query: 279 YM-KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ K L F M + ++P+ +TL S++S+ L G + G+ VHG+ I+ + +
Sbjct: 841 FSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLS 900
Query: 338 P-LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
P L+++Y G + E + + +++V W + IS Y + +A+ ++ M
Sbjct: 901 PALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIK 960
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T+AS++SAC G + LG ++H +RT +S + N++IDMYSK ++ A V
Sbjct: 961 PDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDEFVQNSVIDMYSKSGFVNLACTV 1019
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F QI +++++W S++ G N S EA+ F M + L+ N VT ++++ AC+ IG+L
Sbjct: 1020 FDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSL 1079
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+ +H + G+ D F AL+DMY +CG + A F + + R + +W+ ++ Y
Sbjct: 1080 EKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAY 1138
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G+ A F +M++S K N M + C
Sbjct: 1139 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 1173
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 256/514 (49%), Gaps = 8/514 (1%)
Query: 65 SRLNELCL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S L CL N + +AL+ M + + D ++++V C +H +++
Sbjct: 729 STLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 788
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
M L N+ L+M+ K GDL + +F K+ ++ SW +I Y + F ++AL
Sbjct: 789 KMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 848
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMY 242
+ M G++P++ T +L +CG ++ GK VH IR + + + ++ AL+ +Y
Sbjct: 849 FSEML-KSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELY 907
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+CG L + + R+ + WN+ IS Y G ++ L LF M + PD TL+
Sbjct: 908 AECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLA 967
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S+ISA E G +LG+++HG+VI+ SD+ V N +I MY G VF +++ +
Sbjct: 968 SIISACENTGLVRLGKQIHGHVIRTDVSDEF-VQNSVIDMYSKSGFVNLACTVFDQIKHR 1026
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+V+W +M+ + + +A+ + M +++T +V+ AC+ +G+L+ G +H
Sbjct: 1027 SIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVH 1086
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ G I + LIDMY+KC ++ A VF + +++++SW+S+I ++ R
Sbjct: 1087 HKLIVCG-IKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIG 1145
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A+ F +M+ + KPN V +++LSAC G++ GK GV+ + +
Sbjct: 1146 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFI 1205
Query: 542 DMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
D+ R G +K A+ D S W L+ G
Sbjct: 1206 DLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 1239
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 198/409 (48%), Gaps = 11/409 (2%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNA 135
E+AL+ M + I + L +++ C EG +H + + + L A
Sbjct: 843 EKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPA 902
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF-WVGGVK 194
+ ++ + G LG + + DR++ WN I YA G EAL L+++M W +K
Sbjct: 903 LVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTW--RIK 960
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD +T ++ C ++ GK++H HVIR +D V N++I MY K G + A V
Sbjct: 961 PDSFTLASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSVIDMYSKSGFVNLACTV 1019
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + R ++WN+M+ G+ +NG ++ + LF M ++ + +T +VI A +G
Sbjct: 1020 FDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSL 1079
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ GR VH +I G D+ LI MY G+ E VF M ++ +VSW++MI+ Y
Sbjct: 1080 EKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAY 1138
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
A+ T+ M G+ P+E+ +VLSAC G+++ G L G+
Sbjct: 1139 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNS 1198
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP---DKNVISWTSIILGLRLNNR 480
ID+ S+ + +A ++P D +V W S++ G R++ +
Sbjct: 1199 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNGCRIHQK 1245
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 148/303 (48%), Gaps = 9/303 (2%)
Query: 292 VLVDP--DFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGN 348
++VDP ++ ++ + +L ++H +++ G D LI+ Y G+
Sbjct: 548 LIVDPRTKYLKMTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGS 607
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ VF D + +I C L D A++ Y + +E + + SVL A
Sbjct: 608 PDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRA 667
Query: 409 CA-CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
CA +L +G K+H +++G+ +I +L+ MY + + A +VF +P +++++
Sbjct: 668 CAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 727
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W++++ N +AL F+ M+ + ++P++VT++S++ CA +G L + +H
Sbjct: 728 WSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 787
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R FD L N+LL MY +CG + + F +++ +W +++ Y +G +E+
Sbjct: 788 RKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSY---NRGEFSEK 844
Query: 586 FFR 588
R
Sbjct: 845 ALR 847
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 263/501 (52%), Gaps = 28/501 (5%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V L++ C R Y E +H V KT H + + + ++++ K G++ A VF M
Sbjct: 71 VPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR 130
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R++ +W L+ G+ + A+ ++Q M + G P VYT VL C + LK G +
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSY-PSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H ++I++ + D V +AL ++Y KCG L A F + +++ ISW + +S +NG
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+KGL LF+ M V + P+ TL+S +S + +LG +V+ IK G+ ++ V N
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI---------------SCYEGSVLPDKA 383
L+ +YL G E ++F+RM+ +V+W MI +C+ GS +A
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS----EA 365
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ + + G PD T++SVLS C+ + ++ G ++H ++TG +S +I++ +LI M
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTL 502
YSKC I++A + F ++ + +I+WTS+I G + S +AL F M L ++PN+VT
Sbjct: 426 YSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTF 485
Query: 503 VSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
V +LSAC+ G + EI +I A D + ++DM+VR GR++ A N
Sbjct: 486 VGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY--ECMVDMFVRLGRLEQALNFIKK 543
Query: 560 NERDVSA--WNILLTGYAERG 578
+ S W+ + G G
Sbjct: 544 MNYEPSEFIWSNFIAGCKSHG 564
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 215/401 (53%), Gaps = 13/401 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C + VH HV++ G + V++ L+ +Y KCG++ AR VFD M +R+
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W ++ G+ +N + + +F M P TLS+V+ A + KLG + H
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
Y+IK D SV + L +Y G E+ K FSR+ K+V+SWT+ +S + P K
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+ + M A P+E T+ S LS C + +L+LG +++ L ++ G S + + N+L+
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALIFFRKM 491
+Y K CI +A +F+++ D ++++W ++I G L +R EAL F K+
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKL 372
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L+ +KP+ TL S+LS C+R+ A+ G++IHA ++ G D + +L+ MY +CG +
Sbjct: 373 NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSI 432
Query: 551 KPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F + R + AW ++TG+++ G A F M
Sbjct: 433 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDM 473
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 130/251 (51%), Gaps = 12/251 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ + L+ M ++I +E L + + C + G ++S+ K ++R+
Sbjct: 247 NGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRV 306
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF-----------DEAL 181
N+ L +++K G + A +F +M D + +WN +I G+A+ EAL
Sbjct: 307 RNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEAL 366
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L+ ++ + G+KPD++T VL C + +++G+++H I+ G+ +DV V +LI+M
Sbjct: 367 KLFSKL-NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG + RA F M R I+W +MI+G+ ++G + L +F M V P+ +T
Sbjct: 426 YSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTF 485
Query: 302 SSVISASELVG 312
V+SA G
Sbjct: 486 VGVLSACSHAG 496
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C GS +ALK + + D L +++ +C ++G +H+ KT V
Sbjct: 359 CHRGS--EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 416
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ + +SM+ K G + A F +M R + +W +I G+++ G +AL +++ M +
Sbjct: 417 IVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDM-SL 475
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV+P+ TF VL C + + + ++ + +D ++ M+V+ G L
Sbjct: 476 AGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLE 535
Query: 250 RARLVFDGMP-KRDRISWNAMISGYFENG 277
+A M + W+ I+G +G
Sbjct: 536 QALNFIKKMNYEPSEFIWSNFIAGCKSHG 564
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 267/504 (52%), Gaps = 3/504 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L+ L+R + +G LH V V + +S++V +A V
Sbjct: 1 MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60
Query: 153 FGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F + + ++ N L+ GY + +DEAL L+ ++ +KPD YT+P VL+ CGG+
Sbjct: 61 FDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLR 120
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ +H +++ G D+ V ++L+ MY KC + A +FD MP +D WN +IS
Sbjct: 121 RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVIS 180
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y+++G++ + L F MMR +PD +T+++ IS+ + D GRE+H ++ GF
Sbjct: 181 CYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRM 240
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D V L+ MY G E +VF +M +K VV+W +MI+ Y ++ ++ M
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY 300
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+EG P T+ S L AC+ L G +H +R + I + ++L+D+Y KC ++
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A +F +P +SW +I G + F+AL F +M + ++P+++T S+L+AC+
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACS 420
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++ AL G+EIH + + + + ALLDMY +CG ++ A+ F ERD+ +W
Sbjct: 421 QLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTS 480
Query: 570 LLTGYAERGQGALAEEFFRKMIDS 593
++T Y G+ A E F +M+ S
Sbjct: 481 MITAYGSHGRVYEALELFAEMLQS 504
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 256/494 (51%), Gaps = 17/494 (3%)
Query: 92 CVDEDALV--NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
C+ D+ ++++ C R G +H+ + K + + +G++ + M+ K + A
Sbjct: 101 CLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECA 160
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
+F +M D+D+ WN +I Y ++G F+EAL Y M G +PD T + +C
Sbjct: 161 VKLFDEMPDKDVACWNTVISCYYQSGKFEEALR-YFGMMRRFGFEPDSVTITTAISSCAR 219
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ DL RG+E+H ++ G+ D V AL+ MY KCG L A VF+ MP + ++WN+M
Sbjct: 220 LLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSM 279
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+GY G+ + + LF M V P TL+S + A G+ VHGY+I+
Sbjct: 280 INGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRI 339
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETY 387
D+ + + L+ +Y G E E +F M VSW MIS Y EG + A+ +
Sbjct: 340 QPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLF--DALRLF 397
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M PD IT SVL+AC+ L L+ G ++H L + L + ++ L+DMY+KC
Sbjct: 398 GEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKC 457
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSIL 506
+++A VF +P+++++SWTS+I + R +EAL F +M+ N+KP+ VT ++IL
Sbjct: 458 GAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAIL 517
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSNE 561
SAC+ G + G ++ I V G +P + L+ + R GR+ A+ SN
Sbjct: 518 SACSHAGLVDDG--LYHFNQMINVY--GIIPRIEHYSCLITLLGRAGRLHEAYEILQSNP 573
Query: 562 RDVSAWNILLTGYA 575
+ +L T ++
Sbjct: 574 EISDDFQLLSTLFS 587
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 4/392 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL+Y M+ D + + C D G +H + + + +
Sbjct: 185 SGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFV 244
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G L A VF +M ++ + +WN +I GY G + L++RM+ G
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMY-SEG 303
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + T L C L GK VH ++IR + D+ + ++L+ +Y KCG + A
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAE 363
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELV 311
+F MPK +SWN MISGY G+ L LF M + V+PD +T +SV++A S+L
Sbjct: 364 TIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLA 423
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
EK GRE+H +++ ++ V L+ MY G EE VF + +D+VSWT+MI
Sbjct: 424 ALEK-GREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMI 482
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMRTGL 430
+ Y +A+E + M PD +T ++LSAC+ G +D G+ +Q+ G+
Sbjct: 483 TAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGI 542
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
I I + LI + + + +A E+ P+
Sbjct: 543 IPRIEHYSCLITLLGRAGRLHEAYEILQSNPE 574
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG ++H + + + L ++ + ++ K G + A +F M SWNV+I GY
Sbjct: 326 EGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYV 385
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G +AL L+ M V+PD TF VL C + L++G+E+H ++ +
Sbjct: 386 TEGKLFDALRLFGEM-SKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNE 444
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+ AL+ MY KCG + A VF +P+RD +SW +MI+ Y +G + L LF M +
Sbjct: 445 VVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQS 504
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V PD +T +++SA G D + N +I +Y
Sbjct: 505 NVKPDRVTFLAILSACSHAG---------------LVDDGLYHFNQMINVY--------- 540
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL-SACAC 411
+ R+E ++ +I+ + + E Y+++++ + D+ + S L SAC
Sbjct: 541 -GIIPRIE-----HYSCLITLLGRA---GRLHEAYEILQSNPEISDDFQLLSTLFSACRL 591
Query: 412 LGNLDLGIKLHQ 423
NLDLG+++ +
Sbjct: 592 HKNLDLGVEIAE 603
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 237/432 (54%), Gaps = 6/432 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRM 187
S+ N+FL D +A F + D +S+NV+I G + A AL Y RM
Sbjct: 59 SIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM 118
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
++G +KP+ T+P + C + ++ G+ H VIR G + D V ++LITMY +CG
Sbjct: 119 KFLG-LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK 177
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD + ++D +SWN+MISGY + + + LF M E P+ M+L SV+ A
Sbjct: 178 MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGA 237
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+GD KLG V +V++ + + + + LI MY G+ ++F M+ KD V+W
Sbjct: 238 CGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 297
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI+ Y + + ++A++ +Q M + PD+IT+ +LSACA +G LDLG ++ A
Sbjct: 298 NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 357
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + + L+DMY+KC +D A VF+ +P+KN +SW ++I L + ++ EAL
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALAL 417
Query: 488 FRKMML---NLKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDM 543
F+ MM + PN +T V +LSAC G + G+ + H + G+ + ++D+
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 544 YVRCGRMKPAWN 555
+ R G ++ AW+
Sbjct: 478 FSRAGHLEEAWD 489
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 210/395 (53%), Gaps = 13/395 (3%)
Query: 117 LHSVVSKTMSHLSV---------RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
L +V + M H SV + ++ ++M+ + G +G A VF ++ +DL SWN +
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GY+K EA+ L++ M G +P+ + VL CG + DLK G V V+
Sbjct: 200 ISGYSKMRHAGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENK 258
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ + +ALI MY KCGDLV AR +FD M K+D+++WNAMI+GY +NG + + LF
Sbjct: 259 MTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQ 318
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
MR PD +TL ++SA +G LG++V Y + GF DDV V L+ MY G
Sbjct: 319 DMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCG 378
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM--PDEITIASV 405
+ + +VF M +K+ VSW MIS +A+ ++ M EG P++IT V
Sbjct: 379 SLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGV 438
Query: 406 LSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
LSAC G +D G +L H ++ GL+ I + ++D++S+ +++A + +P+K
Sbjct: 439 LSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKP 498
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+LG ++ + K++L L+P++
Sbjct: 499 DEVILGALLGACQKRKNIDISERVMKLLLELEPSN 533
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 197/401 (49%), Gaps = 14/401 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
F +L+ C + LK ++H ++ + N+ + D A + F +
Sbjct: 35 FNSLLQQCLSIKQLK---QIHAQLL----TNSIHKPNSFLYKIADLKDFAYASVFFSNIL 87
Query: 260 KRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSV-ISASELVGDEKLG 317
S+N MI G + L + M+ + + P+ +T + I+ S L+ E G
Sbjct: 88 DPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVEN-G 146
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R H VI+ G +D V + LI MY G + KVF + KD+VSW +MIS Y
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+AV ++ M G P+E+++ SVL AC LG+L LG + + + + +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
+ LI MY KC + A +F + K+ ++W ++I G N S EA+ F+ M M +
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ +TL+ ILSACA IGAL GK++ +A G D ++ AL+DMY +CG + A+
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F N+ +VS WN +++ A GQ A F+ M++ G
Sbjct: 387 FYGMPNKNEVS-WNAMISALAFHGQAQEALALFKSMMNEGG 426
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 38/353 (10%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M E +E +LV+++ C G ++ V + L+ +G+A +
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K GDL A +F M +D +WN +I GYA+ G +EA+ L+Q M + PD
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM-RMSSTAPDQ 329
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T +L C + L GK+V ++ G++ DV V AL+ MY KCG L A VF G
Sbjct: 330 ITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYG 389
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLF-IMMRE-VLVDPDFMTLSSVISASELVGDEK 315
MP ++ +SWNAMIS +G+ + L LF MM E V P+ +T V+SA G
Sbjct: 390 MPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449
Query: 316 LGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
GR + H G + + ++ ++ G+ EE +W +++
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE--------------AWDFVMT-- 493
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+P+K PDE+ + ++L AC N+D+ ++ +L +
Sbjct: 494 ----MPEK--------------PDEVILGALLGACQKRKNIDISERVMKLLLE 528
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG E+A+K M+ + D+ L+ ++ C D G + S+
Sbjct: 298 NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 357
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G A + M+ K G L +A+ VF M +++ SWN +I A G EAL+L
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALAL 417
Query: 184 YQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITM 241
++ M GG V P+ TF VL C + G+ + H+ FG ++ + ++ +
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 242 YVKCGDLVRARLVFDGMPKR 261
+ + G L A MP++
Sbjct: 478 FSRAGHLEEAWDFVMTMPEK 497
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 262/485 (54%), Gaps = 8/485 (1%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN 100
SK + QV N+ +I N + L NG ++ +++ M+ DE +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWN--AMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTS 415
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+ C D G LH+V+ K ++ + NA + M+ K G L A F M D
Sbjct: 416 IFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHD 475
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN +I GY + + DEA +++RM GV PD + ++ C V + K+G++ H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVKEFKQGQQCH 534
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ G + ++LI MYVKCG ++ AR VF MP R+ +S NA+I+GY +
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-HLE 593
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPL 339
+ + LF ++ V + P +T + ++ + LGR++HG V+K GF S VC L
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSL 653
Query: 340 IKMYLSFGNREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
+ MY++ + E +FS ++ K +V WT +IS Y +KA++ YQ M ++ +PD
Sbjct: 654 LCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPD 713
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ T ASVL ACA + +L G ++H L TG I ++LIDMY+KC + +L+VFH
Sbjct: 714 QATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFH 773
Query: 459 QIPDKN-VISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
++P +N VISW S+I+GL N + EAL F++M ++ P+ VT + +LSAC+ G +
Sbjct: 774 EMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVS 833
Query: 517 CGKEI 521
G+++
Sbjct: 834 EGRKV 838
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 240/479 (50%), Gaps = 38/479 (7%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS K L LGN + ++VK G++ A F ++ +D+F+WN ++ Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F + + M W GV+P+ +TF VL C G+ D+ GK+VH V + G+
Sbjct: 123 FATVVQSFVCM-WNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQG 181
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI MY KC +L ARLVFDG D +SW +I+GY +G M+ + +F M+ V P
Sbjct: 182 GLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP 241
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D + L +VI+A Y++ G + K+F
Sbjct: 242 DQIALVTVINA-----------------------------------YVALGRLADARKLF 266
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+++ + +VV+W MIS + ++A+ + ++ G ++ SVLSA A L L+
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLN 326
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H A++ GL + + + L++MY+KC +D A +VF+ + ++N++ W +++ G
Sbjct: 327 YGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N + E + FF M + +P+ T SI SACA + L G ++H ++ + F
Sbjct: 387 QNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLF 446
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ NAL+DMY + G +K A QF + D +WN ++ GY + A FR+M+ +
Sbjct: 447 VANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 265/522 (50%), Gaps = 7/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+A+ + +++ + +L +++ + G +H+ K +V +G
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVG 347
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A ++M+ K + A VF + +R++ WN ++GG+A+ G E + + M G
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYM-KRHGP 406
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD +TF + C + L G ++H +I+ + +++ V NAL+ MY K G L AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARK 466
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ M D +SWNA+I GY + + +F M V PD ++L+S++SA V +
Sbjct: 467 QFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKE 526
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G++ H ++K+G + LI MY+ G VF M ++VVS +I+
Sbjct: 527 FKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAG 586
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y S L ++A+ +Q ++ G P E+T A +L C L+LG ++H M+ G +S
Sbjct: 587 YTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645
Query: 434 I-IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++ +L+ MY + + +F ++ K ++ WT++I G N +AL F++ M
Sbjct: 646 SEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
N+ P+ T S+L ACA + +L G+E+H+ G D ++L+DMY +CG +
Sbjct: 706 RSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDV 765
Query: 551 KPAWNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKM 590
K + F+ R V +WN ++ G A+ G A E F++M
Sbjct: 766 KGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQM 807
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 244/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +V G L A +F ++ + ++ +WNV+I G+AK GF +EA+S + + G +K
Sbjct: 250 INAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG-LKAT 308
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ VL + L G VH I+ G + +V V +AL+ MY KC + A+ VF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ + WNAM+ G+ +NG + + F M+ PD T +S+ SA +
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDF 428
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++H +IK F+ ++ V N L+ MY G +E K F M+ D VSW +I Y
Sbjct: 429 GGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQ 488
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+A ++ M + G +PDE+++AS++SACA + G + H L ++ GL +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCA 548
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNL 495
++LIDMY KC + A +VF+ +P +NV+S ++I G +++ EA+ F+++ M+ L
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE-EAIHLFQEIQMVGL 607
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAW 554
KP VT +L C L G++IH ++ G ++ + +LL MY+ R +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSE 667
Query: 555 NQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + + + W L++GYA++ A +F++ M
Sbjct: 668 TLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 218/442 (49%), Gaps = 38/442 (8%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ K +L A VF + D SW LI GY + GF EA+ ++ +M VG V
Sbjct: 182 GLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP 241
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
+ A V V+NA YV G L AR +
Sbjct: 242 DQI--------------------------------ALVTVINA----YVALGRLADARKL 265
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F +P + ++WN MISG+ + G + + F+ +++ + +L SV+SA +
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G VH IK G D+V V + L+ MY + ++VF+ + +++V W M+ +
Sbjct: 326 NYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ L + +E + M+ G PDE T S+ SACA L LD G +LH + ++ S +
Sbjct: 386 AQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNL 445
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+AN L+DMY+K + +A + F + + +SW +II+G + EA FR+M+ N
Sbjct: 446 FVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ P+ V+L SI+SACA + G++ H +++G+ ++L+DMYV+CG + A
Sbjct: 506 GVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAA 565
Query: 554 WNQFNSNE-RDVSAWNILLTGY 574
+ F S R+V + N L+ GY
Sbjct: 566 RDVFYSMPYRNVVSINALIAGY 587
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 185/380 (48%), Gaps = 37/380 (9%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L K +H ++ G + N ++ +YVKCG++ A+ F + K+D +WN+++S
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y ++G + + F+ M V P+ T + V+SA + D G++VH V KMGF
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
LI MY N + VF + D VSWTT+I+ Y P +AV+ + M+
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQR 236
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G +PD+I + +V++A LG L
Sbjct: 237 VGHVPDQIALVTVINAYVALGRL-----------------------------------AD 261
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACAR 511
A ++F QIP+ NV++W +I G + EA+ FF ++ LK +L S+LSA A
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ L G +HA A++ G+ + ++ +AL++MY +C +M A FNS ER++ WN +
Sbjct: 322 LSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381
Query: 571 LTGYAERGQGALAEEFFRKM 590
L G+A+ G EFF M
Sbjct: 382 LGGFAQNGLAQEVMEFFSYM 401
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L L +H +++ G+ ++ N ++D+Y KC +D A + F ++ K+V +W
Sbjct: 52 AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
S +L + L++ F ++ M N ++PN T +LSAC+ + + GK++H +
Sbjct: 112 S-VLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFK 170
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEF 586
+G F F L+DMY +C ++ A F+ D +W L+ GY G A +
Sbjct: 171 MGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKV 230
Query: 587 FRKM 590
F KM
Sbjct: 231 FDKM 234
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 495 LKPNSVTLVSILSACARIGA--------------LMCGKEIHAHALRIGVAFDGFLPNAL 540
L P+S L L C RI A L K IH+ +L+IGV G L N +
Sbjct: 23 LSPHSEFLQICLQHCRRIQAHNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVI 82
Query: 541 LDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
+D+YV+CG + A F+ E +DV AWN +L+ Y + G
Sbjct: 83 VDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHG 121
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 276/548 (50%), Gaps = 8/548 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNGSL +A++ MQ+ + + LV + C D G LH+ K
Sbjct: 210 NAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALK 269
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L A +S++ DL + +F +DL S+N +I Y + G + E+ +
Sbjct: 270 CGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDV 329
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M G+ P++ T VL TC + G VH VI+FG + VV+AL++MY
Sbjct: 330 FRQMH-CAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYS 388
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G+L A+ +FD +++ + WN++ISGY N E+ L F M+ V PD T+
Sbjct: 389 KLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIK 448
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
VI + D ++ + +H Y ++ F + SV N L+ MY G K+F +ME +
Sbjct: 449 VIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRM 508
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW T+IS Y + +V+ + M EG D +T+ ++S+ + + +G LH
Sbjct: 509 LISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHS 568
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA+++G I + NTLI MYS C ++ +F + +N +S+ ++ G R NN S E
Sbjct: 569 LAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEE 628
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L FR+M+ N +PN +T++++L C GK +H +A+R + + +
Sbjct: 629 ILPLFRQMVKNEQEPNHITVLNLLPVCQNHQQ---GKSVHCYAIRNFSTLETSFFTSAIC 685
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRK 599
MY R + + FNS ER++ WN +L+ + A +FFR+M ++ K +
Sbjct: 686 MYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVT 745
Query: 600 LMGLFRKC 607
+M L C
Sbjct: 746 MMSLVSAC 753
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 237/459 (51%), Gaps = 8/459 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDR--DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + ++ FG A VF R ++S N+ + ++ GF E L LY+ + G
Sbjct: 79 AVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTLCTFGS 138
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
D +TFP V++ C V L G+E+H V+R G+E +V V AL+ MY K G + +R
Sbjct: 139 ---DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASR 195
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M ++D ISWNAMISGY NG + + M++ + + TL + A G
Sbjct: 196 TVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAG 255
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G +H + +K G D S+ LI +Y + + +F KD+VS+ +MIS
Sbjct: 256 DSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMIS 315
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y ++ + ++ M G P+ +T+ SVL C+ ++LG +H + ++ GL
Sbjct: 316 AYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAE 375
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + + L+ MYSK +D A +F +KN + W SII G +NN AL F KM
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQ 435
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ N+ P++ T++ ++ C I L K IHA+A+R + + NALL MY CG +
Sbjct: 436 IENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELS 495
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAE-RGQGALAEEFFR 588
++ F E R + +WN +++GYAE R A + FF+
Sbjct: 496 SSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQ 534
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 273/532 (51%), Gaps = 6/532 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +G +++ M + + +++++ C G + G +H +V K
Sbjct: 311 NSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIK 370
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A +SM+ K G+L A ++F +++ WN +I GY ++ AL
Sbjct: 371 FGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDT 430
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + V PD T V+ C + DL+ K +H + +R +E + V+NAL+ MY
Sbjct: 431 FCKM-QIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYG 489
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG+L + +F M R ISWN +ISGY E + + LF MR+ + D +TL
Sbjct: 490 DCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIG 549
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+IS+ + D +G +H +K G + D+S+ N LI MY + G+ E +++F + S++
Sbjct: 550 LISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRN 609
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VS+ +++ Y + L ++ + ++ M P+ IT+ ++L C N G +H
Sbjct: 610 TVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQ---NHQQGKSVHC 666
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A+R + I MYS+ +D + ++F+ + ++N+I W +I+ +
Sbjct: 667 YAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADT 726
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A FFR+M LN+KP+ VT++S++SACA++G G+ + A L+ G + NAL+D
Sbjct: 727 AFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALID 786
Query: 543 MYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
M+ RCG + A F+S+ +D W+ ++ Y+ G A F MIDS
Sbjct: 787 MHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDS 838
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 252/513 (49%), Gaps = 7/513 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G +H V +T +V + A L M+ K G +G + VF M +D
Sbjct: 146 VIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKD 205
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN +I GY+ G EA+ Q M G++ + T C+ CG D G +H
Sbjct: 206 LISWNAMISGYSLNGSLREAVEATQEM-QQDGMRANASTLVCIAGACGAAGDSDAGGSLH 264
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G D + ALI++Y DL +R++FD +D +S+N+MIS Y ++G++
Sbjct: 265 AFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWK 324
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ +F M + P+ +T+ SV+ LG VHG VIK G ++ +SV + L+
Sbjct: 325 ESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALV 384
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G + + +F K+ + W ++IS Y + + A++T+ M+ E PD
Sbjct: 385 SMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDAT 444
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ V+ C + +L + +H A+R + N L+ MY C + + ++F ++
Sbjct: 445 TVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKM 504
Query: 461 PDKNVISWTSIILGLRLNNRSFEALI--FFRKMMLNLKPNSVTLVSILSACARIGALMCG 518
+ +ISW +II G R EA + FF+ L+ + VTL+ ++S+ + G
Sbjct: 505 EVRMLISWNTIISGYA-EIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVG 563
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAER 577
+ +H+ A++ G D L N L+ MY CG ++ F N + R+ ++N+L+TGY +
Sbjct: 564 ESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKN 623
Query: 578 GQGALAEEFFRKMI--DSKGNWRKLMGLFRKCQ 608
FR+M+ + + N ++ L CQ
Sbjct: 624 NLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQ 656
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 268/553 (48%), Gaps = 25/553 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +N AL MQ N+ D ++ ++ C + +H+ +
Sbjct: 412 NSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVR 471
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L+ + NA L+M+ G+L ++ +F KM R L SWN +I GYA+ + ++ L
Sbjct: 472 NRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKL 531
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M G++ DV T ++ + D G+ +H ++ G D+ + N LITMY
Sbjct: 532 FFQMRQ-EGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYS 590
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG + + +FD + R+ +S+N +++GY +N + L LF M + +P+ +T+ +
Sbjct: 591 NCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLN 650
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + + G+ VH Y I+ + + S I MY F N + K+F+ + ++
Sbjct: 651 LLPVCQ---NHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERN 707
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++ W ++S L D A + ++ M PDE+T+ S++SACA LGN DLG +
Sbjct: 708 IIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTA 767
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L ++ G +++ N LIDM+S+C + A E+F K+ ++W+++I ++
Sbjct: 768 LILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCES 827
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD-GFLPN--- 538
AL F M+ +KP+ +T V ILSAC+ G + A AL + D G P
Sbjct: 828 ALAIFSMMIDSGVKPDDITFVIILSACSHSGFVE-----QARALFKSLQIDHGITPRMEH 882
Query: 539 --ALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++D+ R G + A++ F +E S LL G + E +I
Sbjct: 883 YACMVDLLGRSGHLDEAYDVVRSMSFRPSE---SLLESLLGACRFHGNSKIGEAVGNLLI 939
Query: 592 DSK-GNWRKLMGL 603
DS+ GN R + L
Sbjct: 940 DSQHGNPRSYVML 952
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESK--DVVSWTTMISCYEGSVLPDKAVETYQM 389
D SV ++ YLSFG VF+ + V S + C+ + ++ Y+
Sbjct: 73 DTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRT 132
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
+ GS D T V+ ACA + L LG ++H +RTG + + L+DMY+K
Sbjct: 133 LCTFGS--DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGW 190
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
I + VF + K++ISW ++I G LN EA+ ++M + ++ N+ TLV I A
Sbjct: 191 IGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGA 250
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
C G G +HA AL+ GV D L AL+ +Y + + F+ + +D+ ++
Sbjct: 251 CGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSY 310
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
N +++ Y + G+ + + FR+M
Sbjct: 311 NSMISAYMQHGKWKESFDVFRQM 333
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 154/344 (44%), Gaps = 40/344 (11%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
++NL+ +C+ + +G +H + S L + + M+ +F ++ ++ +F +
Sbjct: 648 VLNLLPVCQ---NHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVG 704
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+R++ WN ++ + D A +++M ++ +KPD T ++ C + + G+
Sbjct: 705 ERNIIVWNAILSACVQCKLADTAFDFFRQMHFLN-MKPDEVTMMSLVSACAQLGNSDLGE 763
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
V +++ G+ + VVNALI M+ +CG L AR +FD +D ++W+AMI+ Y +G
Sbjct: 764 CVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHG 823
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L +F MM + V PD +T ++SA G + R +
Sbjct: 824 DCESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARAL----------------- 866
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
F + + + RME + M+ S D E Y ++ + P
Sbjct: 867 --------FKSLQIDHGITPRME-----HYACMVDLLGRSGHLD---EAYDVVRSMSFRP 910
Query: 398 DEITIASVLSACACLGNLDLGIKLHQL---AMRTGLISYIIIAN 438
E + S+L AC GN +G + L + SY++++N
Sbjct: 911 SESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSN 954
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 266/524 (50%), Gaps = 21/524 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + +A Y M + + + ++ C R D L +VV ++ +
Sbjct: 205 NGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSAR--DAELVYGNVVEAEWESDTM-V 261
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++MF K G L A VF +M D+ SWN ++ A+ GF EAL L++RM
Sbjct: 262 ANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRM--PSE 319
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V D T L TC L+ GK +H V R G E DV AL+TMY +CGDL AR
Sbjct: 320 VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEAR 379
Query: 253 LVFDGMPKRDRISWNAMISGYFENGE-YMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFDG+ ++ +SWN MI+ Y + + + L +F +M V P T +V+SA E
Sbjct: 380 RVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVEC- 438
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ +G+++HG+++ G D + + L+ MY G+ + +VF ++ +DV +W ++
Sbjct: 439 --QSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIV 496
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA----CLGNLDLGIKLHQLAMR 427
G P +A+E + M EG+ + T LSA + C G +LH L
Sbjct: 497 GVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVCYGR-----RLHGLIAE 551
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+GL + +AN LI MY++CK ++ A F ++ DK+++SWTS+I EA+
Sbjct: 552 SGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDL 611
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
F++M L+P+ VT ++L AC + A GK +H+ A +G+ + F+ AL+ M+ +
Sbjct: 612 FQRM--ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKF 669
Query: 548 GRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
G + A F + E ++ WN +L GYA+ G +FF M
Sbjct: 670 GNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAM 713
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 246/501 (49%), Gaps = 14/501 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + LV LC ++ E ++S + L G + + MF+K + A VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M DR + W ++ + D A + RM + GV PD TF +L C L
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRM-QLEGVLPDRVTFISILNAC---ESL 142
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+G+ VH +I E+DV + NAL+ M KC DL A F MP+RD ISW M++ Y
Sbjct: 143 AQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAY 202
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
NG + ++ M V P+ +T +V++A D +L V+G V++ + D
Sbjct: 203 ARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAEL---VYGNVVEAEWESDT 259
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N I M+ G + VF RM+ DV SW M++ +A+E ++ M +E
Sbjct: 260 MVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE 319
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
++ D+ T+ LS CA +L+ G +H R GL + ++ L+ MYS+C + +A
Sbjct: 320 VAV-DKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEA 378
Query: 454 LEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
VF I KNV+SW ++I R + AL FR M+L+ ++P T ++++SA
Sbjct: 379 RRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSA--- 435
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ GK++H + G+ D F+ +AL++MY R G + A F ERDV AWN +
Sbjct: 436 VECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAI 495
Query: 571 LTGYAERGQGALAEEFFRKMI 591
+ GQ A E+F +M+
Sbjct: 496 VGVCVGHGQPREALEWFSRML 516
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 257/520 (49%), Gaps = 19/520 (3%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+++A + MQ + D ++++ CE +G +H ++ V +GNA
Sbjct: 110 VDRAWLFFFRMQLEGVLPDRVTFISILNACE---SLAQGELVHRLIIDKNLESDVVIGNA 166
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M K DL A F +M RD+ SW ++ YA+ G EA Y RM + GV P
Sbjct: 167 LMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRML-LEGVVP 225
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ TF VL C D + V+ +V+ +E+D V NA I M+ KCG L RAR VF
Sbjct: 226 NNITFLAVLAACSSARD---AELVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVF 282
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM-REVLVDPDFMTLS-SVISASELVGD 313
M + D SWNAM++ ++G + L LF M EV VD + ++ S +A E + D
Sbjct: 283 HRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLED 342
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H V ++G DV L+ MY G+ E +VF + K+VVSW MI+
Sbjct: 343 ---GKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA 399
Query: 374 Y-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L +A+E +++M +G P T +V+SA C +G +LH + TGL S
Sbjct: 400 YGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVEC---QSVGKQLHGWIVDTGLYS 456
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + L++MY + + A VF +I +++V +W +I+ + + EAL +F +M+
Sbjct: 457 DSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRML 516
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L N T + LSA + + G+ +H G+ D + NAL+ MY RC ++
Sbjct: 517 LEGASGNRATFLLALSAVSP-DRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLE 575
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A N F+ E + + +W ++ + G A + F++M
Sbjct: 576 DARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM 615
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 206/414 (49%), Gaps = 9/414 (2%)
Query: 181 LSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L L+QR F V D F ++ C L V+ + G D +++
Sbjct: 11 LQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVV 70
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
M++KC + A VF+ M R + W +M++ + ++ + + + F M+ V PD +
Sbjct: 71 RMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRV 130
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T S+++A E + +L VH +I DV + N L+KM + + + F RM
Sbjct: 131 TFISILNACESLAQGEL---VHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRM 187
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DV+SWT M++ Y + +A Y M EG +P+ IT +VL+AC+ + +L
Sbjct: 188 PRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAEL-- 245
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++ + S ++AN I+M+SKC C+D+A +VFH++ +V SW +++ L +
Sbjct: 246 -VYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHG 304
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S EAL FR+M + + TLV LS CA +L GK IH+ R+G+ D A
Sbjct: 305 FSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTA 364
Query: 540 LLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA-ERGQGALAEEFFRKMI 591
L+ MY RCG + A F+ ++V +WN ++ Y + + A E FR M+
Sbjct: 365 LVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLML 418
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 9/368 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH + T + +G+A ++M+ + G LG A VF K+ +RD+F+WN ++G
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADV 232
G EAL + RM + G + TF L PD + G+ +H + G EAD
Sbjct: 502 HGQPREALEWFSRML-LEGASGNRATFLLALSAVS--PDRVCYGRRLHGLIAESGLEADN 558
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+V NALI+MY +C L AR FD + + +SW ++I+ + G + + LF M
Sbjct: 559 NVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME-- 616
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
++PD +T ++V+ A +V + G+ VH ++G +V V LI M+ FGN E
Sbjct: 617 -LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEA 675
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F +E+ + W M+ Y + ++ + M+ G PD IT +V+SAC+
Sbjct: 676 RRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHA 735
Query: 413 GNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTS 470
G ++ G + + G+ + LID+ ++ +++A + +P + ++W +
Sbjct: 736 GLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKT 795
Query: 471 IILGLRLN 478
++ ++
Sbjct: 796 LLAACKIQ 803
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 261/520 (50%), Gaps = 3/520 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G AL + M + D+ +V+ C + G +H V+ V +G
Sbjct: 37 GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + ++ + G L A Y+F + +D WNV++ GY K G A+ ++ M +
Sbjct: 97 SSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRH-SEI 155
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ TF CVL C L G ++H + G E D V N L+ MY KC L AR
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARK 215
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD +P+ D +SWN +ISGY +NG + LF M + PD +T +S + +
Sbjct: 216 LFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLS 275
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K +E+HGY+I+ DV + + LI +Y + E +K + S D V TTMIS
Sbjct: 276 LKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISG 335
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +A+E ++ + E P +T +S+ A A L L+LG +LH ++T L
Sbjct: 336 YVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEK 395
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + ++DMY+KC +D A VF++I +K+ I W S+I N R EA+ FR+M M
Sbjct: 396 CHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGM 455
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ + V++ LSACA + AL GKEIH ++ + D + ++L+DMY +CG +
Sbjct: 456 EGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNF 515
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ F+ E++ +WN +++ Y G F +M+
Sbjct: 516 SRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEML 555
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 258/559 (46%), Gaps = 22/559 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN NG A+K M+ I + ++ +C + D G LH +
Sbjct: 128 NVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVG 187
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + N L+M+ K L A +F + DL SWN +I GY + G EA L
Sbjct: 188 CGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHL 247
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G+KPD TF L + LK KE+H ++IR DV + +ALI +Y
Sbjct: 248 FRGMI-SAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D+ A+ D + MISGY NG+ + L F + + + P +T SS
Sbjct: 307 KCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ A + LG+E+HG +IK + V + ++ MY G + +VF+R+ KD
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKD 426
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ W +MI+ + P +A+ ++ M EG+ D ++I+ LSACA L L G ++H
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L ++ L S + ++LIDMY+KC ++ + VF ++ +KN +SW SII + E
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKE 546
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALL 541
L F +M+ N ++P+ VT + I+SAC G + G + H G+ +
Sbjct: 547 CLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVA 606
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID------- 592
DM+ R GR+ A+ NS D W LL G LAE + + D
Sbjct: 607 DMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSG 666
Query: 593 ----------SKGNWRKLM 601
G WRK++
Sbjct: 667 YYVLLANVQAGAGKWRKVL 685
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 184/356 (51%), Gaps = 2/356 (0%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MYV+ G L A+ +F + +WN MI G+ G++ L+ ++ M V PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
V+ A + K+G+ VH V MG +DV V + LIK+Y G+ + + +F +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD V W M++ Y + A++ + M P+ +T A VLS CA LDLG +
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH +A+ GL +ANTL+ MYSKC+C+ A ++F +P +++SW II G N
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EA FR M+ +KP+S+T S L + +L KEIH + +R V D FL +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 540 LLDMYVRCGRMKPAW-NQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
L+D+Y +C ++ A N S+ D +++GY G+ A E FR ++ +
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 260/498 (52%), Gaps = 5/498 (1%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+ V+L+ C ++ +G +H+ + +T S SV L N+ ++++ K G + A VF +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 157 CDRDLFSWNVLIGGYAKAGF--FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
++D+ SWN LI GY++ G + + L+QRM P+ +TF V P+
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRM-RAENTLPNGHTFSGVFTAASSSPETF 130
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G + H I+ DV V ++LI MY K G ++ AR VFD +P+R+ +SW +ISGY
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ LF +MR D +SV+SA + G+++H +K G S
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L+ MY G ++ K F KD ++W+ MI+ Y + +A+ + M G
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ P E T V++AC+ +G L+ G ++H +++ G I L+DMY+KC + A
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
+ F + + +++ WTS+I G N + AL + +M M + P+ +T+ S+L AC+ +
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
AL GK+IHA ++ G + + + +AL MY +CG ++ F RD+ WN +++
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490
Query: 573 GYAERGQGALAEEFFRKM 590
G ++ G+G A E F ++
Sbjct: 491 GLSQNGEGLKALELFEEL 508
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 216/402 (53%), Gaps = 4/402 (0%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P +F +L C DL++GK +H ++R G + V + N+L+ +Y KCG +V+A+
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 253 LVFDGMPKRDRISWNAMISGYFENGE--YMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
LVF+ + +D +SWN +I+GY + G Y + LF MR P+ T S V +A+
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G + H IK DV V + LI MY G + KVF + ++ VSW T+
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + +A E + +M E D+ SVLSA + G ++H LA++ GL
Sbjct: 186 ISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL 245
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+S + N L+ MY KC C+D AL+ F DK+ I+W+++I G S EAL F
Sbjct: 246 LSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYN 305
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M LN KP+ T V +++AC+ IGAL GK+IH ++L+ G + AL+DMY +CG
Sbjct: 306 MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGS 365
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+ E D+ W +++GYA+ G+ A + +M
Sbjct: 366 LVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRM 407
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 239/467 (51%), Gaps = 15/467 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL H++ KT + V +G++ ++M+ K G + A VF + +R+ SW +I GYA
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADV 232
EA L+ M G D + + VL VPDL GK++H ++ G +
Sbjct: 192 ERMAFEAWELFXLMRREEGAH-DKFIYTSVLSALT-VPDLVHYGKQIHCLALKNGLLSIA 249
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+TMY KCG L A F+ +D I+W+AMI+GY + G+ + L LF M
Sbjct: 250 SVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P T VI+A +G + G+++HGY +K G+ + L+ MY G+ +
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ D+V WT+MIS Y + + A+ Y M+ E MP E+T+ASVL AC+ L
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+ G ++H ++ G + I + L MY+KC ++ VF ++P +++++W ++I
Sbjct: 430 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 489
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
GL N +AL F ++ KP+ VT V++LSAC+ +G + GK R+ +
Sbjct: 490 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVY----FRMMLD 545
Query: 532 FDGFLPNA-----LLDMYVRCGRMKPAWNQFNSNERD--VSAWNILL 571
G +P ++D+ R G++ S D + W ILL
Sbjct: 546 EFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 592
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 1/224 (0%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
E V ++ C +EG +H K + A + M+ K G L A F
Sbjct: 315 EFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFD 374
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ + D+ W +I GYA+ G + AL+LY RM + + P T VLR C + L+
Sbjct: 375 YLKEPDIVLWTSMISGYAQNGENETALTLYCRM-QMERIMPHELTMASVLRACSSLAALE 433
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+GK++H I++G+ +V + +AL TMY KCG L LVF MP RD ++WNAMISG
Sbjct: 434 QGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLS 493
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+NGE +K L LF +R PD++T +V+SA +G + G+
Sbjct: 494 QNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P + +L C +L G +H +RTG S + + N+L+++Y+KC I KA V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 457 FHQIPDKNVISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILSACARIG 513
F I +K+V+SW +I G SF +F R N PN T + +A +
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
G + HA A++ +D F+ ++L++MY + G M A F++ ER+ +W +++
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 573 GYAERGQGALAEEFFRKMIDSKGNWRKLM 601
GYA A E F M +G K +
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFI 216
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E AL MQ I E + +++R C ++G +H+ K L V +
Sbjct: 394 NGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPI 453
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A +M+ K G L VF +M RD+ +WN +I G ++ G +AL L++ + G
Sbjct: 454 GSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH-GT 512
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGK 217
KPD TF VL C + ++RGK
Sbjct: 513 TKPDYVTFVNVLSACSHMGLVERGK 537
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 261/482 (54%), Gaps = 6/482 (1%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H + K+ + S+ N +S + K G++ A +FG+ RD SWN +I G+ G F
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+ AL + M G D Y+F +L+ V ++ G++VH +++ GYE +V +A
Sbjct: 82 ETALEFLKSMKRYG-FAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY KC + A VF + R+ ++WNA+ISGY + G+ L M V+ D
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEID 200
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF- 356
T + +++ + KL +VH ++K G + D +VCN +I Y G+ E+ E+VF
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+E++D+V+W +M++ Y + ++A + + M+ G PD T SV+SA +
Sbjct: 261 GAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQG 320
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMY--SKCKCIDKALEVFHQIPDKNVISWTSIILG 474
G LH L ++ GL + I+N+LI MY S K +D+AL +F + +K+ +SW SI+ G
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTG 380
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ S +AL FF M + + ++L +C+ + L G+++H L+ G +
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 440
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMID 592
GF+ ++L+ MY +CG ++ A F++ +D S AWN L+ GYA+ G+G +A + F M D
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500
Query: 593 SK 594
+
Sbjct: 501 RR 502
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 268/530 (50%), Gaps = 16/530 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ E AL++L SM+ VD + ++++ + G +HS++ K +V G
Sbjct: 79 GNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAG 138
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A L M+ K + A+ VF + R+ +WN LI GYA+ G A L M + GV
Sbjct: 139 SALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCM-ELEGV 197
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D TF +L K +VH +++ G +D V NA+IT Y +CG + A
Sbjct: 198 EIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAER 257
Query: 254 VFDG-MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG + RD ++WN+M++ Y N + + LF+ M+ + +PD T +SVISA+
Sbjct: 258 VFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGS 317
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR--EEGEKVFSRMESKDVVSWTTM 370
+ G+ +HG VIK G V + N LI MYL ++ +E +F +E+KD VSW ++
Sbjct: 318 HQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSI 377
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
++ + S L + A++ ++ M ++ + D ++VL +C+ L L LG ++H L +++G
Sbjct: 378 LTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGF 437
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
+A++LI MYSKC I+ A + F P + I+W S+I G + R AL +FF
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 497
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMY 544
+K + +T V++L+AC+ IG + G L+ + G P ++D+
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSF----LKSMESDYGIPPRMEHYACMIDLL 553
Query: 545 VRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR+ A + E D W LL G LA + +++
Sbjct: 554 GRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLE 603
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 186/383 (48%), Gaps = 5/383 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L R H I+ G A + N +I+ Y KCG++ A +F +RD +SWN MI+G
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ G + L M+ D + S++ VG ++G++VH ++KMG+ +
Sbjct: 75 FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGN 134
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V + L+ MY E+ +VF + ++ V+W +IS Y A ME
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMEL 194
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG D+ T A +L+ L ++H ++ GL S + N +I YS+C I+
Sbjct: 195 EGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIED 254
Query: 453 ALEVFH-QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACA 510
A VF I +++++W S++ +NN+ EA F +M +L +P+ T S++SA
Sbjct: 255 AERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAF 314
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR--CGRMKPAWNQFNSNE-RDVSAW 567
GK +H ++ G+ F + N+L+ MY++ M A N F S E +D +W
Sbjct: 315 EGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSW 374
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
N +LTG+++ G A +FF M
Sbjct: 375 NSILTGFSQSGLSEDALKFFENM 397
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L +N E+A + MQ L D +++ +G LH +V K
Sbjct: 272 NSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIK 331
Query: 124 TMSHLSVRLGNAFLSMFVKF--GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
V + N+ ++M++K + A +F + ++D SWN ++ G++++G ++AL
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDAL 391
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ M V D Y F VLR+C + L+ G++VHV V++ G+E + V ++LI M
Sbjct: 392 KFFENMR-SQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFM 450
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG + AR FD PK I+WN++I GY ++G L LF +M++ V D +T
Sbjct: 451 YSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 510
Query: 302 SSVISASELVG 312
+V++A +G
Sbjct: 511 VAVLTACSHIG 521
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 268/532 (50%), Gaps = 17/532 (3%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
CLN + +K+ D + + D+ ++ C + D G +H + K S +V
Sbjct: 130 CLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNV 189
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L L M+ K G++ ++ VF + R++ W +I GY K ++E L L+ RM
Sbjct: 190 VL-TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRM-RE 247
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V + YT+ ++ C + L +GK H +I+ G E +V +L+ MYVKCGD+
Sbjct: 248 NSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISN 307
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ D + W AMI GY NG + L LF M V + P+ +T++SV+S L
Sbjct: 308 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGL 367
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG+ +LGR +HG IK+G D +V N L+ MY + + VF KD+V+W ++
Sbjct: 368 VGNLELGRSIHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 426
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + +A+ + M E MP+ +T+AS+ SACA LG+L +G LH +++ G
Sbjct: 427 ISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGF 486
Query: 431 I--SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ S + + L+D Y+KC + A +F I +KN I+W+++I G + +L F
Sbjct: 487 LASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELF 546
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLD 542
+M+ KPN T S+LSAC+ G + GK+ + + F P+ ++D
Sbjct: 547 EEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDY----NFTPSTKHYTCMVD 602
Query: 543 MYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
M R G ++ A + + DV + L G + L E +KM+D
Sbjct: 603 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 654
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 250/481 (51%), Gaps = 7/481 (1%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V++ + + +S++ FG A VF ++ + D + W V++ Y
Sbjct: 76 HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNES 135
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
E + Y + G D+ F L+ C V DL GK++H +++ +V V+
Sbjct: 136 FEVIKFYDLLMKHGFGYDDI-VFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNV-VLTG 193
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY KCG++ + VF+ + R+ + W +MI+GY +N Y +GL+LF MRE V +
Sbjct: 194 LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGN 253
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T +++ A + G+ HG +IK G + L+ MY+ G+ +VF+
Sbjct: 254 EYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 313
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
D+V WT MI Y + ++A+ +Q M G P+ +TIASVLS C +GNL+L
Sbjct: 314 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLEL 373
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H L+++ G+ +AN L+ MY+KC A VF +K++++W SII G
Sbjct: 374 GRSIHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 432
Query: 478 NNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG--VAFDG 534
N EAL F +M ++ PN VT+ S+ SACA +G+L G +HA+++++G +
Sbjct: 433 NGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSV 492
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ ALLD Y +CG + A F++ E++ W+ ++ GY ++G + E F +M+
Sbjct: 493 HVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKK 552
Query: 594 K 594
+
Sbjct: 553 Q 553
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 228/443 (51%), Gaps = 15/443 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E+ L + M+E ++ +E LV C R +G + H + K+ LS L
Sbjct: 232 NDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCL 291
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L M+VK GD+ +A VF + DL W +I GY G +EALSL+Q+M V G
Sbjct: 292 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGV-G 350
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T VL CG V +L+ G+ +H I+ G D +V NAL+ MY KC A+
Sbjct: 351 IKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 409
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ ++D ++WN++ISG+ +NG + L LF M V P+ +T++S+ SA +G
Sbjct: 410 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLG 469
Query: 313 DEKLGREVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G +H Y +K+GF S V V L+ Y G+ E +F +E K+ ++W+ M
Sbjct: 470 SLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAM 529
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y ++E ++ M + P+E T SVLSAC+ G ++ G K +
Sbjct: 530 IGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYK--- 586
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
Y +T ++DM ++ +++AL++ ++P +V + + + G +++R F+
Sbjct: 587 -DYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSR-FDL 644
Query: 485 LIFFRKMMLNLKPNSVTLVSILS 507
K ML+L P+ + ++S
Sbjct: 645 GEIVIKKMLDLHPDDASYYVLVS 667
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 203/394 (51%), Gaps = 9/394 (2%)
Query: 201 PC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
PC +L C + L+ + H + G D+ + L+++Y G ARLVFD +
Sbjct: 58 PCFLLLSKCTNIDSLR---QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQI 114
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P+ D W ++ Y N E + + + ++ + D + S + A V D G+
Sbjct: 115 PEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGK 174
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H ++K+ D+V V L+ MY G + KVF + ++VV WT+MI+ Y +
Sbjct: 175 KIHCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKND 233
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
L ++ + + M + +E T +++ AC L L G H +++G+ +
Sbjct: 234 LYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVT 293
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
+L+DMY KC I A VF++ +++ WT++I+G N EAL F+KM + +KP
Sbjct: 294 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKP 353
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N VT+ S+LS C +G L G+ IH ++++G+ +D + NAL+ MY +C + + A F
Sbjct: 354 NCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVF 412
Query: 558 N-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+E+D+ AWN +++G+++ G A F +M
Sbjct: 413 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 446
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 258/524 (49%), Gaps = 13/524 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
SLEQA K M+ + V LV+ C + G+ LH ++ S + L N
Sbjct: 141 SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 200
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A ++M+ + G L A +F M +RD+ +WN LI Y + G +EA+ LYQ M G K
Sbjct: 201 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQ-EGCK 259
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD TF +L G L K VH H++ G ++ + AL+ MY KC L R +
Sbjct: 260 PDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWL 319
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ MP+R+ ISWN M++ Y ++G K + + M+ V PD +T +++ D
Sbjct: 320 FEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADL 379
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
KLGR+VHG++ + D+ + N L+ MY G E+ E VF + ++V+SWT M++ Y
Sbjct: 380 KLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAY 439
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
D A+ + + G P IT L AC LD G +H A+++G +
Sbjct: 440 SRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDV 499
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + L+ MY +C I A F KN ++W+++I + + E L R M
Sbjct: 500 SLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQ 559
Query: 493 --LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD---GFLPNALLDMYVRC 547
L++ P T S LSAC+ + L GK IH++ FD + N+L+ MY +C
Sbjct: 560 QGLDMSP--ATFASTLSACSNLADLREGKRIHSYVRE--RRFDTEAATVTNSLVTMYGKC 615
Query: 548 GRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
G + A F ++ R D WN +++GYA+ Q A E F +M
Sbjct: 616 GSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRM 659
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 246/461 (53%), Gaps = 9/461 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L+M+ G + A VF M R++ +W +IG +A ++A ++ R+ + G K
Sbjct: 101 AALTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTS-LEQAFKVF-RLMELEGFK 158
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
+ T+ +++ C L+ G +H+ + + + NALITMY +CG L AR +
Sbjct: 159 SNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAI 218
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F M +RD I+WNA+I+ Y ++G + ++L+ +M + PD +T ++++ S G E
Sbjct: 219 FSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSN--GPE 276
Query: 315 KLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
L + VH ++++ G S ++++ L+ MY + E+ +F +M ++V+SW M++
Sbjct: 277 ALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVT 336
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L KAV+ + M+ +G PD +T +L+ C +L LG K+H +
Sbjct: 337 AYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEA 396
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I+ N+L++MY +C +++A VF I +NVISWT+++ NR AL+ F +
Sbjct: 397 DLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIH 456
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L+ +KP +T + L AC AL G+ +H+ A++ G D L +AL+ MY RCG ++
Sbjct: 457 LSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIR 516
Query: 552 PAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ E ++ W+ ++ + + GQ + R M
Sbjct: 517 DAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFM 557
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 252/495 (50%), Gaps = 8/495 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + E +G +E+A+ M + D+ V L+ + E +HS + +
Sbjct: 231 NALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVE 290
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +++ LG A ++M+ K L ++F KM R++ SWNV++ YAK G +A+ +
Sbjct: 291 SGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQI 350
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + GVKPD T +L C G DLK G++VH + EAD+ + N+L+ MY
Sbjct: 351 TEYM-QLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYG 409
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG++ +A +VFDG+ +R+ ISW AM++ Y L+LF + V P +T
Sbjct: 410 RCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLE 469
Query: 304 VISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME- 360
+ A VG E L GR VH ++ G DVS+ + L+ MY G+ + + F E
Sbjct: 470 ALDAC--VGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEV 527
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K+ V+W+ MI+ + + ++ + M+ +G T AS LSAC+ L +L G +
Sbjct: 528 RKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKR 587
Query: 421 LHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H + R + N+L+ MY KC +D A EVF ++ I W +II G ++
Sbjct: 588 IHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHS 647
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
++ +A+ F +M + P+ VT V ILS C+ G L G +A + +G+
Sbjct: 648 QTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYA 707
Query: 539 ALLDMYVRCGRMKPA 553
++D+ R G+++ A
Sbjct: 708 CVIDLLGRAGKLQEA 722
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 228/492 (46%), Gaps = 39/492 (7%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + D LHS + + V LGN + + K L AW F +M ++
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+++W +IG A+ A+ L ++M + GVKPD T
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQML-LEGVKPDNITLL------------------- 100
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
A +TMY CG + A+ VFD MP R+ I+W AMI G
Sbjct: 101 ----------------AALTMYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAVTSLE 143
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ +F +M +F+T +++ A ++G +H ++ + + +CN LI
Sbjct: 144 QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALI 203
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E+ +FS M +D+++W +I+ Y ++AV YQ+M EG PD++
Sbjct: 204 TMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKV 263
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T ++L+ L +H + +G+ I + L+ MYSKC+ ++ +F ++
Sbjct: 264 TFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 323
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P +NVISW ++ + +A+ M L+ +KP++VT V +L+ C L G+
Sbjct: 324 PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 383
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERG 578
++H D L N+LL+MY RCG ++ A F+ +R+V +W +LT Y+ +
Sbjct: 384 KVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQN 443
Query: 579 QGALAEEFFRKM 590
+ +A F +
Sbjct: 444 RQDMALLLFHAI 455
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 196/403 (48%), Gaps = 3/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +A++ + MQ + D V L+ +C G +H +++ + L
Sbjct: 341 HGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLIL 400
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ L+M+ + G++ A VF + R++ SW ++ Y++ D AL L+ + + G
Sbjct: 401 WNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIH-LSG 459
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP TF L C G L +G+ VH ++ G + DV + +AL+ MY +CG + A+
Sbjct: 460 VKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAK 519
Query: 253 LVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
FD +++ ++W+AMI+ + ++G+ +GL M++ +D T +S +SA +
Sbjct: 520 ACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNL 579
Query: 312 GDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D + G+ +H YV + F ++ +V N L+ MY G+ + +VF +D + W +
Sbjct: 580 ADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAI 639
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y AVE + M+ EG PD +T +LS C+ G LD G+ + + GL
Sbjct: 640 ISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGL 699
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ID+ + + +A E + + I + +L
Sbjct: 700 EPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLL 742
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+ R +H +++ + V + N LI Y + ++ + F RM K+V +WT +I
Sbjct: 13 VARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTWTAIIGVCA 72
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ + M EG PD IT+ + L+
Sbjct: 73 QHHCHSLAIILLRQMLLEGVKPDNITLLAALT---------------------------- 104
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
MY C +D A VF +P +NVI+WT++I G +A FR M L
Sbjct: 105 -------MYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAVTSLEQAFKVFRLMELEG 156
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
K N VT V+++ AC++ L G +H ++ A + L NAL+ MY RCGR++ A
Sbjct: 157 FKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDAR 216
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+S ERD+ AWN L+T Y + G A ++ M+
Sbjct: 217 AIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLML 254
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 19/291 (6%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
++ L+ CV +AL D+G +HS ++ + + V LG+A ++M+ + G
Sbjct: 468 LEALDACVGAEAL-------------DKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGS 514
Query: 146 LGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+ A F ++ +W+ +I + + G E L + R G+ TF L
Sbjct: 515 IRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQ-HLRFMQQQGLDMSPATFASTL 573
Query: 205 RTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
C + DL+ GK +H +V RF EA V N+L+TMY KCG L AR VF+ ++D
Sbjct: 574 SACSNLADLREGKRIHSYVRERRFDTEA-ATVTNSLVTMYGKCGSLDCAREVFETSRRQD 632
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WNA+ISGY ++ + + LF M++ V PD +T ++S G G +
Sbjct: 633 TICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYA 692
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-SWTTMIS 372
++++G +I + G +E E+ + ++ + + T+++S
Sbjct: 693 SMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLS 743
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 258/497 (51%), Gaps = 10/497 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G +H +V K L V +GNA ++M+ KFG + A VF M R+
Sbjct: 37 VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRN 96
Query: 161 LFSWNVLIGGYAKAGFFDEALS-LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
L SWN +I G+++ GF + L + M G+ PD+ T VL C D++ G +
Sbjct: 97 LVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRI 156
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H ++ G DV V N+L+ MY KCG L A+++FD +++ +SWN MI G G
Sbjct: 157 HGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYI 216
Query: 280 MKGLMLFIMMREVLVDPDF----MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ LF RE+ + D +T+ +++ A + + +E+HGY I+ GF D V
Sbjct: 217 FEAFNLF---REMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELV 273
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N + Y G E+VF ME+K V SW +I + P KA+ Y M G
Sbjct: 274 ANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGL 333
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+PD TI S+L A A L +L G ++H +R GL I +L+ +Y C A
Sbjct: 334 VPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARL 393
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
+F + +K+ +SW ++I G N +ALI FRK++ + +P+ + +VS+L AC++ A
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L GKE H +AL+ + D F+ + +DMY + G +K + + F+ +D+++WN ++
Sbjct: 454 LRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAA 513
Query: 574 YAERGQGALAEEFFRKM 590
Y G G + E F +M
Sbjct: 514 YGVHGDGEESIELFERM 530
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 268/556 (48%), Gaps = 20/556 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQ--ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS ++ NG + L M E + D LV ++ +C + G+ +H +
Sbjct: 101 NSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLA 160
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K VR+ N+ + M+ K G L A +F K ++ SWN +IGG G+ EA
Sbjct: 161 VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+L++ M ++ + T +L C + L+ KE+H + IR G++ D V N +
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAA 280
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG L+ A VF M + SWNA+I G +NG+ K L L+I M + PD+ T+
Sbjct: 281 YAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTI 340
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ AS + + G+EVHG+V++ G D + L+ +Y+ G +F ME
Sbjct: 341 GSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEE 400
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K VSW MIS Y + LP+ A+ ++ + ++G P +I + SVL AC+ L LG +
Sbjct: 401 KSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKET 460
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A++ L+ + +A + IDMY+K CI ++ VF + +K++ SW +II ++
Sbjct: 461 HCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDG 520
Query: 482 FEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-- 538
E++ F +M + P+ T + IL+ C+ G + G + F G P
Sbjct: 521 EESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQN----FHGIEPKLE 576
Query: 539 ---ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLT-----GYAERGQGALAEEFFR 588
++DM R GR+ A + + D W+ LL+ G E GQ +AE+
Sbjct: 577 HYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQ-IVAEKLLE 635
Query: 589 KMIDSKGNWRKLMGLF 604
+ N+ L L+
Sbjct: 636 LEPKNVENYVSLSNLY 651
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 228/424 (53%), Gaps = 11/424 (2%)
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ +A+ ++ ++ D +TFPCV++ C G D G+ +H VI+ G DV V
Sbjct: 10 LYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVG 69
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK---GLMLFIMMREV 292
NALI MY K G + A VF MP R+ +SWN++ISG+ ENG + K +++ +M E
Sbjct: 70 NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENG-FSKDCFDMLVEMMAGEE 128
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ PD TL +V+ D ++G +HG +K+G S+DV V N L+ MY G E
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA 188
Query: 353 EKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSAC 409
+ +F + K+ VSW TMI C +G + +A ++ M+ + + +E+T+ ++L AC
Sbjct: 189 QMLFDKNNRKNAVSWNTMIGGLCTKGYIF--EAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ L +LH ++R G ++AN + Y+KC + A VF+ + K V SW
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I G N +AL + +M + L P+ T+ S+L A A + +L GKE+H LR
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRH 366
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFF 587
G+ D F+ +LL +Y+ CG A F+ E S +WN +++GY++ G A F
Sbjct: 367 GLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILF 426
Query: 588 RKMI 591
RK++
Sbjct: 427 RKLV 430
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 248/473 (52%), Gaps = 15/473 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-----GFFDEALSLYQR 186
L N L+M+ K G L A VF +RDL +WN ++G YA + G E L L++
Sbjct: 114 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL 173
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ G + P VL+ C L + VH + I+ G E DV V AL+ +Y KCG
Sbjct: 174 LRASLGSTTRMTLAP-VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 232
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ ARL+FD M +RD + WN M+ GY + G + LF + PD ++ +++
Sbjct: 233 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
Query: 307 ASELVG--DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
G D +LG++VHG +K G DVSV N L+ MY G +VF+ M+ D+
Sbjct: 293 GCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 352
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL-----SACACLGNLDLGI 419
+SW +MIS S L +++V + + EG PD T+AS+ AC CL LD G
Sbjct: 353 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGK 412
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H A++ G S + + + ++DMY KC + A VF+ I + ++WTS+I G N
Sbjct: 413 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 472
Query: 480 RSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+AL I+ R + P+ T +++ A + + AL G+++HA+ +++ D F+
Sbjct: 473 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT 532
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+L+DMY +CG ++ A+ F N R+++ WN +L G A+ G A F+ M
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 585
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 222/405 (54%), Gaps = 9/405 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H K V + A ++++ K G + A +F M +RD+ WN+++ GY + G
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 264
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDV 234
EA L+ F G++PD ++ +L C G DL+ GK+VH ++ G ++DV V
Sbjct: 265 EKEAFQLFSE-FHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSV 323
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L+ MY K G AR VF+ M D ISWN+MIS ++ + + LFI + +
Sbjct: 324 ANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383
Query: 295 DPDFMTLSSVI--SASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
PD TL+S+ +A++ G L G+++H + IK GF D+ V + ++ MY+ G+
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 443
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
VF+ + + D V+WT+MIS + D+A+ Y M MPDE T A+++ A
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+C+ L+ G +LH ++ +S + +L+DMY+KC I+ A +F ++ +N+ W
Sbjct: 504 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 563
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++++GL + + EA+ F+ M + ++P+ V+ + ILSAC+ G
Sbjct: 564 AMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 211/407 (51%), Gaps = 16/407 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LRT +L GK H ++ G D + N L+TMY KCG L AR VFD P+RD
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 263 RISWNAMISGYF-----ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++WNA++ Y +G +GL LF ++R L MTL+ V+ G
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
VHGY IK+G DV V L+ +Y G + +F M +DVV W M+ Y
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG--NLDLGIKLHQLAMRTGLISYII 435
L +A + + G PDE ++ +L+ C G +L+LG ++H +A+++GL S +
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLN 494
+AN+L++MYSK C A EVF+ + ++ISW S+I ++ E++ +F +
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382
Query: 495 LKPN-----SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
LKP+ S+TL + AC + L GK+IHAHA++ G D + + +LDMY++CG
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442
Query: 550 MKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
M A FN S DV AW +++G + G A + +M S+
Sbjct: 443 MVNAGIVFNYISAPDDV-AWTSMISGCVDNGNEDQALRIYHRMRQSR 488
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 208/410 (50%), Gaps = 11/410 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE---GLYLHSVVSKTMSHLSV 130
G ++A + + DE ++ ++ C W G D+ G +H + K+ V
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWA-GTDDLELGKQVHGIAVKSGLDSDV 321
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ ++M+ K G A VF M DL SWN +I A++ +E+++L+ +
Sbjct: 322 SVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH- 380
Query: 191 GGVKPDVYTFPCVL-----RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
G+KPD +T + + CG + L +GK++H H I+ G+++D+ V + ++ MY+KC
Sbjct: 381 EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 440
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GD+V A +VF+ + D ++W +MISG +NG + L ++ MR+ V PD T +++I
Sbjct: 441 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
AS V + GR++H VIK+ D V L+ MY GN E+ ++F +M +++
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQL 424
W M+ ++AV ++ M++ G PD ++ +LSAC+ G + LH +
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
G+ I + L+D + + +A +V +P K S +LG
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 670
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ +QAL+ M++ + DE L++ ++G LH+ V K +
Sbjct: 471 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFV 530
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + M+ K G++ A+ +F KM R++ WN ++ G A+ G +EA++L++ M G
Sbjct: 531 GTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM-KSHG 589
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
++PD +F +L C E +H +G E +++ + L+ + G + A
Sbjct: 590 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 649
Query: 252 RLVFDGMPKRDRISWNAMISG 272
V + MP + S N + G
Sbjct: 650 DKVIETMPFKASASINRALLG 670
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 292/551 (52%), Gaps = 15/551 (2%)
Query: 57 SIATKNPN-----SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY 111
S++ KNPN +RL G L A LD M + N D L++ C R +
Sbjct: 1 SLSLKNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNF 60
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGG 170
G +H + ++ L + N +S++ K GD A +F M + RDL SW+ ++
Sbjct: 61 QLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSC 120
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-E 229
+A +A+ + M +G P+ Y F V+R C G+ ++ V++ GY E
Sbjct: 121 FANNSMEWQAIWTFLDMLELG-FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLE 179
Query: 230 ADVDVVNALITMYVK-CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
ADV V LI M+VK GDL A VFD MP+R+ ++W MI+ + + G + LF+
Sbjct: 180 ADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLD 239
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL---S 345
M PD T SSV+SA +G LG+++H VI++G + DV V L+ MY +
Sbjct: 240 MELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 299
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-AVETYQMMEAEGSMPDEITIAS 404
G+ ++ KVF +M +V+SWT +I+ Y S DK A+E + M + P+ + +S
Sbjct: 300 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 359
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL AC L + G +++ A++ G+ S + N+LI MY++ ++ A + F + +KN
Sbjct: 360 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 419
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
++S+ +I+ G N +S EA + F ++ + ++ T S+LS A IGA+ G++IH
Sbjct: 420 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 479
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
L+ G + + NAL+ MY RCG ++ A+ FN E R+V +W ++TG+A+ G
Sbjct: 480 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 539
Query: 583 AEEFFRKMIDS 593
A E F KM+++
Sbjct: 540 ALEMFHKMLET 550
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 264/514 (51%), Gaps = 20/514 (3%)
Query: 73 NGSLE-QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT-MSHLSV 130
N S+E QA+ M EL +E ++R C G ++ V KT V
Sbjct: 123 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 182
Query: 131 RLGNAFLSMFVK-FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+G + MFVK GDLG A+ VF KM +R+L +W ++I +A+ G +A+ L+ M
Sbjct: 183 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 242
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---G 246
G V PD +T+ VL C + L GK++H VIR G DV V +L+ MY KC G
Sbjct: 243 SGYV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 301
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVI 305
+ +R VF+ MP+ + +SW A+I+ Y ++GE K + LF M + P+ + SSV+
Sbjct: 302 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 361
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + D G +V+ Y +K+G + V N LI MY G E+ K F + K++V
Sbjct: 362 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 421
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
S+ ++ Y ++ ++A + + G T AS+LS A +G + G ++H
Sbjct: 422 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 481
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ G S I N LI MYS+C I+ A +VF+++ D+NVISWTS+I G + + AL
Sbjct: 482 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 541
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----A 539
F KM+ KPN +T V++LSAC+ +G + G++ H +++ G +P
Sbjct: 542 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK-HFNSM---YKEHGIVPRMEHYAC 597
Query: 540 LLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILL 571
++D+ R G + A NS D W LL
Sbjct: 598 MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 217/400 (54%), Gaps = 8/400 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKF---GDLGHAWYVFGKMCDRDLFSWNVLIGG 170
G LHS V + L V +G + + M+ K G + + VF +M + ++ SW +I
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 327
Query: 171 YAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y ++G D EA+ L+ +M G ++P+ ++F VL+ CG + D G++V+ + ++ G
Sbjct: 328 YVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 386
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V N+LI+MY + G + AR FD + +++ +S+NA++ GY +N + + +LF +
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 446
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + T +S++S + +G G ++HG ++K G+ + +CN LI MY GN
Sbjct: 447 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 506
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +VF+ ME ++V+SWT+MI+ + +A+E + M G+ P+EIT +VLSAC
Sbjct: 507 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 566
Query: 410 ACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
+ +G + G K + + G++ + ++D+ + + +A+E + +P + +
Sbjct: 567 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 626
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W +++ R++ + E +M+L +P+ +LS
Sbjct: 627 WRTLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLS 665
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 254/463 (54%), Gaps = 3/463 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G++ + ++ + G + A +F KM ++D WNV++ G+ K G + A+ +++ M
Sbjct: 9 VGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ 68
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KP+ TF VL C + G ++H VI G+ D V NAL+ MY K G L A
Sbjct: 69 -TKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ MP + ++WN MI+G+ +NG + +LF M V PD +T +S + +
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTES 187
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
K G+E+HGY+++ G + DV + + LI +Y + K+F + + D+V T +I
Sbjct: 188 ASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAII 247
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + L + A+E ++ + E P+ +T+ASVL ACA L L+LG +LH ++ GL
Sbjct: 248 SGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLD 307
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + ++DMY+KC +D A ++F ++P+K+ + W +II N + EA+ FR+M
Sbjct: 308 ERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQM 367
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L + V++ + LSACA + AL GK IH+ ++ + F +AL+DMY +CG +
Sbjct: 368 GREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNL 427
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F+ E++ +WN ++ Y G ++ F KM++
Sbjct: 428 SVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLE 470
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 257/533 (48%), Gaps = 5/533 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN G A+K + M+ + +++ +C + + G LH +V
Sbjct: 42 NVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVIS 101
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H + NA ++M+ KFG L A +F M D ++ +WN +I G+ + GF DEA L
Sbjct: 102 CGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLL 161
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD TF L + LK+GKE+H +++R G DV + +ALI +Y
Sbjct: 162 FSEMI-SAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF 220
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D+ A +F D + A+ISGY NG L +F + E + P+ +TL+S
Sbjct: 221 KCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLAS 280
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + LG+E+H ++K G + V + ++ MY G + ++F RM KD
Sbjct: 281 VLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKD 340
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W +I+ + P +A++ ++ M EG D ++I++ LSACA L L G +H
Sbjct: 341 AVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHS 400
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ S + + LIDMY KC + A VF + +KN +SW SII +
Sbjct: 401 FMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEV 460
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALL 541
+L F KM+ + ++P+ VT ++ILSAC G + G + G+ ++
Sbjct: 461 SLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIV 520
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
D++ R GR+ A+ + D W LL G LAE R ++D
Sbjct: 521 DLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLD 573
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 203/366 (55%), Gaps = 2/366 (0%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ D V ++LI +Y + G + AR +FD MP +D + WN M++G+ + GE + +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR P+ +T +SV+S + G ++HG VI GF D V N L+ MY F
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G + K+F+ M +VV+W MI+ + + D+A + M + G PD IT AS L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ +L G ++H +R G+ + + + LID+Y KC+ + A ++F Q + +++
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
T+II G LN + +AL FR ++ + PN+VTL S+L ACA + L GKE+HA+
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
L+ G+ + +A++DMY +CGR+ A+ F E+D WN ++T ++ G+ A
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361
Query: 585 EFFRKM 590
+ FR+M
Sbjct: 362 DLFRQM 367
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 222/468 (47%), Gaps = 10/468 (2%)
Query: 44 AQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVR 103
+ ++++ NT +++ T N + NG +++A M + D + +
Sbjct: 125 SDALKLFNTMPDTNVVTWN--GMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLP 182
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
+G +H + + L V L +A + ++ K D+G A +F + + D+
Sbjct: 183 SVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVV 242
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
+I GY G ++AL ++ R + P+ T VL C G+ L GKE+H ++
Sbjct: 243 CTAIISGYVLNGLNNDALEIF-RWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
++ G + V +A++ MY KCG L A +F MP++D + WNA+I+ +NG+ + +
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF M + D +++S+ +SA + G+ +H ++IK F +V + LI MY
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMY 421
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
GN VF M K+ VSW ++I+ Y + ++ + M +G PD +T
Sbjct: 422 GKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFL 481
Query: 404 SVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-- 460
++LSAC G +D GI+ + + G+ + + ++D++ + +++A E +
Sbjct: 482 TILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPF 541
Query: 461 -PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
PD V W +++ R++ + E + +L+L P + +LS
Sbjct: 542 SPDDGV--WGTLLGACRVHG-NVELAEVASRCLLDLDPENSGCYVLLS 586
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
MGF+ D V + LIK+Y G E+ ++F +M +KD V W M++ + P+ AV+
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
++ M + P+ IT ASVLS CA + G +LH L + G ++AN L+ MYSK
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
+ AL++F+ +PD NV++W +I G N EA + F +M+ + P+S+T S
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDV 564
L + +L GKEIH + LR G+A D FL +AL+D+Y +C + A F S D+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+++GY G A E FR +++ K
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEK 270
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 236/432 (54%), Gaps = 6/432 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRM 187
S+ N+FL D +A F + D +S+NV+I G + A AL Y RM
Sbjct: 59 SIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM 118
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
++G +KP+ T+P + C + ++ G+ H VIR G + D V ++LITMY +CG
Sbjct: 119 KFLG-LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK 177
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD + ++D +SWN+MISGY + + + LF M E P+ M+L SV+ A
Sbjct: 178 MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGA 237
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+GD KLG V +V++ + + + + LI MY G+ ++F M+ KD V+W
Sbjct: 238 CGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 297
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI+ Y + + ++A++ +Q M + PD+IT+ +LSACA +G LDLG ++ A
Sbjct: 298 NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 357
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + + L+DMY+KC +D A VF+ +P KN +SW ++I L + ++ EAL
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALAL 417
Query: 488 FRKMML---NLKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDM 543
F+ MM + PN +T V +LSAC G + G+ + H + G+ + ++D+
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 544 YVRCGRMKPAWN 555
+ R G ++ AW+
Sbjct: 478 FSRAGHLEEAWD 489
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 209/395 (52%), Gaps = 13/395 (3%)
Query: 117 LHSVVSKTMSHLSV---------RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
L +V + M H SV + ++ ++M+ + G +G A VF ++ +DL SWN +
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GY+K EA+ L++ M G +P+ + VL CG + DLK G V V+
Sbjct: 200 ISGYSKMRHAGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENK 258
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ + +ALI MY KCGDLV AR +FD M K+D+++WNAMI+GY +NG + + LF
Sbjct: 259 MTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQ 318
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
MR PD +TL ++SA +G LG++V Y + GF DDV V L+ MY G
Sbjct: 319 DMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCG 378
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM--PDEITIASV 405
+ + +VF M K+ VSW MIS +A+ ++ M EG P++IT V
Sbjct: 379 SLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGV 438
Query: 406 LSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
LSAC G +D G +L H ++ GL+ I + ++D++S+ +++A + +P+K
Sbjct: 439 LSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKP 498
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+LG ++ + K++L L+P++
Sbjct: 499 DEVILGALLGACQKRKNIDISERVMKLLLELEPSN 533
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 196/400 (49%), Gaps = 12/400 (3%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
F +L+ C + LK ++H ++ + N+ + D A + F +
Sbjct: 35 FNSLLQQCLSIKQLK---QIHAQLL----TNSIHKPNSFLYKIADLKDFAYASVFFSNIL 87
Query: 260 KRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSV-ISASELVGDEKLG 317
S+N MI G + L + M+ + + P+ +T + I+ S L+ E G
Sbjct: 88 DPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVEN-G 146
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R H VI+ G +D V + LI MY G + KVF + KD+VSW +MIS Y
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+AV ++ M G P+E+++ SVL AC LG+L LG + + + + +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
+ LI MY KC + A +F + K+ ++W ++I G N S EA+ F+ M M +
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ +TL+ ILSACA IGAL GK++ +A G D ++ AL+DMY +CG + A+
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F +++ +WN +++ A GQ A F+ M++ G
Sbjct: 387 FYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGG 426
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 166/353 (47%), Gaps = 38/353 (10%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M E +E +LV+++ C G ++ V + L+ +G+A +
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K GDL A +F M +D +WN +I GYA+ G +EA+ L+Q M + PD
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM-RMSSTAPDQ 329
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T +L C + L GK+V ++ G++ DV V AL+ MY KCG L A VF G
Sbjct: 330 ITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYG 389
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLF-IMMRE-VLVDPDFMTLSSVISASELVGDEK 315
MPK++ +SWNAMIS +G+ + L LF MM E V P+ +T V+SA G
Sbjct: 390 MPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449
Query: 316 LGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
GR + H G + + ++ ++ G+ EE +W +++
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE--------------AWDFVMT-- 493
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+P+K PDE+ + ++L AC N+D+ ++ +L +
Sbjct: 494 ----MPEK--------------PDEVILGALLGACQKRKNIDISERVMKLLLE 528
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG E+A+K M+ + D+ L+ ++ C D G + S+
Sbjct: 298 NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 357
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G A + M+ K G L +A+ VF M ++ SWN +I A G EAL+L
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALAL 417
Query: 184 YQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITM 241
++ M GG V P+ TF VL C + G+ + H+ FG ++ + ++ +
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 242 YVKCGDLVRARLVFDGMPKR 261
+ + G L A MP++
Sbjct: 478 FSRAGHLEEAWDFVMTMPEK 497
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 267/528 (50%), Gaps = 8/528 (1%)
Query: 74 GSLEQALKYLDSMQELNICVD---EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
G E+AL Y Q CVD E L +++R C + G + G +HS V K+ V
Sbjct: 120 GYNEKALLYFLEFQR--TCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDV 177
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+G + + ++ K G++ A VF + + +W +I GY K+G + +L L+ M
Sbjct: 178 YVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMM-E 236
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V PD Y +L C + LK GK++H +V+R + DV N LI Y KCG +
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+ +FD + ++ ISW MI+GY +N + + L M + PD SSV+++
Sbjct: 297 GKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGS 356
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
V + GR++H YVIK+ D V N LI MY ++ ++VF + VV + M
Sbjct: 357 VDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAM 416
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y A+E +Q M + P +T S+L A L L L ++H L ++ G
Sbjct: 417 IEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGF 476
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
++ LID+YSKC CI A VF +K+++ W S+ G L +S EA +
Sbjct: 477 SLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSD 536
Query: 491 MMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ L+ +PN T ++ +A + + +L G++ H +++G+ D F+ NAL+DMY +CG
Sbjct: 537 LQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGS 596
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
++ A F+S+ +D + WN +++ YA+ G+ A F M+ + N
Sbjct: 597 VEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNIN 644
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 245/451 (54%), Gaps = 10/451 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V L N L + K G + A +F KM +R+L SW+ ++ Y + G+ ++AL +
Sbjct: 75 VFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQR 134
Query: 190 VGGVKPDVYTFPCVLRTC----GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
K + Y ++R C GG P G +VH +VI+ G+ DV V +L+ +Y K
Sbjct: 135 TCVDKLNEYILASIIRACVQRDGGEP----GSQVHSYVIKSGFGEDVYVGTSLVVLYAKH 190
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G++ +ARLVFDG+ + ++W A+I+GY ++G L LF +M E V PD LSS++
Sbjct: 191 GEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSIL 250
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+A ++G K G+++H YV++ DVS N LI Y G + G+ +F R++ K+++
Sbjct: 251 NACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNII 310
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTMI+ Y + +AVE M G PDE +SVL++C + L G ++H
Sbjct: 311 SWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYV 370
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ L + N LIDMYSKC +D A VF + +V+ + ++I G AL
Sbjct: 371 IKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGAL 430
Query: 486 IFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F++M L ++ P+ +T VS+L A + L K+IH ++ G + D F +AL+D+Y
Sbjct: 431 EVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVY 490
Query: 545 VRCGRMKPAWNQFN-SNERDVSAWNILLTGY 574
+C ++ A F + +D+ WN L +GY
Sbjct: 491 SKCSCIRDARYVFEGTTNKDIVVWNSLFSGY 521
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 244/482 (50%), Gaps = 2/482 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E +L+ + M E N+ D+ L +++ C G +H+ V ++ + + V
Sbjct: 221 SGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVST 280
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N + + K G + +F ++ +++ SW +I GY + + EA+ L MF +G
Sbjct: 281 YNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGW 340
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KPD Y VL +CG V L+ G+++H +VI+ E D V NALI MY KC L A+
Sbjct: 341 -KPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAK 399
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + + +NAMI GY G L +F MR V P F+T S++ S +
Sbjct: 400 RVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALL 459
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+L +++HG +IK GFS D + LI +Y + VF +KD+V W ++ S
Sbjct: 460 CLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFS 519
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + ++A + Y ++ P+E T A++ +A + L +L G + H M+ GL S
Sbjct: 520 GYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLES 579
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I N L+DMY+KC +++A ++F K+ W S+I + + EAL F M+
Sbjct: 580 DPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMV 639
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
N+ PN VT VS+LSAC+ +G + G + + R G+ +++ + R GR+
Sbjct: 640 SNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLT 699
Query: 552 PA 553
A
Sbjct: 700 EA 701
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 38/325 (11%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H ++ K L +A + ++ K + A YVF ++D+ WN L GY
Sbjct: 467 IHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLK 526
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EA LY + + +P+ +TF + + L G++ H V++ G E+D + N
Sbjct: 527 SEEAFKLYSDL-QLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN 585
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG + A +F +D WN+MIS Y ++G+ + L +F M ++P
Sbjct: 586 ALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINP 645
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+++T SV+SA VG + G + + + + G + ++ + G E +
Sbjct: 646 NYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFI 705
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M + P + S+LSAC GN++
Sbjct: 706 EKMTIR----------------------------------PAALVWRSLLSACRVFGNVE 731
Query: 417 LGIKLHQLAMRTGLI---SYIIIAN 438
L ++A+ + SY++++N
Sbjct: 732 LAKHAAEMAISIDPMDSGSYVMLSN 756
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 254/479 (53%), Gaps = 13/479 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H +S S +V LGN + + K G + A F + ++ +SW ++ YA+ G
Sbjct: 46 IHDRISGAAS-ANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGH 104
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVV 235
+ AL LY+RM ++P+ + VL C + L+ GK +H + G + DV +
Sbjct: 105 YRAALDLYKRM----DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILE 160
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRI-SWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L+TMY KCG L A+ +F+ M R + SWNAMI+ Y ++G + + + L+ ++ V
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDV 217
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+P T +SV+SA +G GR++H + G D+S+ N L+ MY ++ K
Sbjct: 218 EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAK 277
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F R+ +DVVSW+ MI+ + + L D+A+E Y M+ EG P+ T ASVL ACA +G+
Sbjct: 278 IFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 337
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G +H + G ++ L+D+Y+ +D+A +F QI +++ WT +I G
Sbjct: 338 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 397
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLV--SILSACARIGALMCGKEIHAHALRIGVAF 532
L +R+M K + ++ ++SACA +GA ++ H+ G+
Sbjct: 398 YSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMIS 457
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D L +L++MY R G ++ A F+ + RD AW L+ GYA+ G+ LA +++M
Sbjct: 458 DFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEM 516
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 271/531 (51%), Gaps = 29/531 (5%)
Query: 57 SIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
+IA KN S L NG AL D + +++ + ++ C +E
Sbjct: 83 AIARKNDYSWGSMLTAYAQNGHYRAAL---DLYKRMDLQPNPVVYTTVLGACASIEALEE 139
Query: 114 GLYLHSVVSKTMS-HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGY 171
G +HS +S T L V L N+ L+M+ K G L A +F +M R + SWN +I Y
Sbjct: 140 GKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAY 199
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A++G F+EA+ LY+ M V+P V TF VL C + L +G+++H + G E D
Sbjct: 200 AQSGHFEEAIRLYEDM----DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELD 255
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ + NAL+TMY +C L A +F +P+RD +SW+AMI+ + E + + + + M+
Sbjct: 256 LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 315
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V P++ T +SV+ A VGD + GR VH ++ G+ + L+ +Y S+G+ +E
Sbjct: 316 EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDE 375
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACA 410
+F ++E++D WT +I Y +E Y+ M+ +P +I + V+SACA
Sbjct: 376 ARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACA 435
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG + H G+IS ++A +L++MYS+ ++ A +VF ++ ++ ++WT+
Sbjct: 436 SLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTT 495
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G + AL +++M L +P+ +T + +L AC+ G GK+ L I
Sbjct: 496 LIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQ-----LFIS 550
Query: 530 VAFD-GFLPN-----ALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILL 571
+ D PN ++D+ R GR+ A N+ DV+ W+ LL
Sbjct: 551 IQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVT-WSSLL 600
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 209/392 (53%), Gaps = 14/392 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
LR C DL+ +++H I A+V + N ++ Y KCG + AR+ FD + +++
Sbjct: 33 ALRQC---QDLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKN 88
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
SW +M++ Y +NG Y L L+ M + P+ + ++V+ A + + G+ +H
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHS 145
Query: 323 YVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSVLP 380
+ G DV + N L+ MY G+ E+ +++F RM + V SW MI+ Y S
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHF 205
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++A+ Y+ M+ E P T SVLSAC+ LG LD G K+H L G + + N L
Sbjct: 206 EEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 262
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ MY++CKC+D A ++F ++P ++V+SW+++I + EA+ F+ KM L ++PN
Sbjct: 263 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 322
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
T S+L ACA +G L G+ +H L G AL+D+Y G + A + F+
Sbjct: 323 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 382
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
E RD W +L+ GY+++G E +R+M
Sbjct: 383 IENRDEGLWTVLIGGYSKQGHRTGVLELYREM 414
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 267/547 (48%), Gaps = 14/547 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL--HSVVSKTMSH 127
L NG LE+ L+ M+ + + +A +V LC GL + H +VS +
Sbjct: 120 LSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ 179
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+SV N+ ++MF G + A +F +M + D S N +I Y+ G + ++ M
Sbjct: 180 VSV--ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G++PD T ++ C G +H +R ++ V V+NAL+ MY G
Sbjct: 238 RH-HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L A +F M +RD ISWN MIS Y +N L + P+ +T SS + A
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGA 356
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G G+ VH V+++ ++ V N LI MY + E+ EKVF M + DVVS+
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSY 416
Query: 368 TTMISCYEGSVLPD--KAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQL 424
+I Y +VL D KA++ + + + G P+ IT+ ++ + +L + G LH
Sbjct: 417 NVLIGGY--AVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAY 474
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+RTG +S +AN+LI MY+KC ++ + +F+ I +KN++SW +II EA
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEA 534
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F M K + V L LS+CA + +L G ++H ++ G+ D ++ NA +DM
Sbjct: 535 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDM 594
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKL 600
Y +CG+M R WN L++GYA+ G AEE F++M+ K ++
Sbjct: 595 YGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTF 654
Query: 601 MGLFRKC 607
+ L C
Sbjct: 655 VALLSAC 661
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 270/529 (51%), Gaps = 12/529 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY----LHSVVSKTMSHLSVRLGN 134
A + L M+E + + AL +LV CE +RG DEG+ +H++ + +V +G
Sbjct: 25 AFELLRGMRERGVPLSGFALASLVTACE-RRGRDEGIACGAAIHALTHRAGLMGNVYIGT 83
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L ++ G + A +F +M +R++ SW L+ + G+ +E L Y++M GV
Sbjct: 84 ALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQM-RREGVP 142
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
+ F V+ CG + + G +V HVI G + V V N+LITM+ G + A +
Sbjct: 143 CNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKL 202
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M + D IS NAMIS Y G K ++F MR + PD TL S++S
Sbjct: 203 FDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHF 262
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G +H ++ V+V N L+ MY + G + E +F M +D++SW TMIS Y
Sbjct: 263 SHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSY 322
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A++T + +P+ +T +S L AC+ G L G +H + ++ L +
Sbjct: 323 VQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 382
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
++ N+LI MY KC ++ A +VF +P +V+S+ +I G + +A+ F +
Sbjct: 383 LVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSA 442
Query: 494 NLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KPN +T+++I + L G+ +HA+ +R G D ++ N+L+ MY +CG ++
Sbjct: 443 GIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 502
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL 600
+ N FNS +++ +WN ++ A+ G G EE + ID + KL
Sbjct: 503 STNIFNSITNKNIVSWNAIIAANAQLGHG---EEALKLFIDMQHAGNKL 548
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 237/466 (50%), Gaps = 10/466 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D L +L+ +C + G +HS+ ++ SV + NA ++M+ G L A ++F
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RDL SWN +I Y + +AL ++F + P+ TF L C L
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI-PNHLTFSSALGACSSPGAL 363
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
GK VH V++ + ++ V N+LITMY KC + A VF MP D +S+N +I GY
Sbjct: 364 IDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGY 423
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDD 332
+ K + +F +R + P+++T+ ++ + D GR +H Y+I+ GF D
Sbjct: 424 AVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSD 483
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N LI MY GN E +F+ + +K++VSW +I+ ++A++ + M+
Sbjct: 484 EYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQH 543
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G+ D + +A LS+CA L +L+ G++LH L M++GL S + N +DMY KC K
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKC---GK 600
Query: 453 ALEVFHQIPDKNVIS---WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
E+ +PD+ + W ++I G EA F++M+ + KP+ VT V++LSA
Sbjct: 601 MNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSA 660
Query: 509 CARIGALMCGKEIH-AHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
C+ G + G + + + A GV+ ++D+ R GR A
Sbjct: 661 CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEA 706
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 207/439 (47%), Gaps = 9/439 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N + ALK L + N + + + C +G +H++V +
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GN+ ++M+ K + A VF M D+ S+NVLIGGYA ++
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA---VLEDGTKA 432
Query: 184 YQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALIT 240
Q W+ G+KP+ T + + DL G+ +H ++IR G+ +D V N+LIT
Sbjct: 433 MQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLIT 492
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG+L + +F+ + ++ +SWNA+I+ + G + L LFI M+ D +
Sbjct: 493 MYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVC 552
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L+ +S+ + + G ++HG +K G D V N + MY G E ++
Sbjct: 553 LAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQA 612
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ W T+IS Y +A ET++ M A G PD +T ++LSAC+ G +D GI
Sbjct: 613 IRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGID 672
Query: 421 LHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLN 478
+ +A G+ I ++D+ + +A ++P N + W S++ R
Sbjct: 673 YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSR-T 731
Query: 479 NRSFEALIFFRKMMLNLKP 497
+++ E K +L L P
Sbjct: 732 HKNLEIGRKAAKKLLELDP 750
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 156/324 (48%), Gaps = 5/324 (1%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG-DEKL 316
MP R +W +SG G + L MRE V L+S+++A E G DE +
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 317 --GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G +H + G +V + L+ +Y S G + ++F M ++VVSWT ++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++ + Y+ M EG + A+V+S C L N G+++ + +GL + +
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+AN+LI M+ + A ++F ++ + + IS ++I + + F M +
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
L+P++ TL S++S CA G IH+ LR + + NAL++MY G++ A
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 554 WNQF-NSNERDVSAWNILLTGYAE 576
F N + RD+ +WN +++ Y +
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQ 324
>gi|302772569|ref|XP_002969702.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
gi|300162213|gb|EFJ28826.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
Length = 689
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 245/461 (53%), Gaps = 14/461 (3%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDV 197
MF K GD+ A +F + +LFSW +++ A+ G EAL L +RM +G G +PDV
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRM--IGEGARPDV 58
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALITMYVKCGDLVRARLVFD 256
F +L C DL++GK H ++ G E+ V+ NALI MY KC +L AR FD
Sbjct: 59 VCFVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFD 118
Query: 257 GMPK----RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
M RD ++WN++++ + NG + LF M + P +TL+ V+ + G
Sbjct: 119 RMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--G 176
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D + G+ H V+ +G D + N L+KMY G EE VF ++ KD++SW MIS
Sbjct: 177 DRQ-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMIS 235
Query: 373 CYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
++AVE + ++ EG PDE+T SV+ AC+CLG+LDL + +L G
Sbjct: 236 LEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFD 295
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ N +++M+ K C+D A F ++P KNV+SW +I G N + L FR+M
Sbjct: 296 DDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQM 355
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+K NSVT VS+L AC+ I AL G+E+H G+ + AL++MY +C +
Sbjct: 356 DQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEEL 415
Query: 551 KPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + + A N++++ YA+ G A +F M
Sbjct: 416 QFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGM 456
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 254/566 (44%), Gaps = 33/566 (5%)
Query: 35 KTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVD 94
K R+ AQ ++ + + + T N S L NG LE+A + M+ I
Sbjct: 106 KCRNLDLARAQFDRMEHQDHGRDVVTWN--SLLAAFTHNGYLEEAARLFQEMEVEGIKPS 163
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
L ++ C R +G H V L N+ + M+ + G L + VF
Sbjct: 164 SVTLTCVLESCSGDR---QGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFR 220
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ +D+ SWNV+I A+ G +EA+ L + + G +PD TF V+ C + DL
Sbjct: 221 AIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLD 280
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+ V G++ D+ + NA++ M+ K G L AR FD +P ++ +SWN +ISGY
Sbjct: 281 LCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYA 340
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+N + + L LF M + V + +T S++ A + GRE+H + G
Sbjct: 341 QNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTV 400
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V LI MY + +++ R +S +V+ MIS Y ++A++ M+ G
Sbjct: 401 VATALINMYGKCEELQFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAG 460
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII-------IANTLIDMYSKC 447
D +T L ACAC + G ++ + TG IS ++ I L+ MYSKC
Sbjct: 461 VKADVVTYIGALEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKC 520
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
C+D AL + + +++WTS++ R+ EAL +M + + P+ V +++
Sbjct: 521 GCVDDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVV 580
Query: 507 SACARIGALMCGKEIHAHALRI-------GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
AC+ G L H +R+ G A L ++D+ R GR++ A ++
Sbjct: 581 FACSHAGLL------HEALVRLAWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHA 634
Query: 560 --NERDVSAWNILLT-----GYAERG 578
E D AW LL G ERG
Sbjct: 635 MPYEPDSLAWMALLGACTVHGDLERG 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 14/364 (3%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
M+ KCGD+ AR +F G+ + + SW +++ NG ++ L+L M PD +
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC-NPLIKMYLSFGNREEGEKVFSRM 359
+++ D + G+ H +++ G V N LI MY N + F RM
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 360 E----SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
E +DVV+W ++++ + + ++A +Q ME EG P +T+ VL +C+ G+
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII-LG 474
G H + GL + N+L+ MY++C ++++ VF I K++ISW +I L
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237
Query: 475 LRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
RL + S EA+ R++ L +P+ VT +S++ AC+ +G L I G
Sbjct: 238 ARLGS-SEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDD 296
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D L NA+++M+ + G + A F+ ++V +WN L++GYA+ QG E FR+M
Sbjct: 297 DLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQM- 355
Query: 592 DSKG 595
D +G
Sbjct: 356 DQEG 359
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 256/466 (54%), Gaps = 4/466 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
++R LS + GDL A V + D +++ V +G +A AG +AL+L++ M
Sbjct: 54 ALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMR 113
Query: 189 W-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
DV L+ D + G+ +H + ++ G AD V+N L+ MY K GD
Sbjct: 114 RRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGD 172
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L AR VFD + R+ +SW +M+SG +NG +GL LF MRE V P T++SV+ A
Sbjct: 173 LENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMA 232
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
++G GR VHG VIK G + + ++ MY+ G E+ ++F + D+V W
Sbjct: 233 CTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLW 292
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TTMI Y + P A+ + + +P+ +TIA+VLSA A L NL LG +H ++++
Sbjct: 293 TTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVK 352
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+I ++ N L+DMY+KCK + +A +F +I +K+V++W S+I G N+ EAL+
Sbjct: 353 LLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALML 412
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F +M + P+++++V+ LSAC +G L+ GK H +A++ + ++ ALL++Y +
Sbjct: 413 FSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNK 472
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
C + A F+ +ER+ W ++ GY +G A + + KM+
Sbjct: 473 CADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKML 518
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 244/464 (52%), Gaps = 9/464 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + M+ K GDL +A VF ++ R++ SW ++ G + GF +E L+L+ M V
Sbjct: 161 NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEM-REERV 219
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P YT VL C + L +G+ VH VI+ G + + A++ MYVKCG++ AR
Sbjct: 220 LPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARR 279
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD + D + W MI GY +NG + L+LF + V + P+ +T+++V+SAS + +
Sbjct: 280 LFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRN 339
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR +H +K+ ++ V N L+ MY E +F R+ +KDVV+W ++I+
Sbjct: 340 LSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAG 399
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + ++A+ + M +GS PD I+I + LSAC CLG+L +G H A++ +S
Sbjct: 400 YVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSN 459
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + L+++Y+KC + A VF ++ ++N ++W ++I G + S ++ KM+
Sbjct: 460 VYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLK 519
Query: 494 -NLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
N++PN V SILS C+ G + GK + A I + + ++D+ R G
Sbjct: 520 DNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHY--ACMVDVLARAGN 577
Query: 550 MKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A Q D+S W L G + EE +M+
Sbjct: 578 LEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMM 621
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 214/441 (48%), Gaps = 6/441 (1%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
CL NG E+ L + M+E + E + +++ C +G ++H V K +
Sbjct: 198 CLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFN 257
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ A L M+VK G++ A +F ++ DL W +I GY + G +AL L+ +
Sbjct: 258 PFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKF 317
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V + P+ T VL + +L G+ +H ++ + V+NAL+ MY KC L
Sbjct: 318 V-HIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALS 376
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F + +D ++WN++I+GY EN + LMLF MR PD +++ + +SA
Sbjct: 377 EANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACV 436
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+GD +G+ H Y +K F +V V L+ +Y + ++VFS M ++ V+W
Sbjct: 437 CLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGA 496
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRT 428
MI Y +++ M + P+E+ S+LS C+ G + +G + +A
Sbjct: 497 MIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYF 556
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR-SFEALI 486
+ + ++D+ ++ +++ALE ++P IS W + + G +L++R F
Sbjct: 557 NITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEA 616
Query: 487 FFRKMMLNL-KPNSVTLVSIL 506
R M+L+ KP+ L+S L
Sbjct: 617 INRMMVLHPDKPDFYVLMSNL 637
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 12/238 (5%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL M+ D ++VN + C G H+ K +V + A L
Sbjct: 408 EALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALL 467
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+++ K DL A VF +M +R+ +W +IGGY G ++ L +M ++P+
Sbjct: 468 NLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKML-KDNIQPNE 526
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFD 256
F +L TC + GK + + F + ++ + + G+L A
Sbjct: 527 VVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQ 586
Query: 257 GMPKRDRIS-WNAMISG-----YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
MP IS W A + G E GE M+ + + PDF L S + S
Sbjct: 587 KMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDK----PDFYVLMSNLYTS 640
>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
Length = 597
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 254/487 (52%), Gaps = 20/487 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH + + S + N + M+ K G + AW VF + R++FSWN++I +A+ G
Sbjct: 1 LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60
Query: 177 FDEALSLYQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ +++L+ RM G+ P TF L + +L G+++H I G E+D V
Sbjct: 61 PERSVALFWRMIREEPGIIPTRITF---LHALEKLKNLAEGRKIHELAITVGLESDPAVG 117
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
A++TMY K L A+ VFD + +RD ++W A+I+ Y +NG + L L+ M V
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVA 177
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ T + VI A +G +G +H + G + V N LI +Y + + E++
Sbjct: 178 PNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERI 237
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACACLGN 414
F RM + VSW +MI+ Y + P A++ Y+ M +GS+ D +T +VL AC +
Sbjct: 238 FQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQED 297
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G +H+ A+ GL S++++A+ + MY +C +++++ F ++ K+ ++W+++I
Sbjct: 298 LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357
Query: 475 LRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
L N S AL F+R+M+ + +PN T +S+L AC+ G +IH H + G+
Sbjct: 358 LAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADE---GIKIHQHIVDSGIVH 414
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS---------NERDVSAWNILLTGYAERGQGALA 583
+ A+ +MY +CGR+ A F+S + DVS W +++ A G A
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVS-WMNMISALARHGSIDEA 473
Query: 584 EEFFRKM 590
E FR+M
Sbjct: 474 LELFREM 480
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 229/478 (47%), Gaps = 29/478 (6%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG +H + +G A ++M+ K L A VF ++ RD+ +W LI Y
Sbjct: 97 EGRKIHELAITVGLESDPAVGTAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYT 156
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +EAL LY M GV P+ YTF V+ C + L G +H + G E+ +
Sbjct: 157 QNGHCEEALDLYSSMD-PDGVAPNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWI 215
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-- 290
+V N+LI +Y C L A +F MP+R +SWN+MI+ Y NG + L+ MR
Sbjct: 216 EVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGD 275
Query: 291 -EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
V +DP +T +V+ A D GR +H I G + + + + MY G+
Sbjct: 276 GSVKLDP--VTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSV 333
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSA 408
EE F RME KD V+W+ +I+ + A+ Y +M+ + + P+E T SVL A
Sbjct: 334 EESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEA 393
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-------P 461
C+ D GIK+HQ + +G++ +I+ + +MY+KC +D+A E+F +
Sbjct: 394 CSF---ADEGIKIHQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQ 450
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-- 518
N +SW ++I L + EAL FR+M L KP+ + +SIL C+ G + G
Sbjct: 451 SANDVSWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLG 510
Query: 519 ---KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
I H L V G L+D+ R G + A + + E D AW+ L
Sbjct: 511 HFLAMIQDHGLAPRVEHYG----CLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFL 564
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 208/378 (55%), Gaps = 8/378 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + G+ + V N ++ MY KCG + A +VF + R+ SWN +I+ + +NG
Sbjct: 1 LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60
Query: 279 YMKGLMLFI-MMREVLVDPDFM-TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + LF M+RE +P + T + + A E + + GR++H I +G D +V
Sbjct: 61 PERSVALFWRMIRE---EPGIIPTRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVG 117
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
++ MY + + ++VF +++ +DVV+WT +I+ Y + ++A++ Y M+ +G
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVA 177
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P++ T V+ ACA LG LD+GI +H GL S+I +AN+LI++Y CK + A +
Sbjct: 178 PNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERI 237
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGA 514
F ++P ++ +SW S+I N +A+ +++M + +K + VT V++L AC
Sbjct: 238 FQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQED 297
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
L G+ IH A+ G+ L +A + MY RCG ++ + F E +D AW+ ++
Sbjct: 298 LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357
Query: 574 YAERGQGALAEEFFRKMI 591
A+ G+ + A F+R+MI
Sbjct: 358 LAQNGESSSALHFYRRMI 375
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 15/418 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL SM + ++ ++ C D G+ +H+ ++ + +
Sbjct: 158 NGHCEEALDLYSSMDPDGVAPNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEV 217
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ ++++ L A +F +M R SWN +I YA G +A+ LY+RM G
Sbjct: 218 ANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGS 277
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VK D TF VL C DL G+ +H I G + + + +A ++MY +CG + +
Sbjct: 278 VKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESM 337
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELV 311
F+ M +D ++W+A+I+ +NGE L + M+ P+ T SV+ A
Sbjct: 338 ATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSF- 396
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-------ESKDV 364
DE G ++H +++ G + + MY G + ++FS M +S +
Sbjct: 397 ADE--GIKIHQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSAND 454
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSW MIS D+A+E ++ M EG P EI S+L C+ G ++ G+ H L
Sbjct: 455 VSWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLG-HFL 513
Query: 425 AM--RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
AM GL + LID+ + +D A ++ Q+P + + +W++ + RL++
Sbjct: 514 AMIQDHGLAPRVEHYGCLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFLGSCRLHS 571
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 253/472 (53%), Gaps = 12/472 (2%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
+GD+ A VF + +F WN +I GY++ F +AL +Y +M + V PD +TFP
Sbjct: 66 YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKM-QLARVSPDSFTFPH 124
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ CGG+ L+ G+ VH V R G+EADV V N LI +Y KC L AR VF+G+P +
Sbjct: 125 LLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPE 184
Query: 263 R--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R +SW A++S Y +NGE ++ L +F MR++ V PD + L SV++A + D + GR +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSI 244
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+KMG + + L MY G + +F +M+S +++ W MIS Y +
Sbjct: 245 HASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFA 304
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A++ + M + PD I+I S +SACA +G+L+ + + R+ + I++ L
Sbjct: 305 KDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSAL 364
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
IDM++KC ++ A VF + D++V+ W+++I+G L+ ++ EA+ +R M + + PN
Sbjct: 365 IDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPND 424
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN- 558
VT + +L AC G + G + ++D+ R G + A+
Sbjct: 425 VTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKC 484
Query: 559 -SNERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ V+ W LL+ + E G+ A A++ F + G++ +L L+
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGKYA-AQQLFSIDPSNTGHYVQLSNLY 535
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 198/378 (52%), Gaps = 4/378 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+++H ++ G + ++ LI GD+ AR VFD +P+ WNA+I GY N
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L+++ M+ V PD T ++ A + ++GR VH V ++GF DV V
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 337 NPLIKMYLSFGNREEGEKVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI +Y VF + + +VSWT ++S Y + P +A+E + M
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD + + SVL+A CL +L+ G +H M+ GL + + +L MY+KC + A
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F ++ N+I W ++I G N + +A+ F +M+ +++P+++++ S +SACA++G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLT 572
+L + + + R D F+ +AL+DM+ +CG ++ A + F+ +RDV W+ ++
Sbjct: 338 SLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIV 397
Query: 573 GYAERGQGALAEEFFRKM 590
GY GQ A +R M
Sbjct: 398 GYGLHGQAREAISLYRAM 415
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ M+++++ D ALV+++ + ++G +H+ V K L
Sbjct: 200 NGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDL 259
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +M+ K G + A +F KM +L WN +I GYAK GF +A+ L+ M
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMI-NKD 318
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PD + + C V L++ + + +V R Y DV + +ALI M+ KCG + AR
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD RD + W+AMI GY +G+ + + L+ M V P+ +T ++ A G
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSG 438
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG + A+ M ++ D ++ + + C ++ ++ VS+
Sbjct: 292 NAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSR 351
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + +A + MF K G + A VF + DRD+ W+ +I GY G EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISL 411
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+ M GV P+ TF +L C ++ G + +I +
Sbjct: 412 YRAM-ERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLG 470
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG-----YFENGEYMKGLMLFIMMREVLVDPD 297
+ G L +A V MP + ++ W A++S + E G+Y + I DP
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSI-------DPS 523
Query: 298 ----FMTLSSVISASEL 310
++ LS++ +A+ L
Sbjct: 524 NTGHYVQLSNLYAAARL 540
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 251/484 (51%), Gaps = 3/484 (0%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
S E L +LD + N +E L +++ C G + +H K+ +V +G
Sbjct: 22 SEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSIDK-QMHGFAVKSGFDRNVYVGT 80
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ + ++ K G++ A VF + ++ +W +I K G + +L L+ +M V
Sbjct: 81 SLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLFSQMRETN-VV 139
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD Y VL C + ++ GK++H HV+R G E DV VN LI Y K G + AR +
Sbjct: 140 PDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKVQSARKL 199
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FDGM R+ ISW AMI+GY +N + + LFI M + PD +S++++ +
Sbjct: 200 FDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEAL 259
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LGR+VH Y IK D+ + N LI MY G+ + KVF M ++VVS+ +I Y
Sbjct: 260 ELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGY 319
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A+ ++ M P +T S+L A A L L+LG ++H L + G+ I
Sbjct: 320 STLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEI 379
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ LID YSKC C+ A VF ++ +K+++ W +++ G + EAL + ++ ++
Sbjct: 380 FAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQIS 439
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
KPN VT ++ +A + + +L G++ H H ++ G+ F N+L+DMY +CG ++ A
Sbjct: 440 EPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDA 499
Query: 554 WNQF 557
F
Sbjct: 500 RKAF 503
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 242/440 (55%), Gaps = 9/440 (2%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPD 212
M +R+L SW+ ++ Y+K GF +EAL ++ P+ Y V+ C GG D
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
K++H ++ G++ +V V +L+ +Y K G++ ARLVFDG+ ++ ++W +I+
Sbjct: 61 ----KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITA 116
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ G L LF MRE V PD LSSV+ A + + G+++HG+V++ G D
Sbjct: 117 CVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEID 176
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
VS N LI Y G + K+F M ++V+SWT MI+ Y + +AV+ + M
Sbjct: 177 VSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTR 236
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD S+L++C L L+LG ++H +++ + S I + N LIDMY+KC ++
Sbjct: 237 LGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLND 296
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +VF + +NV+S+ ++I G + EA+ FR+M L P+ +T VS+L A A
Sbjct: 297 ARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASAT 356
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ AL GK+IHA + G++ + F +AL+D Y +C + A F+ E+D+ WN +
Sbjct: 357 LSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAM 416
Query: 571 LTGYAERGQGALAEEFFRKM 590
L GY ++ + A + + ++
Sbjct: 417 LFGYTQQLENEEALKLYTEL 436
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 231/469 (49%), Gaps = 17/469 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E +L+ M+E N+ D L +++ C G +H V + + V
Sbjct: 121 GRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFV 180
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + K G + A +F M DR++ SW +I GY + F EA+ L+ M +G
Sbjct: 181 NVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR- 239
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD + +L +CG + L+ G++VH + I+ E+D+ + N LI MY KCG L AR
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M R+ +S+NA+I GY + + + LF MR ++ P F+T S++ AS +
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG+++H + K G S ++ + LI Y + VF +M KD+V W M+
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFG 419
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + ++A++ Y ++ P+ +T A++ +A + L +L G + H ++TGL S+
Sbjct: 420 YTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSH 479
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPD--------------KNVISWTSIILGLRLNN 479
N+LIDMY+KC ++ A + F + D + ++ L +
Sbjct: 480 PFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSG 539
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+ +EA F KM +P +V S+LSAC G + GK A+ I
Sbjct: 540 KLYEAKEFIEKM--PTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISI 586
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H++++K + + G+A + + K L A VF KM ++D+ WN ++ GY +
Sbjct: 363 GKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQ 422
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+EAL LY + + KP+V TF + + L+ G++ H H+I+ G ++
Sbjct: 423 QLENEEALKLYTEL-QISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPF 481
Query: 234 VVNALITMYVKCGDLVRARLVF----------DGMPK----RDRISWNAMISGYFENGEY 279
N+LI MY KCG L AR F + MPK + ++S +G+
Sbjct: 482 TTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKL 541
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + ++ +P+ + S++SA + G+ +LG+ I + +D S L
Sbjct: 542 YEAKEF---IEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSY-TLL 597
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVV 365
+Y S G + +KV RM+ VV
Sbjct: 598 SNIYASKGMWVDVKKVRERMDIAGVV 623
>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
Length = 934
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 266/503 (52%), Gaps = 9/503 (1%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
D V+L+R C + G +H+ ++++ + +GN + M++K G L A VF +
Sbjct: 6 DRFVDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQ 65
Query: 156 MCDR---DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
+ + +L +W LI YA+ G A+ L+Q+M + G PD T + CG +
Sbjct: 66 LLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQM-QLEGNSPDRITLVTIFEACGNPEN 124
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK++H + +DV + ++LITMY KCG L A L+F M + + ++WN+++
Sbjct: 125 LEDGKKIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGA 181
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ ++ + + L+ M + P T +V++A + + G+ VH + + G DD
Sbjct: 182 FIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDD 241
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V L+ MY G+ E +VF RM DV+ W+ +IS + ++++ ++ M+
Sbjct: 242 VVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQL 301
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG+ P+ +T+ SVLSAC L+ G +H+ + G +I+ N ++ MY KC ++
Sbjct: 302 EGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLED 361
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +VFH++P ++V++ ++ + S AL FR M+ ++ +++T +S L AC+
Sbjct: 362 AWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSG 421
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
L G+ HA L G+ D F+ NAL++MY +CG+++ A + F E+DV WN +
Sbjct: 422 TSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAM 481
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+ Y + + FR M+ S
Sbjct: 482 ILAYVQNEEERSGLLVFRHMMQS 504
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 265/529 (50%), Gaps = 20/529 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E++L+ MQ + LV+++ CE + + G +H V + + +GNA
Sbjct: 290 EESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAI 349
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ K G L AW VF ++ R + + N ++G A G AL L++ M G++ D
Sbjct: 350 VSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVH-EGIEFD 408
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF L C G L G+ H ++ G E D+ V NAL+ MY KCG + A VF+
Sbjct: 409 NITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFE 468
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+P++D +WNAMI Y +N E GL++F M + PD +T + ++A +
Sbjct: 469 ELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACY---HPRF 525
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI----- 371
R+VH + + G S+ V V N L+ MY FG EEG +VF +++ + + SW MI
Sbjct: 526 LRDVHSLISETGISNTV-VQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQ 584
Query: 372 SCYEGSVLP-------DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQ 423
+C+ + +A++ + M+ G PD+ + +V+ A + +G + I L
Sbjct: 585 TCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRA 644
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ + + + I N LI MY +C KA ++F + +++ ++W +++ +
Sbjct: 645 VIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRD 704
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
++ FR+M+ P+ VT++++L+ CA + AL GK I ++ + + NA+L+
Sbjct: 705 SIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICVWLDHTPLSANQMIGNAILN 764
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG A F+ + RD +WN L+ Y +G A + F+ M
Sbjct: 765 MYAKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAM 813
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 237/497 (47%), Gaps = 28/497 (5%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H +++ V + A ++M+ K G + A VF +M D+ W+ +I +
Sbjct: 226 GKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVN 285
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
++E+L L+++M + G +P+ T VL C G L+ GK +H V+ GYE D+
Sbjct: 286 CAEYEESLRLFRKM-QLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLI 344
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NA+++MY KCG L A VF +P+R ++ N M+ G+ L LF M
Sbjct: 345 VGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEG 404
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ D +T S + A G H +++ G D+ V N L+ MY G E E
Sbjct: 405 IEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAE 464
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF + +DV +W MI Y + + ++ M G PDE+T A L+AC
Sbjct: 465 HVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPR 524
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS------ 467
L +H L TG IS ++ N L+ MY + +++ +VF ++ +++ S
Sbjct: 525 FLR---DVHSLISETG-ISNTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIA 580
Query: 468 ------WTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE 520
W S+I + R EAL +F+R + P+ + V+++ A + +G M E
Sbjct: 581 SCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVG--MTEPE 638
Query: 521 IHAHALRIGVA----FDGF-LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
I LR +A DG + NAL+ MY RCG A + F+S ERD WN +++
Sbjct: 639 I--DWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVS 696
Query: 575 AERGQGALAEEFFRKMI 591
+ G + + FR+M+
Sbjct: 697 EQLEHGRDSIQLFRQML 713
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 213/466 (45%), Gaps = 19/466 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N + + G ALK M I D ++ + C G G + H+ + +
Sbjct: 378 NGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLE 437
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + NA ++M+ K G + A +VF ++ ++D+ +WN +I Y + L +
Sbjct: 438 CGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLV 497
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M G KPD TF L C P R +VH + G V V NAL+ MY
Sbjct: 498 FRHMM-QSGYKPDEVTFAITLNACYH-PRFLR--DVHSLISETGISNTV-VQNALVVMYG 552
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMIS------------GYFENGEYMKGLMLFIMMRE 291
+ G L VF+ + + SWN MI+ + ++G + L +F M++
Sbjct: 553 RFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQ 612
Query: 292 VLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD + +V+ A VG E + + D V + N LI MY G+
Sbjct: 613 AGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFG 672
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +F M +D V+W TM+S E +++ ++ M EG+ PD++TI +VL+ CA
Sbjct: 673 KARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCA 732
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L L G + T L + +I N +++MY+KC D+A +F + ++ +SW +
Sbjct: 733 SLPALQEGKAICVWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNA 792
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
+I +R A F+ M L P++VT +ILS C+ G L
Sbjct: 793 LIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLL 838
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 196/390 (50%), Gaps = 37/390 (9%)
Query: 117 LHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG------ 169
+HS++S+T +S+ V+ NA + M+ +FG L + VF K+ + SWNV+I
Sbjct: 529 VHSLISETGISNTVVQ--NALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTC 586
Query: 170 ------GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV----PDLKRGKEV 219
+ ++G EAL ++ RM GV PD +F V++ V P++ + V
Sbjct: 587 WNSVIFAHVQSGRDSEALKMFWRM-QQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAV 645
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM--ISGYFENG 277
+ E V + NALI+MY +CG +AR +FD M +RD ++WN M +S E+G
Sbjct: 646 ---IANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHG 702
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ LF M + PD +T+ +V++ + + G+ + ++ S + + N
Sbjct: 703 R--DSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICVWLDHTPLSANQMIGN 760
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
++ MY G+R+E ++FS M+ +D VSW +I Y A + +Q M+ EGS P
Sbjct: 761 AILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTP 820
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-----LIDMYSKCKCIDK 452
D +T ++LS C+ G L +K + MR Y + A T ++D+ + + +
Sbjct: 821 DAVTFTTILSVCSHGGLLGEAVKWFRW-MRE---DYYVEAETGHYGCIVDLLGRLGRVPE 876
Query: 453 ALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
A EV ++P + I WT+++ +++ +
Sbjct: 877 AEEVAEKMPAGTDPIVWTTLLSACQVHGET 906
>gi|297800206|ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 616
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 256/486 (52%), Gaps = 8/486 (1%)
Query: 99 VNLVRLCEWKRGYDEGLYL----HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
V+ L EW + + G+ L H++ K + GN +S V+ GDL +A VF
Sbjct: 83 VDYALLAEWLQSSN-GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFD 141
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
M DR+ +W +I GY K G DEA SL++ G + F C+L C + +
Sbjct: 142 SMPDRNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFE 201
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G++VH ++++ G ++ V ++L+ Y +CG+L A FD M ++D ISW A+IS
Sbjct: 202 LGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
G K + +FI M P+ T+ S++ A + GR+VH V+K DV
Sbjct: 261 RKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVF 320
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ MY G + KVF M +++ V+WT++I+ + ++A+ +++M+
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVMKRRH 380
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ + +T+ S+L AC +G L LG +LH ++ + + I +TL+ +Y KC A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
V Q+P ++V+SWT++I G EAL F ++M+ ++PN T S L ACA
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+L+ G+ IH+ A + + F+ +AL+ MY +CG + A+ F+S E+++ +W ++
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 573 GYAERG 578
GYA G
Sbjct: 561 GYARNG 566
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 222/422 (52%), Gaps = 5/422 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
+E V L+ LC + ++ G +H ++V + +L V ++ + + + G+L A
Sbjct: 182 TNERMFVCLLNLCSRRSEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQCGELTSALR 239
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F M ++D+ SW +I ++ G ++A+ ++ M G P+ +T +L+ C
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGML-NHGFLPNEFTVCSILKACSEEK 298
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G++VH V++ + DV V +L+ MY KCG++ R VFDGM R+ ++W ++I+
Sbjct: 299 AIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIA 358
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
+ G + + LF +M+ + + +T+ S++ A VG LG+E+H +IK
Sbjct: 359 AHAREGFGEEAISLFRVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V + + L+ +Y G + V ++ S+DVVSWT MIS +A++ + M
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG P+ T +S L ACA +L +G +H +A + +S + + + LI MY+KC +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACA 510
+A VF +P+KN++SW ++I+G N EAL + +R + + +ILS C
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Query: 511 RI 512
I
Sbjct: 599 DI 600
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 205/387 (52%), Gaps = 22/387 (5%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H ++ + + N LI+ V+ GDLV AR VFD MP R+ ++W AMI GY +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYLKF 161
Query: 277 G----------EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
G +Y+K + F R + + L S S EL GR+VHG ++K
Sbjct: 162 GLEDEAFSLFEDYVKHGIRFTNERMFVC---LLNLCSRRSEFEL------GRQVHGNMVK 212
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
+G + + V + L+ Y G + F ME KDV+SWT +IS +KA+
Sbjct: 213 VGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFM 271
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M G +P+E T+ S+L AC+ + G ++H L ++ + + + + +L+DMY+K
Sbjct: 272 FIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAK 331
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSI 505
C I +VF + ++N ++WTSII EA+ FR M +L N++T+VSI
Sbjct: 332 CGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVMKRRHLIANNLTVVSI 391
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
L AC +GAL+ GKE+HA ++ + + ++ + L+ +Y +CG + A+N RDV
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV 451
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
+W +++G + G + A +F ++MI
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMI 478
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII---LGLR 476
++H +A++ I N LI + + A +VF +PD+N ++WT++I L
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYLKFG 162
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
L + +F + K + N V +L+ C+R G+++H + +++GV + +
Sbjct: 163 LEDEAFSLFEDYVKHGIRF-TNERMFVCLLNLCSRRSEFELGRQVHGNMVKVGVG-NLIV 220
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++L+ Y +CG + A F+ E+DV +W +++ + +G G A F M++
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGMLN 277
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 237/460 (51%), Gaps = 7/460 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + LS+ + G L +F +M R + +W +I Y + G+ EAL LY M
Sbjct: 338 LQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---- 393
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
++PD VL+ C + +L++G+ VH + +E + V L+ MYVKCGDL A
Sbjct: 394 DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEA 453
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R FDG RD ISW ++I+ Y + L +F M V+P+ +T +VI A +
Sbjct: 454 RRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRL 513
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GR +H V+ G D V N L+ MY FG + VF + K SW M+
Sbjct: 514 SSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVML 573
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A+E Y + EG P ++ L +C L ++ +H + +
Sbjct: 574 VALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFY 633
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++++N L+++Y+KC +++A VF Q+ +KN +SWT++I G N R EAL ++ M
Sbjct: 634 PDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM 693
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+++PN + V ++S+CA +GAL+ G+ +HA G+ + + AL++MY +CG++
Sbjct: 694 --DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLG 751
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+S D AWN + T YA+ G G+ E +R+M
Sbjct: 752 LAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREM 791
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 255/497 (51%), Gaps = 25/497 (5%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C + + G +H + ++++ + L NA L+++ K GDL + +F M R + +W
Sbjct: 9 CAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATW 68
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N +I Y + FF EAL ++RM P TF VL C DL+ GK +H +
Sbjct: 69 NTMITAYVQHDFFQEALEAFRRM----DAPPSSITFTSVLGACCSPDDLETGKAIHRQIG 124
Query: 225 RFGYEADVDVV--NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ D + N+L+TMY KCG L A VF G+ +++ SW AMI+ Y +NG +
Sbjct: 125 ASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRA 184
Query: 283 LMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ +F MM E V+PD +T + V++A +GD + G +H + G + V LI
Sbjct: 185 IEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGV-ESAMVSTGLID 243
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISC--YEGSVLPDKAVETYQMMEAEGSMPDE 399
+Y +G E+ +VF + +DVV WT I+ Y G A+E ++ MEAEG +
Sbjct: 244 LYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQ--SGFALELFRKMEAEGLQANN 301
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T + +L+AC+ L + + G + GL ++ + ++ ++++C + E+F +
Sbjct: 302 VTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDR 361
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
+P + V++WT++I S EAL + M +++P+ + L ++L AC+R+ L G+
Sbjct: 362 MPHRTVVTWTTMIAAYNQRGYSMEALELYHCM--DIEPDDIALSNVLQACSRLKNLEQGR 419
Query: 520 EIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
+H+ +A F P+ L+DMYV+CG + A F+ RDV +W L+T
Sbjct: 420 AVHSR-----IASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITA 474
Query: 574 YAERGQGALAEEFFRKM 590
Y+ G A E F M
Sbjct: 475 YSHENFGREALEVFHSM 491
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 211/397 (53%), Gaps = 9/397 (2%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF CVL C G+ D++RGK+VH + D + NAL+ +Y KCGDL +R +F+ M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+R +WN MI+ Y ++ + + L F R + P +T +SV+ A D + G+
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAF---RRMDAPPSSITFTSVLGACCSPDDLETGK 117
Query: 319 EVHGYVIKMG--FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+H + D + N L+ MY G+ E+ E+VF + K+ SWT MI+ Y
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 377 SVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ +A+E + M +EG + PD IT A VL+AC+ LG+L+ G+++H L +R+ + +
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHAL-IRSKGVESAM 236
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
++ LID+Y K + AL+VF + D++V+ WT+ I + +S AL FRKM
Sbjct: 237 VSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEG 296
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
L+ N+VT IL+AC+ + GK I +G+ +D L + +L ++ RCG +
Sbjct: 297 LQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 356
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ R V W ++ Y +RG A E + M
Sbjct: 357 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM 393
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 235/461 (50%), Gaps = 6/461 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ ++M+ K G L A VF + ++ FSW +I YA+ G+ A+ ++ M G
Sbjct: 136 LQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEG 195
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+PD T+ VL C + DL+ G +H + G E+ + V LI +Y K G A
Sbjct: 196 RVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAM-VSTGLIDLYGKWGFFEDA 254
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ + RD + W A I+ +G+ L LF M + + +T S +++A +
Sbjct: 255 LQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNL 314
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D + G+ + + +G D + + ++ ++ G+ ++F RM + VV+WTTMI
Sbjct: 315 EDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMI 374
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y +A+E Y M+ E PD+I +++VL AC+ L NL+ G +H
Sbjct: 375 AAYNQRGYSMEALELYHCMDIE---PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFE 431
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ L+DMY KC + +A F ++VISWTS+I N EAL F M
Sbjct: 432 PSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSM 491
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L ++PNS+T +++ AC+R+ +L+ G+ +H+ + G D F+ NAL+ MY + GR+
Sbjct: 492 ELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRV 551
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+S + +W ++L + G A E + ++
Sbjct: 552 DFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRI 592
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 237/481 (49%), Gaps = 14/481 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+++ L+ ++I D+ AL N+++ C + ++G +HS ++ S+ + +
Sbjct: 383 SMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVD 442
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+VK GDL A F RD+ SW LI Y+ F EAL ++ M + GV+P+
Sbjct: 443 MYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSM-ELEGVEPNSI 501
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF V+ C + L G+ +H V+ G+ +D V NAL++MY K G + AR+VFD +
Sbjct: 502 TFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSI 561
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P + SW M+ +NG + L ++ + P S+ + + + D R
Sbjct: 562 PVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRAR 621
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+HG + F D+ + N L+ +Y G EE VF +M K+ VSWTTMI Y +
Sbjct: 622 AIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNG 681
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
P +A+E Y+ M+ + P+ I V+S+CA LG L G ++H GL + +I
Sbjct: 682 RPAEALELYKAMDVQ---PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 738
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L++MY+KC + A E F + +W S+ + L +R+M L ++P
Sbjct: 739 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 798
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKP 552
N +TL+S+L AC+ +G L E H VA G P + + D+ R GR++
Sbjct: 799 NGITLLSVLVACSHMGML----EECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEE 854
Query: 553 A 553
A
Sbjct: 855 A 855
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 164/340 (48%), Gaps = 6/340 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAF 136
+AL+ SM+ + + ++ C G LHS V T H+S +GNA
Sbjct: 483 EALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVAT-GHISDEFVGNAL 541
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ KFG + A VF + + SW V++ + G EAL +Y R+ + G +P
Sbjct: 542 VSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIH-LEGFRPG 600
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
F L +C + D+ R + +H + + D+ + N L+ +Y KCG+L ARLVFD
Sbjct: 601 SPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFD 660
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +++ +SW MI GY +NG + L L+ M V P+F+ VIS+ +G
Sbjct: 661 QMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGALVE 717
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ VH + G ++ + L+ MY G + F D +W +M + Y
Sbjct: 718 GQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQ 777
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ +E Y+ M +G P+ IT+ SVL AC+ +G L+
Sbjct: 778 FGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLE 817
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H V+ + + + L N ++++ K G+L A VF +M +++ SW +IGGYA+ G
Sbjct: 623 IHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGR 682
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL LY+ M V+P+ F V+ +C + L G+ VH + G + + +V
Sbjct: 683 PAEALELYKAM----DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 738
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG L AR FD D +WN+M + Y + G + L L+ M V P
Sbjct: 739 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 798
Query: 297 DFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
+ +TL SV+ A +G E+ V G + + + + G EE EKV
Sbjct: 799 NGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKV 858
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T A VLSACA L +++ G K+H+ + ++ N L+++Y+KC ++++ +F +
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE 520
+ V +W ++I ++ EAL FR+M + P+S+T S+L AC L GK
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRM--DAPPSSITFTSVLGACCSPDDLETGKA 118
Query: 521 IHAH--ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAER 577
IH A + D L N+L+ MY +CG ++ A F+ R + +W ++T YA+
Sbjct: 119 IHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQN 178
Query: 578 GQGALAEEFFRKMI 591
G A E F M+
Sbjct: 179 GYERRAIEVFGDMM 192
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 277/531 (52%), Gaps = 5/531 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVS 122
N+ ++ + G + +++ M +L I + +LV C + EG+ +H V+
Sbjct: 10 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 69
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ V + A L ++ +G + + VF +M DR++ SW L+ GY+ G +E +
Sbjct: 70 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVID 129
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Y+ M GV + + V+ +CG + D G+++ V++ G E+ + V N+LI+M
Sbjct: 130 IYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
G++ A +FD M +RD ISWN++ + Y +NG + +F +MR + + T+S
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+++S V +K GR +HG V+KMGF V VCN L++MY G E VF +M +K
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D++SW ++++ + A+ M + G + +T S L+AC + G LH
Sbjct: 309 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 368
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
L + +GL II N L+ MY K + ++ V Q+P ++V++W ++I G +
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 428
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNAL 540
+AL F+ M + + N +T+VS+LSAC G L+ GK +HA+ + G D + N+L
Sbjct: 429 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL 488
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ MY +CG + + + FN + R++ WN +L A G G + KM
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 251/508 (49%), Gaps = 4/508 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ + M+ + +E+++ ++ C + G + V K+ + +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +SM G++ +A Y+F +M +RD SWN + YA+ G +E+ ++ M
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD- 240
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ + T +L G V K G+ +H V++ G+++ V V N L+ MY G V A L
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP +D ISWN++++ + +G + L L M +++T +S ++A
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ GR +HG V+ G + + N L+ MY G E +V +M +DVV+W +I
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGLIS 432
Y PDKA+ +Q M EG + IT+ SVLSAC G+ L+ G LH + G S
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ N+LI MY+KC + + ++F+ + ++N+I+W +++ + E L KM
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + + LSA A++ L G+++H A+++G D F+ NA DMY +CG +
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERG 578
S R + +WNIL++ G
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHG 628
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 220/421 (52%), Gaps = 4/421 (0%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GK 217
R+ SWN ++ G + G + E + +++M +G +KP + ++ CG + R G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFREGV 62
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+VH V + G +DV V A++ +Y G + +R VF+ MP R+ +SW +++ GY + G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
E + + ++ MR V + ++S VIS+ L+ DE LGR++ G V+K G ++V N
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI M S GN + +F +M +D +SW ++ + Y + +++ + +M
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T++++LS + + G +H L ++ G S + + NTL+ MY+ +A VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALM 516
Q+P K++ISW S++ + RS +AL M+ + K N VT S L+AC
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGYA 575
G+ +H + G+ ++ + NAL+ MY + G M + RDV AWN L+ GYA
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 576 E 576
E
Sbjct: 423 E 423
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 15/458 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYL 117
NS NG +E++ + M+ + V+ + L+ + +W RG +
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG------I 266
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H +V K V + N L M+ G A VF +M +DL SWN L+ + G
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL L M G + TF L C ++G+ +H V+ G + + NA
Sbjct: 327 LDALGLLCSMI-SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L++MY K G++ +R V MP+RD ++WNA+I GY E+ + K L F MR V +
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 298 FMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++T+ SV+SA L GD + G+ +H Y++ GF D V N LI MY G+ + +F
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++++++++W M++ ++ ++ M + G D+ + + LSA A L L+
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +LH LA++ G I N DMYSKC I + +++ ++++ SW +I L
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 625
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+ E F +M+ + +KP VT VS+L+AC+ G
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 209/418 (50%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G AL L SM V+ + + C +++G LH +V
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 373
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +GNA +SM+ K G++ + V +M RD+ +WN LIGGYA+ D+AL+
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Q M V GV + T VL C DL +RGK +H +++ G+E+D V N+LITMY
Sbjct: 434 FQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 492
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL ++ +F+G+ R+ I+WNAM++ +G + L L MR V D + S
Sbjct: 493 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 552
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+SA+ + + G+++HG +K+GF D + N MY G E K+ ++
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 612
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+ SW +IS ++ T+ M G P +T S+L+AC+ G +D G+ +
Sbjct: 613 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 672
Query: 423 QLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ R GL I +ID+ + + +A ++P K N + W S++ +++
Sbjct: 673 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 730
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 7/341 (2%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KL 316
MP R+ +SWN M+SG G Y++G+ F M ++ + P ++S+++A G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +VHG+V K G DV V ++ +Y +G KVF M ++VVSWT+++ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P++ ++ Y+ M EG +E +++ V+S+C L + LG ++ +++GL S + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNL 495
N+LI M +D A +F Q+ +++ ISW SI N E+ F M +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPA 553
+ NS T+ ++LS + G+ IH +++G FD + N LL MY GR A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG--FDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F +D+ +WN L+ + G+ A MI S
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 339
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 248/482 (51%), Gaps = 35/482 (7%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
DL + + + + FSWNV I G+ + EA+ LY+R+ G KPD YT+P +
Sbjct: 55 DLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 114
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ C + ++ G E+ HV+ G+++D+ V NA+I + V CGDL AR +FD RD +
Sbjct: 115 KACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 174
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SWN+MI+GY G + L + M+ + PD +T+ V+S+ + D LGRE H Y+
Sbjct: 175 SWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYI 234
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL----- 379
+ G V + N L+ MY+ GN E K+F M +K +VSWTTM+ Y S L
Sbjct: 235 EENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAW 294
Query: 380 ------PDK--------------------AVETYQMMEAEGSMPDEITIASVLSACACLG 413
PDK A+ + M+A PDE+T+ S LSAC+ LG
Sbjct: 295 KLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLG 354
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD+GI +H + L + + LIDMY+KC I KA++VF ++P +N ++WT+II
Sbjct: 355 ALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIIS 414
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVA 531
GL L+ + A+ +F +M+ N + P+ VT + +LSAC G + G++ + + + ++
Sbjct: 415 GLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLS 474
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ ++D+ R G ++ A S E D W L G + E K
Sbjct: 475 PKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASK 534
Query: 590 MI 591
++
Sbjct: 535 LL 536
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 195/385 (50%), Gaps = 42/385 (10%)
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVL----VDPDFMTLSSVISASELVGDEKLG 317
+ SWN I G+ ++ + ++L+ + VL PD T + A + ++G
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLY---KRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
E+ G+V+ +GF D+ V N +I + +S G+ + K+F + +D+VSW +MI+ Y
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A+ Y+ M+ EG PDE+T+ V+S+CA L +LDLG + H GL + +A
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246
Query: 438 NTLIDMYSKCK-------------------------------CIDKALEVFHQIPDKNVI 466
N L+DMY KC +D A ++F ++PDK+V+
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVV 306
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
W ++I G NR EAL F +M +N+ P+ VT+VS LSAC+++GAL G IH +
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
+ ++ + L AL+DMY +CG++ A F R+ W +++G A G A
Sbjct: 367 EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAI 426
Query: 585 EFFRKMIDSK--GNWRKLMGLFRKC 607
+F +MID+ + +GL C
Sbjct: 427 AYFSEMIDNSVMPDEVTFLGLLSAC 451
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 34/382 (8%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA + + V GDL A +F K C RDL SWN +I GY + G+ EAL+ Y+ M
Sbjct: 142 IFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMK- 200
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V G+KPD T V+ +C + DL G+E H ++ G + V + NAL+ MY+KCG+L
Sbjct: 201 VEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLE 260
Query: 250 RARLVFDG-------------------------------MPKRDRISWNAMISGYFENGE 278
AR +FD MP +D + WNAMI GY
Sbjct: 261 SARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANR 320
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L LF M+ + ++PD +T+ S +SA +G +G +H Y+ K S +V++
Sbjct: 321 GKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTA 380
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI MY G + +VF + ++ ++WT +IS A+ + M MPD
Sbjct: 381 LIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPD 440
Query: 399 EITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
E+T +LSAC G ++ G K Q++ + L + + ++D+ + +++A E+
Sbjct: 441 EVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELI 500
Query: 458 HQIP-DKNVISWTSIILGLRLN 478
+P + + + W ++ R++
Sbjct: 501 KSMPIEADAVVWGALFFACRIH 522
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 172/414 (41%), Gaps = 78/414 (18%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N G +AL + M+ I DE ++ +V C D G H + +
Sbjct: 177 NSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 236
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L+V L NA + M++K G+L A +F M ++ + SW ++ GYA++G D A L
Sbjct: 237 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKL 296
Query: 184 YQRM------FW---VGG---------------------VKPDVYTFPCVLRTCGGVPDL 213
+ M W +GG + PD T L C + L
Sbjct: 297 FDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGAL 356
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G +H ++ + +V + ALI MY KCG + +A VF +P R+ ++W A+ISG
Sbjct: 357 DVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGL 416
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+G + F M + V PD +T ++SA HG ++
Sbjct: 417 ALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC-----------CHGGLV-------- 457
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETYQ 388
EEG K FS+M SK +S ++ M+ + L ++A E +
Sbjct: 458 ----------------EEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIK 501
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLG----IKLHQLAMRTGLISYIIIAN 438
M E D + ++ AC GN+ +G KL Q+ I Y+++AN
Sbjct: 502 SMPIEA---DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGI-YVLLAN 551
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 238/460 (51%), Gaps = 4/460 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +S + G+L A +F + ++ +W+ L+ GY K G E L + +M W G
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQ 130
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP YT VLR C + L GK +H + I+ EA++ V L+ MY KC L+ A
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190
Query: 254 VFDGMPKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P R + + W AM++GY +NGE +K + F MR ++ + T S+++A +
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR+VHG +I GF +V V + L+ MY G+ + ME DVV W +MI
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
++A+ + M D+ T SVL + A NL +G +H L ++TG +
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
++N L+DMY+K + AL+VF++I DK+VISWTS++ G N +AL F M
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMR 430
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + + + SACA + + G+++HA+ ++ N+L+ MY +CG ++
Sbjct: 431 TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+S E R+V +W ++ GYA+ G + +F M
Sbjct: 491 DAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESM 530
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 224/455 (49%), Gaps = 4/455 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S ++ C NG + L+ M + L +++R C G +H K
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
++ + + M+ K L A Y+F + DR + W ++ GYA+ G +A+
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G++ + +TFP +L C + G++VH +I G+ +V V +AL+ MY
Sbjct: 223 CFKEM-RNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMY 281
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL AR++ D M D + WN+MI G +G + L+LF M + D T
Sbjct: 282 AKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYP 341
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV+ + + K+G VH IK GF +V N L+ MY GN VF+++ K
Sbjct: 342 SVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DV+SWT++++ Y + +KA++ + M D+ +A V SACA L ++ G ++H
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++ S + N+LI MY+KC C++ A+ VF + +NVISWT+II+G N
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVE 521
Query: 483 EALIFFRKM--MLNLKPNSVTLVSILSACARIGAL 515
+F M + +KP S ++ R G +
Sbjct: 522 TGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKI 556
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 185/397 (46%), Gaps = 35/397 (8%)
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI----------------- 270
Y +++D N L++ K G + AR +FD MP RD+ +WN MI
Sbjct: 34 YSSNLDS-NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFN 92
Query: 271 --------------SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
SGY +NG ++GL F M P TL SV+ A +
Sbjct: 93 ETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHT 152
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV-FSRMESKDVVSWTTMISCYE 375
G+ +H Y IK+ ++ V L+ MY E E + FS + K+ V WT M++ Y
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ KA++ ++ M +G + T S+L+AC + G ++H + +G +
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVY 272
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ + L+DMY+KC + A + + +V+ W S+I+G + EAL+ F KM +
Sbjct: 273 VQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRD 332
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ + T S+L + A L G+ +H+ ++ G + NAL+DMY + G + A
Sbjct: 333 IRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ FN ++DV +W L+TGY G A + F M
Sbjct: 393 DVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 165/384 (42%), Gaps = 51/384 (13%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G +E+AL M +I +D+ ++++ + G +HS+ K
Sbjct: 306 NSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIK 365
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + NA + M+ K G+L A VF K+ D+D+ SW L+ GY GF ++AL L
Sbjct: 366 TGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQL 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V D + CV C + ++ G++VH + I+ + + N+LITMY
Sbjct: 426 FCDM-RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---------- 293
KCG L A VFD M R+ ISW A+I GY +NG G F M +V
Sbjct: 485 KCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYA 544
Query: 294 -----------------------VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
V+PD S++SA + G+ +LG +IK+ S
Sbjct: 545 CMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPS 604
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV-----VSWTTMISCYEGSVLPDK--- 382
+ + L M+ G E+ + M++ + SW M S + D+
Sbjct: 605 NSLPYV-LLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHP 663
Query: 383 -AVETYQ-------MMEAEGSMPD 398
A E Y +++ G +PD
Sbjct: 664 LAAEIYSKIDEMMILIKEAGHVPD 687
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 284/545 (52%), Gaps = 17/545 (3%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD-----EGLYLHSVVSKTMS 126
+N S++Q L +S L +E ++V V+ R D E + + + K+
Sbjct: 26 MNISMKQKLGRANSWAGLE-ASNEVSVVLWVKFAVGTRALDANTKIEANQIQTHLRKSGF 84
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ V L AFL + K G + +A ++F +M RD+ SWN LI GY++ G+ +AL ++ +
Sbjct: 85 NQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQ 144
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G P T ++ +CG + +GK +H I+ G + D V NAL +MY KC
Sbjct: 145 ML-REGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCA 203
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
DL A ++F+ + ++ +SWN MI Y +NG + + +++F M++ V+ +++T+ S++S
Sbjct: 204 DLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLS 263
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A+ + H YVIK GF+ D SV L+ Y GN E +++ M +++VS
Sbjct: 264 ANAHL------DSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVS 317
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
T MIS Y VE + M PD + + S+L + G+ +H +
Sbjct: 318 LTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGL 377
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+TGL + ++ N LI MYSK I+ +F ++ +K +ISW S+I R+ +A+
Sbjct: 378 KTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAME 437
Query: 487 FFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F +M M P+++T+ S+L+ C+ +G L G+ +H + LR + + FL AL+DMY+
Sbjct: 438 LFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYI 497
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMG 602
+CGR++ A F S E ++ WN +++GY G A + +M + K + +G
Sbjct: 498 KCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLG 557
Query: 603 LFRKC 607
+ C
Sbjct: 558 VLSAC 562
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 244/505 (48%), Gaps = 19/505 (3%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
+ LV LV C +G +H K+ L R+ NA SM+ K DL A +F
Sbjct: 154 QRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFE 213
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
++ ++ SWN +IG Y + G FDEA+ ++++M V+ + T +L +
Sbjct: 214 EIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQM-QKERVEVNYVTIISLLSANAHL---- 268
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
H +VI+ G+ D V+ +L+ Y CG++ A L+++ MP+R+ +S AMISGY
Sbjct: 269 --DSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYA 326
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYVIKMGFSD 331
E G + F M ++ + PD + + S++ +G G +H Y +K G
Sbjct: 327 EKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGS---GLGIHAYGLKTGLCA 383
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMM 390
D V N LI MY FG+ E +FS M K ++SW ++IS C + D A+E + M
Sbjct: 384 DCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSD-AMELFCQM 442
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
G PD ITIAS+L+ C+ +G L G +LH +R L + L+DMY KC +
Sbjct: 443 RMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRL 502
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSAC 509
+ A VF I + + +W ++I G L+ AL + +M LKP+ +T + +LSAC
Sbjct: 503 ESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSAC 562
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNA-LLDMYVRCGRMKPA--WNQFNSNERDVSA 566
G + GK G NA ++D+ R G ++ A + + E D +
Sbjct: 563 THGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAI 622
Query: 567 WNILLTGYAERGQGALAEEFFRKMI 591
W LLT + L E ++++
Sbjct: 623 WGALLTSCCIHQELKLGECLAKRLL 647
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 182/393 (46%), Gaps = 10/393 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++A+ MQ+ + V+ V ++ L D H V K
Sbjct: 224 NTMIGAYGQNGLFDEAMLVFKQMQKERVEVN---YVTIISLLSANAHLDS---THCYVIK 277
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + + + + G++ A ++ M R+L S +I GYA+ G +
Sbjct: 278 TGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVEC 337
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + +KPD +L + G +H + ++ G AD VVN LI+MY
Sbjct: 338 FTQMLQLK-MKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYS 396
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +F M ++ ISWN++IS + G + LF MR PD +T++S
Sbjct: 397 KFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIAS 456
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+++ VG + G +H YV++ + + L+ MY+ G E E+VF ++
Sbjct: 457 LLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPC 516
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ +W TMIS Y S +A+ Y M+ +G PD IT VLSAC G L K +
Sbjct: 517 LATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACT-HGGLVWEGKRYF 575
Query: 424 LAMRT--GLISYIIIANTLIDMYSKCKCIDKAL 454
+MR G+I + ++D+ S+ +++A+
Sbjct: 576 RSMREDFGMIPGLQHNACMVDLLSRAGFLEEAV 608
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 260/515 (50%), Gaps = 9/515 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ M+ + + + C +G +HS V + V + A +
Sbjct: 187 EALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G L A VF +M + SWN ++ + G EAL +QRM GG PD
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDK 306
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L C L G+ ++ +++ GY+ + V N ++TMY CG + A F
Sbjct: 307 VTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +RD ISWN +ISG+ + G + + LF M + PD T S+I + + + K+
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKIL 426
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
E+ +++ G DV + + LI M+ +GN E +F M+ +D+V WT++IS Y
Sbjct: 427 SEL---MVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQH 483
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
D A+ ++M EG M ++ T+ + L+ACA L L G +H A+ G + +
Sbjct: 484 GSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVG 543
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N LI+MY+KC C+++A VFHQ KN++SW +I ++ EAL F++M L LK
Sbjct: 544 NALINMYAKCGCLEEADLVFHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLK 602
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ V+ V++L+ C+ G +IH L G+ D + ALL+MY + A
Sbjct: 603 ADKVSFVTVLNGCSSASE---GSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ E RD+ +WN ++ G AE G A + F++M
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRM 694
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 280/524 (53%), Gaps = 15/524 (2%)
Query: 73 NGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
+G +AL Y MQ + D+ + ++ C G L+ + + +
Sbjct: 283 HGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLI 342
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN ++M+ G + +A F M +RD SWN +I G+A+AGF DEA+ L++RM
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRML-AE 401
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD +TF ++ G ++ K + ++ G E DV +V+ALI M+ + G++ A
Sbjct: 402 GITPDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREA 458
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASEL 310
R +FD M RD + W ++IS Y ++G L +MR E L+ DF ++++ + + L
Sbjct: 459 RSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASL 518
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +H + I+ GF+ +V N LI MY G EE + VF + K++VSW T+
Sbjct: 519 TALSE-GKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQC-GKNLVSWNTI 576
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y +A++ +Q M+ EG D+++ +VL+ C+ G K+H + + TG+
Sbjct: 577 AAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE---GSKIHNILLETGM 633
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I++ L++MY+ K +D+A +F ++ ++++SW ++I G + S EA+ F++
Sbjct: 634 ESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQR 693
Query: 491 MMLN-LKPNSVTLVSILSA--CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M L + P+ ++ V++L+A + +L + + G D + NA++ M+ R
Sbjct: 694 MQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRS 753
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ A F ERD ++WN+++T +A+ G+ A + FR+M
Sbjct: 754 GRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRM 797
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 255/488 (52%), Gaps = 7/488 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + L+ LC K EG ++HS V + + NA + M+ K G + A VF
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ SWN L+ +A+ G F +A ++QRM + G+ PD TF VL C DL
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRM-KLQGLAPDRITFVTVLDGCTATGDL 119
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
RGK +H V+ G E +V V +LI MY KCG + AR VFD + +D +SW +MI Y
Sbjct: 120 SRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTY 179
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++ ++ L LF MR V P+ +T ++ ISA V G+ +H V++ GF DV
Sbjct: 180 VQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV 239
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V ++ MY G+ E+ +VF RM + VSW +++ +A+ +Q M+ +
Sbjct: 240 VVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQ 299
Query: 394 -GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
GS PD++T ++L+AC+ L G L++ ++ G +++I+ N ++ MYS C ID
Sbjct: 300 GGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDN 359
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A F + +++ ISW +II G EA+ FR+M+ + P+ T +SI+ AR
Sbjct: 360 AAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR 419
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ E+ + GV D FL +AL++M+ R G ++ A + F+ +RD+ W +
Sbjct: 420 MQEAKILSELMVES---GVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSI 476
Query: 571 LTGYAERG 578
++ Y + G
Sbjct: 477 ISSYVQHG 484
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 271/529 (51%), Gaps = 6/529 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L +G +QA + M+ + D V ++ C G LH V +
Sbjct: 72 NSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLE 131
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V +G + + M+ K G + A VF K+ +D+ SW +I Y + EAL L
Sbjct: 132 AGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALEL 191
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM GV P+ T+ + C V + GK +H V+ G+E+DV V A++ MY
Sbjct: 192 FHRM-RPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYG 250
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLS 302
KCG L AR VF+ MP + +SWNA+++ ++G ++ L F M+ + PD +T
Sbjct: 251 KCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFI 310
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++++A G ++ +++ G+ + V N ++ MY S G + FS M +
Sbjct: 311 TILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D +SW T+IS + + D+AV ++ M AEG PD+ T S++ A + + L
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKI---LS 427
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+L + +G+ + + + LI+M+S+ + +A +F + D++++ WTSII + S
Sbjct: 428 ELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSD 487
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+AL R M L L N TLV+ L+ACA + AL GK IH+HA+ G A + NAL+
Sbjct: 488 DALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALI 547
Query: 542 DMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+MY +CG ++ A F+ +++ +WN + Y +R + A + F++M
Sbjct: 548 NMYAKCGCLEEADLVFHQCGKNLVSWNTIAAAYVQRDKWREALQLFQEM 596
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 213/399 (53%), Gaps = 3/399 (0%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D TF +L C + G+ VH V + D V NA I MY KCG + A VF
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ ++SWN++++ + +G++ + +F M+ + PD +T +V+ GD
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG+V++ G +V V LIKMY G E+ +VF ++ +DVVSWT+MI Y
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYV 180
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+A+E + M G +P+ IT A+ +SACA + ++ G +H + G S ++
Sbjct: 181 QHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV 240
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
++ +++MY KC ++ A EVF ++P N +SW +I+ + EAL +F++M L
Sbjct: 241 VSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQG 300
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
P+ VT ++IL+AC+ L G+ ++ L+ G + N ++ MY CGR+ A
Sbjct: 301 GSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F++ ERD +WN +++G+A+ G A FR+M+
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRML 399
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 226/449 (50%), Gaps = 17/449 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L ++ ++ L V L +A ++M ++G++ A +F M DRD+ W +I Y
Sbjct: 422 EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYV 481
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G D+AL R+ + G+ + +T L C + L GK +H H I G+ A
Sbjct: 482 QHGSSDDALGC-TRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASP 540
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NALI MY KCG L A LVF K + +SWN + + Y + ++ + L LF M+
Sbjct: 541 AVGNALINMYAKCGCLEEADLVFHQCGK-NLVSWNTIAAAYVQRDKWREALQLFQEMQLE 599
Query: 293 LVDPDFMTLSSVI----SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
+ D ++ +V+ SASE G ++H +++ G D V L+ MY + +
Sbjct: 600 GLKADKVSFVTVLNGCSSASE-------GSKIHNILLETGMESDHIVSTALLNMYTASKS 652
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+E ++FSRME +D+VSW MI+ L +A++ +Q M+ EG PD+I+ +VL+A
Sbjct: 653 LDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNA 712
Query: 409 --CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ +L + +L G + I+ N ++ M+ + + +A F +I +++
Sbjct: 713 FSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAA 772
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG-KEIHAH 524
SW I+ + +AL FR+M + +P+S+TLVS+LSAC+ G + G +
Sbjct: 773 SWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSM 832
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
G+A ++D+ R GR+ A
Sbjct: 833 GREFGIAGSQEHYGCVVDLLARAGRLDQA 861
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 262/515 (50%), Gaps = 7/515 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QAL+ MQ + D V ++ C + +G +H+ + + + NA +
Sbjct: 42 QALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALI 101
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K A+ +F +M ++ SW +IG +A+ G L R + G++P++
Sbjct: 102 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 161
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T VLR C +L G++VH +V+ G D + NAL+ MY K G + A +V
Sbjct: 162 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLRE 217
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MPKRD ISWN MISGY ++G+ +GL M++ + P +T +++++A D G
Sbjct: 218 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEG 277
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ +H V+ MG D V + L+ MY G+ E+ ++ + ++ ++W T+I Y
Sbjct: 278 KSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARY 337
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A+ ++Q M+ EG D +T +L C+ +L GI LH + G S II+
Sbjct: 338 SDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVH 396
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N+L MY+KC +D A ++F ++P +N +SW S++ + +A FF++M L +
Sbjct: 397 NSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSR 456
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ VT +S+L AC + G IH + G + NAL+ MY + G + A N
Sbjct: 457 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNV 516
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F++ ER+ +WN +L Y E+G A E F KM
Sbjct: 517 FDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM 551
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 238/457 (52%), Gaps = 12/457 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGGVKPDV 197
M+ K GDL A VFGK+ + +W+ L+G YA + +AL LY+RM + GV+PD
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRM-QLEGVRPDS 59
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF L+ C L G++VH H+ G E D+ NALI MY KC A +F
Sbjct: 60 VTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSR 119
Query: 258 MPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M + +SW ++I + + G + ++LF M + P+ +T+ +V+ A L
Sbjct: 120 MESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTD---- 175
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR+VHGYV++ G S D S+ N L+ MY G +E + V M +DV+SW MIS Y
Sbjct: 176 GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQ 235
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
S + + M+ +G P ++T A++L+AC+ +L G +H+ + GL ++
Sbjct: 236 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVV 295
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ L+ MY KC ++ ++ ++N I+W +II + F+AL F++M L +
Sbjct: 296 KSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGV 355
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL-PNALLDMYVRCGRMKPAW 554
K ++VT V +L C+ L G +H ++G F+ + N+L MY +CG + A
Sbjct: 356 KADAVTFVLMLGTCSSPAHLAQGILLHDWISQLG--FESIIVHNSLTAMYAKCGSLDAAR 413
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F R+ +WN L++ + G A A +FF++M
Sbjct: 414 KMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRM 450
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 250/522 (47%), Gaps = 19/522 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVR 131
+G ++ L+ L MQ+ + + L+ C + EG +H SVV + V
Sbjct: 236 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEV- 294
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ + L M+ K G L ++ +R+ +WN +IG YA+ +AL +Q+M +
Sbjct: 295 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQM-QLE 353
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVK D TF +L TC L +G +H + + G+E+ + V N+L MY KCG L A
Sbjct: 354 GVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESII-VHNSLTAMYAKCGSLDAA 412
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F+ MP R+ +SWN+++S ++G + F M+ PD +T S++ A
Sbjct: 413 RKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQ 472
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ K G +H V++ GF V N LI MY G+ E VF M ++ VSW T++
Sbjct: 473 ANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTIL 532
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGL 430
+ Y L AVE + M+ D++T + L AC+ L G L G +H + G
Sbjct: 533 AAYVEKGLNRDAVEMFWKMDVA---RDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGF 589
Query: 431 ISYI--IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ + + A L++MY KC + +A ++F + ++V++WTS+I+ ++ +AL
Sbjct: 590 SNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLV 649
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL-RIGVAFDGFLPNALLDMYVR 546
+ M +K + V +SILS C G L G + + G++ N ++D+ R
Sbjct: 650 KIMEQEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGR 709
Query: 547 CGRMKPAWNQFN--SNERDVSAWNILLT-----GYAERGQGA 581
G + A + + D W LL G ERG+ A
Sbjct: 710 AGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRA 751
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 282/563 (50%), Gaps = 49/563 (8%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALV---NLVRLCEWKRGYDEGLYLHSVVSK 123
LNEL EQA K LD + + V ALV + V + K+ L+ H VVS
Sbjct: 286 LNELGRFSDAEQARKLLDERKIVK--VPGLALVVTRSFVMMEAVKK-----LHAHLVVS- 337
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + S ++ DL A VF ++ F WN L+ G A++ +A+
Sbjct: 338 GLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVF 397
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y++ G+KPD TFP VL+ C K G+++H HVI+ G+ D+ V N+LI +Y
Sbjct: 398 YKKA-QEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYA 456
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CGDLV AR +FD M +D +SWN++I GY + + + L LF +M+ V D +T+
Sbjct: 457 ACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVK 516
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--- 360
VISA +GD + + Y+ + DV + N LI Y G + EKVFS+M+
Sbjct: 517 VISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKN 576
Query: 361 ----------------------------SKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+KD++SW++MI Y + ++E ++ M+
Sbjct: 577 TVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQR 636
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD + IASVLSACA LG LDLG +H R + + I+ N+LIDM++KC C+ +
Sbjct: 637 AKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQE 696
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACAR 511
AL+VF ++ +K+ +SW SIILGL N EAL IF+ + +PN VT + +L ACA
Sbjct: 697 ALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACAN 756
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAW 567
+ G + H ++ + + + ++ + R G+++ A N N D W
Sbjct: 757 KRLVQEGLD-HFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVW 815
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
ILL G A+AE +K+
Sbjct: 816 RILLGACKTHGNVAVAEVATKKL 838
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 36/427 (8%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMY-VKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K++H H++ G ++ +I Y ++ DLV A VF+ + WN ++ G +
Sbjct: 328 KKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQ 387
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ ++ + +E + PD MT V+ A K G ++H +VIK+GF D+ V
Sbjct: 388 SDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFV 447
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N LI +Y + G+ +F M KDVVSW ++I Y + + +++M+AE
Sbjct: 448 SNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEV 507
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D++T+ V+SAC LG+ + + + R + + + NTLID Y + + A +
Sbjct: 508 QADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEK 567
Query: 456 VFHQ-------------------------------IPDKNVISWTSIILGLRLNNRSFEA 484
VF Q IP+K++ISW+S+I + ++
Sbjct: 568 VFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDS 627
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L FR+M +KP++V + S+LSACA +GAL GK IH + R + D + N+L+DM
Sbjct: 628 LELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDM 687
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKL 600
+ +CG M+ A F E+D +WN ++ G A G A F M+ + N
Sbjct: 688 FAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTF 747
Query: 601 MGLFRKC 607
+G+ C
Sbjct: 748 LGVLIAC 754
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L + + + A+ + QE + D +++ C EG +HS V K
Sbjct: 379 NTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIK 438
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + N+ + ++ GDL A +F +M +D+ SWN LIGGY++ F E L+L
Sbjct: 439 LGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLAL 498
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV--------- 234
++ M V+ D T V+ C + D + ++ R E DV +
Sbjct: 499 FELM-QAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYC 557
Query: 235 ----------------------VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+NA+I Y K G+LV A+ +FD +P +D ISW++MI
Sbjct: 558 RIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICA 617
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + + L LF M+ V PD + ++SV+SA +G LG+ +H YV + D
Sbjct: 618 YSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTD 677
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ N LI M+ G +E +VF+ ME KD +SW ++I + D+A+ + M
Sbjct: 678 TIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLT 737
Query: 393 EGSMPDEITIASVLSACA 410
EG P+E+T VL ACA
Sbjct: 738 EGPRPNEVTFLGVLIACA 755
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 237/514 (46%), Gaps = 38/514 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYA 172
G LH K R+GN+ + ++ K G + ++ VF +M D R+L SW +I G+A
Sbjct: 91 GEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFA 150
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEAD 231
G EAL L+ M G++P+ TF V+ C +++G ++ + + +
Sbjct: 151 MHGLSVEALELFAEMR-RAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPE 209
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ +I M + G L A + +G+P + + I W ++ + GE G M+
Sbjct: 210 IKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMIS 269
Query: 291 EVLVDP--DFMTLSSVIS----------ASELVGDEKL-------------------GRE 319
++ + DF LS+V++ A +L+ + K+ ++
Sbjct: 270 DLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAVKK 329
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMY-LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H +++ G + + +I+ Y L + KVF ++ES W T++ S
Sbjct: 330 LHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSD 389
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
P A+ Y+ + +G PD +T VL ACA G ++H ++ G + I ++N
Sbjct: 390 APKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSN 449
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
+LI +Y+ C + A +F ++ K+V+SW S+I G NR E L F M ++
Sbjct: 450 SLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQA 509
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ VT+V ++SAC +G + + R + D +L N L+D Y R G+++ A F
Sbjct: 510 DKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVF 569
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +++ N ++ YA+ G A++ F ++
Sbjct: 570 SQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQI 603
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 235/484 (48%), Gaps = 40/484 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++ F +G++ +A +F +M R++ SW LI GY +A + EA++L++ M GG+
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM-AGGI 68
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P T V+ + + G+ +H + ++ G +D V N+LI +Y K G + +
Sbjct: 69 SPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLK 128
Query: 254 VFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +R+ +SW ++ISG+ +G ++ L LF MR + P+ +T SVI+A G
Sbjct: 129 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGG 188
Query: 313 DEKLGRE-VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
+ G V + ++ +I M G E E++ + + +V+ W +
Sbjct: 189 LVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRIL 248
Query: 371 ISC---YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL---HQL 424
+ C Y + +A++ +E E S D +++VL+ + + KL ++
Sbjct: 249 LGCCSKYGEVEMGKRAIKMISDLERE-SGGDFAVLSNVLNELGRFSDAEQARKLLDERKI 307
Query: 425 AMRTGLI-----------------SYIIIANTLIDMYSKCKCIDK----------ALEVF 457
GL ++++++ Y+ K I A +VF
Sbjct: 308 VKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVF 367
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
QI W +++ GL ++ +A++F++K +KP+++T +L ACA+ A
Sbjct: 368 EQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPK 427
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA 575
G+++H+H +++G D F+ N+L+ +Y CG + A + F+ +DV +WN L+ GY+
Sbjct: 428 EGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYS 487
Query: 576 ERGQ 579
+R +
Sbjct: 488 QRNR 491
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N +I ++ I+ A +F Q+P +NV+SWT +I G EA+ FR MM +
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGIS 69
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ +T+++++ A + +G ++ G+ +H + ++ G+ D + N+L+D+Y + G ++ +
Sbjct: 70 PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 129
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + R++ +W +++G+A G A E F +M
Sbjct: 130 FDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEM 165
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 277/531 (52%), Gaps = 5/531 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVS 122
N+ ++ + G + +++ M +L I + +LV C + EG+ +H V+
Sbjct: 27 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 86
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ V + A L ++ +G + + VF +M DR++ SW L+ GY+ G +E +
Sbjct: 87 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVID 146
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Y+ M GV + + V+ +CG + D G+++ V++ G E+ + V N+LI+M
Sbjct: 147 IYKGMRG-EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 205
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
G++ A +FD M +RD ISWN++ + Y +NG + +F +MR + + T+S
Sbjct: 206 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+++S V +K GR +HG V+KMGF V VCN L++MY G E VF +M +K
Sbjct: 266 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 325
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D++SW ++++ + A+ M + G + +T S L+AC + G LH
Sbjct: 326 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 385
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
L + +GL II N L+ MY K + ++ V Q+P ++V++W ++I G +
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 445
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNAL 540
+AL F+ M + + N +T+VS+LSAC G L+ GK +HA+ + G D + N+L
Sbjct: 446 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL 505
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ MY +CG + + + FN + R++ WN +L A G G + KM
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 256/522 (49%), Gaps = 4/522 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ + M+ + +E+++ ++ C + G + V K+ + +
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +SM G++ +A Y+F +M +RD SWN + YA+ G +E+ ++ M
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD- 257
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ + T +L G V K G+ +H V++ G+++ V V N L+ MY G V A L
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP +D ISWN++++ + +G + L L M +++T +S ++A
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ GR +HG V+ G + + N L+ MY G E +V +M +DVV+W +I
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGLIS 432
Y PDKA+ +Q M EG + IT+ SVLSAC G+ L+ G LH + G S
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ N+LI MY+KC + + ++F+ + ++N+I+W +++ + E L KM
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + + LSA A++ L G+++H A+++G D F+ NA DMY +CG +
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
S R + +WNIL++ G F +M++
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 231/441 (52%), Gaps = 4/441 (0%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ KFG + A ++F M R+ SWN ++ G + G + E + +++M +G +KP +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSF 59
Query: 199 TFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
++ CG + R G +VH V + G +DV V A++ +Y G + +R VF+
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MP R+ +SW +++ GY + GE + + ++ MR V + ++S VIS+ L+ DE LG
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++ G V+K G ++V N LI M S GN + +F +M +D +SW ++ + Y +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+++ + +M + T++++LS + + G +H L ++ G S + +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
NTL+ MY+ +A VF Q+P K++ISW S++ + RS +AL M+ + K
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 498 -NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT S L+AC G+ +H + G+ ++ + NAL+ MY + G M +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 557 -FNSNERDVSAWNILLTGYAE 576
RDV AWN L+ GYAE
Sbjct: 420 LLQMPRRDVVAWNALIGGYAE 440
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 224/449 (49%), Gaps = 15/449 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYLHSVVSKTMS 126
NG +E++ + M+ + V+ + L+ + +W RG +H +V K
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG------IHGLVVKMGF 292
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
V + N L M+ G A VF +M +DL SWN L+ + G +AL L
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G + TF L C ++G+ +H V+ G + + NAL++MY K G
Sbjct: 353 MI-SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
++ +R V MP+RD ++WNA+I GY E+ + K L F MR V +++T+ SV+S
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 307 ASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A L GD + G+ +H Y++ GF D V N LI MY G+ + +F+ +++++++
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W M++ ++ ++ M + G D+ + + LSA A L L+ G +LH LA
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ G I N DMYSKC I + +++ ++++ SW +I L + E
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIG 513
F +M+ + +KP VT VS+L+AC+ G
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGG 680
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 209/418 (50%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G AL L SM V+ + + C +++G LH +V
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 390
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +GNA +SM+ K G++ + V +M RD+ +WN LIGGYA+ D+AL+
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Q M V GV + T VL C DL +RGK +H +++ G+E+D V N+LITMY
Sbjct: 451 FQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL ++ +F+G+ R+ I+WNAM++ +G + L L MR V D + S
Sbjct: 510 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+SA+ + + G+++HG +K+GF D + N MY G E K+ ++
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 629
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+ SW +IS ++ T+ M G P +T S+L+AC+ G +D G+ +
Sbjct: 630 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 689
Query: 423 QLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ R GL I +ID+ + + +A ++P K N + W S++ +++
Sbjct: 690 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 747
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 288/575 (50%), Gaps = 15/575 (2%)
Query: 47 VQVLNTQ--NTSSIATKNP-----NSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDAL 98
V V N+Q TSS+ + N +N LC N +AL+ D Q+ + +
Sbjct: 8 VSVSNSQIPATSSVVSTIKTEELMNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTY 67
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
++L+ C R +G +H + + L N LSM+ K G L A VF M +
Sbjct: 68 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 127
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R+L S+ +I GY++ G EA++LY +M V PD + F +++ C D+ GK+
Sbjct: 128 RNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLV-PDQFAFGSIIKACACAGDVVLGKQ 186
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H VI+ + + NALI MYV+ + A VF G+P +D ISW+++I+G+ + G
Sbjct: 187 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGF 246
Query: 279 YMKGL-MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L L M+ + P+ S + A + G ++HG IK+ + +
Sbjct: 247 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGC 306
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L MY G + +VF+++E D SW +I+ + D+AV + M G +P
Sbjct: 307 SLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIP 366
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D I++ S+L A L G+++H ++ G ++ + + N+L+ MY+ C + +F
Sbjct: 367 DAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLF 426
Query: 458 HQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
+K + +SW +I+ + + E L F+ M+++ +P+ +T+ ++L C I +L
Sbjct: 427 EDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 486
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G ++H ++ + G+ + F+ N L+DMY +CG ++ A F+S + DV +W+ L+ GY
Sbjct: 487 KLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGY 546
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A+ G G A FR+M S + N +G+ C
Sbjct: 547 AQSGFGEEALILFREMKSSGIEPNHVTFVGVLTAC 581
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 262/518 (50%), Gaps = 5/518 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A+ M + ++ D+ A ++++ C G LH+ V K S +
Sbjct: 143 NGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIA 202
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M+V+F + A VF + +DL SW+ +I G+++ GF EALS + M G
Sbjct: 203 QNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 262
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P+ Y F L+ C + G ++H I+ + +L MY +CG L AR
Sbjct: 263 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSAR 322
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + + D SWN +I+G NG + + +F MR PD ++L S++ A
Sbjct: 323 RVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPM 382
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMI 371
G ++H ++IK GF D+SVCN L+ MY + +F +K D VSW ++
Sbjct: 383 ALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAIL 442
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ P + + +++M PD IT+ ++L C + +L LG ++H + +TGL+
Sbjct: 443 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLV 502
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I N LIDMY+KC + +A +F + + +V+SW+++I+G + EALI FR+M
Sbjct: 503 LEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREM 562
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHA-HALRIGVAFDGFLPNALLDMYVRCGR 549
+ ++PN VT V +L+AC+ +G + G +++A G++ + ++D+ R G
Sbjct: 563 KSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGH 622
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+ A + E DV W LL+ +G LA++
Sbjct: 623 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQK 660
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 214/379 (56%), Gaps = 1/379 (0%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G VH +++++G+ A V NALI+ Y K + A +VFD MP+RD ISWN++I G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG Y K + LF+ M + D TL SV+ A +G VHGY ++ G + S+
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ MY + + K+F ME K+VVSWT MI+ Y + DK +Q M EG
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD I S L A A +L G +H A+R G+ + +AN L++MY KC +++A
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGAL 515
+F + K+ ISW ++I G +N + EA F +M+L L+PN+VT+ IL A A + +L
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSL 302
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+E+HA+A+R G D F+ NAL+DMYV+CG + A F+ +++ +W I++ GY
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGY 362
Query: 575 AERGQGALAEEFFRKMIDS 593
G+G A F +M S
Sbjct: 363 GMHGRGRDAIALFEQMKGS 381
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 238/468 (50%), Gaps = 12/468 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+GL +H + K + NA +S + K + A VF +M RD+ SWN +IGG A
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G +D+A+ L+ RM W+ G + D T V+ C G VH + +R G ++
Sbjct: 62 SNGLYDKAVELFVRM-WLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ NAL+ MY C D +F M +++ +SW AMI+ Y G + K LF M
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 293 LVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ PD ++S + A G+E L G+ VHGY I+ G + + V N L++MY+ G E
Sbjct: 181 GIRPDVFAITSALDA--FAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E +F + KD +SW T+I Y S L ++A + M + P+ +T+A +L A A
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L +L+ G ++H A+R G + +AN L+DMY KC + A +F + +KN+ISWT
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTI 357
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G ++ R +A+ F +M ++P++ + +IL AC+ G G +A+R
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFF-NAMRNE 416
Query: 530 VAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
+ L + ++D+ G +K A+ + E D S W LL G
Sbjct: 417 HRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 218/447 (48%), Gaps = 7/447 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG ++A++ M +D L++++ C G +H +
Sbjct: 54 NSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVR 113
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T LGNA L M+ D +F M +++ SW +I Y +AG FD+ L
Sbjct: 114 TGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGL 173
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q M + G++PDV+ L G LK GK VH + IR G E + V NAL+ MYV
Sbjct: 174 FQEM-GLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYV 232
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR +FD + K+D ISWN +I GY + + LF M + + P+ +T++
Sbjct: 233 KCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMAC 291
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A+ + + GRE+H Y ++ G+ +D V N L+ MY+ G ++F + +K+
Sbjct: 292 ILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKN 351
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SWT MI+ Y A+ ++ M+ G PD + +++L AC+ G D G +
Sbjct: 352 LISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFN 411
Query: 424 LAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
AMR + + ++D+ + +A E +P + + W S++ G R+ +R
Sbjct: 412 -AMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRI-HR 469
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILS 507
+ + +M+ L+P + +L+
Sbjct: 470 NVKLAEKVAEMVFELEPENTGYYVLLA 496
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 272/530 (51%), Gaps = 3/530 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N + L + G + AL + M N+ D+ +++ C + +H
Sbjct: 81 NWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARS 140
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H+ + G+A + ++ G + A VF ++ RD WNV++ GY K+G FD A+
Sbjct: 141 LGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGT 200
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + V T+ C+L C + G ++H VI G+E D V N L+ MY
Sbjct: 201 FCEMRTSYSMVNSV-TYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYS 259
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L+ AR +F+ MP+ D ++WN +I+GY +NG + LF M V PD +T +S
Sbjct: 260 KCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 319
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ + G + +EVH Y+++ DV + + LI +Y G+ E K+F + D
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V T MIS Y L A+ T++ + EG + + +T+ASVL ACA + L G +LH
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHC 439
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ L + + + + + DMY+KC +D A E F ++ D++ + W S+I N +
Sbjct: 440 HILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEI 499
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ FR+M M K +SV+L S LSA A + AL GKE+H + +R + D F+ + L+D
Sbjct: 500 AIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLID 559
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
MY +CG + AW FN + ++ +WN ++ Y G + + +M+
Sbjct: 560 MYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEML 609
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 238/456 (52%), Gaps = 3/456 (0%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L ++V G A +F ++ R WN +I G G+FD AL Y +M V PD
Sbjct: 53 LGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPD 111
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTFP V++ CGG+ ++ VH G+ D+ +ALI +Y G + AR VFD
Sbjct: 112 KYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFD 171
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+P RD I WN M+ GY ++G++ + F MR + +T + ++S G+
Sbjct: 172 ELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCA 231
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++HG VI GF D V N L+ MY GN K+F+ M D V+W +I+ Y
Sbjct: 232 GTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQ 291
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ D+A + M + G PD +T AS L + G+L ++H +R + + +
Sbjct: 292 NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 351
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
+ LID+Y K ++ A ++F Q +V T++I G L+ + +A+ FR ++ +
Sbjct: 352 KSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGM 411
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
NS+T+ S+L ACA + AL GKE+H H L+ + + +A+ DMY +CGR+ A+
Sbjct: 412 VTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYE 471
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F ++RD WN +++ +++ G+ +A + FR+M
Sbjct: 472 FFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQM 507
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 189/391 (48%), Gaps = 2/391 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+ R C +++ ++VH VI G + ++ +YV CG A +F + R
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+ WN MI G + G + L+ + M V PD T VI A + + L VH
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+GF D+ + LIK+Y G + +VF + +D + W M+ Y S D
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ T+ M SM + +T +LS CA GN G +LH L + +G +ANTL+
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MYSKC + A ++F+ +P + ++W +I G N + EA F M+ +KP+SVT
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
S L + G+L KE+H++ +R V FD +L +AL+D+Y + G ++ A F N
Sbjct: 317 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNI 376
Query: 562 R-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
DV+ +++GY G A FR +I
Sbjct: 377 LVDVAVCTAMISGYVLHGLNIDAINTFRWLI 407
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 192/393 (48%), Gaps = 4/393 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS + + V L +A + ++ K GD+ A +F + D+ +I GY G
Sbjct: 336 VHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGL 395
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+A++ ++ + G V + T VL C V LK GKE+H H+++ E V+V +
Sbjct: 396 NIDAINTFRWLIQEGMVTNSL-TMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGS 454
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
A+ MY KCG L A F M RD + WN+MIS + +NG+ + LF M
Sbjct: 455 AITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKF 514
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D ++LSS +SA+ + G+E+HGYVI+ FS D V + LI MY GN VF
Sbjct: 515 DSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVF 574
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ M+ K+ VSW ++I+ Y P + ++ Y M G PD +T ++SAC G +D
Sbjct: 575 NLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVD 634
Query: 417 LGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
GI H + G+ + + ++D+Y + + +A + +P + W +++
Sbjct: 635 EGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGA 694
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
RL+ + E + +L L P + +LS
Sbjct: 695 CRLHG-NVELAKLASRHLLELDPKNSGYYVLLS 726
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 2/308 (0%)
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + +D L S+ A + R+VH VI G D + + ++ +Y+ G
Sbjct: 1 MAKPETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCG 60
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +F +E + + W MI D A+ Y M PD+ T V+
Sbjct: 61 RFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIK 120
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC L N+ L + +H A G + + LI +Y+ I A VF ++P ++ I
Sbjct: 121 ACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTIL 180
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++ G + A+ F +M + NSVT ILS CA G G ++H +
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
G FD + N L+ MY +CG + A FN+ + D WN L+ GY + G A
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300
Query: 586 FFRKMIDS 593
F MI +
Sbjct: 301 LFNAMISA 308
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 3/159 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V + + + + M+ K G+L AW VF M ++ SWN +I Y
Sbjct: 535 GKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGN 594
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADV 232
G E L LY M G+ PD TF ++ CG + G H +G A +
Sbjct: 595 HGCPRECLDLYHEML-RAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARM 653
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMI 270
+ ++ +Y + G + A MP D W ++
Sbjct: 654 EHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLL 692
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 248/467 (53%), Gaps = 14/467 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
LS K + HA VF + + WN +I G A+ G D A L++ M +G V
Sbjct: 116 TTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMG-V 174
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
K D YTF +L C + G+ VH VI+ G+ VVN+LITMY KCG +V A
Sbjct: 175 KADKYTFATMLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACE 233
Query: 254 VFDGMPK---RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF+ + RD +S+NAMI G+ ++F M++ DP +T SV+S+
Sbjct: 234 VFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS 293
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + G + IKMGF V+V N ++ MY FG E + +F ME +DVVSW M
Sbjct: 294 L---RAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIM 350
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+S + L ++A+ +Y M EG PDE T S+L+A L +++ +H L ++GL
Sbjct: 351 VSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVEM---IHSLLCKSGL 407
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I + N L+ Y + I +A ++F +P K++ISW SII G +N + L F
Sbjct: 408 VK-IEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSA 466
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++ +KPN+ +L +LS C+ + A+ GK++H + LR G + + L NAL+ MY +CG
Sbjct: 467 LLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGS 526
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+ A F++ ERD WN +++ YA+ G+G A F M S G
Sbjct: 527 LDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPG 573
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 250/490 (51%), Gaps = 23/490 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ + A M ++ + D+ ++ LC + +D G ++HSVV K+ +
Sbjct: 157 GNRDFAFGLFRDMNKMGVKADKYTFATMLSLCSLEL-FDYGRHVHSVVIKSGFLGWTSVV 215
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCD---RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ ++M+ K G + A VF + + RD S+N +I G+A ++A +++ M
Sbjct: 216 NSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDM-QK 274
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P TF V+ +C L+ G + I+ G+ V V NA++TMY G+++
Sbjct: 275 GCFDPTEVTFVSVMSSC---SSLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIE 331
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+ +F+GM +RD +SWN M+S + + + ++ ++ MR ++PD T S+++A++
Sbjct: 332 VQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDS 391
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ ++ +H + K G + V N L+ Y G + ++FS + K ++SW ++
Sbjct: 392 L---QVVEMIHSLLCKSGLVK-IEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSI 447
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + P + +E + + + P+ +++ VLS C+ + + G ++H +R G
Sbjct: 448 ISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGF 507
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + N L+ MY+KC +DKAL VF + +++ I+W +II + R EA+ F
Sbjct: 508 SSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEA 567
Query: 491 MMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDM 543
M + +KP+ T S+LSAC+ G + G I +++ GF+P+ ++D+
Sbjct: 568 MQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKV----YGFVPSVDHFSCIVDL 623
Query: 544 YVRCGRMKPA 553
R G + A
Sbjct: 624 LGRSGYLDEA 633
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 184/329 (55%), Gaps = 7/329 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + NA ++M+ FG++ +F M +RD+ SWN+++ + + +EA+ Y +M
Sbjct: 313 VAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKM-R 371
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++PD +T+ +L L+ + +H + + G ++V+NAL++ Y + G +
Sbjct: 372 REGIEPDEFTYGSLL---AATDSLQVVEMIHSLLCKSGL-VKIEVLNALVSAYCRHGKIK 427
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
RA +F G+P + ISWN++ISG+ NG ++GL F + V P+ +LS V+S
Sbjct: 428 RAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICS 487
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G++VHGY+++ GFS +VS+ N L+ MY G+ ++ +VF M +D ++W
Sbjct: 488 SMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNA 547
Query: 370 MISCYEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS Y ++AV ++ M+ + G PD+ T SVLSAC+ G +D GI++ ++
Sbjct: 548 IISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKV 607
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEV 456
G + + + ++D+ + +D+A V
Sbjct: 608 YGFVPSVDHFSCIVDLLGRSGYLDEAERV 636
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 205/467 (43%), Gaps = 47/467 (10%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N ++ A++ ++L L+ PD Y + G ++H +
Sbjct: 15 NHMLAALARSNQHTQSLKLFVHAH--SSFTPDHYILSTAITAAANARRAAFGAQLHALAV 72
Query: 225 RFGYEADVDVVNALITMYVKCG-DLVRARL------------------------------ 253
R G A V N+L+++Y K DL +L
Sbjct: 73 RTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHAL 132
Query: 254 -VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG+PK WNA+I+G E G LF M ++ V D T ++++S L
Sbjct: 133 KVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCSLEL 192
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME---SKDVVSWTT 369
+ GR VH VIK GF SV N LI MY G + +VF E S+D VS+
Sbjct: 193 FD-YGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNA 251
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI + + A ++ M+ P E+T SV+S+C+ +L G + A++ G
Sbjct: 252 MIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS---SLRAGCQAQSQAIKMG 308
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + + N ++ MYS + + +F + +++V+SW ++ N EA++ +
Sbjct: 309 FVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYL 368
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
KM ++P+ T S+L+A +L + IH+ + G+ L NAL+ Y R G
Sbjct: 369 KMRREGIEPDEFTYGSLLAA---TDSLQVVEMIHSLLCKSGLVKIEVL-NALVSAYCRHG 424
Query: 549 RMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++K A+ F+ + + +WN +++G+ G E F ++ ++
Sbjct: 425 KIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQ 471
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 46/357 (12%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
K I N M++ + ++ + L LF+ PD LS+ I+A+ G +
Sbjct: 8 KEPHIKLNHMLAALARSNQHTQSLKLFVHAHSSFT-PDHYILSTAITAAANARRAAFGAQ 66
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV-FSRMESKDVVSWTTMISC----- 373
+H ++ G V N L+ +Y K+ F ++ D SWTT++S
Sbjct: 67 LHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLD 126
Query: 374 --------YEGSVLP--------------------DKAVETYQMMEAEGSMPDEITIASV 405
++G +P D A ++ M G D+ T A++
Sbjct: 127 SVEHALKVFDG--IPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATM 184
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--- 462
LS C+ L D G +H + +++G + + + N+LI MY KC C+ A EVF + +
Sbjct: 185 LSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGS 243
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
++ +S+ ++I G RS +A + FR M P VT VS++S+C+ + A G +
Sbjct: 244 RDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRA---GCQA 300
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
+ A+++G + NA++ MY G + N F ERDV +WNI+++ + +
Sbjct: 301 QSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQE 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +NG Q L+ ++ + + +L ++ +C G +H + +
Sbjct: 445 NSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILR 504
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V LGNA ++M+ K G L A VF M +RD +WN +I YA+ G +EA+
Sbjct: 505 HGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCC 564
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
++ M G+KPD TF VL C + G + +++ +G+ VD + ++ +
Sbjct: 565 FEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLL 624
Query: 243 VKCGDLVRARLV 254
+ G L A V
Sbjct: 625 GRSGYLDEAERV 636
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 260/513 (50%), Gaps = 43/513 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF----------- 162
G +HS +T H ++ LG+ K G + A +F KM +RD F
Sbjct: 17 GSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 163 --------------------SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
SWN LI GY K+G EA +L+ M G+KP+ YT
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGS 130
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KR 261
VLR C + L RG+++H H I+ G++ DV+VVN L+ MY +C + A +F+ M ++
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ ++W +M++GY +NG K + F +R + T SV++A V ++G +VH
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
++K GF ++ V + LI MY E + ME DVVSW +MI L
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI--KLHQLAMRTGLISYIIIANT 439
+A+ + M D+ TI S+L+ C L ++ I H L ++TG +Y ++ N
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPN 498
L+DMY+K +D AL+VF + +K+VISWT+++ G N EAL F M + + P+
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+ S+LSA A + L G+++H + ++ G + N+L+ MY +CG ++ A FN
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFN 489
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
S E RD+ W L+ GYA+ G A+ +F M
Sbjct: 490 SMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 226/430 (52%), Gaps = 3/430 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +GS +A MQ I +E L +++R+C G +H K
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALS 182
T L V + N L+M+ + + A Y+F M +++ +W ++ GY++ GF +A+
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ + G + + YTFP VL C V + G +VH +++ G++ ++ V +ALI MY
Sbjct: 214 CFRDLRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ AR + +GM D +SWN+MI G G + L +F M E + D T+
Sbjct: 273 AKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 303 SVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+++ L E K+ H ++K G++ V N L+ MY G + KVF M
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KDV+SWT +++ + D+A++ + M G PD+I ASVLSA A L L+ G ++
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +++G S + + N+L+ MY+KC ++ A +F+ + +++I+WT +I+G N
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLL 512
Query: 482 FEALIFFRKM 491
+A +F M
Sbjct: 513 EDAQRYFDSM 522
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 152/325 (46%), Gaps = 9/325 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVVSKTMSHLSVR 131
G + +AL M E ++ +D+ + +++ R + H ++ KT
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA + M+ K G + A VF M ++D+ SW L+ G G +DEAL L+ M VG
Sbjct: 366 VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVG 424
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD VL + L+ G++VH + I+ G+ + + V N+L+TMY KCG L A
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASEL 310
++F+ M RD I+W +I GY +NG F MR V + P + +I +L
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMI---DL 541
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE---KVFSRMESKDVVSW 367
G +V + +M D +V ++ GN E GE K +E + V +
Sbjct: 542 FGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPY 601
Query: 368 TTMISCYEGSVLPDKAVETYQMMEA 392
+ + Y + D+A ++M++
Sbjct: 602 VQLSNMYSAAGRQDEAANVRRLMKS 626
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
NT+I YS + + A ++F P KN ISW ++I G + EA F +M + +K
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN TL S+L C + L+ G++IH H ++ G FD
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG--FD----------------------- 157
Query: 557 FNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN--WRKLM 601
DV+ N LL YA+ + + AE F M K N W ++
Sbjct: 158 -----LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 247/467 (52%), Gaps = 20/467 (4%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
DL + + + + FSWNV I G+ + EA+ LY+R+ G KPD YT+P +
Sbjct: 27 DLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 86
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ C + ++ G E+ HV+ G+++D+ V NA+I + V CGDL AR +FD RD +
Sbjct: 87 KACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 146
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SWN+MI+GY G + L + M+ + PD +T+ V+S+ + D LGRE H Y+
Sbjct: 147 SWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYI 206
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--SCYEGSVLP-- 380
+ G V + N L+ MY+ GN E K+F M +K +VSWTTM+ + V+P
Sbjct: 207 EENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWN 266
Query: 381 ------------DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+A+ + M+A PDE+T+ S LSAC+ LG LD+GI +H +
Sbjct: 267 AMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKH 326
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
L + + LIDMY+KC I KA++VF ++P +N ++WT+II GL L+ + A+ +F
Sbjct: 327 ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYF 386
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVR 546
+M+ N + P+ VT + +LSAC G + G++ + + + ++ + ++D+ R
Sbjct: 387 SEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGR 446
Query: 547 CGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G ++ A S E D W L G + E K++
Sbjct: 447 AGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLL 493
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 195/370 (52%), Gaps = 27/370 (7%)
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVL----VDPDFMTLSSVISASELVGDEKLG 317
+ SWN I G+ ++ + ++L+ + VL PD T + A + ++G
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLY---KRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 98
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
E+ G+V+ +GF D+ V N +I + +S G+ + K+F + +D+VSW +MI+ Y
Sbjct: 99 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 158
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A+ Y+ M+ EG PDE+T+ V+S+CA L +LDLG + H GL + +A
Sbjct: 159 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 218
Query: 438 NTLIDMYSKCKCIDKALEVFH----------------QIPDKNVISWTSIILGLRLNNRS 481
N L+DMY KC ++ A ++F ++PDK+V+ W ++I G NR
Sbjct: 219 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRG 278
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EAL F +M +N+ P+ VT+VS LSAC+++GAL G IH + + ++ + L AL
Sbjct: 279 KEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTAL 338
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNW 597
+DMY +CG++ A F R+ W +++G A G A +F +MID+ +
Sbjct: 339 IDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDE 398
Query: 598 RKLMGLFRKC 607
+GL C
Sbjct: 399 VTFLGLLSAC 408
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 188/365 (51%), Gaps = 19/365 (5%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA + + V GDL A +F K C RDL SWN +I GY + G+ EAL+ Y+ M V
Sbjct: 116 VSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMK-VE 174
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+KPD T V+ +C + DL G+E H ++ G + V + NAL+ MY+KCG+L A
Sbjct: 175 GIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESA 234
Query: 252 R----------------LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
R ++FD MP +D + WNAMI GY + L LF M+ + ++
Sbjct: 235 RKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNIN 294
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD +T+ S +SA +G +G +H Y+ K S +V++ LI MY G + +V
Sbjct: 295 PDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQV 354
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + ++ ++WT +IS A+ + M MPDE+T +LSAC G +
Sbjct: 355 FQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLV 414
Query: 416 DLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIIL 473
+ G K Q++ + L + + ++D+ + +++A E+ +P + + + W ++
Sbjct: 415 EEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFF 474
Query: 474 GLRLN 478
R++
Sbjct: 475 ACRIH 479
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 172/400 (43%), Gaps = 65/400 (16%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N G +AL + M+ I DE ++ +V C D G H + +
Sbjct: 149 NSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 208
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHA--------------W--YVFGKMCDRDLFSWNVL 167
L+V L NA + M++K G+L A W +F +M D+D+ WN +
Sbjct: 209 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAM 268
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
IGGY A EAL+L+ M + + PD T L C + L G +H ++ +
Sbjct: 269 IGGYVHANRGKEALALFNEMQAM-NINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE 327
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+V + ALI MY KCG + +A VF +P R+ ++W A+ISG +G + F
Sbjct: 328 LSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFS 387
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + V PD +T ++SA HG ++
Sbjct: 388 EMIDNSVMPDEVTFLGLLSAC-----------CHGGLV---------------------- 414
Query: 348 NREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
EEG K FS+M SK +S ++ M+ + L ++A E + M E D +
Sbjct: 415 --EEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA---DAVVW 469
Query: 403 ASVLSACACLGNLDLG----IKLHQLAMRTGLISYIIIAN 438
++ AC GN+ +G KL Q+ I Y+++AN
Sbjct: 470 GALFFACRIHGNVLMGERAASKLLQMDPHDSGI-YVLLAN 508
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 267/504 (52%), Gaps = 26/504 (5%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
KRG ++ +++H+ + + +++K G HA +F +M RD+ SWNVL
Sbjct: 84 KRGVNQFIHVHT---------------SLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVL 128
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GY++ G+ A+ L+ M KP+ T +L +CG + +G+ +H I+ G
Sbjct: 129 ICGYSQNGYLYHAIQLFVDMLR-ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAG 187
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ D + NAL++MY KC DL ++L+FD M ++ +SWN MI Y +NG + K ++ F
Sbjct: 188 FGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFK 247
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + P +T+ +++SA+ VH YV+K GF++D SV L+ +Y G
Sbjct: 248 EMLKEGFHPSSVTIMNLVSAN------AFPENVHCYVVKCGFTNDASVVTSLVCLYAKQG 301
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
++++ +KD+++ T +IS Y + AVE + PD + + VL
Sbjct: 302 FTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH 361
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+ +G H +++GL + ++AN LI +YS+ I+ AL +F+ + +K +I+
Sbjct: 362 GITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT 421
Query: 468 WTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W S+I G +S +A+ F +M M KP+++T+ S+LS C ++G L G+ +H++ L
Sbjct: 422 WNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYIL 481
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEE 585
R V + F+ AL+DMY +CGR+ A F N + ++ WN +++GY+ G A
Sbjct: 482 RNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFG 541
Query: 586 FFRKMIDS--KGNWRKLMGLFRKC 607
+ K+ + K + +G+ C
Sbjct: 542 CYSKLQEQGLKPDKITFLGVLAAC 565
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 245/527 (46%), Gaps = 21/527 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L A++ M N ++ +V+L+ C +G +H K L L
Sbjct: 135 NGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHL 194
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +SM+ K DL + +F +M ++ + SWN +IG Y + G FD+A+ LY + G
Sbjct: 195 NNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAI-LYFKEMLKEG 253
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P T L + P+ VH +V++ G+ D VV +L+ +Y K G A+
Sbjct: 254 FHPSSVTI-MNLVSANAFPE-----NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAK 307
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ P +D I+ A+IS Y E G+ + FI ++ + PD + L V+
Sbjct: 308 QLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPS 367
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+G HGY +K G S+D V N LI +Y F E +F M K +++W +MIS
Sbjct: 368 HFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMIS 427
Query: 373 -CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
C + D A+E + M G PD ITIAS+LS C LGNL +G LH +R +
Sbjct: 428 GCVQAGKSSD-AMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVR 486
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I LIDMYSKC +D A +VF+ I D + +W +II G L A + K+
Sbjct: 487 VEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKL 546
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
LKP+ +T + +L+AC G + G E I G +P+ ++ +
Sbjct: 547 QEQGLKPDKITFLGVLAACTHGGLVYLGLEY----FNIMTKEYGLMPSLQHYACIVALLG 602
Query: 546 RCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ G K A N E D + W LL + + L E +K+
Sbjct: 603 KEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKL 649
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 201/415 (48%), Gaps = 16/415 (3%)
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLK--------RGKEVHVHVIRFGYEADVDVVNA 237
R V P+ +TF +++ P + +++ ++ G + V +
Sbjct: 37 RQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFIHVHTS 96
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI +Y+K G AR +FD M RD +SWN +I GY +NG + LF+ M P+
Sbjct: 97 LIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPN 156
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T+ S++ + GR +HG+ IK GF D + N L+ MY + E + +F
Sbjct: 157 QTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFD 216
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M+ K VVSW TMI Y + L DKA+ ++ M EG P +TI +++SA A N
Sbjct: 217 EMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPEN--- 273
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
+H ++ G + + +L+ +Y+K + A +++ P K++I+ T+II
Sbjct: 274 ---VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSE 330
Query: 478 NNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
A+ F + + L++KP++V L+ +L G H + ++ G++ D +
Sbjct: 331 KGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLV 390
Query: 537 PNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N L+ +Y R ++ A + F + E+ + WN +++G + G+ + A E F +M
Sbjct: 391 ANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEM 445
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 165/351 (47%), Gaps = 21/351 (5%)
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-------SELVGDEKL-GRE 319
++ F+N L++F + + V+P+ T S +I A + L R+
Sbjct: 19 SLFHSLFQNAT-SPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQ 77
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+ +K G + + V LI +Y+ G +F +M +DVVSW +I Y +
Sbjct: 78 IQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGY 137
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
A++ + M E P++ TI S+L +C C + G +H ++ G + N
Sbjct: 138 LYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNA 197
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKP 497
L+ MY+KC ++ + +F ++ +K+V+SW ++I G+ N F+ I + K ML P
Sbjct: 198 LMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMI-GVYGQNGLFDKAILYFKEMLKEGFHP 256
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+SVT+++++SA A + +H + ++ G D + +L+ +Y + G A +
Sbjct: 257 SSVTIMNLVSANAF------PENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLY 310
Query: 558 N-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFR 605
+D+ +++ Y+E+G A E F + I D K + L+G+
Sbjct: 311 KYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH 361
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 243/460 (52%), Gaps = 24/460 (5%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F + FV++GD + G F +N LI GY F A+S+Y+RM G V P
Sbjct: 46 FFANFVEYGDYACDYLEQGNT-RLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFV-P 103
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D++TFP +L+ C + G++VH V++ G AD V N+LI Y CGD A VF
Sbjct: 104 DMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVF 163
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D M RD +SWN++ISG+ + G + + + +F M V+P TL SV++A GD
Sbjct: 164 DEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMD---VEPSMTTLVSVLAACARNGDLC 220
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG VI+ F ++ + N ++ MY+ G E + +F + ++D+VSWT MI+
Sbjct: 221 TGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLV 279
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
S P +++E + MM G PD I + SVLSACA LG LD G +H+ + G+ I
Sbjct: 280 QSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIH 339
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I ++DMY+KC CI+ AL++F+ + +N +W +++ GL ++ EAL F M+++
Sbjct: 340 IGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISG 399
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRI----------GVAFDGFLPNALLDMY 544
+KPN +T ++IL+AC G + G++ + ++ G D F LL+
Sbjct: 400 VKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEA 459
Query: 545 VRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAE 584
V R P + DV W +LL G L+
Sbjct: 460 VELARTMPM-------KPDVLIWGLLLNACTTVGNIELSH 492
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 196/380 (51%), Gaps = 12/380 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C G EG +H VV K + N+ + + GD A VF +M RD
Sbjct: 111 LLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRD 170
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN LI G+ KAG FDEA+S++ RM V+P + T VL C DL GK +H
Sbjct: 171 VVSWNSLISGFMKAGHFDEAISVFFRM----DVEPSMTTLVSVLAACARNGDLCTGKGIH 226
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
VI ++ ++ + NA++ MYVK G A+ +FD +P RD +SW MI+G ++
Sbjct: 227 -GVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPK 285
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF MMR + + PD + L+SV+SA +G G VH Y+ + G D+ + ++
Sbjct: 286 QSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIV 345
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E K+F M ++ +W ++ L +A+ +++M G P+EI
Sbjct: 346 DMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEI 405
Query: 401 TIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T ++L+AC G +D G K ++ L+ + +ID++ + +++A+E+
Sbjct: 406 TFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELART 465
Query: 460 IPDK-NVISWTSIILGLRLN 478
+P K +V+ W GL LN
Sbjct: 466 MPMKPDVLIW-----GLLLN 480
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 12/282 (4%)
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV----VSWTTM 370
++ R++H ++ G D V + +++ + +F E G+ +E + + ++
Sbjct: 19 RIFRQIHAQLVTSGLVYDDFVTSKVMEFFANF--VEYGDYACDYLEQGNTRLGSFPFNSL 76
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y G P AV Y+ M +G +PD T +L AC+ G ++H + ++ GL
Sbjct: 77 INGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGL 136
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
++ + N+LI Y C A +VF ++ ++V+SW S+I G EA+ +FFR
Sbjct: 137 LADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFR 196
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++++P+ TLVS+L+ACAR G L GK IH + + L NA+LDMYV+ G
Sbjct: 197 ---MDVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGC 252
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A N F+ RD+ +W I++TG + + E F M
Sbjct: 253 FYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMM 294
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 44/260 (16%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+Q+L+ M+ L I D L +++ C D G ++H +++ + +G A
Sbjct: 285 KQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAI 344
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A +F M R+ F+WN L+ G A G EAL+L++ M + GVKP+
Sbjct: 345 VDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMI-ISGVKPN 403
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF +L C CG + R FD
Sbjct: 404 EITFLAILTAC-----------------------------------CHCGLVDEGRKYFD 428
Query: 257 GMPKRDRI-----SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
M K + + MI + G + + L R + + PD + +++A V
Sbjct: 429 NMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVEL---ARTMPMKPDVLIWGLLLNACTTV 485
Query: 312 GDEKLGREVHGYVIKMGFSD 331
G+ +L + Y++++ D
Sbjct: 486 GNIELSHRIQDYILELDHDD 505
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ +R+M+ + P+ T +L AC+ G+++H +++G+ D ++ N+L+
Sbjct: 89 AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIR 148
Query: 543 MYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLM 601
Y CG A F+ RDV +WN L++G+ + G A F +M D + + L+
Sbjct: 149 CYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM-DVEPSMTTLV 207
Query: 602 GLFRKC 607
+ C
Sbjct: 208 SVLAAC 213
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 307/640 (47%), Gaps = 79/640 (12%)
Query: 26 PETSFYFKP-KTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLD 84
P TS +FKP K+ F+S +Q +N S+ K+ ++ LC +G L++++ L
Sbjct: 12 PHTS-HFKPRKSSKFASTRLAKLQE-KDENRRSL-YKSYFHHISSLCKDGHLQESVHLLS 68
Query: 85 SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR--LGNAFLSMFVK 142
M+ + + + L++ C ++R G +H+ + K + + + + K
Sbjct: 69 EMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAK 128
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
A +F ++ R++FSW ++G + GF ++AL + M GV PD + P
Sbjct: 129 CDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEM-QENGVFPDNFVLPN 187
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ CG + + GK VH +V++ G+ A V V ++L+ MY KCG L AR VFD M +++
Sbjct: 188 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 247
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++WN+MI GY +NG + + +F MR ++P +T++S +SAS + G++ H
Sbjct: 248 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 307
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
I D + + +I Y G E+ E VFSRM KDVV+W +IS Y K
Sbjct: 308 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGK 367
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ +M +E D +T++S+LSA A N+ LG + H +R L S +++AN++ID
Sbjct: 368 ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 427
Query: 443 MYSKCKCIDKALEVFHQIPDK-----------------------------------NVIS 467
MY+KC+ ID A +VF ++ NVIS
Sbjct: 428 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVIS 487
Query: 468 WTSIILGLRLNNR-----------------------------------SFEALIFFRKMM 492
W S+ILG N + +EA++FF+KM
Sbjct: 488 WNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ 547
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
++P+ ++ S+L AC I +L G+ IH R + +L+DMY +CG +
Sbjct: 548 EAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSID 607
Query: 552 PAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ + +++ +N +++ YA GQ A F+ +
Sbjct: 608 EAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHL 647
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 211/432 (48%), Gaps = 48/432 (11%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
A NL L E K+G H++ L LG++ ++ + K G + A VF +M
Sbjct: 292 ASANLDALIEGKQG-------HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM 344
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
++D+ +WN+LI Y + +AL++ M ++ D T +L ++K G
Sbjct: 345 LEKDVVTWNLLISSYVQHHQVGKALNMCHLM-RSENLRFDSVTLSSILSASAVTSNIKLG 403
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
KE H + IR E+DV V N++I MY KC + AR VFD +RD + WN +++ Y +
Sbjct: 404 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 463
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + L LF M+ V P+ ++ +SVI +GF
Sbjct: 464 GLSGEALKLFYQMQFDSVPPNVISWNSVI---------------------LGF------- 495
Query: 337 NPLIKMYLSFGNREEGEKVFSRMES----KDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
L G E + +FS+M+S ++++WTT+IS S +A+ +Q M+
Sbjct: 496 -------LRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQE 548
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G P +I SVL AC + +L G +H R + +A +L+DMY+KC ID+
Sbjct: 549 AGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDE 608
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +VFH + K + + ++I L+ ++ EAL F+ + ++P+S+T SILSAC+
Sbjct: 609 AKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSH 668
Query: 512 IGALMCGKEIHA 523
G + G + A
Sbjct: 669 AGLVNEGLNLFA 680
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKM----CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
N+ + F++ G + A +F +M +L +W LI G A++GF EA+ +Q+M
Sbjct: 489 NSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM-Q 547
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++P + + VL C +P L G+ +H + R + V V +L+ MY KCG +
Sbjct: 548 EAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSID 607
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ VF M ++ +NAMIS Y +G+ ++ L LF +++ ++PD +T +S++SA
Sbjct: 608 EAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACS 667
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSV--CNPLIKMY 343
G G + F+D VS NP+++ Y
Sbjct: 668 HAGLVNEGLNL--------FADMVSKHNMNPIMEHY 695
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 261/485 (53%), Gaps = 8/485 (1%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN 100
SK + QV N+ +I N + L NG ++ +++ M+ DE +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWN--AMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+ C + G LH+V+ K ++ + NA + M+ K G L A F M D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN +I GY + + DEA +++RM GV PD + ++ C V +LKRG++ H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVQELKRGQQCH 534
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ G + ++LI MYVKCG ++ AR VF MP R+ +S NA+I+GY G
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY-TMGHLE 593
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPL 339
+ + LF ++ V + P +T + ++ + LGR++HG V+K GF S VC L
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSL 653
Query: 340 IKMYLSFGNREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
+ +Y++ + E +FS ++ K +V WT +IS Y +KA++ YQ M ++ +PD
Sbjct: 654 LCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPD 713
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ ASVL ACA + +L G ++H L TG + ++LIDMY+KC + +L+VF
Sbjct: 714 QAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFR 773
Query: 459 QIPDK-NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
++P + NVISW S+I+GL N + EAL F++M ++ P+ VT + +LSAC+ G +
Sbjct: 774 EMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVS 833
Query: 517 CGKEI 521
G+++
Sbjct: 834 EGRKV 838
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 261/539 (48%), Gaps = 44/539 (8%)
Query: 63 PNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWK-----RGYDEGLY 116
P S N + S +Q +K L+ E L IC+ + L + K +
Sbjct: 3 PQSPXNSIPNCVSNQQLVKNLNPHSEFLQICLQHCWRIQAHNLFDEKPKPVLQALSTAKV 62
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS K L LGN + ++VK G++ A F ++ +D+F+WN ++ Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F + + M W V+P+ +TF VL C G+ D+ G++VH V + G+
Sbjct: 123 FATVVQSFVCM-WNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQG 181
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI MY KC L ARLVFDG D +SW A+I+GY +G M+ + +F M+ V P
Sbjct: 182 GLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL +V++A Y++ G + K+F
Sbjct: 242 DQITLVTVVNA-----------------------------------YVALGRLADARKLF 266
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+++ + +VV+W MIS + ++A+ + ++ G ++ SVLSA A L L+
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLN 326
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H A + GL + + + L++MY+KC +D A +VF+ + ++N++ W +++ G
Sbjct: 327 YGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N + E + FF M + +P+ T SI SACA + L G ++H ++ A + F
Sbjct: 387 QNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ NAL+DMY + G +K A QF + D +WN ++ GY + A FR+M+ +
Sbjct: 447 VANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 243/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +V G L A +F ++ + ++ +WNV+I G+AK GF +EA+S + + G +K
Sbjct: 250 VNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG-LKAT 308
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ VL + L G VH + G + +V V +AL+ MY KC + A+ VF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ + WNAM+ G+ +NG + + F M+ PD T +S+ SA +
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++H +IK F+ ++ V N L+ MY G +E K F M+ D VSW +I Y
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+A ++ M + G +PDE+++AS++SACA + L G + H L ++ GL +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNL 495
++LIDMY KC + A +VF+ +P +NV+S ++I G + + EA+ F+++ M+ L
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGL 607
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAW 554
KP VT +L C L G++IH ++ G ++ + +LL +Y+ R +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSE 667
Query: 555 NQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + + + W L++GYA++ A +F++ M
Sbjct: 668 TLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 265/522 (50%), Gaps = 7/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+A+ + +++ + +L +++ + G +H+ +K +V +G
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVG 347
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A ++M+ K + A VF + +R++ WN ++GG+A+ G E + + M G
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCM-KRHGP 406
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD +TF + C + L G ++H +I+ + +++ V NAL+ MY K G L AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARK 466
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ M D +SWNA+I GY + + +F M V PD ++L+S++SA V +
Sbjct: 467 QFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE 526
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G++ H ++K+G + LI MY+ G VF M S++VVS +I+
Sbjct: 527 LKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L ++A+ +Q ++ G P E+T A +L C L+LG ++H M+ G +S
Sbjct: 587 YTMGHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645
Query: 434 I-IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++ +L+ +Y + + +F ++ K ++ WT++I G N +AL F++ M
Sbjct: 646 SEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
N+ P+ S+L ACA + +L G+EIH+ G D ++L+DMY +CG +
Sbjct: 706 RSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDV 765
Query: 551 KPAWNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKM 590
K + F R +V +WN ++ G A+ G A E F++M
Sbjct: 766 KGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM 807
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 230/483 (47%), Gaps = 38/483 (7%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E ++ C + + G +H V KT + M+ K L A VF
Sbjct: 141 NEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVF 200
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ D SW LI GY + GF EA+ ++ RM VG PD T
Sbjct: 201 DGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHA-PDQITL------------- 246
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
V VVNA YV G L AR +F +P + ++WN MISG+
Sbjct: 247 ------------------VTVVNA----YVALGRLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ G + + F+ +++ + +L SV+SA + G VH K G D+V
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+ MY + ++VF+ + +++V W M+ + + L + +E + M+
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G PDE T S+ SACA L L+ G +LH + ++ S + +AN L+DMY+K + +A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+ F + + +SW +II+G + EA FR+M+ N + P+ V+L SI+SACA +
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV 524
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L G++ H +++G+ ++L+DMYV+CG + A + F S R+V + N L+
Sbjct: 525 QELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALI 584
Query: 572 TGY 574
GY
Sbjct: 585 AGY 587
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 204/410 (49%), Gaps = 8/410 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE +L ++V C + G H ++ K S G++ + M+VK G + A VF
Sbjct: 510 DEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R++ S N LI GY G +EA+ L+Q + VG +KP TF +L C G L
Sbjct: 570 YSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVG-LKPTEVTFAGLLDGCDGAFML 627
Query: 214 KRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMIS 271
G+++H V+++G+ + ++V +L+ +Y+ V + +F + + + W A+IS
Sbjct: 628 NLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALIS 687
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + + K L + MR + PD +SV+ A + + G+E+H + GF+
Sbjct: 688 GYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNM 747
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKD-VVSWTTMISCYEGSVLPDKAVETYQMM 390
D C+ LI MY G+ + +VF M ++ V+SW +MI + ++A+E ++ M
Sbjct: 748 DEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM 807
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKC 449
E + +PDE+T VLSAC+ G + G K+ L + L + ++D+ +
Sbjct: 808 EQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGF 867
Query: 450 IDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+++A E +++ K + + W++++ R + K+M LKP
Sbjct: 868 LNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLM-ELKPQ 916
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 245/465 (52%), Gaps = 6/465 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + +++F D + VF M R++ SWN +I G+ G +AL LY M +
Sbjct: 199 VGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSML-IE 256
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K D T V++ C L+ G ++H I+F D+ ++NAL+ MY G L +
Sbjct: 257 GIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESS 316
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ +P D WN+MIS Y G + + + LFI MR + D T++ ++S +
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376
Query: 312 GDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D + GR +H + +K G D + N L+ MY+ + VF +M DV+SW TM
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTM 436
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + S+ KA E + MM + TI S+L+ C +L G +H A++ GL
Sbjct: 437 ISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGL 496
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +L +MY C A +F + P ++++SW S+I N+ + +AL+ F
Sbjct: 497 EINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNH 556
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGFLPNALLDMYVRCG 548
M+ L+PNSVT+++IL++C ++ L G+ +HA+ R + + D L NA + MY RCG
Sbjct: 557 MISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG 616
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+++ A F + R + +WN ++TGY G+G A F +M+D
Sbjct: 617 KLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 264/526 (50%), Gaps = 9/526 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +ALK SM I D ++ +++ C G+ LH + K + +
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+M+ G L +W +F + D WN +I Y GF EA++L+ +M + +
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM-RLERI 359
Query: 194 KPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K DV T +L C + D G+ +H H ++ G E D + NAL++MYVK + A+
Sbjct: 360 KEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQ 419
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ M D ISWN MIS + ++ K LF+MM E + + T+ S+++ +
Sbjct: 420 YVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGS 479
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR +HG+ IK G + S+ L +MY++ G+ +F+R +D+VSW ++IS
Sbjct: 480 DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLIS 539
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR--TGL 430
Y + KA+ + M +E P+ +TI ++L++C L +L LG LH R L
Sbjct: 540 SYIKNDNAGKALLLFNHMISELE-PNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSL 598
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+AN I MY++C + A ++F + ++++SW ++I G ++ R +A + F +
Sbjct: 599 EMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQ 658
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + KPN+V+ S+LSAC+ G + G ++ H+ G+A ++D+ R G
Sbjct: 659 MLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGG 718
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A NS E D S W LL+ + L E F K+++
Sbjct: 719 HFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVE 764
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 239/451 (52%), Gaps = 8/451 (1%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I + K LS Y +M +G + PD T P VL+ CG + + G +H +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLG-ITPDSATMPLVLKACGRLNAIGNGVRIHSFI 86
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
DV V AL+ Y KCG + A VF MP+RD +SWNA+ISGY Y + +
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAV 146
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKM 342
+LF+ M++ + P+ T+ +++ A + + +LG+E+HGY ++ G D D V L+
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y+ F + +VFS M +++VSW +I+ + KA++ Y M EG D +T+
Sbjct: 207 YMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
V+ ACA G L LG++LHQLA++ LI+ + I N L++MYS ++ + +F+ +P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG-ALMCGKE 520
+ W S+I EA+ F KM L +K + T+ +LS C + + G+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+HAHA++ G+ D +L NALL MYV+ ++ A F DV +WN +++ +A+
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445
Query: 580 GALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A A E F M +S K N ++ L C+
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 255/519 (49%), Gaps = 10/519 (1%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L M+ L I D + +++ C G+ +HS + VR+G A +
Sbjct: 45 LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDF 104
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ K G + A VF +M +RDL SWN LI GY + EA+ L+ M G+ P+ T
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEM-KKAGLTPNSRT 163
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L CG + +L+ G+E+H + +R G ++ D V AL+ Y++ D V + VF M
Sbjct: 164 VVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLM 222
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
R+ +SWNA+I+G+ G+ K L L+ M + D +T+ VI A G +LG
Sbjct: 223 LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H IK +D+ + N L+ MY G+ E +F+ + + D W +MIS Y G
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL-GIKLHQLAMRTGLISYIIIA 437
+A+ + M E D TIA +LS C L + + G LH AM++G+ +
Sbjct: 343 FHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLG 402
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---LNNRSFEALIFFRKMMLN 494
N L+ MY K I A VF ++ +VISW ++I ++FE +F
Sbjct: 403 NALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE--LFLMMCESE 460
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+K NS T+VS+L+ C L+ G+ IH A++ G+ + L +L +MY+ CG + A
Sbjct: 461 IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT 520
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N F +RD+ +WN L++ Y + A F MI
Sbjct: 521 NMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS 559
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A + M E I + +V+L+ C+ G +H K ++ L +
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M++ GD A +F + RDL SWN LI Y K +AL L+ M + ++P+
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM--ISELEPNS 565
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRARLVF 255
T +L +C + L G+ +H + R E D + NA ITMY +CG L A +F
Sbjct: 566 VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIF 625
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ R +SWNAMI+GY +G + F M + P+ ++ +SV+SA G
Sbjct: 626 CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTV 685
Query: 316 LGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI-S 372
G ++ H V G + ++ ++ + G+ E + M D W ++ S
Sbjct: 686 TGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745
Query: 373 CYEGSVLPDKAVETY--QMMEAEGSMPDEITIASVLSACACL 412
C S +K +ET +++E E S P + S + A A L
Sbjct: 746 CQIKS--NNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGL 785
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 245/465 (52%), Gaps = 6/465 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + +++F D + VF M R++ SWN +I G+ G +AL LY M +
Sbjct: 199 VGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSML-IE 256
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K D T V++ C L+ G ++H I+F D+ ++NAL+ MY G L +
Sbjct: 257 GIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESS 316
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ +P D WN+MIS Y G + + + LFI MR + D T++ ++S +
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376
Query: 312 GDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D + GR +H + +K G D + N L+ MY+ + VF +M DV+SW TM
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTM 436
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + S+ KA E + MM + TI S+L+ C +L G +H A++ GL
Sbjct: 437 ISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGL 496
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +L +MY C A +F + P ++++SW S+I N+ + +AL+ F
Sbjct: 497 EINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNH 556
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGFLPNALLDMYVRCG 548
M+ L+PNSVT+++IL++C ++ L G+ +HA+ R + + D L NA + MY RCG
Sbjct: 557 MISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG 616
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+++ A F + R + +WN ++TGY G+G A F +M+D
Sbjct: 617 KLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD 661
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 264/526 (50%), Gaps = 9/526 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +ALK SM I D ++ +++ C G+ LH + K + +
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+M+ G L +W +F + D WN +I Y GF EA++L+ +M + +
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM-RLERI 359
Query: 194 KPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K DV T +L C + D G+ +H H ++ G E D + NAL++MYVK + A+
Sbjct: 360 KEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQ 419
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ M D ISWN MIS + ++ K LF+MM E + + T+ S+++ +
Sbjct: 420 YVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGS 479
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR +HG+ IK G + S+ L +MY++ G+ +F+R +D+VSW ++IS
Sbjct: 480 DLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLIS 539
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR--TGL 430
Y + KA+ + M +E P+ +TI ++L++C L +L LG LH R L
Sbjct: 540 SYIKNDNAGKALLLFNHMISELE-PNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSL 598
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+AN I MY++C + A ++F + ++++SW ++I G ++ R +A + F +
Sbjct: 599 EMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQ 658
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + KPN+V+ S+LSAC+ G + G ++ H+ G+A ++D+ R G
Sbjct: 659 MLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGG 718
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A NS E D S W LL+ + L E F K+++
Sbjct: 719 HFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVE 764
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 239/451 (52%), Gaps = 8/451 (1%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I + K LS Y +M +G + PD T P VL+ CG + + G +H +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLG-ITPDSATMPLVLKACGRLNAIGNGVRIHSCI 86
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
DV V AL+ Y KCG + A VF MP+RD +SWNA+ISGY Y + +
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAV 146
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKM 342
+LF+ M++ + P+ T+ +++ A + + +LG+E+HGY ++ G D D V L+
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y+ F + +VFS M +++VSW +I+ + KA++ Y M EG D +T+
Sbjct: 207 YMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
V+ ACA G L LG++LHQLA++ LI+ + I N L++MYS ++ + +F+ +P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG-ALMCGKE 520
+ W S+I EA+ F KM L +K + T+ +LS C + + G+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+HAHA++ G+ D +L NALL MYV+ ++ A F DV +WN +++ +A+
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMF 445
Query: 580 GALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A A E F M +S K N ++ L C+
Sbjct: 446 RAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 255/519 (49%), Gaps = 10/519 (1%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L M+ L I D + +++ C G+ +HS + VR+G A +
Sbjct: 45 LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDF 104
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ K G + A VF +M +RDL SWN LI GY + EA+ L+ M G+ P+ T
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEM-KKAGLTPNSRT 163
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L CG + +L+ G+E+H + +R G ++ D V AL+ Y++ D V + VF M
Sbjct: 164 VVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLM 222
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
R+ +SWNA+I+G+ G+ K L L+ M + D +T+ VI A G +LG
Sbjct: 223 LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H IK +D+ + N L+ MY G+ E +F+ + + D W +MIS Y G
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL-GIKLHQLAMRTGLISYIIIA 437
+A+ + M E D TIA +LS C L + + G LH AM++G+ +
Sbjct: 343 FHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLG 402
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---LNNRSFEALIFFRKMMLN 494
N L+ MY K I A VF ++ +VISW ++I ++FE +F
Sbjct: 403 NALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFE--LFLMMCESE 460
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+K NS T+VS+L+ C L+ G+ IH A++ G+ + L +L +MY+ CG + A
Sbjct: 461 IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT 520
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N F +RD+ +WN L++ Y + A F MI
Sbjct: 521 NMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS 559
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 11/342 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A + M E I + +V+L+ C+ G +H K ++ L +
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M++ GD A +F + RDL SWN LI Y K +AL L+ M + ++P+
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM--ISELEPNS 565
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRARLVF 255
T +L +C + L G+ +H + R E D + NA ITMY +CG L A +F
Sbjct: 566 VTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIF 625
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ R +SWNAMI+GY +G + F M + P+ ++ +SV+SA G
Sbjct: 626 CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTV 685
Query: 316 LGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI-S 372
G ++ H V G + ++ ++ + G+ E + M D W ++ S
Sbjct: 686 TGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745
Query: 373 CYEGSVLPDKAVETY--QMMEAEGSMPDEITIASVLSACACL 412
C S +K +ET +++E E S P + S + A A L
Sbjct: 746 CQIKS--NNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGL 785
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 262/515 (50%), Gaps = 7/515 (1%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L +A+ L + + + D V +++ C ++ +H + K+ + + N
Sbjct: 8 TLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
L ++++ G L A VF + + SWN +I GY + ++A+ L++ M GV+
Sbjct: 68 NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCH-EGVQ 126
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P+ T+ +L+ C + LK GKEVH + G E+DV V AL+ MY KCG + AR +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + D ISW MI Y ++G + L + M + P+ +T S+++A G
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K + VH + + G DV V L++MY G+ ++ VF RM+ +DVVSW MI +
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+A + + M+ EG PD I S+L+ACA G L+ K+H+ A+ +GL +
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV 366
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ L+ MYSK ID A VF ++ +NV+SW ++I GL + +AL FR+M +
Sbjct: 367 RVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAH 426
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKP 552
+KP+ VT V++LSAC+ G + G+ + ++ G+ D N ++D+ R GR+
Sbjct: 427 GVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME 486
Query: 553 AWNQFNSN---ERDVSAWNILLTGYAERGQGALAE 584
A F N + D + W LL G L E
Sbjct: 487 A-KLFIDNMAVDPDEATWGALLGSCRTYGNVELGE 520
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 213/401 (53%), Gaps = 2/401 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ D + + VL+ C DL K+VH +I+ E + V+N L+ +Y++CG L A
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD + K+ SWNAMI+GY E+ + LF M V P+ T ++ A +
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
K G+EVH + G DV V L++MY G+ E ++F + + D++SWT MI
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y S +A ME EG P+ IT S+L+ACA G L ++H+ A+ GL
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+ MY+K ID A VF ++ ++V+SW +I + R EA F +M
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
KP+++ +SIL+ACA GAL K+IH HAL G+ D + AL+ MY + G +
Sbjct: 323 QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSI 382
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ + R+V +WN +++G A+ G G A E FR+M
Sbjct: 383 DDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM 423
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
N S ++ ++ L +S V +L C + LM K++H ++ + + +
Sbjct: 7 NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N LL +Y+ CGR++ A F++ ++ ++WN ++ GY E A FR+M
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREM 120
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 257/468 (54%), Gaps = 6/468 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + M+ K G++ A V+ KM D + N LI YA+ GFF +A ++ ++ +G
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMG-T 210
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ YT+ +L CG + ++ GK++H HV++ Y ++ V NAL+T+Y KCG + A +
Sbjct: 211 RPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEI 270
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + +R+ ISW A I+G++++G++ K L F MMRE ++P+ T S V+++ V D
Sbjct: 271 VFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKD 330
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMIS 372
GR H VIK G + V V +I MY G +E EK F +M + VSW +I+
Sbjct: 331 FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIA 390
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +KA+E + M E +E T +++ AC+ +L +++H +++ + S
Sbjct: 391 GYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVES 450
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ +A++LI+ Y++C ++ A++VF QI D +V+SW SII N ++A+ RKM+
Sbjct: 451 NLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMI 510
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRM 550
KP S T +++LSAC+ G + G+E ++ + + + ++D+ R G++
Sbjct: 511 EEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQL 570
Query: 551 KPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+ A + + + S W LL +AE K++D + N
Sbjct: 571 ENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPN 618
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 231/455 (50%), Gaps = 40/455 (8%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S + + G L +A +F K+ + ++ W VL G A+ GF++EALS + M G++P
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEM-QKEGLRP 902
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ + P +L+ CG + D + G+ +H +++ +E+D +++ALI MY KCG + +A VF
Sbjct: 903 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 962
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + +D + NAM+SGY ++G + L L M++ V P+ ++ +++I+ VGD+
Sbjct: 963 DWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKS 1022
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+ EV + G DVVSWT++IS +
Sbjct: 1023 MVSEVFRLMTANGV-------------------------------EPDVVSWTSVISGFV 1051
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ + + ++ M +G P +TI+S+L AC + NL G ++H AM G+ +
Sbjct: 1052 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY 1111
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ + L+DMY+KC I +A +F+ +P++N ++W S+I G + EA+ F +M +
Sbjct: 1112 VRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESD 1171
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHA---HALRIGVAFDGFLPNALLDMYVRCGRMK 551
K + +T ++L+AC+ G + G+ + RI + + ++D+ R G++
Sbjct: 1172 TKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYA--CMVDLLGRAGKLS 1229
Query: 552 PAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
A++ + E D W LL G LAE
Sbjct: 1230 EAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAE 1264
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 223/430 (51%), Gaps = 7/430 (1%)
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G +AGFF + + + GG Y F L CG ++ G+ H V++ G
Sbjct: 89 GVKEAGFFTRNETPHVE--FGGGFPHRQYVFS-ALSFCGREGCVELGRRWHCFVVKIGLG 145
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+D V +LI MY KCG++ A V+D M D + N +IS Y NG +++ +F+ +
Sbjct: 146 SDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQI 205
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ P+ T S++++ + + G+++H +V+KM + + +V N L+ +Y G
Sbjct: 206 GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMM 265
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE E VF + ++++SWT I+ + KA++ + MM G P+E T + VL++C
Sbjct: 266 EEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISW 468
C+ + G H ++ G+ S + + +IDMYS +D+A + F Q+ + +SW
Sbjct: 326 GCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSW 385
Query: 469 TSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
++I G LN + +A+ F +M+ ++ N T +I AC+ +L +IH+ ++
Sbjct: 386 NALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK 445
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
V + + ++L++ Y +CG ++ A F ++ DV +WN ++ Y++ G A
Sbjct: 446 SNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFL 505
Query: 587 FRKMIDSKGN 596
RKMI+ +GN
Sbjct: 506 LRKMIE-EGN 514
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 215/456 (47%), Gaps = 7/456 (1%)
Query: 56 SSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL 115
+S+ N ++ NG QA + + + + ++ +C EG
Sbjct: 175 TSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGK 234
Query: 116 YLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
LH+ V K M +LS +GNA L+++ K G + A VF + R++ SW I G+ +
Sbjct: 235 QLHAHVVK-MQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQH 293
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G F +AL + M G++P+ +TF VL +CG V D G+ H VI+ G + V V
Sbjct: 294 GDFKKALKQFS-MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFV 352
Query: 235 VNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
A+I MY G++ A F M + +SWNA+I+GY N + K + F M +
Sbjct: 353 GTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKED 412
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V + T S++ A ++H +IK ++ V + LI+ Y G+ E
Sbjct: 413 VACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAV 472
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF+++ DVVSW ++I Y + P KA+ + M EG+ P T +VLSAC+ G
Sbjct: 473 QVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSG 532
Query: 414 NLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSI 471
+ G + + + + + ++D+ + ++ AL+ ++ K S W +
Sbjct: 533 LVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPL 592
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ R N+ + + + + +L+L+PN T+ LS
Sbjct: 593 LAACRYNS-NLQMAEYVAEKILDLEPNDATVYVTLS 627
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 214/482 (44%), Gaps = 56/482 (11%)
Query: 31 YFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNE-LCLNGS------LEQALKYL 83
YF K F ++ Q N + K PN+ + + L G+ E+AL
Sbjct: 839 YFAAKLMSFYTECGQ------LSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAF 892
Query: 84 DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKF 143
MQ+ + ++ L ++++ C G +H+V+ K + +A + M+ K
Sbjct: 893 SEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKC 952
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G + A VF + D+DL N ++ GYA+ GF EAL L Q+M GVKP+V ++
Sbjct: 953 GHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKM-QQAGVKPNVVSW--- 1008
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP---- 259
N LI + + GD VF M
Sbjct: 1009 --------------------------------NTLIAGFSQVGDKSMVSEVFRLMTANGV 1036
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ D +SW ++ISG+ +N +G F M + P +T+SS++ A V + + G+E
Sbjct: 1037 EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 1096
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+HGY + +G DV V + L+ MY G E + +F M ++ V+W ++I Y
Sbjct: 1097 IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGY 1156
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIAN 438
++A+E + ME + D +T +VL+AC+ G ++LG L ++ + + +
Sbjct: 1157 CNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYA 1216
Query: 439 TLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++D+ + + +A ++ +P + + W + +LG N+ + E + + L+P
Sbjct: 1217 CMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGA-LLGACRNHGNIELAEVAAEHLFELEP 1275
Query: 498 NS 499
S
Sbjct: 1276 ES 1277
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 218/531 (41%), Gaps = 49/531 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + LN +E+A++ M + ++ +E N+ + C + +HS + K
Sbjct: 386 NALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK 445
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ + ++ + + + G L +A VF ++ D D+ SWN +I Y++ G +A+ L
Sbjct: 446 SNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFL 505
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
++M G KP TF VL C ++ G+E +++ + + + + ++ +
Sbjct: 506 LRKMIEEGN-KPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564
Query: 243 VKCGDLVRARLVFDGMPKRDRIS-WNAMISG--YFEN---GEYMKGLMLFIMMREVLVDP 296
+ G L A + + S W +++ Y N EY+ +L + + V
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATV-- 622
Query: 297 DFMTLSSVISASELVGDEKLGREV--HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
++TLS++ + D + R + + K + V N + K + E K
Sbjct: 623 -YVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPK 681
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI---ASVLSACAC 411
V+ ++ K +V I G P T ++ E P E I + L+ C
Sbjct: 682 VYEKL--KQLVRQIQDI----GYSPP-----TTTVLHPESRQPKEQLILYHSEKLAVCFG 730
Query: 412 LGNLDLGIKLHQLA-MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L +L G + L +R L D YS K I + + + P + S
Sbjct: 731 LLSLPPGKPIRVLKNLRVCL-----------DCYSTMKYISRITDRYIPTPLAAAAAMQS 779
Query: 471 IILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I NR+ +R + + + +S T + AR AL G+ +HAH + I
Sbjct: 780 LI------NRA-NVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVII 832
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
G+A + L+ Y CG++ A F+ ++ W +L A RG
Sbjct: 833 GLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRG 883
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 249/471 (52%), Gaps = 3/471 (0%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M H ++ N + ++K G+L A +F M R +W +LIGGYA+ F EA L+
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G+ PD + +L + ++VH HVI+ GY++ + V N+L+ Y K
Sbjct: 187 IEM-GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK 245
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
L A +F+ +P+RD +++NA+++GY + G + + LF M+EV P T +++
Sbjct: 246 TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAI 305
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++A + D + G++VHG+V+K F +V V N L+ Y E K+F M D
Sbjct: 306 LTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+S+ +++CY + +++E ++ ++ G A++LS A NLD+G ++H
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ T IS I++ N+L+DMY+KC +A +F + ++ + WT++I +
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F +M + ++ T SI+ ACA + +L GK++H+H + G + F +AL+DM
Sbjct: 486 LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDM 545
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
Y +CG +K A F R+ +WN L++ YA+ G G F +M+ S
Sbjct: 546 YAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRS 596
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 243/487 (49%), Gaps = 11/487 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A M I D +L L+ +E +HS V K ++ +
Sbjct: 176 NNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVV 235
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ L + K LG A+ +F + +RD ++N L+ GY+K GF EA++L+ +M V G
Sbjct: 236 SNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEV-G 294
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P +TF +L + D++ G++VH V++ + +V V NAL+ Y K +V A
Sbjct: 295 YRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEAS 354
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F MP+ D IS+N +++ Y NG + L LF ++ D ++++S + +
Sbjct: 355 KLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 414
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +GR++H I ++ V N L+ MY G E ++FS + + V WT MIS
Sbjct: 415 NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMIS 474
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y L + ++ + M+ D T AS++ ACA L +L LG +LH + +G IS
Sbjct: 475 SYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS 534
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+DMY+KC I AL++F ++P +N +SW ++I N L F +M+
Sbjct: 535 NVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMV 594
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVR 546
+ L+P+SV+L+SIL AC+ G + G + RI +P + +DM R
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIY----KLVPKKEHYASTIDMLCR 650
Query: 547 CGRMKPA 553
GR A
Sbjct: 651 GGRFDEA 657
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 181/361 (50%), Gaps = 3/361 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K +V + NA L + K + A +F +M + D S+NVL+ YA
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAW 377
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G E+L L++ + + G + + + F +L +L G+++H I +++
Sbjct: 378 NGRVKESLELFKELQFTGFDRRN-FPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL 436
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KCG+ A +F + + + W AMIS Y + G + GL LF+ M+
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D T +S++ A + LG+++H ++I G+ +V + L+ MY G+ ++
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++F M ++ VSW +IS Y + D + ++ M G PD +++ S+L AC+ G
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616
Query: 414 NLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G++ R L+ + IDM + D+A ++ Q+P + + I W+S+
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSV 676
Query: 472 I 472
+
Sbjct: 677 L 677
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 195/427 (45%), Gaps = 33/427 (7%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
PC + K V +I+ G+ + N L+ +++ GDL AR +FD MP
Sbjct: 70 PCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPH 129
Query: 261 RDRISWNAMISGYF-------------------------------ENGEYMKGLMLFIMM 289
++ S N MI GY +N ++ + LFI M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+DPD ++L++++S R+VH +VIK+G+ + V N L+ Y +
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
++F+ + +D V++ +++ Y +A+ + M+ G P E T A++L+A
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L +++ G ++H ++ + + +AN L+D YSK + +A ++F+++P+ + IS+
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++ N R E+L F+++ + ++LS A L G++IH+ +
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFF 587
+ + N+L+DMY +CG A F+ S W +++ Y ++G + F
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489
Query: 588 RKMIDSK 594
+M +K
Sbjct: 490 VEMQRAK 496
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 164/452 (36%), Gaps = 110/452 (24%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++++L+ +Q L+ + D G +HS T + + +
Sbjct: 378 NGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILV 437
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ + M+ K G+ G A +F + + W +I Y + G ++ L L+ M
Sbjct: 438 GNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEM-QRAK 496
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV-----------------DVV 235
+ D T+ ++R C + L GK++H H+I GY ++V D +
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556
Query: 236 --------------NALITMYVKCGD----------LVRARL------------------ 253
NALI+ Y + GD +VR+ L
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616
Query: 254 -------VFDGM-------PKRDRISWNAMI---SGYFENGEYMKGLMLFIMMREVLVDP 296
FD M PK++ + + G F+ E + M F +P
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPF--------EP 668
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D + SSV+++ + +++L ++ + M D + + +Y + G + KV
Sbjct: 669 DEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVK 728
Query: 357 SRMESKDV-----VSWT-----TMISCYEGSVLPD------KAVETYQMMEAEGSMPDEI 400
M + V SW T + P K E + M +G PD
Sbjct: 729 KAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPD-- 786
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
S+CA L N+D +K+ L + I+
Sbjct: 787 ------SSCA-LHNVDEEVKVESLKYHSERIA 811
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 229/431 (53%), Gaps = 15/431 (3%)
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F +A+S Y M GV PD + FP VL+ G+ DL GK++H HV +FG V N
Sbjct: 66 FHQAISTYTNMV-TAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPN 124
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY KCGD+ AR VFD + RD +SWN+MI+ E+ + LF +M V P
Sbjct: 125 SLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGP 184
Query: 297 DFMTLSSVISA-SELVGDEKLGREVHGYVIKMG----FSDDVSVCNPLIKMYLSFGNREE 351
TL SV A S L+ LG++VH +V++ G F++ N L+ MY G E
Sbjct: 185 TSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTN-----NALVTMYAKLGRVYE 239
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+ +F + KD+VSW T+IS + ++A+ +M G P+ +T+ASVL AC+
Sbjct: 240 AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299
Query: 412 LGNLDLGIKLHQLA-MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L L G ++H M LI + L+DMY CK +K VF + + + W +
Sbjct: 300 LEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNA 359
Query: 471 IILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G N +EA+ F +M+ L L PNSVTL S+L AC R + + + IH+ ++
Sbjct: 360 MIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKW 419
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G D ++ NAL+DMY R GR++ A + F S N +D+ +WN ++TGY G+ A
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479
Query: 588 RKMIDSKGNWR 598
M + R
Sbjct: 480 HDMQRGQAEHR 490
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 276/552 (50%), Gaps = 27/552 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+ + QA+ +M + D A +++ + + G LH+ V K L +
Sbjct: 63 SSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAV 122
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ ++M+ K GD+ A VF ++ +RD SWN +I + ++ A+ L+ R+ +
Sbjct: 123 PNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLF-RLMLLEN 181
Query: 193 VKPDVYTFPCVLRTCGG-VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P +T V C + L GK+VH V+R G + NAL+TMY K G + A
Sbjct: 182 VGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEA 240
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ +FD +D +SWN +IS +N + + L+ +M + V P+ +TL+SV+ A +
Sbjct: 241 KTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL 300
Query: 312 GDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+E+H +V+ ++ V L+ MY + E+G VF M + + W M
Sbjct: 301 EMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAM 360
Query: 371 ISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRT 428
I+ Y + +A+E + M E G P+ +T++SVL AC C LD +H ++
Sbjct: 361 IAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKE-GIHSCVVKW 419
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + N L+DMYS+ I+ A +F + K+++SW ++I G + R +AL
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479
Query: 489 RKMM-------------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
M LKPNSVTL+++L CA + AL GKEIHA+A++
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM 539
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
++ D + +AL+DMY +CG + + F + R+V WN+L+ Y G+G A + FR
Sbjct: 540 LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFR 599
Query: 589 KMIDSKGNWRKL 600
+M++ N R++
Sbjct: 600 RMVEEGDNNREI 611
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 209/462 (45%), Gaps = 28/462 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L N E+AL YL M + + + L +++ C G +H+ V
Sbjct: 256 NTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLM 315
Query: 124 TMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ +G A + M+ VF M R + WN +I GY + F EA+
Sbjct: 316 NNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIE 375
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M + G+ P+ T VL C + +H V+++G+E D V NAL+ MY
Sbjct: 376 LFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMY 435
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM------------- 289
+ G + AR +F M ++D +SWN MI+GY G + L L M
Sbjct: 436 SRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFD 495
Query: 290 -----REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ + P+ +TL +V+ + G+E+H Y +K S DV+V + L+ MY
Sbjct: 496 DYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYA 555
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS-----MPDE 399
G VF +M ++V++W +I Y ++A++ ++ M EG P+E
Sbjct: 556 KCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNE 615
Query: 400 ITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T ++ ++ + G +D G+ L + + + G+ L+D+ + I++A +
Sbjct: 616 VTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIK 675
Query: 459 QIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+P K V +W+S++ ++ +++ E K + L PN
Sbjct: 676 TMPSNMKKVDAWSSLLGACKI-HQNLEIGEIAAKNLFVLDPN 716
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 268/534 (50%), Gaps = 21/534 (3%)
Query: 74 GSLEQAL-----KYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
GS E L K+ M I D+ A +++ C + G +H+ +
Sbjct: 141 GSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFAT 200
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + + L+M+ K G + +++VF M + + SWN +I G G EA L+ RM
Sbjct: 201 HIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRM- 259
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G P++YT V + G + D+ GKEV G E +V V ALI MY KCG L
Sbjct: 260 KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSL 319
Query: 249 VRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
AR VFD + WNAMISGY ++G + L L++ M + + D T SV +
Sbjct: 320 HDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFN 379
Query: 307 ASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + GR VHG V+K G VSV N + Y G E+ KVF RME +D+V
Sbjct: 380 AIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIV 439
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTT+++ Y S L ++A+ T+ +M EG P++ T +SVL +CA L L+ G ++H L
Sbjct: 440 SWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 499
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ GL + I + LIDMY+KC I +A +VF +I + +++SWT+II G + +AL
Sbjct: 500 CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDAL 559
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----A 539
FR+M L+ +K N+VTL+ +L AC+ G + G + + G G +P
Sbjct: 560 QLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMEDGY---GVVPEMEHYAC 615
Query: 540 LLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++D+ R GR+ A E + W LL G G L E RK++
Sbjct: 616 IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKIL 669
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/570 (27%), Positives = 283/570 (49%), Gaps = 18/570 (3%)
Query: 50 LNTQNTSSIATKNPN--SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
++ T S+A P+ ++ +++ + + +++ ++ Q+ + L++++R C
Sbjct: 21 VSNNRTGSLAVSVPSQTAKKSKIVVGRNRPESIGISETYQQTQV----QDLIDVLRDCAE 76
Query: 108 KRGYDEGLYLHSVVSKTM---SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
K E +H +V K+ L V +A ++ K + A VF +M R++FSW
Sbjct: 77 KGSIREAKAVHGLVLKSNFEDKDLMVLFNHA-AHVYSKCSEFRAACGVFDEMPQRNVFSW 135
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
V+I G + G F + + M G+ PD + + ++++C G+ L+ GK VH ++
Sbjct: 136 TVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIV 194
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G+ + V +L+ MY K G + + VF+ M + +++SWNAMISG NG +++
Sbjct: 195 MRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFD 254
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF+ M+ P+ TL SV A + D +G+EV ++G +V V LI MY
Sbjct: 255 LFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYS 314
Query: 345 SFGNREEGEKVFSR--MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
G+ + VF + W MIS Y S +A+E Y M G D T
Sbjct: 315 KCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 374
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
SV +A A +L G +H + ++ GL + + + N + D YSKC ++ +VF ++
Sbjct: 375 CSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 434
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
+++++SWT+++ ++ EAL F M PN T S+L +CA + L G++
Sbjct: 435 ERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ 494
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+H + G+ + + +AL+DMY +CG + A F+ + D+ +W +++GYA+ G
Sbjct: 495 VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGL 554
Query: 580 GALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A + FR+M S K N L+ + C
Sbjct: 555 VEDALQLFRRMELSGIKANAVTLLCVLFAC 584
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 285/571 (49%), Gaps = 14/571 (2%)
Query: 48 QVLNTQNT-SSIATKN-PNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRL 104
Q+L T + S+I T+ N +N LC + +AL+ D Q+ + + ++L+
Sbjct: 17 QILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICA 76
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C R +G +H + + L N LSM+ K G L A VF M +R+L S+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
+I GY++ G EA+ LY +M V PD + F +++ C D+ GK++H VI
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL- 283
+ + + NALI MYV+ + A VF G+P +D ISW+++I+G+ + G + L
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
L M+ + P+ S + A + G ++HG IK + + L MY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G +VF ++E D SW +I+ + D+AV + M + G +PD I++
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK---CIDKALEVFHQI 460
S+L A L G+++H ++ G ++ + + N+L+ MY+ C C E F
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
D +SW +I+ + + E L F+ M+++ +P+ +T+ ++L C I +L G
Sbjct: 436 ADS--VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++H ++L+ G+A + F+ N L+DMY +CG + A F+S + RDV +W+ L+ GYA+ G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 579 QGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G A F++M + + N +G+ C
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 267/519 (51%), Gaps = 7/519 (1%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG +A++ YL +QE ++ D+ A ++++ C G LH+ V K S +
Sbjct: 146 NGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+V+F + A VF + +DL SW+ +I G+++ GF EALS + M G
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
P+ Y F L+ C + G ++H I+ + +L MY +CG L A
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD + + D SWN +I+G NG + + +F MR PD ++L S++ A
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
G ++H Y+IK GF D++VCN L+ MY + +F + D VSW T+
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTI 444
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
++ P + + +++M PD IT+ ++L C + +L LG ++H +++TGL
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL 504
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I N LIDMY+KC + +A +F + +++V+SW+++I+G + EALI F++
Sbjct: 505 APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVRCG 548
M ++PN VT V +L+AC+ +G + G +++A G++ + ++D+ R G
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
R+ A + E DV W LL+ +G LA++
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 268/534 (50%), Gaps = 21/534 (3%)
Query: 74 GSLEQAL-----KYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
GS E L K+ M I D+ A +++ C + G +H+ +
Sbjct: 195 GSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFAT 254
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + + L+M+ K G + +++VF M + + SWN +I G G EA L+ RM
Sbjct: 255 HIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRM- 313
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G P++YT V + G + D+ GKEV G E +V V ALI MY KCG L
Sbjct: 314 KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSL 373
Query: 249 VRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
AR VFD + WNAMISGY ++G + L L++ M + + D T SV +
Sbjct: 374 HDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFN 433
Query: 307 ASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + GR VHG V+K G VSV N + Y G E+ KVF RME +D+V
Sbjct: 434 AIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIV 493
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTT+++ Y S L ++A+ T+ +M EG P++ T +SVL +CA L L+ G ++H L
Sbjct: 494 SWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 553
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ GL + I + LIDMY+KC I +A +VF +I + +++SWT+II G + +AL
Sbjct: 554 CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDAL 613
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----A 539
FR+M L+ +K N+VTL+ +L AC+ G + G + + G G +P
Sbjct: 614 QLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMEDGY---GVVPEMEHYAC 669
Query: 540 LLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++D+ R GR+ A E + W LL G G L E RK++
Sbjct: 670 IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKIL 723
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 284/569 (49%), Gaps = 16/569 (2%)
Query: 32 FKPKTRHFSS--KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
F +T+ FS+ + Q + + + +++ + ++ +++ + + +++ ++ Q+
Sbjct: 57 FLHETQCFSTAPRTVQKIDWVVLTGSLAVSVPSQTAKKSKIVVGRNRPESIGISETYQQT 116
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM---SHLSVRLGNAFLSMFVKFGDL 146
+ L++++R C K E +H +V K+ L V +A ++ K +
Sbjct: 117 QV----QDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHA-AHVYSKCSEF 171
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF +M R++FSW V+I G + G F + + M G+ PD + + ++++
Sbjct: 172 RAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKFAYSAIIQS 230
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C G+ L+ GK VH ++ G+ + V +L+ MY K G + + VF+ M + +++SW
Sbjct: 231 CIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSW 290
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
NAMISG NG +++ LF+ M+ P+ TL SV A + D +G+EV +
Sbjct: 291 NAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASE 350
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTTMISCYEGSVLPDKAV 384
+G +V V LI MY G+ + VF + W MIS Y S +A+
Sbjct: 351 LGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEAL 410
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDM 443
E Y M G D T SV +A A +L G +H + ++ GL + + + N + D
Sbjct: 411 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 470
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC ++ +VF ++ +++++SWT+++ ++ EAL F M PN T
Sbjct: 471 YSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTF 530
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
S+L +CA + L G+++H + G+ + + +AL+DMY +CG + A F+ +
Sbjct: 531 SSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN 590
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
D+ +W +++GYA+ G A + FR+M
Sbjct: 591 PDIVSWTAIISGYAQHGLVEDALQLFRRM 619
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 261/485 (53%), Gaps = 8/485 (1%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN 100
SK + QV N+ +I N + L NG ++ +++ M+ DE +
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWN--AMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+ C + G LH+V+ K ++ + NA + M+ K G L A F M D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN +I GY + + DEA +++RM GV PD + ++ C V +LKRG++ H
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVQELKRGQQCH 534
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ G + ++LI MYVKCG ++ AR VF MP R+ +S NA+I+GY G
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY-TMGHLE 593
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPL 339
+ + LF ++ V + P +T + ++ + LGR++HG V+K GF S VC L
Sbjct: 594 EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSL 653
Query: 340 IKMYLSFGNREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
+ +Y++ + E +FS ++ K +V WT +IS Y +KA++ YQ M ++ +PD
Sbjct: 654 LCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPD 713
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ ASVL ACA + +L G ++H L TG + ++LIDMY+KC + +L+VF
Sbjct: 714 QAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFR 773
Query: 459 QIPDK-NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
++P + NVISW S+I+GL N + EAL F++M ++ P+ VT + +LSAC+ G +
Sbjct: 774 EMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVS 833
Query: 517 CGKEI 521
G+++
Sbjct: 834 EGRKV 838
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 261/539 (48%), Gaps = 44/539 (8%)
Query: 63 PNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWK-----RGYDEGLY 116
P S N + S +Q +K L+ E L IC+ + L + K +
Sbjct: 3 PQSPXNSIPNCVSNQQLVKNLNPHSEFLQICLQHCWRIQAHNLFDEKPKPVLQALSTAKV 62
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS K L LGN + ++VK G++ A F ++ +D+F+WN ++ Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F + + M W V+P+ +TF VL C G+ D+ G++VH V + G+
Sbjct: 123 FATVVQSFVCM-WNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQG 181
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI MY KC L ARLVFDG D +SW A+I+GY +G M+ + +F M+ V P
Sbjct: 182 GLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL +V++A Y++ G + K+F
Sbjct: 242 DQITLVTVVNA-----------------------------------YVALGRLADARKLF 266
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+++ + +VV+W MIS + ++A+ + ++ G ++ SVLSA A L L+
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLN 326
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H A + GL + + + L++MY+KC +D A +VF+ + ++N++ W +++ G
Sbjct: 327 YGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFA 386
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N + E + FF M + +P+ T SI SACA + L G ++H ++ A + F
Sbjct: 387 QNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF 446
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ NAL+DMY + G +K A QF + D +WN ++ GY + A FR+M+ +
Sbjct: 447 VANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 265/522 (50%), Gaps = 7/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+A+ + +++ + +L +++ + G +H+ +K +V +G
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVG 347
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A ++M+ K + A VF + +R++ WN ++GG+A+ G E + + M G
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMK-RHGP 406
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD +TF + C + L G ++H +I+ + +++ V NAL+ MY K G L AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARK 466
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ M D +SWNA+I GY + + +F M V PD ++L+S++SA V +
Sbjct: 467 QFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE 526
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G++ H ++K+G + LI MY+ G VF M S++VVS +I+
Sbjct: 527 LKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L ++A+ +Q ++ G P E+T A +L C L+LG ++H M+ G +S
Sbjct: 587 YTMGHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645
Query: 434 I-IIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++ +L+ +Y + + +F ++ K ++ WT++I G N +AL F++ M
Sbjct: 646 SEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
N+ P+ S+L ACA + +L G+EIH+ G D ++L+DMY +CG +
Sbjct: 706 RSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDV 765
Query: 551 KPAWNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKM 590
K + F R +V +WN ++ G A+ G A E F++M
Sbjct: 766 KGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM 807
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 243/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +V G L A +F ++ + ++ +WNV+I G+AK GF +EA+S + + G +K
Sbjct: 250 VNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG-LKAT 308
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ VL + L G VH + G + +V V +AL+ MY KC + A+ VF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ + WNAM+ G+ +NG + + F M+ PD T +S+ SA +
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++H +IK F+ ++ V N L+ MY G +E K F M+ D VSW +I Y
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+A ++ M + G +PDE+++AS++SACA + L G + H L ++ GL +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNL 495
++LIDMY KC + A +VF+ +P +NV+S ++I G + + EA+ F+++ M+ L
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGL 607
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAW 554
KP VT +L C L G++IH ++ G ++ + +LL +Y+ R +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSE 667
Query: 555 NQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + + + W L++GYA++ A +F++ M
Sbjct: 668 TLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 240/513 (46%), Gaps = 38/513 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ +G ++ M + +E ++ C + + G +H V K
Sbjct: 111 NSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFK 170
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + M+ K L A VF + D SW LI GY + GF EA+ +
Sbjct: 171 TGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKV 230
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM VG PD T V VVNA YV
Sbjct: 231 FDRMQRVGHA-PDQITL-------------------------------VTVVNA----YV 254
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
G L AR +F +P + ++WN MISG+ + G + + F+ +++ + +L S
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA + G VH K G D+V V + L+ MY + ++VF+ + ++
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERN 374
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V W M+ + + L + +E + M+ G PDE T S+ SACA L L+ G +LH
Sbjct: 375 IVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHT 434
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++ S + +AN L+DMY+K + +A + F + + +SW +II+G + E
Sbjct: 435 VMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDE 494
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A FR+M+ N + P+ V+L SI+SACA + L G++ H +++G+ ++L+D
Sbjct: 495 AFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLID 554
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
MYV+CG + A + F S R+V + N L+ GY
Sbjct: 555 MYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY 587
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 210/427 (49%), Gaps = 8/427 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A M + DE +L ++V C + G H ++ K S G++
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSL 552
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+VK G + A VF M R++ S N LI GY G +EA+ L+Q + VG +KP
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVG-LKPT 610
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRARLVF 255
TF +L C G L G+++H V+++G+ + ++V +L+ +Y+ V + +F
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLF 670
Query: 256 DGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
+ + + W A+ISGY + + K L + MR + PD +SV+ A +
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSL 730
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD-VVSWTTMISC 373
+ G+E+H + GF+ D C+ LI MY G+ + +VF M ++ V+SW +MI
Sbjct: 731 QNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVG 790
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLIS 432
+ ++A+E ++ ME + +PDE+T VLSAC+ G + G K+ L + L+
Sbjct: 791 LAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLP 850
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKM 491
+ ++D+ + +++A E +++ K + + W++++ R + K+
Sbjct: 851 RVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKL 910
Query: 492 MLNLKPN 498
M LKP
Sbjct: 911 M-ELKPQ 916
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 278/553 (50%), Gaps = 20/553 (3%)
Query: 54 NTSSIATKNPNSRLNELCL-----NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK 108
+TSS+ + ++ L L +G L +A ++ M + + V + L C
Sbjct: 35 STSSVKISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACREL 94
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R G LH+ + + + SV L N L M+ + G L A +F +M D + S +I
Sbjct: 95 RSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMI 154
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
YA+ G D+A+ L+ RM G KP + +L++ L G+++H HVIR G
Sbjct: 155 SAYAEQGLLDKAVGLFSRML-ESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGL 213
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
++ + ++ MYVKCG LV A+ VFD M + ++W ++ GY + G L LF+
Sbjct: 214 CSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVD 273
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
+ V+ D S V+ A + + + G+++H V K+G +VSV PL+ Y+ +
Sbjct: 274 LITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSS 333
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLS 407
E + F + + VSW+ +IS Y ++AV+T++ + ++ ++ + T S+
Sbjct: 334 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQ 393
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ L + ++G ++H A++ LI + LI MYSKC C+D A EVF + + ++++
Sbjct: 394 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVA 453
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
WT+ I G + EAL F KM+ +KPNSVT +++L+AC+ G + GK L
Sbjct: 454 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTML 513
Query: 527 R---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG---YAER 577
R + D + + ++D+Y R G + A +F N E D +W L+G +
Sbjct: 514 RKYNVAPTIDHY--DCMIDIYARSGLLDEAL-RFMKNMPFEPDAMSWKCFLSGCWTHKNL 570
Query: 578 GQGALAEEFFRKM 590
G +A E R++
Sbjct: 571 ELGKIAGEELRQL 583
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 210/433 (48%), Gaps = 10/433 (2%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K G +EA +Q M GV +Y++ C+ C + L G+ +H + +
Sbjct: 50 NLHLVSLSKHGKLNEAFEFFQEMD-KAGVSVSLYSYQCLFEACRELRSLSHGRLLH-NRM 107
Query: 225 RFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
R G E V + N ++ MY +CG L A +FD M + +S MIS Y E G K +
Sbjct: 108 RMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAV 167
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIK 341
LF M E P ++++ + LV L GR++H +VI+ G + S+ ++
Sbjct: 168 GLFSRMLESGDKPPSSMYTTLLKS--LVNPRALDIGRQIHAHVIRAGLCSNASIETGIVN 225
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G ++VF +M K V+WT ++ Y + A++ + + EG D
Sbjct: 226 MYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFV 285
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ VL ACA L L G ++H + GL + + L+D Y KC + A F +I
Sbjct: 286 FSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIR 345
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGK 519
+ N +SW++II G ++ EA+ F+ + + NS T SI AC+ + G
Sbjct: 346 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGG 405
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++HA A++ + + +AL+ MY +CG + A F S + D+ AW ++G+A G
Sbjct: 406 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYG 465
Query: 579 QGALAEEFFRKMI 591
+ A F KM+
Sbjct: 466 NASEALRLFEKMV 478
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANT 439
++A E +Q M+ G + + AC L +L G LH MR G+ + +++ N
Sbjct: 63 NEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN-RMRMGIENPSVLLQNC 121
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
++ MY +C ++ A ++F ++ D N +S T++I +A+ F +M+ + KP
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
S ++L + AL G++IHAH +R G+ + + +++MYV+CG + A F+
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNW 597
+ AW L+ GY + G+ A + F +I W
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEW 281
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 277/569 (48%), Gaps = 28/569 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M I D ++++C + G+ +H +V +
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +A L M+ K + VF + +++ SW+ +I G + AL
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 184 YQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M V GV +Y VLR+C + +L+ G ++H H ++ + AD V A + MY
Sbjct: 269 FKEMQKVNAGVSQSIYA--SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ A+++FD +R S+NAMI+GY + K L+LF + + D ++LS
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V A LV G +++G IK S DV V N I MY E +VF M +
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + + + + M PDE T S+L AC G+L G+++H
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIH 505
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKA----------------LEVFHQIPDKNV- 465
+++G+ S + +LIDMYSKC I++A +E ++ +K +
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQ 565
Query: 466 ---ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+SW SII G + +S +A + F +MM + + P+ T ++L CA + + GK+I
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
HA ++ + D ++ + L+DMY +CG + + F + RD WN ++ GYA G+G
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 581 ALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + F +MI + K N + + R C
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRAC 714
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 256/524 (48%), Gaps = 28/524 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L ALK+ MQ++N V + +++R C G LH+ K+ +
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+ K ++ A +F + + S+N +I GY++ +AL L+ R+ G
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSG 377
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + V R C V L G +++ I+ DV V NA I MY KC L A
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD +SWNA+I+ + +NG+ + L LF+ M ++PD T S++ A G
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------- 358
G E+H ++K G + + SV LI MY G EE EK+ SR
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 359 --MESKDV----VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
M +K + VSW ++IS Y + A + M G PD+ T A+VL CA L
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ LG ++H ++ L S + I +TL+DMYSKC + + +F + ++ ++W ++I
Sbjct: 617 ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 676
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + + EA+ F +M+L N+KPN VT +SIL ACA +G + G E + + ++
Sbjct: 677 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYG 735
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
D LP+ ++D+ + G++K A E D W LL
Sbjct: 736 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 246/483 (50%), Gaps = 28/483 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-- 191
N ++ + K D+ A F M RD+ SWN ++ GY + G E+L + +G
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG---ESLKSIEVFVDMGRE 174
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++ D TF +L+ C + D G ++H V+R G + DV +AL+ MY K V +
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF G+P+++ +SW+A+I+G +N L F M++V +SV+ + +
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ +LG ++H + +K F+ D V + MY N ++ + +F E+ + S+ MI
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y KA+ + + + G DEI+++ V ACA + L G++++ LA+++ L
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +AN IDMY KC+ + +A VF ++ ++ +SW +II N + +E L F M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + ++P+ T SIL AC G+L G EIH+ ++ G+A + + +L+DMY +CG +
Sbjct: 475 LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 551 KPAWNQFNS--NERDVS-------------------AWNILLTGYAERGQGALAEEFFRK 589
+ A + +VS +WN +++GY + Q A+ F +
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 590 MID 592
M++
Sbjct: 594 MME 596
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 35/430 (8%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F V + C L+ GK+ H H+I G+ V+N L+ +Y D V A +VFD M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 259 PKRDRISWNAMI-------------------------------SGYFENGEYMKGLMLFI 287
P RD +SWN MI SGY +NGE +K + +F+
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M ++ D T + ++ + D LG ++HG V+++G DV + L+ MY
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 348 NREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
E +VF + K+ VSW+ +I+ C + ++L A++ ++ M+ + + ASVL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS-LALKFFKEMQKVNAGVSQSIYASVL 288
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+CA L L LG +LH A+++ + I+ +DMY+KC + A +F + N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
S+ ++I G F+AL+ F ++M + L + ++L + ACA + L G +I+ A
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
++ ++ D + NA +DMY +C + A+ F+ RD +WN ++ + + G+G
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 585 EFFRKMIDSK 594
F M+ S+
Sbjct: 469 FLFVSMLRSR 478
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 228/487 (46%), Gaps = 25/487 (5%)
Query: 43 NAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLV 102
N Q Q+L N+ ++ ++ N+ + +AL + + DE +L +
Sbjct: 331 NMQDAQIL-FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 389
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
R C +G EGL ++ + K+ L V + NA + M+ K L A+ VF +M RD
Sbjct: 390 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN +I + + G E L L+ M ++PD +TF +L+ C G L G E+H
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS----------------- 265
+++ G ++ V +LI MY KCG + A + +R +S
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 266 ---WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN++ISGY + MLF M E+ + PD T ++V+ + LG+++H
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
VIK DV +C+ L+ MY G+ + +F + +D V+W MI Y ++
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLI 441
A++ ++ M E P+ +T S+L ACA +G +D G++ + R GL + + ++
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 442 DMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV 500
D+ K + +ALE+ ++P + + + W +++ ++ + E +L L P
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 501 TLVSILS 507
+ ++LS
Sbjct: 808 SAYTLLS 814
>gi|145340387|ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18520
gi|110738662|dbj|BAF01256.1| hypothetical protein [Arabidopsis thaliana]
gi|332658657|gb|AEE84057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 617
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 257/486 (52%), Gaps = 8/486 (1%)
Query: 99 VNLVRLCEWKRGYDEGLYL----HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
V+ L EW + + G+ L H++ K + GN +S V+ GDL +A VF
Sbjct: 83 VDYALLAEWLQSSN-GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFD 141
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
M +++ +W +I GY K G DEA +L++ G + F C+L C + +
Sbjct: 142 SMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFE 201
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G++VH ++++ G ++ V ++L+ Y +CG+L A FD M ++D ISW A+IS
Sbjct: 202 LGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
G +K + +FI M P+ T+ S++ A + GR+VH V+K DV
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ MY G + KVF M +++ V+WT++I+ + ++A+ +++M+
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ + +T+ S+L AC +G L LG +LH ++ + + I +TL+ +Y KC A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
V Q+P ++V+SWT++I G EAL F ++M+ ++PN T S L ACA
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+L+ G+ IH+ A + + F+ +AL+ MY +CG + A+ F+S E+++ +W ++
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 573 GYAERG 578
GYA G
Sbjct: 561 GYARNG 566
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 221/424 (52%), Gaps = 9/424 (2%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
+E V L+ LC + ++ G +H ++V + +L V ++ + + + G+L A
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQCGELTSALR 239
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF--WVGGVKPDVYTFPCVLRTCGG 209
F M ++D+ SW +I ++ G +A+ ++ M W P+ +T +L+ C
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF---LPNEFTVCSILKACSE 296
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
L+ G++VH V++ + DV V +L+ MY KCG++ R VFDGM R+ ++W ++
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+ + G + + LF +M+ + + +T+ S++ A VG LG+E+H +IK
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
+V + + L+ +Y G + V ++ S+DVVSWT MIS +A++ +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M EG P+ T +S L ACA +L +G +H +A + +S + + + LI MY+KC
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSA 508
+ +A VF +P+KN++SW ++I+G N EAL + +R + + +ILS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 509 CARI 512
C I
Sbjct: 597 CGDI 600
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 210/391 (53%), Gaps = 7/391 (1%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L++ G+ +KR +H ++ + + N LI+ V+ GDLV AR VFD MP+++
Sbjct: 92 LQSSNGMRLIKR---IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNT 148
Query: 264 ISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W AMI GY + G + LF ++ + + +++ + +LGR+VHG
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHG 208
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
++K+G + + V + L+ Y G + F ME KDV+SWT +IS K
Sbjct: 209 NMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M +P+E T+ S+L AC+ L G ++H L ++ + + + + +L+D
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVT 501
MY+KC I +VF + ++N ++WTSII EA+ FR M +L N++T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
+VSIL AC +GAL+ GKE+HA ++ + + ++ + L+ +Y +CG + A+N
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RDV +W +++G + G + A +F ++MI
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H +A++ I N LI + + A +VF +P+KN ++WT++I G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 480 RSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EA F + + N V +L+ C+R G+++H + +++GV + +
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVE 221
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++L+ Y +CG + A F+ E+DV +W +++ + +G G A F M++
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 245/441 (55%), Gaps = 3/441 (0%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M DR+ S+ LI GY ++ DE + L+ R+ G + + + F +L+ V +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGH-ELNPFVFTTILKLLVSVECAEL 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
+H + + G+E++ V ALI Y CG + AR FD + +D +SW M++ Y E
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N + L LF MR V +P+ T + V+ A + +G+ VHG V+K + D+ V
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ +Y FG+ + +VF M DV+ W+ MIS Y S +AVE + M
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+P++ T ASVL +CA + NL LG ++H ++ GL + ++N L+D+Y+KC +D +++
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
+F ++P++N ++W ++I+G + +AL ++ M+ ++ + VT S+L ACA + A
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
+ G +IH+ +L+ D + NAL+DMY +CG +K A F+ +ERD +WN +++G
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419
Query: 574 YAERGQGALAEEFFRKMIDSK 594
Y+ G A + F+ M +++
Sbjct: 420 YSMHGLVGEALKAFQMMQETE 440
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 218/404 (53%), Gaps = 2/404 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K + +G A + + G + A F + +D+ SW ++ YA+
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
F ++L L+ M VG P+ +TF VL+ C G+ GK VH V++ YE D+ V
Sbjct: 123 FQDSLQLFAEMRMVG-FNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ +Y K GD VF+ MPK D I W+ MIS Y ++ + + + LF MR V P
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ T +SV+ + + + +LG++VH +V+K+G +V V N L+ +Y G + K+F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ +++ V+W TMI Y S DKA+ Y+ M E+T +SVL ACA L ++
Sbjct: 302 MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAME 361
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG ++H L+++T +++ N LIDMY+KC I A VF + +++ ISW ++I G
Sbjct: 362 LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYS 421
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
++ EAL F+ M PN +T VSILSAC+ G L G+
Sbjct: 422 MHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 223/437 (51%), Gaps = 4/437 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + +L+ M+ + + +++ C + G +H V KT + + +
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G L ++ KFGD VF +M D+ W+ +I YA++ EA+ L+ +M
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQM-RRAF 238
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +TF VL++C + +L+ GK+VH HV++ G + +V V NAL+ +Y KCG L +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P R+ ++WN MI GY ++G+ K L L+ M E V +T SSV+ A +
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+LG ++H +K + DV V N LI MY G+ + VF + +D +SW MIS
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
Y L +A++ +QMM+ +P+++T S+LSAC+ G LD+G + G+
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ ++ + + +DKA+++ +IP + NV W + +LG + + + I +
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRA-LLGACVIHNDVDLGIMSAQ 537
Query: 491 MMLNLKPNSVTLVSILS 507
+L + P +LS
Sbjct: 538 QILQIDPQDEATHVLLS 554
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 271/536 (50%), Gaps = 28/536 (5%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV------SKTMSHLSVRL 132
AL+ +M + DE L L+ C +G +HS++ + + +
Sbjct: 26 ALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMIHSLIVELGYGEQDGEEQDLMV 85
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ ++M+ K L A +F +M +R +FSW +++ +A+ G A+ Y++M G
Sbjct: 86 GNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQM-CCDG 144
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ TF +L C +L G+++ V G ++D+ V +A++ Y KCG L AR
Sbjct: 145 VDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAR 204
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
FD MP ++ ++WN MI+ Y ++G + + LF M + V PD M +SS++ A +
Sbjct: 205 EAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILGACSGL- 263
Query: 313 DEKLGREVHGYVI--KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +H VI + D +VCN L+ MY G+ ++ VF + SK+ VSWTT+
Sbjct: 264 --ESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTI 321
Query: 371 ISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACL--GNLDLGIKLH--- 422
I+ + D +Q+ M+ +G P E+TI L C+ + G L G LH
Sbjct: 322 IAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYALETCSKMDRGGLASGRALHTAM 381
Query: 423 QLAMRTGLISYIIIANTLIDMYSKC-KCIDKALEVFHQIPDKN--VISWTSIILGLRLNN 479
A R L+S + + N+L+DMY+ C ID F + KN V+SWT++I +
Sbjct: 382 DTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHG 441
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+S AL+ +KM L +K + + + +IL AC A G+E+H A +G A + + N
Sbjct: 442 QSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTIVGN 501
Query: 539 ALLDMYVRCGRMKPAWNQF----NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+ MY GR+ A F N+N + + + ++ GYA +G+ A + +M
Sbjct: 502 ALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEM 557
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 232/453 (51%), Gaps = 25/453 (5%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++FSW ++I Y +A +AL L++ M G + D T +L C + DL++GK
Sbjct: 5 KNVFSWTIIISAYVRADHGSDALQLFRTMNQEGD-RADEVTLTTLLGACSSLEDLQQGKM 63
Query: 219 VHVHVIRFGY------EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+H ++ GY E D+ V N+L+ MY KC L A +FD M R SW M++
Sbjct: 64 IHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTA 123
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ +NG+ + + + M VDP+ +T ++++A G+ GR++ V G D
Sbjct: 124 FAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSD 183
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ V + ++ Y G +E + F RM +K+ V+W MI+ Y S +A++ + ME
Sbjct: 184 LIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMED 243
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAM--RTGLISYIIIANTLIDMYSKCKCI 450
EG +PD + ++S+L AC+ L+ G ++H + R L S + N L+ MY++C +
Sbjct: 244 EGVVPDAMAVSSILGACS---GLESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSL 300
Query: 451 DKALEVFHQIPDKNVISWTSIILGL--RLNNRSFEALI-FFRKMMLN-LKPNSVTLVSIL 506
D A VF IP KN +SWT+II + N EA FR+M L+ + P+ VT+ L
Sbjct: 301 DDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYAL 360
Query: 507 SACARI--GALMCGKEIHAH---ALRIGVAFDGFLPNALLDMYVRCGRMKPA----WNQF 557
C+++ G L G+ +H A R+ + + N+LLDMY CG + A ++
Sbjct: 361 ETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHL 420
Query: 558 NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
DV +W ++ Y + GQ + A +KM
Sbjct: 421 LGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKM 453
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 248/537 (46%), Gaps = 40/537 (7%)
Query: 73 NGSLEQALKYLDSMQELNIC--VDEDAL--VNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
NG L++A++ M C VD +A+ V L+ C G + + V +
Sbjct: 127 NGQLQRAIQCYRQM----CCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDS 182
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ +G+A ++ + K G L A F +M ++ +WN +I Y ++G +A+ L+ M
Sbjct: 183 DLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATM- 241
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCG 246
GV PD +L C G L+ GK +H VI R ++D V NAL+ MY +CG
Sbjct: 242 EDEGVVPDAMAVSSILGACSG---LESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCG 298
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSS 303
L ARLVF +P ++ +SW +I+ + + F + RE+ +D P +T+
Sbjct: 299 SLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFY 358
Query: 304 VISASELV--GDEKLGREVHGYVIKMG---FSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+ + G GR +H + G V V N L+ MY S G+ + E +F
Sbjct: 359 ALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFD 418
Query: 359 M---ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
++ DVVSWT MI+ Y A+ + M+ EG DEI ++++L AC
Sbjct: 419 HLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQAT 478
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI---SWTSII 472
LG +LH+ A G S I+ N L+ MY +D A VF ++ + N ++T++I
Sbjct: 479 SLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMI 538
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G R+ +AL + +M L+ ++P T SI AC+ G L E H + I
Sbjct: 539 AGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALE---HFVFI-YD 594
Query: 532 FDGFLPNA-----LLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGA 581
F G P A ++D+ R G ++ A + E D+ AW LL QGA
Sbjct: 595 FQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPYEPDIVAWRSLLASCGGSDQGA 651
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 177/345 (51%), Gaps = 16/345 (4%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ SW +IS Y L LF M + D +TL++++ A + D + G+
Sbjct: 3 SRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGK 62
Query: 319 EVHGYVIKMGFSD------DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+H ++++G+ + D+ V N L+ MY + + +F RM+++ V SWT M++
Sbjct: 63 MIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVT 122
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + +A++ Y+ M +G P+ +T ++L+AC+ G L G K+ +GL S
Sbjct: 123 AFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDS 182
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I+ + +++ Y KC +D+A E F ++P KN ++W +I + + +A+ F M
Sbjct: 183 DLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATME 242
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL--RIGVAFDGFLPNALLDMYVRCGR 549
+ P+++ + SIL AC+ L GK IH+ + R + D + NAL+ MY RCG
Sbjct: 243 DEGVVPDAMAVSSILGACS---GLESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGS 299
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAE---RGQGALAEEFFRKM 590
+ A F + ++ +W ++ +A+ R A + FR+M
Sbjct: 300 LDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREM 344
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 279/550 (50%), Gaps = 8/550 (1%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS L+ NG +++ +LD + + D+ +++ C G+ +H ++
Sbjct: 144 NSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIV 203
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ + V G+A L M+ K L + +F ++ ++ W+ +I G + L
Sbjct: 204 RMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLE 263
Query: 183 LYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L++ M VG GV +Y V R+C G+ LK G ++H H ++ + +D+ V A + M
Sbjct: 264 LFKEMQKVGIGVSQSIYA--SVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDM 321
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG L A+ +F+ +PK +NA+I G N + + L F ++ + + + ++L
Sbjct: 322 YAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISL 381
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S SA + + GR++H +K ++ V N ++ MY E +F ME
Sbjct: 382 SGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMER 441
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D VSW +I+ +E + ++ + + M PD+ T SVL AC+ L+ G+++
Sbjct: 442 RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEI 501
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +++GL + LIDMY KC I++A ++ +I + ++SW +II G L S
Sbjct: 502 HNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHS 561
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+A FF +M+ +++KP++ T +L ACA + ++ GK+IH +++ + D ++ + L
Sbjct: 562 EDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTL 621
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNW 597
+DMY +CG M+ + F + +D WN ++ GYA+ G G A +F +M + + N
Sbjct: 622 VDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNH 681
Query: 598 RKLMGLFRKC 607
+ + R C
Sbjct: 682 ATFVSILRAC 691
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 258/499 (51%), Gaps = 41/499 (8%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--------FFD--- 178
V + N + M+++ L +A+ VF KM RD+ S+N +I GYA AG F+D
Sbjct: 78 VYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPK 137
Query: 179 --------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++ ++ M V D TF VL+ C + D G +
Sbjct: 138 RDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQ 197
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH ++R G+ DV +AL+ MY KC L + +F +P ++ + W+A+I+G +N E
Sbjct: 198 VHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDE 257
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
++ GL LF M++V + +SV + + K+G ++H + +K F D++V
Sbjct: 258 HILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTA 317
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGS 395
+ MY G+ + +++F+ + + + +I G V +K A++ +Q++ G
Sbjct: 318 TLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIV---GCVRNEKGFEALQFFQLLLKSGL 374
Query: 396 MPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+EI+++ SACA + G+LD G +LH L++++ L S I +AN+++DMY KC+ + +A
Sbjct: 375 GFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEAC 433
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F ++ ++ +SW ++I N E L F M+ L ++P+ T S+L AC+
Sbjct: 434 CMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQ 493
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD-VSAWNILLT 572
AL G EIH ++ G+ D F+ AL+DMY +CG ++ A + E+ + +WN ++
Sbjct: 494 ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 573 GYAERGQGALAEEFFRKMI 591
G+ A FF +M+
Sbjct: 554 GFTLLKHSEDAHSFFYEML 572
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 243/515 (47%), Gaps = 13/515 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
L+ MQ++ I V + ++ R C G LH+ K + +G A L
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLD 320
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A +F + L +N +I G + EAL +Q + G+ +
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQ-LLLKSGLGFNEI 379
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+ C + G+++H ++ +++ V N+++ MY KC L A +FD M
Sbjct: 380 SLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEM 439
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+RD +SWNA+I+ + +NG + L LF M + ++PD T SV+ A G
Sbjct: 440 ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
E+H +IK G D V LI MY G EE +K+ R+E + +VSW +I+ +
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ A + M PD T A VL ACA L ++ LG ++H ++ L S + I +
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITS 619
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
TL+DMYSKC + + VF + P+K+ ++W ++I G + EAL +F +M L N++P
Sbjct: 620 TLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRP 679
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKP 552
N T VSIL ACA +G + G H + G P + ++D+ R GR+
Sbjct: 680 NHATFVSILRACAHMGFIDKG----LHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISE 735
Query: 553 AWN--QFNSNERDVSAWNILLTGYAERGQGALAEE 585
A Q E D W LL+ G +AE+
Sbjct: 736 ALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEK 770
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 40/432 (9%)
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ TF +++ C LK GK+ H +I G+ DV + N L+ MY++C L A VF+
Sbjct: 43 IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102
Query: 257 GMPKRDRISWNAMISGY-------------------------------FENGEYMKGLML 285
M +RD IS+N MISGY +NGE K + +
Sbjct: 103 KMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDV 162
Query: 286 FI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
F+ M R V D T + V+ A ++ D LG +VHG +++MGF DV + L+ MY
Sbjct: 163 FLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA 222
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV---ETYQMMEAEGSMPDEIT 401
++ K+FS + K+ V W+ +I+ G V D+ + E ++ M+ G +
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIA---GCVQNDEHILGLELFKEMQKVGIGVSQSI 279
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
ASV +CA L L +G +LH A++ S I + +DMY+KC + A +F+ +P
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
++ + +II+G N + FEAL FF+ ++ + L N ++L SACA I + G++
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ 579
+H+ +++ + + + N++LDMY +C + A F+ E RD +WN ++ + + G
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459
Query: 580 GALAEEFFRKMI 591
F M+
Sbjct: 460 EEETLNLFASML 471
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 218/432 (50%), Gaps = 4/432 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL++ + + + +E +L C +G +G LHS+ K+ ++ + N+ L
Sbjct: 361 EALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSIL 420
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K L A +F +M RD SWN +I + + G +E L+L+ M + ++PD
Sbjct: 421 DMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLR-MEPDQ 479
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C L G E+H +I+ G D V ALI MY KCG + A+ + D
Sbjct: 480 FTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDR 539
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ ++ +SWNA+I+G+ F M ++ V PD T + V+ A + LG
Sbjct: 540 IEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLG 599
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++HG +IK+ DV + + L+ MY GN ++ VF + +KD V+W MI Y
Sbjct: 600 KQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQH 659
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L ++A+ ++ M+ E P+ T S+L ACA +G +D G+ + + GL I
Sbjct: 660 GLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEH 719
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ +ID+ + I +AL++ ++P + + + W +++ +++ + E +L L
Sbjct: 720 YSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHG-NIEIAEKATNAILQL 778
Query: 496 KPNSVTLVSILS 507
+P + +LS
Sbjct: 779 EPEDSSACILLS 790
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 389 MMEAEGSMPDEI-TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+ + + +P +I T + ++ C+ +L G + H + +G I + I+N L+ MY +C
Sbjct: 32 LQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRC 91
Query: 448 KCIDKALEVFHQI-------------------------------PDKNVISWTSIILGLR 476
++ A +VF ++ P ++V+SW S++ G
Sbjct: 92 SHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFL 151
Query: 477 LNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N +++ F M + + + T +L AC+ + G ++H +R+G D
Sbjct: 152 QNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDV 211
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ALLDMY +C R+ + F+ ++ W+ ++ G + + L E F++M
Sbjct: 212 VTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 256/495 (51%), Gaps = 10/495 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
L++ C +R EG LH + ++ S L + M+ K G L A F ++ D
Sbjct: 18 ARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIAD 77
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++ F WN++I GYA++G EAL L+ +M + P+ + F L C G+ DL++G+E
Sbjct: 78 KNDFVWNLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGRE 133
Query: 219 VHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H V+ +DV V N+L+TMY +CG ++ +FD MP+++ +SWNAMIS + +
Sbjct: 134 IHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCD 193
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L L+ M+ ++P+ +S+++A +G+ +LG +H + +G D+ + N
Sbjct: 194 YPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMEN 253
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI MY G +E +VFS + ++DV +WT+MI+ Y +A Y M + P
Sbjct: 254 ALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSP 313
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
T ++LSAC+ L+ G LH+ G S ++ L+ MYS+C ++ A +F
Sbjct: 314 TSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLF 370
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
++ K+ +SW++++ +AL FR+M+L ++ + T S L AC+
Sbjct: 371 AKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSR 430
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K I G+ + L+ Y +CG M+ A F+ E RDV W +++ GYA
Sbjct: 431 LSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYA 490
Query: 576 ERGQGALAEEFFRKM 590
++G A E F +M
Sbjct: 491 QQGDSKAALELFHRM 505
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 216/401 (53%), Gaps = 9/401 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ +V + +L+ C ++ G+ +H + R GY + ++ MY KCG L A+
Sbjct: 11 ESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKA 70
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
FD + ++ WN MISGY +G+ + L LF M + P+ +S ++A +GD
Sbjct: 71 AFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASALAACAGLGD 127
Query: 314 EKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GRE+H V++ + DV V N L+ MY G+ EG K+F M K++VSW MIS
Sbjct: 128 LEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMIS 187
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ P++A+E Y M+ E P+ AS+L+ACA LGNL LG +HQ GL
Sbjct: 188 AFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQR 247
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++ N LI+MYSKC C+D+ALEVF + ++V +WTS+I G EA F+ +M
Sbjct: 248 DIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMR 307
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + P S T V++LSAC+ L GK +H G + AL+ MY RCG ++
Sbjct: 308 RDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLE 364
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F ++D +W+ ++T +A+ G A FR+MI
Sbjct: 365 DAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMI 405
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 249/485 (51%), Gaps = 11/485 (2%)
Query: 112 DEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
++G +H V ++ S S V + N+ ++M+ + G + +F M ++L SWN +I
Sbjct: 129 EQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISA 188
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ + + ++AL LY RM ++P+ + F +L C + +L+ G +H + G +
Sbjct: 189 FVQCDYPEQALELYHRM-KRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQR 247
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ + NALI MY KCG + A VF G+ RD +W +MI+GY + G + + MR
Sbjct: 248 DIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMR 307
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V P T +++SA + + G+ +H V GF V L+ MY G+ E
Sbjct: 308 RDCVSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLE 364
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ E +F++M+ KD VSW+ M++ + P KA+ ++ M EG T S L AC+
Sbjct: 365 DAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACS 424
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L + +L +G+ I L+ YSKC +++A ++F ++ ++V++WT
Sbjct: 425 LKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTV 484
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI- 528
+I G S AL F +M ++P+SVT S+L AC+ L G+E+HA L
Sbjct: 485 MIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQ 541
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFF 587
G FL N L++MY RCG M+ A F S +R +W+ ++T A GQ + +
Sbjct: 542 GGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTY 601
Query: 588 RKMID 592
R M++
Sbjct: 602 RLMVN 606
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 251/508 (49%), Gaps = 25/508 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQAL+ M+ + + +L+ C G +H ++ + + NA
Sbjct: 196 EQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENAL 255
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K G + A VF + RD+F+W +I GYA+ GF EA + Y RM V P
Sbjct: 256 INMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRM-RRDCVSPT 314
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF +L C L++GK +H V FG+E+ V AL+ MY +CG L A +F
Sbjct: 315 SATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFA 371
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M ++D +SW+AM++ + + G+ K L LF M + T S + A L D +L
Sbjct: 372 KMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRL 431
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+ + + G S+ L+ Y G+ EE K+F RMES+DV++WT MI Y
Sbjct: 432 SKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQ 491
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGLISYI 434
A+E + M+ EG PD +T +SVL AC+ NL+ G ++H LA + G +S
Sbjct: 492 QGDSKAALELFHRMKPEGVEPDSVTFSSVLQACS---NLEDGREVHARILAAQGGKMS-D 547
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ N LI+MY++C + A ++F + + ISW S I+ L + + +I ++M+N
Sbjct: 548 FLGNGLINMYARCGSMRDARQIFESMDRSSRISW-SAIMTLCARHGQHDDIIDTYRLMVN 606
Query: 495 --LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN------ALLDMYVR 546
+ P+ VTL++IL++C+ G + + H I D LP+ ++D+ R
Sbjct: 607 EGVVPDGVTLIAILNSCSHAG--LTDEACHYFTWIIS---DFELPHLDEHYQCMVDLLCR 661
Query: 547 CGRMKPAWNQFNSNER-DVSAWNILLTG 573
GR+ A + +R DV N +L
Sbjct: 662 AGRLDEAEELISMIDRPDVVTLNTMLAA 689
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 13/264 (4%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S + K GD+ A +F +M RD+ +W V+I GYA+ G AL L+ RM GV+P
Sbjct: 454 LVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRM-KPEGVEP 512
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF VL+ C + D G+EVH ++ + G +D + N LI MY +CG + AR
Sbjct: 513 DSVTFSSVLQACSNLED---GREVHARILAAQGGKMSDF-LGNGLINMYARCGSMRDARQ 568
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ M + RISW+A+++ +G++ + + +M V PD +TL +++++ G
Sbjct: 569 IFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGL 628
Query: 314 EKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
++I ++ D+ C ++ + G +E E++ S ++ DVV+ TM
Sbjct: 629 TDEACHYFTWIISDFELPHLDEHYQC--MVDLLCRAGRLDEAEELISMIDRPDVVTLNTM 686
Query: 371 I-SCYEGSVLPDKAVETYQMMEAE 393
+ +C L A QM E
Sbjct: 687 LAACKNQQDLHRGARTAAQMQSTE 710
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 277/569 (48%), Gaps = 28/569 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M I D ++++C + G+ +H +V +
Sbjct: 107 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +A L M+ K + VF + +++ SW+ +I G + AL
Sbjct: 167 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 226
Query: 184 YQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M V GV +Y VLR+C + +L+ G ++H H ++ + AD V A + MY
Sbjct: 227 FKEMQKVNAGVSQSIYA--SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ A+++FD +R S+NAMI+GY + K L+LF + + D ++LS
Sbjct: 285 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 344
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V A LV G +++G IK S DV V N I MY E +VF M +
Sbjct: 345 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 404
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + + + + M PDE T S+L AC G+L G+++H
Sbjct: 405 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIH 463
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKA----------------LEVFHQIPDKNV- 465
+++G+ S + +LIDMYSKC I++A +E ++ +K +
Sbjct: 464 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQ 523
Query: 466 ---ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+SW SII G + +S +A + F +MM + + P+ T ++L CA + + GK+I
Sbjct: 524 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 583
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
HA ++ + D ++ + L+DMY +CG + + F + RD WN ++ GYA G+G
Sbjct: 584 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 643
Query: 581 ALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + F +MI + K N + + R C
Sbjct: 644 EEAIQLFERMILENIKPNHVTFISILRAC 672
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 256/524 (48%), Gaps = 28/524 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L ALK+ MQ++N V + +++R C G LH+ K+ +
Sbjct: 217 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 276
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+ K ++ A +F + + S+N +I GY++ +AL L+ R+ G
Sbjct: 277 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSG 335
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + V R C V L G +++ I+ DV V NA I MY KC L A
Sbjct: 336 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 395
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD +SWNA+I+ + +NG+ + L LF+ M ++PD T S++ A G
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 454
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------- 358
G E+H ++K G + + SV LI MY G EE EK+ SR
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 514
Query: 359 --MESKDV----VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
M +K + VSW ++IS Y + A + M G PD+ T A+VL CA L
Sbjct: 515 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 574
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ LG ++H ++ L S + I +TL+DMYSKC + + +F + ++ ++W ++I
Sbjct: 575 ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 634
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + + EA+ F +M+L N+KPN VT +SIL ACA +G + G E + + ++
Sbjct: 635 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYG 693
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
D LP+ ++D+ + G++K A E D W LL
Sbjct: 694 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 248/482 (51%), Gaps = 26/482 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++ + K D+ A F M RD+ SWN ++ GY + G +++ ++ M G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM-GREGI 134
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D TF +L+ C + D G ++H V+R G + DV +AL+ MY K V +
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF G+P+++ +SW+A+I+G +N L F M++V +SV+ + + +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG ++H + +K F+ D V + MY N ++ + +F E+ + S+ MI+
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y KA+ + + + G DEI+++ V ACA + L G++++ LA+++ L
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 374
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN IDMY KC+ + +A VF ++ ++ +SW +II N + +E L F M+
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ ++P+ T SIL AC G+L G EIH+ ++ G+A + + +L+DMY +CG ++
Sbjct: 435 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493
Query: 553 AWNQFNS---NERDVS-------------------AWNILLTGYAERGQGALAEEFFRKM 590
A + +S +VS +WN +++GY + Q A+ F +M
Sbjct: 494 A-EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552
Query: 591 ID 592
++
Sbjct: 553 ME 554
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 207/422 (49%), Gaps = 35/422 (8%)
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C L+ GK+ H H+I G+ V+N L+ +Y D V A +VFD MP RD +SW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 267 NAMI-------------------------------SGYFENGEYMKGLMLFIMMREVLVD 295
N MI SGY +NGE +K + +F+ M ++
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
D T + ++ + D LG ++HG V+++G DV + L+ MY E +V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 356 FSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F + K+ VSW+ +I+ C + ++L A++ ++ M+ + + ASVL +CA L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLS-LALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG +LH A+++ + I+ +DMY+KC + A +F + N S+ ++I G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
F+AL+ F ++M + L + ++L + ACA + L G +I+ A++ ++ D
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 374
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NA +DMY +C + A+ F+ RD +WN ++ + + G+G F M+
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 593 SK 594
S+
Sbjct: 435 SR 436
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 228/487 (46%), Gaps = 25/487 (5%)
Query: 43 NAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLV 102
N Q Q+L N+ ++ ++ N+ + +AL + + DE +L +
Sbjct: 289 NMQDAQIL-FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 347
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
R C +G EGL ++ + K+ L V + NA + M+ K L A+ VF +M RD
Sbjct: 348 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 407
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN +I + + G E L L+ M ++PD +TF +L+ C G L G E+H
Sbjct: 408 SWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 465
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS----------------- 265
+++ G ++ V +LI MY KCG + A + +R +S
Sbjct: 466 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 525
Query: 266 ---WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN++ISGY + MLF M E+ + PD T ++V+ + LG+++H
Sbjct: 526 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 585
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
VIK DV +C+ L+ MY G+ + +F + +D V+W MI Y ++
Sbjct: 586 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 645
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLI 441
A++ ++ M E P+ +T S+L ACA +G +D G++ + R GL + + ++
Sbjct: 646 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 705
Query: 442 DMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV 500
D+ K + +ALE+ ++P + + + W +++ ++ + E +L L P
Sbjct: 706 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 765
Query: 501 TLVSILS 507
+ ++LS
Sbjct: 766 SAYTLLS 772
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 263/520 (50%), Gaps = 9/520 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E L + +R C R G +H V + +V +G A ++++ K G + A VF
Sbjct: 113 NEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVF 172
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ ++ +W +I GY++ G AL L+ +M + GV+PD + + C + L
Sbjct: 173 DALPVKNPVTWTAVITGYSQIGQGGVALELFGKM-GLDGVRPDRFVLASAVSACSALGFL 231
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G++ H + R E D V+NALI +Y KC L AR +FD M R+ +SW MI+GY
Sbjct: 232 EGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGY 291
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+N + + +F + + PD +S++++ + GR+VH + IK D
Sbjct: 292 MQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE 351
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD--KAVETYQMME 391
V N LI MY + E VF + D +S+ MI Y S L D A++ + M
Sbjct: 352 YVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGY--SRLGDLAGAIDVFSKMR 409
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
P +T S+L + ++L ++H L +++G + ++LID+YSK ++
Sbjct: 410 YCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVE 469
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A VF+ + +++++ W ++I GL N + EA+ F ++ ++ L PN T V++++ +
Sbjct: 470 DAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVAS 529
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNI 569
+ ++ G++ HA ++ G D + NAL+DMY +CG +K F S +DV WN
Sbjct: 530 TLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNS 589
Query: 570 LLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+++ YA+ GQ A FR M + + N+ +G+ C
Sbjct: 590 MISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSAC 629
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 248/464 (53%), Gaps = 7/464 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY---QRMF 188
L N L + K G + A +F +M ++L SW I +A+ G ++A++L+ QR
Sbjct: 48 LANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRA- 106
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GG P+ + LR C + G++VH +R G + +V V ALI +Y K G +
Sbjct: 107 -SGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCI 165
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A LVFD +P ++ ++W A+I+GY + G+ L LF M V PD L+S +SA
Sbjct: 166 DAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSAC 225
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G + GR+ HGY ++ D SV N LI +Y K+F ME++++VSWT
Sbjct: 226 SALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWT 285
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TMI+ Y + +A+ + + EG PD AS+L++C L + G ++H A++
Sbjct: 286 TMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKA 345
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIF 487
L S + N+LIDMY+KC+ + +A VF + + + IS+ ++I G RL + + +F
Sbjct: 346 NLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVF 405
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+ +LKP+ +T VS+L + A+ K+IH ++ G + D + ++L+D+Y +
Sbjct: 406 SKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465
Query: 548 GRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A FN + RD+ WN ++ G A+ QG A + F ++
Sbjct: 466 SLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL 509
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 221/439 (50%), Gaps = 8/439 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL+ M + D L + V C + G H + + NA +
Sbjct: 199 ALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALID 258
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV---GGVKP 195
++ K L A +F M +R+L SW +I GY + EA++ MFW G +P
Sbjct: 259 LYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMA----MFWQLSQEGWQP 314
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV+ +L +CG + + +G++VH H I+ E+D V N+LI MY KC L AR VF
Sbjct: 315 DVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVF 374
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + + D IS+NAMI GY G+ + +F MR + P +T S++ S +
Sbjct: 375 EALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIE 434
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +++HG ++K G S D+ + LI +Y F E+ + VF+ M ++D+V W MI
Sbjct: 435 LSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLA 494
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++AV+ + ++ G P+E T ++++ + L ++ G + H ++ G S
Sbjct: 495 QNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHH 554
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
++N LIDMY+KC I + +F K+VI W S+I + ++ EAL FR M
Sbjct: 555 VSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTG 614
Query: 495 LKPNSVTLVSILSACARIG 513
++PN VT V +LSACA G
Sbjct: 615 VEPNYVTFVGVLSACAHAG 633
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 194/376 (51%), Gaps = 4/376 (1%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + G D+ + N L+ Y K G + AR +FD MP ++ +SW + IS + ++G
Sbjct: 33 AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGC 92
Query: 279 YMKGLMLFIMMREVL--VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ LF + P+ L+S + A G++VHG +++G +V V
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI +Y G + VF + K+ V+WT +I+ Y A+E + M +G
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +AS +SAC+ LG L+ G + H A R + + + N LID+Y KC + A ++
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGAL 515
F + ++N++SWT++I G N+ EA+ F ++ +P+ SIL++C + A+
Sbjct: 273 FDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAI 332
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+++HAHA++ + D ++ N+L+DMY +C + A F + E D ++N ++ GY
Sbjct: 333 WQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGY 392
Query: 575 AERGQGALAEEFFRKM 590
+ G A A + F KM
Sbjct: 393 SRLGDLAGAIDVFSKM 408
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + M+ K L A VF + + D S+N +I GY++ G A+ ++ +M + +
Sbjct: 355 NSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCS-L 413
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP TF +L ++ K++H +++ G D+ ++LI +Y K + A+
Sbjct: 414 KPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKA 473
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M RD + WNAMI G +N + + + LF ++ + P+ T ++++ + +
Sbjct: 474 VFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVS 533
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G++ H +IK G D V N LI MY G +EG +F KDV+ W +MIS
Sbjct: 534 MFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIST 593
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y ++A+ ++MM G P+ +T VLSACA G +D G++ H M+T Y
Sbjct: 594 YAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLR-HFDFMKT---KY 649
Query: 434 IIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
I T +++++ + + A E ++P + W S++ L
Sbjct: 650 AIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHL 699
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 13/306 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L A+ M+ ++ V+L+ + + + +H ++ K+ + L + G
Sbjct: 396 GDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAG 455
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + ++ KF + A VF M +RD+ WN +I G A+ +EA+ L+ ++ V G+
Sbjct: 456 SSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL-QVSGL 514
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +TF ++ + + G++ H +I+ G ++D V NALI MY KCG + RL
Sbjct: 515 APNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRL 574
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG- 312
+F+ +D I WN+MIS Y ++G+ + L +F MM V+P+++T V+SA G
Sbjct: 575 LFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGL 634
Query: 313 -DEKLGREVH----GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS- 366
DE L R Y I+ G SV N ++ G ++ RM + +
Sbjct: 635 VDEGL-RHFDFMKTKYAIEPGTEHYASVVN----LFGRSGKLHAAKEFIERMPIEPAAAV 689
Query: 367 WTTMIS 372
W +++S
Sbjct: 690 WRSLLS 695
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 120/306 (39%), Gaps = 43/306 (14%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L N E+A+K + +Q + +E V LV + G H+ + K
Sbjct: 487 NAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIK 546
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA + M+ K G + +F +D+ WN +I YA+ G +EAL +
Sbjct: 547 AGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYV 606
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMY 242
+ RM GV+P+ TF VL C + G + ++ E + +++ ++
Sbjct: 607 F-RMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLF 665
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ G L A+ + MP ++P
Sbjct: 666 GRSGKLHAAKEFIERMP----------------------------------IEPAAAVWR 691
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM---YLSFGNREEGEKVFSRM 359
S++SA L G+ ++GR Y +M D + P + M Y S G + +K+ M
Sbjct: 692 SLLSACHLFGNVEIGR----YATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGM 747
Query: 360 ESKDVV 365
+ VV
Sbjct: 748 DCAGVV 753
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 248/469 (52%), Gaps = 21/469 (4%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
D L++L++ C + + + M ++ N L F+ D +A +F +
Sbjct: 32 DKLLSLLKQCTSTKSLQQ-------IHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQ 84
Query: 156 MCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+ + +++N++I G F+ + Y +M G ++P+ +T+P V C + L
Sbjct: 85 IPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFG-IRPNNFTYPFVFIACANLLVLN 143
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ H V++ G AD V ++LITMY +CG+L AR VFD + ++D +SWN+MISGY
Sbjct: 144 HGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYS 203
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
G + LF MR+ +PD MTL S++ A +GD LG + G+V++ +
Sbjct: 204 RMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSF 263
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V + LI MY G+ +VF RM KDVV+W MI+ Y + + D+A+ + M G
Sbjct: 264 VGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESG 323
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD+IT+ VLSACA +G LD G L A GL + I ++ LIDMY+KC +D AL
Sbjct: 324 VNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDAL 383
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACAR 511
VF +P KN +SW ++I L + R E+L F++M ++PN ++ + +LSAC
Sbjct: 384 RVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVH 443
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWN 555
G + G+++ + + G +P + ++D+ R G + AW+
Sbjct: 444 AGLVDEGRQL----FDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWD 488
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 183/379 (48%), Gaps = 7/379 (1%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE-YMKGLMLFIMMREVLV 294
N L+ ++ D A L+F +P + ++N MI G + + + + M++ +
Sbjct: 63 NFLLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGI 122
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P+ T V A + G+ H V+K G D V + LI MY G +
Sbjct: 123 RPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARR 182
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF + KD+VSW +MIS Y AV + M G PDE+T+ S+L AC LG+
Sbjct: 183 VFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGD 242
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG + + + + + LI MY KC + A VF ++ K+V++W ++I G
Sbjct: 243 LGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITG 302
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N S EA+I F M + + P+ +TLV +LSACA IGAL GK + +A G+ D
Sbjct: 303 YAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQND 362
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ AL+DMY +CG + A F +++ +WN +++ A G+ + F++M
Sbjct: 363 IYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSK 422
Query: 593 SKGNWR----KLMGLFRKC 607
G R +G+ C
Sbjct: 423 EGGAVRPNDISFIGVLSAC 441
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++A+ M+E + D+ LV ++ C D G +L + S+
Sbjct: 297 NAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASE 356
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + A + M+ K G L A VF M ++ SWN +I A G E+LSL
Sbjct: 357 RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSL 416
Query: 184 YQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITM 241
++RM GG V+P+ +F VL C + G+++ + FG ++ + ++ +
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDL 476
Query: 242 YVKCGDLVRARLVFDGMPKR-DRISWNAMI 270
+ G + A + MP++ D + A++
Sbjct: 477 LARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 253/485 (52%), Gaps = 17/485 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L + FG ++ VF ++ + ++F WN +I G FD+A+ LY M G
Sbjct: 50 LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRG-G 108
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ +T P VL+ C D++ G ++H +++ GY+ DV V +L+++YVKC + A
Sbjct: 109 GFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD +P ++ +SW A+I+GY +G + + + F + E+ + PD +L V++A +
Sbjct: 169 LKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD G + Y+ G +V V L+ MY+ GN E +FS M KD+VSW+TMI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + LP +A++ + M++E PD T+ VLSACA LG LDLGI L R +
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFL 348
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++ LIDMYSKC + +A E+F + K+ + W ++++GL +N + F +
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLV 408
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
+ ++P+ T + +L C G + G++ + R+ P+ ++D+
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVF----SLTPSIEHYGCMVDLLG 464
Query: 546 RCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID----SKGNWRK 599
R G + A N+ +A W LL G LAE+ +K+I+ + GN+ +
Sbjct: 465 RAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQ 524
Query: 600 LMGLF 604
L ++
Sbjct: 525 LSNIY 529
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 193/373 (51%), Gaps = 2/373 (0%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H ++R + D ++N ++ + G ++LVF + + + WN MI G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L+ MR P+ T+ V+ A D +LG ++H ++K G+ DV V
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+ +Y+ N ++ KVF + K+VVSWT +I+ Y S +A+ ++ + G
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD ++ VL+ACA LG+ G + + +G+ + +A +L+DMY KC +++A +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGAL 515
F +P+K+++SW+++I G N +AL +FF+ NLKP+ T+V +LSACA +GAL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G + R + L AL+DMY +CG + AW F + ++D WN ++ G
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392
Query: 575 AERGQGALAEEFF 587
+ G F
Sbjct: 393 SMNGHAKAVFSLF 405
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 217/454 (47%), Gaps = 8/454 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L + A+ SM+ + + +++ C K GL +HS++ K
Sbjct: 83 NTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + + LS++VK + A VF + D+++ SW +I GY +G F EA+
Sbjct: 143 AGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGA 202
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ + G+KPD ++ VL C + D G+ + ++ G +V V +L+ MYV
Sbjct: 203 FKKLLEM-GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L RA L+F MP++D +SW+ MI GY NG + L LF M+ + PD T+
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA +G LG + + F + + LI MY G+ + ++F+ M+ KD
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W M+ + + ++E G PDE T +L C G ++ G +
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
R L I ++D+ + +++A ++ + +P K N + W +++ G +L+ +
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 482 FEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
A +K ++ L+P N V L +I S R
Sbjct: 502 HLAEQVLKK-LIELEPWNSGNYVQLSNIYSGNHR 534
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 282/529 (53%), Gaps = 10/529 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L A LD M + N D L++ C R + G +H + ++ L +
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N +S++ K GD A +F M + RDL SW+ ++ +A +A+ + M +G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG- 123
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVK-CGDLVR 250
P+ Y F V+R C G+ ++ V++ GY EADV V LI M+VK GDL
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VFD MP+R+ ++W MI+ + + G + LF+ M PD T SSV+SA
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSW 367
+G LG+++H VI++G + DV V L+ MY + G+ ++ KVF +M +V+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 368 TTMISCYEGSVLPDK-AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
T +I+ Y S DK A+E + M + P+ + +SVL AC L + G +++ A+
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ G+ S + N+LI MY++ ++ A + F + +KN++S+ +I+ G N +S EA +
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 423
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F ++ + ++ T S+LS A IGA+ G++IH L+ G + + NAL+ MY
Sbjct: 424 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 483
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
RCG ++ A+ FN E R+V +W ++TG+A+ G A E F KM+++
Sbjct: 484 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 532
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 264/514 (51%), Gaps = 20/514 (3%)
Query: 73 NGSLE-QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT-MSHLSV 130
N S+E QA+ M EL +E ++R C G ++ V KT V
Sbjct: 105 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 164
Query: 131 RLGNAFLSMFVK-FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+G + MFVK GDLG A+ VF KM +R+L +W ++I +A+ G +A+ L+ M
Sbjct: 165 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 224
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---G 246
G V PD +T+ VL C + L GK++H VIR G DV V +L+ MY KC G
Sbjct: 225 SGYV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 283
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVI 305
+ +R VF+ MP+ + +SW A+I+ Y ++GE K + LF M + P+ + SSV+
Sbjct: 284 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 343
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + D G +V+ Y +K+G + V N LI MY G E+ K F + K++V
Sbjct: 344 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 403
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
S+ ++ Y ++ ++A + + G T AS+LS A +G + G ++H
Sbjct: 404 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 463
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ G S I N LI MYS+C I+ A +VF+++ D+NVISWTS+I G + + AL
Sbjct: 464 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 523
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----A 539
F KM+ KPN +T V++LSAC+ +G + G++ H +++ G +P
Sbjct: 524 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK-HFNSM---YKEHGIVPRMEHYAC 579
Query: 540 LLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILL 571
++D+ R G + A NS D W LL
Sbjct: 580 MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 217/400 (54%), Gaps = 8/400 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKF---GDLGHAWYVFGKMCDRDLFSWNVLIGG 170
G LHS V + L V +G + + M+ K G + + VF +M + ++ SW +I
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309
Query: 171 YAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y ++G D EA+ L+ +M G ++P+ ++F VL+ CG + D G++V+ + ++ G
Sbjct: 310 YVQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 368
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V N+LI+MY + G + AR FD + +++ +S+NA++ GY +N + + +LF +
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 428
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + T +S++S + +G G ++HG ++K G+ + +CN LI MY GN
Sbjct: 429 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 488
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +VF+ ME ++V+SWT+MI+ + +A+E + M G+ P+EIT +VLSAC
Sbjct: 489 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 548
Query: 410 ACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
+ +G + G K + + G++ + ++D+ + + +A+E + +P + +
Sbjct: 549 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 608
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W +++ R++ + E +M+L +P+ +LS
Sbjct: 609 WRTLLGACRVHGNT-ELGRHAAEMILEQEPDDPAAYILLS 647
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 270/534 (50%), Gaps = 6/534 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ + M I + + +++R C D G +H + K + + + L
Sbjct: 82 EAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLL 141
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ G L +A VF M RDL SW+ +I Y G E L ++ R+ V+ D
Sbjct: 142 GMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMF-RLLVSQDVELDS 200
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T + CG + L+ K VH +IR E + +AL+ MY +C D A +F
Sbjct: 201 VTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSN 260
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M R SW AMIS Y + + + L +F+ M E V P+ +T+ +V+S+ + G
Sbjct: 261 MFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREG 320
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ VH Y +K DD S+ LI+ Y FG EKV + ++++SW +IS Y
Sbjct: 321 KSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQ 380
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L +A+ + M+ +G +PD +++S +SACA +G L LG ++H A++ ++ +
Sbjct: 381 GLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFV-Q 439
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N+LIDMYSKC +D A +F +I K+V++W S+I G S EA+ F +M LN L
Sbjct: 440 NSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLD 499
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT ++ + AC+ +G L GK +H + GV D F+ AL+DMY +CG ++ A
Sbjct: 500 MNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRV 559
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
F+S +ER V +W+ ++ G G A F +MI + K N M + C
Sbjct: 560 FDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSAC 613
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 247/476 (51%), Gaps = 4/476 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LHS + T H + + + + G L + VF + D F W VLI + + F
Sbjct: 20 LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA+SLY +M + D + F VLR C G +L G+EVH +I++G + D V
Sbjct: 80 CGEAISLYNKMIYKQIPISD-FIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVET 138
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY G L A+ VFD M RD +SW+++IS Y +NGE +GL +F ++ V+
Sbjct: 139 SLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVEL 198
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T+ S+ A +G +L + VHG +I+ + + L+ MY + E++F
Sbjct: 199 DSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIF 258
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
S M ++ + SWT MISCY S +A++ + M P+ +TI +VLS+CA L
Sbjct: 259 SNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLR 318
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H A++ + + LI+ Y++ + +V H I +N+ISW +I
Sbjct: 319 EGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYA 378
Query: 477 LNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
EAL F +M + P+S +L S +SACA +G L G +IH +A++ + D F
Sbjct: 379 SQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEF 437
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ N+L+DMY +CG + A+ F+ + V AWN ++ G+++ G A F +M
Sbjct: 438 VQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQM 493
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 222/445 (49%), Gaps = 5/445 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L +A + M+ + D A +F M +R + SW +I Y ++ +F +AL ++ M
Sbjct: 237 LNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFK 296
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P+ T VL +C G L+ GK VH + ++ D + ALI Y + G L
Sbjct: 297 -VAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYC 355
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
V + KR+ ISWN +IS Y G + + L +F+ M+ PD +LSS ISA V
Sbjct: 356 EKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANV 415
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LG ++HGY IK D+ V N LI MY G+ + +F R++SK VV+W +MI
Sbjct: 416 GLLWLGHQIHGYAIKRHILDEF-VQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMI 474
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A+ + M +E+T + + AC+ +G+L+ G LH + G+
Sbjct: 475 CGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVK 534
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I LIDMY+KC + A VF + +++V+SW+++I G ++ A+ F +M
Sbjct: 535 KDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEM 594
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ +KPN +T ++ILSAC+ G + GK V + ++D+ R G +
Sbjct: 595 IQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDL 654
Query: 551 KPAWNQFNSN--ERDVSAWNILLTG 573
A+ NS + S W LL G
Sbjct: 655 DEAYRIINSMPFPAEASIWGALLNG 679
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 16/445 (3%)
Query: 71 CLNGS--LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
C N S +QAL+ M E + + ++ ++ C EG +H K +
Sbjct: 275 CYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLD 334
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
LG A + + +FG L + V + R++ SWN+LI YA G F EAL ++ +M
Sbjct: 335 DDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQ 394
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G + PD ++ + C V L G ++H + I+ + D V N+LI MY KCG +
Sbjct: 395 RQGQI-PDSFSLSSSISACANVGLLWLGHQIHGYAIK-RHILDEFVQNSLIDMYSKCGHV 452
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A L+FD + + ++WN+MI G+ + G ++ + LF M +D + +T + I A
Sbjct: 453 DLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQAC 512
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G + G+ +H +I G D+ + LI MY G+ +VF M + VVSW+
Sbjct: 513 SHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWS 572
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI D A+ + M P++IT ++LSAC+ G ++ G K + +M+
Sbjct: 573 AMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEG-KFYFNSMK- 630
Query: 429 GLISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSF 482
++ + N ++D+ S+ +D+A + + +P S W +++ G R++ R
Sbjct: 631 ---NFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQR-M 686
Query: 483 EALIFFRKMMLNLKPNSVTLVSILS 507
+ + + +L+++ + ++LS
Sbjct: 687 DMIRNIERDLLDMRTDDTGYYTLLS 711
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 250/467 (53%), Gaps = 18/467 (3%)
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA--LSLYQRMFWVGGVKPDVY 198
+ G L A ++F ++ D+ ++N LI Y+ + A L LY+RM V P+ Y
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLR-HRVAPNNY 126
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TFP L+ C + D G+ +H H I G +AD+ V AL+ MYVKC L A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 259 PKRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P RD ++WNAM++GY +G Y + +L + M+ + P+ TL +++ G
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 317 GREVHGYVI----------KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
G VH Y I K +D V + L+ MY G+ +VF M +++ V+
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W+ +I + +A ++ M A+G +IAS L ACA L +L +G +LH L
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++G+ + + N+L+ MY+K ID+A+ +F ++ K+ +S+++++ G N R+ EA
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ F+KM N++P++ T+VS++ AC+ + AL G+ H + G+A + + NAL+DMY
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 545 VRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CGR+ + FN RD+ +WN ++ GY G G A F +M
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 20/458 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS-LYQRMFWV 190
+ A L M+VK L A ++F M RDL +WN ++ GYA G + A++ L +
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD----------VDVVNALIT 240
++P+ T +L L +G VH + IR + V + AL+
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 281
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
MY KCG L+ AR VFD MP R+ ++W+A+I G+ + +LF M+ + L
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+++S + A + ++G ++H + K G D++ N L+ MY G ++ +F M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD VS++ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL S I N LIDMY+KC ID + +VF+ +P ++++SW ++I G ++
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGF 535
EA F +M L P+ VT + +LSAC+ G ++ GK + H + + +
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 581
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G + A+ S DV W LL
Sbjct: 582 I--CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 225/466 (48%), Gaps = 19/466 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQEL--NICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N+ L +G A+ +L SMQ + + LV L+ L + +G +H+
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 254
Query: 122 SKTMSHLS----------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+ H + V LG A L M+ K G L +A VF M R+ +W+ LIGG+
Sbjct: 255 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 314
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+A L++ M G + LR C + L+ G+++H + + G AD
Sbjct: 315 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD 374
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ N+L++MY K G + +A +FD M +D +S++A++SGY +NG + ++F M+
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+PD T+ S+I A + + GR HG VI G + + S+CN LI MY G +
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF+ M S+D+VSW TMI+ Y L +A + M G PD +T +LSAC+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 412 LGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWT 469
G + G H + GL + ++D+ S+ +D+A E +P + +V W
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ R+ ++ + +M+ L P N V L +I SA R
Sbjct: 615 ALLGACRV-YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 659
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 245/438 (55%), Gaps = 4/438 (0%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++++ WN +I ++K G F EAL Y ++ V PD YTFP V++ C G+ D + G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
V+ ++ G+E+D+ V NAL+ MY + G L RAR VFD MP RD +SWN++ISGY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y + L ++ ++ + PD T+SSV+ A + K G+ +HG+ +K G + V V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MYL F + +VF M+ +D VS+ TMI Y + +++V + + + PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPD 306
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T++SVL AC L +L L ++ ++ G + + N LID+Y+KC + A +VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+ K+ +SW SII G + EA+ F+ MM + + + +T + ++S R+ L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GK +H++ ++ G+ D + NAL+DMY +CG + + F+S D WN +++
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 577 RGQGALAEEFFRKMIDSK 594
G A + +M S+
Sbjct: 487 FGDFATGLQVTTQMRKSE 504
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 270/531 (50%), Gaps = 8/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +AL++ ++E + D+ ++++ C + G ++ +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ + G L A VF +M RDL SWN LI GY+ G+++EAL +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 184 YQRM--FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y + W + PD +T VL G + +K+G+ +H ++ G + V V N L+ M
Sbjct: 195 YHELKNSW---IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y+K AR VFD M RD +S+N MI GY + + + +F+ + PD +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTV 310
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSV+ A + D L + ++ Y++K GF + +V N LI +Y G+ VF+ ME
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD VSW ++IS Y S +A++ ++MM D IT ++S L +L G L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNR 480
H +++G+ + ++N LIDMY+KC + +L++F + + ++W ++I +R +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ + + + P+ T + L CA + A GKEIH LR G + + NAL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++MY +CG ++ + F + RDV W ++ Y G+G A E F M
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 253/490 (51%), Gaps = 18/490 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G LH K+ + V + N ++M++KF A VF +M RD S+N +I GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 173 KAGFFDEALSLYQRMFW--VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
K +E++ RMF + KPD+ T VLR CG + DL K ++ ++++ G+
Sbjct: 285 KLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ V N LI +Y KCGD++ AR VF+ M +D +SWN++ISGY ++G+ M+ + LF MM
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ D +T +IS S + D K G+ +H IK G D+SV N LI MY G
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 351 EGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ K+FS M + D V+W T+IS C T QM ++E +PD T L C
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMC 519
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L LG ++H +R G S + I N LI+MYSKC C++ + VF ++ ++V++WT
Sbjct: 520 ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWT 579
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAH 524
+I + +AL F M + + P+SV ++I+ AC+ G L C +++ H
Sbjct: 580 GMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPA--WNQFNSNERDVSAWNILLTGYAERGQGAL 582
+I + + ++D+ R ++ A + Q + D S W +L G
Sbjct: 640 -YKIDPMIEHY--ACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 583 AEEFFRKMID 592
AE R++I+
Sbjct: 697 AERVSRRIIE 706
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 200/393 (50%), Gaps = 2/393 (0%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-P 259
P + R +L + +H VI G ++ LI Y + + VF + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
++ WN++I + +NG + + L + +RE V PD T SVI A + D ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
V+ ++ MGF D+ V N L+ MY G +VF M +D+VSW ++IS Y
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
++A+E Y ++ +PD T++SVL A L + G LH A+++G+ S +++ N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
L+ MY K + A VF ++ ++ +S+ ++I G E++ F + + KP+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T+ S+L AC + L K I+ + L+ G + + N L+D+Y +CG M A + FNS
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
E +D +WN +++GY + G A + F+ M+
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI- 460
I+ LS+ + L L ++H L + GL S + LID YS + +L VF ++
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P KNV W SII N EAL F+ K+ + + P+ T S++ ACA + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
++ L +G D F+ NAL+DMY R G + A F+ RD+ +WN L++GY+ G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 579 QGALAEEFFRKMIDSKGNW 597
A E + ++ K +W
Sbjct: 187 YYEEALEIYHEL---KNSW 202
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 274/530 (51%), Gaps = 41/530 (7%)
Query: 116 YLHSVVSKTM-SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI------ 168
+L S+ + T S+ S+ N L+ K G + A +F KM +D +SWN +I
Sbjct: 50 FLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNV 109
Query: 169 -------------------------GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
GY K G EA L++ M + G K +T V
Sbjct: 110 GRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSM-RLEGWKASQFTLGSV 168
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP--KR 261
LR C + ++ G+ +H V++ G+E +V VV L+ MY KC + A +F G+ ++
Sbjct: 169 LRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRK 228
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ + W AM++GY +NG+ K + F M V+ + T ++++A V G +VH
Sbjct: 229 NHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVH 288
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G+++K GF +V V + L+ MY G+ + + + ME DVVSW +++ + L +
Sbjct: 289 GFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEE 348
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+ ++ M D+ T SVL+ C +G+++ +H L ++TG +Y +++N L+
Sbjct: 349 EALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINPK-SVHGLIIKTGFENYKLVSNALV 406
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
DMY+K +D A VF ++ +K+VISWTS++ G NN E+L F M + + P+
Sbjct: 407 DMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQF 466
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
+ SILSACA + L GK++H ++ G+ + + N+L+ MY +CG + A F S
Sbjct: 467 IVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSM 526
Query: 561 E-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ +DV W ++ GYA+ G+G + +F+ M+ S + ++ +GL C
Sbjct: 527 QVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFAC 576
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 266/520 (51%), Gaps = 9/520 (1%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C G +A SM+ + L +++R+C G +H V K +V
Sbjct: 138 CKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNV 197
Query: 131 RLGNAFLSMFVKFGDLGHAWYVF-GKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + M+ K + A ++F G DR + W ++ GYA+ G +A+ ++ M
Sbjct: 198 FVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMH 257
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV+ + YTFP +L C V G++VH +++ G+ ++V V +AL+ MY KCGDL
Sbjct: 258 -AQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDL 316
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+ + + M D +SWN+++ G+ +G + L LF M + D T SV++
Sbjct: 317 KNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC 376
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+VG + VHG +IK GF + V N L+ MY G+ + VF +M KDV+SWT
Sbjct: 377 -VVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWT 434
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++++ Y + +++++ + M G PD+ +AS+LSACA L L+ G ++H +++
Sbjct: 435 SLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS 494
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL + N+L+ MY+KC C+D A +F + K+VI+WT+II+G N + +L F+
Sbjct: 495 GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFY 554
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVR 546
M+ + +P+ +T + +L AC+ G + G++ ++ G+ ++D++ R
Sbjct: 555 DAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGR 614
Query: 547 CGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAE 584
G++ A + + D + W LL+ LAE
Sbjct: 615 SGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAE 654
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 250/467 (53%), Gaps = 18/467 (3%)
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA--LSLYQRMFWVGGVKPDVY 198
+ G L A ++F ++ D+ ++N LI Y+ + A L LY+RM V P+ Y
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLR-HRVAPNNY 126
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TFP L+ C + D G+ +H H I G +AD+ V AL+ MYVKC L A +F M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 259 PKRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P RD ++WNAM++GY +G Y + +L + M+ + P+ TL +++ G
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 317 GREVHGYVI----------KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
G VH Y I K +D V + L+ MY G+ +VF M +++ V+
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W+ +I + +A ++ M A+G +IAS L ACA L +L +G +LH L
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++G+ + + N+L+ MY+K ID+A+ +F ++ K+ +S+++++ G N R+ EA
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ F+KM N++P++ T+VS++ AC+ + AL G+ H + G+A + + NAL+DMY
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 545 VRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CGR+ + FN RD+ +WN ++ GY G G A F +M
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 227/457 (49%), Gaps = 18/457 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS-LYQRMFWV 190
+ A L M+VK L A ++F M RDL +WN ++ GYA G + A++ L +
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD----------VDVVNALIT 240
++P+ T +L L +G VH + IR ++ V + AL+
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLD 281
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
MY KCG L+ AR VFD MP R+ ++W+A+I G+ + +LF M+ + L
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+++S + A + ++G ++H + K G D++ N L+ MY G ++ +F M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD VS++ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL S I N LIDMY+KC ID + +VF+ +P ++++SW ++I G ++
Sbjct: 462 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA F +M L P+ VT + +LSAC+ G ++ GK H +R G + +
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF-HVMRHGYGLTPRMEH 580
Query: 539 --ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++D+ R G + A+ S DV W LL
Sbjct: 581 YICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 225/466 (48%), Gaps = 19/466 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQEL--NICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N+ L +G A+ +L SMQ + + LV L+ L + +G +H+
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYR 254
Query: 122 SKTMSHLS----------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+ H + V LG A L M+ K G L +A VF M R+ +W+ LIGG+
Sbjct: 255 IRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 314
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+A L++ M G + LR C + L+ G+++H + + G AD
Sbjct: 315 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD 374
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ N+L++MY K G + +A +FD M +D +S++A++SGY +NG + ++F M+
Sbjct: 375 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+PD T+ S+I A + + GR HG VI G + + S+CN LI MY G +
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF+ M S+D+VSW TMI+ Y L +A + M G PD +T +LSAC+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 412 LGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWT 469
G + G H + GL + ++D+ S+ +D+A E +P + +V W
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ R+ ++ + +M+ L P N V L +I SA R
Sbjct: 615 ALLGACRV-YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 659
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 281/544 (51%), Gaps = 4/544 (0%)
Query: 56 SSIATKNP-NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
S +++ P NS ++ G L QAL + M + D LV+ C + +
Sbjct: 94 SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+L VS + + ++ + ++++G + A +F ++ +D WNV++ GYAK
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G D + + M + + P+ TF CVL C + G ++H V+ G + + +
Sbjct: 214 GASDSVIKGFSLM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSI 272
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L++MY KCG A +F M + D ++WN MISGY ++G + L+ F M V
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD +T SS++ + + + R++H Y+++ S D+ + + LI Y +K
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQK 392
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+FS+ S DVV +T MIS Y + L A+E ++ + P+EIT+ S+L L
Sbjct: 393 IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG +LH ++ G + I +IDMY+KC ++ A E+F ++ ++++SW S+I
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
++ A+ FR+M ++ + + V++ + LSACA + + GK IH ++ +A D
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALD 572
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ + L+DMY +CG +K A N F++ E+++ +WN ++ Y G+ + F +M++
Sbjct: 573 VYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVE 632
Query: 593 SKGN 596
GN
Sbjct: 633 KSGN 636
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 4/396 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR- 261
+L+ C + L++GK+VH VI D ++ MY CG +F + R
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 262 -DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
WN++IS + G + L + M V PD T ++ A + + K +
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
V +G + V + LIK YL +G + K+F R+ KD V W M++ Y
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
D ++ + +M + P+ +T VLS CA +DLG++LH L + +GL I N+L
Sbjct: 217 DSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSL 276
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ MYSKC D A+++F + + ++W +I G + E+LIFF +M+ + + P++
Sbjct: 277 LSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDA 336
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T S+L + ++ L ++IH + +R ++ D FL +AL+D Y +C + A F+
Sbjct: 337 ITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ 396
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
N DV + +++GY G A E FR ++ K
Sbjct: 397 CNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK 432
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 217/449 (48%), Gaps = 14/449 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +E++L + M + D +L+ + +H + + L + L
Sbjct: 314 SGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFL 373
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + + K + A +F + D+ + +I GY G +AL +++ W+
Sbjct: 374 TSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFR---WLVK 430
Query: 193 VK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
VK P+ T +L GG+ LK G+E+H +I+ G++ ++ A+I MY KCG +
Sbjct: 431 VKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 490
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F + KRD +SWN+MI+ ++ + +F M + D +++S+ +SA
Sbjct: 491 AYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACAN 550
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ E G+ +HG++IK + DV + LI MY GN + VF M+ K++VSW ++
Sbjct: 551 LPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSI 610
Query: 371 ISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRT 428
I+ Y L D ++M+E G+ PD+IT ++S C +G++D G++ + +
Sbjct: 611 IAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDY 670
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLRLNNRSFEAL 485
G+ ++D++ + + +A E + PD V W +++ RL+ A
Sbjct: 671 GIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGV--WGTLLGASRLHKNVELAK 728
Query: 486 IFFRKMMLNLKP-NSVTLVSILSACARIG 513
+ ++M +L P NS V I +A A G
Sbjct: 729 VASSRLM-DLDPWNSGYYVLISNAHANTG 756
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + + + A+ M IC D ++ + C G +H + K
Sbjct: 507 NSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIK 566
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L V + + M+ K G+L A VF M ++++ SWN +I Y G ++L L
Sbjct: 567 HSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCL 626
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
+ M G +PD TF ++ C V D+ G + + +G + + ++ ++
Sbjct: 627 FHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLF 686
Query: 243 VKCGDLVRARLVFDGMP 259
+ G L A MP
Sbjct: 687 GRAGRLSEAYETVKSMP 703
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 253/485 (52%), Gaps = 17/485 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L + FG ++ VF ++ + ++F WN +I G FD+A+ LY M G
Sbjct: 50 LLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRG-G 108
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ +T P VL+ C D++ G ++H +++ GY+ DV V +L+++YVKC + A
Sbjct: 109 GFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD +P ++ +SW A+I+GY +G + + + F + E+ + PD +L V++A +
Sbjct: 169 LKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD G + Y+ G +V V L+ MY+ GN E +FS M KD+VSW+TMI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + LP +A++ + M++E PD T+ VLSACA LG LDLGI L R +
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFL 348
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++ LIDMYSKC + +A E+F + K+ + W ++++GL +N + F +
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLV 408
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
+ ++P+ T + +L C G + G++ + R+ P+ ++D+
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVF----SLTPSIEHYGCMVDLLG 464
Query: 546 RCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID----SKGNWRK 599
R G + A N+ +A W LL G LAE+ +K+I+ + GN+ +
Sbjct: 465 RAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQ 524
Query: 600 LMGLF 604
L ++
Sbjct: 525 LSNIY 529
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 193/373 (51%), Gaps = 2/373 (0%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H ++R + D ++N ++ + G ++LVF + + + WN MI G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L+ MR P+ T+ V+ A D +LG ++H ++K G+ DV V
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+ +Y+ N ++ KVF + K+VVSWT +I+ Y S +A+ ++ + G
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD ++ VL+ACA LG+ G + + +G+ + +A +L+DMY KC +++A +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGAL 515
F +P+K+++SW+++I G N +AL +FF+ NLKP+ T+V +LSACA +GAL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGY 574
G + R + L AL+DMY +CG + AW F + +R D WN ++ G
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392
Query: 575 AERGQGALAEEFF 587
+ G F
Sbjct: 393 SMNGHAKAVFSLF 405
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 217/454 (47%), Gaps = 8/454 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L + A+ SM+ + + +++ C K GL +HS++ K
Sbjct: 83 NTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + + LS++VK + A VF + D+++ SW +I GY +G F EA+
Sbjct: 143 AGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGA 202
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ + G+KPD ++ VL C + D G+ + ++ G +V V +L+ MYV
Sbjct: 203 FKKLLEM-GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYV 261
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L RA L+F MP++D +SW+ MI GY NG + L LF M+ + PD T+
Sbjct: 262 KCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVG 321
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA +G LG + + F + + LI MY G+ + ++F+ M+ KD
Sbjct: 322 VLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W M+ + + ++E G PDE T +L C G ++ G +
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
R L I ++D+ + +++A ++ + +P K N + W +++ G +L+ +
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 482 FEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
A +K ++ L+P N V L +I S R
Sbjct: 502 HLAEQVLKK-LIELEPWNSGNYVQLSNIYSGNHR 534
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 261/501 (52%), Gaps = 22/501 (4%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIG 169
Y +G H + ++ + + N+ LS++ + + A+ +FG+M R D+ SW+V+IG
Sbjct: 164 YSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIG 222
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G+ + G ++ +++ M G+ PD T VL+ C + D+ G VH VI G E
Sbjct: 223 GFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLE 282
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D+ V N+LI MY KC ++ A F +P+++ ISWN M+S Y N +++ L L M
Sbjct: 283 DDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTM 342
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ D +TL++V+ ++ D R VHG +I+ G+ + + N +I Y
Sbjct: 343 VREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLV 402
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF M KDVV+W+TMI+ + + PD+A+ ++ M E +P+ ++I +++ AC
Sbjct: 403 ELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEAC 461
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L H +A+R GL S + I ++IDMYSKC I+ ++ F+QIP KNV+ W+
Sbjct: 462 AVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWS 521
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-----KEIHA 523
++I R+N + EAL+ F K+ N KPN+VT +S+LSAC+ G + G +
Sbjct: 522 AMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQK 581
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA----WNILLT-----GY 574
H + G+ + ++DM R G+ A +++ A W LL+ G
Sbjct: 582 HGIEPGLEH----YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGN 637
Query: 575 AERGQGALAEEFFRKMIDSKG 595
G GA + + + S G
Sbjct: 638 ISLGSGAASRVLQLEPLSSAG 658
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 214/422 (50%), Gaps = 8/422 (1%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G + EAL LY + G D + P +L+ C G +H +I+ G ++
Sbjct: 25 SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTS-FNLGTAMHGCLIKQGCQSSTS 83
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ N+ I Y+K GDL A+ FD +D +SWN M+ G F NG M GL FI R
Sbjct: 84 IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ +L VI A + G HGY+ + GFS +SV N L+ +Y +
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAY 202
Query: 354 KVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACAC 411
K+F M + DVVSW+ MI + ++ ++ M E + PD +T+ SVL AC
Sbjct: 203 KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTN 262
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L ++ LG +H L + GL + + N+LIDMYSKC + A + F +IP+KN+ISW +
Sbjct: 263 LKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLM 322
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR-IGALMCGKEIHAHALRIG 529
+ LN EAL M+ + + VTL ++L + +L C + +H +R G
Sbjct: 323 LSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKG 381
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ L N+++D Y +C ++ A F+ N++DV AW+ ++ G+A G+ A F+
Sbjct: 382 YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFK 441
Query: 589 KM 590
+M
Sbjct: 442 QM 443
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 277/554 (50%), Gaps = 19/554 (3%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNIC----VDEDALVNLVRLCEWKRGYDEGLYLHSV 120
S++ + +G+ ++AL+ E+ I D L ++++ C ++ G +H
Sbjct: 17 SKIKDASYSGNWQEALQLY---HEIRISGAQLSDTWVLPSILKACS-NTSFNLGTAMHGC 72
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ K S + N+ + ++K+GDL A F ++D SWNV++ G G
Sbjct: 73 LIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAG 132
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + + + +P++ + V++ + +G H ++ R G+ A + V N+L++
Sbjct: 133 LCWFIKGRF-AHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLS 191
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFM 299
+Y + +L + + D +SW+ MI G+ + GE +G ++F M+ E + PD +
Sbjct: 192 LYAEVHMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGV 251
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ SV+ A + D LG VHG VI G DD+ V N LI MY N K F +
Sbjct: 252 TVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI 311
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLD 416
K+++SW M+S Y +L + +E + M EG+ DE+T+A+VL +
Sbjct: 312 PEKNIISWNLMLSAY---ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSL 368
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+H + +R G S ++ N++ID Y+KC ++ A VF + K+V++W+++I G
Sbjct: 369 KCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFA 428
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N + EA+ F++M + PN+V++++++ ACA L K H A+R G+A + +
Sbjct: 429 RNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAI 488
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID--S 593
+++DMY +CG ++ + FN +++V W+ +++ + G A F K+ +
Sbjct: 489 GTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGT 548
Query: 594 KGNWRKLMGLFRKC 607
K N + L C
Sbjct: 549 KPNAVTALSLLSAC 562
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 272/514 (52%), Gaps = 21/514 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSV 130
NG AL SM D+ AL + VR C G ++ H++ S+ S L V
Sbjct: 130 NGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIV 189
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA ++M+ K G + + +F ++ D+DL SW +I G+A+ GF EAL +++ M
Sbjct: 190 Q--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVE 247
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P+ + F R CG V + G+++H I++ + D+ V +L MY +C +L
Sbjct: 248 GSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDS 307
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR+ F + D +SWN++++ Y G + L+LF MR+ + PD +T+ ++ A
Sbjct: 308 ARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCA--C 365
Query: 311 VGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
VG + L GR +H Y++K+G DVSVCN L+ MY + VF ++ +DVV+W
Sbjct: 366 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWN 425
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++++ P++ ++ + ++ D I++ +VLSA A LG ++ ++H A +
Sbjct: 426 SILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKA 485
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
GL+ +++NTLID Y+KC +D A+ +F + +++V SW+S+I+G + EA
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 545
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALL 541
F +M L ++PN VT + +L+AC+R+G + G + I G +P + ++
Sbjct: 546 FSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVPTREHCSCIV 601
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
D+ R G++ A N + E D+ W LL
Sbjct: 602 DLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 635
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 262/525 (49%), Gaps = 24/525 (4%)
Query: 101 LVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRL------GNAFLSMFVKFGDLGHAWYVF 153
LV C R +G +H +V+ + S +L GN ++M+ + A VF
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M R+ SW +I + + G +AL L+ M G D + +R C + D+
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML-RSGTAADQFALGSAVRACTELGDV 168
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G++VH H ++ +D+ V NAL+TMY K G + ++F+ + +D ISW ++I+G+
Sbjct: 169 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 228
Query: 274 FENGEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
+ G M+ L +F RE++V+ P+ S A VG + G ++HG IK
Sbjct: 229 AQQGFEMEALQVF---REMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRL 285
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D+ V L MY N + F R+E+ D+VSW ++++ Y L +A+ +
Sbjct: 286 DRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G PD IT+ +L AC L G +H ++ GL + + N+L+ MY++C
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS---VTLVSIL 506
+ A++VFH+I D++V++W SI+ +N E L F +LN S ++L ++L
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVL 463
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDV 564
SA A +G K++HA+A + G+ D L N L+D Y +CG + A F N RDV
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+W+ L+ GYA+ G A + F +M + + N +G+ C
Sbjct: 524 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTAC 568
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 206/390 (52%), Gaps = 10/390 (2%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVV------NALITMYVKCGDLVRAR 252
+ ++ C + L +G+ VH H++ + D + N LITMY +C AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP R+ +SW ++I+ + +NG L LF M D L S + A +G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR+VH + +K D+ V N L+ MY G ++G +F R++ KD++SW ++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 373 CYEGSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A++ ++ M EGS P+E S AC +G+ + G ++H L+++ L
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + +L DMY++CK +D A F++I +++SW SI+ + EAL+ F +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L+P+ +T+ +L AC AL G+ IH++ +++G+ D + N+LL MY RC +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
A + F+ ++DV WN +LT A+
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNH 436
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 12/317 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N + G L +AL M++ + D + L+ C + G +HS + K
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ LSM+ + DL A VF ++ D+D+ +WN ++ A+ +E L L
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 184 YQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ + +P D + VL + + K+VH + + G D + N LI
Sbjct: 444 FSLL---NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y KCG L A +F+ M RD SW+++I GY + G + LF MR + + P+ +T
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 560
Query: 301 LSSVISASELVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
V++A VG G + Y I + G C+ ++ + G E
Sbjct: 561 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 358 RME-SKDVVSWTTMISC 373
+M D++ W T+++
Sbjct: 619 QMPFEPDIIMWKTLLAA 635
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 272/514 (52%), Gaps = 21/514 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSV 130
NG AL SM D+ AL + VR C G ++ H++ S+ S L V
Sbjct: 113 NGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIV 172
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA ++M+ K G + + +F ++ D+DL SW +I G+A+ GF EAL +++ M
Sbjct: 173 Q--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVE 230
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P+ + F R CG V + G+++H I++ + D+ V +L MY +C +L
Sbjct: 231 GSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDS 290
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR+ F + D +SWN++++ Y G + L+LF MR+ + PD +T+ ++ A
Sbjct: 291 ARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCAC-- 348
Query: 311 VGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
VG + L GR +H Y++K+G DVSVCN L+ MY + VF ++ +DVV+W
Sbjct: 349 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWN 408
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++++ P++ ++ + ++ D I++ +VLSA A LG ++ ++H A +
Sbjct: 409 SILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKA 468
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
GL+ +++NTLID Y+KC +D A+ +F + +++V SW+S+I+G + EA
Sbjct: 469 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 528
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALL 541
F +M L ++PN VT + +L+AC+R+G + G + I G +P + ++
Sbjct: 529 FSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVPTREHCSCIV 584
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
D+ R G++ A N + E D+ W LL
Sbjct: 585 DLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 618
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 256/520 (49%), Gaps = 31/520 (5%)
Query: 101 LVRLCEWKRGYDEG--LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
LV C R +G ++ H V S + S + GN L H ++G
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLG--------NHLITMYG---- 97
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R+ SW +I + + G +AL L+ M G D + +R C + D+ G++
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSML-RSGTAADQFALGSAVRACTELGDVGTGRQ 156
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH H ++ +D+ V NAL+TMY K G + ++F+ + +D ISW ++I+G+ + G
Sbjct: 157 VHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGF 216
Query: 279 YMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
M+ L +F RE++V+ P+ S A VG + G ++HG IK D+
Sbjct: 217 EMEALQVF---REMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLY 273
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L MY N + F R+E+ D+VSW ++++ Y L +A+ + M G
Sbjct: 274 VGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG 333
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD IT+ +L AC L G +H ++ GL + + N+L+ MY++C + A+
Sbjct: 334 LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM 393
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS---VTLVSILSACAR 511
+VFH+I D++V++W SI+ +N E L F +LN S ++L ++LSA A
Sbjct: 394 DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVLSASAE 451
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNI 569
+G K++HA+A + G+ D L N L+D Y +CG + A F N RDV +W+
Sbjct: 452 LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSS 511
Query: 570 LLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
L+ GYA+ G A + F +M + + N +G+ C
Sbjct: 512 LIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTAC 551
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 27/390 (6%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVV------NALITMYVKCGDLVRAR 252
+ ++ C + L +G+ VH H++ + D + N LITMY
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMY---------- 96
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
R+ +SW ++I+ + +NG L LF M D L S + A +G
Sbjct: 97 -------GRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR+VH + +K D+ V N L+ MY G ++G +F R++ KD++SW ++I+
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 373 CYEGSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A++ ++ M EGS P+E S AC +G+ + G ++H L+++ L
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + +L DMY++CK +D A F++I +++SW SI+ + EAL+ F +M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L+P+ +T+ +L AC AL G+ IH++ +++G+ D + N+LL MY RC +
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 389
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
A + F+ ++DV WN +LT A+
Sbjct: 390 SSAMDVFHEIKDQDVVTWNSILTACAQHNH 419
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 13/295 (4%)
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++++SA + GR VH +++ S +P ++ GN G + + M
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVAS------SSSSPDAQLA---GNTVLGNHLIT-MYG 97
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
++ VSW ++I+ + + A+ + M G+ D+ + S + AC LG++ G ++
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A+++ S +I+ N L+ MYSK +D +F +I DK++ISW SII G
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217
Query: 482 FEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
EAL FR+M++ + PN S AC +G+ G++IH +++ + D ++ +
Sbjct: 218 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCS 277
Query: 540 LLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
L DMY RC + A F E D+ +WN ++ Y+ G + A F +M DS
Sbjct: 278 LSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 332
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 141/317 (44%), Gaps = 12/317 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N + G L +AL M++ + D + L+ C + G +HS + K
Sbjct: 307 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 366
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ LSM+ + DL A VF ++ D+D+ +WN ++ A+ +E L L
Sbjct: 367 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 426
Query: 184 YQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ + +P D + VL + + K+VH + + G D + N LI
Sbjct: 427 FSLL---NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 483
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y KCG L A +F+ M RD SW+++I GY + G + LF MR + + P+ +T
Sbjct: 484 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 543
Query: 301 LSSVISASELVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
V++A VG G + Y I + G C+ ++ + G E
Sbjct: 544 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 601
Query: 358 RME-SKDVVSWTTMISC 373
+M D++ W T+++
Sbjct: 602 QMPFEPDIIMWKTLLAA 618
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 256/495 (51%), Gaps = 10/495 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
L++ C +R EG LH + ++ S L + M+ K G L A F ++ D
Sbjct: 18 ARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIAD 77
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++ F WN++I GYA++G EAL L+ +M + P+ + F L C G+ DL++G+E
Sbjct: 78 KNDFVWNLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGRE 133
Query: 219 VHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H V+ +DV V N+L+TMY +CG ++ +FD MP+++ +SWNAMIS + +
Sbjct: 134 IHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCD 193
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L L+ M+ ++P+ +S+++A +G+ +LG +H + +G D+ + N
Sbjct: 194 YPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMEN 253
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI MY G +E +VFS + ++DV +WT+MI+ Y +A Y M + P
Sbjct: 254 ALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSP 313
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
T ++LSAC+ L+ G LH+ G S ++ L+ MYS+C ++ A +F
Sbjct: 314 TSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLF 370
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
++ K+ +SW++++ +AL FR+M+L ++ + T S L AC+
Sbjct: 371 AKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSR 430
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K I G+ + L+ Y +CG M+ A F+ E RDV W +++ GYA
Sbjct: 431 LSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYA 490
Query: 576 ERGQGALAEEFFRKM 590
++G A E F +M
Sbjct: 491 QQGDSKAALELFHRM 505
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 216/401 (53%), Gaps = 9/401 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ +V + +L+ C ++ G+ +H + R GY + ++ MY KCG L A+
Sbjct: 11 ESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKA 70
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
FD + ++ WN MISGY +G+ + L LF M + P+ +S ++A +GD
Sbjct: 71 AFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASALAACAGLGD 127
Query: 314 EKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GRE+H V++ + DV V N L+ MY G+ EG K+F M K++VSW MIS
Sbjct: 128 LEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMIS 187
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ P++A+E Y M+ E P+ AS+L+ACA LGNL+LG +HQ GL
Sbjct: 188 AFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQR 247
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I++ N LI+MYSKC C+D+ALEVF + ++V +WTS+I G EA F+ M
Sbjct: 248 DIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMR 307
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + P S T V++LSAC+ L GK +H G + AL+ MY RCG ++
Sbjct: 308 RDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLE 364
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F ++D +W+ ++T +A+ G A FR+MI
Sbjct: 365 DAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMI 405
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 249/485 (51%), Gaps = 11/485 (2%)
Query: 112 DEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
++G +H V ++ S S V + N+ ++M+ + G + +F M ++L SWN +I
Sbjct: 129 EQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISA 188
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ + + ++AL LY RM ++P+ + F +L C + +L+ G +H + G +
Sbjct: 189 FVQCDYPEQALELYHRM-KRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQR 247
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ + NALI MY KCG + A VF G+ RD +W +MI+GY + G + + MR
Sbjct: 248 DIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMR 307
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V P T +++SA + + G+ +H V GF V L+ MY G+ E
Sbjct: 308 RDCVSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLE 364
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ E +F++M+ KD VSW+ M++ + P KA+ ++ M EG T S L AC+
Sbjct: 365 DAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACS 424
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L + +L +G+ I L+ YSKC +++A ++F ++ ++V++WT
Sbjct: 425 LKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTV 484
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI- 528
+I G S AL F +M ++P+SVT S+L AC+ L G+E+HA L
Sbjct: 485 MIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQ 541
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFF 587
G FL N L++MY RCG M+ A F S +R +W+ ++T A GQ + +
Sbjct: 542 GGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTY 601
Query: 588 RKMID 592
R M++
Sbjct: 602 RLMVN 606
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 251/508 (49%), Gaps = 25/508 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQAL+ M+ + + +L+ C + G +H ++ + + NA
Sbjct: 196 EQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENAL 255
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K G + A VF + RD+F+W +I GYA+ GF EA + Y M V P
Sbjct: 256 INMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGM-RRDCVSPT 314
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF +L C L++GK +H V FG+E+ V AL+ MY +CG L A +F
Sbjct: 315 SATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFA 371
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M ++D +SW+AM++ + + G+ K L LF M + T S + A L D +L
Sbjct: 372 KMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRL 431
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+ + + G S+ L+ Y G+ EE K+F RMES+DV++WT MI Y
Sbjct: 432 SKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQ 491
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGLISYI 434
A+E + M+ EG PD +T +SVL AC+ NL+ G ++H LA + G +S
Sbjct: 492 QGDSKAALELFHRMKPEGVEPDSVTFSSVLQACS---NLEDGREVHARILAAQGGKMSDF 548
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ N LI+MY++C + A ++F + + ISW S I+ L + + +I ++M+N
Sbjct: 549 L-GNGLINMYARCGSMRDARQIFESMDRSSRISW-SAIMTLCARHGQHDDIIDTYRLMVN 606
Query: 495 --LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN------ALLDMYVR 546
+ P+ VTL++IL++C+ G + + H I D LP+ ++D+ R
Sbjct: 607 EGVVPDGVTLIAILNSCSHAG--LTDEACHYFTWIIS---DFELPHLDEHYQCMVDLLCR 661
Query: 547 CGRMKPAWNQFNSNER-DVSAWNILLTG 573
GR+ A + +R DV N +L
Sbjct: 662 AGRLDEAEELISMIDRPDVVTLNTMLAA 689
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 13/264 (4%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S + K GD+ A +F +M RD+ +W V+I GYA+ G AL L+ RM GV+P
Sbjct: 454 LVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRM-KPEGVEP 512
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF VL+ C + D G+EVH ++ + G +D + N LI MY +CG + AR
Sbjct: 513 DSVTFSSVLQACSNLED---GREVHARILAAQGGKMSDF-LGNGLINMYARCGSMRDARQ 568
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ M + RISW+A+++ +G++ + + +M V PD +TL +++++ G
Sbjct: 569 IFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGL 628
Query: 314 EKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
++I ++ D+ C ++ + G +E E++ S ++ DVV+ TM
Sbjct: 629 TDEACHYFTWIISDFELPHLDEHYQC--MVDLLCRAGRLDEAEELISMIDRPDVVTLNTM 686
Query: 371 I-SCYEGSVLPDKAVETYQMMEAE 393
+ +C L A QM E
Sbjct: 687 LAACKNQQDLHRGARTAAQMQSTE 710
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 272/541 (50%), Gaps = 18/541 (3%)
Query: 71 CLNGSLEQ-ALKYLDSMQELNICVDEDALVNLVRLCE---WKRGYDEGLYLHSVVSKTMS 126
C LE A L M+E ++ + AL +LV CE W+ G G +H++ +
Sbjct: 16 CARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGL 75
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+V +G A L ++ G + +A +F +M R++ SW ++ + G +EAL Y+R
Sbjct: 76 MGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRR 135
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M GV + V+ CG + D G +V HV+ G V V N+LITM+
Sbjct: 136 MR-KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLR 194
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A +FD M +RDRISWNAMIS Y Y K ++ MR V PD TL S++S
Sbjct: 195 RVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVS 254
Query: 307 ---ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+S+LV LG +H + G V + N L+ MY + G +E E +F M +D
Sbjct: 255 VCASSDLVA---LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRD 311
Query: 364 VVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
V+SW TMIS Y S +A+ET Q+++ + P+ +T +S L AC+ L G +H
Sbjct: 312 VISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIH 371
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ ++ L + ++I N+L+ MYSKC ++ VF +P +V+S + G
Sbjct: 372 AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVA 431
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNAL 540
A+ F M +KPN +T++++ C +G L G +HA+ + G+ D ++ N+L
Sbjct: 432 NAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSL 491
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+ MY CG ++ + F+ N + V +WN ++ G+G EE + +DS+ K
Sbjct: 492 ITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRG---EEAIKLFMDSQHAGNK 548
Query: 600 L 600
L
Sbjct: 549 L 549
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 262/544 (48%), Gaps = 11/544 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL--HSVVSKTMSHLSV 130
NG +E+AL M++ + + +AL +V LC GL + H VVS ++H+SV
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ ++MF + A +F +M +RD SWN +I Y+ + + + M
Sbjct: 183 --ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH- 239
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G VKPDV T ++ C + G +H + G V ++NAL+ MY G L
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +RD ISWN MIS Y ++ ++ L L +++ P+ MT SS + A
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +H +++ + + + N L+ MY + E+ E+VF M DVVS
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRT 428
+ Y A+ + M G P+ IT+ ++ C LG+L G+ LH +T
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IF 487
GL+S I N+LI MY+ C ++ + +F +I +K+VISW +II + R EA+ +F
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLF 539
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
K + L LS+ A + +L G ++H +++ G+ D + NA +DMY +C
Sbjct: 540 MDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKC 599
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLF 604
G+M + R WN L++GYA G AE+ F+ M+ K ++ + L
Sbjct: 600 GKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALL 659
Query: 605 RKCQ 608
C
Sbjct: 660 SACS 663
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 209/433 (48%), Gaps = 2/433 (0%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L M+ + D L +LV +C G +HS+ + H SV L NA ++M+
Sbjct: 234 LSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYST 293
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A +F M RD+ SWN +I Y ++ EAL ++ P+ TF
Sbjct: 294 AGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSS 353
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L C L G+ +H +++ + + + N+L+TMY KC + VF+ MP D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYD 413
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVH 321
+S N + GY + + +F MR + P+++T+ ++ + +GD G +H
Sbjct: 414 VVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
YV + G D + N LI MY + G+ E +FSR+ +K V+SW +I+ +
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A++ + + G+ D +A LS+ A L +L+ G++LH L+++ GL + N +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY KC +D L+ + W ++I G EA F+ M+ + KP+ V
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYV 653
Query: 501 TLVSILSACARIG 513
T V++LSAC+ G
Sbjct: 654 TFVALLSACSHAG 666
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 9/461 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPD 212
M R SW + G A+ G A +L R+ V + ++ C G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLL-RVMRERDVPLSGFALASLVTACEHRGWQEG 59
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
G +H R G +V + AL+ +Y G ++ A+ +F MP+R+ +SW A++
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
NG + L+ + MR+ V + L++V+S + DE G +V +V+ G
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
VSV N LI M+ + ++ E++F RME +D +SW MIS Y + K M
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD T+ S++S CA + LG +H L + +GL + + N L++MYS +D+
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACA 510
A +F + ++VISW ++I +N EAL +++ + PNS+T S L AC+
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
ALM G+ IHA L+ + + N+LL MY +C M+ F S DV + N+
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 570 LLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
L GYA A A F M + K N+ ++ L C+
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCK 460
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 182/394 (46%), Gaps = 8/394 (2%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C G +H+++ + + +GN+ L+M+ K + VF M D+ S
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHV 223
NVL GGYA A+ ++ M G +KP+ T + TC + DL G +H +V
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ G +D + N+LITMY CGDL + +F + + ISWNA+I+ +G + +
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF+ + D L+ +S+S + + G ++HG +K G D V N + MY
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G + K + W T+IS Y +A +T++ M + G PD +T
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656
Query: 404 SVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
++LSAC+ G +D G+ + +A G+ I ++D+ + +A + ++P
Sbjct: 657 ALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV 716
Query: 463 -KNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
N + W S++ ++R+ + L RK NL
Sbjct: 717 LPNDLIWRSLL----SSSRTHKNLDIGRKAAKNL 746
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 269/523 (51%), Gaps = 21/523 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVV 121
NS + E G +AL M++ + + ++ + C Y + ++ H V
Sbjct: 23 NSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVK 82
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
S+ + L V+ + + M+VK LG A+ +F +M RD+ SWN +I G+A+ GF D +
Sbjct: 83 SRFQADLFVQ--TSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVV 140
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
SL+ M + G++ D T + + + DLK + +H I+ G + DV V N I
Sbjct: 141 SLFCEM-GIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAA 199
Query: 242 YVKCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
Y KCG+ A VFDG+ K + +SWN+MI+GY + K + F M D
Sbjct: 200 YAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRAD-- 257
Query: 300 TLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+ + S V E L G+ +H + I++G D+ V N LI MY G+ +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M K VSWT MI+ Y D+A+ + MEA G PD +TI S++S C G L+L
Sbjct: 318 NMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALEL 377
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G + A GL +++ N LID+Y+KC +D A E+F+ +P+K+++SWT++I G L
Sbjct: 378 GKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCAL 437
Query: 478 NNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFD 533
N EAL +FF+ + L LKPN +T +++L AC G L G E + +I D
Sbjct: 438 NGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLD 497
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG 573
+ + + D+ R GR+K A+ +F N + DV W++LL+
Sbjct: 498 HY--SCMADLLGRKGRLKEAF-EFIQNMPFKPDVGIWSVLLSA 537
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 6/348 (1%)
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN+ I+ G K L+LF M++ ++P+ +T SV A + + K + VH +V+
Sbjct: 22 WNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVV 81
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K F D+ V ++ MY+ +FSRM +DV SW +MI + D+ V
Sbjct: 82 KSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVS 141
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M EG D +T+ + + L +L + +H ++ G+ + + ++NT I Y+
Sbjct: 142 LFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYA 201
Query: 446 KCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTL 502
KC A VF I K +SW S+I G + +A+ FF+KM+ + + T+
Sbjct: 202 KCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTI 261
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNE 561
+S+LS+C + L GK IHAH +++G D + N L+ MY +CG + A F N
Sbjct: 262 LSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLG 321
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+ +W ++ GYAE+G A F M + K + ++ L C
Sbjct: 322 KTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGC 369
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W + I+ KA+ ++ M+ G P+ +T SV AC+ L NL +H
Sbjct: 19 VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++ + + + +++DMY KC + A +F ++P ++V SW S+ILG
Sbjct: 79 HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDR 138
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ F +M + ++ +SVT++ + + + L + IH+ ++IG+ D + N +
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA 198
Query: 543 MYVRCGRMKPAWNQFNSNERDVS---AWNILLTGYAERGQGALAEEFFRKMI 591
Y +CG A F+ ++ + +WN ++ GYA Q + A FF+KM+
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKML 250
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 264/521 (50%), Gaps = 41/521 (7%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ALK + MQ+L + D+ A V ++ C
Sbjct: 262 GLPEEALKVFEDMQKLGLVPDQVAFVTVITAC---------------------------- 293
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
V G L A +F +M + ++ +WNV+I G+ K G EA+ ++ M W GV
Sbjct: 294 -------VGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNM-WKTGV 345
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
K T VL + L G VH I+ G ++V V ++LI MY KC + A+
Sbjct: 346 KSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKK 405
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + +R+ + WNAM+ GY +NG K + LF MR PD T +S++SA +
Sbjct: 406 VFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLEC 465
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
++GR++H ++IK F ++ V N L+ MY G EE + F + ++D VSW +I
Sbjct: 466 LEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVG 525
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y D+A ++ M +G PDE+++AS+LS CA L L+ G ++H +++GL +
Sbjct: 526 YVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTC 585
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ ++LIDMY KC I+ A VF +P ++V+S +II G N+ EA+ F++M
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQN 644
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMK 551
L P+ +T S+L AC L G++IH + G+ +DG FL +LL MY+ R
Sbjct: 645 EGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKT 704
Query: 552 PAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKM 590
A F+ + S W +++G+ + G A + +++M
Sbjct: 705 DADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEM 745
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
RLG+A + ++ K G++ A F ++ RD+ +WN ++ Y++ G ++ + + +
Sbjct: 117 RLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSL-QN 175
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV P+ +T+ VL +C + D+ GK+VH VI+ G+E + +LI MY KCG LV
Sbjct: 176 CGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVD 235
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +FD + D +SW AMI+GY + G + L +F M+++ + PD + +VI+A
Sbjct: 236 ARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITA--- 292
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ +G DD C+ +F +M + +VV+W M
Sbjct: 293 -------------CVGLGRLDD--ACD-----------------LFVQMPNTNVVAWNVM 320
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + +A++ ++ M G T+ SVLSA A L L+ G+ +H A++ GL
Sbjct: 321 ISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGL 380
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + ++LI+MY+KC+ ++ A +VF + ++N++ W +++ G N + + + F +
Sbjct: 381 NSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSE 440
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M P+ T SILSACA + L G+++H+ ++ ++ F+ N L+DMY +CG
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA 500
Query: 550 MKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A QF RD +WN ++ GY + A FR+MI
Sbjct: 501 LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 258/497 (51%), Gaps = 11/497 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L NG + +K M+ DE +++ C + G LHS + K
Sbjct: 419 NAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK 478
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + N + M+ K G L A F + +RD SWN +I GY + DEA ++
Sbjct: 479 HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNM 538
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM + G+ PD + +L C + L++G++VH +++ G + + ++LI MYV
Sbjct: 539 FRRMI-LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR VF MP R +S NA+I+GY +N + ++ + LF M+ ++P +T +S
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFAS 656
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCN-PLIKMYLSFGNREEGEKVFSRME-S 361
++ A LGR++H + K G D L+ MY++ + + + +FS +
Sbjct: 657 LLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYP 716
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K + WT +IS + + ++A++ YQ M + PD+ T ASVL AC+ L +L G +
Sbjct: 717 KSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMI 776
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN-VISWTSIILGLRLNNR 480
H L GL S + + ++DMY+KC + +++VF ++ KN VISW S+I+G N
Sbjct: 777 HSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGY 836
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFL 536
+ AL F +M ++P+ VT + +L+AC+ G + G+EI H+ +I D
Sbjct: 837 AENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCA 896
Query: 537 PNALLDMYVRCGRMKPA 553
++D+ R G +K A
Sbjct: 897 --CMIDLLGRWGFLKEA 911
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 249/515 (48%), Gaps = 38/515 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ GSLEQ + S+Q + ++ ++ C D G +H V K
Sbjct: 151 NSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK 210
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M+ K G L A +F + D D SW +I GY + G +EAL +
Sbjct: 211 MGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKV 270
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M +G V PD F V+ C G+
Sbjct: 271 FEDMQKLGLV-PDQVAFVTVITACVGL--------------------------------- 296
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
G L A +F MP + ++WN MISG+ + G ++ + F M + V TL S
Sbjct: 297 --GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGS 354
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA + G VH IK G + +V V + LI MY E +KVF ++ ++
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V W M+ Y + K ++ + M G PDE T S+LSACACL L++G +LH
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ + + NTL+DMY+KC +++A + F I +++ +SW +II+G E
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A FR+M+L+ + P+ V+L SILS CA + AL G+++H ++ G+ + ++L+D
Sbjct: 535 AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
MYV+CG ++ A F+ R V + N ++ GYA+
Sbjct: 595 MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ 629
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 198/379 (52%), Gaps = 37/379 (9%)
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ K +H ++FG+ + + +A++ +Y KCG++ A F+ + KRD ++WN+++S Y
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
G + + F ++ V P+ T + V+S+ + D LG++VH VIKMGF +
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
LI MY G+ + K+F + D VSWT MI+ Y LP++A++ ++ M+
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G +PD++ +V++AC LG L D A
Sbjct: 278 GLVPDQVAFVTVITACVGLGRL-----------------------------------DDA 302
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
++F Q+P+ NV++W +I G EA+ FF+ M +K TL S+LSA A +
Sbjct: 303 CDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
AL G +HA A++ G+ + ++ ++L++MY +C +M+ A F++ +ER++ WN +L
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAML 422
Query: 572 TGYAERGQGALAEEFFRKM 590
GYA+ G + + F +M
Sbjct: 423 GGYAQNGYASKVMKLFSEM 441
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 272/541 (50%), Gaps = 18/541 (3%)
Query: 71 CLNGSLEQ-ALKYLDSMQELNICVDEDALVNLVRLCE---WKRGYDEGLYLHSVVSKTMS 126
C LE A L M+E ++ + AL +LV CE W+ G G +H++ +
Sbjct: 16 CARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGL 75
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+V +G A L ++ G + +A +F +M R++ SW ++ + G +EAL Y+R
Sbjct: 76 MGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRR 135
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M GV + V+ CG + D G +V HV+ G V V N+LITM+
Sbjct: 136 MR-KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLR 194
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A +FD M +RDRISWNAMIS Y Y K ++ MR V PD TL S++S
Sbjct: 195 RVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVS 254
Query: 307 ---ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+S+LV LG +H + G V + N L+ MY + G +E E +F M +D
Sbjct: 255 VCASSDLVA---LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRD 311
Query: 364 VVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
V+SW TMIS Y S +A+ET Q+++ + P+ +T +S L AC+ L G +H
Sbjct: 312 VISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIH 371
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ ++ L + ++I N+L+ MYSKC ++ VF +P +V+S + G
Sbjct: 372 AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVA 431
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNAL 540
A+ F M +KPN +T++++ C +G L G +HA+ + G+ D ++ N+L
Sbjct: 432 NAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSL 491
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+ MY CG ++ + F+ N + V +WN ++ G+G EE + +DS+ K
Sbjct: 492 ITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRG---EEAIKLFMDSQHAGNK 548
Query: 600 L 600
L
Sbjct: 549 L 549
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 262/544 (48%), Gaps = 11/544 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL--HSVVSKTMSHLSV 130
NG +E+AL M++ + + +AL +V LC GL + H VVS ++H+SV
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ ++MF + A +F +M +RD SWN +I Y+ + + + M
Sbjct: 183 --ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH- 239
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G VKPDV T ++ C + G +H + G V ++NAL+ MY G L
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +RD ISWN MIS Y ++ ++ L L +++ P+ MT SS + A
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +H +++ + + + N L+ MY + E+ E+VF M DVVS
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRT 428
+ Y A+ + M G P+ IT+ ++ C LG+L G+ LH +T
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IF 487
GL+S I N+LI MY+ C ++ + +F +I +K+VISW +II + R EA+ +F
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLF 539
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
K + L LS+ A + +L G ++H +++ G+ D + NA +DMY +C
Sbjct: 540 MDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKC 599
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLF 604
G+M + R WN L++GYA G AE+ F+ M+ K ++ + L
Sbjct: 600 GKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALL 659
Query: 605 RKCQ 608
C
Sbjct: 660 SACS 663
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 209/433 (48%), Gaps = 2/433 (0%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L M+ + D L +LV +C G +HS+ + H SV L NA ++M+
Sbjct: 234 LSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYST 293
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A +F M RD+ SWN +I Y ++ EAL ++ P+ TF
Sbjct: 294 AGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSS 353
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L C L G+ +H +++ + + + N+L+TMY KC + VF+ MP D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYD 413
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVH 321
+S N + GY + + +F MR + P+++T+ ++ + +GD G +H
Sbjct: 414 VVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
YV + G D + N LI MY + G+ E +FSR+ +K V+SW +I+ +
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A++ + + G+ D +A LS+ A L +L+ G++LH L+++ GL + N +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY KC +D L+ + W ++I G EA F+ M+ + KP+ V
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYV 653
Query: 501 TLVSILSACARIG 513
T V++LSAC+ G
Sbjct: 654 TFVALLSACSHAG 666
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 9/461 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPD 212
M R SW + G A+ G A +L R+ V + ++ C G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLL-RVMRERDVPLSGFALASLVTACEHRGWQEG 59
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
G +H R G +V + AL+ +Y G ++ A+ +F MP+R+ +SW A++
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
NG + L+ + MR+ V + L++V+S + DE G +V +V+ G
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
VSV N LI M+ + ++ E++F RME +D +SW MIS Y + K M
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD T+ S++S CA + LG +H L + +GL + + N L++MYS +D+
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACA 510
A +F + ++VISW ++I +N EAL +++ + PNS+T S L AC+
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
ALM G+ IHA L+ + + N+LL MY +C M+ F S DV + N+
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419
Query: 570 LLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
L GYA A A F M + K N+ ++ L C+
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCK 460
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 182/394 (46%), Gaps = 8/394 (2%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C G +H+++ + + +GN+ L+M+ K + VF M D+ S
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHV 223
NVL GGYA A+ ++ M G +KP+ T + TC + DL G +H +V
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ G +D + N+LITMY CGDL + +F + + ISWNA+I+ +G + +
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF+ + D L+ +S+S + + G ++HG +K G D V N + MY
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G + K + W T+IS Y +A +T++ M + G PD +T
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656
Query: 404 SVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
++LSAC+ G +D G+ + +A G+ I ++D+ + +A + ++P
Sbjct: 657 ALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV 716
Query: 463 -KNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
N + W S++ ++R+ + L RK NL
Sbjct: 717 LPNDLIWRSLL----SSSRTHKNLDIGRKAAKNL 746
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 254/458 (55%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +V G L +A +F +M +R++ +WN++I G+AK G+ EA+ +Q M G+K
Sbjct: 268 INAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNM-RKAGIKST 326
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL + L G VH ++ G ++V V ++L++MY KCG + A+ VFD
Sbjct: 327 RSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFD 386
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +++ + WNAM+ GY +NG + + LF M+ PD T SS++SA + L
Sbjct: 387 TLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDL 446
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++H +IK F+ ++ V N L+ MY G E+ + F + ++D VSW +I Y
Sbjct: 447 GHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQ 506
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A ++ M G +PDE+++AS+LSACA + L+ G ++H L+++TG + +
Sbjct: 507 EEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYS 566
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
++LIDMY+KC ID A ++ +P+++V+S ++I G N +A+ FR M++ +
Sbjct: 567 GSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGI 625
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAW 554
+T S+L AC L G++IH+ L++G+ D FL +LL MY+ R A
Sbjct: 626 NSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDAS 685
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ SN + W +++G ++ +A + +++M
Sbjct: 686 VLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEM 723
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 239/461 (51%), Gaps = 38/461 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LGN + ++ K D+ +A F ++ D+D+ +WN ++ ++K GF + Y + W
Sbjct: 96 LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF-PHLVVKYFGLLWNS 154
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV P+ +TF VL +C + +K G++VH +V++ G+E+ ALI MY KC L A
Sbjct: 155 GVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDA 214
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FDG + D++SW +MI GY + G + + +F M +V +PD + +VI+A
Sbjct: 215 RSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA---- 270
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
Y+ G + +FSRM +++VV+W MI
Sbjct: 271 -------------------------------YVDLGRLDNASDLFSRMPNRNVVAWNLMI 299
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + +A+E +Q M G T+ SVLSA A L LD G+ +H A++ GL
Sbjct: 300 SGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH 359
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRK 490
S + + ++L+ MY+KC ++ A +VF + ++NV+ W +++ G N + E + +FF
Sbjct: 360 SNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNM 419
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
P+ T SILSACA + L G ++H+ ++ A + F+ NAL+DMY + G +
Sbjct: 420 KSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGAL 479
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A QF RD +WN+++ GY + A FR+M
Sbjct: 480 EDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRM 520
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 272/521 (52%), Gaps = 7/521 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+++ +M++ I L +++ D GL +H+ K H +V +G++ +
Sbjct: 310 EAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLV 369
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
SM+ K G + A VF + ++++ WN ++GGY + G+ +E + L+ M G PD
Sbjct: 370 SMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSC-GFYPDD 428
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ +L C + L G ++H +I+ + +++ V NAL+ MY K G L AR F+
Sbjct: 429 FTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFEL 488
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ RD +SWN +I GY + + ++ LF M + + PD ++L+S++SA V + G
Sbjct: 489 IRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQG 548
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++VH +K G + + LI MY G + K+ + M + VVS +I+ Y
Sbjct: 549 KQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGY-AQ 607
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIII 436
+ ++AV ++ M EG EIT AS+L AC L+LG ++H L ++ GL + +
Sbjct: 608 INLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFL 667
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+L+ MY A +F + + K+ + WT++I GL N+ S AL +++M N
Sbjct: 668 GVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCN 727
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ P+ T VS L ACA + ++ G E H+ G D +AL+DMY +CG +K +
Sbjct: 728 VLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSM 787
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S ++DV +WN ++ G+A+ G A F +M S
Sbjct: 788 QVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQS 828
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 223/444 (50%), Gaps = 38/444 (8%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A + M+ K L A +F + D SW +IGGY K G +EA+ ++Q M VG +
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ-E 258
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD F V V+NA YV G L A +
Sbjct: 259 PDQVAF-------------------------------VTVINA----YVDLGRLDNASDL 283
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F MP R+ ++WN MISG+ + G ++ + F MR+ + TL SV+SA +
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G VH +K G +V V + L+ MY G E +KVF + ++VV W M+ Y
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++ +E + M++ G PD+ T +S+LSACACL LDLG +LH + ++ S +
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL 463
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ N L+DMY+K ++ A + F I +++ +SW II+G EA FR+M +L
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLL 523
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ P+ V+L SILSACA + L GK++H +++ G + ++L+DMY +CG + A
Sbjct: 524 GILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSA 583
Query: 554 WNQFNS-NERDVSAWNILLTGYAE 576
ER V + N L+ GYA+
Sbjct: 584 HKILACMPERSVVSMNALIAGYAQ 607
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 278/572 (48%), Gaps = 36/572 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L NG + ++ +M+ D+ +++ C + D G LHSV+ K
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GNA + M+ K G L A F + +RD SWNV+I GY + EA L
Sbjct: 457 NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM + G+ PD + +L C V L++GK+VH ++ G E + ++LI MY
Sbjct: 517 FRRMNLL-GILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFE-NGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + A + MP+R +S NA+I+GY + N E + + LF M ++ +T +
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE--QAVNLFRDMLVEGINSTEITFA 633
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A LGR++H ++KMG DD + L+ MY++ + +FS +
Sbjct: 634 SLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSN 693
Query: 362 -KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K V WT MIS + A++ Y+ M + +PD+ T S L ACA + ++ G +
Sbjct: 694 PKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTE 753
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
H L TG S + ++ L+DMY+KC + +++VF ++ K+VISW S+I+G N
Sbjct: 754 THSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNG 813
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +AL F +M ++ P+ VT + +L+AC+ G + G+ I + V G P
Sbjct: 814 YAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLI----FDMMVNLYGMQPR 869
Query: 539 A-----LLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A ++D+ R G +K A N + E D W +L G ++ K+I
Sbjct: 870 ADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLI 929
Query: 592 D-----------------SKGNWRKLMGLFRK 606
+ + GNW ++ L R+
Sbjct: 930 ELEPQNSSPYVLLSNIYAASGNWDEVNTLRRE 961
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 186/377 (49%), Gaps = 39/377 (10%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H ++ G+ + + N ++ +Y KC D+ A F + +D ++WN+++S + +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + F ++ V P+ T + V+S+ + K GR+VH V+KMGF + +S C
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF-ESISYC 197
Query: 337 N-PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
LI MY + +F D VSWT+MI Y LP++AV+ +Q ME G
Sbjct: 198 EGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ 257
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD++ +V++A LG L D A +
Sbjct: 258 EPDQVAFVTVINAYVDLGRL-----------------------------------DNASD 282
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGA 514
+F ++P++NV++W +I G EA+ FF+ M +K TL S+LSA A + A
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L G +HA AL+ G+ + ++ ++L+ MY +CG+M+ A F++ NE++V WN +L G
Sbjct: 343 LDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGG 402
Query: 574 YAERGQGALAEEFFRKM 590
Y + G E F M
Sbjct: 403 YVQNGYANEVMELFFNM 419
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
K IHA +L++G G L N ++D+Y +C + A F ++D+ AWN +L+ ++++
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 578 GQGALAEEFFRKMIDSKGNW 597
G L ++F + +S G W
Sbjct: 139 GFPHLVVKYFGLLWNS-GVW 157
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 230/399 (57%), Gaps = 16/399 (4%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+P ++L +LEQ +K L++ E I +D + +L+ C + G+ +H ++
Sbjct: 63 HPKTKLE------ALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLI 116
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL--FSWNVLIGGYAKAGFFDE 179
++ H +V + + L ++ G L A +F +M RD F WN LI GYA+ G +DE
Sbjct: 117 PTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDE 176
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A++LY +M GV+ D++TFP VL+ C G+ ++ G+EVH H IR G+ AD ++NAL+
Sbjct: 177 AIALYFQMV-EEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALV 235
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCGD+V+AR VFD MP RD +SWN+M++ Y +G ++ + +F M +PD +
Sbjct: 236 DMYSKCGDIVKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSV 295
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
++S+V++ +G LG ++HG+VI G ++S+ N LI MY + G E+ VF+ M
Sbjct: 296 SISTVLTGVSSLG---LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLM 352
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DVVSW ++IS + +A+ ++ ME G PD+IT S+LSACA LG L G
Sbjct: 353 PERDVVSWNSIISAH---CKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDGE 409
Query: 420 KLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVF 457
+L L I I+ ++++Y + I KA +
Sbjct: 410 RLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSII 448
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 211/412 (51%), Gaps = 39/412 (9%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K D + +L TC + G VH + +V + + L+ +Y CG L A
Sbjct: 85 GIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDA 144
Query: 252 RLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+FD M KRD WN++ISGY + G Y + + L+ M E V+ D T V+
Sbjct: 145 HDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCA 204
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G ++G EVH + I+ GF+ D + N L+ MY G+ + KVF +M +D VSW +
Sbjct: 205 GIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWNS 264
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y L +A+ ++ M EG PD ++I++VL+ + LG LG+++H + G
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG---LGVQIHGWVISQG 321
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ IAN+LI MYS ++KA VF+ +P+++V+SW SII + + EAL FF
Sbjct: 322 HEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISA---HCKRREALAFFE 378
Query: 490 KMM-LNLKPNSVTLVSILSACARIG---------ALMCGKEIHAHALRIGVAFDGFLPNA 539
+M ++P+ +T VSILSACA +G ALMCGK +I + +
Sbjct: 379 QMEGAGVQPDKITFVSILSACAYLGLLKDGERLFALMCGK------YKIKPIMEHY--GC 430
Query: 540 LLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++++Y R G +K A++I++ G G L E + +I
Sbjct: 431 MVNLYGRAGLIK-------------KAYSIIVDGIGTEAAGVLDLEVYYVLI 469
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++ V+ + +G D AS+L C + GI++H+L + L + I++ L
Sbjct: 72 EQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKL 131
Query: 441 IDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKP 497
+ +Y+ C +D A ++F Q+ D + W S+I G EA+ ++F+ + ++
Sbjct: 132 LRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEA 191
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T +L CA IG++ G+E+H HA+R G A DGF+ NAL+DMY +CG + A F
Sbjct: 192 DLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVF 251
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ RD +WN +LT Y G A FR+M+
Sbjct: 252 DKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQML 286
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+K + S+L C R A++ G +H + + + + LL +Y CG + A
Sbjct: 86 IKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAH 145
Query: 555 NQFNS-NERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+ F+ +RD SA WN L++GYA+ G A + +M++
Sbjct: 146 DLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVE 186
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 274/548 (50%), Gaps = 50/548 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + LC EQAL+ +MQ N+ + LV++ C G GL L K
Sbjct: 163 NSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACS-NLGVMHGLRL----GK 217
Query: 124 TMSHLSVRLG-------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+ S+R+G NA ++M+ K G + + +F DRD+ SWN +I ++++
Sbjct: 218 QLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 277
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV- 235
F EAL+ + R+ + GV+ D T VL C + L GKE+H +V+R + V
Sbjct: 278 FSEALAFF-RLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-V 294
+AL+ MY C + R VFD + R WNAMISGY NG K L+LFI M +V +
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P+ T++SV+ A +HGY +K+GF +D V N L+ MY G + E
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKA-VETYQMMEAEGSM----------------P 397
+F ME +D VSW TMI+ Y S A V ++M E + P
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ IT+ +VL CA L + G ++H A+R L S I + + L+DMY+KC C++ + VF
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL------KPNSVTLVSILSACAR 511
+++P+KNVI+W +I+ ++ + EAL F+ M+ KPN VT +++ +AC+
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636
Query: 512 IGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD--- 563
G + G + H H GV ++D+ R G+++ A+ N+ +
Sbjct: 637 SGLISEGLNLFYRMKHDH----GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK 692
Query: 564 VSAWNILL 571
V AW+ LL
Sbjct: 693 VGAWSSLL 700
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 231/429 (53%), Gaps = 10/429 (2%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R SW + ++ F EA+S Y M V G +PD + FP VL+ G+ DLK G++
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMT-VSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113
Query: 219 VHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H ++FGY + V V N L+ MY KCG + VFD + RD++SWN+ I+
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG---DEKLGREVHGYVIKMGFSDDVS 334
++ + L F M+ ++ TL SV A +G +LG+++HGY +++G
Sbjct: 174 KWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTF 232
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N L+ MY G ++ + +F +D+VSW TMIS + S +A+ +++M EG
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 292
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKA 453
D +TIASVL AC+ L LD+G ++H +R LI + + L+DMY C+ ++
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACAR 511
VF I + + W ++I G N +ALI F +M+ L PN+ T+ S++ AC
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
A + IH +A+++G D ++ NAL+DMY R G+M + F+S E RD +WN +
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTM 472
Query: 571 LTGYAERGQ 579
+TGY G+
Sbjct: 473 ITGYVLSGR 481
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 254/491 (51%), Gaps = 26/491 (5%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + N ++M+ K G +G VF ++ DRD SWN I + +++AL ++ M
Sbjct: 127 SVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAM- 185
Query: 189 WVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ ++ +T V C G + L+ GK++H + +R G + NAL+ MY K
Sbjct: 186 QMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKL 244
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G + ++ +F+ RD +SWN MIS + ++ + + L F +M V+ D +T++SV+
Sbjct: 245 GRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVL 304
Query: 306 SASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
A + +G+E+H YV++ ++ V + L+ MY + E G +VF + + +
Sbjct: 305 PACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRI 364
Query: 365 VSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
W MIS Y + L +KA+ + +M++ G +P+ T+ASV+ AC +H
Sbjct: 365 ELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHG 424
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++ G + N L+DMYS+ +D + +F + ++ +SW ++I G L+ R
Sbjct: 425 YAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSN 484
Query: 484 ALIFFRKM--MLNL----------------KPNSVTLVSILSACARIGALMCGKEIHAHA 525
AL+ +M M N KPN++TL+++L CA + A+ GKEIHA+A
Sbjct: 485 ALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYA 544
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
+R +A D + +AL+DMY +CG + + FN ++V WN+L+ G+G A
Sbjct: 545 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 604
Query: 585 EFFRKMIDSKG 595
E F+ M+ G
Sbjct: 605 ELFKNMVAEAG 615
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 224/470 (47%), Gaps = 27/470 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ + +AL + M + +D + +++ C D G +H+ V +
Sbjct: 266 NTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLR 325
Query: 124 TMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ +G+A + M+ + VF + R + WN +I GYA+ G ++AL
Sbjct: 326 NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 385
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M V G+ P+ T V+ C + +H + ++ G++ D V NAL+ MY
Sbjct: 386 LFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMY 445
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV---------- 292
+ G + + +FD M RDR+SWN MI+GY +G Y L+L M+ +
Sbjct: 446 SRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDD 505
Query: 293 -------LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
P+ +TL +V+ + G+E+H Y I+ + D++V + L+ MY
Sbjct: 506 NDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAK 565
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-----SMPDEI 400
G +VF+ M +K+V++W +I ++A+E ++ M AE + P+E+
Sbjct: 566 CGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEV 625
Query: 401 TIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T +V +AC+ G + G+ L +++ G+ ++D+ + +++A E+ +
Sbjct: 626 TFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNT 685
Query: 460 IPDK--NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+P + V +W+S++ R+ +++ E K +L+L+PN + +LS
Sbjct: 686 MPAEFDKVGAWSSLLGACRI-HQNVELGEVAAKNLLHLEPNVASHYVLLS 734
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 8/344 (2%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P R SW + + ++ + + +I M PD +V+ A + D K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 319 EVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H +K G+ S V+V N L+ MY G + KVF R+ +D VSW + I+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG---NLDLGIKLHQLAMRTGLISYI 434
++A+E ++ M+ E T+ SV AC+ LG L LG +LH ++R G
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
N L+ MY+K +D + +F D++++SW ++I ++R EAL FFR M+L
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKP 552
++ + VT+ S+L AC+ + L GKEIHA+ LR + + F+ +AL+DMY C +++
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 553 AWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F+ R + WN +++GYA G A F +MI G
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 395
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 246/467 (52%), Gaps = 15/467 (3%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + NA + M+ K G +A Y+F + D D+ SWN ++ G+ AL+ RM
Sbjct: 36 VCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRM-K 91
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV D +T+ L C G + G ++ V++ G E+D+ V N+ ITMY + G
Sbjct: 92 SAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFR 151
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLF-IMMREVLVDPDFMTLSSVISA 307
AR VFD MP +D ISWN+++SG + G + + +++F MMRE V+ D ++ +SVI+
Sbjct: 152 GARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREG-VELDHVSFTSVITT 210
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D KL R++HG IK G+ + V N L+ Y G E + VF +M ++VVSW
Sbjct: 211 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSW 270
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TTMIS D AV + M +G P+E+T +L+A C + G+K+H L ++
Sbjct: 271 TTMISSNR-----DDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIK 325
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
TG +S + N+ I MY+K + ++ A + F I + +ISW ++I G N S EAL
Sbjct: 326 TGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKM 385
Query: 488 FRKMMLNLKPNSVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F PN T S+L+A A ++ G+ HAH L++G+ + +ALLDMY
Sbjct: 386 FLSATAETMPNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYA 445
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ G + + FN ++R+ W +++ Y+ G F +MI
Sbjct: 446 KRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMI 492
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 255/484 (52%), Gaps = 20/484 (4%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL ++ M+ + D + C G+ GL L S V K+ + +GN+F++
Sbjct: 83 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFIT 142
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDV 197
M+ + G A VF +M +D+ SWN L+ G ++ G F EA+ +++ M GV+ D
Sbjct: 143 MYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMR-EGVELDH 201
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F V+ TC DLK +++H I+ GYE+ ++V N L++ Y KCG L + VF
Sbjct: 202 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQ 261
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R+ +SW MIS ++ + +F+ MR V P+ +T +++A + K G
Sbjct: 262 MSERNVVSWTTMISSNRDD-----AVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEG 316
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++HG IK GF + SV N I MY F E+ +K F + ++++SW MIS + +
Sbjct: 317 LKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQN 376
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYII 435
+A++ + AE +MP+E T SVL+A A ++ + G + H ++ GL S +
Sbjct: 377 GFSHEALKMFLSATAE-TMPNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPV 435
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+++ L+DMY+K I+++ +VF+++ +N WTSII + + F +M+ N
Sbjct: 436 VSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKEN 495
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGR 549
+ P+ VT +S+L+AC R G + G EI L + + P + ++DM R GR
Sbjct: 496 VAPDLVTFLSVLTACNRKGMVDKGHEI----LNMMIEDYNLEPSHEHYSCMVDMLGRAGR 551
Query: 550 MKPA 553
+K A
Sbjct: 552 LKEA 555
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 198/388 (51%), Gaps = 17/388 (4%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T L+ C G DLKRG ++H G+ + V V NA++ MY K G A +F
Sbjct: 2 DEVTLCLALKACRG--DLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE- 314
+ + D +SWN ++SG+ +N L + M+ V D T S+ +S VG E
Sbjct: 60 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSF--CVGSEG 114
Query: 315 -KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS- 372
+LG ++ V+K G D+ V N I MY G+ +VF M KD++SW +++S
Sbjct: 115 FRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSG 174
Query: 373 -CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
EG+ +AV ++ M EG D ++ SV++ C +L L ++H L ++ G
Sbjct: 175 LSQEGT-FGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 233
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + + N L+ YSKC ++ VF+Q+ ++NV+SWT++I +NR IF
Sbjct: 234 SLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMI----SSNRDDAVSIFLNMR 289
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + PN VT V +L+A + G +IH ++ G + + N+ + MY + ++
Sbjct: 290 LDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALE 349
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERG 578
A F+ R++ +WN +++G+A+ G
Sbjct: 350 DAKKAFDDITFREIISWNAMISGFAQNG 377
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 179/390 (45%), Gaps = 53/390 (13%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E V L+ + EGL +H + KT +GN+F++M+ KF L A F
Sbjct: 296 NEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAF 355
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ R++ SWN +I G+A+ GF EAL ++ + P+ YTF VL D+
Sbjct: 356 DDITFREIISWNAMISGFAQNGFSHEALKMF--LSATAETMPNEYTFGSVLNAIAFAEDI 413
Query: 214 --KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
K G+ H H+++ G + V +AL+ MY K G++ + VF+ M +R++ W ++IS
Sbjct: 414 SVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIIS 473
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y +G++ + LF M + V PD +T SV++A G G E
Sbjct: 474 AYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHE------------ 521
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ N +I+ Y N E + +S M D++ + E ++M
Sbjct: 522 ---ILNMMIEDY----NLEPSHEHYSCM--VDMLGRAGRLK------------EAEELMS 560
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-----TGLISYIIIANTLIDMYSK 446
P E + S+L +C GN+ +G K+ +LAM +G SY+ + N +Y++
Sbjct: 561 EVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG--SYVQMYN----IYAE 614
Query: 447 CKCIDKALEVFHQIPDKNV-----ISWTSI 471
+ DKA E+ + KNV SW +
Sbjct: 615 KEQWDKAAEIRKAMRKKNVSKEAGFSWIDV 644
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
DE+T+ L AC G+L G ++H + G S++ ++N ++ MY K D AL +F
Sbjct: 2 DEVTLCLALKACR--GDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIF 59
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMC 517
+ D +V+SW +I+ G N + ++ R + ++ T + LS C
Sbjct: 60 ENLVDPDVVSWNTILSGFDDNQIALNFVV--RMKSAGVVFDAFTYSTALSFCVGSEGFRL 117
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
G ++ + ++ G+ D + N+ + MY R G + A F+ +D+ +WN LL+G ++
Sbjct: 118 GLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQ 177
Query: 577 RGQ-GALAEEFFRKMI 591
G G A FR M+
Sbjct: 178 EGTFGFEAVLIFRDMM 193
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 233/459 (50%), Gaps = 3/459 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
N+ L + G+L A VF KM RD+ SW +I GY A DEA+ L+ M V
Sbjct: 38 NSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPA 97
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD VL+ CG ++ G+ +H + ++ + V V ++L+ MY + G + ++
Sbjct: 98 VSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSC 157
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MP R+ ++W A+I+G G Y +GL F M D T + + A +
Sbjct: 158 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLR 217
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G+++H +VI GF V V N L MY G +G +F M +DVVSWT++I
Sbjct: 218 QVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIV 277
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +KAVET+ M P+E T A++ SACA L L G +LH GL
Sbjct: 278 AYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLND 337
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N+++ MYS C +D A +F + +++ISW++II G EA +F M
Sbjct: 338 SLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMR 397
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ KP L S+LS + L G+++HA A G+ + + + L++MY +CG +K
Sbjct: 398 QSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIK 457
Query: 552 PAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRK 589
A F +R D+ + ++ GYAE G+ A + F K
Sbjct: 458 EASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 496
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 264/520 (50%), Gaps = 20/520 (3%)
Query: 77 EQALKYLDSMQELNICVDED-ALVNLV-RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
++A+ +M+ ++ V D ++V++V + C G LH+ KT SV +G+
Sbjct: 82 DEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGS 141
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ L M+ + G + + VF +M R+ +W +I G AG + E L+ Y
Sbjct: 142 SLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLT-YFSEMSSSEEL 200
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D +TF L+ C G+ +K GK++H HVI G++A V V N+L TMY +CG++ +
Sbjct: 201 SDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCL 260
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ M +RD +SW ++I Y G K + FI MR V P+ T +++ SA +
Sbjct: 261 FENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRL 320
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++H V +G +D +SV N ++KMY + G + +F M +D++SW+T+I Y
Sbjct: 321 VWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGY 380
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++A + + M G P + +AS+LS + L+ G ++H LA GL
Sbjct: 381 SQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNS 440
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK-MML 493
+ +TLI+MYSKC I +A ++F + +++S T++I G + +S EA+ F K + +
Sbjct: 441 TVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 500
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVRCG 548
P+SVT +S+L+AC G L G + +R G ++D+ R G
Sbjct: 501 GFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYG----CMVDLLCRAG 556
Query: 549 RMKPAWNQFN--SNERDVSAWNILL-----TGYAERGQGA 581
R+ A + S ++D W LL G ERG+ A
Sbjct: 557 RLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRA 596
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 190/385 (49%), Gaps = 11/385 (2%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L++ E + V+ F N+ + + G+L AR VFD MP RD +SW A+I G
Sbjct: 22 LEKPVEKTIQVVTFD-------TNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKG 74
Query: 273 YFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
Y + ++LF MR V V PD +S V+ A + G +H Y +K
Sbjct: 75 YVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLL 134
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
V V + L+ MY G E+ +VFS M ++ V+WT +I+ + + + + M
Sbjct: 135 SSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 194
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ + D T A L ACA L + G ++H + G + + +AN+L MY++C +
Sbjct: 195 SSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEM 254
Query: 451 DKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSAC 509
L +F + +++V+SWTS+I+ R+ + F + + PN T ++ SAC
Sbjct: 255 RDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSAC 314
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWN 568
A + L+ G+++H + +G+ + N+++ MY CG++ A F RD+ +W+
Sbjct: 315 ASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWS 374
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
++ GY++ G G A ++F M S
Sbjct: 375 TIIGGYSQAGFGEEAFKYFSWMRQS 399
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 11/409 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ L Y M D ++ C R G +H+ V +V +
Sbjct: 182 GRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVA 241
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +M+ + G++ +F M +RD+ SW LI Y + G ++A+ + +M V
Sbjct: 242 NSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKM-RNSQV 300
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF + C + L G+++H +V G + V N+++ MY CG L A +
Sbjct: 301 PPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASV 360
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F GM RD ISW+ +I GY + G + F MR+ P L+S++S S +
Sbjct: 361 LFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAV 420
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ GR+VH G + +V + LI MY GN +E K+F + D+VS T MI+
Sbjct: 421 LEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMING 480
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA-----MRT 428
Y +A++ ++ G PD +T SVL+AC G LDLG L MR
Sbjct: 481 YAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRP 540
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLR 476
Y ++D+ + + +A ++ ++ K+ + WT++++ +
Sbjct: 541 AKEHY----GCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACK 585
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA--EG 394
N ++ ++ GN +VF +M +D+VSWT +I Y + D+A+ + M
Sbjct: 38 NSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPA 97
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD ++ VL AC N+ G LH A++T L+S + + ++L+DMY + I+K+
Sbjct: 98 VSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSC 157
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG 513
VF ++P +N ++WT+II GL R E L +F +M + + ++ T L ACA +
Sbjct: 158 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLR 217
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLT 572
+ GK+IH H + G ++ N+L MY CG M+ F N +ERDV +W L+
Sbjct: 218 QVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIV 277
Query: 573 GYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
Y G A E F KM +S+ N + +F C
Sbjct: 278 AYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSAC 314
>gi|255536747|ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549339|gb|EEF50827.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 269/526 (51%), Gaps = 33/526 (6%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
NL+ C + G +H+ V K ++ N ++++ K +A + + +
Sbjct: 111 NLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKMVDESTEP 170
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRM------------------------FWVG---- 191
DL SW+ LI GY++ GF EA+S + M W+G
Sbjct: 171 DLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDMWLGRQDM 230
Query: 192 ---GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G++P+ ++ C++ C G+ D +G+++H ++I+ Y+ D+ NAL+ MY K G L
Sbjct: 231 ILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGTL 290
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF+ + K D +SWNA+I+G + L LF M + P+ T+SS + A
Sbjct: 291 EEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFTISSALKAC 350
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G ++LGR++H ++KM D + LI MY + +F+ M +D++ W
Sbjct: 351 AGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWN 410
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
I+ + + +AV + M EG ++IT+++VL + A L + ++H L++++
Sbjct: 411 AAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKS 470
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G +AN+LID Y KC I A +F + P +++++TS+I + + EAL +
Sbjct: 471 GFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLY 530
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M ++P+S S+L+ACA + A GK++H H L+ G D F N+L++MY +C
Sbjct: 531 LEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKC 590
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G + A F+ ER + +W+ ++ G+A+ G G A + F +M++
Sbjct: 591 GSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLE 636
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 224/417 (53%), Gaps = 2/417 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E +L ++ C +G +H + K L + NA + M+ K G L A VF
Sbjct: 238 NEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGTLEEAIRVF 297
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++ D+ SWN +I G A + AL L+ +M G+ P+++T L+ C G+
Sbjct: 298 EEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNR-SGMCPNMFTISSALKACAGMGLK 356
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++H +++ +D + LI MY KC + ARL+F+ MP+RD I WNA I+G+
Sbjct: 357 ELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWNAAITGH 416
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NGE ++ + LF M + V + +TLS+V+ + + + + ++H +K GF D
Sbjct: 417 SQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDN 476
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N LI Y G ++ ++F D+V++T+MI+ Y ++A++ Y M+
Sbjct: 477 YVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDR 536
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
PD +S+L+ACA L + G ++H ++ G IS I N+L++MY+KC ID A
Sbjct: 537 KIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDA 596
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
F +IP++ ++SW+++I G + EAL F +M+ + + PN + + + SAC
Sbjct: 597 DRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLEDGIPPNHMYVYDVPSAC 653
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 215/437 (49%), Gaps = 40/437 (9%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P ++ +L C GKE+H VI+ G D + N LI +Y KC AR +
Sbjct: 104 PISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKM 163
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD------------------- 295
D + D +SW+A+ISGY +NG + + F M + V
Sbjct: 164 VDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDM 223
Query: 296 -------------PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
P+ +LS +I+A + D GR++HGY+IK+ + D+ N L+ M
Sbjct: 224 WLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDM 283
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGSMPDE 399
Y G EE +VF + D+VSW +I+ G L + A+E + M G P+
Sbjct: 284 YAKVGTLEEAIRVFEEIAKPDIVSWNAIIA---GCALREYHCWALELFGKMNRSGMCPNM 340
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
TI+S L ACA +G +LG +LH ++ + S +A LIDMYSKC + A +F+
Sbjct: 341 FTISSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNL 400
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+P++++I W + I G N EA+ F M + N +TL ++L + A +
Sbjct: 401 MPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHIC 460
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAER 577
+IHA +L+ G FD ++ N+L+D Y +CGR+K A F + D+ A+ ++T Y++
Sbjct: 461 SQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQD 520
Query: 578 GQGALAEEFFRKMIDSK 594
GQG A + + +M D K
Sbjct: 521 GQGEEALKLYLEMQDRK 537
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 164/331 (49%), Gaps = 1/331 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL+ M +C + + + ++ C + G LHS + K L +
Sbjct: 324 ALELFGKMNRSGMCPNMFTISSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVGLID 383
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K + A +F M +RDL WN I G+++ G EA+SL+ M GV +
Sbjct: 384 MYSKCDLMTDARLLFNLMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMH-KEGVGFNQI 442
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T VL++ + ++H ++ G++ D V N+LI Y KCG + A +F
Sbjct: 443 TLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQES 502
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P D +++ +MI+ Y ++G+ + L L++ M++ + PD SS+++A + + G+
Sbjct: 503 PFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGK 562
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VH +V+K GF D+ N L+ MY G+ ++ ++ FS + + +VSW+ MI +
Sbjct: 563 QVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHG 622
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+A++ + M +G P+ + + V SAC
Sbjct: 623 HGKEALQLFNRMLEDGIPPNHMYVYDVPSAC 653
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 34/230 (14%)
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
S P I+ +++L C G ++H ++ GL I N LI++YSKC+ A
Sbjct: 102 STPISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYAR 161
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
++ + + +++SW+++I G N EA+ F +M +L +K N T S+L AC
Sbjct: 162 KMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTT 221
Query: 514 -------------------ALMC-------------GKEIHAHALRIGVAFDGFLPNALL 541
+L C G++IH + +++ D F NAL+
Sbjct: 222 DMWLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALV 281
Query: 542 DMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
DMY + G ++ A F + D+ +WN ++ G A R A E F KM
Sbjct: 282 DMYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKM 331
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+ALK MQ+ I D +L+ C Y++G +H V K +
Sbjct: 520 DGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFA 579
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ ++M+ K G + A F ++ +R + SW+ +IGG+A+ G EAL L+ RM G
Sbjct: 580 GNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLE-DG 638
Query: 193 VKPD---VYTFPCVLRTCGGVPDLKRGKE 218
+ P+ VY P + L++ +E
Sbjct: 639 IPPNHMYVYDVPSACNPAILIAHLEKTQE 667
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 230/399 (57%), Gaps = 16/399 (4%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+P ++L +LEQ +K L++ E I +D + +L+ C + G+ +H ++
Sbjct: 63 HPKTKLE------ALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLI 116
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL--FSWNVLIGGYAKAGFFDE 179
++ H +V + + L ++ G L A +F +M RD F WN LI GYA+ G +DE
Sbjct: 117 PTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDE 176
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A++LY +M GV+ D++TFP VL+ C G+ ++ G+EVH H IR G+ AD ++NAL+
Sbjct: 177 AIALYFQMV-EEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALV 235
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCGD+V+AR VFD MP RD +SWN+M++ Y +G ++ + +F M +PD +
Sbjct: 236 DMYSKCGDIVKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSV 295
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
++S+V++ +G LG ++HG+VI G ++S+ N LI MY + G E+ VF+ M
Sbjct: 296 SISTVLTGVSSLG---LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLM 352
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DVVSW ++IS + +A+ ++ ME G PD+IT S+LSACA LG L G
Sbjct: 353 PERDVVSWNSIISAH---CKRREALAFFEQMEGAGVQPDKITFVSILSACAYLGLLKDGE 409
Query: 420 KLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVF 457
+L L I I+ ++++Y + I KA +
Sbjct: 410 RLFALMCGKYKIKPIMEHYGCMVNLYGRAGLIKKAYSII 448
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 209/409 (51%), Gaps = 30/409 (7%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+K D + +L TC + G VH + +V + + L+ +Y CG L A
Sbjct: 85 GIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDA 144
Query: 252 RLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+FD M KRD WN++ISGY + G Y + + L+ M E V+ D T V+
Sbjct: 145 HDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCA 204
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G ++G EVH + I+ GF+ D + N L+ MY G+ + KVF +M +D VSW +
Sbjct: 205 GIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWNS 264
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y L +A+ ++ M EG PD ++I++VL+ + LG LG+++H + G
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG---LGVQIHGWVISQG 321
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ IAN+LI MYS ++KA VF+ +P+++V+SW SII + + EAL FF
Sbjct: 322 HEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISA---HCKRREALAFFE 378
Query: 490 KMM-LNLKPNSVTLVSILSACARIG---------ALMCGKEIHAHALRIGVAFDGFLPNA 539
+M ++P+ +T VSILSACA +G ALMCGK +I + +
Sbjct: 379 QMEGAGVQPDKITFVSILSACAYLGLLKDGERLFALMCGK------YKIKPIMEHY--GC 430
Query: 540 LLDMYVRCGRMKPAW----NQFNSNERDVSAWNILLTGYAERGQGALAE 584
++++Y R G +K A+ + + + W LL G + E
Sbjct: 431 MVNLYGRAGLIKKAYSIIVDGIGTEAAGPTLWGALLYACFMHGDATIGE 479
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 153/278 (55%), Gaps = 10/278 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS--WTTMISCY 374
G VH + +V + + L+++Y S G ++ +F +M +D + W ++IS Y
Sbjct: 109 GIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGY 168
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
D+A+ Y M EG D T VL CA +G++ +G ++H+ A+R G +
Sbjct: 169 AQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADG 228
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
I N L+DMYSKC I KA +VF ++P ++ +SW S++ + +A+ FR+M+L
Sbjct: 229 FILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLE 288
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+P+SV++ ++L+ + +G G +IH + G ++ + N+L+ MY GR++ A
Sbjct: 289 GCEPDSVSISTVLTGVSSLG---LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKA 345
Query: 554 WNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
FN ERDV +WN +++ + +R + ALA FF +M
Sbjct: 346 RWVFNLMPERDVVSWNSIISAHCKRRE-ALA--FFEQM 380
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++ V+ + +G D AS+L C + GI++H+L + L + I++ L
Sbjct: 72 EQVVKDLEASVEKGIKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKL 131
Query: 441 IDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKP 497
+ +Y+ C +D A ++F Q+ D + W S+I G EA+ ++F+ + ++
Sbjct: 132 LRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEA 191
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T +L CA IG++ G+E+H HA+R G A DGF+ NAL+DMY +CG + A F
Sbjct: 192 DLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVF 251
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ RD +WN +LT Y G A FR+M+
Sbjct: 252 DKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQML 286
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+K + S+L C R A++ G +H + + + + LL +Y CG + A
Sbjct: 86 IKIDPEIYASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAH 145
Query: 555 NQFNS-NERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+ F+ +RD SA WN L++GYA+ G A + +M++
Sbjct: 146 DLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVE 186
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 254/512 (49%), Gaps = 14/512 (2%)
Query: 77 EQALKYLDSMQ--ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
E+AL +M+ L + D L ++ C G LH+ KT SV +G+
Sbjct: 76 EEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGS 135
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L M+++ G + + VF +M R+ +W I G AG E L + +M +
Sbjct: 136 ALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLS 195
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D + F L+ C + +K G+E+H HVI G+ A + V N+L TMY +CG++ +
Sbjct: 196 SDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRL 255
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ M +RD + W ++I+ Y G+ K + F++MR V P+ T +S +A +
Sbjct: 256 FESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRL 315
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++HG V +G D +SV N ++KMY + + +F M +D++SW+T+I Y
Sbjct: 316 VWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGY 375
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++ + + M G P + +AS+LS + L+ G ++H LA+ GL
Sbjct: 376 SQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNP 435
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK-MML 493
I + LI+MYSKC I +A +VF + +++S T++I G + + EA+ F K + L
Sbjct: 436 TIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKL 495
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVRCG 548
+ +P+ VT +S+L+AC+ G L G + + +R G ++D+ R G
Sbjct: 496 SFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYG----CMVDLLCRAG 551
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERG 578
R+ A N ++D W LL E+G
Sbjct: 552 RLNDAEKMINEMPWKKDDVVWTTLLRACKEKG 583
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 231/457 (50%), Gaps = 4/457 (0%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKP 195
L + G L A VF KM RD+ SW ++ GY A +EAL L+ M GV
Sbjct: 35 LQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSG 94
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D Y L+ CG ++ G+ +H + + + V V +AL+ MY++ G + ++ VF
Sbjct: 95 DTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVF 154
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASELVGDE 314
MP R+ ++W A I+G G + +GL F M R + D + + A +
Sbjct: 155 AEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQV 214
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K GRE+H +VI GF+ + V N L MY G ++G ++F M +DVV WT++I+ Y
Sbjct: 215 KYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAY 274
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+KAV T+ +M P+E T AS +ACA L L G +LH GL +
Sbjct: 275 IRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSL 334
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
++N+++ MYS C +D A +F + +++ISW++II G E +F M
Sbjct: 335 SVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQA 394
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+P L S+LS + L G+++HA AL +G+ + + +AL++MY +CG + A
Sbjct: 395 GPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEA 454
Query: 554 WNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRK 589
F +R D+ + ++ GYAE G+ A + F K
Sbjct: 455 SKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEK 491
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE--GSMPDEITIAS 404
G +VF +M +D+ SWT ++ Y + P++A+ + M + G D ++
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L AC N+ G LH A +T L+S + + + L+DMY + IDK+ VF ++P +N
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIH 522
++WT+ I GL +E L +F +M L ++ L ACA + + G+EIH
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
H + G A ++ N+L MY CG M+ F S +ERDV W L+T Y GQ
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEE 281
Query: 582 LAEEFFRKMIDSK--GNWRKLMGLFRKC 607
A F M +S+ N + F C
Sbjct: 282 KAVNTFLLMRNSQVSPNEQTFASTFAAC 309
>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
Length = 883
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 244/484 (50%), Gaps = 11/484 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C +G +H+ + + LG+ L M+ K G + A VF + R
Sbjct: 51 LLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRS 110
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
LFSWN +I +AK +A+ +++ M G+KPD T VL C + DL+ G+ +H
Sbjct: 111 LFSWNFIIAAFAKNRHGRKAIEMFRSMD-SAGIKPDSATLSSVLGACSSLRDLEEGRRIH 169
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ +++ + V L+ MY +CG L AR VFD + +D I WN+MI+ Y + G
Sbjct: 170 GRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSA 229
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L M V T + ++ A + + G+++H + G S + V N LI
Sbjct: 230 QARQLCEEMEGFGVKASDTTFAGILGACSSLEE---GKKIHSRALARGLSSSIIVQNALI 286
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY + +VFS++ + DVVSWT +I Y +A+E Y+ ME EG PD++
Sbjct: 287 SMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKV 346
Query: 401 TIASVLSACACLGNLDLGIKLHQ--LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T SVLSAC+ +L+LG LH LA + G +++A LI+MY KC +D + E+F
Sbjct: 347 TFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQ 405
Query: 459 QIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
D K V+ W ++I S A+ + M L P+ TL SILSACA + L
Sbjct: 406 SCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLE 465
Query: 517 CGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G+++H + + + + NAL+ MY CG ++ A F RDV +W IL++ Y
Sbjct: 466 KGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAY 525
Query: 575 AERG 578
+ G
Sbjct: 526 VQGG 529
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 270/535 (50%), Gaps = 13/535 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G QA + + M+ + + ++ C +EG +HS
Sbjct: 216 NSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACS---SLEEGKKIHSRALA 272
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
S+ + NA +SM+ K +L A VF K+ D+ SW LI Y + G EAL L
Sbjct: 273 RGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALEL 332
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITM 241
Y++M G++PD TF VL C DL+ G+ +H ++ + G+ +D +V ALI M
Sbjct: 333 YKQMEG-EGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGF-SDGVLVAALINM 390
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
YVKCG L + +F + + WNAMI+ Y + G + L+ MM++ +DPD T
Sbjct: 391 YVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDEST 450
Query: 301 LSSVISASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
LSS++SA + D + G +VH +I S + V N LI MY S G E + VF RM
Sbjct: 451 LSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 510
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+++DVVSWT +IS Y +A+ Y+ M EG P E+T+ +V++AC+ + +L GI
Sbjct: 511 KNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGI 570
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRL 477
+H L + + + LI MY++C+ +D A +VF Q+ + + W +++
Sbjct: 571 VIHALT-DSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQ 629
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
E + + +M +K N T L+AC+ +GA+ G IH + D L
Sbjct: 630 LGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSL 689
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
AL+ MY +C R+ A++ F + DV AWN ++ YA+ G A E + KM+
Sbjct: 690 KTALVHMYAKCNRVDAAFHVFEQLQPDVVAWNAMIAAYAQNGYAWHALELYSKML 744
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 214/396 (54%), Gaps = 7/396 (1%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T+ +L+ CG L +G+ +H H++ G +D + + L+ MY KCG + A VF +
Sbjct: 47 TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P+R SWN +I+ + +N K + +F M + PD TLSSV+ A + D + GR
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGR 166
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+HG + F + V L+KMY G E +VF R+E+KDV+ W +MI+ Y
Sbjct: 167 RIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGG 226
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+A + + ME G + T A +L AC+ +L+ G K+H A+ GL S II+ N
Sbjct: 227 HSAQARQLCEEMEGFGVKASDTTFAGILGACS---SLEEGKKIHSRALARGLSSSIIVQN 283
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LI MY KC +D A VF ++ +V+SWT++I+ + R+ EAL +++M ++P
Sbjct: 284 ALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEP 343
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQ 556
+ VT S+LSAC+ L G+ +HA L F DG L AL++MYV+CGR+ +
Sbjct: 344 DKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEI 403
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F S + + V WN ++T Y + G A + + M
Sbjct: 404 FQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMM 439
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 271/520 (52%), Gaps = 19/520 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ SM I D L +++ C R +EG +H +S + + +
Sbjct: 129 KAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLV 188
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ + G L A VF ++ ++D+ WN +I YA+ G +A L + M GVK
Sbjct: 189 KMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGF-GVKASD 247
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF +L C L+ GK++H + G + + V NALI+MY KC +L AR VF
Sbjct: 248 TTFAGILGAC---SSLEEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSK 304
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ D +SW A+I Y ++G + L L+ M ++PD +T +SV+SA D +LG
Sbjct: 305 VRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELG 364
Query: 318 REVHGYVI--KMGFSDDVSVCNPLIKMYLSFGNREEGEKVF-SRMESKDVVSWTTMISCY 374
+ +H ++ K GFSD V V LI MY+ G + ++F S ++K VV W MI+ Y
Sbjct: 365 QALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAY 423
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLISY 433
E AV+ Y MM+ G PDE T++S+LSACA L +L+ G ++H ++
Sbjct: 424 EQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQN 483
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++ N LI MY+ C I +A VF ++ +++V+SWT +I + AL +R+M++
Sbjct: 484 PVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLV 543
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMK 551
++P VT++++++AC+ + +L G I HAL + F D + AL+ MY RC R+
Sbjct: 544 EGVQPTEVTMLAVIAACSAMESLWEGIVI--HALTDSMFFTDTAVQAALISMYARCRRLD 601
Query: 552 PA---WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFR 588
A + Q E + WN +L Y++ G L EE R
Sbjct: 602 LACQVFRQVRHLESSANCWNAMLAAYSQLG---LPEEGIR 638
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 12/448 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
+G +AL+ M+ + D+ +++ C + G LH+ ++++
Sbjct: 323 HGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGV 382
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L A ++M+VK G L + +F D + + WN +I Y + G+ A+ LY M
Sbjct: 383 LVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYD-MMKQ 441
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI--RFGYEADVDVVNALITMYVKCGDL 248
G+ PD T +L C + DL++G++VHV +I R + V V+NALI+MY CG++
Sbjct: 442 RGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPV-VLNALISMYASCGEI 500
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+ VF M RD +SW +IS Y + G+ + L L+ M V P +T+ +VI+A
Sbjct: 501 REAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAAC 560
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-- 366
+ G +H M F+D +V LI MY + +VF ++ + +
Sbjct: 561 SAMESLWEGIVIHALTDSMFFTD-TAVQAALISMYARCRRLDLACQVFRQVRHLESSANC 619
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W M++ Y LP++ + Y M + G +E T A L+AC+ LG + G ++H+
Sbjct: 620 WNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGYRIHEQVS 679
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEAL 485
+ S + + L+ MY+KC +D A VF Q+ PD V++W ++I N ++ AL
Sbjct: 680 SSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQLQPD--VVAWNAMIAAYAQNGYAWHAL 737
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIG 513
+ KM+ KP T + + AC G
Sbjct: 738 ELYSKMLHGYKPLEPTFLCVFLACGHAG 765
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 239/436 (54%), Gaps = 6/436 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+W+++I Y GF ++AL LY +M GV+P +T+P VL+ C G+ ++ GK +H H
Sbjct: 70 AWDLMIRAYVSNGFAEKALDLYYKML-NSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSH 128
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
V + AD+ V AL+ Y KCG+L A VFD MPKRD ++WNAMISG+ +
Sbjct: 129 VKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDV 188
Query: 283 LMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF+ M R + P+ T+ + A G + G+ VHGY +MGFS+D+ V ++
Sbjct: 189 IGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM--EAEGSMPDE 399
+Y +VF K+ V+W+ MI Y + + +A E + M A+ +M
Sbjct: 249 VYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP 308
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ I +L CA G+L G +H A++ G I + + NT+I Y+K + A F +
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTE 368
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
I K+++S+ S+I G N R+ E+ F +M + ++P+ TL+ IL+AC+ + AL G
Sbjct: 369 IGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHG 428
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
H + + G A + + NAL+DMY +CG++ A F++ ++RD+ +WN +L G+
Sbjct: 429 SSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 578 GQGALAEEFFRKMIDS 593
G G A F M D+
Sbjct: 489 GLGKEALSLFNSMQDT 504
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 252/530 (47%), Gaps = 17/530 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + + +++ C R ++G +HS V + + +
Sbjct: 81 NGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYV 140
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + + K G+L A VF +M RD+ +WN +I G++ + + L+ M
Sbjct: 141 CTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDC 200
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P++ T + G L+ GK VH + R G+ D+ V ++ +Y K ++ AR
Sbjct: 201 LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYAR 260
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD K++ ++W+AMI GY EN + +F+ M LV+ D ++ V L+G
Sbjct: 261 RVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQM---LVNADMAMVTPVAIGLILMG 317
Query: 313 -----DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D GR VH Y IK GF D++V N +I Y +G+ + + F+ + KD+VS+
Sbjct: 318 CARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSY 377
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
++IS + +++ + M++ G PD T+ +L+AC+ L L G H +
Sbjct: 378 NSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVV 437
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G I N L+DMY+KC + A VF + ++++SW +++ G ++ EAL
Sbjct: 438 NGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR----IGVAFDGFLPNALLD 542
F M + P+ VTL++ILSAC+ G + GK++ R + D + N + D
Sbjct: 498 FNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHY--NCMTD 555
Query: 543 MYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ R G + A++ N E D+ LL+ L E +KM
Sbjct: 556 LLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKM 605
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 12/417 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRARLVFDGMP- 259
+L +C +L G+ +H H+++ + +VN L +Y C ++ AR VFD +P
Sbjct: 5 LLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPH 63
Query: 260 -KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+ + I+W+ MI Y NG K L L+ M V P T V+ A + + G+
Sbjct: 64 PRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGK 123
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE-GS 377
+H +V F+ D+ VC L+ Y G + KVF M +D+V+W MIS +
Sbjct: 124 LIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L D M ++ P+ TI + A G L G +H R G + +++
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++D+Y+K KCI A VF KN ++W+++I G N EA F +M++N
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADM 303
Query: 498 NSVTLVS---ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
VT V+ IL CAR G L G+ +H +A++ G D + N ++ Y + G + A+
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAF 363
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
QF +D+ ++N L++G E + + F +M S + + L+G+ C
Sbjct: 364 RQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACS 420
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 3/198 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N E++ + M+ I D L+ ++ C G H
Sbjct: 378 NSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVV 437
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + NA + M+ K G L A VF M RD+ SWN ++ G+ G EALSL
Sbjct: 438 NGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITM 241
+ M GV PD T +L C + GK++ + R F +D N + +
Sbjct: 498 FNSM-QDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDL 556
Query: 242 YVKCGDLVRARLVFDGMP 259
+ G L A + MP
Sbjct: 557 LARAGYLDEAYDFVNKMP 574
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 236/460 (51%), Gaps = 4/460 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +S + G+L A +F + + +W+ L+ GY K G E L + +M W G
Sbjct: 72 NIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQ 130
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP YT VLR C + L GK +H + I+ EA++ V L+ MY KC L+ A
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190
Query: 254 VFDGMPKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P R + + W AM++GY +NGE +K + F MR ++ + T S+++A +
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSIS 250
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR+VHG +I GF +V V + L+ MY G+ + ME DVV W +MI
Sbjct: 251 AYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIV 310
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
++A+ + M D+ T SVL + A NL +G +H L ++TG +
Sbjct: 311 GCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDA 370
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
++N L+DMY+K + AL+VF++I DK+VISWTS++ G N +AL F M
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMR 430
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + + + SACA + + G+++HA+ ++ N+L+ MY +CG ++
Sbjct: 431 TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A +S E R+V +W ++ GYA+ G + +F M
Sbjct: 491 DAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESM 530
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 223/455 (49%), Gaps = 4/455 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S ++ C NG + L+ M + L +++R C G +H K
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
++ + + M+ K L A Y+F + DR + W ++ GYA+ G +A+
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G++ + +TFP +L C + G++VH +I G+ +V V +AL+ MY
Sbjct: 223 CFKEMR-NQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMY 281
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL AR++ D M D + WN+MI G +G + L+LF M + D T
Sbjct: 282 AKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYP 341
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV+ + + K+G VH IK GF +V N L+ MY GN VF+++ K
Sbjct: 342 SVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
DV+SWT++++ Y + +KA++ + M D+ +A V SACA L ++ G ++H
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++ S + N+LI MY+KC C++ A+ V + +NVISWT+II+G N
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVE 521
Query: 483 EALIFFRKM--MLNLKPNSVTLVSILSACARIGAL 515
+F M + +KP S ++ R G +
Sbjct: 522 TGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKI 556
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 185/397 (46%), Gaps = 35/397 (8%)
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI----------------- 270
Y +++D N L++ K G + AR +FD MP RD+ +WN MI
Sbjct: 34 YSSNLDS-NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFN 92
Query: 271 --------------SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
SGY +NG ++GL F M P TL SV+ A +
Sbjct: 93 ETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHT 152
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV-FSRMESKDVVSWTTMISCYE 375
G+ +H Y IK+ ++ V L+ MY E E + FS + K+ V WT M++ Y
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ KA++ ++ M +G + T S+L+AC + G ++H + +G +
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVY 272
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ + L+DMY+KC + A + + +V+ W S+I+G + EAL+ F KM +
Sbjct: 273 VQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRD 332
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ + T S+L + A L G+ +H+ ++ G + NAL+DMY + G + A
Sbjct: 333 IRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ FN ++DV +W L+TGY G A + F M
Sbjct: 393 DVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDM 429
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 164/384 (42%), Gaps = 51/384 (13%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G +E+AL M +I +D+ ++++ + G +HS+ K
Sbjct: 306 NSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIK 365
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + NA + M+ K G+L A VF K+ D+D+ SW L+ GY GF ++AL L
Sbjct: 366 TGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQL 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M V D + CV C + ++ G++VH + I+ + + N+LITMY
Sbjct: 426 FCDMR-TARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---------- 293
KCG L A V D M R+ ISW A+I GY +NG G F M +V
Sbjct: 485 KCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYA 544
Query: 294 -----------------------VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
V+PD S++SA + G+ +LG +IK+ S
Sbjct: 545 CMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPS 604
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-----SWTTMISCYEGSVLPDK--- 382
+ + L M+ G E+ + M++ + SW M S + D+
Sbjct: 605 NSLPYV-LLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHP 663
Query: 383 -AVETYQ-------MMEAEGSMPD 398
A E Y +++ G +PD
Sbjct: 664 LAAEIYSKIDEMMILIKEAGHVPD 687
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 256/495 (51%), Gaps = 9/495 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H + N +S VK GD+ A +F M DR + +W +L+G YA+ FDEA
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEA 129
Query: 181 LSLYQRMFWVGGVK-PDVYTFPCVLRTCG-GVPDLKRGKEVHVHVIRFGYEAD--VDVVN 236
L+++M PD TF +L C VP G +VH ++ G++ + + V N
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSN 188
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ Y + L A ++F+ +P++D +++N +I+GY ++G Y + + LF+ MR+ P
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP 248
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T S V+ A + D LG+++H + GFS D SV N ++ Y E +F
Sbjct: 249 SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF 308
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M D VS+ +IS Y + + ++ ++ M+ G A++LS A L +L
Sbjct: 309 DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+G +LH A+ S + + N+L+DMY+KC+ ++A +F +P + +SWT++I G
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
L F KM NL+ + T ++L A A +L+ GK++HA +R G + F
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS- 593
+ L+DMY +CG +K A F +R+ +WN L++ +A+ G G A F KMI+S
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 594 -KGNWRKLMGLFRKC 607
+ + ++G+ C
Sbjct: 549 LQPDSVSILGVLTAC 563
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 229/463 (49%), Gaps = 5/463 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ N L + + L A +F ++ ++D ++N LI GY K G + E++ L+ +M
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ-S 244
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P +TF VL+ G+ D G+++H + G+ D V N ++ Y K ++
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R++FD MP+ D +S+N +IS Y + +Y L F M+ + D ++++S + +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++GR++H + + V N L+ MY EE E +F + + VSWT +I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y L ++ + M D+ T A+VL A A +L LG +LH +R+G +
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+DMY+KC I A++VF ++PD+N +SW ++I N A+ F KM
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + L+P+SV+++ +L+AC+ G + G E A + G+ +LD+ R GR
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A + E D W+ +L +LAE K+
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 187/367 (50%), Gaps = 3/367 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH++ T +GN L + K + +F +M + D S+NV+I Y++
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
A ++ +L ++ M +G + + + F +L + L+ G+++H + ++ +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KC A L+F +P+R +SW A+ISGY + G + GL LF MR
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D T ++V+ AS LG+++H ++I+ G ++V + L+ MY G+ ++
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M ++ VSW +IS + + + A+ + M G PD ++I VL+AC+ G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 414 NLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G + Q ++ G+ ++D+ + +A ++ ++P + + I W+S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 472 ILGLRLN 478
+ R++
Sbjct: 628 LNACRIH 634
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 39/412 (9%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ V +I+ G++ D N ++ ++ G + AR V+D MP ++ +S N MISG+ +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 277 GEYMKGLMLFIMMREVLVD---------------------------------PDFMTLSS 303
G+ LF M + V PD +T ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 304 VISA-SELVGDEKLGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRME 360
++ ++ V +G +VH + +K+GF + ++V N L+K Y + +F +
Sbjct: 153 LLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD V++ T+I+ YE L +++ + M G P + T + VL A L + LG +
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH L++ TG + N ++D YSK + + +F ++P+ + +S+ +I ++
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+L FFR+M + + ++LS A + +L G+++H AL + N+
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L+DMY +C + A F S +R +W L++GY ++G + F KM
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ +GN+ + M+ K A +F + R SW LI GY + G L L+ +M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++ D TF VL+ L GK++H +IR G +V + L+ MY KCG +
Sbjct: 446 -SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF+ MP R+ +SWNA+IS + +NG+ + F M E + PD +++ V++A
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 310 LVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSW 367
G + G E + + G + ++ + G E EK+ M D + W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 368 TTMISC---YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+++++ ++ L ++A E ME ++++++ +A
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
LK M+ N+ D+ +++ G LH+ + ++ + +V G+ + M
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ K G + A VF +M DR+ SWN LI +A G + A+ + +M G++PD +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVS 555
Query: 200 FPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VL C +++G E +G ++ + + G A + D M
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 259 P-KRDRISWNAMISG 272
P + D I W+++++
Sbjct: 616 PFEPDEIMWSSVLNA 630
>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 262/499 (52%), Gaps = 17/499 (3%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C + +G +H+ V++ + LGNA ++M+ K A VF M RD SW
Sbjct: 4 CVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSW 63
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV--PD--LKRGKEVH 220
N +I YA+ GF +EA+ ++ M V G+ PD YT L C G+ PD LK+G+E+H
Sbjct: 64 NTMIATYARNGFGEEAVEVFHEMALV-GIPPDKYTLISALDGCCGLSCPDRGLKKGREIH 122
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ G+ +DV + LI MY K G+++ AR +FDGM +R ++W MI+ Y +NG
Sbjct: 123 RRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGFGN 182
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + L+ +++ V PD + +SV+ A + + G+ +H +++ F D V N L+
Sbjct: 183 EAIELY---KQIDVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLL 239
Query: 341 KMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEGSVLPDKAVET-YQMMEAEGSMP 397
+Y G EE + VF M+ +DVVSW ++I + + P +A+ ++M EA G
Sbjct: 240 DLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQ 299
Query: 398 DEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D ++ S L AC+ +G+ L G LH L + + + + L+ MY +C + +A +
Sbjct: 300 DRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQ 359
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGA 514
VF +P KN ++WTS+I G N + EA+ F+KM + + + V+++ A +
Sbjct: 360 VFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVED 419
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE---RDVSAWNILL 571
+ +IH+ +G D + ++L+ M+ +CG ++ A F++ E R AWN ++
Sbjct: 420 VKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMI 479
Query: 572 TGYAERGQGALAEEFFRKM 590
Y+ RG E F+ M
Sbjct: 480 AAYSRRGDKEAVLELFQAM 498
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 211/398 (53%), Gaps = 14/398 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L C + L G++VH V R G+ +D+ + NALI MY KC AR VFDGM RD
Sbjct: 1 LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDS 60
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA----SELVGDEKLGRE 319
+SWN MI+ Y NG + + +F M V + PD TL S + S K GRE
Sbjct: 61 VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGRE 120
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H + +GF DV++ LIKMY FG E ++F M + ++W MI+ Y +
Sbjct: 121 IHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGF 180
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
++A+E Y+ ++ +PD++ ASVL AC+ NL+ G ++H + ++ NT
Sbjct: 181 GNEAIELYKQIDV---VPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNT 237
Query: 440 LIDMYSKCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
L+D+Y C C+++A VFH + + ++V+SW SII N++ EAL F +M P
Sbjct: 238 LLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGP 297
Query: 498 --NSVTLVSILSACARIGA--LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ V+ VS L AC+ +G+ L+ GK +H L + D ++ AL+ MY RCG + A
Sbjct: 298 RQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEA 357
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ ++ W ++ GY+ G A E F+KM
Sbjct: 358 KQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKM 395
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 243/515 (47%), Gaps = 13/515 (2%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
+++++ D+ +++ C +EG +H+ + + + + N L ++ G L
Sbjct: 189 KQIDVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLLDLYGMCGCL 248
Query: 147 GHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
A VF M + RD+ SWN +I + EAL L+ M G + D ++ L
Sbjct: 249 EEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSAL 308
Query: 205 RTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
C G L GK +H ++ DV V AL+TMY +CGD+V A+ VFD MP ++
Sbjct: 309 DACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKN 368
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W +MI GY NG + + +F M + D + +V+ AS V D K+ ++H
Sbjct: 369 AVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDVKMAAKIHS 428
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS--WTTMISCYEGSVLP 380
+ ++G+ D ++ + LI M+ G+ E +VF ME K S W MI+ Y
Sbjct: 429 RLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDK 488
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+ +E +Q M+A PD T +L+ + H + + TG+ + ++ L
Sbjct: 489 EAVLELFQAMQAASVRPDRATFLGLLAVGGSFSPSEASAVQHAI-LSTGMETDSLVGTAL 547
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
++ ++ + +A VF ++ ++V+SWTS+++ + S EA+ F++M L ++P+
Sbjct: 548 LNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDE 607
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQF 557
V +++L AC G G + A ++R + + ++D+ R GR+ A +
Sbjct: 608 VAFLAVLFACNHAGFFRRGWDYFA-SMRGDYDLEAGADHYCCVVDLLGRAGRLADAEDLI 666
Query: 558 NSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
S + D + W+ L+ G A R M
Sbjct: 667 VSMPFKPDEATWSALVGACNTHGDVERAARISRAM 701
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR+VH V + GF D+ + N LI MY + + VF M +D VSW TMI+ Y
Sbjct: 13 GRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSWNTMIATYAR 72
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK----LHQLAMRTGLIS 432
+ ++AVE + M G PD+ T+ S L C L D G+K +H+ G +S
Sbjct: 73 NGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGREIHRRIQSIGFMS 132
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + LI MY K + +A +F + + ++W +I N EA+ +++
Sbjct: 133 DVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGFGNEAIELYKQ-- 190
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+++ P+ V S+L AC+ L GK IHA + D + N LLD+Y CG ++
Sbjct: 191 IDVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLLDLYGMCGCLEE 250
Query: 553 AWNQFNSNE---RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
A F+S + RDV +WN ++ + Q A F +M ++ G
Sbjct: 251 AKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACG 296
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 263/517 (50%), Gaps = 44/517 (8%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGG 170
EG LH + + +GNA +SM+ K L A VF M R++ SWN +I
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
YA+ G EAL LY RM + G+ D TF VL C L +G+E+H V G ++
Sbjct: 85 YAQNGHSTEALVLYWRMN-LQGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDS 140
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ NAL+TMY + G + A+ +F + RD SWNA+I + ++G++ L +F M+
Sbjct: 141 FQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK 200
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ P+ T +VIS GR++H ++ GF D+ V LI MY G+
Sbjct: 201 -CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSH 259
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E +VF +M+ +D+VSW MI CY + +A+E YQ ++ EG + T S+L AC+
Sbjct: 260 EAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L G +H + GL S + +A L++MY+KC +++A +VF+ + +++ ++W++
Sbjct: 320 SVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWST 379
Query: 471 II---------------------LGLR-------------LNNRSFEALIFFRKMM--LN 494
+I LG R N + A+ FR+M
Sbjct: 380 LIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAG 439
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
LKP++VT +++L ACA +G L K +HA + + + N L++MY RCG ++ A
Sbjct: 440 LKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAE 499
Query: 555 NQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + E+ V +W ++ +++ G+ A A + F++M
Sbjct: 500 RLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 266/566 (46%), Gaps = 56/566 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +AL M + D V+++ C +G +H+ V
Sbjct: 79 NAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFY 135
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L NA ++M+ +FG +G A +F + RD SWN +I ++++G + AL +
Sbjct: 136 SGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRI 195
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M +KP+ T+ V+ L G+++H ++ G+++D+ V ALI MY
Sbjct: 196 FKEM--KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYG 253
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG AR VFD M KRD +SWN MI Y +NG++ + L L+ + T S
Sbjct: 254 KCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVS 313
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A V GR VH ++++ G +V+V L+ MY G+ EE KVF+ M+++D
Sbjct: 314 ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRD 373
Query: 364 VVSWTTMISCYEG---------------------SVLPDKAVETY--------------Q 388
V+W+T+I Y ++ + + TY +
Sbjct: 374 AVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFRE 433
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M A G PD +T +VL ACA LG L LH + L S +++ NTLI+MY++C
Sbjct: 434 MTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCG 493
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+++A +F +K V+SWT+++ R EAL F++M L +KP+ VT SIL
Sbjct: 494 SLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILF 553
Query: 508 ACARIGALMCG-------KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
C G+L G E+H G+A A++D+ R GR+ A S
Sbjct: 554 VCTHGGSLEQGWRYFTDMAELH------GLAPTADHFAAMVDLLGRSGRLFDAKELLESM 607
Query: 561 --ERDVSAWNILLTGYAERGQGALAE 584
E D AW LT G+ L E
Sbjct: 608 PFEPDPVAWMTFLTACRIHGKLELGE 633
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 219/408 (53%), Gaps = 11/408 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD TF VL +C D+ G+ +H + +E D V NALI+MY KC LV AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 254 VFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M R R +SWNAMI+ Y +NG + L+L+ M + D +T SV+ A +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GRE+H V G S+ N L+ MY FG+ + +++F ++++D SW +I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ S A+ ++ M+ + P+ T +V+S + L G K+H + G
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF-EALIFFRK 490
S +++A LI+MY KC +A EVF ++ ++++SW ++++G + N F EAL ++K
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW-NVMIGCYVQNGDFHEALELYQK 298
Query: 491 M-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ M K T VSIL AC+ + AL G+ +H+H L G+ + + AL++MY +CG
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
++ A FN+ RD AW+ L+ YA G G A + RK+ D G+
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARK-ARKVFDRLGS 405
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 263/517 (50%), Gaps = 44/517 (8%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGG 170
EG LH + + +GNA +SM+ K L A VF M R++ SWN +I
Sbjct: 25 EGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAA 84
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
YA+ G EAL LY RM + G+ D TF VL C L +G+E+H V G ++
Sbjct: 85 YAQNGHSTEALVLYWRMN-LQGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDS 140
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ NAL+TMY + G + A+ +F + RD SWNA+I + ++G++ L +F M+
Sbjct: 141 FQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK 200
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V P+ T +VIS GR++H ++ GF D+ V LI MY G+
Sbjct: 201 -CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSH 259
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E +VF +M+ +D+VSW MI CY + +A+E YQ ++ EG + T S+L AC+
Sbjct: 260 EAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L G +H + GL S + +A L++MY+KC +++A +VF+ + +++ ++W++
Sbjct: 320 SVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWST 379
Query: 471 II---------------------LGLR-------------LNNRSFEALIFFRKMM--LN 494
+I LG R N + A+ FR+M
Sbjct: 380 LIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAG 439
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
LKP++VT +++L ACA +G L K +HA + + + N L++MY RCG ++ A
Sbjct: 440 LKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAE 499
Query: 555 NQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + E+ V +W ++ +++ G+ A A + F++M
Sbjct: 500 RLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 264/566 (46%), Gaps = 56/566 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +AL M + D V+++ C +G +H+ V
Sbjct: 79 NAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFY 135
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L NA ++M+ +FG +G A +F + RD SWN +I ++++G + AL +
Sbjct: 136 SGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRI 195
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M VKP+ T+ V+ L G+++H ++ G++ D+ V ALI MY
Sbjct: 196 FKEM--KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYG 253
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG AR VFD M KRD +SWN MI Y NG++ + L L+ + T S
Sbjct: 254 KCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVS 313
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A V GR VH ++++ G +V+V L+ MY G+ EE KVF+ M+++D
Sbjct: 314 ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRD 373
Query: 364 VVSWTTMISCYEGSVLPDKA---------------------VETY--------------Q 388
V+W+T+I Y + A + TY +
Sbjct: 374 AVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFRE 433
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M A G PD +T +VL ACA LG L LH + L S +++ NTLI+MY++C
Sbjct: 434 MTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCG 493
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+++A +F +K V+SWT+++ R EAL F++M L +KP+ VT SIL
Sbjct: 494 SLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILF 553
Query: 508 ACARIGALMCG-------KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
C G+L G E+HA + D F A++D+ R GR+ A S
Sbjct: 554 VCTHGGSLEQGWRYFTDMAELHA----LAPTADHFA--AMVDLLGRSGRLFDAKELLESM 607
Query: 561 --ERDVSAWNILLTGYAERGQGALAE 584
E D AW LT G+ L E
Sbjct: 608 PFEPDPVAWMTFLTACRIHGKLELGE 633
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 215/407 (52%), Gaps = 9/407 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD TF VL +C D+ G+ +H + +E D V NALI+MY KC LV AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 254 VFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M R R +SWNAMI+ Y +NG + L+L+ M + D +T SV+ A +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GRE+H V G S+ N L+ MY FG+ + +++F ++++D SW +I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ S A+ ++ M+ + P+ T +V+S + L G K+H + G
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +++A LI+MY KC +A EVF ++ ++++SW +I LN EAL ++K+
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M K T VSIL AC+ + AL G+ +H+H L G+ + + AL++MY +CG +
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+ A FN+ RD AW+ L+ YA G G A + RK+ D G+
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARK-ARKVFDRLGS 405
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 268/523 (51%), Gaps = 21/523 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVV 121
NS + E G +AL M++ + + ++ + C Y + ++ H V
Sbjct: 23 NSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVK 82
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
S+ + L V+ + + M+VK LG A+ +F +M RD+ SWN +I G+A+ GF D +
Sbjct: 83 SRFQADLFVQ--TSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVV 140
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
SL+ M + G++ D T + + + DLK + +H I+ G + DV V N I
Sbjct: 141 SLFCEM-GIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAA 199
Query: 242 YVKCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
Y KCG+ A VFDG+ K + +SWN+MI+GY + K + F M D
Sbjct: 200 YAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD-- 257
Query: 300 TLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+ + S V E L G+ +H + I++G D+ V N LI MY G+ +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M K VSWT MI+ D+A+ + MEA G PD +TI S++S C G L+L
Sbjct: 318 NMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALEL 377
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G + A GL +++ N LID+Y+KC +D A E+F+ +P+K+++SWT++I G L
Sbjct: 378 GKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCAL 437
Query: 478 NNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFD 533
N EAL +FF+ + L LKPN +T +++L AC G L G E + +I D
Sbjct: 438 NGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLD 497
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG 573
+ + + D+ R GR+K A+ +F N + DV W++LL+
Sbjct: 498 HY--SCMADLLGRKGRLKEAF-EFIQNMPFKPDVGIWSVLLSA 537
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 230/450 (51%), Gaps = 7/450 (1%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN I G+ +AL L+++M G++P+ TFP V + C + +LK + VH HV
Sbjct: 22 WNSSITESVNQGYAHKALLLFRQMK-QNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHV 80
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
++ ++AD+ V +++ MYVKC L A +F MP RD SWN+MI G+ + G + +
Sbjct: 81 VKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVV 140
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF M + D +T+ + ++ + D K+ +H + IK+G DVSV N I Y
Sbjct: 141 SLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAY 200
Query: 344 LSFGNREEGEKVFSRMES--KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
G E VF ++ K VSW +MI+ Y KAV ++ M G D T
Sbjct: 201 AKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLST 260
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
I S+LS+C L G +H ++ G S I + NTLI MYSKC I A +F +
Sbjct: 261 ILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNML 320
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE 520
K +SWT++I G EA+ F M + KP+ VT++S++S C + GAL GK
Sbjct: 321 GKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKW 380
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
I +A G+ + + NAL+D+Y +CG M A F + E+ + +W L+ G A G+
Sbjct: 381 IDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGE 440
Query: 580 GALAEEFFRKMID--SKGNWRKLMGLFRKC 607
A F +M++ K N + + + C
Sbjct: 441 FKEALGLFFQMVELGLKPNHITFLAVLQAC 470
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W + I+ KA+ ++ M+ G P+ +T SV AC+ L NL +H
Sbjct: 19 VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++ + + + +++DMY KC + A +F ++P ++V SW S+I G
Sbjct: 79 HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDR 138
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ F +M + ++ +SVT++ + + + L + IH+ ++IG+ D + N +
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA 198
Query: 543 MYVRCGRMKPAWNQFNSNERDVS---AWNILLTGYAERGQGALAEEFFRKMI 591
Y +CG A F+ ++ + +WN ++ GYA Q + A FF+KM+
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKML 250
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 257/488 (52%), Gaps = 6/488 (1%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
++ +G LH+ + K S S + L N+ ++ + K L A VF ++ ++D+ SWN
Sbjct: 20 QKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNC 79
Query: 167 LIGGYAKAGFFDEA--LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
LI GY++ G + + L+QRM + P+ +TF + + + G++ H I
Sbjct: 80 LINGYSQQGPTGSSFVMELFQRM-RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAI 138
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ DV V ++L+ MY K G L AR VFD MP+R+ ++W MISGY +
Sbjct: 139 KMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFE 198
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+F +MR D + +SV+SA + G+++H +K G +S+ N L+ MY
Sbjct: 199 VFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYA 258
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ ++ +VF K+ ++W+ MI+ Y S KA++ + M G P E T+
Sbjct: 259 KCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVG 318
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL+AC+ ++ G ++H ++ G S + I L+DMY+K + A + F+ + +
Sbjct: 319 VLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPD 378
Query: 465 VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
++ WTS+I G N + +AL ++ R M + PN +T+ S+L AC+ + A G++IHA
Sbjct: 379 LVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHA 438
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
++ G+ + + +AL MY +CG ++ F ERD+ +WN +++G ++ G G
Sbjct: 439 RTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKE 498
Query: 583 AEEFFRKM 590
A E F +M
Sbjct: 499 ALELFEEM 506
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 252/471 (53%), Gaps = 23/471 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H+V K V +G++ L+M+ K G L A VF +M +R+ +W +I GYA
Sbjct: 130 GQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAI 189
Query: 174 AGFFDEALSLYQRMFWVGGVKPDV--YTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEA 230
EA +++ M + DV + F VL VP+ + GK++H ++ G
Sbjct: 190 QRLAGEAFEVFELM---RREEEDVNEFAFTSVLSALA-VPEFVDSGKQIHCLAVKTGLLV 245
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ ++NAL+TMY KCG L + VF+ ++ I+W+AMI+GY ++G+ K L LF M
Sbjct: 246 FLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMH 305
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
++P TL V++A + G++VH Y++K+GF + + L+ MY G E
Sbjct: 306 FAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTE 365
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ K F+ ++ D+V WT+MI+ Y + + A+ Y M+ EG +P+E+T+ASVL AC+
Sbjct: 366 DARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACS 425
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L D G ++H ++ GL + I + L MY+KC +++ VF ++P++++ISW +
Sbjct: 426 NLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNA 485
Query: 471 IILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I GL N EAL F +M + KP+ VT V++LSAC+ +G + G L
Sbjct: 486 MISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG------WLYFR 539
Query: 530 VAFD--GFLPNA-----LLDMYVRCGRMKPAWNQFNSNERD--VSAWNILL 571
+ FD G LP ++D+ R G++ A S D + W ILL
Sbjct: 540 MMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILL 590
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 223/432 (51%), Gaps = 2/432 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A + + M+ V+E A +++ D G +H + KT + + + NA +
Sbjct: 195 EAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALV 254
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G L + VF D++ +W+ +I GYA++G +AL L+ RM + G+ P
Sbjct: 255 TMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHF-AGINPSE 313
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T VL C ++ GK+VH ++++ G+E+ + ++ AL+ MY K G AR F+
Sbjct: 314 FTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNY 373
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + D + W +MI+GY +NGE L L+ M+ + P+ +T++SV+ A + G
Sbjct: 374 LQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQG 433
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++H IK G +V++ + L MY GN EEG VF RM +D++SW MIS +
Sbjct: 434 RQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQN 493
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLISYIII 436
+A+E ++ M + + PD++T +VLSAC+ +G +D G + + GL+ +
Sbjct: 494 GYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEH 553
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
++D+ S+ + +A E + + I+LG N R++E + + ++ L
Sbjct: 554 YACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELG 613
Query: 497 PNSVTLVSILSA 508
+ +LS
Sbjct: 614 SQESSAYVLLSG 625
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +ALK M I E LV ++ C +EG +H+ + K + +
Sbjct: 291 SGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYI 350
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G A F + DL W +I GY + G ++ALSLY RM + G
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRM-QMEG 409
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T VL+ C + +G+++H I++G +V + +AL TMY KCG+L
Sbjct: 410 ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGN 469
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VF MP+RD ISWNAMISG +NG + L LF MR+ PD +T +V+SA +G
Sbjct: 470 IVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMG 529
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 236/453 (52%), Gaps = 8/453 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
++N+LI Y + + Y M D + P +L+ C G+E+H
Sbjct: 54 NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ G+ +DV V NAL+ MY KCG LV ARLVFD MP+RD +SW M+ Y + + +
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLI 340
L L M+ V V + L S+I+ + D K GR VHGY+++ + +VS+ LI
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G +++F R+ + VVSWT MI+ S D+ + + M E P+EI
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ S+++ C +G LDLG H +R G + + LIDMY KC + A +F+ +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
K+V W+ +I + + F +M+ N +KPN+VT+VS+LS CA GAL GK
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERG 578
HA+ R G+ D L AL++MY +CG + A + FN + +RD+ WN ++ G++ G
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473
Query: 579 QGALAEEFFRKMIDSKG---NWRKLMGLFRKCQ 608
G A E F +M +S G N + +F C
Sbjct: 474 CGKEALELFSEM-ESHGVEPNDITFVSIFHACS 505
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 217/424 (51%), Gaps = 4/424 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L +L++ C D G LH K V + NA ++M+ K G L A V
Sbjct: 86 LDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLV 145
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M +RD+ SW ++G Y ++ F EAL L + M +VG VK ++ G + D
Sbjct: 146 FDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVG-VKLSGVALISLIAVFGNLLD 204
Query: 213 LKRGKEVHVHVIR-FGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
+K G+ VH +++R G E +V + ALI MY K G L A+ +FD + KR +SW MI
Sbjct: 205 MKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMI 264
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+G + +G F M E + P+ +TL S+I+ VG LG+ H Y+++ GF
Sbjct: 265 AGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFG 324
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+++ LI MY G +F+ ++ KDV W+ +IS Y D+ + M
Sbjct: 325 MSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEM 384
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
P+ +T+ S+LS CA G LDLG H R GL +I+ LI+MY+KC +
Sbjct: 385 LNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDV 444
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A +F++ +++ W +++ G ++ EAL F +M + ++PN +T VSI AC
Sbjct: 445 TIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHAC 504
Query: 510 ARIG 513
+ G
Sbjct: 505 SHSG 508
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 211/455 (46%), Gaps = 28/455 (6%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM--SHLSVRLGNA 135
+AL+ + MQ + + + AL++L+ + G +H + + + + V + A
Sbjct: 172 EALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTA 231
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L A +F ++ R + SW V+I G ++ DE + RM + P
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRML-EEKLFP 290
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ T ++ CG V L GK H +++R G+ + +V ALI MY KCG + AR +F
Sbjct: 291 NEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALF 350
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+G+ K+D W+ +IS Y + LF+ M V P+ +T+ S++S G
Sbjct: 351 NGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALD 410
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG+ H Y+ + G DV + LI MY G+ +F+ +D+ W TM++ +
Sbjct: 411 LGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFS 470
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+A+E + ME+ G P++IT S+ AC+ +GL+ +
Sbjct: 471 MHGCGKEALELFSEMESHGVEPNDITFVSIFHACS----------------HSGLMEHY- 513
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
L+D+ + +D+A + +P + N I W +++ +L+ + RK +L
Sbjct: 514 --GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARK-ILE 570
Query: 495 LKPN----SVTLVSILSACARIGALMCGKEIHAHA 525
L P SV +I ++ R + +E +H+
Sbjct: 571 LDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHS 605
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++ K + M E + +E L++L+ C + D G + H+ + + +S+ L A
Sbjct: 273 LDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTA 332
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G +G+A +F + +D+ W+VLI YA D+ +L+ M VKP
Sbjct: 333 LIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEML-NNDVKP 391
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ T +L C L GK H ++ R G E DV + ALI MY KCGD+ AR +F
Sbjct: 392 NNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF 451
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ +RD WN M++G+ +G + L LF M V+P+ +T S+ A G
Sbjct: 452 NEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 235/428 (54%), Gaps = 10/428 (2%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R SW + ++ F EA+S Y M + GV PD Y FP VL+ G+ DL GK+
Sbjct: 40 RSQASWIESLRFNTRSNLFREAISTYVDMI-LSGVSPDSYAFPVVLKAVTGLQDLNLGKQ 98
Query: 219 VHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H HV+++GYE + V + N+L+ Y KC +L VFD + +RD +SWN++IS +
Sbjct: 99 IHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQ 158
Query: 278 EYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDE--KLGREVHGYVIKMGFSDDVS 334
E+ L F M+ E L F +S VI+ S L E +LG+++HGY + G +
Sbjct: 159 EWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFT 218
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N L+ MY + G ++ + +F E ++++SW TMIS + + +A+ + + M EG
Sbjct: 219 -NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEG 277
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKA 453
PD +T+ASVL AC+ L L G ++H A+R+G LI + + L+DMY C +
Sbjct: 278 VKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSG 337
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACAR 511
VF I ++ W ++I G N +AL+ F +M + L PN+ T+ SI+ A AR
Sbjct: 338 RRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+ + IH + ++ + D ++ NAL+DMY R +M+ + F+S E RD+ +WN +
Sbjct: 398 CESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTM 457
Query: 571 LTGYAERG 578
+TGY G
Sbjct: 458 ITGYVISG 465
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 259/525 (49%), Gaps = 27/525 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ C E AL+ M ++ LV+ V C R + EGL L +
Sbjct: 148 NSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKH-EGLRLGKQIHG 206
Query: 124 TM---SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
H S NA ++M+ G L A ++F DR+L SWN +I +++ F EA
Sbjct: 207 YCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEA 266
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALI 239
L + R + GVKPD T VL C + L GKE+H + +R G + V +AL+
Sbjct: 267 L-MSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALV 325
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY CG + R VFDG+ +R WNAMI+GY +N K LMLFI M V + P+
Sbjct: 326 DMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNT 385
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++S++ AS +HGYVIK D V N L+ MY E + +F
Sbjct: 386 TTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDS 445
Query: 359 MESKDVVSWTTMIS------CYEGSVL-------PDKAVETYQMMEAEGSMPDEITIASV 405
ME +D+VSW TMI+ CY ++L ++ + + + P+ IT+ +V
Sbjct: 446 MEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTV 505
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L CA L L G ++H A+R L S + + + L+DMY+KC C++ + VF Q+P KNV
Sbjct: 506 LPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNV 565
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMML------NLKPNSVTLVSILSACARIGALMCG- 518
I+W I++ ++ EAL F+ M+ +KP VT+++IL+AC+ G + G
Sbjct: 566 ITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGL 625
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD 563
K H G+ + D+ R G+++ A++ N+ D
Sbjct: 626 KLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINTMPSD 670
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 260/504 (51%), Gaps = 24/504 (4%)
Query: 114 GLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ VV SV + N+ ++ + K +L + VF ++ +RDL SWN LI +
Sbjct: 96 GKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFC 155
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV---PDLKRGKEVHVHVIRFGYE 229
+A ++ AL + R ++P +T + C + L+ GK++H + R G+
Sbjct: 156 RAQEWELALEAF-RFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHW 214
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ NAL+TMY G L A+ +F R+ ISWN MIS + +N +++ LM M
Sbjct: 215 STF-TNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYM 273
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGN 348
V PD +TL+SV+ A + G+E+H Y ++ G ++ V + L+ MY + G
Sbjct: 274 VLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQ 333
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLS 407
G +VF + + W MI+ Y + +KA+ + +M+ G P+ T+AS++
Sbjct: 334 VGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVP 393
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A A + +H ++ L + N L+DMYS+ + ++ + +F + ++++S
Sbjct: 394 ASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVS 453
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-----LN---------LKPNSVTLVSILSACARIG 513
W ++I G ++ +AL+ +M +N KPNS+TL+++L CA +
Sbjct: 454 WNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLA 513
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLT 572
AL GKEIHA+A+R +A + + +AL+DMY +CG + + F+ ++V WN+++
Sbjct: 514 ALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVM 573
Query: 573 GYAERGQGALAEEFFRKMIDSKGN 596
Y G G A E F+ M+ +KG+
Sbjct: 574 AYGMHGNGEEALELFKDMV-AKGD 596
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 7/238 (2%)
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+S+ SW + S L +A+ TY M G PD VL A L +L+LG
Sbjct: 38 QSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGK 97
Query: 420 KLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H ++ G S + IAN+L++ Y KC +D +VF +I +++++SW S+I
Sbjct: 98 QIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRA 157
Query: 479 NRSFEALIFFRKMML-NLKPNSVTLVSILSACARI---GALMCGKEIHAHALRIGVAFDG 534
AL FR M+ +L+P+S TLVS + AC+ + L GK+IH + R G +
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWST 216
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F NAL+ MY GR+ A F E R++ +WN +++ +++ + A R M+
Sbjct: 217 FTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMV 274
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 267/534 (50%), Gaps = 6/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN G+L+ +K M+ I + ++ +C K D G+ LH +V
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ LSM+ K G A +F M D +WN +I GY ++G +E+L+
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD TF +L + +L+ K++H +++R D+ + +ALI Y
Sbjct: 328 FYEMI-SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A+ +F D + + AMISGY NG Y+ L +F + +V + P+ +TL S
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ ++ KLGRE+HG++IK GF + ++ +I MY G ++F R+ +D
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW +MI+ S P A++ ++ M G D ++I++ LSACA L + G +H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ L S + +TLIDMY+KC + A+ VF + +KN++SW SII + + +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 484 ALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNAL 540
+L F +M+ ++P+ +T + I+S+C +G + G + + G+ +
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+D++ R GR+ A+ S D W LL LAE K++D
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 271/534 (50%), Gaps = 3/534 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG L QAL + M + D LV+ C + + +L VS
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + ++ + ++++G + +F ++ +D WNV++ GYAK G D +
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + + P+ TF CVL C + G ++H V+ G + + + N+L++MY
Sbjct: 227 FSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG A +F M + D ++WN MISGY ++G + L F M V PD +T SS
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + + +++H Y+++ S D+ + + LI Y + +FS+ S D
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV +T MIS Y + L ++E ++ + P+EIT+ S+L L L LG +LH
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ G + I +IDMY+KC ++ A E+F ++ ++++SW S+I ++
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ FR+M ++ + + V++ + LSACA + + GK IH ++ +A D + + L+D
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
MY +CG +K A N F + E+++ +WN ++ G+ + F +M++ G
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 195/396 (49%), Gaps = 4/396 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KR 261
+L+ C L++GK+VH +I D ++ MY CG +F + +R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 262 DRI-SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
I WN++IS + NG + L + M V PD T ++ A + + K +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
V +G + V + LIK YL +G + K+F R+ KD V W M++ Y
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
D ++ + +M + P+ +T VLS CA +DLG++LH L + +G+ I N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ MYSKC D A ++F + + ++W +I G + E+L FF +M+ + + P++
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T S+L + ++ L K+IH + +R ++ D FL +AL+D Y +C + A N F+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
N DV + +++GY G + E FR ++ K
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 259/513 (50%), Gaps = 47/513 (9%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H ++ N LS + K G + Y+F M RD SWN LI GYA G ++
Sbjct: 66 VFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQS 125
Query: 181 LSLYQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
+ Y M G + TF +L +K G+++H HV++FG+ + V V + L+
Sbjct: 126 VKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLV 185
Query: 240 TMYVKCGDLVRARLVFDGMPK-------------------------------RDRISWNA 268
MY K G + AR VFD +P+ RD ISW +
Sbjct: 186 DMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTS 245
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MI+G+ +NG + +F M+ + D T SV++A V + G++VH Y+I+
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ D++ V + L+ MY N + E VF +M K+VVSWT M+ Y + ++AV+T+
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ G PD+ T+ SV+S+CA L +L+ G + H A+ +GLIS+I ++N L+ +Y KC
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
I+ + +F++I K+ ++WT+++ G ++ E + F M+ + LKP+ VT + +LS
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN-- 560
AC+R G + G +I + G +P ++D++ R GR++ A N N
Sbjct: 486 ACSRAGLVEKGNQIFESMINE----HGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPF 541
Query: 561 ERDVSAWNILLTG---YAERGQGALAEEFFRKM 590
D +W LL+ Y G A EF ++
Sbjct: 542 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMEL 574
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 205/391 (52%), Gaps = 35/391 (8%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVL 293
N +++ Y K G + +FD MP+RD +SWN++ISGY G + + + +M +
Sbjct: 79 NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY---------- 343
+ + +T S+++ + G KLGR++HG+V+K GF V V +PL+ MY
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 344 ---------------------LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ G E+ +++F M +D +SWT+MI+ + + L
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A++ ++ M+ E D+ T SVL+AC + L G ++H +RT I +A+ L+D
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MY KCK I A VF ++ KNV+SWT++++G N S EA+ F M ++P+ T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
L S++S+CA + +L G + HA AL G+ + NAL+ +Y +CG ++ + FN +
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+D W L++GYA+ G+ F M+
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESML 469
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 156/340 (45%), Gaps = 66/340 (19%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT------- 369
+ +H ++IK + + N LI Y G+ KVF +M ++ SW T
Sbjct: 28 AKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 87
Query: 370 ------------------------MISCYEGSVLPDKAVETYQ-MMEAEGSMP-DEITIA 403
+IS Y G L ++V+ Y M++ +GS + IT +
Sbjct: 88 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFS 147
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
++L + G + LG ++H ++ G +SY+ + + L+DMYSK I A +VF ++P+K
Sbjct: 148 TLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK 207
Query: 464 NV-------------------------------ISWTSIILGLRLNNRSFEALIFFRKMM 492
NV ISWTS+I G N +A+ FR+M
Sbjct: 208 NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMK 267
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
L NL+ + T S+L+AC + AL GK++HA+ +R + F+ +AL+DMY +C +K
Sbjct: 268 LENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIK 327
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F ++V +W +L GY + G A + F M
Sbjct: 328 SAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 15/308 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A+ M+ N+ +D+ +++ C EG +H+ + +T ++ +
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K ++ A VF KM +++ SW ++ GY + G+ +EA+ + M G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM-QKYG 371
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD +T V+ +C + L+ G + H + G + + V NAL+T+Y KCG + +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ + +D ++W A++SGY + G+ + + LF M + PD +T V+SA G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 313 DEKLGREV-------HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDV 364
+ G ++ HG V D C +I ++ G EE ++M S D
Sbjct: 492 LVEKGNQIFESMINEHGIVP----IQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDA 545
Query: 365 VSWTTMIS 372
+SW T++S
Sbjct: 546 ISWATLLS 553
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 258/501 (51%), Gaps = 8/501 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVV--SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
LV+L+R C R + +H + SK +H S+ L N + K D+ A +F +
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R+ FSW VLI G A+ G F + + M G+ PD + + +L+ C G+ ++
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQICIGLDSIEL 189
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G VH ++ G+ + V AL+ MY K ++ + VF+ M + + +SWNAMI+G+
Sbjct: 190 GNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTS 249
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N Y+ LF+ M V PD T V A ++ D +EV GY +++G + V
Sbjct: 250 NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV 309
Query: 336 CNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
LI M G+ +E +F+ + + W MIS Y S +KA+E + M
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDK 452
D T SV +A A L L LG K+H A+++GL ++Y+ I+N + + Y+KC ++
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
+VF+++ D+++ISWTS++ + +A+ F M + PN T S+L +CA
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ L G+++H ++G+ D + +AL+DMY +CG + A FN + D +W +
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAI 549
Query: 571 LTGYAERGQGALAEEFFRKMI 591
+ G+A+ G A + FR+M+
Sbjct: 550 IAGHAQHGIVDDALQLFRRMV 570
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 274/540 (50%), Gaps = 22/540 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS--VVSKTMSH 127
L NG ++ MQ I D+ A ++++C + G +H+ V+ SH
Sbjct: 146 LAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSH 205
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V A L+M+ K ++ ++ VF M + ++ SWN +I G+ + +A L+ RM
Sbjct: 206 TFV--STALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV PD TF V + G + D+ + KEV + + G +++ V ALI M KCG
Sbjct: 264 MG-EGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGS 322
Query: 248 LVRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L AR +F+ + R WNAMISGY +G K L LF M + + D T SV
Sbjct: 323 LQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVF 382
Query: 306 SASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+A + LG++VH IK G + VS+ N + Y G+ E+ KVF+RME +D+
Sbjct: 383 NAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDL 442
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SWT++++ Y DKA+E + M AEG P++ T +SVL +CA L L+ G ++H +
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ GL I + L+DMY+KC C+ A +VF++I + + +SWT+II G + +A
Sbjct: 503 ICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDA 562
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN----- 538
L FR+M+ L ++PN+VT + +L AC+ G + G + ++ G +P
Sbjct: 563 LQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQY----FKLMKKTYGLVPEMEHYA 618
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++D+ R G + A +F S E + W LL G L E +K++ K
Sbjct: 619 CIVDLLSRVGHLNDAM-EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA 677
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 236/451 (52%), Gaps = 4/451 (0%)
Query: 107 WKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
WK G G +H++V + + + + ++ + + A VF +M +RD+ SW +
Sbjct: 135 WK-GRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTL 193
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I +A+ G +D L M G KP+ T +L CG V + +G V+ V +
Sbjct: 194 MISAFAQCGQWDNVLRSLDEM-QSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEY 252
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G EADVD+ NALI MYVKCG + A F GMP R+ SWN +I G+ +NG++ + L +F
Sbjct: 253 GIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMF 312
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M V PD +TL SV+S +GD + GR +H Y+ D+ + N LI MY
Sbjct: 313 EEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKC 372
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ E +F M +D+VSWT M+ Y + A + M+ M E+ + S+L
Sbjct: 373 GDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLL 432
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
SAC+ LG LD G ++H + + + + + L+DMY+KC CID A E+F ++ K +
Sbjct: 433 SACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTL 492
Query: 467 SWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
+W ++I GL + EA+ F ++ + + KP+++TL +L AC +G + G
Sbjct: 493 AWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNL 552
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
L +G+ D ++D+ R G + A+N
Sbjct: 553 MLTLGIVPDNEHYGCIVDLLGRAGLLDEAYN 583
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 236/461 (51%), Gaps = 6/461 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ V D+ +A VF +M WN +I GY +AL L++ M GV P
Sbjct: 59 LLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMR-RSGVSP 117
Query: 196 DVYTFPCVLRTCGGVPDLK---RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
D YT V ++ K G VH V R G+ +D+ V++ LI Y + AR
Sbjct: 118 DNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDAR 177
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ M +RD +SW MIS + + G++ L M+ P+ +T+ S++SA V
Sbjct: 178 KVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVR 237
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G V+ V + G DV + N LI MY+ G + K F M ++ SW T+I
Sbjct: 238 AVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLID 297
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + +A+ ++ M ++G +PD IT+ SVLS A LG+L G LH +
Sbjct: 298 GFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHC 357
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
II+ N+LI+MY+KC + A +F + ++++SWT+++ G + A F M
Sbjct: 358 DIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMK 417
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ ++ + + LVS+LSAC+++GAL G+EIH++ V D +L +AL+DMY +CG +
Sbjct: 418 VRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCID 477
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F+ + AWN ++ G A +GQG A F +++
Sbjct: 478 AAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLL 518
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 224/440 (50%), Gaps = 7/440 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + L+ LD MQ ++ +++L+ C R D+GL++++ V + V +
Sbjct: 202 GQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIR 261
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+VK G + AW F M R+ SWN LI G+ + G EAL++++ M GV
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEML-SDGV 320
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PDV T VL T + DL++G+ +H ++ D+ + N+LI MY KCGD+ A +
Sbjct: 321 IPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEI 380
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ M +RD +SW AM+ GY + ++ LF M+ V M L S++SA +G
Sbjct: 381 IFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGA 440
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H Y+ + D+ + + L+ MY G + ++FSRM K ++W MI
Sbjct: 441 LDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGG 500
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+AV + Q+++ PD IT+ VL AC +G +D G+ L + G++
Sbjct: 501 LASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVP 560
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++D+ + +D+A ++P N + W S++ R+++R E +
Sbjct: 561 DNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHR-MELGKIIGQH 619
Query: 492 MLNLKPNSV---TLVSILSA 508
+++L PN V L+S L A
Sbjct: 620 IIDLAPNDVGAHVLISNLHA 639
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 199/381 (52%), Gaps = 8/381 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMY---VKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
E+H ++R +D V L+T+ V D+ AR VFD M + I WN MI GY
Sbjct: 36 ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYN 95
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK---LGREVHGYVIKMGFSD 331
M L LF MR V PD T+++V +S K G VH V ++GF+
Sbjct: 96 SCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFAS 155
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ V + LI Y + + E+ KVF M +DVVSWT MIS + D + + M+
Sbjct: 156 DLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQ 215
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+EG+ P++ITI S+LSAC + +D G+ ++ G+ + + I N LI MY KC C+
Sbjct: 216 SEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMS 275
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A + F +P +N SW ++I G N + EAL F +M+ + + P+ +TLVS+LS A
Sbjct: 276 DAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYA 335
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNI 569
++G L G+ +H + + D L N+L++MY +CG M A F N RD+ +W
Sbjct: 336 QLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTA 395
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ GY + Q A F M
Sbjct: 396 MVCGYVKGLQFRTAFNLFDDM 416
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE---GEKVFSRMESKDVVSWTTMISCYE 375
E+HG +++ D V L+ + S +R + KVF RM + W MI Y
Sbjct: 36 ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYN 95
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD---LGIKLHQLAMRTGLIS 432
P A+E ++ M G PD T+A+V + A + G +H L R G S
Sbjct: 96 SCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFAS 155
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + + LI+ Y K ++ A +VF ++ +++V+SWT +I + L +M
Sbjct: 156 DLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQ 215
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
KPN +T++S+LSAC ++ A+ G ++A G+ D + NAL+ MYV+CG M
Sbjct: 216 SEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMS 275
Query: 552 PAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
AW F R+ +WN L+ G+ + G+ A F +M+
Sbjct: 276 DAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEML 316
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 3/315 (0%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
TK+ N+ ++ NG ++AL + M + D LV+++ +G YLH+
Sbjct: 289 TKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHN 348
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ H + L N+ ++M+ K GD+ A +F M RD+ SW ++ GY K F
Sbjct: 349 YIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRT 408
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A +L+ M V V +L C + L +G+E+H ++ D+ + +AL+
Sbjct: 409 AFNLFDDMK-VRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALV 467
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY KCG + A +F M + ++WNAMI G G+ + + LF + ++ PD
Sbjct: 468 DMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDA 527
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+TL V+ A VG G ++ +G D ++ + G +E +
Sbjct: 528 ITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQK 587
Query: 359 ME-SKDVVSWTTMIS 372
M + V W ++++
Sbjct: 588 MPIQPNPVIWGSLLA 602
>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Brachypodium distachyon]
Length = 924
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 170/562 (30%), Positives = 279/562 (49%), Gaps = 19/562 (3%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLH 118
T + NS NG E + Y M L + DE L +++ G + G +H
Sbjct: 236 TASWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVH 295
Query: 119 SVVSKT--MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+ K + N+ ++ + +FG A VF ++ ++ SWNV+I G +
Sbjct: 296 GCIVKLGYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEK 355
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVV 235
EAL++++ M + +PD T V+ +CG L GK +H ++ R + + +
Sbjct: 356 AGEALAVFREM--LSECQPDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLG 413
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+L+ +Y+KC D A L+F MP RD ISWN M+SGY + + M RE+L +
Sbjct: 414 NSLLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQ--AMFRELLSE 471
Query: 296 P---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
T+ +VI + D + G+ VH +V+K GF+ VSV N L+ MY+ G+
Sbjct: 472 GLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVA 531
Query: 353 EKVF-SRMESKDVVSW-TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSAC 409
+ S M D++SW T ++ C + L A+E +Q M + + PD IT+ SVLSAC
Sbjct: 532 FTLLGSIMPVSDIISWNTAVVGCVQNG-LHRGALEAFQFMHSSLPLNPDSITLVSVLSAC 590
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L LG +H +A++ L+ + + N L+ MY + + A +F+ + D+N+ SW
Sbjct: 591 GTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWN 650
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
++ G NN AL F++KM PN + VSI+ AC ++ + GK IH H ++
Sbjct: 651 CMVSGFAQNNDGRRALQFYQKME-KFVPNEMCTVSIICACTQLRDVRHGKSIHGHVVKSD 709
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + FL +L+DMY +CGR+ A F +S E+ ++ WN +++ + G G + E F
Sbjct: 710 LQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIACWNSMISAFGFHGHGLRSIELFC 769
Query: 589 KMIDS--KGNWRKLMGLFRKCQ 608
MI S K + L C
Sbjct: 770 SMIHSGMKATRSTFIALLSACS 791
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 254/506 (50%), Gaps = 10/506 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVS-KTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
D LV ++ C + EG +H ++ K + H+ LGN+ L +++K D A +
Sbjct: 373 DFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLL 432
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F M RDL SWN ++ GY++ E R G+ + T V+ +C D
Sbjct: 433 FRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPED 492
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD-LVRARLVFDGMPKRDRISWNAMIS 271
L+ GK VH V+++G+ + V VVNAL+ MY+ CGD LV L+ MP D ISWN +
Sbjct: 493 LRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVV 552
Query: 272 GYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
G +NG + L F M L ++PD +TL SV+SA + + LG+ +H +K
Sbjct: 553 GCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLV 612
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ V N L+ MY F + E E +F + +++ SW M+S + + +A++ YQ M
Sbjct: 613 FNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKM 672
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
E +P+E+ S++ AC L ++ G +H +++ L + + ++ +L+DMYSKC +
Sbjct: 673 EK--FVPNEMCTVSIICACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRL 730
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
D A+ VF +K++ W S+I + ++ F M+ + +K T +++LSAC
Sbjct: 731 DIAVRVFESSTEKSIACWNSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSAC 790
Query: 510 ARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-- 566
+ G G K + + + G+ ++DM R GR++ A S + A
Sbjct: 791 SHAGLTDEGLKYYNLMSEKFGITPTPEHHVCIVDMLGRAGRLQEAHKFVESLPKSKEAHG 850
Query: 567 -WNILLTGYAERGQGALAEEFFRKMI 591
W LL+ + + + + E R+++
Sbjct: 851 VWGALLSACSNKSELRMGEAIARQLL 876
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 249/493 (50%), Gaps = 21/493 (4%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D G+ LH+ K + L NA + M+ K G + VF M D SWN + GG
Sbjct: 187 DLGMALHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGS 246
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYE- 229
G + + ++ M + V+ D T V+ L G+ VH +++ GYE
Sbjct: 247 TFNGLSEVSACYFREMIRL-AVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYED 305
Query: 230 -ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
A V N+LIT Y + G A VF + K++ +SWN MI G EN + + L +F
Sbjct: 306 TAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVF-- 363
Query: 289 MREVLVD--PDFMTLSSVISASELVGDEKL---GREVHGYVI-KMGFSDDVSVCNPLIKM 342
RE+L + PDF TL +VI + GD+ L G+ +HGY+ K F + S+ N L+ +
Sbjct: 364 -REMLSECQPDFATLVAVILS---CGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGL 419
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYE-GSVLPDKAVETYQMMEAEGSMPDEIT 401
Y+ + +F M +D++SW TM+S Y L ++A ++ + +EG T
Sbjct: 420 YMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTT 479
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI- 460
I +V+ +C+C +L G +H ++ G S + + N L+ MY C A + I
Sbjct: 480 ILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIM 539
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCG 518
P ++ISW + ++G N AL F+ M L L P+S+TLVS+LSAC + G
Sbjct: 540 PVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLG 599
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
K IH+ AL+ + F+ + NALL MY R + A F S +R++ +WN +++G+A+
Sbjct: 600 KSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQN 659
Query: 578 GQGALAEEFFRKM 590
G A +F++KM
Sbjct: 660 NDGRRALQFYQKM 672
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 222/457 (48%), Gaps = 9/457 (1%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
D A +F + D D+ WN +IG +A +A++L++RM V G D T +L
Sbjct: 118 DARAALVLFHEAEDPDVILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVML 177
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+L G +H ++ + D+++ NAL+ MY KCG + VF MP D
Sbjct: 178 SGASRAGELDLGMALHAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTA 237
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV-GDEKLGREVHGY 323
SWN++ G NG F M + V D +TLSSVISAS G G VHG
Sbjct: 238 SWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGC 297
Query: 324 VIKMGFSDDV--SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
++K+G+ D SV N LI Y FG E+ EKVF R+ K+ VSW MI +
Sbjct: 298 IVKLGYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAG 357
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTL 440
+A+ ++ M +E PD T+ +V+ +C G L G +H R L + N+L
Sbjct: 358 EALAVFREMLSE-CQPDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSL 416
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLN-LKPN 498
+ +Y KC A +F +P +++ISW +++ G R ++ EA FR+++ L
Sbjct: 417 LGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCT 476
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T+++++ +C+ L GK +H+ L+ G A + NAL+ MY+ CG A+
Sbjct: 477 MTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLG 536
Query: 559 S--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
S D+ +WN + G + G A E F+ M S
Sbjct: 537 SIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSS 573
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 251/478 (52%), Gaps = 7/478 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H + N +S +VK GDL A ++F M DR + +W +L+G YA FDEA
Sbjct: 66 VYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEA 125
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCG-GVPDLKRGKEVHVHVIRFGYEAD--VDVVNA 237
L+++M + PD TF +L C VP G +VH ++ G++ + + V N
Sbjct: 126 FKLFRQMCRSCTL-PDYVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNV 183
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ Y + L A ++F+ + +D +++N +I+GY ++G Y + + LF+ MR+ P
Sbjct: 184 LLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPS 243
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T S V+ A + D LG+++HG + GFS D SV N ++ Y E +F+
Sbjct: 244 DFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFN 303
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M D VS+ +IS Y + ++++ ++ M+ G A++LS A L +L +
Sbjct: 304 EMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQV 363
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H A+ S + + N+L+DMY+KC+ D+A +F + ++ +SWT++I G
Sbjct: 364 GRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQ 423
Query: 478 NNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
L F KM NL+ + T ++L A A +L+ GK++HA +R G + F
Sbjct: 424 KGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFS 483
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ L+DMY +CG +K A F +R+ +WN L++ YA+ G G A F KMI S
Sbjct: 484 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQS 541
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 239/489 (48%), Gaps = 17/489 (3%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++C + +L + + + N V ++A V V K G+D L+L
Sbjct: 129 FRQMCRSCTLPDYVTFTTLLPGCNDAVPQNA-VGQVHAFAVKLGFDTNLFL--------- 178
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ N L + + L A +F ++ D+D ++N LI GY K G + EA+ L+ +
Sbjct: 179 ----TVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLK 234
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G KP +TF VL+ G+ D G+++H + G+ D V N ++ Y K
Sbjct: 235 MRQ-SGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHD 293
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
++ R +F+ MP+ D +S+N +IS Y + +Y + L LF M+ + D ++++S
Sbjct: 294 RVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLS 353
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ + ++GR+VH I + V N L+ MY +E E +F + + VS
Sbjct: 354 IAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS 413
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT +IS Y L ++ + M D+ T A+VL A A +L LG +LH +
Sbjct: 414 WTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFII 473
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
R+G + + + L+DMY+KC I A++VF ++PD+N +SW ++I N A+
Sbjct: 474 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIG 533
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMY 544
F KM+ + L+P+SV+++ +L AC+ G + G E A + G+ +LD+
Sbjct: 534 AFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLL 593
Query: 545 VRCGRMKPA 553
R GR A
Sbjct: 594 GRNGRFAEA 602
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 189/410 (46%), Gaps = 37/410 (9%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ V +I+ G+ D N + ++ G + A V+D MP ++ +S N MISGY +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 277 GEYMKGLMLFIMMREVLVD-------------------------------PDFMTLSSVI 305
G+ LF M + V PD++T ++++
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 306 SA-SELVGDEKLGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++ V +G +VH + +K+GF + ++VCN L+K Y + +F + K
Sbjct: 149 PGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDK 207
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D V++ T+I+ YE L +A+ + M G P + T + VL A L + LG +LH
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLH 267
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
L++ TG + N ++ YSK + + +F+++P+ + +S+ +I +
Sbjct: 268 GLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYE 327
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
E+L FR+M + + ++LS A + +L G+++H A+ + N+L+
Sbjct: 328 ESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLV 387
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
DMY +C A F S ++R +W L++GY ++G + F KM
Sbjct: 388 DMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKM 437
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 260/501 (51%), Gaps = 22/501 (4%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIG 169
Y +G H + ++ + + N+ LS++ + + A +FG+M R D+ SW+V+IG
Sbjct: 164 YSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIG 222
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G+ + G ++ +++ M G+ PD T VL+ C + D+ G VH VI G E
Sbjct: 223 GFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLE 282
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D+ V N+LI MY KC ++ A F +P+++ ISWN M+S Y N +++ L L M
Sbjct: 283 DDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTM 342
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ D +TL++V+ ++ D R VHG +I+ G+ + + N +I Y
Sbjct: 343 VREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLV 402
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF M KDVV+W+TMI+ + + PD+A+ ++ M E +P+ ++I +++ AC
Sbjct: 403 ELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEAC 461
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L H +A+R GL S + I ++IDMYSKC I+ ++ F+QIP KNV+ W+
Sbjct: 462 AVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWS 521
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-----KEIHA 523
++I R+N + EAL+ F K+ N KPN+VT +S+LSAC+ G + G +
Sbjct: 522 AMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQK 581
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA----WNILLT-----GY 574
H + G+ + ++DM R G+ A +++ A W LL+ G
Sbjct: 582 HGIEPGLEH----YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGN 637
Query: 575 AERGQGALAEEFFRKMIDSKG 595
G GA + + + S G
Sbjct: 638 ISLGSGAASRVLQLEPLSSAG 658
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 214/422 (50%), Gaps = 8/422 (1%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G + EAL LY + G D + P +L+ C G +H +I+ G ++
Sbjct: 25 SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTS-FNLGTAMHGCLIKQGCQSSTS 83
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ N+ I Y+K GDL A+ FD +D +SWN M+ G F NG M GL FI R
Sbjct: 84 IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ +L VI A + G HGY+ + GFS +SV N L+ +Y +
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAH 202
Query: 354 KVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACAC 411
K+F M + DVVSW+ MI + ++ ++ M E + PD +T+ SVL AC
Sbjct: 203 KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTN 262
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L ++ LG +H L + GL + + N+LIDMYSKC + A + F +IP+KN+ISW +
Sbjct: 263 LKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLM 322
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR-IGALMCGKEIHAHALRIG 529
+ LN EAL M+ + + VTL ++L + +L C + +H +R G
Sbjct: 323 LSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKG 381
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ L N+++D Y +C ++ A F+ N++DV AW+ ++ G+A G+ A F+
Sbjct: 382 YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFK 441
Query: 589 KM 590
+M
Sbjct: 442 QM 443
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 277/554 (50%), Gaps = 19/554 (3%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNIC----VDEDALVNLVRLCEWKRGYDEGLYLHSV 120
S++ + +G+ ++AL+ E+ I D L ++++ C ++ G +H
Sbjct: 17 SKIKDASYSGNWQEALQLY---HEIRISGAQLSDTWVLPSILKACS-NTSFNLGTAMHGC 72
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ K S + N+ + ++K+GDL A F ++D SWNV++ G G
Sbjct: 73 LIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAG 132
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + + + +P++ + V++ + +G H ++ R G+ A + V N+L++
Sbjct: 133 LCWFIKGRF-AHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLS 191
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFM 299
+Y + +L + + D +SW+ MI G+ + GE +G ++F M+ E + PD +
Sbjct: 192 LYAEVHMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGV 251
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ SV+ A + D LG VHG VI G DD+ V N LI MY N K F +
Sbjct: 252 TVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI 311
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLD 416
K+++SW M+S Y +L + +E + M EG+ DE+T+A+VL +
Sbjct: 312 PEKNIISWNLMLSAY---ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSL 368
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+H + +R G S ++ N++ID Y+KC ++ A VF + K+V++W+++I G
Sbjct: 369 KCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFA 428
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N + EA+ F++M + PN+V++++++ ACA L K H A+R G+A + +
Sbjct: 429 RNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDI 488
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID--S 593
+++DMY +CG ++ + FN +++V W+ +++ + G A F K+ +
Sbjct: 489 GTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGT 548
Query: 594 KGNWRKLMGLFRKC 607
K N + L C
Sbjct: 549 KPNAVTALSLLSAC 562
>gi|356577133|ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Glycine max]
Length = 773
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 263/510 (51%), Gaps = 7/510 (1%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
+D++ E + C + + + + +RLC +E +H++V K H + N + +++
Sbjct: 229 IDNLAEKSQCFNPELVAHWLRLC---YNMEEVGRVHTIVLKFFIHPVTYVDNNLICSYLR 285
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A VF M ++ +W +I GY K DEA L+Q GV + F C
Sbjct: 286 LGKLAQARRVFDGMSRKNTVTWTAIIDGYLKFNLDDEAFKLFQDCV-KHGVPANSKMFVC 344
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
++ CG DL+ GK++H +++ + ++ V NA++ Y KCG++ A FD M +RD
Sbjct: 345 IMNLCGRRVDLELGKQIHARILKSRWR-NLIVDNAVVHFYAKCGNISSAFRAFDCMAERD 403
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I W MI+ + G + L + M P+ T+ S + A K G ++HG
Sbjct: 404 VICWTTMITACSQQGFGHEALSMLSQMLSDGFYPNEYTICSALKACGENKALKFGTQLHG 463
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+IK DV + L+ MY G + + VF RM ++ +WT++IS Y + ++
Sbjct: 464 AIIKKICKSDVFIGTSLVDMYAKCGVMVDSKVVFDRMRIRNTATWTSIISGYARNGFGEE 523
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A +++M+ + +++T+ SVL AC + +L G ++H +++ + + I + +TL+
Sbjct: 524 ATSFFRLMKMKRIHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTLVW 583
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
Y KCK A +V +P ++V+SWT+II G EAL F ++MM + PNS T
Sbjct: 584 FYCKCKEYSYAFKVLQYMPFRDVVSWTAIISGCARLGLEHEALEFLQEMMEEGVLPNSYT 643
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSN 560
S L ACA + A + GK IH++A + + + F+ +AL+ MY +CG + A+ F N
Sbjct: 644 YSSALKACAELEAPIQGKLIHSYASKTPASSNVFVNSALIYMYSKCGYVADAFQVFDNMP 703
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
ER+V +W ++ YA G A + +M
Sbjct: 704 ERNVVSWESMILAYARNGHAREALKLMHRM 733
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 225/454 (49%), Gaps = 5/454 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A K + + + V ++ LC + + G +H+ + K+ ++ + NA
Sbjct: 321 DEAFKLFQDCVKHGVPANSKMFVCIMNLCGRRVDLELGKQIHARILKSRWR-NLIVDNAV 379
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + K G++ A+ F M +RD+ W +I ++ GF EALS+ +M G P+
Sbjct: 380 VHFYAKCGNISSAFRAFDCMAERDVICWTTMITACSQQGFGHEALSMLSQML-SDGFYPN 438
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YT L+ CG LK G ++H +I+ ++DV + +L+ MY KCG +V +++VFD
Sbjct: 439 EYTICSALKACGENKALKFGTQLHGAIIKKICKSDVFIGTSLVDMYAKCGVMVDSKVVFD 498
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M R+ +W ++ISGY NG + F +M+ + + +T+ SV+ A +
Sbjct: 499 RMRIRNTATWTSIISGYARNGFGEEATSFFRLMKMKRIHVNKLTVLSVLMACGTIKSLLF 558
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GREVH +IK ++ V + L+ Y KV M +DVVSWT +IS
Sbjct: 559 GREVHAQIIKSNIHTNIYVGSTLVWFYCKCKEYSYAFKVLQYMPFRDVVSWTAIISGCAR 618
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
L +A+E Q M EG +P+ T +S L ACA L G +H A +T S + +
Sbjct: 619 LGLEHEALEFLQEMMEEGVLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFV 678
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ LI MYSKC + A +VF +P++NV+SW S+IL N + EAL +M
Sbjct: 679 NSALIYMYSKCGYVADAFQVFDNMPERNVVSWESMILAYARNGHAREALKLMHRMQAEGF 738
Query: 496 KPNSVTLVSILSACARI--GALMCGKEIHAHALR 527
+ +++SAC + G + E +H L
Sbjct: 739 VVDDYIHTTVISACGGVEHGDIHQDSEYSSHYLH 772
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 197/391 (50%), Gaps = 6/391 (1%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
LR C + ++ R VH V++F V N LI Y++ G L +AR VFDGM +++
Sbjct: 248 LRLCYNMEEVGR---VHTIVLKFFIHPVTYVDNNLICSYLRLGKLAQARRVFDGMSRKNT 304
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
++W A+I GY + + LF + V + +++ D +LG+++H
Sbjct: 305 VTWTAIIDGYLKFNLDDEAFKLFQDCVKHGVPANSKMFVCIMNLCGRRVDLELGKQIHAR 364
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
++K + + + V N ++ Y GN + F M +DV+ WTTMI+ +A
Sbjct: 365 ILKSRWRNLI-VDNAVVHFYAKCGNISSAFRAFDCMAERDVICWTTMITACSQQGFGHEA 423
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M ++G P+E TI S L AC L G +LH ++ S + I +L+DM
Sbjct: 424 LSMLSQMLSDGFYPNEYTICSALKACGENKALKFGTQLHGAIIKKICKSDVFIGTSLVDM 483
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTL 502
Y+KC + + VF ++ +N +WTSII G N EA FFR M M + N +T+
Sbjct: 484 YAKCGVMVDSKVVFDRMRIRNTATWTSIISGYARNGFGEEATSFFRLMKMKRIHVNKLTV 543
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
+S+L AC I +L+ G+E+HA ++ + + ++ + L+ Y +C A+
Sbjct: 544 LSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYVGSTLVWFYCKCKEYSYAFKVLQYMPF 603
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RDV +W +++G A G A EF ++M++
Sbjct: 604 RDVVSWTAIISGCARLGLEHEALEFLQEMME 634
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A + M+ I V++ +++++ C + G +H+ + K+ H ++ +
Sbjct: 518 NGFGEEATSFFRLMKMKRIHVNKLTVLSVLMACGTIKSLLFGREVHAQIIKSNIHTNIYV 577
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+ + + K + +A+ V M RD+ SW +I G A+ G EAL Q M G
Sbjct: 578 GSTLVWFYCKCKEYSYAFKVLQYMPFRDVVSWTAIISGCARLGLEHEALEFLQEMM-EEG 636
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ YT+ L+ C + +GK +H + + ++V V +ALI MY KCG + A
Sbjct: 637 VLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFVNSALIYMYSKCGYVADAF 696
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISA 307
VFD MP+R+ +SW +MI Y NG + L L M+ E V D++ ++VISA
Sbjct: 697 QVFDNMPERNVVSWESMILAYARNGHAREALKLMHRMQAEGFVVDDYIH-TTVISA 751
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +AL++L M E + + + ++ C +G +HS SKT + +V +
Sbjct: 620 GLEHEALEFLQEMMEEGVLPNSYTYSSALKACAELEAPIQGKLIHSYASKTPASSNVFVN 679
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + M+ K G + A+ VF M +R++ SW +I YA+ G EAL L RM G V
Sbjct: 680 SALIYMYSKCGYVADAFQVFDNMPERNVVSWESMILAYARNGHAREALKLMHRMQAEGFV 739
Query: 194 KPDVYTFPCVLRTCGGVP--DLKRGKEVHVHVIR 225
D Y V+ CGGV D+ + E H +
Sbjct: 740 VDD-YIHTTVISACGGVEHGDIHQDSEYSSHYLH 772
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 284/635 (44%), Gaps = 54/635 (8%)
Query: 7 AKTSQTPLRQNLRNPKTRIP-ETSFYFKPK-------------TRHFSSKNAQSVQVLNT 52
A SQTP+ + +P + SFYF K T H SK + +
Sbjct: 2 ASISQTPVTTAITLSPLCLPSQNSFYFPSKPPPTTSQPPPQPLTSHILSKPNHLHRCHFS 61
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
TS +P S L S Y + ++ D L NL+RL D
Sbjct: 62 SCTSQFLLSSPLSLTKPQNLESSFPLDSNYHSPQTNTDCLIEVDDLFNLLRLSVKYTDID 121
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
LH+ + K LGNA ++ ++K G + A+ VF M D+ S++ LI ++
Sbjct: 122 LARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFS 179
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K EA+ L+ RM + G++P+ Y+F +L C +L+ G +VH I+ GY V
Sbjct: 180 KLNRETEAIQLFFRM-RISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLV 238
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMRE 291
V NALI +Y KCG L A +FD MP+RD SWN MIS + Y K L LF ++ +
Sbjct: 239 FVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQN 298
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
D TLS++++A GRE+H Y I++G +++SV N +I Y G+
Sbjct: 299 KGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNH 358
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME-------------------- 391
+F RM +D+++WT MI+ Y L D AV+ + M
Sbjct: 359 VAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEG 418
Query: 392 -----------AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
EG+ + T+ V++AC L L++ ++H ++ G S I L
Sbjct: 419 LKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAAL 478
Query: 441 IDMYSKCKCIDKALEVFHQIPDK--NVISWTSIILGLRLNNRSFEALIFFRKMML--NLK 496
IDM SKC +D A +F + N I TS+I G N EA+ F + +
Sbjct: 479 IDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMV 538
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ V SIL C +G GK+IH AL+ G + + N+++ MY +C + A
Sbjct: 539 LDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKA 598
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
FN+ DV +WN L+ G QG A + M
Sbjct: 599 FNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSM 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 240/466 (51%), Gaps = 35/466 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M+ I +E + V ++ C + GL +H++ K V + NA +
Sbjct: 186 EAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALI 245
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G L HA ++F +M RD+ SWN +I K +++AL L++ + G K D
Sbjct: 246 GLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQ 305
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T +L C +G+E+H + IR G E ++ V NA+I Y +CG L +F+
Sbjct: 306 FTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFER 365
Query: 258 MPKRDRISWNAMISGYFE-------------------------------NGEYMKGLMLF 286
MP RD I+W MI+ Y E N E +K L LF
Sbjct: 366 MPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLF 425
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ M + + TL+ VI+A L+ ++ R++HG++IK GF + + LI M
Sbjct: 426 VRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKC 485
Query: 347 GNREEGEKVFSRMESK--DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIA 403
G ++ +++F + + + + T+MI Y + LP++A+ + ++EG+M DE+
Sbjct: 486 GRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFT 545
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S+L C LG ++G ++H A++TG + + + N++I MYSKC ID A++ F+ +P
Sbjct: 546 SILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGH 605
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSA 508
+V+SW +I G L+ + EAL + M +KP+++T V I+SA
Sbjct: 606 DVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSA 651
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 203/455 (44%), Gaps = 42/455 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ ++ L S E+AL+ + Q D+ L L+ C +G +H+
Sbjct: 273 NTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAI 332
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW------------------ 164
+ ++ + NA + + + G L H +F +M RD+ +W
Sbjct: 333 RIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVD 392
Query: 165 -------------NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
N L+ G+ K +AL+L+ RM G D +T V+ CG +
Sbjct: 393 MFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTD-FTLTGVINACGLLL 451
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR--DRISWNAM 269
L+ +++H +I+FG+ ++ + ALI M KCG + A +F + + I +M
Sbjct: 452 KLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSM 511
Query: 270 ISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
I GY NG + + LF + E + D + +S++ +G ++G+++H +K G
Sbjct: 512 ICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTG 571
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F ++ V N +I MY N ++ K F+ M DVVSW +I+ D+A+ +
Sbjct: 572 FHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWS 631
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN----TLIDMY 444
ME G PD IT ++SA + +L + L + +I + + +L+ +
Sbjct: 632 SMEKAGIKPDAITFVLIVSAYK-FTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVL 690
Query: 445 SKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+++A E+ +++P D V W +++ G RL+
Sbjct: 691 GYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLH 725
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++DL LH ++ G +++ N +I Y K + A EVF + +V+S++++I
Sbjct: 119 DIDLARALHASILKLGEDTHL--GNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALIS 176
Query: 474 GLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
NR EA+ +FFR + ++PN + V+IL+AC R L G ++HA A+++G +
Sbjct: 177 SFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQ 236
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ NAL+ +Y +CG + A + F+ +RD+++WN +++ + A E FR +
Sbjct: 237 LVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLN 296
Query: 592 DSKG 595
+KG
Sbjct: 297 QNKG 300
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 266/506 (52%), Gaps = 37/506 (7%)
Query: 90 NICVDEDALVNLVRLCEWKR---GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
N+ DE ++R C + E ++ ++ S S S + N + ++ K G L
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFES--STFICNPLIDLYFKNGFL 215
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF + RD SW +I G ++ G+ +EA+ L+ ++ VL
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI---------------VLSA 260
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C V + GK++H V++ G+ ++ V NAL+T+Y + G+L A +F M +RDR+S+
Sbjct: 261 CTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
N++ISG + G + L LF M PD +T++S++SA VG G++ H Y IK
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIK 380
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G + D+ V L+ +Y+ + D+ + CY +K+ +
Sbjct: 381 AGMTSDIVVEGSLLDLYV---------------KCSDIKTAHEFFLCYGQLDNLNKSFQI 425
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M+ EG +P++ T S+L C LG DLG ++H ++TG + +++ LIDMY+K
Sbjct: 426 FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 485
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
+D AL++F ++ + +V+SWT++I G +++ EAL F++M +K +++ S
Sbjct: 486 HGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASA 545
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
+SACA I AL G++IHA + G + D + NAL+ +Y RCG+++ A+ F+ +D
Sbjct: 546 ISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN 605
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
+WN L++G+A+ G A F +M
Sbjct: 606 VSWNSLVSGFAQSGYFEEALNIFAQM 631
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 247/500 (49%), Gaps = 31/500 (6%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
++ G LH +V K + NA ++++ + G+L A +F M RD S+N LI G
Sbjct: 267 FEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
A+ G+ + AL+L+++M + KPD T +L C V L GK+ H + I+ G +
Sbjct: 327 LAQQGYINRALALFKKMN-LDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ V +L+ +YVKC D+ A F + D ++ K +F M+
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQMQ 430
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ P+ T S++ +G LG ++H V+K GF +V V + LI MY G +
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLD 490
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
K+F R++ DVVSWT MI+ Y +A+ ++ M+ +G D I AS +SACA
Sbjct: 491 HALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA 550
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ LD G ++H + +G + I N L+ +Y++C + +A F QI K+ +SW S
Sbjct: 551 GIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNS 610
Query: 471 IILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
++ G + EAL F +M L+ NS T S +SA A I + GK+IH + G
Sbjct: 611 LVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTG 670
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ + NAL+ +Y +CG + D +WN ++TGY++ G G A + F
Sbjct: 671 YDSETEVSNALITLYAKCGTI------------DDISWNSMITGYSQHGCGFEALKLFED 718
Query: 590 M--IDSKGNWRKLMGLFRKC 607
M +D N +G+ C
Sbjct: 719 MKQLDVLPNHVTFVGVLSAC 738
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 253/528 (47%), Gaps = 55/528 (10%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
NE+ N S + YL M++ + + + L+ C R + +GL L
Sbjct: 57 NEMDGNAS---GIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGLKL---------- 103
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ ++ FGDL A VF +M R L WN + + L++RM
Sbjct: 104 ---------IDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRM 154
Query: 188 FWVGGVKPDVYTFPCVLRTCGG-VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
V+ D F VLR C G + +++H I G+E+ + N LI +Y K G
Sbjct: 155 L-TKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 213
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
L A+ VF+ + RD +SW AMISG +NG + ++LF + V+S
Sbjct: 214 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLS 259
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A V + G+++HG V+K GFS + VCN L+ +Y GN E++F M +D VS
Sbjct: 260 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 319
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ ++IS ++A+ ++ M + PD +T+AS+LSACA +G L G + H A+
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN-NRSFEAL 485
+ G+ S I++ +L+D+Y KC I A E F + G N N+SF+
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLDNLNKSFQ-- 424
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
IF + + + PN T SIL C +GA G++IH L+ G F+ ++ + L+DMY
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ G++ A F E DV +W ++ GY + + A F++M D
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 220/451 (48%), Gaps = 30/451 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L G + +AL M D + +L+ C G HS K
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIK 380
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + L ++VK D+ A F +C Y + +++ +
Sbjct: 381 AGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--LC-------------YGQLDNLNKSFQI 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + G+ P+ +T+P +L+TC + G+++H V++ G++ +V V + LI MY
Sbjct: 426 FTQM-QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G L A +F + + D +SW AMI+GY ++ ++ + L LF M++ + D + +S
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFAS 544
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
ISA + GR++H G+SDD+S+ N L+ +Y G E F ++ +KD
Sbjct: 545 AISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKD 604
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW +++S + S ++A+ + M G + T S +SA A + N+ +G ++H
Sbjct: 605 NVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG 664
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +TG S ++N LI +Y+KC ID ISW S+I G + FE
Sbjct: 665 MIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFE 711
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
AL F M L++ PN VT V +LSAC+ +G
Sbjct: 712 ALKLFEDMKQLDVLPNHVTFVGVLSACSHVG 742
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 223/446 (50%), Gaps = 18/446 (4%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L ++ + MQ I ++ ++++ C D G +H+ V KT +V + +
Sbjct: 418 NLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSS 477
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ K G L HA +F ++ + D+ SW +I GY + F EAL+L++ M G+K
Sbjct: 478 VLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM-QDQGIK 536
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D F + C G+ L +G+++H GY D+ + NAL+++Y +CG + A
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAA 596
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + +D +SWN+++SG+ ++G + + L +F M + ++ + T S +SA+ + +
Sbjct: 597 FDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV 656
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++G+++HG + K G+ + V N LI +Y G + D +SW +MI+ Y
Sbjct: 657 RIGKQIHGMIRKTGYDSETEVSNALITLYAKCG-------------TIDDISWNSMITGY 703
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISY 433
+A++ ++ M+ +P+ +T VLSAC+ +G +D GI ++ L+
Sbjct: 704 SQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPK 763
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++D+ + + +A ++P + + W +++ + +++ + F +
Sbjct: 764 PEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNV-HKNIDIGEFAASHL 822
Query: 493 LNLKP-NSVTLVSILSACARIGALMC 517
L L+P +S T V + + A G C
Sbjct: 823 LELEPKDSATYVLVSNMYAVSGKWDC 848
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 258/501 (51%), Gaps = 8/501 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVV--SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
LV+L+R C R + +H + SK +H S+ L N + K D+ A +F +
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R+ FSW VLI G A+ G F + + M G+ PD + + +L+ C G+ ++
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQICIGLDSIEL 189
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G VH ++ G+ + V AL+ MY K ++ + VF+ M + + +SWNAMI+G+
Sbjct: 190 GNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTS 249
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N Y+ LF+ M V PD T V A ++ D +EV GY +++G + V
Sbjct: 250 NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV 309
Query: 336 CNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
LI M G+ +E +F+ + + W MIS Y S +KA+E + M
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDK 452
D T SV +A A L L LG K+H A+++GL ++Y+ I+N + + Y+KC ++
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
+VF+++ D+++ISWTS++ + +A+ F M + PN T S+L +CA
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ L G+++H ++G+ D + +AL+DMY +CG + A FN + D +W +
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAI 549
Query: 571 LTGYAERGQGALAEEFFRKMI 591
+ G+A+ G A + FR+M+
Sbjct: 550 IAGHAQHGIVDDALQLFRRMV 570
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 274/540 (50%), Gaps = 22/540 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS--VVSKTMSH 127
L NG ++ MQ I D+ A ++++C + G +H+ V+ SH
Sbjct: 146 LAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSH 205
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V A L+M+ K ++ ++ VF M + ++ SWN +I G+ + +A L+ RM
Sbjct: 206 TFV--STALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRM 263
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV PD TF V + G + D+ + KEV + + G +++ V ALI M KCG
Sbjct: 264 MG-EGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGS 322
Query: 248 LVRARLVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L AR +F+ + R WNAMISGY +G K L LF M + + D T SV
Sbjct: 323 LQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVF 382
Query: 306 SASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+A + LG++VH IK G + VS+ N + Y G+ E+ KVF+RME +D+
Sbjct: 383 NAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDL 442
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SWT++++ Y DKA+E + M AEG P++ T +SVL +CA L L+ G ++H +
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ GL I + L+DMY+KC C+ A +VF++I + + +SWT+II G + +A
Sbjct: 503 ICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDA 562
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN----- 538
L FR+M+ L ++PN+VT + +L AC+ G + G + ++ G +P
Sbjct: 563 LQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQY----FKLMKKTYGLVPEMEHYA 618
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++D+ R G + A +F S E + W LL G L E +K++ K
Sbjct: 619 CIVDLLSRVGHLNDAM-EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA 677
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 273/514 (53%), Gaps = 21/514 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSV 130
NG AL SM D+ AL + VR C G ++ H++ S+ S L V
Sbjct: 130 NGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIV 189
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA ++M+ K G + + +F ++ D+DL SW +I G+A+ GF EAL ++++M
Sbjct: 190 Q--NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVE 247
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P+ + F R CG V + G+++H I++ + D+ V +L MY + +L
Sbjct: 248 GSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDS 307
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR+ F + D +SWN++++ Y G + L+LF MR+ + PD +T+ ++ A
Sbjct: 308 ARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCA--C 365
Query: 311 VGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
VG + L GR +H Y++K+G DVSVCN L+ MY + VF ++ +DVV+W
Sbjct: 366 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWN 425
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++++ P++ ++ + ++ D I++ +VLSA A LG ++ ++H A +
Sbjct: 426 SILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKA 485
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
GL+ +++NTLID Y+KC +D A+ +F + +++V SW+S+I+G + EAL
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDL 545
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALL 541
F +M L ++PN VT + +L+AC+R+G + G + I G +P + ++
Sbjct: 546 FSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVPTREHCSCIV 601
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
D+ R G++ A N + E D+ W LL
Sbjct: 602 DLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 635
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 263/525 (50%), Gaps = 24/525 (4%)
Query: 101 LVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRL------GNAFLSMFVKFGDLGHAWYVF 153
LV C R +G +H +V+ + S +L GN ++M+ + A VF
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M R+ SW +I + + G +AL L+ M G D + +R C + D+
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML-RSGTAADQFALGSAVRACTELGDV 168
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G++VH H ++ +D+ V NAL+TMY K G + ++F+ + +D ISW ++I+G+
Sbjct: 169 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 228
Query: 274 FENGEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
+ G M+ L +F R+++V+ P+ S A VG + G ++HG IK
Sbjct: 229 AQQGFEMEALQVF---RKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRL 285
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D+ V L MY F N + F R+E+ D+VSW ++++ Y L +A+ +
Sbjct: 286 DRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G PD IT+ +L AC L G +H ++ GL + + N+L+ MY++C
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS---VTLVSIL 506
+ A++VFH+I D++V++W SI+ +N E L F +LN S ++L ++L
Sbjct: 406 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVL 463
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDV 564
SA A +G K++HA+A + G+ D L N L+D Y +CG + A F N RDV
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+W+ L+ GYA+ G A + F +M + + N +G+ C
Sbjct: 524 FSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTAC 568
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 10/390 (2%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVV------NALITMYVKCGDLVRAR 252
+ ++ C + L +G+ VH H++ + D + N LITMY +C AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP R+ +SW ++I+ + +NG L LF M D L S + A +G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR+VH + +K D+ V N L+ MY G ++G +F R++ KD++SW ++I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 373 CYEGSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ +A++ ++ M EGS P+E S AC +G+ + G ++H L+++ L
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + +L DMY++ K +D A F++I +++SW SI+ + EAL+ F +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L+P+ +T+ +L AC AL G+ IH++ +++G+ D + N+LL MY RC +
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
A + F+ ++DV WN +LT A+
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNH 436
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 12/317 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N + G L +AL M++ + D + L+ C + G +HS + K
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 383
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ LSM+ + DL A VF ++ D+D+ +WN ++ A+ +E L L
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 184 YQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ + +P D + VL + + K+VH + + G D + N LI
Sbjct: 444 FSLL---NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y KCG L A +F+ M RD SW+++I GY + G + L LF MR + + P+ +T
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVT 560
Query: 301 LSSVISASELVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
V++A VG G + Y I + G C+ ++ + G E
Sbjct: 561 FIGVLTACSRVGFVNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 358 RME-SKDVVSWTTMISC 373
+M D++ W T+++
Sbjct: 619 QMPFEPDIIMWKTLLAA 635
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 239/439 (54%), Gaps = 6/439 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+W+++I YA F ++AL LY +M GV+P YT+P VL+ C G+ + GK +H H
Sbjct: 70 AWDLMIRAYASNDFAEKALDLYYKML-NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
V + D+ V AL+ Y KCG+L A VFD MPKRD ++WNAMISG+ +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 283 LMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF+ MR + + P+ T+ + A G + G+ VHGY +MGFS+D+ V ++
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEG-SMPDE 399
+Y +VF K+ V+W+ MI Y E ++ + +QM+ + +M
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ I +L CA G+L G +H A++ G I + + NT+I Y+K + A F +
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
I K+VIS+ S+I G +N R E+ F +M + ++P+ TL+ +L+AC+ + AL G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
H + + G A + + NAL+DMY +CG++ A F++ ++RD+ +WN +L G+
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 578 GQGALAEEFFRKMIDSKGN 596
G G A F M ++ N
Sbjct: 489 GLGKEALSLFNSMQETGVN 507
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 247/502 (49%), Gaps = 17/502 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C R D+G +HS V+ + + + A + + K G+L A VF +M RD
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ +WN +I G++ + + L+ M + G+ P++ T + G L+ GK VH
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ R G+ D+ V ++ +Y K ++ AR VFD K++ ++W+AMI GY EN E +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN-EMI 287
Query: 281 K--GLMLFIMMRE---VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
K G + F M+ +V P + + ++ GD GR VH Y +K GF D++V
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTV 345
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N +I Y +G+ + + FS + KDV+S+ ++I+ + P+++ + M G
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD T+ VL+AC+ L L G H + G I N L+DMY+KC +D A
Sbjct: 406 RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKR 465
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
VF + ++++SW +++ G ++ EAL F M + P+ VTL++ILSAC+ G
Sbjct: 466 VFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGL 525
Query: 515 LMCGKEIHAHALR----IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
+ GK++ R + D + N + D+ R G + A++ N E D+
Sbjct: 526 VDEGKQLFNSMSRGDFNVIPRIDHY--NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
LL+ L E +KM
Sbjct: 584 TLLSACWTYKNAELGNEVSKKM 605
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 195/419 (46%), Gaps = 10/419 (2%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGM 258
F +L TC +L G+ +H H+++ + V+ L +Y C ++ AR VFD +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 259 --PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P+ + I+W+ MI Y N K L L+ M V P T V+ A +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE- 375
G+ +H +V F+ D+ VC L+ Y G E KVF M +D+V+W MIS +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
L D M +G P+ TI + A G L G +H R G + ++
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ ++D+Y+K KCI A VF KN ++W+++I G N EA F +M++N
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 496 KPNSVTLVS---ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
VT V+ IL CAR G L G+ +H +A++ G D + N ++ Y + G +
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A+ QF+ +DV ++N L+TG + + F +M S + + L+G+ C
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 274/520 (52%), Gaps = 6/520 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D + N+++ R + G LH + K + L + N L+ +V FG L A +
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M + S+ L G++++ F + + G + + + F +L+ +
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQF-QRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDL 119
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
VH +V + G++AD V ALI Y CG++ AR VFDG+ +D +SW M++
Sbjct: 120 ADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y EN + L+LF MR + P+ T+S+ + + + K+G+ VHG +K+ + D
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMME 391
+ V L+++Y G E ++ F M D++ W+ MIS Y S +A+E + +M +
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+ +P+ T ASVL ACA L L+LG ++H ++ GL S + ++N L+D+Y+KC I+
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
++++F +KN ++W +II+G +AL F M+ L+++P VT S+L A A
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ AL G++IH+ ++ D + N+L+DMY +CGR+ A F+ +++D +WN
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNA 479
Query: 570 LLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
L+ GY+ G G A F M +SK N +G+ C
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSAC 519
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 219/410 (53%), Gaps = 3/410 (0%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D L +H+ V K +G A + + G++ A VF + +D+ SW ++ Y
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ +++L L+ +M + G +P+ +T L++C G+ K GK VH ++ Y+ D
Sbjct: 181 AENYCHEDSLLLFCQM-RIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ V AL+ +Y K G++ A+ F+ MPK D I W+ MIS Y ++ + + L LF MR+
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299
Query: 292 V-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+V P+ T +SV+ A + LG ++H V+K+G +V V N L+ +Y G E
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
K+F+ K+ V+W T+I Y +KA+ + M P E+T +SVL A A
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L L+ G ++H L ++T ++AN+LIDMY+KC ID A F ++ ++ +SW +
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNA 479
Query: 471 IILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
+I G ++ EAL F M N KPN +T V +LSAC+ G L G+
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 192/373 (51%), Gaps = 2/373 (0%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C + G +H K + +G A L ++ K G++ A F +M DL
Sbjct: 212 LKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDL 271
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
W+++I YA++ EAL L+ RM V P+ +TF VL+ C + L G ++H
Sbjct: 272 IPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V++ G +++V V NAL+ +Y KCG++ + +F G +++ ++WN +I GY + G+ K
Sbjct: 332 CVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEK 391
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L LF M + + P +T SSV+ AS + + GR++H IK ++ D V N LI
Sbjct: 392 ALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLID 451
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G ++ F +M+ +D VSW +I Y L +A+ + MM+ S P+++T
Sbjct: 452 MYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLT 511
Query: 402 IASVLSACACLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
VLSAC+ G LD G + G+ I ++ + + D+A+++ +I
Sbjct: 512 FVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI 571
Query: 461 P-DKNVISWTSII 472
P +V+ W +++
Sbjct: 572 PFQPSVMVWRALL 584
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL +M L+I E +++R + G +HS+ KTM + +
Sbjct: 387 GDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVA 446
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + M+ K G + A F KM +D SWN LI GY+ G EAL+L+ M
Sbjct: 447 NSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFD-MMQQSNS 505
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRAR 252
KP+ TF VL C L +G+ +++ +G E ++ ++ + + G A
Sbjct: 506 KPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAV 565
Query: 253 LVFDGMPKRDRI-SWNAMISG 272
+ +P + + W A++
Sbjct: 566 KLIGEIPFQPSVMVWRALLGA 586
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 249/486 (51%), Gaps = 6/486 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+ E LH+ V L + + K GD+ HA VF M R+ F+WN +I G
Sbjct: 69 FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKG 128
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV----HVHVIRF 226
AG F EAL ++ M G V D +T+P V++ C + + +G++V +
Sbjct: 129 LVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASG 188
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
+V V AL+ M+ KCG L AR VF+ M RD +W AMI G +G +++ + LF
Sbjct: 189 NARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLF 248
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR D + ++VISA G+ ++G +HG +K G S D+ V N L+ MY
Sbjct: 249 NHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKC 308
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E + +F SKDVVSW+++I Y + + + +V + M + G P+ T+AS+L
Sbjct: 309 GCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASIL 368
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ L + G ++H ++R GL + + LID+YSK I A +F DK++
Sbjct: 369 PCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLA 428
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
W S++ G +N S A R + + LKP+ VT+VS+L C + L+ GKE+HA+
Sbjct: 429 IWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYV 488
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAE 584
++ + + NALLDMY +CG ++ A F ER+ +NIL++ + + A
Sbjct: 489 IKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQAL 548
Query: 585 EFFRKM 590
FF M
Sbjct: 549 SFFDLM 554
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 209/384 (54%), Gaps = 14/384 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L++C PD + + +H V+ G+ +V L+ Y K GD+ A VFDGMP+R+
Sbjct: 63 LQSC---PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS 119
Query: 264 ISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+WNA+I G + G + + L +F M+ + V D T VI A +G GR+V
Sbjct: 120 FAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWE 179
Query: 323 YV---IKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--SCYEG 376
V I G + +V V L+ M+ G +E VF M+ +D+ +WT MI + + G
Sbjct: 180 MVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSG 239
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ L + V+ + M +EG D + A+V+SAC G L +G LH A+++G I +
Sbjct: 240 NWL--EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYV 297
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+N L+DMY KC C++ A +F K+V+SW+S+I+G N ++ F +M+ L +
Sbjct: 298 SNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGI 357
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
PNS TL SIL + + + GKEIH ++R G+ F+ +AL+D+Y + G ++ A
Sbjct: 358 NPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAET 417
Query: 556 QF-NSNERDVSAWNILLTGYAERG 578
F + ++D++ WN ++ GYA G
Sbjct: 418 IFWLTLDKDLAIWNSMVAGYAVNG 441
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 230/467 (49%), Gaps = 7/467 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A + MF K G L A VF M RDL +W +IGG +G + E + L+ M G
Sbjct: 199 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR-SEGFG 257
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D V+ CG +L+ G +H ++ G D+ V NAL+ MY KCG + A +
Sbjct: 258 VDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCL 317
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F +D +SW+++I GY +NG + + LF M + ++P+ TL+S++ ++
Sbjct: 318 FWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLI 377
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G+E+H + I+ G V + LI +Y G E +F KD+ W +M++ Y
Sbjct: 378 RSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGY 437
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ D A ++++ G PD +T+ SVL C L G +LH ++ + S
Sbjct: 438 AVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVC 497
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ N L+DMY KC ++ A EVF + ++N +++ +I +N +AL FF M +
Sbjct: 498 SVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD 557
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKP 552
+ P+ VT V++LS C+ G + G ++ L ++ + + ++D+Y RCG++
Sbjct: 558 GIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDE 617
Query: 553 AWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
AW F SN E ++ LL + +AE +++ + N
Sbjct: 618 AWC-FMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPN 663
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 204/416 (49%), Gaps = 15/416 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ + + + M+ VD ++ C G LH K+ + + +
Sbjct: 238 SGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYV 297
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K G + A +F +D+ SW+ LI GY++ G + ++SL+ M + G
Sbjct: 298 SNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISL-G 356
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T +L + ++ GKE+H IR G E VV+ALI +Y K G + A
Sbjct: 357 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 416
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +D WN+M++GY NG ++++V + PD +T+ SV+
Sbjct: 417 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 476
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H YVIK + SV N L+ MY G E ++VF M ++ V++ +IS
Sbjct: 477 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILIS 536
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ D+A+ + +M+ +G PD++T ++LS C+ G +D G+ L+ + IS
Sbjct: 537 SFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNIS 596
Query: 433 -----YIIIANTLIDMYSKCKCIDKA---LEVFHQIPDKNVISWTSIILGLRLNNR 480
Y + ++D+YS+C +D+A + + P+ +V+ ++ R++NR
Sbjct: 597 PEKEHY----SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLG--GLLAACRVHNR 646
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +NG + A L +Q++ + D +V+++ LC +G LH+ V K
Sbjct: 431 NSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIK 490
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA L M+ K G L A VF M +R+ ++N+LI + K D+ALS
Sbjct: 491 YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSF 550
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMY 242
+ M G+ PD TF +L C + +G + H + + + + + ++ +Y
Sbjct: 551 FDLMK-RDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 609
Query: 243 VKCGDLVRARLVFDGMPKRDRI 264
+CG L A M + I
Sbjct: 610 SRCGKLDEAWCFMSNMAEEPEI 631
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 234/435 (53%), Gaps = 5/435 (1%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D F NV+I G+A AG + AL+ Y+ M G +PD +TFP V++ C + L+ G+
Sbjct: 71 DAFLHNVVIRGFADAGLPEAALAAYRAML-AAGARPDRFTFPVVVKCCARLGALEEGRAA 129
Query: 220 HVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H IR G ++V N+L+ Y K G + A VFDGMP RD ++WN+M+ GY NG
Sbjct: 130 HSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGL 189
Query: 279 YMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
L F M E L V D + + + ++A L GREVH YVI+ G DV V
Sbjct: 190 GALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGT 249
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G E +F+ M S+ VV+W MI Y + P++A + + M+AEG
Sbjct: 250 SLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQV 309
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +T ++L+ACA + G +H R+ + ++++ L++MYSK + + +F
Sbjct: 310 EVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIF 369
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
Q+ +K ++SW ++I EA+ F +++ L P+ T+ +++ A +G L
Sbjct: 370 GQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLR 429
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
+++H++ +R+ + + NA++ MY RCG + + F+ +DV +WN ++ GYA
Sbjct: 430 QCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYA 489
Query: 576 ERGQGALAEEFFRKM 590
GQG +A E F +M
Sbjct: 490 IHGQGKIALEMFSEM 504
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 224/459 (48%), Gaps = 7/459 (1%)
Query: 62 NPNSRLNELCLNGSL-----EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
+P++ L+ + + G E AL +M D +V+ C +EG
Sbjct: 69 SPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRA 128
Query: 117 LHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
HS + + V GN+ L+ + K G + A VF M RD+ +WN ++ GY G
Sbjct: 129 AHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNG 188
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
AL ++ M V+ D L C L +G+EVH +VIR G E DV V
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
+L+ MY KCG + A +F MP R ++WN MI GY NG + F+ M+
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQ 308
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
+ +T ++++A GR VHGYV + F V + L++MY G + E +
Sbjct: 309 VEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETI 368
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F +M +K +VSW MI+ Y + ++A+ + + + PD T+++V+ A LG L
Sbjct: 369 FGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLL 428
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
++H +R ++ N ++ MY++C + + ++F ++ K+VISW +II+G
Sbjct: 429 RQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGY 488
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++ + AL F +M N L+PN T VS+L+AC+ G
Sbjct: 489 AIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSG 527
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 199/419 (47%), Gaps = 4/419 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS ++ NG AL M E L + D ++ + C +G +H+ V
Sbjct: 178 NSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVI 237
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ V++G + L M+ K G + A +F M R + +WN +IGGYA G +EA
Sbjct: 238 RHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFD 297
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ +M G + +V T +L C G+ VH +V R + V + AL+ MY
Sbjct: 298 CFVQM-KAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K G + + +F M + +SWN MI+ Y Y + + LF+ + + PD+ T+S
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMS 416
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+V+ A L+G + R++H Y++++ + ++ V N ++ MY G+ K+F +M K
Sbjct: 417 AVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK 476
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKL 421
DV+SW T+I Y A+E + M++ G P+E T SVL+AC+ G D G I+
Sbjct: 477 DVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQF 536
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNN 479
+ + G+I I + D+ + + + L+ IP W S++ R N
Sbjct: 537 NLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRN 595
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 124/234 (52%), Gaps = 4/234 (1%)
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
S D +I + + LP+ A+ Y+ M A G+ PD T V+ CA LG L+ G
Sbjct: 69 SPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRA 128
Query: 421 LHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H A+R GL+ S + N+L+ Y+K + A VF +P +++++W S++ G N
Sbjct: 129 AHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNG 188
Query: 480 RSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
AL FR+M L ++ + V +++ L+AC ALM G+E+HA+ +R G+ D +
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+LLDMY +CG + A F + R V WN ++ GYA G A + F +M
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQM 302
>gi|255553939|ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542992|gb|EEF44528.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 824
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 248/469 (52%), Gaps = 16/469 (3%)
Query: 138 SMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVK 194
+M+ K G + +FG++ C D WN+L+ G+A + D + S + RM VK
Sbjct: 15 NMYAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVK 74
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL-VRARL 253
P T +L C + D+ GK H ++I+ G E V NAL++MY KCG + A
Sbjct: 75 PTSVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYA 134
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS-ASELVG 312
F + +D +SWNA+I+G+ EN L LF M + + P+ T+++V+ + L
Sbjct: 135 AFQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLAT 194
Query: 313 DEK--LGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D GRE+H Y+++ S DVSVCN L+ +L G +E E +F RME +D++SW
Sbjct: 195 DTAYLFGREIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNA 254
Query: 370 MISCYEGSVLPDKAVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS + + K++E +Q ++ E + PD +T+ S+L ACA L NL G ++H +R
Sbjct: 255 IISGFASNGEWSKSLELFQELLYLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRH 314
Query: 429 G-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L + N L+ Y+KC + A F IP +++ISW S++ + R+ +
Sbjct: 315 PYLYQDTSVGNALVSFYAKCNNLVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKL 374
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP---NALLDM 543
M ++P+S+T+++IL CA + + KE H ++LR G+ F P NA+LD
Sbjct: 375 LHWMHTEGIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDT 434
Query: 544 YVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y +C ++ A+ F S+ R++ +N +++GY G A F KM
Sbjct: 435 YAKCSNVEYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKM 483
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 261/539 (48%), Gaps = 52/539 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH-AWYVFGKMCDR 159
++ +C R G H + KT +GNA +SM+ K G + + A+ F + +
Sbjct: 83 ILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYAAFQSIYHK 142
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR---G 216
D+ SWN +I G+++ D AL L+ M +KP+ T VL + G
Sbjct: 143 DVVSWNAIIAGFSENKMVDSALRLFFFMLKTQ-IKPNHATIATVLPLLASLATDTAYLFG 201
Query: 217 KEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
+E+H +++R ADV V NAL++ ++ G + A L+F M RD ISWNA+ISG+
Sbjct: 202 REIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFAS 261
Query: 276 NGEYMKGLMLFIMMREVLV----DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-S 330
NGE+ K L LF +E+L +PD +TL S++ A + + K GRE+H YV++ +
Sbjct: 262 NGEWSKSLELF---QELLYLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLY 318
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D SV N L+ Y N F + S+D++SW +M+ + + + M
Sbjct: 319 QDTSVGNALVSFYAKCNNLVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWM 378
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY----------------- 433
EG PD ITI ++L CA + +D + H ++R GL+
Sbjct: 379 HTEGIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKC 438
Query: 434 ------------------IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
++ N++I Y C D A +F ++P ++ +W ++ G
Sbjct: 439 SNVEYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGC 498
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N+ +A FR++ +KP++VT++S+L +CA+ ++ K+ H + +R D
Sbjct: 499 AENDCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIRACFD-DA 557
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
L ALLD+Y +CG + A+ F+SN RD+ + ++ GYA G G A F M+D
Sbjct: 558 HLEGALLDLYAKCGDLGYAFKLFHSNPGRDLVVFTAMVGGYAMHGMGEEALRIFSDMLD 616
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 222/462 (48%), Gaps = 44/462 (9%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + NA LS + G + A +F +M RDL SWN +I G+A G + ++L L+Q + +
Sbjct: 218 VSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFASNGEWSKSLELFQELLY 277
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDL 248
+ +PD T +L C + +LK G+E+H +V+R Y D V NAL++ Y KC +L
Sbjct: 278 LESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNNL 337
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
V A F +P RD ISWN+M+ + G + L M + PD +T+ +++
Sbjct: 338 VAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHFC 397
Query: 309 ELVGDEKLGREVHGYVIKMGF-------------SDDVSVC------------------- 336
V +E H Y ++ G D + C
Sbjct: 398 ANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNVEYAFKVFQTLSDNRNL 457
Query: 337 ---NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
N +I Y++ G ++ +F +M + D+ +W M+ + PD+A ++ ++A
Sbjct: 458 VTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAENDCPDQAFSLFRELQAR 517
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G PD +TI S+L +CA ++ L + H +R + L+D+Y+KC + A
Sbjct: 518 GMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIR-ACFDDAHLEGALLDLYAKCGDLGYA 576
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
++FH P ++++ +T+++ G ++ EAL F M+ L +KP+ + + ++LSAC
Sbjct: 577 FKLFHSNPGRDLVVFTAMVGGYAMHGMGEEALRIFSDMLDLGIKPDHIVITAVLSACCHA 636
Query: 513 GALMCGKEIHAHALRIGV-----AFDGFLPNALLDMYVRCGR 549
G + G +I H++ G+ D + L+ +V C R
Sbjct: 637 GLVDEGLKIF-HSIEKGINEIQAGRDALSKSRFLNCFVGCQR 677
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 137/266 (51%), Gaps = 11/266 (4%)
Query: 342 MYLSFGNREEGEKVFSRME--SKDVVSWTTMISCYEGSVLPDKAVETY--QMMEAEGSMP 397
MY G + K+F + S D + W ++S + S + D ++ +M A P
Sbjct: 16 MYAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVKP 75
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID-KALEV 456
+T A +L CA + ++ +G H ++TG+ ++ ++ N L+ MY+KC + A
Sbjct: 76 TSVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYAA 135
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIG-- 513
F I K+V+SW +II G N AL +FF + +KPN T+ ++L A +
Sbjct: 136 FQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLATD 195
Query: 514 -ALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
A + G+EIH + LR + D + NALL ++ GR+K A F E RD+ +WN +
Sbjct: 196 TAYLFGREIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAI 255
Query: 571 LTGYAERGQGALAEEFFRKMIDSKGN 596
++G+A G+ + + E F++++ + N
Sbjct: 256 ISGFASNGEWSKSLELFQELLYLESN 281
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 274/569 (48%), Gaps = 28/569 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M D ++++C G+ +H VV +
Sbjct: 107 NSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVR 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +A L M+ K + VF + +++ SW+ +I G + AL
Sbjct: 167 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 226
Query: 184 YQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M V GV +Y VLR+C + +L+ G ++H H ++ + AD V A + MY
Sbjct: 227 FKEMQKVNAGVSQSIYA--SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ A+++FD +R S+NAMI+GY + K L+LF + + D ++LS
Sbjct: 285 AKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 344
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V A LV G +++ IK S DV V N I MY E +VF M +
Sbjct: 345 GVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 404
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + + + + M PDE T SVL AC G+L G+++H
Sbjct: 405 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIH 463
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKA----------------LEVFHQIPDKNV- 465
+++G+ S + +LIDMYSKC I++A +E ++ +K +
Sbjct: 464 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQ 523
Query: 466 ---ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+SW SII G + +S +A + F +MM + + P+ T ++L CA + + GK+I
Sbjct: 524 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 583
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
HA ++ + D ++ + L+DMY +CG + + F + RD WN ++ GYA G+G
Sbjct: 584 HAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 643
Query: 581 ALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + F +MI + K N + + R C
Sbjct: 644 EEAIQLFERMILENIKPNHVTFISILRAC 672
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 258/524 (49%), Gaps = 28/524 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L ALK+ MQ++N V + +++R C G LH+ K+ +
Sbjct: 217 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 276
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+ K ++ A +F K + + S+N +I GY++ +AL L+ R+ G
Sbjct: 277 RTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSG 335
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + V R C V L G +++ I+ DV V NA I MY KC L A
Sbjct: 336 LGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 395
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD +SWNA+I+ + +NG+ + L LF+ M ++PD T SV+ A G
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GG 454
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------- 358
G E+H ++K G + + SV LI MY G EE EK+ SR
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEEL 514
Query: 359 --MESKDV----VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
M +K + VSW ++IS Y + A + M G PD+ T A+VL CA L
Sbjct: 515 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 574
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ LG ++H ++ L S + I++TL+DMYSKC + + +F + ++ ++W ++I
Sbjct: 575 ASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 634
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + + EA+ F +M+L N+KPN VT +SIL ACA +G + G E + + ++
Sbjct: 635 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYG 693
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
D LP+ ++D+ + G++K A E D W LL
Sbjct: 694 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 249/482 (51%), Gaps = 26/482 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++ + K ++ A + F M RD+ SWN ++ GY + G +++ ++ M G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDM-GRAGT 134
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D TF +L+ C + D G ++H V+R G + DV +AL+ MY K V +
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF G+P+++ +SW+A+I+G +N L F M++V +SV+ + + +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG ++H + +K F+ D V + MY N ++ + +F + E+ + S+ MI+
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y KA+ + + + G DEI+++ V ACA + L G++++ LA+++ L
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLD 374
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ +AN IDMY KC+ + +A VF ++ ++ +SW +II N + +E L F M+
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ ++P+ T S+L AC G+L G EIH+ ++ G+A + + +L+DMY +CG ++
Sbjct: 435 SRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493
Query: 553 AWNQFNS---NERDVS-------------------AWNILLTGYAERGQGALAEEFFRKM 590
A + +S +VS +WN +++GY + Q A+ F +M
Sbjct: 494 A-EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552
Query: 591 ID 592
++
Sbjct: 553 ME 554
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 207/422 (49%), Gaps = 35/422 (8%)
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C L+ GK+ H H+I G+ V+N L+ +Y D V A +VFD MP RD +SW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 267 NAMI-------------------------------SGYFENGEYMKGLMLFIMMREVLVD 295
N MI SGY +NGE +K + +F+ M +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
D T + ++ + D LG ++HG V+++G DV + L+ MY E +V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 356 FSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F + K+ VSW+ +I+ C + ++L A++ ++ M+ + + ASVL +CA L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLS-LALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG +LH A+++ + I+ +DMY+KC + A +F + + N S+ ++I G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
F+AL+ F ++M + L + ++L + ACA + L G +I+ A++ ++ D
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLD 374
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NA +DMY +C + A+ F+ RD +WN ++ + + G+G F M+
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434
Query: 593 SK 594
S+
Sbjct: 435 SR 436
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 208/436 (47%), Gaps = 24/436 (5%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE +L + R C +G EGL ++ + K+ L V + NA + M+ K L A+ VF
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M RD SWN +I + + G E L L+ M ++PD +TF VL+ C G L
Sbjct: 399 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSVLKACTG-GSL 456
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS-------- 265
G E+H +++ G ++ V +LI MY KCG + A + +R +S
Sbjct: 457 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEK 516
Query: 266 ------------WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
WN++ISGY + MLF M E+ + PD T ++V+ +
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 576
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+++H VIK DV + + L+ MY G+ + +F + +D V+W MI
Sbjct: 577 AGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 636
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLIS 432
Y ++A++ ++ M E P+ +T S+L ACA +G +D G++ + R GL
Sbjct: 637 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 696
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + ++D+ K + +ALE+ ++P + + + W +++ ++ + E
Sbjct: 697 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAA 756
Query: 492 MLNLKPNSVTLVSILS 507
+L L P + ++LS
Sbjct: 757 LLRLDPQDSSAYTLLS 772
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 14/236 (5%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELC-----------LNGSLEQALKYLDSMQELNICVDED 96
Q N T K N RL E+C + E A M E+ I D+
Sbjct: 503 QRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 562
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
++ C G +H+ V K V + + + M+ K GDL + +F K
Sbjct: 563 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKS 622
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
RD +WN +I GYA G +EA+ L++RM + +KP+ TF +LR C + + +G
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKG 681
Query: 217 KEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMI 270
E + R +G + + + ++ + K G + RA + MP + D + W ++
Sbjct: 682 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 263/514 (51%), Gaps = 10/514 (1%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR---LGNAFLSMFVK 142
M + CV E ++L++ C E LH+++ T + + + + N LSM+ +
Sbjct: 1 MNKACFCVAEGHALSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYAR 60
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFDEALSLYQRMFWVGGVKPDVYTF 200
G L + VF KM R + S+N L+ Y++A AL LY +M G++P TF
Sbjct: 61 CGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQMV-TNGLRPSSTTF 119
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
+L+ + G +H + G D+ + +L+ MY CGDL A LVF M
Sbjct: 120 TSLLQASSLLEHWWFGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVD 178
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
RD ++WN++I GY +N + +G+ LFI M V P T V+++ + D + GR +
Sbjct: 179 RDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLI 238
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H +VI S D+ + N L+ MY + GN + ++FSRME+ D+VSW +MI+ Y +
Sbjct: 239 HAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDG 298
Query: 381 DKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+KA+ + Q+ E PD+ T A ++SA + G LH ++TG + + +T
Sbjct: 299 EKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGST 358
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPN 498
L+ MY K D A VF I K+V+ WT +I G A+ FF+ + + +
Sbjct: 359 LVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVD 418
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
L +++ACA + L G+ IH +A+++G + + +L+DMY + G ++ A+ F+
Sbjct: 419 DYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFS 478
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+E D+ WN +L GY+ G A + F +++
Sbjct: 479 QVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEIL 512
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 229/447 (51%), Gaps = 6/447 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + L+M+ GDL A VF M DRD +WN LI GY K +E + L+ +M VG
Sbjct: 152 LQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVG 211
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
P +T+ VL +C + D + G+ +H HVI D+ + NAL+ MY G++ A
Sbjct: 212 -FAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTA 270
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASEL 310
+F M D +SWN+MI+GY EN + K + LF+ ++E+ PD T + +ISA+ +
Sbjct: 271 YRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGV 330
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+ +H VIK GF V V + L+ MY + +VF + KDVV WT M
Sbjct: 331 FPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEM 390
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y A+ + M EG D+ ++ V++ACA L L G +H A++ G
Sbjct: 391 ITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGY 450
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ ++ +LIDMY+K ++ A VF Q+ + ++ W S++ G + EAL F +
Sbjct: 451 DVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEE 510
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++ L P+ VT +S+LSAC+ + GK + + IG+ + ++ ++ R
Sbjct: 511 ILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAAL 570
Query: 550 MKPAWNQFNSN---ERDVSAWNILLTG 573
++ A N + E ++ W LL+
Sbjct: 571 LEEAEEIINKSPYIEDNLELWRTLLSA 597
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 224/444 (50%), Gaps = 6/444 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +E+ + M + + ++ C + Y G +H+ V L + L
Sbjct: 194 NNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHL 253
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ G++ A+ +F +M + DL SWN +I GY++ ++A++L+ ++ +
Sbjct: 254 QNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCF 313
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KPD YT+ ++ G P GK +H VI+ G+E V V + L++MY K + A
Sbjct: 314 PKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAW 373
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF + +D + W MI+GY + + + + F M + D LS V++A +
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G +H Y +K+G+ ++SV LI MY G+ E VFS++ D+ W +M+
Sbjct: 434 VLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLG 493
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + ++A++ ++ + +G +PD++T S+LSAC+ ++ G L GLI
Sbjct: 494 GYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIP 553
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++ ++S+ +++A E+ ++ P + N+ W +++ + N++F+ I +
Sbjct: 554 GLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVI-NKNFKVGIHAAE 612
Query: 491 MMLNLKPN---SVTLVSILSACAR 511
+L LK ++ L+S L A AR
Sbjct: 613 EVLRLKAEDGPTLVLLSNLYAAAR 636
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 219/428 (51%), Gaps = 5/428 (1%)
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
LI Y K +A +Y M + D + P VL+ C +P G+EVH V++
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTD-TEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKN 153
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ DV V NALI MY + G L ARL+FD + +D +SW+ MI Y +G + L L
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYL 344
M + V P + + S+ + D KLG+ +H YV++ G V +C LI MY+
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
N +VF + ++SWT MI+ Y ++ V + M EG P+EIT+ S
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
++ C G L+LG LH +R G +++A IDMY KC + A VF K+
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
++ W+++I NN EA F M ++PN T+VS+L CA+ G+L GK IH+
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGAL 582
+ + G+ D L + +DMY CG + A F + +RD+S WN +++G+A G G
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513
Query: 583 AEEFFRKM 590
A E F +M
Sbjct: 514 ALELFEEM 521
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 253/525 (48%), Gaps = 23/525 (4%)
Query: 14 LRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLN 73
L+ PK +P + H + Q + + +S+ + + P + L N
Sbjct: 34 LKFTQSQPKPNVPHIQ-----QELHINLNETQQLHGHFIKTSSNCSYRVPLAALESYSSN 88
Query: 74 GSLEQ--------------ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
++ A K M+ + VD + ++++ C + G +H
Sbjct: 89 AAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHG 148
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V K H V + NA + M+ + G L A +F K+ ++D+ SW+ +I Y ++G DE
Sbjct: 149 FVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDE 208
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNA 237
AL L + M V VKP + + DLK GK +H +V+R G ++ V + A
Sbjct: 209 ALDLLRDMH-VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI MYVKC +L AR VFDG+ K ISW AMI+ Y +G+ LF+ M + P+
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+T+ S++ G +LG+ +H + ++ GF+ + + I MY G+ VF
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD 387
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+SKD++ W+ MIS Y + D+A + + M G P+E T+ S+L CA G+L++
Sbjct: 388 SFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H + G+ +I+ + +DMY+ C ID A +F + D+++ W ++I G +
Sbjct: 448 GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAM 507
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ AL F +M L + PN +T + L AC+ G L GK +
Sbjct: 508 HGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRL 552
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 6/345 (1%)
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
+I+ Y +N ++ MR + D + SV+ A L+ LG+EVHG+V+K G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F DV VCN LI MY G+ +F ++E+KDVVSW+TMI Y+ S L D+A++ +
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTLIDMYSK 446
M P EI + S+ A L +L LG +H MR G S + + LIDMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMMLNLKPNSVTLVSI 505
C+ + A VF + ++ISWT++I + NN + +F + + + PN +T++S+
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
+ C GAL GK +HA LR G L A +DMY +CG ++ A + F+S +D+
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
W+ +++ YA+ A + F M + N R ++ L C
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMIC 439
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +++A M I +E +V+L+ +C + G ++HS + K + L
Sbjct: 407 NNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMIL 466
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+F+ M+ GD+ A +F + DRD+ WN +I G+A G + AL L++ M + G
Sbjct: 467 KTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL-G 525
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P+ TF L C L+ GK + H V FG+ V+ ++ + + G L A
Sbjct: 526 VTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEA 585
Query: 252 RLVFDGMPKRDRIS 265
+ MP R I+
Sbjct: 586 HELIKSMPMRPNIA 599
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 249/486 (51%), Gaps = 6/486 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+ E LH+ V L + + K GD+ HA VF M R+ F+WN +I G
Sbjct: 64 FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKG 123
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV----HVHVIRF 226
AG F EAL ++ M G V D +T+P V++ C + + +G++V +
Sbjct: 124 LVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASG 183
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
+V V AL+ M+ KCG L AR VF+ M RD +W AMI G +G +++ + LF
Sbjct: 184 NARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLF 243
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR D + ++VISA G+ ++G +HG +K G S D+ V N L+ MY
Sbjct: 244 NHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKC 303
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E + +F SKDVVSW+++I Y + + + +V + M + G P+ T+AS+L
Sbjct: 304 GCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASIL 363
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ L + G ++H ++R GL + + LID+YSK I A +F DK++
Sbjct: 364 PCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLA 423
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
W S++ G +N S A R + + LKP+ VT+VS+L C + L+ GKE+HA+
Sbjct: 424 IWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYV 483
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAE 584
++ + + NALLDMY +CG ++ A F ER+ +NIL++ + + A
Sbjct: 484 IKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQAL 543
Query: 585 EFFRKM 590
FF M
Sbjct: 544 SFFDLM 549
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 209/384 (54%), Gaps = 14/384 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L++C PD + + +H V+ G+ +V L+ Y K GD+ A VFDGMP+R+
Sbjct: 58 LQSC---PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS 114
Query: 264 ISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+WNA+I G + G + + L +F M+ + V D T VI A +G GR+V
Sbjct: 115 FAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWE 174
Query: 323 YV---IKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--SCYEG 376
V I G + +V V L+ M+ G +E VF M+ +D+ +WT MI + + G
Sbjct: 175 MVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSG 234
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ L + V+ + M +EG D + A+V+SAC G L +G LH A+++G I +
Sbjct: 235 NWL--EVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYV 292
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+N L+DMY KC C++ A +F K+V+SW+S+I+G N ++ F +M+ L +
Sbjct: 293 SNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGI 352
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
PNS TL SIL + + + GKEIH ++R G+ F+ +AL+D+Y + G ++ A
Sbjct: 353 NPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAET 412
Query: 556 QF-NSNERDVSAWNILLTGYAERG 578
F + ++D++ WN ++ GYA G
Sbjct: 413 IFWLTLDKDLAIWNSMVAGYAVNG 436
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 230/467 (49%), Gaps = 7/467 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A + MF K G L A VF M RDL +W +IGG +G + E + L+ M G
Sbjct: 194 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR-SEGFG 252
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D V+ CG +L+ G +H ++ G D+ V NAL+ MY KCG + A +
Sbjct: 253 VDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCL 312
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F +D +SW+++I GY +NG + + LF M + ++P+ TL+S++ ++
Sbjct: 313 FWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLI 372
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G+E+H + I+ G V + LI +Y G E +F KD+ W +M++ Y
Sbjct: 373 RSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGY 432
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ D A ++++ G PD +T+ SVL C L G +LH ++ + S
Sbjct: 433 AVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVC 492
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ N L+DMY KC ++ A EVF + ++N +++ +I +N +AL FF M +
Sbjct: 493 SVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRD 552
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKP 552
+ P+ VT V++LS C+ G + G ++ L ++ + + ++D+Y RCG++
Sbjct: 553 GIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDE 612
Query: 553 AWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
AW F SN E ++ LL + +AE +++ + N
Sbjct: 613 AWC-FMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPN 658
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 204/416 (49%), Gaps = 15/416 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ + + + M+ VD ++ C G LH K+ + + +
Sbjct: 233 SGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYV 292
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ K G + A +F +D+ SW+ LI GY++ G + ++SL+ M + G
Sbjct: 293 SNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISL-G 351
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T +L + ++ GKE+H IR G E VV+ALI +Y K G + A
Sbjct: 352 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 411
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +D WN+M++GY NG ++++V + PD +T+ SV+
Sbjct: 412 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 471
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H YVIK + SV N L+ MY G E ++VF M ++ V++ +IS
Sbjct: 472 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILIS 531
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ D+A+ + +M+ +G PD++T ++LS C+ G +D G+ L+ + IS
Sbjct: 532 SFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNIS 591
Query: 433 -----YIIIANTLIDMYSKCKCIDKA---LEVFHQIPDKNVISWTSIILGLRLNNR 480
Y + ++D+YS+C +D+A + + P+ +V+ ++ R++NR
Sbjct: 592 PEKEHY----SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLG--GLLAACRVHNR 641
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +NG + A L +Q++ + D +V+++ LC +G LH+ V K
Sbjct: 426 NSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIK 485
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA L M+ K G L A VF M +R+ ++N+LI + K D+ALS
Sbjct: 486 YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSF 545
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMY 242
+ M G+ PD TF +L C + +G + H + + + + + ++ +Y
Sbjct: 546 FDLMK-RDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 604
Query: 243 VKCGDLVRARLVFDGMPKRDRI 264
+CG L A M + I
Sbjct: 605 SRCGKLDEAWCFMSNMAEEPEI 626
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 249/475 (52%), Gaps = 15/475 (3%)
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K +SH S N+ +S++ + D+ A +F +M +D+ SWN ++ G A EA
Sbjct: 206 KDISHNSFE--NSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFD 263
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L M +G V+PD T ++ C + L+ G+ VH +R D V N+LI MY
Sbjct: 264 LLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMY 323
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC D+ RA VF +P+RD +SWNAMISGY +NG + LF + + TL
Sbjct: 324 SKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLL 383
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES- 361
+++ + + + G +H + +K+GF+++ N L+ MY++ G+ FS +++
Sbjct: 384 AILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL---VACFSLLQTV 440
Query: 362 ---KDVVSW-TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLD 416
D+V W T M C + + A++ + +M + + D + + +V+SAC L L
Sbjct: 441 SAAADIVCWNTVMAGCTQNGHFWE-ALKAFNLMRQDPDVCHDSVALFNVISACGNLELLF 499
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G LH LA++T + S I + N LI MY +C I+ A +F ++N+ SW +I
Sbjct: 500 AGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFS 559
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N AL F + +PN +T+V ILSAC ++G L GK+IH H +R + + F+
Sbjct: 560 QNKDGRRALELF--CHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFV 617
Query: 537 PNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL DMY CGR+ A+ F S+ ER V+AWN +++ + G A E F +M
Sbjct: 618 SAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM 672
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 240/465 (51%), Gaps = 15/465 (3%)
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++HL + L+ + + D +W +F ++ RD+ WN +I + F A++L
Sbjct: 3 ALAHLPT--STSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + GV D T V+ + +L +G+ +H + G +D + NALI MY
Sbjct: 61 FVELMG-EGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYA 119
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+L + VF GM RD ISWN+M+ G N K L F M D ++L+
Sbjct: 120 KCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTC 179
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SAS L+G+ G+ +HG+ IK+G+ D S N LI +Y + + E +F M+
Sbjct: 180 AVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKY 239
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSM-PDEITIASVLSACACLGNLDL 417
KD+VSW M+ +G L + E + + M+ G + PD +T+ ++ CA L L
Sbjct: 240 KDIVSWNAML---DGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLRE 296
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H L +R + + N+LIDMYSKCK + +A VF IP+++++SW ++I G
Sbjct: 297 GRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQ 356
Query: 478 NNRSFEALIFFRKMMLNLKPNSV-TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N S EA FR+++ + S+ TL++IL +C L G+ IH L++G A +
Sbjct: 357 NGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLA 416
Query: 537 PNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLTGYAERGQ 579
N+L+ MY+ CG + ++ Q S D+ WN ++ G + G
Sbjct: 417 VNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGH 461
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 264/536 (49%), Gaps = 25/536 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDAL--VNLVRLCEWKRGYDEGLYLHSVV 121
N+ L+ L LN + +A L MQ L CV D++ V ++ LC EG +H +
Sbjct: 246 NAMLDGLALNQRIWEAFDLLHEMQLLG-CVQPDSVTVVIIIPLCAELMLLREGRAVHGLT 304
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ L + N+ + M+ K D+ A +VF + +RDL SWN +I GY++ G EA
Sbjct: 305 LRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQ 364
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L++++ + + T +L +C L+ G+ +H ++ G+ + VN+L+ M
Sbjct: 365 HLFRQLL-QSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLM 423
Query: 242 YVKCGDLVRA-RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF-- 298
Y+ CGDLV L+ D + WN +++G +NG + + L F +MR+ DPD
Sbjct: 424 YINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQ---DPDVCH 480
Query: 299 --MTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ L +VISA G+ +L G +HG +K D+ V N LI MY G E
Sbjct: 481 DSVALFNVISA---CGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENAR 537
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F ++++ SW MIS + + +A+E + +E E P+EITI +LSAC LG
Sbjct: 538 IIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFE---PNEITIVGILSACTQLG 594
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G ++H +R+ L ++ L DMYS C +D A ++F P+++V +W S+I
Sbjct: 595 VLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMIS 654
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVA 531
++ +A+ F +M +P T +S+LSAC+ G + G +++ L + V
Sbjct: 655 AFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVE 714
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEE 585
D ++DM R GR+ A+ + + W LL+ + G + E
Sbjct: 715 ADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGRE 770
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 200/372 (53%), Gaps = 5/372 (1%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G A + +L+T Y + D + +FD + RD I WNAMI+ EN + + LF
Sbjct: 2 GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLF 61
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+ + V D TL V+SAS +G+ GR +HG K G D +CN LI MY
Sbjct: 62 VELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKC 121
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E VF ME +D++SW +M+ + P K++ ++ M D +++ +
Sbjct: 122 GELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAV 181
Query: 407 SACACLGNLDLGIKLHQLAMRTGL--ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
SA A LG L G +H ++ G IS+ N+LI +YS+C+ I A +F ++ K+
Sbjct: 182 SASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKD 241
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIH 522
++SW +++ GL LN R +EA +M L ++P+SVT+V I+ CA + L G+ +H
Sbjct: 242 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVH 301
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
LR + D + N+L+DMY +C +K A + F + ERD+ +WN +++GY++ G
Sbjct: 302 GLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSR 361
Query: 582 LAEEFFRKMIDS 593
A+ FR+++ S
Sbjct: 362 EAQHLFRQLLQS 373
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 227/420 (54%), Gaps = 2/420 (0%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
E+ +NL+R + +G +H+ K ++ L N L+M++K DL A +F
Sbjct: 5 EELYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFD 64
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+M +R++ SW+ ++ G G +ALSL+ M G VKP+ +TF L+ C ++
Sbjct: 65 EMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVT 124
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+ +++ V+R G E +V ++NA +T V+ G L A +F+ P RD ++WN M+ GY
Sbjct: 125 QAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYL 184
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
E + M RE V PD T +S ++ + K+G +VH +++ G+ DD+
Sbjct: 185 EFSSEQIPVFWRYMNREG-VKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDIC 243
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L+ MYL EEG K F + KDV SWT M P A+ M+ G
Sbjct: 244 VGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMG 303
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P++ T+A+ L+ACACL +++ G + H L ++ G + + N L+DMY+KC C+D A
Sbjct: 304 VKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAW 363
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
VF ++V+SWT++I+ N + EAL F +M +++PN +T + +L AC++ G
Sbjct: 364 TVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGG 423
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 205/394 (52%), Gaps = 4/394 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LR+ + +G +H + I+ + + N L+ MY+KC DL A +FD MP+R+
Sbjct: 11 LLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERN 70
Query: 263 RISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+SW+++++G NG L LF M RE V P+ T S + A L + +++
Sbjct: 71 VVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIY 130
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
V++ G +V + N + + G E ++F +D V+W TM+ Y +
Sbjct: 131 SLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYL-EFSSE 189
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ ++ M EG PDE T AS L+ A + +L +G+++H +R+G I + N+L+
Sbjct: 190 QIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLV 249
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY K + +++ + F +IP K+V SWT + G AL KM + +KPN
Sbjct: 250 DMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKF 309
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
TL + L+ACA + ++ GK+ H +++G D + NALLDMY +CG M AW F S
Sbjct: 310 TLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRST 369
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
N R V +W ++ A+ GQ A + F +M ++
Sbjct: 370 NSRSVVSWTTMIMACAQNGQPGEALQIFDEMKET 403
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 5/409 (1%)
Query: 73 NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG AL M +E + +E V+ ++ C + ++S+V ++ +V
Sbjct: 84 NGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVF 143
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NAFL+ V+ G L A +F RD +WN ++GGY + F E + ++ R
Sbjct: 144 LLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNRE 201
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVKPD +TF L + LK G +VH ++R GY D+ V N+L+ MY+K L
Sbjct: 202 GVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEG 261
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
FD +P +D SW M G + GE L + M+++ V P+ TL++ ++A +
Sbjct: 262 FKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACL 321
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G++ HG IK+G DV V N L+ MY G + VF S+ VVSWTTMI
Sbjct: 322 ASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMI 381
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
+ P +A++ + M+ P+ IT VL AC+ G +D G K L + G+
Sbjct: 382 MACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGI 441
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
I ++ + + I +A E+ ++P V W +++ +++
Sbjct: 442 IPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIH 490
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
+++L + A+ + G IHA+ ++ + F FL N LL+MY++C + A F+ E
Sbjct: 9 INLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPE 68
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+V +W+ ++TG G + A F M
Sbjct: 69 RNVVSWSSVMTGCVHNGGASDALSLFSCM 97
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 295/591 (49%), Gaps = 29/591 (4%)
Query: 18 LRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLE 77
L+N +IP SF PK+ H S S + +N + + LC G+L
Sbjct: 23 LQNINNKIPFHSFT-PPKSSHLFSPIISSHK----------KQQNASKHFHNLCNTGNLN 71
Query: 78 QALKYLDSMQELNICVDED-----ALVNLV-RLCEWKRGYDEGLYLHSVVSKTMSHLS-- 129
QA +L S LN V L+ L+ +LC + + G +H+ +S T H
Sbjct: 72 QAFNFLQS--NLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFIS-TSPHFQND 128
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V L ++M+ + VF ++LF WN L+ GY + F +A+ ++ M
Sbjct: 129 VVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMIS 188
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ PD +T PCV++ C GV D++ G+ VH ++ +DV V NALI MY K G +
Sbjct: 189 LTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVE 248
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISA 307
A VFD MP+R+ +SWN+++ ENG + + LF ++ + + PD T+ +VI
Sbjct: 249 SAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPL 308
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G+ +LG HG +K+G ++ V + L+ MY G E +F E K+V+SW
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISW 367
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAM 426
+MI Y A E + M+ E + +E+T+ +VL C ++H A+
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYAL 427
Query: 427 RTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
R G I S ++AN + Y+KC + A VF + K V SW ++I G N +AL
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ M L+P+ T+ S+LSACAR+ +L CGKEIH LR G D F+ +L+ +Y
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547
Query: 545 VRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
V+CG++ A F N E+++ WN ++ G+++ A + F +M+ SK
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSK 598
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 258/504 (51%), Gaps = 6/504 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +V ++ LC + G+ H + K +++ ++ L M+ K G L A +F
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++++ SWN +IGGY+K F A L ++M VK + T VL C
Sbjct: 358 DTN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQF 416
Query: 214 KRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ KE+H + +R G+ ++D V NA + Y KCG L A VF GM + SWNA+I G
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGG 476
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ +NG K L L+++MR ++PD T++S++SA + G+E+HG +++ GF D
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+C L+ +Y+ G + F ME K++V W TMI+ + + P A++ + M +
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PDEI+I L AC+ + L LG +LH A+++ L + + +LIDMY+KC C+++
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQ 656
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
+ +F ++ K ++W +I G ++ +A+ F+ M +P+SVT +++L+AC
Sbjct: 657 SQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNH 716
Query: 512 IGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWN 568
G + G E + G+ ++DM R GR+ A N ++ D W+
Sbjct: 717 AGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWS 776
Query: 569 ILLTGYAERGQGALAEEFFRKMID 592
LL+ + E+ K+++
Sbjct: 777 SLLSSCRNYRDLDIGEKVANKLLE 800
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 272/526 (51%), Gaps = 15/526 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY--DEGLYLHSVVSKTMSHLSVR 131
G E+A+ M L + + + +L+ C + GY DEG +H V KT V
Sbjct: 174 GLYEEAVGLFCQMWGLGVEPNGFMVASLITACS-RSGYMADEGFQVHGFVVKTGILGDVY 232
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + + G + +A +F +M D ++ SW L+ GY+ +G E L++YQRM
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ-E 291
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV + TF V +CG + D G +V H+I++G+E V V N+LI+M+ + A
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD M + D ISWNAMIS Y +G + L F MR + + + TLSS++S V
Sbjct: 352 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 411
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ K GR +HG V+K+G +V +CN L+ +Y G E+ E VF M +D++SW +M+
Sbjct: 412 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 471
Query: 372 SCY--EGSVLPDKAV--ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+CY +G L + E QM G + + +T AS L+AC+ L +H L +
Sbjct: 472 ACYVQDGKCLDGLKILAELLQM----GKVMNHVTFASALAACSNPECLIESKIVHALIIV 527
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G ++I+ N L+ MY K + +A +V +P + ++W ++I G N EA+
Sbjct: 528 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 587
Query: 488 FRKMMLNLKP-NSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYV 545
++ + P N +T+VS+L AC+ L+ G IHAH + G D ++ N+L+ MY
Sbjct: 588 YKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYA 647
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + + F+ + WN ++ A G G A + F +M
Sbjct: 648 KCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 693
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 266/504 (52%), Gaps = 16/504 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH+ +L + N ++M+ KFG++ HA YVF +M R+ SW+ ++ GY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA 230
G ++EA+ L+ +M W GV+P+ + ++ C G + D G +VH V++ G
Sbjct: 173 VGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMAD--EGFQVHGFVVKTGILG 229
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V AL+ Y G + A+ +F+ MP + +SW +++ GY ++G + L ++ MR
Sbjct: 230 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 289
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ V + T ++V S+ L+ D+ LG +V G++I+ GF D VSV N LI M+ SF + E
Sbjct: 290 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E VF M D++SW MIS Y L +++ + M + + T++S+LS C+
Sbjct: 350 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 409
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ NL G +H L ++ GL S + I NTL+ +YS+ + A VF + ++++ISW S
Sbjct: 410 SVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 469
Query: 471 IILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
++ + + + L I + + N VT S L+AC+ L+ K + HAL I
Sbjct: 470 MMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV--HALIIV 527
Query: 530 VAFDGFL--PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
F FL NAL+ MY + G M A + + D WN L+ G+AE + A +
Sbjct: 528 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 587
Query: 587 FRKMIDSKG---NWRKLMGLFRKC 607
+ K+I KG N+ ++ + C
Sbjct: 588 Y-KLIREKGIPANYITMVSVLGAC 610
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 221/451 (49%), Gaps = 10/451 (2%)
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+W RG +H +V K +V + N L+++ + G A VF M +RDL SWN
Sbjct: 415 KWGRG------IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 468
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
++ Y + G + L + + +G V V TF L C L K VH +I
Sbjct: 469 SMMACYVQDGKCLDGLKILAELLQMGKVMNHV-TFASALAACSNPECLIESKIVHALIIV 527
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
G+ + V NAL+TMY K G ++ A+ V MP+ DR++WNA+I G+ EN E + +
Sbjct: 528 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 587
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ ++RE + +++T+ SV+ A D K G +H +++ GF D V N LI MY
Sbjct: 588 YKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYA 647
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ +F + +K ++W M++ ++A++ + M G D+ + +
Sbjct: 648 KCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSG 707
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L+A A L L+ G +LH L ++ G S + + N +DMY KC + L++ Q +++
Sbjct: 708 GLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRS 767
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW +I + +A F +M+ L KP+ VT VS+LSAC G + G +
Sbjct: 768 RLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYD 827
Query: 524 HALRIGVAFDGFLPNA-LLDMYVRCGRMKPA 553
R F G ++D+ R GR+ A
Sbjct: 828 SMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 858
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 218/447 (48%), Gaps = 11/447 (2%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
CL+G LK L + ++ ++ + + C E +H+++ H +
Sbjct: 480 CLDG-----LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 534
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+GNA ++M+ K G + A V M D +WN LIGG+A+ +EA+ Y ++
Sbjct: 535 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY-KLIRE 593
Query: 191 GGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+ + T VL C DL K G +H H++ G+E+D V N+LITMY KCGDL
Sbjct: 594 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 653
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ +FDG+ + I+WNAM++ +G + L +F MR V V+ D + S ++A+
Sbjct: 654 SSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATA 713
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G+++HG VIK+GF D+ V N + MY G + K+ + ++ +SW
Sbjct: 714 NLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNI 773
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT- 428
+IS + KA ET+ M G PD +T S+LSAC G +D G+ + R
Sbjct: 774 LISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREF 833
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
G+ I +ID+ + + A ++P N ++W S++ R++ + E
Sbjct: 834 GVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHG-NLELARK 892
Query: 488 FRKMMLNLKPNSVTLVSILS-ACARIG 513
+ +L L P+ + + S CA G
Sbjct: 893 TAEHLLELDPSDDSAYVLYSNVCATSG 919
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 263/532 (49%), Gaps = 17/532 (3%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
CLN + +K D + + D+ ++ C + D G +H + K S +V
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV 177
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L L M+ K G++ A VF + R++ W +I GY K +E L L+ RM
Sbjct: 178 VL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RE 235
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V + YT+ ++ C + L +GK H +++ G E +V +L+ MYVKCGD+
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ D + W AMI GY NG + L LF M+ V + P+ +T++SV+S L
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + +LGR VHG IK+G D +V N L+ MY + + VF KD+V+W ++
Sbjct: 356 IENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + +A+ + M +E P+ +T+AS+ SACA LG+L +G LH +++ G
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 431 I--SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ S + + L+D Y+KC A +F I +KN I+W+++I G + +L F
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLD 542
+M+ KPN T SILSAC G + GK+ + + F P+ ++D
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD----YNFTPSTKHYTCMVD 590
Query: 543 MYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
M R G ++ A + + DV + L G + L E +KM+D
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 252/496 (50%), Gaps = 9/496 (1%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V++ + + +S++ FG A VF ++ + D + W V++ Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
E + LY + G + D F L+ C + DL GK++H +++ +V V+
Sbjct: 124 VEVVKLYD-LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTG 181
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY KCG++ A VF+ + R+ + W +MI+GY +N +GL+LF MRE V +
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T ++I A + G+ HG ++K G + L+ MY+ G+ +VF+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
D+V WT MI Y + ++A+ +Q M+ P+ +TIASVLS C + NL+L
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H L+++ G+ +AN L+ MY+KC A VF +K++++W SII G
Sbjct: 362 GRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG--VAFDG 534
N EAL F +M ++ PN VT+ S+ SACA +G+L G +HA+++++G +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI-- 591
+ ALLD Y +CG + A F++ E++ W+ ++ GY ++G + E F +M+
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 592 DSKGNWRKLMGLFRKC 607
K N + C
Sbjct: 541 QQKPNESTFTSILSAC 556
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 228/448 (50%), Gaps = 20/448 (4%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
N+LC E+ L + M+E N+ +E L+ C +G + H + K+
Sbjct: 220 NDLC-----EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
LS L + L M+VK GD+ +A VF + DL W +I GY G +EALSL+Q+M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V +KP+ T VL CG + +L+ G+ VH I+ G D +V NAL+ MY KC
Sbjct: 335 KGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQ 392
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
A+ VF+ ++D ++WN++ISG+ +NG + L LF M V P+ +T++S+ SA
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 308 SELVGDEKLGREVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+G +G +H Y +K+GF S V V L+ Y G+ + +F +E K+ +
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W+ MI Y ++E ++ M + P+E T S+LSAC G ++ G K
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 426 MRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ Y +T ++DM ++ +++AL++ ++P +V + + + G +++
Sbjct: 573 YK----DYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILS 507
R F+ K ML+L P+ + ++S
Sbjct: 629 R-FDLGEIVIKKMLDLHPDDASYYVLVS 655
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 152/316 (48%), Gaps = 12/316 (3%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P F+ LS + L R+ HG + G D+S+ L+ +Y FG ++ V
Sbjct: 46 PCFLLLSKCTNIDSL-------RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLV 98
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F ++ D W M+ CY + + V+ Y ++ G D+I + L AC L +L
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
D G K+H ++ +++ L+DMY+KC I A +VF+ I +NV+ WTS+I G
Sbjct: 159 DNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGY 217
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N+ E L+ F +M N+ N T +++ AC ++ AL GK H ++ G+
Sbjct: 218 VKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--I 591
L +LLDMYV+CG + A FN + D+ W ++ GY G A F+KM +
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 592 DSKGNWRKLMGLFRKC 607
+ K N + + C
Sbjct: 338 EIKPNCVTIASVLSGC 353
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 275/547 (50%), Gaps = 11/547 (2%)
Query: 70 LCLNGSLEQALKYLD-SMQELNIC-VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT--M 125
L N + +AL++LD + L + +D A ++ C + G +H+ V + +
Sbjct: 18 LSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGV 77
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ L N L+ + K G L A +F M +R+ S+ L+ GYA G F+EAL L++
Sbjct: 78 AQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFR 137
Query: 186 RMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
R+ G V V T + P L G +H + G++ + V ALI Y
Sbjct: 138 RLQREGHEVNHFVLTTILKVLVTMDAPGLACG--IHACACKLGHDRNAFVGTALIDAYSL 195
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CG + AR VFDG+ +D ++W AM+S Y EN L F MR P+ L+S
Sbjct: 196 CGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSA 255
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A+ + LG+ +HG +K + + V L+ MY G+ E+ +F + DV
Sbjct: 256 LKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDV 315
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+ W+ +IS Y S ++A E + M +P+E +++ VL ACA + L+LG ++H L
Sbjct: 316 ILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNL 375
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A++ G S + + N L+DMY+KC+ ++ +LE+F + D N +SW +II+G + + +A
Sbjct: 376 AIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDA 435
Query: 485 LIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F +M ++ VT S+L ACA ++ +IH+ + D + N+L+D
Sbjct: 436 LSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDT 495
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKL 600
Y +CG ++ A F S E DV +WN +++ YA G+ A E F +M D K N
Sbjct: 496 YAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTF 555
Query: 601 MGLFRKC 607
+ L C
Sbjct: 556 VSLLSVC 562
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 2/443 (0%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
L G E+AL+ +Q V+ L ++++ +H+ K +
Sbjct: 125 LRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAF 184
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + + G + HA VF + +D +W ++ Y++ + AL+ + +M +
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM-RMT 243
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G KP+ + L+ + GK +H ++ Y+ + V AL+ MY KCGD+ A
Sbjct: 244 GFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDA 303
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ +P D I W+ +IS Y ++ + + +F+ M V P+ +LS V+ A +
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+LG ++H IK+G+ ++ V N L+ MY N E ++FS ++ + VSW T+I
Sbjct: 364 AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTII 423
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y S + A+ + M A + ++T +SVL ACA ++ +++H L ++
Sbjct: 424 VGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFN 483
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I+ N+LID Y+KC I AL+VF I + +V+SW SII L+ R+ AL F +M
Sbjct: 484 NDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRM 543
Query: 492 -MLNLKPNSVTLVSILSACARIG 513
++K N VT VS+LS C G
Sbjct: 544 NKSDIKANDVTFVSLLSVCGSTG 566
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 1/308 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H KT+ +G A L M+ K GD+ A +F + D+ W+ LI YA+
Sbjct: 268 GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ ++A ++ RM V P+ ++ VL+ C + L+ G+++H I+ GYE+++
Sbjct: 328 SCQNEQAFEMFLRMMR-SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELF 386
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY KC ++ + +F + + +SWN +I GY ++G L +F MR
Sbjct: 387 VGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAH 446
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ +T SSV+ A K ++H + K F++D VCN LI Y G +
Sbjct: 447 MLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDAL 506
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + DVVSW ++IS Y A+E + M +++T S+LS C G
Sbjct: 507 KVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTG 566
Query: 414 NLDLGIKL 421
++ G+ L
Sbjct: 567 LVNQGLWL 574
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C +G E AL M+ ++ + +++R C + +HS++ K+ +
Sbjct: 427 CQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDT 486
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ + + K G + A VF + + D+ SWN +I YA G AL L+ RM
Sbjct: 487 IVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMN-K 545
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRG 216
+K + TF +L CG + +G
Sbjct: 546 SDIKANDVTFVSLLSVCGSTGLVNQG 571
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 234/452 (51%), Gaps = 6/452 (1%)
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+W+ D +H++V + V + + ++ + F + A VF +M +RD+ SW
Sbjct: 135 KWRSNGDA---IHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWT 191
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I A+ G +D+ L + M G+ P+ T +L CG + G+ V+ V +
Sbjct: 192 SMISACAQCGHWDKVLKMLSEM-QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
FG EADVD+ NALI+MY KCG L A F MP R SWN +I G+ +N E+ + L +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M V PD +TL SV+SA +G+ + G VH Y+ G D + N LI MY
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ E+VF M KDVVSWT M+ Y A ++ M+ + E+ + S+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
LSAC+ LG LD G ++H + + + + L+DMY+KC CID A E+F ++ K
Sbjct: 431 LSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQT 490
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW ++I GL N EA+ F +M + + KP+ +TL ++L ACA +G + G
Sbjct: 491 LSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY 550
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+GV D ++D+ R G + A++
Sbjct: 551 LMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFH 582
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 238/463 (51%), Gaps = 6/463 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L+ D+ +A VF M + F WN +I GY+ +AL++++ M GV
Sbjct: 57 ALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMR-RRGVS 115
Query: 195 PDVYTFPCVLRTCGGVPDLK---RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD YT V+ LK G +H V R G+ +DV V++ L+ Y + A
Sbjct: 116 PDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEA 175
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M +RD +SW +MIS + G + K L + M+ + P+ +T+ S++SA
Sbjct: 176 SKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQT 235
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GR V+ V K G DV + N LI MY G + + F M ++ SW T+I
Sbjct: 236 QAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLI 295
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + +A+ ++ M G PD IT+ SVLSACA LG L G+ +H G+
Sbjct: 296 DGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGIC 355
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I+ N+LI+MY+KC + A VF + K+V+SWT ++ G ++ A F +M
Sbjct: 356 CDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEM 415
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + + + LVS+LSAC+++GAL G+EIH++ + VA D L +AL+DMY +CG +
Sbjct: 416 KIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCI 475
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F + +WN ++ G A G G A E F +M++
Sbjct: 476 DTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLE 518
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 209/381 (54%), Gaps = 8/381 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCG---DLVRARLVFDGMPKRDRISWNAMISGYF 274
E+H ++R +D V LI + D+ AR VFDGM + + WN MI GY
Sbjct: 35 ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYS 94
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSD 331
L +F MR V PD T+++V+SAS K G +H V ++GF+
Sbjct: 95 SCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTS 154
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
DV V + L+ Y +F + +E KVF M +DVVSWT+MIS DK ++ M+
Sbjct: 155 DVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
AEG +P+++TI S+LSAC +D G ++ + G+ + + I N LI MY+KC C+
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
ALE F +P + SW ++I G N+ EAL F +M+L+ + P+ +TLVS+LSACA
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++G L G +H++ G+ D L N+L++MY +CG M A F + ++DV +W +
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ GY + Q +A F +M
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEM 415
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 224/440 (50%), Gaps = 7/440 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ LK L MQ I ++ +++L+ C + DEG ++++ V K V +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K G L A F M R SWN LI G+ + EAL +++ M + GV
Sbjct: 261 NALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML-LHGV 319
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T VL C + +L++G VH ++ G D + N+LI MY KCGD+ A
Sbjct: 320 TPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAER 379
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M K+D +SW M+ GY + ++ LF M+ V M L S++SA +G
Sbjct: 380 VFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGA 439
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H Y+ +M + D+ + + L+ MY G + ++F +M+ K +SW MI
Sbjct: 440 LDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG 499
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +AVE + QM+E + PD IT+ +VL ACA +G +D G++ L G++
Sbjct: 500 LASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVP 559
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++D+ + +D+A ++P + N + W S++ R+++R + +
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHR-MDLGKVIGQH 618
Query: 492 MLNLKPNSV---TLVSILSA 508
++N+ PN V LVS L A
Sbjct: 619 IVNVAPNDVGVHVLVSNLHA 638
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 272/526 (51%), Gaps = 28/526 (5%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L ++Q LN + V ++ C + ++G LHS++ S + ++M+ K
Sbjct: 2 LSAIQMLN---NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSK 58
Query: 143 FGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
G +G A VF C +R++F++N +I G+ G + Y++M + GV PD YTFP
Sbjct: 59 CGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKM-RLEGVMPDKYTFP 117
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
CV+RTC V ++K+ +H +++ G E DV V +AL+ Y+K G + A+ VF + R
Sbjct: 118 CVVRTCCEVMEVKK---IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR 174
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
D + WNAMI+GY + G + L +F M V P T++ ++S GD G+ VH
Sbjct: 175 DVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVH 234
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G V+KMG+ VSV N LI MY + + +F + KD+ SW ++IS +E D
Sbjct: 235 GIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHD 294
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL--------ISY 433
+ + M G +PD +TI +VL AC+ L L G ++H + GL +
Sbjct: 295 GTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDN 354
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++++N ++DMY+KC ++ AL++F + K+V SW +I+G ++ + EAL F +M
Sbjct: 355 LLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCE 414
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRC 547
KPN VTLV +LSAC G + G+ A ++ F G +P ++DM R
Sbjct: 415 AEFKPNEVTLVGVLSACNHAGFVSHGRLFLA---QMESTF-GVIPTIEHYTCVIDMLGRA 470
Query: 548 GRMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G ++ A+ Q + + W LL G LAE R+++
Sbjct: 471 GHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVL 516
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 226/418 (54%), Gaps = 16/418 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF-DGMPKRD 262
L++C +L +GK++H +I +G+ + +LI MY KCG + A LVF D +R+
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++NA+ISG+ NG KG + MR V PD T V+ V + K ++HG
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHG 134
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
++KMG DV V + L+ YL G+ E+ +KVF + +DVV W MI+ Y D+
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+E ++ M +G P TI +LS A G+LD G +H + M+ G S + ++N LID
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MY KCK I AL +F I +K++ SW SII L F KM+ + P+ VT
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDG--------FLPNALLDMYVRCGRMKPA 553
+ ++L AC+ + ALM G+EIH + + G+ D + NA++DMY +CG M A
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
F+S +++DV++WNI++ GY G A F +M ++ K N L+G+ C
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACN 432
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 230/449 (51%), Gaps = 25/449 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHS 119
N+ ++ NG + ++ M+ + D+ +VR C E K+ +H
Sbjct: 82 NAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKK-------IHG 134
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ K L V +G+A ++ ++K G + A VFG++ RD+ WN +I GYAK G DE
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
AL +++RM V GV P +T +L DL GK VH V++ GY++ V V NALI
Sbjct: 195 ALEVFRRMH-VKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALI 253
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A ++F+ + ++D SWN++IS + + G++ L LF M + PD +
Sbjct: 254 DMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS--------DDVSVCNPLIKMYLSFGNREE 351
T+++V+ A + GRE+HGY+I G D++ V N ++ MY G+
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACA 410
K+F M KDV SW MI Y +A+ + QM EAE P+E+T+ VLSAC
Sbjct: 374 ALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFK-PNEVTLVGVLSACN 432
Query: 411 CLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISW 468
G + G + L Q+ G+I I +IDM + ++ A E+ ++P N + W
Sbjct: 433 HAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVW 492
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKP 497
+++ RL+ + A I R+ +L L+P
Sbjct: 493 RALLGACRLHGNAELAEIAARQ-VLQLEP 520
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 255/500 (51%), Gaps = 7/500 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H + KT +G + L M+ + G L A VF ++ RDL SW+ ++ Y +
Sbjct: 121 GRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVE 180
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G E L + + M GV PD T V CG V L+ K VH +VIR D
Sbjct: 181 NGRPREGLEMLRWMV-SEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDAS 239
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ N+LI MY +C L A+ +F+ + W +MIS +NG + + + F M+E
Sbjct: 240 LRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESE 299
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREEG 352
V+ + +T+ SV+ +G K G+ VH ++++ D+ + L+ Y +
Sbjct: 300 VEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSC 359
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
EK+ + + VVSW T+IS Y L ++A+ + M +G MPD ++AS +SACA
Sbjct: 360 EKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGA 419
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++ G ++H + G + N+L+DMYSKC +D A +F +I +K++++W +I
Sbjct: 420 SSVRFGQQIHGHVTKRGFADEFV-QNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMI 478
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G N S EAL F +M N + N VT +S + AC+ G L+ GK IH + GV
Sbjct: 479 CGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQ 538
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D ++ AL+DMY +CG +K A FNS E+ V +W+ ++ Y GQ A F KM
Sbjct: 539 KDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKM 598
Query: 591 IDS--KGNWRKLMGLFRKCQ 608
++S K N M + C+
Sbjct: 599 VESHIKPNEVTFMNILSACR 618
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 243/495 (49%), Gaps = 9/495 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L R C R + L+ H VV T H L + + G L + VF D
Sbjct: 7 LFRSCSTLRSLSQ-LHAHLVV--TGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPD 63
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKE 218
F + VLI Y FD+ +SLY G + + +P V++ V L G++
Sbjct: 64 SFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRK 123
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH +++ G D + +L+ MY + G L AR VFD + RD +SW+++++ Y ENG
Sbjct: 124 VHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGR 183
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+GL + M V PD +T+ SV A VG +L + VHGYVI+ + D S+ N
Sbjct: 184 PREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNS 243
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI MY + +F + WT+MIS + ++A++ ++ M+ +
Sbjct: 244 LIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVN 303
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVF 457
+T+ SVL CA LG L G +H +R + + + L+D Y+ C I ++
Sbjct: 304 AVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLL 363
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
I + +V+SW ++I + EA++ F M+ L P+S +L S +SACA ++
Sbjct: 364 CLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVR 423
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA 575
G++IH H + G A D F+ N+L+DMY +CG + A+ F+ E+ + WN ++ G++
Sbjct: 424 FGQQIHGHVTKRGFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFS 482
Query: 576 ERGQGALAEEFFRKM 590
+ G A + F +M
Sbjct: 483 QNGISVEALKLFDEM 497
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 25/507 (4%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V +RL + GY V+ K M+ L N+ + M+ + L A +F + D
Sbjct: 216 VGCLRLAKSVHGY--------VIRKEMAG-DASLRNSLIVMYGQCSYLRGAKGMFESVSD 266
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
W +I + G F+EA+ +++M V+ + T VL C + LK GK
Sbjct: 267 PSTACWTSMISSCNQNGCFEEAIDAFKKM-QESEVEVNAVTMISVLCCCARLGWLKEGKS 325
Query: 219 VHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH ++R + AD+D+ AL+ Y C + + + +SWN +IS Y G
Sbjct: 326 VHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREG 385
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ ++LF+ M E + PD +L+S ISA + G+++HG+V K GF+D+ V N
Sbjct: 386 LNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEF-VQN 444
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G + +F ++ K +V+W MI + + + +A++ + M
Sbjct: 445 SLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDI 504
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+E+T S + AC+ G L G +H + +G+ + I L+DMY+KC + A VF
Sbjct: 505 NEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVF 564
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
+ +P+K+V+SW+++I ++ + A F KM+ ++KPN VT ++ILSAC G++
Sbjct: 565 NSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVE 624
Query: 517 CGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNSNER--DVSAWNI 569
GK + +++R G +PNA ++D+ R G + A+ S + D S W
Sbjct: 625 EGK-FYFNSMRD----YGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGA 679
Query: 570 LLTGYAERGQGALAEEFFRKMIDSKGN 596
LL G G+ L +++ + + N
Sbjct: 680 LLNGCRIHGRMDLIHNIHKELREIRTN 706
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 19/464 (4%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
++ S +T S ++ NG E+A+ MQE + V+ +++++ C
Sbjct: 262 ESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLK 321
Query: 113 EGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
EG +H ++ + M + LG A + + + + + + + SWN LI Y
Sbjct: 322 EGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIY 381
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ G +EA+ L+ M G+ PD ++ + C G ++ G+++H HV + G+ AD
Sbjct: 382 AREGLNEEAMVLFVCML-EKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-AD 439
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V N+L+ MY KCG + A +FD + ++ ++WN MI G+ +NG ++ L LF M
Sbjct: 440 EFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCF 499
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+D + +T S I A G G+ +H ++ G D+ + L+ MY G+ +
Sbjct: 500 NCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKT 559
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+ VF+ M K VVSW+ MI+ Y A + M P+E+T ++LSAC
Sbjct: 560 AQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRH 619
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIAN-----TLIDMYSKCKCIDKALEVFH---QIPDK 463
G+++ G K + +MR Y I+ N +++D+ S+ ID A E+ Q D
Sbjct: 620 AGSVEEG-KFYFNSMR----DYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDA 674
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
++ W +++ G R++ R + + K + ++ N ++LS
Sbjct: 675 SI--WGALLNGCRIHGR-MDLIHNIHKELREIRTNDTGYYTLLS 715
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 263/494 (53%), Gaps = 17/494 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS-VRLGNAF 136
+A+ M E +E + R C K G + + KT S V +G A
Sbjct: 25 EAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCAL 84
Query: 137 LSMFVKF-GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ MFVK GDL A+ VF +M DR++ +W ++I + + GF +A+ L+ M G V P
Sbjct: 85 IDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYV-P 143
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---GDLVRAR 252
D +T V+ C + L G++ H V++ G + DV V +L+ MY KC G + AR
Sbjct: 144 DRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDAR 203
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD MP + +SW A+I+GY ++G + + LF+ M + V P+ T SSV+ A +
Sbjct: 204 KVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANL 263
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D LG +V+ V+KM + V N LI MY GN E K F + K++VS+ T++
Sbjct: 264 SDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIV 323
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y S+ ++A E + +E G+ + T AS+LS + +G + G ++H +++G
Sbjct: 324 NAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFK 383
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + I N LI MYS+C I+ A +VF+++ D NVISWTS+I G + + AL F KM
Sbjct: 384 SNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKM 443
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
+ + PN VT +++LSAC+ +G + G + H ++++ G +P ++D+
Sbjct: 444 LEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMKVE---HGIVPRMEHYACVVDLLG 499
Query: 546 RCGRMKPAWNQFNS 559
R G ++ A NS
Sbjct: 500 RSGHLEEAMELVNS 513
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 242/443 (54%), Gaps = 9/443 (2%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RDL SW+ LI YA EA+S + M G P+ Y F V R C ++ GK
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECG-FYPNEYCFTGVFRACSNKENISLGKI 63
Query: 219 VHVHVIRFGY-EADVDVVNALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +++ GY E+DV V ALI M+VK GDL A VFD MP R+ ++W MI+ + +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + LF+ M PD TLS V+SA +G LGR+ H V+K G DV V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 337 NPLIKMY---LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-AVETYQMMEA 392
L+ MY ++ G+ ++ KVF RM +V+SWT +I+ Y S D+ A+E + M
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
P+ T +SVL ACA L ++ LG +++ L ++ L S + N+LI MYS+C ++
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A + F + +KN++S+ +I+ + S EA F ++ N+ T S+LS +
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
IGA+ G++IH+ L+ G + + NAL+ MY RCG ++ A+ FN + +V +W +
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+TG+A+ G A E F KM+++
Sbjct: 424 ITGFAKHGFATRALETFHKMLEA 446
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 190/339 (56%), Gaps = 8/339 (2%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
KRD +SW+A+IS Y N + + + F M E P+ + V A + LG+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 320 VHGYVIKMG-FSDDVSVCNPLIKMYL-SFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ G+++K G F DV V LI M++ G+ E KVF RM ++VV+WT MI+ ++
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
AV+ + M G +PD T++ V+SACA +G L LG + H L M++GL + +
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 438 NTLIDMYSKC---KCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMML 493
+L+DMY+KC +D A +VF ++P NV+SWT+II G ++ EA+ F +M+
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KPN T S+L ACA + + G++++A +++ +A + N+L+ MY RCG M+
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ E+++ ++N ++ YA+ A E F ++
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI 342
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 210/427 (49%), Gaps = 37/427 (8%)
Query: 73 NGSLEQALKYLDSMQELNICV-------------------------------DEDALVNL 101
NG LE A K D M + N+ D L +
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKF---GDLGHAWYVFGKMCD 158
V C G H +V K+ L V +G + + M+ K G + A VF +M
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 159 RDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
++ SW +I GY ++G D EA+ L+ M G VKP+ +TF VL+ C + D+ G+
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQ-GQVKPNHFTFSSVLKACANLSDIWLGE 270
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+V+ V++ + V N+LI+MY +CG++ AR FD + +++ +S+N +++ Y ++
Sbjct: 271 QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSL 330
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ LF + + T +S++S + +G G ++H ++K GF ++ +CN
Sbjct: 331 NSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICN 390
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI MY GN E +VF+ M +V+SWT+MI+ + +A+ET+ M G P
Sbjct: 391 ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450
Query: 398 DEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+E+T +VLSAC+ +G + G+K + + G++ + ++D+ + +++A+E+
Sbjct: 451 NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMEL 510
Query: 457 FHQIPDK 463
+ +P K
Sbjct: 511 VNSMPFK 517
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 127/241 (52%), Gaps = 8/241 (3%)
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+VSW+ +ISCY + +A+ + M G P+E V AC+ N+ LG +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 422 HQLAMRTGLI-SYIIIANTLIDMYSKCKC-IDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++TG S + + LIDM+ K ++ A +VF ++PD+NV++WT +I +
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
S +A+ F M+L+ P+ TL ++SACA +G L G++ H ++ G+ D +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 539 ALLDMYVRC---GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ-GALAEEFFRKMIDS 593
+L+DMY +C G + A F+ +V +W ++TGY + G A E F +M+
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 594 K 594
+
Sbjct: 245 Q 245
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 242/479 (50%), Gaps = 6/479 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L +K G + A +F KM RD SW LI GY A +EAL L+ M+ G+
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + L+ C ++ G+ +H ++ G V V +AL+ MY+K G +
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M R+ +SW A+I G G + GL F M V D T + + AS G
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H IK GF++ V N L MY + ++F +M + DVVSWT +I
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y ++A++ ++ M P+E T ASV+SACA L G ++H A+R GL+
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ ++N++I +YSKC + +A VF + K++ISW++II + + EA + M
Sbjct: 388 LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSR 447
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
KPN L S+LS C + L GK++HA+AL IG+ + + +AL+ MY R G ++
Sbjct: 448 EGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQE 507
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
A F+S D+ +W ++ GYAE G A F I S G ++ +G+ C
Sbjct: 508 ASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFEN-ISSVGLMPDYVTFIGILTAC 565
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 220/459 (47%), Gaps = 37/459 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H+ K + + + N +M+ K + +FGKM D+ SW LI Y +
Sbjct: 271 GKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ 330
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + AL ++RM V P+ YTF V+ C + K G+++H H +R G +
Sbjct: 331 MGDEERALDAFKRMR-KSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALS 389
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N++IT+Y KCG L A LVFDGM ++D ISW+ +IS Y + + M
Sbjct: 390 VSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREG 449
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ L+SV+S + + G++VH Y + +G + V + LI MY GN +E
Sbjct: 450 PKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEAS 509
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K+F +++ D+VSWT MI+ Y +A+ ++ + + G MPD +T +L+AC G
Sbjct: 510 KIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAG 569
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDK-NVIS 467
+DLG ++L Y I + +ID+ + + +A + +P + +
Sbjct: 570 LVDLGFYYYKLMTN----EYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV 625
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNS----VTLVSILSACARIGALMCGKEIHA 523
W++++ R ++ + I+ + ML L PNS +TL +I SA R +E A
Sbjct: 626 WSTLLRACR-DHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGR-------REEAA 677
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER 562
H ++ M + +P W+ NSN++
Sbjct: 678 HVRKL--------------MKSKGVIKEPGWSWINSNDQ 702
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 183/363 (50%), Gaps = 6/363 (1%)
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
Y ++ +N+ + +K G + AR +F+ M RD ISW +I+GY + L+LF
Sbjct: 80 YVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFS 139
Query: 288 -MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + + D +S + A L + G +HG+ +K G + V V + L+ MY+
Sbjct: 140 NMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKV 199
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E+G VF M +++VVSWT +I + + + M D T A L
Sbjct: 200 GKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVAL 259
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
A A G L G +H ++ G + NTL MYSKC+ D + +F ++ +V+
Sbjct: 260 KASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVV 319
Query: 467 SWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SWT++I+ AL F++M ++ PN T S++SACA + G++IH HA
Sbjct: 320 SWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHA 379
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAE 584
LR+G+ + N+++ +Y +CG ++ A F+ R D+ +W+ +++ Y QG+ A+
Sbjct: 380 LRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC---QGSHAK 436
Query: 585 EFF 587
E F
Sbjct: 437 EAF 439
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 234/452 (51%), Gaps = 6/452 (1%)
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+W+ D +H++V + V + + ++ + F + A VF +M +RD+ SW
Sbjct: 135 KWRSNGDA---IHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWT 191
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I A+ G +D+ L + M G+ P+ T +L CG + G+ V+ V +
Sbjct: 192 SMISACAQCGHWDKVLKMLSEM-QAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
FG EADVD+ NALI+MY KCG L A F MP R SWN +I G+ +N E+ + L +
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M V PD +TL SV+SA +G+ + G VH Y+ G D + N LI MY
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ E+VF M KDVVSWT M+ Y A ++ M+ + E+ + S+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
LSAC+ LG LD G ++H + + + + L+DMY+KC CID A E+F ++ K
Sbjct: 431 LSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQT 490
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW ++I GL N EA+ F +M + + KP+ +TL ++L ACA +G + G
Sbjct: 491 LSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY 550
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+GV D ++D+ R G + A++
Sbjct: 551 LMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFH 582
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 238/463 (51%), Gaps = 6/463 (1%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A L+ D+ +A VF M + F WN +I GY+ +AL++++ M GV
Sbjct: 57 ALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMR-RRGVS 115
Query: 195 PDVYTFPCVLRTCGGVPDLK---RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD YT V+ LK G +H V R G+ +DV V++ L+ Y + A
Sbjct: 116 PDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEA 175
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M +RD +SW +MIS + G + K L + M+ + P+ +T+ S++SA
Sbjct: 176 SKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQT 235
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GR V+ V K G DV + N LI MY G + + F M ++ SW T+I
Sbjct: 236 QAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLI 295
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + +A+ ++ M G PD IT+ SVLSACA LG L G+ +H G+
Sbjct: 296 DGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGIC 355
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I+ N+LI+MY+KC + A VF + K+V+SWT ++ G ++ A F +M
Sbjct: 356 CDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEM 415
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + + + LVS+LSAC+++GAL G+EIH++ + VA D L +AL+DMY +CG +
Sbjct: 416 KIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCI 475
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F + +WN ++ G A G G A E F +M++
Sbjct: 476 DTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLE 518
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 209/381 (54%), Gaps = 8/381 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCG---DLVRARLVFDGMPKRDRISWNAMISGYF 274
E+H ++R +D V LI + D+ AR VFDGM + + WN MI GY
Sbjct: 35 ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYS 94
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSD 331
L +F MR V PD T+++V+SAS K G +H V ++GF+
Sbjct: 95 SCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTS 154
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
DV V + L+ Y +F + EE KVF M +DVVSWT+MIS DK ++ M+
Sbjct: 155 DVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
AEG +P+++TI S+LSAC +D G ++ + G+ + + I N LI MY+KC C+
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
ALE F +P + SW ++I G N+ EAL F +M+L+ + P+ +TLVS+LSACA
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++G L G +H++ G+ D L N+L++MY +CG M A F + ++DV +W +
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ GY + Q +A F +M
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEM 415
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 224/440 (50%), Gaps = 7/440 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ LK L MQ I ++ +++L+ C + DEG ++++ V K V +
Sbjct: 201 GHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIR 260
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K G L A F M R SWN LI G+ + EAL +++ M + GV
Sbjct: 261 NALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML-LHGV 319
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T VL C + +L++G VH ++ G D + N+LI MY KCGD+ A
Sbjct: 320 TPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAER 379
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M K+D +SW M+ GY + ++ LF M+ V M L S++SA +G
Sbjct: 380 VFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGA 439
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H Y+ +M + D+ + + L+ MY G + ++F +M+ K +SW MI
Sbjct: 440 LDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGG 499
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +AVE + QM+E + PD IT+ +VL ACA +G +D G++ L G++
Sbjct: 500 LASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVP 559
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++D+ + +D+A ++P + N + W S++ R+++R + +
Sbjct: 560 DTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHR-MDLGKVIGQH 618
Query: 492 MLNLKPNSV---TLVSILSA 508
++N+ PN V LVS L A
Sbjct: 619 IVNVAPNDVGVHVLVSNLHA 638
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 233/467 (49%), Gaps = 34/467 (7%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D LF N LI GY+ AG EA+ LY RM V GV P+ YTFP VL C + G
Sbjct: 93 DDALFMLNSLIRGYSSAGLGREAILLYVRML-VLGVTPNHYTFPFVLSGCTKIAAFCEGI 151
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+VH V++ G E DV + N LI Y +CG + VF+GM +R+ +SW ++I GY
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + LF M E + P +T+ VISA + D +G V Y+ ++G + + N
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY+ G + +++F +++V + T++S Y L +A+ M +G P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC-----KC--- 449
D +T+ S +SA A L +L G H +R GL + I N +IDMY KC C
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391
Query: 450 -----------------------IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
++ A EVF+QIP++N + W ++I GL + +A+
Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
FR+M +K + VT++ I SAC +GA K +H + + G+ D L AL+DM+
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RCG + A FN ERDVSAW + A G G A F +M+
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQML 558
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 238/503 (47%), Gaps = 35/503 (6%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C + EG+ +H V K V + N + + + G + H VF M +R++ SW
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
LI GYA+ EA+SL+ M G++P T CV+ C + DL G+ V ++
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVE-AGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G + + +VNAL+ MY+KCG + A+ +FD R+ + +N ++S Y G + L
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M + PD +T+ S ISAS + D G+ HGYVI+ G S+ N +I MY+
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYM 379
Query: 345 SFGNREEGEKVFSRMESKDVVSWT-------------------------------TMISC 373
G E +VF M +K VVSW TMIS
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
L + A+E ++ M+ EG D +T+ + SAC LG +L +H + G+
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + L+DM+++C A++VF+++ +++V +WT+ I + + A F +M++
Sbjct: 500 MRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLI 559
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+KP+ V V +L+AC+ G + G I + G++ ++D+ R G ++
Sbjct: 560 QGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLRE 619
Query: 553 AWNQFNS--NERDVSAWNILLTG 573
A++ S E + W LL
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAA 642
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 208/419 (49%), Gaps = 23/419 (5%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-------DLVRARLVFD 256
LR C + LK ++H + + G +D + + +T V G L AR F+
Sbjct: 32 LRCCKTLNQLK---QLHCQITKNG----LDQIPSTLTKLVNAGAEIASPESLDYARKAFE 84
Query: 257 GMPKRDR-----ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ R N++I GY G + ++L++ M + V P+ T V+S +
Sbjct: 85 LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI 144
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +VHG V+KMG +DV + N LI Y G+ + G KVF M ++VVSWT++I
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLI 204
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y P +AV + M G P +T+ V+SACA L +LD+G ++ GL
Sbjct: 205 CGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLK 264
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++ N L+DMY KC ID A +F + D+N++ + +I+ + EAL +M
Sbjct: 265 LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 324
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ +P+ VT++S +SA A++ L GK H + +R G+ + N ++DMY++CG+
Sbjct: 325 LQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKP 384
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN-WRKLM-GLFRK 606
+ A F+ + + V +WN L G+ G A E F ++ + W ++ GL +K
Sbjct: 385 EMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQK 443
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 207/463 (44%), Gaps = 34/463 (7%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A+ M E I +V ++ C R D G + + + + L+ + NA
Sbjct: 214 KEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNAL 273
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M++K G + A +F + DR+L +N ++ YA+ G EAL++ M G +PD
Sbjct: 274 VDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ-QGPRPD 332
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---------- 246
T + + DL GK H +VIR G E + N +I MY+KCG
Sbjct: 333 RVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFD 392
Query: 247 ---------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
D+ A VF+ +P+R+ + WN MISG + + + L
Sbjct: 393 LMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIEL 452
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M+ + D +T+ + SA +G +L + VH Y+ K G D+ + L+ M+
Sbjct: 453 FREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFAR 512
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ + +VF++M +DV +WT I + A + M +G PD + V
Sbjct: 513 CGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQV 572
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKN 464
L+AC+ G ++ G+ + L G+ I ++D+ + + +A ++ +P + N
Sbjct: 573 LTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPN 632
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ W S++ R+ +++ E + + + L P + +LS
Sbjct: 633 DVVWGSLLAACRV-HKNVEMATYAAERINELAPQRAGVHVLLS 674
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L E A++ MQ I D ++ + C + + ++H+ + K
Sbjct: 434 NTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEK 493
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+RL A + MF + GD A VF KM +RD+ +W IG A G + A L
Sbjct: 494 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGL 553
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + GVKPDV F VL C +++G + + G ++ ++ +
Sbjct: 554 FNQML-IQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLG 612
Query: 244 KCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ G L A + MP + + + W ++++
Sbjct: 613 RAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL------ISYIIIANTLI 441
Q+ EA+ M + + L C L L +LH + GL ++ ++ A I
Sbjct: 15 QIKEAD-PMTKDSCLNESLRCCKTLNQLK---QLHCQITKNGLDQIPSTLTKLVNAGAEI 70
Query: 442 DMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEA-LIFFRKMMLNLKPN 498
KA E+F + D + S+I G EA L++ R ++L + PN
Sbjct: 71 ASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPN 130
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T +LS C +I A G ++H +++G+ D F+ N L+ Y CG M F
Sbjct: 131 HYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFE 190
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ER+V +W L+ GYA + A F +M+++
Sbjct: 191 GMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEA 226
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 272/526 (51%), Gaps = 15/526 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY--DEGLYLHSVVSKTMSHLSVR 131
G E+A+ M L + + + +L+ C + GY DEG +H V KT V
Sbjct: 824 GLYEEAVGLFCQMWGLGVEPNGFMVASLITACS-RSGYMADEGFQVHGFVVKTGILGDVY 882
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + + G + +A +F +M D ++ SW L+ GY+ +G E L++YQRM
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE- 941
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV + TF V +CG + D G +V H+I++G+E V V N+LI+M+ + A
Sbjct: 942 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD M + D ISWNAMIS Y +G + L F MR + + + TLSS++S V
Sbjct: 1002 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 1061
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ K GR +HG V+K+G +V +CN L+ +Y G E+ E VF M +D++SW +M+
Sbjct: 1062 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 1121
Query: 372 SCY--EGSVLPDKAV--ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+CY +G L + E QM G + + +T AS L+AC+ L +H L +
Sbjct: 1122 ACYVQDGKCLDGLKILAELLQM----GKVMNHVTFASALAACSNPECLIESKIVHALIIV 1177
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G ++I+ N L+ MY K + +A +V +P + ++W ++I G N EA+
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 1237
Query: 488 FRKMMLNLKP-NSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYV 545
++ + P N +T+VS+L AC+ L+ G IHAH + G D ++ N+L+ MY
Sbjct: 1238 YKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYA 1297
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + + F+ + WN ++ A G G A + F +M
Sbjct: 1298 KCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEM 1343
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 266/504 (52%), Gaps = 16/504 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH+ +L + N ++M+ KFG++ HA YVF +M R+ SW+ ++ GY +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA 230
G ++EA+ L+ +M W GV+P+ + ++ C G + D G +VH V++ G
Sbjct: 823 VGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMAD--EGFQVHGFVVKTGILG 879
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V AL+ Y G + A+ +F+ MP + +SW +++ GY ++G + L ++ MR
Sbjct: 880 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 939
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ V + T ++V S+ L+ D+ LG +V G++I+ GF D VSV N LI M+ SF + E
Sbjct: 940 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E VF M D++SW MIS Y L +++ + M + + T++S+LS C+
Sbjct: 1000 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 1059
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ NL G +H L ++ GL S + I NTL+ +YS+ + A VF + ++++ISW S
Sbjct: 1060 SVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNS 1119
Query: 471 IILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
++ + + + L I + + N VT S L+AC+ L+ K + HAL I
Sbjct: 1120 MMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIV--HALIIV 1177
Query: 530 VAFDGFL--PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
F FL NAL+ MY + G M A + + D WN L+ G+AE + A +
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 1237
Query: 587 FRKMIDSKG---NWRKLMGLFRKC 607
+ K+I KG N+ ++ + C
Sbjct: 1238 Y-KLIREKGIPANYITMVSVLGAC 1260
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 216/396 (54%), Gaps = 4/396 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C K+G +H H+I G+ +D+ + LI YVK GD++ AR VFDGMP+R
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW AM+SGY +NG + K +LF MR V + T S + A + +G +V G
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ K F +++ V + L+ + G E+ +F M +DVVSW MI Y D
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+ ++ M G +PD T+ SVL A A G L + ++H + + G SY I+ LI+
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN-RSFEALIFFRKM-MLNLKPNSV 500
Y+K + A ++ + K++ S T++I G S +AL F++M +N+ + V
Sbjct: 276 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDV 335
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
L S+L+ CA + + G +IHA AL+ ++D + NAL+DMY + G ++ A F+
Sbjct: 336 ILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM 395
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
E++V +W L++GYA+ G G +A ++KM +SKG
Sbjct: 396 EEKNVISWTSLISGYAKHGYGHMAVSLYKKM-ESKG 430
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 260/528 (49%), Gaps = 13/528 (2%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT 124
S++ C G L +ALK L S +D + +++LC K+ +G +H+ +
Sbjct: 3 SKIQSACNLGRLAEALKLLSSNPTR---LDPSLYLKILQLCIDKKAKKQGHLIHTHLITN 59
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
+ L + +VK GD+ A VF M +R + SW ++ GY++ G F++A L+
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G VK + +T+ LR C + L G +V + + + ++ V +AL+ + K
Sbjct: 120 SDMRHCG-VKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSK 178
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSS 303
CG + A +F M +RD +SWNAMI GY G +F M+R LV PD TL S
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV-PDCYTLGS 237
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ AS G + ++HG + ++G+ V LI Y G+ + + M KD
Sbjct: 238 VLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 297
Query: 364 VVSWTTMISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ S T +I+ Y EG D A++ ++ M D++ + S+L+ CA L + LG ++
Sbjct: 298 LFSSTALITGYAHEGIYSVD-ALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQI 356
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A++ + + N LIDMY+K I+ A F ++ +KNVISWTS+I G +
Sbjct: 357 HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYG 416
Query: 482 FEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL-RIGVAFDGFLPNA 539
A+ ++KM KPN VT +S+L AC+ G G E + + + + +
Sbjct: 417 HMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSC 476
Query: 540 LLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEE 585
++D++ R G ++ A+N + + S W +L + G +L +E
Sbjct: 477 MVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKE 524
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 221/451 (49%), Gaps = 10/451 (2%)
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+W RG +H +V K +V + N L+++ + G A VF M +RDL SWN
Sbjct: 1065 KWGRG------IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 1118
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
++ Y + G + L + + +G V V TF L C L K VH +I
Sbjct: 1119 SMMACYVQDGKCLDGLKILAELLQMGKVMNHV-TFASALAACSNPECLIESKIVHALIIV 1177
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
G+ + V NAL+TMY K G ++ A+ V MP+ DR++WNA+I G+ EN E + +
Sbjct: 1178 AGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKA 1237
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ ++RE + +++T+ SV+ A D K G +H +++ GF D V N LI MY
Sbjct: 1238 YKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYA 1297
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ +F + +K ++W M++ ++A++ + M G D+ + +
Sbjct: 1298 KCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSG 1357
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L+A A L L+ G +LH L ++ G S + + N +DMY KC + L++ Q +++
Sbjct: 1358 GLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRS 1417
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW +I + +A F +M+ L KP+ VT VS+LSAC G + G +
Sbjct: 1418 RLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYD 1477
Query: 524 HALRIGVAFDGFLPNA-LLDMYVRCGRMKPA 553
R F G ++D+ R GR+ A
Sbjct: 1478 SMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 1508
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 218/447 (48%), Gaps = 11/447 (2%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
CL+G LK L + ++ ++ + + C E +H+++ H +
Sbjct: 1130 CLDG-----LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 1184
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+GNA ++M+ K G + A V M D +WN LIGG+A+ +EA+ Y ++
Sbjct: 1185 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY-KLIRE 1243
Query: 191 GGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+ + T VL C DL K G +H H++ G+E+D V N+LITMY KCGDL
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 1303
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ +FDG+ + I+WNAM++ +G + L +F MR V V+ D + S ++A+
Sbjct: 1304 SSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATA 1363
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G+++HG VIK+GF D+ V N + MY G + K+ + ++ +SW
Sbjct: 1364 NLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNI 1423
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT- 428
+IS + KA ET+ M G PD +T S+LSAC G +D G+ + R
Sbjct: 1424 LISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREF 1483
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
G+ I +ID+ + + A ++P N ++W S++ R++ + E
Sbjct: 1484 GVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHG-NLELARK 1542
Query: 488 FRKMMLNLKPNSVTLVSILS-ACARIG 513
+ +L L P+ + + S CA G
Sbjct: 1543 TAEHLLELDPSDDSAYVLYSNVCATSG 1569
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 257/505 (50%), Gaps = 6/505 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D + L+R C + +G+ +H ++++ LGN + M+ G +G A +
Sbjct: 1 MDSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREI 60
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F K+ DR+++SW +++ YA+ G + EAL L +M + G++P+ TF +L C + D
Sbjct: 61 FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMD-LEGIRPNSVTFLWILGACSNLGD 119
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
++ G+++H ++ G++ D V A++ MY KC L A+ +FD + ++D +SW A+I+
Sbjct: 120 VETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITA 179
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ + G L LF M V P+ T ++++A + + G +++ I G+ D
Sbjct: 180 FSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGAD 239
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V + + MY FGN E + F + K SW ++ Y +A+ Y+ M+
Sbjct: 240 VFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDV 299
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G+ PD T +L AC+ LG L+ G ++H R G + + ++ MY+KC I+
Sbjct: 300 HGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEH 356
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
A+ F ++ NV+ W ++I G EAL + M L L+ + T S+L AC+
Sbjct: 357 AMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSG 416
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
L G+ +HA + G+ L N L++M+ +CG + A F R+ +WN +
Sbjct: 417 AKDLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSM 476
Query: 571 LTGYAERGQGALAEEFFRKMIDSKG 595
+T + + G G A E F++M+ G
Sbjct: 477 VTAFCQHGDGGGAFELFKEMLLEGG 501
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 236/474 (49%), Gaps = 23/474 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E VN++ C + ++G L+ V +G+ ++M+ +FG+L A F
Sbjct: 204 NESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAF 263
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ ++ SWN ++ Y + G +ALSLY+ M V G +PD +T C+L C + L
Sbjct: 264 DHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMD-VHGAEPDTFTHVCLLGACSSLGAL 322
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+ +H R G + D +A++ MY KCG + A F M + + WNA+I+GY
Sbjct: 323 EEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGY 379
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ + + L L+ M ++ D T SSV+ A D GR VH ++ G V
Sbjct: 380 VQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVV 439
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ N L+ M+ G+ ++F M S++ VSW +M++ + A E ++ M E
Sbjct: 440 PLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLE 499
Query: 394 GSMPDEITIASVLSAC---ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY-----S 445
G P E T S+L+ C AC +LD G LHQ +G+ S +A L+ MY +
Sbjct: 500 GGEPHEQTFTSILNFCSHSAC-SSLDQGKALHQRITASGVDSDPTVATCLLTMYLLNALA 558
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
KC +D A VF I KNV+SWT++I+G + R AL FR+M L+ ++ + +T S
Sbjct: 559 KCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTS 618
Query: 505 ILSACARIGALMCGKE-----IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
IL AC+ G + G+E + HA +A N ++DM R GR+ A
Sbjct: 619 ILHACSHRGLVRVGREYFRSMVEDHA----IAPSAEHYNVVMDMLARAGRVGEA 668
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 232/468 (49%), Gaps = 13/468 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ A L M+ K LG A +F + +D+ SW +I +++ G AL L+ M +
Sbjct: 141 VSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMD-LD 199
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVKP+ TF +L C + L+ G +++ I GY ADV V + +TMY + G+LV A
Sbjct: 200 GVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEA 259
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ FD + ++ SWNA++ Y ++G + L L+ M +PD T ++ A +
Sbjct: 260 KAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSL 319
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G + G +H +MG D + ++ MY G E F++M S +VV W +I
Sbjct: 320 GALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALI 376
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y +A++ Y M EG D T +SVL AC+ +L G +H + GL
Sbjct: 377 AGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLE 436
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N L++M++KC + ALE+F + +N +SW S++ + A F++M
Sbjct: 437 VVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEM 496
Query: 492 ML-NLKPNSVTLVSILSACAR--IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV--- 545
+L +P+ T SIL+ C+ +L GK +H GV D + LL MY+
Sbjct: 497 LLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMYLLNA 556
Query: 546 --RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A F+ ++V +W ++ GYA+ +G A E FR+M
Sbjct: 557 LAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREM 604
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 18/414 (4%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+T + N+ + +G + QAL M D V L+ C +EG +H
Sbjct: 270 STGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIH 329
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ + L+ G+A ++M+ K G + HA F KM ++ WN LI GY + +
Sbjct: 330 ARMGDKPDGLA---GSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQ 386
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EAL LY M + G++ D+YTF VL C G DL G+ VH ++ G E V + N L
Sbjct: 387 EALDLYHAMN-LEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGL 445
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD--- 295
+ M+ KCG L A +F GM R+ +SWN+M++ + ++G+ G F + +E+L++
Sbjct: 446 VNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGD---GGGAFELFKEMLLEGGE 502
Query: 296 PDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYL-----SFGN 348
P T +S+++ L G+ +H + G D +V L+ MYL G
Sbjct: 503 PHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMYLLNALAKCGA 562
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
++ VF + K+V+SWT MI Y D A+E ++ ME +G DEIT S+L A
Sbjct: 563 LDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHA 622
Query: 409 CACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIP 461
C+ G + +G + + + I+ N ++DM ++ + +A EV P
Sbjct: 623 CSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEEVAKVFP 676
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 266/531 (50%), Gaps = 14/531 (2%)
Query: 89 LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
L + +D LV+ G H + KT + L N L M+ K G+
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F +M R++ SWN LI GY + GF+ E ++L++ + ++ D +TF L CG
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEA-RMSDLRLDKFTFSNALSVCG 131
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
DL+ G+ +H + G V + N+LI MY KCG + ARLVF+ + D +SWN+
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA--SELVGDEKLGREVHGYVIK 326
+I+GY G + L L + M ++ + L S + A S + G+ +HG +K
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK 251
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-----EGSVLPD 381
+G DV V L+ Y G+ E+ K+F M +VV + MI+ + +
Sbjct: 252 LGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFAN 311
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+ + M++ G P E T +S+L AC+ + + G ++H + L S I N L+
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 371
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE-ALIFFRKMMLN-LKPNS 499
++YS I+ L+ FH P +V+SWTS+I+G + N FE L F +++ + KP+
Sbjct: 372 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG-HVQNGQFEGGLTLFHELLFSGRKPDE 430
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
T+ +LSACA + A+ G++IHA+A++ G+ + N+ + MY +CG + A F
Sbjct: 431 FTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490
Query: 560 NER-DVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ D+ +W+++++ A+ G A + F M S N +G+ C
Sbjct: 491 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 541
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 238/496 (47%), Gaps = 20/496 (4%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D+ N + +C G +H++++ + V L N+ + M+ K G + A V
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 177
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG--V 210
F + D SWN LI GY + G DE L L +M G+ + Y L+ CG
Sbjct: 178 FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFS 236
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
++ GK +H ++ G + DV V AL+ Y K GDL A +F MP + + +NAMI
Sbjct: 237 SSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 296
Query: 271 SGYFE----NGEYM-KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+G+ + E+ + + LF M+ + P T SS++ A + + G+++H +
Sbjct: 297 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 356
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K D + N L+++Y G+ E+G K F DVVSWT++I + + + +
Sbjct: 357 KYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 416
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ + G PDE TI+ +LSACA L + G ++H A++TG+ ++ II N+ I MY+
Sbjct: 417 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 476
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
KC ID A F + + +++SW+ +I + + EA+ F M + PN +T +
Sbjct: 477 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 536
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNS 559
+L AC+ G + G I G PN ++D+ R GR+ A +
Sbjct: 537 VLVACSHGGLVEEG----LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMD 592
Query: 560 N--ERDVSAWNILLTG 573
+ E D W LL+
Sbjct: 593 SGFEGDPVMWRSLLSA 608
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLC--EWKRGYDEGLYLHSVVSKTMSHLSVR 131
GS ++ L+ L M + ++ AL + ++ C + + G LH K L V
Sbjct: 200 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 259
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-----FFDEALSLYQR 186
+G A L + K GDL A +F M D ++ +N +I G+ + F +EA+ L+
Sbjct: 260 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 319
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G+KP +TF +L+ C + + GK++H + ++ ++D + NAL+ +Y G
Sbjct: 320 M-QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 378
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ F PK D +SW ++I G+ +NG++ GL LF + PD T+S ++S
Sbjct: 379 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 438
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + K G ++H Y IK G + + N I MY G+ + F ++ D+VS
Sbjct: 439 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 498
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
W+ MIS +AV+ +++M+ G P+ IT VL AC+ G ++ G++ ++
Sbjct: 499 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 556
>gi|255575102|ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532132|gb|EEF33939.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 664
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 262/520 (50%), Gaps = 6/520 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++ALK + SMQ D +VNLV D LH V + N
Sbjct: 97 QEALKLVKSMQLAGQEPDFVTIVNLVPAVSRLADIDACRSLHGYVIR--RGFPAVFSNGL 154
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K GD+ A VF M + SW ++ GYA F E L L+ M + +
Sbjct: 155 IDMYSKCGDIYVACQVFELMQHTNDISWRTMMAGYAHNECFFEVLDLFDYM-KKNNFRLN 213
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ L V D RGKE+ + G ++DV + A++TMY KCG+L +A+ +F
Sbjct: 214 KVSVASALLAAADVRDSGRGKEICEFARQQGIDSDVSITTAMMTMYAKCGNLDKAKQLFQ 273
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
G+ +D ++W+A+I ++ L LF M+ + + +TL SV+ A + +L
Sbjct: 274 GLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQNDFLKANNVTLLSVLPACADLMSLRL 333
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ VH Y IK F D+ + L+ MY G VF+RM +D+V+ +I+ Y
Sbjct: 334 GKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSALTVFNRMPCEDIVTCNALINEYSQ 393
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P A+E + +++ +PD T+ +LS C L +L+ G +H L ++ G S+ +
Sbjct: 394 IGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILLHDLEQGSCIHGLIIKFGFDSHCNV 453
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
N+LIDMY+KC + A +F + K+ +SW ++I G N + EA F +M L +
Sbjct: 454 KNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWNALIAGYVHNEHAKEAFSLFCQMKLEH 513
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+PN VT VS+ A AR+ AL G +HA +R+G + + N L+DMY +CG++ +
Sbjct: 514 FQPNLVTFVSVFPAVARLSALKEGMALHACIMRMGFQSNVLVGNCLIDMYAKCGQLHNSE 573
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ F+ ++ +WN++L GYA GQG A E F M S
Sbjct: 574 HLFHEMKNKNAVSWNVMLAGYAVHGQGYHAIELFSLMQKS 613
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 257/500 (51%), Gaps = 6/500 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D+ +++ C + EG+ +H + V +G A ++M+ K GD A VF
Sbjct: 13 DKCTFTFVLKACTGGLEFKEGILIHRGIVFKGLESDVFVGTALVNMYSKMGDPQLAKGVF 72
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
KM RD+ +WN +I G + + EAL L + M + G +PD T ++ + D+
Sbjct: 73 DKMPKRDVVTWNAMIFGLSHSVAPQEALKLVKSM-QLAGQEPDFVTIVNLVPAVSRLADI 131
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ +H +VIR G+ A N LI MY KCGD+ A VF+ M + ISW M++GY
Sbjct: 132 DACRSLHGYVIRRGFPAVFS--NGLIDMYSKCGDIYVACQVFELMQHTNDISWRTMMAGY 189
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
N + + L LF M++ + ++++S + A+ V D G+E+ + + G DV
Sbjct: 190 AHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRGKEICEFARQQGIDSDV 249
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
S+ ++ MY GN ++ +++F ++ KD+V+W+ +I S + A+ ++ M+ +
Sbjct: 250 SITTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQND 309
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+ +T+ SVL ACA L +L LG +H A++ S I+I +L+ MY+KC + A
Sbjct: 310 FLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSA 369
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
L VF+++P +++++ ++I + A+ F + ++ + P+S T+V +LS C +
Sbjct: 370 LTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILL 429
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNIL 570
L G IH ++ G + N+L+DMY +CG + A F E +D +WN L
Sbjct: 430 HDLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWNAL 489
Query: 571 LTGYAERGQGALAEEFFRKM 590
+ GY A F +M
Sbjct: 490 IAGYVHNEHAKEAFSLFCQM 509
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 217/394 (55%), Gaps = 3/394 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + A ++M+ K G+L A +F + +DL +W+ +I ++ + ++ALSL++ M
Sbjct: 249 VSITTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDM-Q 307
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+K + T VL C + L+ GK VH + I+ +++D+ + +L++MY KCG
Sbjct: 308 NDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFN 367
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF+ MP D ++ NA+I+ Y + G+ + +F +++ + PD T+ ++S
Sbjct: 368 SALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCI 427
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWT 368
L+ D + G +HG +IK GF +V N LI MY G+ E +F R E +KD VSW
Sbjct: 428 LLHDLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWN 487
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+I+ Y + +A + M+ E P+ +T SV A A L L G+ LH MR
Sbjct: 488 ALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHACIMRM 547
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G S +++ N LIDMY+KC + + +FH++ +KN +SW ++ G ++ + + A+ F
Sbjct: 548 GFQSNVLVGNCLIDMYAKCGQLHNSEHLFHEMKNKNAVSWNVMLAGYAVHGQGYHAIELF 607
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEI 521
M +++ +S++ +S+LSAC G + G++I
Sbjct: 608 SLMQKSHIQADSLSFLSVLSACRHSGLIDEGRKI 641
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 217/399 (54%), Gaps = 4/399 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++PD TF VL+ C G + K G +H ++ G E+DV V AL+ MY K GD A
Sbjct: 9 GLEPDKCTFTFVLKACTGGLEFKEGILIHRGIVFKGLESDVFVGTALVNMYSKMGDPQLA 68
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ VFD MPKRD ++WNAMI G + + L L M+ +PDF+T+ +++ A +
Sbjct: 69 KGVFDKMPKRDVVTWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIVNLVPAVSRL 128
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D R +HGYVI+ GF S N LI MY G+ +VF M+ + +SW TM+
Sbjct: 129 ADIDACRSLHGYVIRRGFPAVFS--NGLIDMYSKCGDIYVACQVFELMQHTNDISWRTMM 186
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + + ++ + M+ +++++AS L A A + + G ++ + A + G+
Sbjct: 187 AGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRGKEICEFARQQGID 246
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + I ++ MY+KC +DKA ++F + K++++W++II L + + +AL FR M
Sbjct: 247 SDVSITTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDM 306
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ LK N+VTL+S+L ACA + +L GK +H +A++ D + +L+ MY +CG
Sbjct: 307 QNDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLF 366
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFR 588
A FN D+ N L+ Y++ G A E F
Sbjct: 367 NSALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFH 405
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 169/346 (48%), Gaps = 2/346 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E AL MQ + + L++++ C G +H K + +G +
Sbjct: 297 EDALSLFRDMQNDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSL 356
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+SM+ K G A VF +M D+ + N LI Y++ G A+ ++ + + + PD
Sbjct: 357 VSMYAKCGLFNSALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFH-VVQISEILPD 415
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T C+L C + DL++G +H +I+FG+++ +V N+LI MY KCG L A +F
Sbjct: 416 SRTMVCLLSVCILLHDLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFK 475
Query: 257 GMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+D +SWNA+I+GY N + LF M+ P+ +T SV A + K
Sbjct: 476 RTEFTKDEVSWNALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALK 535
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G +H +++MGF +V V N LI MY G E +F M++K+ VSW M++ Y
Sbjct: 536 EGMALHACIMRMGFQSNVLVGNCLIDMYAKCGQLHNSEHLFHEMKNKNAVSWNVMLAGYA 595
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
A+E + +M+ D ++ SVLSAC G +D G K+
Sbjct: 596 VHGQGYHAIELFSLMQKSHIQADSLSFLSVLSACRHSGLIDEGRKI 641
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 8/278 (2%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
++ V N I T N+ +NE G A++ +Q I D +V L+ +C
Sbjct: 369 ALTVFNRMPCEDIVT--CNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVC 426
Query: 106 EWKRGYDEGLYLHSVVSKTM--SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLF 162
++G +H ++ K SH +V+ N+ + M+ K G L +A ++F + +D
Sbjct: 427 ILLHDLEQGSCIHGLIIKFGFDSHCNVK--NSLIDMYAKCGSLANAEFLFKRTEFTKDEV 484
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN LI GY EA SL+ +M + +P++ TF V + LK G +H
Sbjct: 485 SWNALIAGYVHNEHAKEAFSLFCQM-KLEHFQPNLVTFVSVFPAVARLSALKEGMALHAC 543
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
++R G++++V V N LI MY KCG L + +F M ++ +SWN M++GY +G+
Sbjct: 544 IMRMGFQSNVLVGNCLIDMYAKCGQLHNSEHLFHEMKNKNAVSWNVMLAGYAVHGQGYHA 603
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+ LF +M++ + D ++ SV+SA G GR++
Sbjct: 604 IELFSLMQKSHIQADSLSFLSVLSACRHSGLIDEGRKI 641
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMY 444
Y + +G PD+ T VL AC G L+ GI +H+ + GL S + + L++MY
Sbjct: 2 YHSILNKGLEPDKCTFTFVLKACT--GGLEFKEGILIHRGIVFKGLESDVFVGTALVNMY 59
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLV 503
SK A VF ++P ++V++W ++I GL + EAL + M L +P+ VT+V
Sbjct: 60 SKMGDPQLAKGVFDKMPKRDVVTWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIV 119
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNE 561
+++ A +R+ + + +H + +R G F N L+DMY +CG + A F +
Sbjct: 120 NLVPAVSRLADIDACRSLHGYVIRRG--FPAVFSNGLIDMYSKCGDIYVACQVFELMQHT 177
Query: 562 RDVSAWNILLTGYAE 576
D+S W ++ GYA
Sbjct: 178 NDIS-WRTMMAGYAH 191
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/588 (28%), Positives = 298/588 (50%), Gaps = 28/588 (4%)
Query: 9 TSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLN 68
T P + R + R + ++ K H Q L+ ++IA+ N S L
Sbjct: 3 TRHPPFKILHRVVQQRSIQFKYFHSSKHVH---------QPLDQSPQTTIASLN-RSMLT 52
Query: 69 ELCLNGSLEQALKYLDSMQELNIC--VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L N SLE AL + +D+ + +++ C ++ ++ S +S
Sbjct: 53 ALRRNLSLE-ALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKLGCQIHAFAISSGFIS 111
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H++V N+ ++M+ K G A VF + + D+ SWN ++ G+ ++ D+AL+ R
Sbjct: 112 HVTVP--NSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALR 166
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M + G V D T VL C G ++H +++ G + +V V NALITMY +C
Sbjct: 167 MNFTG-VAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCC 225
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVI 305
LV AR VFD M +D +SWNAM+SGY + G ++ +++F+ M + + D ++ + I
Sbjct: 226 RLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAI 285
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA + +LGR++H +K+G+ V VCN LI Y + E+ + VF + ++VV
Sbjct: 286 SACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVV 345
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTMIS E + A + M +G P+++T ++ A ++ G +H +
Sbjct: 346 SWTTMISISE-----EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVC 400
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++T +S + ++N+LI MY+K + + +++VF ++ + +ISW S+I G N EAL
Sbjct: 401 VKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEAL 460
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMC--GKEIHAHALRIGVAFDGFLPNALLDM 543
F ++ +PN T S+LS+ A A+ G+ H+H L++G+ + + +ALLDM
Sbjct: 461 QTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDM 520
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y + G + + F+ ++ AW +++ +A G F+ M
Sbjct: 521 YAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDM 568
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 259/487 (53%), Gaps = 22/487 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+ AL + M + D ++ C G+ G LHS + K V +GNA
Sbjct: 158 DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNAL 217
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKP 195
++M+ + L A VF +M ++DL SWN ++ GYA+ G EA+ ++ M G+K
Sbjct: 218 ITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEML-KEGMKL 276
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +F + CG + + G+++H ++ GY+ V V N LI+ Y KC D+ A+LVF
Sbjct: 277 DHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVF 336
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + R+ +SW MIS E+ LF MR V P+ +T +I A + +
Sbjct: 337 ESIIDRNVVSWTTMISISEEDATS-----LFNEMRRDGVYPNDVTFVGLIHAITMKNLVE 391
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG +K F +++V N LI MY F + + KVF + ++++SW ++IS Y
Sbjct: 392 EGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYA 451
Query: 376 GSVLPDKAVETY--QMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLI 431
+ L +A++T+ +ME S P+E T SVLS+ A + + G + H ++ GL
Sbjct: 452 QNGLWQEALQTFLSALME---SRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLN 508
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRK 490
+ I+++ L+DMY+K I ++L VF + P KN ++WT+II + +EA++ F+
Sbjct: 509 TNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAII-SAHARHGDYEAVMNLFKD 567
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNALLDMYVR 546
M +KP+S+T +++++AC R G + G ++ ++ I + + + ++++DM R
Sbjct: 568 MEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY--SSMVDMLGR 625
Query: 547 CGRMKPA 553
GR+K A
Sbjct: 626 AGRLKEA 632
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 204/411 (49%), Gaps = 23/411 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N LE L +L+ ++E + +D + + C + ++ G +HS+ K V++
Sbjct: 257 NSGLEAILVFLEMLKE-GMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKV 315
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N +S + K D+ A VF + DR++ SW +I ++A SL+ M G
Sbjct: 316 CNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE-----EDATSLFNEM-RRDG 369
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ TF ++ ++ G+ +H ++ + ++++V N+LITMY K + +
Sbjct: 370 VYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSM 429
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD--PDFMTLSSVIS--AS 308
VF+ + R+ ISWN++ISGY +NG + + L F+ L++ P+ T SV+S AS
Sbjct: 430 KVFEELNYREIISWNSLISGYAQNGLWQEALQTFL---SALMESRPNEFTFGSVLSSIAS 486
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+ H +++K+G + + V + L+ MY G+ E VFS K+ V+WT
Sbjct: 487 AEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWT 546
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS + + + ++ ME EG PD IT +V++AC G +D G +L ++
Sbjct: 547 AIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKD 606
Query: 429 GLIS-----YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
LI Y ++++DM + + +A E QIP +S +LG
Sbjct: 607 HLIEPSPEHY----SSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLG 653
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 232/436 (53%), Gaps = 4/436 (0%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D D+ WN + Y +AG EA+ ++ M V D T+ +L + L+ GK
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI-KSRVPCDSLTYIVILSVVASLNHLELGK 317
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H V+RFG++ V V N+ I MYVK G + AR +F M + D ISWN +ISG +G
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVC 336
L LFI + + PD T++SV+ A S L +GR+VH +K G D V
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS 437
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
LI +Y G EE E +F + D+ SW M+ + S +A+ + +M G
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D+IT A+ A CL L G ++H + ++ + + + ++DMY KC + A +V
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGAL 515
F+QIP + ++WT++I G N +AL + +M L ++P+ T +++ AC+ + AL
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
GK+IHA+ +++ AFD F+ +L+DMY +CG ++ A+ F N R V+ WN ++ G
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677
Query: 575 AERGQGALAEEFFRKM 590
A+ G A FF +M
Sbjct: 678 AQHGNAEEALNFFNEM 693
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 247/483 (51%), Gaps = 8/483 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V + V + N+ ++M+VK G + +A +FG+M + DL SWN +I G A+
Sbjct: 316 GKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCAR 375
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK-RGKEVHVHVIRFGYEADV 232
+G + +L L+ + G+ PD +T VLR C + + G++VH ++ G D
Sbjct: 376 SGLEECSLRLFIDLLR-SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS 434
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V ALI +Y K G + A L+F D SWNAM+ G+ + Y + L LF +M E
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D +T ++ A+ + + G+++H VIKM F D+ V + ++ MYL G +
Sbjct: 495 GEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 353 EKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
KVF+++ S D V+WTT+IS C E ++A+ TY M G PDE T A+++ AC+
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGE-EEQALFTYHQMRLAGVQPDEYTFATLVKACSL 613
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L+ G ++H M+ + +L+DMY+KC I+ A +F ++ ++V W ++
Sbjct: 614 LTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAM 673
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIG 529
I+GL + + EAL FF +M + P+ VT + +LSAC+ G K + G
Sbjct: 674 IVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYG 733
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFF 587
V + + L+D R G ++ A +S + SA + LL +G E
Sbjct: 734 VEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVA 793
Query: 588 RKM 590
K+
Sbjct: 794 EKL 796
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 235/487 (48%), Gaps = 39/487 (8%)
Query: 115 LYLHSVVSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
LY S+ + +V++G A ++++ KF + A +F +M RD+ WNV
Sbjct: 134 LYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNV 193
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
++ Y + G DE L L+ F G++PD + +L G +
Sbjct: 194 MMKAYVEMGAGDEVLGLFS-AFHRSGLRPDCVSVRTILMGVGK---------------KT 237
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
+E +++ V A T C D D WN +S Y + GE + + F
Sbjct: 238 VFERELEQVRAYATKLFVCDD------------DSDVTVWNKTLSSYLQAGEGWEAVDCF 285
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + V D +T ++S + +LG+++HG V++ G+ VSV N I MY+
Sbjct: 286 RDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKA 345
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ ++F +M+ D++SW T+IS S L + ++ + + G +PD+ TI SVL
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405
Query: 407 SACACL-GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
AC+ L + +G ++H A++ G++ ++ LID+YSK +++A +FH ++
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
SW +++ G +++ EAL F M K + +T + A + L GK+IHA
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALA 583
+++ +D F+ + +LDMY++CG MK A FN D AW +++G E G+ A
Sbjct: 526 VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQA 585
Query: 584 EEFFRKM 590
+ +M
Sbjct: 586 LFTYHQM 592
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 4/394 (1%)
Query: 71 CLNGSLEQ-ALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVSKTMSHL 128
C LE+ +L+ + + D+ + +++R C + Y G +H+ K L
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVL 432
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ A + ++ K G + A +F DL SWN ++ G+ + + EAL L+ M
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G K D TF + G + L++GK++H VI+ + D+ V++ ++ MY+KCG++
Sbjct: 493 -ERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEM 551
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VF+ +P D ++W +ISG ENGE + L + MR V PD T ++++ A
Sbjct: 552 KSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
L+ + G+++H ++K+ + D V L+ MY GN E+ +F RM ++ V W
Sbjct: 612 SLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWN 671
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI ++A+ + M++ G PD +T VLSAC+ G K +T
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKT 731
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
G+ I + L+D S+ I +A +V +P
Sbjct: 732 YGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 222/473 (46%), Gaps = 41/473 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGY 171
G H+V+ + + + N ++M+ K G L A +F DRDL ++N ++ Y
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDV-----YTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
A G + ++ ++ V +T + + C + + + ++
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G + DV V AL+ +Y K + AR++FD MP RD + WN M+ Y E G + L LF
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 287 IMMREVLVDPDFMTLSSVI--SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ PD +++ +++ + V + +L +V Y K+ DD S
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFEREL-EQVRAYATKLFVCDDDS---------- 260
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
DV W +S Y + +AV+ ++ M D +T
Sbjct: 261 ------------------DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+LS A L +L+LG ++H +R G ++ +AN+ I+MY K ++ A +F Q+ + +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC-GKEIH 522
+ISW ++I G + +L F ++ + L P+ T+ S+L AC+ + C G+++H
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGY 574
AL+ G+ D F+ AL+D+Y + G+M+ A F N + D+++WN ++ G+
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 176/402 (43%), Gaps = 44/402 (10%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LR DL GK H ++ G D V N LITMY KCG L AR +FD P+ D
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78
Query: 263 R--ISWNAMISGYFENGEYM------KGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
R +++NA+++ Y GE + +F ++R+ ++ TLS + L G
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ GY +K+G DV V L+ +Y F E +F RM +DVV W M+ Y
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
D+ + + G PD +++ ++L G+
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---------------------MGVGKKT 237
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ L + + A ++F D +V W + +EA+ FR M+ +
Sbjct: 238 VFERELEQVRA------YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKS 291
Query: 495 LKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMK 551
P +S+T + ILS A + L GK+IH +R G +D F + N+ ++MYV+ G +
Sbjct: 292 RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFG--WDQFVSVANSAINMYVKAGSVN 349
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F E D+ +WN +++G A G L E R ID
Sbjct: 350 YARRMFGQMKEVDLISWNTVISGCARSG---LEECSLRLFID 388
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 139/323 (43%), Gaps = 47/323 (14%)
Query: 288 MMREVLVDPD------FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
M R+ V P F L I+ S+L+ LG+ H ++ G + D V N LI
Sbjct: 1 MSRKCSVSPSSLLPQWFSILRHAIADSDLI----LGKRTHAVIVTSGLNPDRYVTNNLIT 56
Query: 342 MYLSFGNREEGEKVF--SRMESKDVVSWTTMISCYEGS-VLPD-----KAVETYQMMEAE 393
MY G+ K+F + +D+V++ +++ Y + L D +A ++++
Sbjct: 57 MYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQS 116
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+ T++ + C G+ L A++ GL + +A L+++Y+K + I +A
Sbjct: 117 VMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREA 176
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+F ++P ++V+ W ++ E L F + L+P+ V++ +IL +
Sbjct: 177 RVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKK 236
Query: 513 GALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILL 571
+++ A+A ++ V D + DV+ WN L
Sbjct: 237 TVFERELEQVRAYATKLFVCDD---------------------------DSDVTVWNKTL 269
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
+ Y + G+G A + FR MI S+
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKSR 292
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 299/577 (51%), Gaps = 15/577 (2%)
Query: 20 NPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP---NSRLNELCLNGSL 76
+P +FYFK +V+V + S ++ ++ NS +N G
Sbjct: 84 DPYITTSLINFYFK------CGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHK 137
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++ + MQ + D +L L+ + GY + ++ +SV + + + L +
Sbjct: 138 KEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSV--RKVFYGDPFLESGL 195
Query: 137 LSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ G AW +F ++ D+ ++ +WNV+IGG+ + G ++ +L +Y + VK
Sbjct: 196 IYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVY-LLAKNENVKL 254
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+F L C + G +VH +++ G+E D V +L+TMY KC + A VF
Sbjct: 255 VSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVF 314
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + + WNAMIS Y NG GL ++ M+ + + PD +T ++V+S+ LVG
Sbjct: 315 DQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYD 374
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR +H ++K +V++ + L+ MY GN ++ +F+ ++ +DVV+W +MIS +
Sbjct: 375 FGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFC 434
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ +A+E Y M G PD +ASV+SAC L N++LG +H LA+++GL +
Sbjct: 435 QNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVF 494
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+A++L+DMYSK + VF +P KN+++W SII N ++ F +M
Sbjct: 495 VASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYG 554
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
L P+SV++ S+L + + + L GK +H + +R + D L NAL+DMY++CG +K A
Sbjct: 555 LFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQ 614
Query: 555 NQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F N + ++ WNI++ G G A F +M
Sbjct: 615 HIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEM 651
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 268/531 (50%), Gaps = 21/531 (3%)
Query: 75 SLEQALKYLDSMQELN---ICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSV 130
+L Q +Y+D++Q + + +L++ C + G +HS +++K +
Sbjct: 26 TLVQQGQYVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDP 85
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCD-----RDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ + ++ + K G G+A VF K+ + +D+ WN ++ GY + G E ++ +
Sbjct: 86 YITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFC 145
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM + GV+PD Y+ +L G L K++H + +R + D + + LI MY C
Sbjct: 146 RM-QLFGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSC 202
Query: 246 GDLVRA-RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE---VLVDPDFMTL 301
G + A RL + K + ++WN MI G+ ENG + L ++++ + LV F +
Sbjct: 203 GRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTST 262
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S E V G +VH ++K+GF +D VC L+ MY E+ E VF ++
Sbjct: 263 LSACCQGEFV---SFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSV 319
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K W MIS Y G+ ++ Y+ M+ PD +T +VLS+C +G+ D G +
Sbjct: 320 KKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLI 379
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ + S + + + L+ MYSKC D A +F+ I ++V++W S+I G N +
Sbjct: 380 HAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKY 439
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EAL F+ M + KP+S + S++SAC + + G IH A++ G+ D F+ ++L
Sbjct: 440 MEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSL 499
Query: 541 LDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY + K + N F+ +++ AWN +++ Y G L+ F +M
Sbjct: 500 VDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQM 550
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 242/483 (50%), Gaps = 19/483 (3%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ L+M+ K + A VF ++ + WN +I Y G + L +Y++M V +
Sbjct: 296 SLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQM-KVLQIP 354
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD T VL +C V G+ +H +++ +++V + +AL+TMY KCG+ A +
Sbjct: 355 PDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSI 414
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ + RD ++W +MISG+ +N +YM+ L + M PD ++SV+SA + +
Sbjct: 415 FNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNV 474
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
LG +HG IK G DV V + L+ MY F + VFS M K++V+W ++ISCY
Sbjct: 475 NLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCY 534
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ LPD ++ + M G PD ++I SVL + + + L G +H +R + S +
Sbjct: 535 CRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDL 594
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
+ N LIDMY KC + A +F + N+++W +I G + +A+ F +M
Sbjct: 595 QLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSF 654
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCG 548
+ P+ +T +S+L++C G + G ++ ++ G P ++D+ R G
Sbjct: 655 GIAPDDITFISLLTSCNHCGFIEEGLKL----FQLMTVEHGIEPRMEHYVNIVDLLGRAG 710
Query: 549 RMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID---SKG-NWRKLM 601
R+ A+ F N E D S W LL L + K++D S+G N+ +L+
Sbjct: 711 RLDDAY-AFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLL 769
Query: 602 GLF 604
L+
Sbjct: 770 NLY 772
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 207/420 (49%), Gaps = 7/420 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG LK M+ L I D N++ C YD G +H+ + K
Sbjct: 326 NAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVK 385
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V L +A L+M+ K G+ A +F + RD+ +W +I G+ + + EAL
Sbjct: 386 RPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEF 445
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y M V G KPD V+ C G+ ++ G +H I+ G E DV V ++L+ MY
Sbjct: 446 YNSM-TVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYS 504
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K + VF MP ++ ++WN++IS Y NG + LF M + + PD ++++S
Sbjct: 505 KFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITS 564
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + V + G+ VHGY+I+ D+ + N LI MY+ G + + +F M +
Sbjct: 565 VLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTN 624
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+W MI+ KA+ + M + G PD+IT S+L++C G ++ G+KL Q
Sbjct: 625 LVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQ 684
Query: 424 L-AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLRLNN 479
L + G+ + ++D+ + +D A + PD+++ W S++ R+++
Sbjct: 685 LMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSI--WLSLLCSCRVHH 742
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 210/374 (56%), Gaps = 6/374 (1%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
D + +F ++ ++FSWN + Y+++ F E ++LY M G PD Y+FP VL
Sbjct: 76 DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLML-RNGTLPDNYSFPFVL 134
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK--RD 262
+ C + L +G+E+H ++ G DV V NALI+ + CG + AR VFD +P RD
Sbjct: 135 KACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRD 194
Query: 263 RISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+SWN+MISGY ++ Y L +F ++ + + PD +TL S +S +G LG+++H
Sbjct: 195 VVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIH 254
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G GF DV V + LI MY G E+ KVF R+ ++ V WT+MI+ Y S L
Sbjct: 255 GLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFK 314
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+E ++ M+ G D TIA VLSAC G L G +H R + + N LI
Sbjct: 315 EAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALI 374
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNS 499
MYSKC I KALE+FH + ++ SW+++I GL +N S +AL F +M + +++PN
Sbjct: 375 GMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 434
Query: 500 VTLVSILSACARIG 513
+T + +L AC G
Sbjct: 435 ITFLGVLCACNHGG 448
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 212/428 (49%), Gaps = 11/428 (2%)
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-D 247
W G + + F L P + ++ H I G D V + L+ + D
Sbjct: 19 WAWGYRQSYHNFSLSLLQNLSHP--RSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHD 76
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+R +F + K + SWN M Y + + + L+ +M PD + V+ A
Sbjct: 77 FAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKA 136
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVV 365
+ GRE+H +K+G DV V N LI + S G E VF + + +DVV
Sbjct: 137 CARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVV 196
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQL 424
SW +MIS Y S + A++ + + +GS+ PDE+T+ S LS C LG LDLG K+H L
Sbjct: 197 SWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGL 256
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+G + + + ++LIDMYSKC I+ A +VF +IP +N + WTS+I G ++ EA
Sbjct: 257 FTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEA 316
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FR+M + ++ T+ +LSAC GAL G+ IH + R + D NAL+ M
Sbjct: 317 IELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGM 376
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM---IDSKGNWRK 599
Y +CG ++ A F+ + D+ +W+ +++G A G+ A F +M D + N
Sbjct: 377 YSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEIT 436
Query: 600 LMGLFRKC 607
+G+ C
Sbjct: 437 FLGVLCAC 444
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 200/410 (48%), Gaps = 10/410 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGG 170
+G +HS K HL V + NA +S F G + A VF + RD+ SWN +I G
Sbjct: 145 KGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISG 204
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y ++ ++ AL ++ + G + PD T L CG + L GK++H G+
Sbjct: 205 YLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVL 264
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V ++LI MY KCG + AR VFD +P R+ + W +MI+GY ++ + + + LF M+
Sbjct: 265 DVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQ 324
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
D T++ V+SA G GR +H Y + D++ N LI MY G+ +
Sbjct: 325 IGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQ 384
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSAC 409
+ ++F + D+ SW+ +IS + DKA+ + ME + P+EIT VL AC
Sbjct: 385 KALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCAC 444
Query: 410 ACLGNLDLGI-KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
G +D G+ + + L I ++D+ + + +A + +P +V+
Sbjct: 445 NHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVI 504
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSACARIG 513
W S++ R N+ + E F K + L+P V L ++ ++ +R G
Sbjct: 505 WRSLLFACR-NHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWG 553
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 132/246 (53%), Gaps = 3/246 (1%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS ++ + E ALK + + + + ++ DE LV+ + +C D G +H + +
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFT 258
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ L V +G++ + M+ K G + A VF ++ R+ W +I GYA++ F EA+
Sbjct: 259 GSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIE 318
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L++ M +GG D T CVL CG L +G+ +H++ R E D++ NALI MY
Sbjct: 319 LFREM-QIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMY 377
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
KCGD+ +A +F G+ + D SW+A+ISG NGE K L LF M + + P+ +T
Sbjct: 378 SKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITF 437
Query: 302 SSVISA 307
V+ A
Sbjct: 438 LGVLCA 443
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
++A++ MQ D + ++ C +G ++H + + + NA
Sbjct: 313 FKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNA 372
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K GD+ A +F + D+FSW+ +I G A G D+AL L+ +M + ++P
Sbjct: 373 LIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRP 432
Query: 196 DVYTFPCVLRTC--GGVPD 212
+ TF VL C GG D
Sbjct: 433 NEITFLGVLCACNHGGFVD 451
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 281/550 (51%), Gaps = 14/550 (2%)
Query: 50 LNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
L N+SS TK SR+ ELC G L A++ L+S I + +L++ C
Sbjct: 17 LTPSNSSSAPTKQ--SRILELCKLGQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVF 74
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLI 168
+ GL H+ V K+ +GN+ LS++ K G D+ VF M +D SW ++
Sbjct: 75 SFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMM 134
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
GY + +AL ++ M G ++P+ +T ++ C + +++ G+ H VI G+
Sbjct: 135 SGYVASKEHVKALEVFVEMVSFG-LQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGF 193
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
E + + + L MY + V AR VFD MP+ D I W A++S + +N Y + L LF
Sbjct: 194 EWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYA 253
Query: 289 M-REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M R + PD T +V++A + K G+E+HG +I G +V V + L+ MY G
Sbjct: 254 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSG 313
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E +VF+ M K++VSW+ ++ Y + +KA+E ++ ME + D +VL
Sbjct: 314 SVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK----DLYCFGTVLK 369
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
ACA L + LG ++H +R G +I+ + LID+Y K CID A V+ ++ +N+I+
Sbjct: 370 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMIT 429
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA-HA 525
W +++ L N R EA+ FF M+ +KP+ ++ +++L+AC G + G+ A A
Sbjct: 430 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMA 489
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG-YAERGQGAL 582
G+ + ++D+ R G + A N + E D S W +LL A ++
Sbjct: 490 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTDASSI 549
Query: 583 AEEFFRKMID 592
AE ++M++
Sbjct: 550 AERIAKRMME 559
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 201/393 (51%), Gaps = 21/393 (5%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF +M + D+ W ++ ++K ++EAL L+ M G+ PD TF VL CG
Sbjct: 216 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 275
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ LK+GKE+H +I G ++V V ++L+ MY K G + AR VF+GMP+++ +SW+A
Sbjct: 276 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSA 335
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
++ GY +NGE+ K + +F M E D +V+ A + +LG+E+HG ++ G
Sbjct: 336 LLGGYCQNGEHEKAIEMFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 391
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+V V + LI +Y G + +V+S+M +++++W M+S + ++AV +
Sbjct: 392 CFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFN 451
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-----LIDM 443
M +G PD I+ +VL+AC G ++ G L + SY I T +ID+
Sbjct: 452 DMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAK----SYGIKPGTEHYSCMIDL 507
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRKMMLNLKP----N 498
+ ++A + + +N S ++LG N ++ K M+ L+P +
Sbjct: 508 LGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAKRMMELEPKYHMS 567
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
V L ++ A R G + +I +R GVA
Sbjct: 568 YVLLSNMYKAIGRHGDAL---KIRKLMVRRGVA 597
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 235/446 (52%), Gaps = 26/446 (5%)
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+ F + +RD+++WN++I GY +AG E + + G+ PD TFP VL+ C V
Sbjct: 40 HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 99
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
D G ++H ++FG+ DV V +LI +Y + + AR++FD MP RD SWNAMI
Sbjct: 100 ID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 156
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
SGY ++G + L L +R + D +T+ S++SA GD G +H Y IK G
Sbjct: 157 SGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 212
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ + +KVF RM +D++SW ++I YE + P +A+ +Q M
Sbjct: 213 SEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKC 449
PD +T+ S+ S + LG++ + +R G + I I N ++ MY+K
Sbjct: 258 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 317
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILS 507
+D A VF+ +P+ +VISW +II G N + EA+ + M + N T VS+L
Sbjct: 318 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 377
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSA 566
AC++ GAL G ++H L+ G+ D F+ +L DMY +CGR++ A + F R +
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 437
Query: 567 WNILLTGYAERGQGALAEEFFRKMID 592
WN L+ + G G A F++M+D
Sbjct: 438 WNTLIACHGFHGHGEKAVMLFKEMLD 463
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 246/486 (50%), Gaps = 33/486 (6%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H + K V + + + ++ ++ +G+A +F +M RD+ SWN +I GY
Sbjct: 101 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 160
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G EAL+L G D T +L C D RG +H + I+ G E+++
Sbjct: 161 QSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 215
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
L + VFD M RD ISWN++I Y N + ++ + LF MR
Sbjct: 216 ---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 260
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREE 351
+ PD +TL S+ S +GD + R V G+ ++ G F +D+++ N ++ MY G +
Sbjct: 261 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 320
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACA 410
VF+ + + DV+SW T+IS Y + +A+E Y +ME EG + ++ T SVL AC+
Sbjct: 321 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 380
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L G+KLH ++ GL + + +L DMY KC ++ AL +F+QIP N + W +
Sbjct: 381 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 440
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHAL 526
+I + +A++ F++M+ +KP+ +T V++LSAC+ G + G+ E+
Sbjct: 441 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 500
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ---GA 581
I + + ++DMY R G+++ A S + D S W LL+ G G
Sbjct: 501 GITPSLKHY--GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 558
Query: 582 LAEEFF 587
+A E
Sbjct: 559 IASEHL 564
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 208/422 (49%), Gaps = 30/422 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +G+ ++AL + ++ + D +V+L+ C ++ G+ +HS
Sbjct: 153 NAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHS---- 204
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
S++ G ++ L VF +M RDL SWN +I Y A+SL
Sbjct: 205 ----YSIKHG-------LESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 253
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M + ++PD T + + D++ + V +R G + D+ + NA++ MY
Sbjct: 254 FQEMR-LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 312
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K G + AR VF+ +P D ISWN +ISGY +NG + + ++ IM E + + T
Sbjct: 313 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 372
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV+ A G + G ++HG ++K G DV V L MY G E+ +F ++
Sbjct: 373 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 432
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V W T+I+C+ +KAV ++ M EG PD IT ++LSAC+ G +D G
Sbjct: 433 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 492
Query: 422 HQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLR 476
++ M+T G+ + ++DMY + ++ AL+ + PD ++ W +++ R
Sbjct: 493 FEM-MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSACR 549
Query: 477 LN 478
++
Sbjct: 550 VH 551
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 32/282 (11%)
Query: 316 LGREVHGYVIKMGFSDDVSVCN-PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+G +V ++ FSD +CN P + ++S + F ++++DV +W MIS Y
Sbjct: 1 MGMKVKRLMMFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGY 60
Query: 375 EGSVLPDKAVETYQM-MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + + + + M + G PD T SVL AC + + G K+H LA++ G +
Sbjct: 61 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD 117
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF---FRK 490
+ +A +LI +YS+ K + A +F ++P +++ SW ++I G + + EAL R
Sbjct: 118 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 177
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-NALLD-MYVRCG 548
M +SVT+VS+LSAC G G IH+++++ G+ + + D MYV
Sbjct: 178 M------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYV--- 228
Query: 549 RMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
RD+ +WN ++ Y Q A F++M
Sbjct: 229 -------------RDLISWNSIIKAYELNEQPLRAISLFQEM 257
>gi|255543188|ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548618|gb|EEF50109.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 837
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 255/492 (51%), Gaps = 3/492 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L L G L++A ++L M + I V D+ NL +C + +G +H ++ +
Sbjct: 59 NVHLVSLSKQGKLKEAREFLKQMVDAGISVSPDSYRNLFEICGNSKSLSDGKIIHELLRR 118
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T+ SV L N L M+ L A+ VF KM +R+L SW +I YA+ G D+ALSL
Sbjct: 119 TVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKALSL 178
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M +G + P+ + +LR+ L GK++H H IR G A V + A+ MYV
Sbjct: 179 FISMISLG-INPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAISNMYV 237
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CG L A L + M +++ ++W ++ GY + G+ L LF M V+ D S
Sbjct: 238 RCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSI 297
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ A + + GR++HG+++K+G +VSV PL+ Y+ + E KVF + +
Sbjct: 298 SLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELASKVFEGISEPN 357
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW+ MI+ Y ++A++ ++ + + + T S+ AC+ L + G ++H
Sbjct: 358 DVSWSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHA 417
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++ LI+ + +I MYS+C +D A F I + ++WT+I+ G + E
Sbjct: 418 DAIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAWTAIVAGYAYQGNATE 477
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALL 541
AL F +M +PN++T +++L+AC+ G + GK+ + + + G+A + ++
Sbjct: 478 ALKHFWRMQGSGARPNAITFIAVLTACSHSGLVAEGKQYLDLMSSKYGMAPTIDHYDCVI 537
Query: 542 DMYVRCGRMKPA 553
D+Y R G ++ A
Sbjct: 538 DIYSRAGYLQEA 549
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 11/432 (2%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
NV + +K G EA ++M G V PD Y + CG L GK +H +
Sbjct: 59 NVHLVSLSKQGKLKEAREFLKQMVDAGISVSPDSYR--NLFEICGNSKSLSDGKIIHELL 116
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
R + V + N ++ MY C L A VFD M +R+ ISW +IS Y E+G K L
Sbjct: 117 RRTVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKAL 176
Query: 284 MLFIMMREVLVDPD---FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
LFI M + ++P+ ++ L + L+G +G+++H + I+ G VS+ +
Sbjct: 177 SLFISMISLGINPNSSIYIDLLRSLLNPSLLG---IGKQIHSHSIRSGLGAGVSINTAIS 233
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY+ G + E + M K+ V+WT ++ Y + A++ + M E DE
Sbjct: 234 NMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELDEY 293
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+ L ACA L L G ++H ++ GL S + + L+D Y KC + A +VF I
Sbjct: 294 VFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELASKVFEGI 353
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGK 519
+ N +SW+++I G EAL F + N++ NS T SI AC+ + G
Sbjct: 354 SEPNDVSWSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQACSALADFSTGT 413
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++HA A++ + +A++ MY RCGR+ A F + + D AW ++ GYA +G
Sbjct: 414 QVHADAIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAWTAIVAGYAYQG 473
Query: 579 QGALAEEFFRKM 590
A + F +M
Sbjct: 474 NATEALKHFWRM 485
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 198/386 (51%), Gaps = 6/386 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVR--LCEWKRGYDEGLYLHSVVSKTMSHLSV 130
+G L++AL SM L I + ++L+R L G + ++ HS+ S + +S+
Sbjct: 169 HGLLDKALSLFISMISLGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVSI 228
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
A +M+V+ G L A M +++ +W L+ GY +AG AL L+ +M
Sbjct: 229 N--TAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMV-C 285
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+ D Y F L+ C G+ +L G+++H H+++ G E++V V L+ Y+KC
Sbjct: 286 EDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFEL 345
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+G+ + + +SW+AMI+GY + GE+ + L +F +R + + + T +S+ A
Sbjct: 346 ASKVFEGISEPNDVSWSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQACSA 405
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ D G +VH IK + +I MY G + F ++ D V+WT +
Sbjct: 406 LADFSTGTQVHADAIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAWTAI 465
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTG 429
++ Y +A++ + M+ G+ P+ IT +VL+AC+ G + G + L ++ + G
Sbjct: 466 VAGYAYQGNATEALKHFWRMQGSGARPNAITFIAVLTACSHSGLVAEGKQYLDLMSSKYG 525
Query: 430 LISYIIIANTLIDMYSKCKCIDKALE 455
+ I + +ID+YS+ + +ALE
Sbjct: 526 MAPTIDHYDCVIDIYSRAGYLQEALE 551
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 5/207 (2%)
Query: 388 QMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
QM++A S+ PD + ++ C +L G +H+L RT + + NT++ MY
Sbjct: 80 QMVDAGISVSPD--SYRNLFEICGNSKSLSDGKIIHELLRRTVEKPSVFLENTVLKMYCV 137
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C+ ++ A +VF ++ ++N+ISW +II + +AL F M+ L + PNS + +
Sbjct: 138 CESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKALSLFISMISLGINPNSSIYIDL 197
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
L + L GK+IH+H++R G+ + A+ +MYVRCG + A N+ E++
Sbjct: 198 LRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNA 257
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
AW L+ GY + G+ A + F KM+
Sbjct: 258 VAWTGLMVGYTQAGKQKNALDLFAKMV 284
>gi|302773996|ref|XP_002970415.1| hypothetical protein SELMODRAFT_93286 [Selaginella moellendorffii]
gi|300161931|gb|EFJ28545.1| hypothetical protein SELMODRAFT_93286 [Selaginella moellendorffii]
Length = 581
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 235/445 (52%), Gaps = 19/445 (4%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++FSW+++I YA+ G F EAL L+Q M + G++P+ +T V+ C G+ D + +
Sbjct: 22 KNVFSWSIIISAYAQNGHFREALQLFQAMD-LEGMQPNSFTLSSVVAACSGLEDPLQARA 80
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H ++ G+ +D V A++ M+ +C G + A+ VFDGM R +SWNA+ISG G
Sbjct: 81 IHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDGMASRSIVSWNAVISGAIRGG 140
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
E + L L M PD TL++++SA V + RE H + GF ++V N
Sbjct: 141 EKDQALQLLWRMDNEGTKPDQFTLTTILSACSSV---RECREFHARIQASGFQAMLAVQN 197
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM- 396
L+ Y G+ + + VF M +DV+SWT +I+ Y + +A+ Y++ME
Sbjct: 198 ALMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHNDESREAIAIYELMEESARRS 257
Query: 397 -------PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
D +T A+ L C ++D G LH A GL + LI MYS+
Sbjct: 258 LSSLQPNADGVTFAAALGVCT--NHVDRGKSLHSFARDAGLDRENAVGAALIAMYSRSGR 315
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILS 507
+D+A F +I +K+V++W+S++ G +++ AL + +M+L + P+ T +IL
Sbjct: 316 LDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWRALQLYEEMILESEVLPDKFTFSTILG 375
Query: 508 ACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVS 565
CA +GA G+ +H+ L +G D L +L+DM+ +CG + A F+ ER+V
Sbjct: 376 VCAELGAAEEGRRVHSQMLACLGFERDAVLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQ 435
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
W L+ G A G+G A + R+M
Sbjct: 436 TWTTLVAGLARHGRGEQAVWWLRRM 460
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 246/514 (47%), Gaps = 24/514 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ +M + + L ++V C + +HS + +
Sbjct: 37 NGHFREALQLFQAMDLEGMQPNSFTLSSVVAACSGLEDPLQARAIHSRIVGAGFGSDEFV 96
Query: 133 GNAFLSMFVKF-GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
A ++MF + G A VF M R + SWN +I G + G D+AL L RM
Sbjct: 97 ATAMVAMFSRCDGCWIDAKAVFDGMASRSIVSWNAVISGAIRGGEKDQALQLLWRMD-NE 155
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G KPD +T +L C V + + E H + G++A + V NAL+ Y KCG L A
Sbjct: 156 GTKPDQFTLTTILSACSSVRECR---EFHARIQASGFQAMLAVQNALMDCYGKCGSLRDA 212
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE--------VLVDPDFMTLSS 303
++VFD M +RD ISW +I+ Y N E + + ++ +M E + + D +T ++
Sbjct: 213 KMVFDEMVERDVISWTCLIASYVHNDESREAIAIYELMEESARRSLSSLQPNADGVTFAA 272
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ D G+ +H + G + +V LI MY G +E F ++ K
Sbjct: 273 ALGVCTNHVDR--GKSLHSFARDAGLDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKS 330
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLH 422
VV+W+++++ Y +A++ Y+ M E +PD+ T +++L CA LG + G ++H
Sbjct: 331 VVAWSSLMTGYAQQGKNWRALQLYEEMILESEVLPDKFTFSTILGVCAELGAAEEGRRVH 390
Query: 423 -QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
Q+ G ++ +LIDM++KC ID A VF + ++NV +WT+++ GL + R
Sbjct: 391 SQMLACLGFERDAVLGTSLIDMFAKCGNIDAAKLVFDGMLERNVQTWTTLVAGLARHGRG 450
Query: 482 FEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLP 537
+A+ + R+M M + T+ +IL C G + G+ + I + + +
Sbjct: 451 EQAVWWLRRMSMEGFCADQATVTTILHGCNHGGLIDAGRCCFRLAGGEYGIQASCEHY-- 508
Query: 538 NALLDMYVRCGRMKPAWNQFNSNERDVSAWNILL 571
+ ++D+ R GR+K A + D + W ILL
Sbjct: 509 DCVVDLLGRAGRLKDA-ESLAAAMDDQAPWRILL 541
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 190/363 (52%), Gaps = 17/363 (4%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRI-SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC +V AR VFD + R + SW+ +IS Y +NG + + L LF M + P+
Sbjct: 1 MYGKCRSVVEARQVFDALGWRKNVFSWSIIISAYAQNGHFREALQLFQAMDLEGMQPNSF 60
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF-GNREEGEKVFSR 358
TLSSV++A + D R +H ++ GF D V ++ M+ G + + VF
Sbjct: 61 TLSSVVAACSGLEDPLQARAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDG 120
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M S+ +VSW +IS D+A++ M+ EG+ PD+ T+ ++LSAC+ +
Sbjct: 121 MASRSIVSWNAVISGAIRGGEKDQALQLLWRMDNEGTKPDQFTLTTILSACSSVRECR-- 178
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ H +G + + + N L+D Y KC + A VF ++ +++VISWT +I N
Sbjct: 179 -EFHARIQASGFQAMLAVQNALMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHN 237
Query: 479 NRSFEALIFF-------RKMMLNLKPNS--VTLVSILSACARIGALMCGKEIHAHALRIG 529
+ S EA+ + R+ + +L+PN+ VT + L C + GK +H+ A G
Sbjct: 238 DESREAIAIYELMEESARRSLSSLQPNADGVTFAAALGVC--TNHVDRGKSLHSFARDAG 295
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + + AL+ MY R GR+ AW F E+ V AW+ L+TGYA++G+ A + +
Sbjct: 296 LDRENAVGAALIAMYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWRALQLYE 355
Query: 589 KMI 591
+MI
Sbjct: 356 EMI 358
>gi|242040057|ref|XP_002467423.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
gi|241921277|gb|EER94421.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
Length = 682
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 266/538 (49%), Gaps = 12/538 (2%)
Query: 71 CLNGSLEQ-ALKYLDSMQELNICVDEDALVNLVRLCE---WKRGYDEGLYLHSVVSKTMS 126
C+ LE A L M+E ++ + AL +LV CE W+ G G +H++ K
Sbjct: 16 CVRCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHKAGL 75
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+V +G A L + G + +A +F +M R++ SW L+ + G +EAL Y+R
Sbjct: 76 MGNVYIGTALLHLCGSRGLVSNAQRLFWEMPQRNVVSWTALMVALSSNGCMEEALVAYRR 135
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M GV + V+ CG + D G +V HV+ G V V N+L+TM+
Sbjct: 136 MR-KEGVMCNANALATVVSLCGSLEDEAAGLQVTAHVVVSGLLTHVSVANSLLTMFGNLR 194
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A +FD M +RDRISWNAMIS Y Y K M+ MR V V PD TL S++S
Sbjct: 195 RVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFMVLSDMRHVGVRPDVTTLCSLVS 254
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ LG +H + G V + N L+ MY + G +E E +F M +DV+S
Sbjct: 255 VCASLDLVALGSGIHSLCVTSGLHSSVPLSNALVNMYSAAGKLDEAESLFWNMSRRDVIS 314
Query: 367 WTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W TMIS Y S +A+ T Q+++ + P+ +T +S L AC+ L G +H +
Sbjct: 315 WNTMISSYVQSNSCVEALGTLGQLLQTDEGPPNYMTFSSALGACSSPEALMNGRTIHAMI 374
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ L + ++I N+L+ MYSKC ++ A VF +P +V+S + G A+
Sbjct: 375 LQRSLQNVLLIGNSLLTMYSKCNTMEDAERVFQSMPCYDVVSCNVLTGGYATLEDVANAM 434
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNALLDM 543
F M +KPN +T++++ G L G +HA+ + G+ D ++ N+L+ M
Sbjct: 435 RVFSWMRGTGIKPNYITMINLQGTFKSSGDLHSYGMPLHAYITQTGLLSDEYVTNSLITM 494
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL 600
Y CG ++ + + F N + +WN ++ G+G EE + +DS+ KL
Sbjct: 495 YATCGDLESSTDIFCRINNKSAISWNAIIAANVRHGRG---EEALKLFMDSRHAGNKL 549
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 266/546 (48%), Gaps = 15/546 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL--HSVVSKTMSHLSV 130
NG +E+AL M++ + + +AL +V LC GL + H VVS ++H+SV
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGSLEDEAAGLQVTAHVVVSGLLTHVSV 182
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N+ L+MF + A +F +M +RD SWN +I Y+ + + + M V
Sbjct: 183 --ANSLLTMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFMVLSDMRHV 240
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G V+PDV T ++ C + + G +H + G + V + NAL+ MY G L
Sbjct: 241 G-VRPDVTTLCSLVSVCASLDLVALGSGIHSLCVTSGLHSSVPLSNALVNMYSAAGKLDE 299
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLSSVISASE 309
A +F M +RD ISWN MIS Y ++ ++ L L +++ P++MT SS + A
Sbjct: 300 AESLFWNMSRRDVISWNTMISSYVQSNSCVEALGTLGQLLQTDEGPPNYMTFSSALGACS 359
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +H +++ + + + N L+ MY E+ E+VF M DVVS
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNTMEDAERVFQSMPCYDVVSCNV 419
Query: 370 MISCYEGSVLPD--KAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAM 426
+ Y + L D A+ + M G P+ IT+ ++ G+L G+ LH
Sbjct: 420 LTGGY--ATLEDVANAMRVFSWMRGTGIKPNYITMINLQGTFKSSGDLHSYGMPLHAYIT 477
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL- 485
+TGL+S + N+LI MY+ C ++ + ++F +I +K+ ISW +II + R EAL
Sbjct: 478 QTGLLSDEYVTNSLITMYATCGDLESSTDIFCRINNKSAISWNAIIAANVRHGRGEEALK 537
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+F K + L LS+ A + +L G ++H +++ G+ +D + NA +DMY
Sbjct: 538 LFMDSRHAGNKLDRFCLAECLSSSASLASLEEGMQLHGLSVKSGLDYDSHVVNAAMDMYG 597
Query: 546 RCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMG 602
+CG+M + R WN L++GYA G AE+ F+ M+ K ++ +
Sbjct: 598 KCGKMDCMLKMLPDPACRPTQCWNTLISGYARYGYFKEAEDTFKHMVSLGQKPDYVTFVA 657
Query: 603 LFRKCQ 608
L C
Sbjct: 658 LLSACS 663
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 208/433 (48%), Gaps = 2/433 (0%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L M+ + + D L +LV +C G +HS+ + H SV L NA ++M+
Sbjct: 234 LSDMRHVGVRPDVTTLCSLVSVCASLDLVALGSGIHSLCVTSGLHSSVPLSNALVNMYSA 293
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G L A +F M RD+ SWN +I Y ++ EAL ++ P+ TF
Sbjct: 294 AGKLDEAESLFWNMSRRDVISWNTMISSYVQSNSCVEALGTLGQLLQTDEGPPNYMTFSS 353
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L C L G+ +H +++ + + + N+L+TMY KC + A VF MP D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNTMEDAERVFQSMPCYD 413
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD-EKLGREVH 321
+S N + GY + + +F MR + P+++T+ ++ + GD G +H
Sbjct: 414 VVSCNVLTGGYATLEDVANAMRVFSWMRGTGIKPNYITMINLQGTFKSSGDLHSYGMPLH 473
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
Y+ + G D V N LI MY + G+ E +F R+ +K +SW +I+ +
Sbjct: 474 AYITQTGLLSDEYVTNSLITMYATCGDLESSTDIFCRINNKSAISWNAIIAANVRHGRGE 533
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A++ + G+ D +A LS+ A L +L+ G++LH L++++GL + N +
Sbjct: 534 EALKLFMDSRHAGNKLDRFCLAECLSSSASLASLEEGMQLHGLSVKSGLDYDSHVVNAAM 593
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY KC +D L++ + W ++I G EA F+ M+ L KP+ V
Sbjct: 594 DMYGKCGKMDCMLKMLPDPACRPTQCWNTLISGYARYGYFKEAEDTFKHMVSLGQKPDYV 653
Query: 501 TLVSILSACARIG 513
T V++LSAC+ G
Sbjct: 654 TFVALLSACSHAG 666
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 210/441 (47%), Gaps = 7/441 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPD 212
M R SW I G + G A +L R+ V + ++ C G
Sbjct: 1 MPHRTSSSWYTAISGCVRCGLESTAFTLL-RVMRERDVPLSGFALASLVTACEHRGWQEG 59
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
G +H + G +V + AL+ + G + A+ +F MP+R+ +SW A++
Sbjct: 60 AACGAAIHALTHKAGLMGNVYIGTALLHLCGSRGLVSNAQRLFWEMPQRNVVSWTALMVA 119
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
NG + L+ + MR+ V + L++V+S + DE G +V +V+ G
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGSLEDEAAGLQVTAHVVVSGLLTH 179
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
VSV N L+ M+ + ++ E++F RME +D +SW MIS Y + K M
Sbjct: 180 VSVANSLLTMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFMVLSDMRH 239
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD T+ S++S CA L + LG +H L + +GL S + ++N L++MYS +D+
Sbjct: 240 VGVRPDVTTLCSLVSVCASLDLVALGSGIHSLCVTSGLHSSVPLSNALVNMYSAAGKLDE 299
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACA 510
A +F + ++VISW ++I +N EAL +++ + PN +T S L AC+
Sbjct: 300 AESLFWNMSRRDVISWNTMISSYVQSNSCVEALGTLGQLLQTDEGPPNYMTFSSALGACS 359
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
ALM G+ IHA L+ + + N+LL MY +C M+ A F S DV + N+
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNTMEDAERVFQSMPCYDVVSCNV 419
Query: 570 LLTGYAERGQGALAEEFFRKM 590
L GYA A A F M
Sbjct: 420 LTGGYATLEDVANAMRVFSWM 440
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 163/354 (46%), Gaps = 22/354 (6%)
Query: 74 GSLEQALK-------YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
G+L Q L+ Y+ L C +AL+N G +H+++ +
Sbjct: 333 GTLGQLLQTDEGPPNYMTFSSALGACSSPEALMN-------------GRTIHAMILQRSL 379
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ +GN+ L+M+ K + A VF M D+ S NVL GGYA A+ ++
Sbjct: 380 QNVLLIGNSLLTMYSKCNTMEDAERVFQSMPCYDVVSCNVLTGGYATLEDVANAMRVFSW 439
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M G +KP+ T + T DL G +H ++ + G +D V N+LITMY C
Sbjct: 440 MRGTG-IKPNYITMINLQGTFKSSGDLHSYGMPLHAYITQTGLLSDEYVTNSLITMYATC 498
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GDL + +F + + ISWNA+I+ +G + L LF+ R D L+ +
Sbjct: 499 GDLESSTDIFCRINNKSAISWNAIIAANVRHGRGEEALKLFMDSRHAGNKLDRFCLAECL 558
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S+S + + G ++HG +K G D V N + MY G + K+ +
Sbjct: 559 SSSASLASLEEGMQLHGLSVKSGLDYDSHVVNAAMDMYGKCGKMDCMLKMLPDPACRPTQ 618
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
W T+IS Y +A +T++ M + G PD +T ++LSAC+ G +D G+
Sbjct: 619 CWNTLISGYARYGYFKEAEDTFKHMVSLGQKPDYVTFVALLSACSHAGLIDKGM 672
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/554 (29%), Positives = 280/554 (50%), Gaps = 12/554 (2%)
Query: 62 NPNSRLNELCLNGSLEQALKYLD-SMQELNIC-VDEDALVNLVRLCEWKRGYDEGLYLHS 119
PN L N + AL++LD + L + +D A L++ C + G +H+
Sbjct: 15 QPNVPLRR---NLAANAALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHA 71
Query: 120 VVSKT--MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
V + ++ L N L+++ K G L A +F M +R++ S+ L+ GYA G F
Sbjct: 72 RVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGF 131
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+EA L++R+ G + + + +L+ + +H + G++ + V ++
Sbjct: 132 EEAAGLFRRL-QREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSS 190
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI Y CG + AR VFDG+ +D ++W AM+S Y EN L F MR P+
Sbjct: 191 LIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPN 250
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
L+SV+ A+ + LG+ +HG +K + V L+ MY G E+ VF
Sbjct: 251 PFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFE 310
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ DV+ W+ +IS Y S ++A E + M +P+E +++ VL ACA + LDL
Sbjct: 311 IIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDL 370
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H L ++ G S + + N L+D+Y+KC+ ++ +LE+F + D N +SW +II+G
Sbjct: 371 GQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQ 430
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+ + +AL F++M ++ VT S+L ACA ++ +IH+ + D +
Sbjct: 431 SGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV 490
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDS 593
N+L+D Y +CG ++ A F S + DV +WN +++GYA G+ A E F +M D+
Sbjct: 491 CNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDT 550
Query: 594 KGNWRKLMGLFRKC 607
K N + L C
Sbjct: 551 KPNDVTFVALLSVC 564
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 221/432 (51%), Gaps = 17/432 (3%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L ++ ++ + +D L + C K G+D ++ G++ + +
Sbjct: 153 LTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFV---------------GSSLIDAYSL 197
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G + HA VF + +D +W ++ Y++ ++AL+ + +M + G KP+ +
Sbjct: 198 CGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKM-RMAGAKPNPFVLTS 256
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ + GK +H ++ + + V AL+ MY KCG + AR VF+ +P D
Sbjct: 257 VLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDD 316
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I W+ +IS Y ++ + + +F+ M V P+ +LS V+ A V LG+++H
Sbjct: 317 VILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHN 376
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
VIK+G+ ++ V N L+ +Y N E ++F + + VSW T+I Y S +
Sbjct: 377 LVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAED 436
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ +Q M A + ++T +SVL ACA ++ +++H L ++ + I+ N+LID
Sbjct: 437 ALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLID 496
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
Y+KC CI AL+VF I +V+SW +II G L+ R+ +AL F +M + KPN VT
Sbjct: 497 TYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVT 556
Query: 502 LVSILSACARIG 513
V++LS C G
Sbjct: 557 FVALLSVCGSTG 568
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 1/308 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H KT+ +G A L M+ K G + A VF + D+ W+ LI YA+
Sbjct: 270 GKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ 329
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ ++A ++ RM V P+ ++ VL+ C V L G+++H VI+ GYE+++
Sbjct: 330 SYQNEQAFEMFLRMMR-SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELF 388
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ +Y KC ++ + +F + + +SWN +I GY ++G L +F MR
Sbjct: 389 VGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAH 448
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V +T SSV+ A K ++H + K F++D VCN LI Y G +
Sbjct: 449 VLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDAL 508
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + DVVSW +IS Y A+E + M + P+++T ++LS C G
Sbjct: 509 KVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTG 568
Query: 414 NLDLGIKL 421
++ G+ L
Sbjct: 569 LVNQGLSL 576
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 4/238 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQA + M ++ +E +L +++ C D G +H++V K + +GNA
Sbjct: 334 EQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNAL 393
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ ++ K ++ ++ +F + D + SWN +I GY ++GF ++ALS++Q M +
Sbjct: 394 MDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQ 453
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
V TF VLR C +K ++H + + + D V N+LI Y KCG + A VF+
Sbjct: 454 V-TFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFE 512
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD---FMTLSSVISASELV 311
+ + D +SWNA+ISGY +G L LF M + P+ F+ L SV ++ LV
Sbjct: 513 SIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLV 570
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C +G E AL M+ ++ + +++R C + +HS++ K+ +
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDT 488
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ + + K G + A VF + D+ SWN +I GYA G +AL L+ RM
Sbjct: 489 IVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMN-K 547
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRG 216
KP+ TF +L CG + +G
Sbjct: 548 SDTKPNDVTFVALLSVCGSTGLVNQG 573
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 287/599 (47%), Gaps = 75/599 (12%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
++ LC +G L++++ L M+ + + + L++ C ++R G +H+ + K
Sbjct: 1145 HISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNG 1204
Query: 126 SHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + K A +F ++ R++FSW ++G + GF ++AL
Sbjct: 1205 DFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLG 1264
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD + P VL+ CG + + GK VH +V++ G+ A V V ++L+ MY
Sbjct: 1265 FIEM-QENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYG 1323
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L AR VFD M +++ ++WN+MI GY +NG + + +F MR ++P +T++S
Sbjct: 1324 KCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVAS 1383
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SAS + G++ H I D + + +I Y G E+ E VFSRM KD
Sbjct: 1384 FLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 1443
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV+W +IS Y KA+ +M +E D +T++S+LSA A N+ LG + H
Sbjct: 1444 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHC 1503
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-------------------- 463
+R L S +++AN++IDMY+KC+ ID A +VF ++
Sbjct: 1504 YCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGE 1563
Query: 464 ---------------NVISWTSIILGLRLNNR---------------------------- 480
NVISW S+ILG N +
Sbjct: 1564 ALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLIS 1623
Query: 481 -------SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+EA++FF+KM ++P+ ++ S+L AC I +L G+ IH R
Sbjct: 1624 GLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCL 1683
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +L+DMY +CG + A F+ + +++ +N +++ YA GQ A F+ +
Sbjct: 1684 SVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHL 1742
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 211/433 (48%), Gaps = 48/433 (11%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
A NL L E K+G H++ L LG++ ++ + K G + A VF +
Sbjct: 1386 SASANLDALIEGKQG-------HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSR 1438
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M ++D+ +WN+LI Y + +AL++ M ++ D T +L ++K
Sbjct: 1439 MLEKDVVTWNLLISSYVQHHQVGKALNMCHLM-RSENLRFDSVTLSSILSASAVTSNIKL 1497
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GKE H + IR E+DV V N++I MY KC + AR VFD +RD + WN +++ Y +
Sbjct: 1498 GKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQ 1557
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G + L LF M+ V P+ ++ +SVI +GF
Sbjct: 1558 VGLSGEALKLFYQMQFDSVPPNVISWNSVI---------------------LGF------ 1590
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMES----KDVVSWTTMISCYEGSVLPDKAVETYQMME 391
L G E + +FS+M+S ++++WTT+IS S +A+ +Q M+
Sbjct: 1591 --------LRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQ 1642
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G P +I SVL AC + +L G +H R + +A +L+DMY+KC ID
Sbjct: 1643 EAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSID 1702
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
+A +VFH + K + + ++I L+ ++ EAL F+ + ++P+S+T SILSAC+
Sbjct: 1703 EAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACS 1762
Query: 511 RIGALMCGKEIHA 523
G + G + A
Sbjct: 1763 HAGLVNEGLNLFA 1775
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 21/231 (9%)
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM----CDRDLFSWNVLIGGYAKA 174
SV +S SV LG F++ G + A +F +M +L +W LI G A++
Sbjct: 1575 SVPPNVISWNSVILG------FLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQS 1628
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
GF EA+ +Q+M G++P + + VL C +P L G+ +H + R + V V
Sbjct: 1629 GFGYEAILFFQKM-QEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPV 1687
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+L+ MY KCG + A+ VF M ++ +NAMIS Y +G+ ++ L LF +++ +
Sbjct: 1688 ATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGI 1747
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV--CNPLIKMY 343
+PD +T +S++SA G G + F+D VS NP+++ Y
Sbjct: 1748 EPDSITFTSILSACSHAGLVNEGLNL--------FADMVSKHNMNPIMEHY 1790
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 264/520 (50%), Gaps = 20/520 (3%)
Query: 77 EQALKYLDSMQELNICVDEDA--LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
++AL +M+ ++ V D L +++ C G LH+ KT SV +G+
Sbjct: 88 DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGS 147
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ L M+ + G + + VF +M R+ +W +I G AG + E L+ + M +
Sbjct: 148 SLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL- 206
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D YTF L+ C G+ +K GK +H HVI G+ + V N+L TMY +CG++ +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ M +RD +SW ++I Y G+ +K + FI MR V P+ T +S+ SA +
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++H V+ +G +D +SV N ++KMY + GN +F M +D++SW+T+I Y
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++ + + M G+ P + +AS+LS + ++ G ++H LA+ GL
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK-MML 493
+ ++LI+MYSKC I +A +F + +++S T++I G + +S EA+ F K + +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVRCG 548
+P+SVT +S+L+AC G L G + +R G ++D+ R G
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG----CMVDLLCRAG 562
Query: 549 RMKPAWNQFN--SNERDVSAWNILL-----TGYAERGQGA 581
R+ A N S ++D W LL G ERG+ A
Sbjct: 563 RLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRA 602
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 232/459 (50%), Gaps = 3/459 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
N+ L + G+L A VF KM D+ SW +I Y A DEAL L+ M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD VL+ CG ++ G+ +H + ++ + V V ++L+ MY + G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MP R+ ++W A+I+G G Y +GL F M D T + + A +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G+ +H +VI GF + V N L MY G ++G +F M +DVVSWT++I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y+ KAVET+ M P+E T AS+ SACA L L G +LH + GL
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N+++ MYS C + A +F + +++ISW++II G E +F M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ KP L S+LS + + G+++HA AL G+ + + ++L++MY +CG +K
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 552 PAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRK 589
A F +R D+ + ++ GYAE G+ A + F K
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 188/382 (49%), Gaps = 5/382 (1%)
Query: 217 KEVHVHVIRFGYEADVDV-VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K V +++R + V N+ + + G+L AR VFD MP D +SW ++I Y
Sbjct: 24 KPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVT 83
Query: 276 NGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ L+LF MR V V PD LS V+ A + G +H Y +K V
Sbjct: 84 ANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSV 143
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+ MY G ++ +VFS M ++ V+WT +I+ + + + + M
Sbjct: 144 YVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRS 203
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+ D T A L ACA L + G +H + G ++ + +AN+L MY++C +
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
L +F + +++V+SWTS+I+ + + +A+ F KM + PN T S+ SACA +
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
L+ G+++H + L +G+ + N+++ MY CG + A F RD+ +W+ ++
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 572 TGYAERGQGALAEEFFRKMIDS 593
GY + G G ++F M S
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQS 405
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 6/277 (2%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA--EG 394
N ++ ++ GN +VF +M D+VSWT++I Y + D+A+ + M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD ++ VL AC N+ G LH A++T L+S + + ++L+DMY + IDK+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
VF ++P +N ++WT+II GL R E L +F +M + + ++ T L ACA +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLT 572
+ GK IH H + G + N+L MY CG M+ F N +ERDV +W L+
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 573 GYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
Y GQ A E F KM +S+ N + +F C
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 241/455 (52%), Gaps = 7/455 (1%)
Query: 140 FVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ FG A VF +++ N+ + ++ GF E L LY+ + G D
Sbjct: 86 YLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREVCAFG---SDN 142
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TFP V+R C V L+ GKEVH V+R G+ +V V AL+ MY K G + +R VFDG
Sbjct: 143 FTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDG 202
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M RD ISWNAMISGY NG ++ M++ P+ +L ++S +G G
Sbjct: 203 MKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAG 262
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+H + +K G D SV I MY +FG+ +F + ++VS +MIS
Sbjct: 263 DPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQH 322
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+KA +++M +G +P+ +T+ S+L C+ ++ G +H + ++ GL + +
Sbjct: 323 GAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVV 382
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
+ L+ MYSK +D A+ +F + +K+ + W S+I G +NN+ + R+M + +
Sbjct: 383 SALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVD 442
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+++T++S++S C L GK IHA+A+R + + + NALL MY CG++
Sbjct: 443 PDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKL 502
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F++ E R + +WN +++G+AE G FF +M
Sbjct: 503 FHTMEVRTLISWNTIISGFAENGDSVACLRFFCQM 537
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 273/534 (51%), Gaps = 10/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +G+ E+A M+ + + +V+++ C G + G +H +V K
Sbjct: 313 NSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIK 372
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + +A +SM+ K GDL A ++F + ++ WN LI GY ++ +
Sbjct: 373 FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGS 432
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + GV PD T V+ C DL GK +H + +R E + V+NAL+ MY
Sbjct: 433 VRRM-QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYA 491
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG L +F M R ISWN +ISG+ ENG+ + L F MR + D +TL +
Sbjct: 492 DCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIA 551
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+IS+ + D +G VH I+ G + DVSV N LI MY + G + GEK+F + S +
Sbjct: 552 LISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVN 611
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+S+ +++ Y + L + + + M P+ IT+ ++L C L G +H
Sbjct: 612 TISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPICH--SQLQ-GKTVHS 668
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A+R + + I MYS+ ++ +F + ++N I W +I+ ++
Sbjct: 669 YAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGV 728
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--NAL 540
A +FR++ LN+K ++VT+++++SAC+++G + + A AL+ G FDG + NAL
Sbjct: 729 AFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKG--FDGTIVVLNAL 786
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DM+ RCG + A F+ S E+D +W+ ++ Y+ G G A + F M+ +
Sbjct: 787 IDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVST 840
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 276/549 (50%), Gaps = 8/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG L +A + L MQ+ + +LV +V + D G LH+ K
Sbjct: 212 NAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALK 271
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + AF+SM+ FG L + +F + +L S N +I + G +++A +
Sbjct: 272 SGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGV 331
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ G+ P++ T +L C + G+ VH VI+FG V VV+AL++MY
Sbjct: 332 F-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYS 390
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GDL A +F + ++ ++ WN++ISGY N ++ + M+ VDPD +T+ S
Sbjct: 391 KLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVIS 450
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
VIS D +G+ +H Y ++ + SV N L+ MY G K+F ME +
Sbjct: 451 VISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRT 510
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW T+IS + + + + M D +T+ +++S+ + + ++ +G +H
Sbjct: 511 LISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHS 570
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA+R+G + +AN LI MY+ C I ++F + N IS+ +++ G R NN E
Sbjct: 571 LAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKE 630
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L F M+ N KPN +TL+++L C + + GK +H++A+R + L + +
Sbjct: 631 ILPLFYHMIKNDQKPNIITLLNLLPICH---SQLQGKTVHSYAIRNFSKLETSLFTSAIC 687
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRK 599
MY R ++ N F ER+ WN +L+ + Q +A ++FR++ ++ K +
Sbjct: 688 MYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVT 747
Query: 600 LMGLFRKCQ 608
++ L C
Sbjct: 748 MLALISACS 756
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 250/512 (48%), Gaps = 5/512 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C G +H V +T +V + A L M+ K G + + VF M RD
Sbjct: 148 VIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRD 207
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN +I GY+ G EA ++M G +P+ + ++ G+ G +H
Sbjct: 208 LISWNAMISGYSLNGCLLEAAEALKQM-QQDGFRPNASSLVGIVSMVSGLGVRDAGDPLH 266
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G D V A I+MY G L + +F + +S N+MIS ++G +
Sbjct: 267 AFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWE 326
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K +F +MR + P+ +T+ S++ G VHG VIK G ++ VSV + L+
Sbjct: 327 KAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALV 386
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ + +FS + K + W ++IS Y + + + + + M+ EG PD +
Sbjct: 387 SMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDAL 446
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ SV+S C +L +G +H A+R+ L + N L+ MY+ C + ++FH +
Sbjct: 447 TVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTM 506
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
+ +ISW +II G N S L FF +M L +++ + VTL++++S+ + I + G+
Sbjct: 507 EVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGE 566
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+H+ A+R G D + NAL+ MY CG ++ F+S + + ++N L+TGY +
Sbjct: 567 SVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNN 626
Query: 579 QGALAEEFFRKMI--DSKGNWRKLMGLFRKCQ 608
F MI D K N L+ L C
Sbjct: 627 LFKEILPLFYHMIKNDQKPNIITLLNLLPICH 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 234/471 (49%), Gaps = 16/471 (3%)
Query: 93 VDEDAL--VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAW 150
VD DAL ++++ C G +H+ ++ L+ + NA L+M+ G L
Sbjct: 441 VDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F M R L SWN +I G+A+ G L + +M + ++ D+ T ++ + +
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQM-RLADMQFDLVTLIALISSLSAI 559
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
D+ G+ VH IR G DV V NALITMY CG + +FD + + IS+NA++
Sbjct: 560 EDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALM 619
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+GY +N + + L LF M + P+ +TL +++ + + G+ VH Y I+
Sbjct: 620 TGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLL---PICHSQLQGKTVHSYAIRNFSK 676
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ S+ I MY F N E +F + ++ + W ++S A + ++ +
Sbjct: 677 LETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQI 736
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ D +T+ +++SAC+ LG DL + +A++ G I++ N LIDM+S+C I
Sbjct: 737 QFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSI 796
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSAC 509
A ++F +K+ +SW+++I ++ AL F M+ +KP+ +T VS+LSAC
Sbjct: 797 SFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSAC 856
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWN 555
+R G L G+ + R +A G P ++D+ R G + A++
Sbjct: 857 SRSGFLEQGRTL----FRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYD 903
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 188/412 (45%), Gaps = 5/412 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG L++ M+ ++ D L+ L+ G +HS+ +
Sbjct: 515 NTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIR 574
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +L V + NA ++M+ G + +F + + S+N L+ GY K F E L L
Sbjct: 575 SGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPL 634
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M KP++ T +L C +GK VH + IR + + + + I MY
Sbjct: 635 FYHMIK-NDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYS 690
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ +L +F + +R+ I WNA++S + + F ++ + V D +T+ +
Sbjct: 691 RFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLA 750
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ISA +G L V ++ GF + V N LI M+ G+ K+F KD
Sbjct: 751 LISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKD 810
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VSW+TMI+ Y A++ + MM + G PD+IT SVLSAC+ G L+ G L
Sbjct: 811 SVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFR 870
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G+ + ++D+ + +D+A ++ +P + S +LG
Sbjct: 871 SMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLG 922
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+D SV ++ YL FG VF+ +V + C+ + + Y+
Sbjct: 74 EDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYR 133
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
+ A GS D T V+ ACA + L LG ++H +RTG + + L+DMY+K
Sbjct: 134 EVCAFGS--DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSG 191
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+D + VF + +++ISW ++I G LN EA ++M + +PN+ +LV I+S
Sbjct: 192 QVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVS 251
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD-VSA 566
+ +G G +HA AL+ GV D + A + MY G + + + F+ + D + +
Sbjct: 252 MVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVS 311
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
N +++ + G A FR M
Sbjct: 312 CNSMISVCMQHGAWEKAFGVFRLM 335
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 216/380 (56%), Gaps = 2/380 (0%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G + +A +F + C D+F WN +I Y++ + + + +Y+ M W G V PD +TFP
Sbjct: 101 LGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTG-VHPDGFTFPY 159
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ C + D +H +I++G+ +DV V N L+ +Y KCG + A++VFDG+ R
Sbjct: 160 VLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRT 219
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW ++ISGY +NG+ ++ L +F MR V PD++ L S++ A V D + GR +HG
Sbjct: 220 IVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHG 279
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+VIKMG D+ ++ L Y G + F +M++ +V+ W MIS Y + ++
Sbjct: 280 FVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEE 339
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
AV + M + PD +T+ S + A A +G+L+L + ++ S I + +LID
Sbjct: 340 AVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLID 399
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
MY+KC ++ A VF + DK+V+ W+++I+G L+ + +EA+ + M + PN VT
Sbjct: 400 MYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVT 459
Query: 502 LVSILSACARIGALMCGKEI 521
+ +L+AC G + G E+
Sbjct: 460 FIGLLTACNHSGLVKEGWEL 479
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 186/375 (49%), Gaps = 2/375 (0%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G + + ++ L+ G + AR +FD D WNA+I Y N
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
Y + ++ MR V PD T V+ A + D L +HG +IK GF DV V N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ +Y G+ + VF + + +VSWT++IS Y + +A+ + M G P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D I + S+L A + +L+ G +H ++ GL + +L Y+KC + A F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
Q+ NVI W ++I G N + EA+ F M+ N+KP+SVT+ S + A A++G+L
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA 575
+ + + + D F+ +L+DMY +CG ++ A F+ N ++DV W+ ++ GY
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYG 433
Query: 576 ERGQGALAEEFFRKM 590
GQG A + M
Sbjct: 434 LHGQGWEAINLYHVM 448
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 176/349 (50%), Gaps = 2/349 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N ++++ K G +G A VF + R + SW +I GYA+ G EAL ++ +M
Sbjct: 189 VFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMR- 247
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GVKPD +LR V DL++G+ +H VI+ G E + ++ +L Y KCG +
Sbjct: 248 NNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVT 307
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ FD M + I WNAMISGY +NG + + LF M + PD +T+ S + AS
Sbjct: 308 VAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASA 367
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
VG +L + + YV K + D+ V LI MY G+ E +VF R KDVV W+
Sbjct: 368 QVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSA 427
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MI Y +A+ Y +M+ G P+++T +L+AC G + G +L
Sbjct: 428 MIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFE 487
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
++ + ++D+ + + +A +IP + V W +++ ++
Sbjct: 488 IVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKI 536
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H ++ G + + L+ + G K+F DV W +I Y +
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ VE Y+ M G PD T VL AC L + L +H ++ G S + + N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
L+ +Y+KC I A VF + + ++SWTSII G N ++ EAL F +M N +KP
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ + LVSIL A + L G+ IH +++G+ + L +L Y +CG + A + F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +V WN +++GYA+ G A F MI
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMI 348
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ M+ + D ALV+++R ++G +H V K L
Sbjct: 233 NGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPAL 292
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ + + K G + A F +M ++ WN +I GYAK G +EA++L+ M
Sbjct: 293 LISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMI-SRN 351
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD T + V L+ + + +V + Y +D+ V +LI MY KCG + AR
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD +D + W+AMI GY +G+ + + L+ +M++ V P+ +T +++A G
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471
Query: 313 DEKLGREV 320
K G E+
Sbjct: 472 LVKEGWEL 479
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 20/219 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDE---------DALVNLVRLCEWKRGYDEG 114
N+ ++ NG E+A+ M NI D A V + L +W Y
Sbjct: 325 NAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDY--- 381
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
VSK+ + + + + M+ K G + A VF + D+D+ W+ +I GY
Sbjct: 382 ------VSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLH 435
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G EA++LY M GV P+ TF +L C +K G E+ + F +
Sbjct: 436 GQGWEAINLYHVMK-QAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEH 494
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ ++ + + G L A +P +S W A++S
Sbjct: 495 YSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 246/462 (53%), Gaps = 6/462 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
L+ ++ G L A +F +M R++ +WNV+I G+AK ++EAL+ + +M GVK
Sbjct: 156 LNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMS-KHGVK 214
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
T VL + L G VH H I+ G+E+ + V ++LI MY KC AR V
Sbjct: 215 SSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQV 274
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + +++ I WNAM+ Y +NG + LF+ M + PD T +S++S
Sbjct: 275 FDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYL 334
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++GR++H +IK F+ ++ V N LI MY G +E K F M +D +SW +I Y
Sbjct: 335 EVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGY 394
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A ++ M +G +PDE+++AS+LSAC + L+ G + H L+++ GL + +
Sbjct: 395 VQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNL 454
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++LIDMYSKC I A + + +P+++V+S ++I G L N + +L
Sbjct: 455 FAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILG 514
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPA 553
LKP+ +T S++ C ++ G +IH ++ G+ FL +LL MY+ R+ A
Sbjct: 515 LKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADA 574
Query: 554 WNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F+ S+ + + W L++G+ + +A +R+M D+
Sbjct: 575 NILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDN 616
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 269/525 (51%), Gaps = 13/525 (2%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL + M + + L +++ + GL +H+ K S+ + ++
Sbjct: 199 EEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSL 258
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K A VF + +++ WN ++G Y++ GF + L+ M G+ PD
Sbjct: 259 INMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISC-GIHPD 317
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T+ +L TC L+ G+++H +I+ + +++ V NALI MY K G L A F+
Sbjct: 318 EFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFE 377
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASELVGD 313
M RD ISWNA+I GY + E G F + R +++D PD ++L+S++SA +
Sbjct: 378 HMTYRDHISWNAIIVGYVQE-EVEAG--AFSLFRRMILDGIVPDEVSLASILSACGNIKV 434
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G++ H +K+G ++ + LI MY G+ ++ K +S M + VVS +I+
Sbjct: 435 LEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAG 494
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-S 432
Y + ++ M+ G P EIT AS++ C + LG+++H ++ GL+
Sbjct: 495 YALKNTKE-SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCG 553
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +L+ MY + + A +F + K+++ WT++I G N S AL +R+M
Sbjct: 554 SEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREM 613
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
N+ P+ T V++L ACA + +L G+EIH+ G D +AL+DMY +CG +
Sbjct: 614 RDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDV 673
Query: 551 KPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
K + F + ++DV +WN ++ G+A+ G A + F +M S
Sbjct: 674 KSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQS 718
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 275/581 (47%), Gaps = 39/581 (6%)
Query: 57 SIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
+I+ KN N+ L NG L ++ M I DE +++ C +
Sbjct: 277 AISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEV 336
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LHS + K ++ + NA + M+ K G L A F M RD SWN +I GY +
Sbjct: 337 GRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQ 396
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
A SL++RM + G+ PD + +L CG + L+ G++ H ++ G E ++
Sbjct: 397 EEVEAGAFSLFRRMI-LDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLF 455
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY-FENGEYMKGLMLFIMMREV 292
++LI MY KCGD+ A + MP+R +S NA+I+GY +N + + + L M+ +
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK--ESINLLHEMQIL 513
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREE 351
+ P +T +S+I + LG ++H ++K G + L+ MY+ +
Sbjct: 514 GLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLAD 573
Query: 352 GEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+FS S K +V WT +IS + + D A+ Y+ M PD+ T +VL ACA
Sbjct: 574 ANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACA 633
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
L +L G ++H L TG + ++ L+DMY+KC + +++VF ++ K+VISW
Sbjct: 634 LLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWN 693
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I+G N + AL F +M + + P+ VT + +L+AC+ G + G++I +
Sbjct: 694 SMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQI----FDV 749
Query: 529 GVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNSNERDVSA--WNILL-----TGYAE 576
V + G P ++D+ R G +K A + E + +A W LL G +
Sbjct: 750 MVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEK 809
Query: 577 RGQGALAE------------EFFRKMIDSKGNWRKLMGLFR 605
RGQ A + M + GNW + L R
Sbjct: 810 RGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRR 850
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 209/445 (46%), Gaps = 46/445 (10%)
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
G C + WN + G + E + + F G PD +TF L C + +L
Sbjct: 6 GVKCLLRVRQWNWRVQGTKH--YSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNL 63
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG--MPKRDRISWNAMIS 271
G+ VH VI+ G E+ ALI +Y KC L AR +F P +SW A+IS
Sbjct: 64 HLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALIS 123
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + G + L +F MR V PD + L +V++A
Sbjct: 124 GYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNA------------------------ 158
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
Y+S G ++ ++F +M ++VV+W MIS + + ++A+ +
Sbjct: 159 -----------YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQ 207
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G T+ASVLSA A L L+ G+ +H A++ G S I +A++LI+MY KC+
Sbjct: 208 MSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQM 267
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL--IFFRKMMLNLKPNSVTLVSILS 507
D A +VF I KN+I W + +LG+ N + +F + + P+ T SILS
Sbjct: 268 PDDARQVFDAISQKNMIVWNA-MLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILS 326
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
CA L G+++H+ ++ + F+ NAL+DMY + G +K A F RD +
Sbjct: 327 TCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHIS 386
Query: 567 WNILLTGYAERGQGALAEEFFRKMI 591
WN ++ GY + A A FR+MI
Sbjct: 387 WNAIIVGYVQEEVEAGAFSLFRRMI 411
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T LSACA++ L G+ +H+ ++ G+ F AL+ +Y +C + A
Sbjct: 45 PDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTI 104
Query: 557 FNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S +W L++GY + G A F KM +S
Sbjct: 105 FASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNS 144
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 254/493 (51%), Gaps = 12/493 (2%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
+R G +H + +T + ++ N ++ + K G L A +F + +D+ SWN L
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 168 IGGYAKAGFFDEALSLYQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
I GY++ G + ++ Q R + P+ YT + + + G++ H V++
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG---EYMKG 282
D+ V +L+ MY K G + VF MP+R+ +W+ M+SGY G E +K
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 283 LMLFIMMREVLVDPD--FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
LF+ +E D D F + S ++A+ VG LGR++H IK G V++ N L+
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVALSNALV 263
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY + E K+F ++ ++W+ M++ Y + +AV+ + M + G P E
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY 323
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI VL+AC+ + L+ G +LH ++ G ++ L+DMY+K C+ A + F +
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK 519
+++V WTS+I G N+ + EALI +R+M + PN T+ S+L AC+ + L GK
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
++H H ++ G + + +AL MY +CG ++ F + +DV +WN +++G + G
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 579 QGALAEEFFRKMI 591
QG A E F +M+
Sbjct: 504 QGDEALELFEEML 516
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 249/476 (52%), Gaps = 7/476 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H++V K S + + + + M+ K G + VF M +R+ ++W+ ++ GYA
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 174 AGFFDEALSLYQRMFWVGGVKPDV-YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G +EA+ ++ D Y F VL + + G+++H I+ G V
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ NAL+TMY KC L A +FD R+ I+W+AM++GY +NGE ++ + LF M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P T+ V++A + + G+++H +++K+GF + L+ MY G +
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ +DV WT++IS Y + ++A+ Y+ M+ G +P++ T+ASVL AC+ L
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+LG ++H ++ G + I + L MYSKC ++ VF + P+K+V+SW ++I
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
GL N + EAL F +M+ ++P+ VT V+I+SAC+ G + G + + + +
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIG 555
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSNERD--VSAWNILLTGYAERGQGALA 583
D + + ++D+ R G++K A S D + W ILL+ G+ L
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE- 375
GR VHG +I+ G S + N L+ Y G + +F+ + KDVVSW ++I+ Y
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 376 -GSVLPDKAV-ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
G + V + ++ M A+ +P+ T+A + A + L + +G + H L ++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + +L+ MY K ++ L+VF +P++N +W++++ G R EA+ F +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 494 NLKPNS---VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ S ++LS+ A + G++IH ++ G+ L NAL+ MY +C +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A F+S+ +R+ W+ ++TGY++ G+ A + F +M + K + ++G+ C
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P T+ L+ + NL G +H +RTG + I AN L++ Y+KC + KA +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 457 FHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
F+ I K+V+SW S+I G N + S+ + FR+M ++ PN+ TL I A + +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
+ G++ HA +++ D ++ +L+ MY + G ++ F ER+ W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
+GYA RG+ A + F + K
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREK 214
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
L P++ TL+ L+ ++ L+ G+ +H +R G + N L++ Y +CG++ A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 555 NQFNSNE-RDVSAWNILLTGYAERG---QGALAEEFFRKM--IDSKGNWRKLMGLFR 605
+ FN+ +DV +WN L+TGY++ G + FR+M D N L G+F+
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 258/501 (51%), Gaps = 3/501 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D+ +++ C G + ++ + L + + ++ + ++ G + A F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
KM D+D WNV+I GY + G D A+ L++ M KPD TF CVL +
Sbjct: 69 DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMM-SSEAKPDSVTFACVLSISCSEAMV 127
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+++H V+R G + V N L+T+Y K L AR +FD MP+ D + WN MI GY
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG MLF M + PD +T +S + + K +E+HGY+++ G DV
Sbjct: 188 VQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDV 247
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ + LI +Y + K+F+ D+V +T MIS Y + + A+E ++ + +
Sbjct: 248 YLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK 307
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+P+ +T +S+L ACA L + LG +LH ++ L + + +++MY+KC +D A
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLA 367
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
+F +I K+ I W SII + + EA+ FR+M M +K + VT+ + LSACA I
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILL 571
AL GKEIH ++ D F +AL++MY +CG++ A FN E++ AWN ++
Sbjct: 428 PALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSII 487
Query: 572 TGYAERGQGALAEEFFRKMID 592
Y G A + F M++
Sbjct: 488 AAYGYHGYLADSLALFHNMLE 508
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 258/533 (48%), Gaps = 5/533 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +N G + A+K M D ++ + + + G LH +V +
Sbjct: 80 NVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVR 139
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GN ++++ K LG A +F M DL WN +IGGY + GF D+A L
Sbjct: 140 SGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASML 199
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+KPD TF L + LK+ KE+H +++R G DV + +ALI +Y
Sbjct: 200 FNEMI-SAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYF 258
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC D V A +F+ K D + + AMISGY NG L +F + + + P+ +T SS
Sbjct: 259 KCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSS 318
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + KLGRE+HGY+IK + V + ++ MY G + +F R+ KD
Sbjct: 319 ILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKD 378
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ W ++I+ + P++A+ ++ M EG D +T+++ LSACA + L G ++H
Sbjct: 379 AICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHG 438
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ S + + LI+MY+KC ++ A VF+ + +KN ++W SII + +
Sbjct: 439 FMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLAD 498
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALL 541
+L F M+ ++P+ +T ++ILS+C G + G + G+ +
Sbjct: 499 SLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMA 558
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
D++ R G + A+ S S W LL G LAE R ++D
Sbjct: 559 DLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLD 611
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 213/401 (53%), Gaps = 2/401 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV PD YTFP V++ C G+ +++ GK + ++ G++ D+ V ++LI +Y G + A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R FD M +D + WN MI+GY + GE + LF M PD +T + V+S S
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR++HG V++ G V N L+ +Y + K+F M D+V W MI
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + D A + M + G PD IT S L + A +L ++H +R G+I
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + LID+Y KC+ A ++F+ +++ +T++I G LN + +AL FR +
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWL 304
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + PN++T SIL ACA + A+ G+E+H + ++ + + +A+++MY +CGR+
Sbjct: 305 LQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRL 364
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F + +D WN ++T +++ G+ A FR+M
Sbjct: 365 DLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQM 405
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD T VI + + +LG+ + +++MGF D+ V + LIK+Y G E+
Sbjct: 6 VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ F +M KD V W MI+ Y D A++ ++ M + + PD +T A VLS
Sbjct: 66 RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++ G +LH L +R+GL ++ NTL+ +YSK + + A ++F +P +++ W +I
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N +A + F +M+ +KP+S+T S L + A +L KEIH + +R GV
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D +L +AL+D+Y +C A FN S + D+ + +++GY G A E FR ++
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305
Query: 592 DSK 594
K
Sbjct: 306 QKK 308
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 191/385 (49%), Gaps = 4/385 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H + + L V L +A + ++ K D A +F D+ + +I GY G
Sbjct: 234 IHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGM 293
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+AL ++ R + P+ TF +L C G+ +K G+E+H ++I+ E V +
Sbjct: 294 NKDALEIF-RWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGS 352
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
A++ MY KCG L A L+F + +D I WN++I+ + ++G+ + + LF M V
Sbjct: 353 AIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKY 412
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T+S+ +SA + G+E+HG++IK F D+ + LI MY G VF
Sbjct: 413 DCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVF 472
Query: 357 SRMESKDVVSWTTMISCYE-GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
+ M+ K+ V+W ++I+ Y L D + M+E EG PD IT ++LS+C G +
Sbjct: 473 NLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLE-EGIQPDHITFLTILSSCGHAGQV 531
Query: 416 DLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G++ + + G+ + + + D++ + +D+A EV +P S +LG
Sbjct: 532 EDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLG 591
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNS 499
+ + E + +L+L+P +
Sbjct: 592 ACRVHGNVELAEVASRYLLDLEPKN 616
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 2/202 (0%)
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G PD+ T V+ C L N+ LG + + + G + +A++LI +Y+ CI+ A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
F ++ DK+ + W +I G S A+ F+ MM + KP+SVT +LS
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILL 571
+ G+++H +R G+ F + N L+ +Y + ++ A F+ + D+ WN ++
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184
Query: 572 TGYAERGQGALAEEFFRKMIDS 593
GY + G A F +MI +
Sbjct: 185 GGYVQNGFMDDASMLFNEMISA 206
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 262/510 (51%), Gaps = 30/510 (5%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V L++ C KR Y +H V KT H + + + ++++ K G++ A VF M
Sbjct: 68 VPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPR 127
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R++ +W L+ G+ + A+ ++Q M + G P +YT VL C + LK G +
Sbjct: 128 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSY-PSIYTLSAVLHACSSLQSLKLGDQ 186
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H ++I++ + D V +AL ++Y KCG L A F + +++ ISW + +S +NG
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+KGL LF+ M + P+ TL+S +S + +LG +V IK G+ ++ V N
Sbjct: 247 PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNS 306
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI---------------SCYEGSVLPDKA 383
L+ +YL G E + F+RM+ +V+W MI +C GS +A
Sbjct: 307 LLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS----EA 362
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ + + G PD T++SVLS C+ + ++ G ++H ++TG +S +I++ +LI M
Sbjct: 363 LKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 422
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTL 502
Y+KC I++A + F ++ + +I+WTS+I G + S +AL F M L ++PN+VT
Sbjct: 423 YNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTF 482
Query: 503 VSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
V +LSAC+ G + EI +I D + ++DM+VR GR++ A N
Sbjct: 483 VGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHY--ECMVDMFVRLGRLEQALNFIKK 540
Query: 560 NERDVSA--WNILLTGYAERGQGALAEEFF 587
+ S W+ + G R G L F+
Sbjct: 541 MNYEPSEFIWSNFIAGC--RSHGNLELGFY 568
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 206/385 (53%), Gaps = 13/385 (3%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH HV++ G + V++ L+ +Y KCG++ AR VF+ MP+R+ ++W ++ G+ +N +
Sbjct: 86 VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ +F M P TLS+V+ A + KLG + H Y+IK D SV +
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L +Y G E+ K FSR+ K+V+SWT+ +S + P K + + M +E P+
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPN 265
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E T+ S LS C + +L+LG ++ L ++ G S + + N+L+ +Y K I +A F+
Sbjct: 266 EFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFN 325
Query: 459 QIPDKNVISWTSIILG-----------LRLNNRSFEALIFFRKM-MLNLKPNSVTLVSIL 506
++ D ++++W ++I G L R EAL F K+ +KP+ TL S+L
Sbjct: 326 RMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVL 385
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVS 565
S C+R+ A+ G++IHA ++ G D + +L+ MY +CG ++ A F + R +
Sbjct: 386 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMI 445
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
AW ++TG+++ G A F M
Sbjct: 446 AWTSMITGFSQHGMSQQALHIFEDM 470
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ + L+ M +I +E L + + C + G + S+ K ++R+
Sbjct: 244 NGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRV 303
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF-----------DEAL 181
N+ L +++K G + A F +M D + +WN +I G+A+ EAL
Sbjct: 304 RNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEAL 363
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ ++ G+KPD++T VL C + +++G+++H I+ G+ +DV V +LI+M
Sbjct: 364 KIFSKLNQ-SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 422
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG + RA F M R I+W +MI+G+ ++G + L +F M V P+ +T
Sbjct: 423 YNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTF 482
Query: 302 SSVISASELVG 312
V+SA G
Sbjct: 483 VGVLSACSHAG 493
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C GS +ALK + + + D L +++ +C ++G +H+ KT V
Sbjct: 356 CQRGS--EALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 413
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ + +SM+ K G + A F +M R + +W +I G+++ G +AL +++ M +
Sbjct: 414 IVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDM-SL 472
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV+P+ TF VL C + + + ++ + +D ++ M+V+ G L
Sbjct: 473 AGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLE 532
Query: 250 RARLVFDGMP-KRDRISWNAMISGYFENG 277
+A M + W+ I+G +G
Sbjct: 533 QALNFIKKMNYEPSEFIWSNFIAGCRSHG 561
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 244/465 (52%), Gaps = 11/465 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + M+ K GDL A VF ++ R++ SW ++ G + GF + L L+ +M V
Sbjct: 171 NSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQ-DNV 229
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P YT V+ C + L +G+ +H VI+ G ++ + AL+ MYVKCG+L A+
Sbjct: 230 PPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQC 289
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD + D + W MI GY +NG + L LF+ + + P+ +T+++V+SAS + D
Sbjct: 290 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRD 349
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR +HG +K+G + V N L+ MY E ++F + +KDVV+W +M+S
Sbjct: 350 LSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSG 409
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + + + A+ ++ M +G PD I++ LSA CLG+L +G H A++ +S
Sbjct: 410 YAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN 469
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I ++ L+++Y+KC + A VF ++ D+N ++W ++I G + S ++ F +M+
Sbjct: 470 IYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLK 529
Query: 494 N-LKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + PN V SILS C+ G + K + A I + + ++D+ R G
Sbjct: 530 DGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHY--ACMVDVLARAGN 587
Query: 550 MKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ A +F N + D S W L G + EE ++M+
Sbjct: 588 LEEAL-EFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMM 631
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 205/397 (51%), Gaps = 14/397 (3%)
Query: 203 VLRTCGGVPDLKRGKE---VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+L +CG +P L+ H + G + L++ Y GDL AR+VFDG P
Sbjct: 35 LLPSCGTLPSLRVLHARLLTHTQGLLLG---SLRARTKLLSCYAALGDLASARMVFDGTP 91
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASELVGDEKL 316
+ D S+ M+ + + + + L MR P D LS + A D
Sbjct: 92 RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGY 151
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYE 375
G +H +K+G +D V N L+ MY G+ E KVF R+ ++VVSWT+M+S C +
Sbjct: 152 GTRLHCDAVKVGGADGF-VMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQ 210
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
D + + M + P E TIA+V++AC+ L L G +H ++ GL+S
Sbjct: 211 NGFAAD-GLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSF 269
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLN 494
I+ L+DMY KC ++ A VF ++ +++ WT++I+G N +AL +F K N
Sbjct: 270 ISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFAN 329
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ PNSVT+ ++LSA A++ L G+ IH A+++G+ + NAL+DMY +C + A
Sbjct: 330 IVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEAN 389
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F S + +DV AWN +L+GYAE A F++M
Sbjct: 390 RIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQM 426
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 210/448 (46%), Gaps = 7/448 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S L+ NG L + M++ N+ E + ++ C G +G ++H V K
Sbjct: 202 TSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIK 261
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + A L M+VK G+L A VF ++ DL W +I GY + G +AL L
Sbjct: 262 QGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRL 321
Query: 184 Y-QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ + F + P+ T VL + DL G+ +H ++ G VVNAL+ MY
Sbjct: 322 FLDKKF--ANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMY 379
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC + A +F + +D ++WN+M+SGY EN LMLF M PD +++
Sbjct: 380 AKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVV 439
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+SAS +GD +G+ HGY +K F ++ V L+ +Y G+ +VF M +
Sbjct: 440 HALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDR 499
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-L 421
+ V+W MI Y +++ + M +G P+++ S+LS C+ G + +
Sbjct: 500 NSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYF 559
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR 480
+A + + ++D+ ++ +++ALE +P + S W + + G L++R
Sbjct: 560 DSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSR 619
Query: 481 -SFEALIFFRKMMLNL-KPNSVTLVSIL 506
F R M+L+ +P+ L+S L
Sbjct: 620 LQFGEEAIKRMMVLHPERPDLYVLISNL 647
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 236/475 (49%), Gaps = 62/475 (13%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D+DL SWN ++ Y++ G +E L L+++M V+PD T+ +L C + L+ GK
Sbjct: 1 DKDLISWNSMVVAYSQHGHGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGK 56
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG-------------------- 257
EVH V R +++D + ALI MY KCG L AR VFDG
Sbjct: 57 EVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHG 116
Query: 258 -----------------------------MPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
M K+ +WNAMIS Y ++G+ K L+LF
Sbjct: 117 RAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQ 176
Query: 289 MREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V PD T SVI A S L EK GR V MG + + L+ +Y G
Sbjct: 177 MSLEGVKPDARTFVSVIGACSSLQALEK-GRAVEEQATSMGIEEGRTA---LLSLYAKCG 232
Query: 348 NREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
N E +F +++ K+VVSW +MI+ Y S +A+E Y++M+ EG PD+IT A L
Sbjct: 233 NLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGAL 292
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC G G+++H + + + + + +++MY+KC ++ A+ F ++ KN +
Sbjct: 293 GACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAV 352
Query: 467 SWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+W++++ + EAL ++ R + +P+ +TL L+AC+RIGAL GK IH+
Sbjct: 353 TWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRI 412
Query: 526 LRIGVAFDG-FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
+ FL N+LL+MY +CG + A F N RD +WN ++ G+A G
Sbjct: 413 QATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHG 467
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 217/425 (51%), Gaps = 10/425 (2%)
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M + + +WN +I YA+ G ++L L+ +M + GVKPD TF V+ C +
Sbjct: 143 FDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMS-LEGVKPDARTFVSVIGACSSLQA 201
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMIS 271
L++G+ V G E + AL+++Y KCG+L AR +FD + +++ +SWN+MI+
Sbjct: 202 LEKGRAVEEQATSMGIE---EGRTALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIA 258
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y ++G + L L+ +M+E V PD +T + + A G G E+H + +
Sbjct: 259 AYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRT 318
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
DV + ++ MY G E F +M K+ V+W+ M+ + +A++ Y M
Sbjct: 319 DVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMV 378
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCI 450
+EG P EIT+A L+AC+ +G L G +H T L + + + N+L++MY+KC C+
Sbjct: 379 SEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCL 438
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A +F + ++ SW +II+G + E L +M+ + + P+ VT +L AC
Sbjct: 439 AIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLAC 498
Query: 510 ARIGALMCGK-EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSA 566
+ G L G+ + + GVA D ++D+ R GR++ A +S E
Sbjct: 499 SHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMG 558
Query: 567 WNILL 571
W LL
Sbjct: 559 WTTLL 563
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 205/421 (48%), Gaps = 24/421 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ +G ++L M + D V+++ C + ++G V +
Sbjct: 155 NAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVSVIGACSSLQALEKG----RAVEE 210
Query: 124 TMSHLSVRLG-NAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEAL 181
+ + + G A LS++ K G+L A +F K+ R ++ SWN +I YA++G EAL
Sbjct: 211 QATSMGIEEGRTALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREAL 270
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY+ M GV+PD T+ L C +G E+H + DV + A++ M
Sbjct: 271 ELYELMK-EEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNM 329
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG+L A F+ M +++ ++W+AM+ + ++G + L L++ M P +TL
Sbjct: 330 YAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITL 389
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC----NPLIKMYLSFGNREEGEKVFS 357
+ ++A +G + G+ +H ++ ++ + C N L+ MY G +FS
Sbjct: 390 AGALAACSRIGALQEGKAIHS---RIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFS 446
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
++ +D SW T+I + D+ + + M +G PD +T A VL AC+ G LD
Sbjct: 447 NLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDR 506
Query: 418 GIKLHQLAMRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
G + H L+M + + + +T ++D+ S+ ++ A E+ H +P + + WT++
Sbjct: 507 G-RSHFLSME---MEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTL 562
Query: 472 I 472
+
Sbjct: 563 L 563
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 6/316 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G +AL+ + M+E + D+ + C G +G+ +HS +++
Sbjct: 254 NSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITE 313
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V L A ++M+ K G+L A F KM ++ +W+ ++G + + G+ EAL L
Sbjct: 314 SKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDL 373
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMY 242
Y RM G +P T L C + L+ GK +H + + + + N+L+ MY
Sbjct: 374 YLRMV-SEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 432
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG L A +F + +RD SWN +I G+ +G+ + L L M + VDPD++T +
Sbjct: 433 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFA 492
Query: 303 SVISASELVGDEKLGREVHGYVIKM--GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
V+ A G GR H ++M G + D ++ + G E E++ M
Sbjct: 493 CVLLACSHAGLLDRGRS-HFLSMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMP 551
Query: 361 -SKDVVSWTTMISCYE 375
+ WTT++ E
Sbjct: 552 YEPPAMGWTTLLGSSE 567
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 58/281 (20%)
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SW +M+ Y ++ +E ++ M+ E PD IT AS+L AC+ + L+LG ++
Sbjct: 2 KDLISWNSMVVAYSQHGHGEEMLELFRKMDVE---PDSITYASILGACSAMELLELGKEV 58
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H R+ S +A LI+MYSKC ++ A VF I + W ++I GL + R+
Sbjct: 59 HARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRA 118
Query: 482 FEALIFFRKM-------------------------------------------------- 491
EAL F +M
Sbjct: 119 REALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMS 178
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ +KP++ T VS++ AC+ + AL G+ + A +G+ +G ALL +Y +CG ++
Sbjct: 179 LEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIE-EG--RTALLSLYAKCGNLE 235
Query: 552 PAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A + F+ ++V +WN ++ YA+ G+G A E + M
Sbjct: 236 AARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELM 276
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
DK++ISW S+++ + E L FRKM +++P+S+T SIL AC+ + L GKE+
Sbjct: 1 DKDLISWNSMVVAYSQHGHGEEMLELFRKM--DVEPDSITYASILGACSAMELLELGKEV 58
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQG 580
HA R D L AL++MY +CG ++ A F+ + D S WN +++G + G+
Sbjct: 59 HARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRA 118
Query: 581 ALAEEFFRKM 590
A F +M
Sbjct: 119 REALGLFERM 128
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 266/529 (50%), Gaps = 23/529 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E AL+ M + N+ LV++V C EGL + V
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS-NLPMPEGLMMGKQVHA 226
Query: 124 ---TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
L+ + N ++M+ K G L + + G RDL +WN ++ + EA
Sbjct: 227 YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALI 239
L Y R + GV+PD +T VL C + L+ GKE+H + ++ G + + V +AL+
Sbjct: 287 LE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY C ++ R VFDGM R WNAMI+GY +N + L+LFI M E + +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++ V+ A G +HG+V+K G D V N L+ MY G + ++F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 359 MESKDVVSWTTMISCY------EGSVLPDKAVETYQMMEAEGS-----MPDEITIASVLS 407
ME +D+V+W TMI+ Y E ++L ++ + ++G+ P+ IT+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L L G ++H A++ L + + + + L+DMY+KC C+ + +VF QIP KNVI+
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHA 525
W II+ ++ EA+ R MM+ +KPN VT +S+ +AC+ G + G I +
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD---VSAWNILL 571
GV ++D+ R GR+K A+ N RD AW+ LL
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 283/552 (51%), Gaps = 24/552 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNA 135
E L Y+D M L I D A L++ + + G +H+ V K + SV + N
Sbjct: 80 EAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++++ K GD G + VF ++ +R+ SWN LI ++ AL ++ M V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEP 197
Query: 196 DVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+T V+ C +P L GK+VH + +R G E + ++N L+ MY K G L ++
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 256
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ RD ++WN ++S +N + ++ L M V+PD T+SSV+ A +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 313 DEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+E+H Y +K G D+ S V + L+ MY + G +VF M + + W MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y + +A+ + M E+ G + + T+A V+ AC G +H ++ GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ NTL+DMYS+ ID A+ +F ++ D+++++W ++I G + +AL+ K
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 491 MM------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
M ++LKPNS+TL++IL +CA + AL GKEIHA+A++ +A D + +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKG 595
AL+DMY +CG ++ + F+ +++V WN+++ Y G G A + R M+ K
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 596 NWRKLMGLFRKC 607
N + +F C
Sbjct: 617 NEVTFISVFAAC 628
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 16/431 (3%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W L+ ++ EA+ Y M V G+KPD Y FP +L+ + D++ GK++H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 224 IRFGYEAD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+FGY D V V N L+ +Y KCGD VFD + +R+++SWN++IS ++
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 283 LMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKL--GREVHGYVIKMGFSDDVSVCNPL 339
L F M + V+P TL SV++A S L E L G++VH Y ++ G + + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTL 242
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMP 397
+ MY G + + +D+V+W T++S C +L +A+E + M EG P
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL--EALEYLREMVLEGVEP 300
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEV 456
DE TI+SVL AC+ L L G +LH A++ G L + + L+DMY CK + V
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGA 514
F + D+ + W ++I G N EAL+ F M L NS T+ ++ AC R GA
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
+ IH ++ G+ D F+ N L+DMY R G++ A F E RD+ WN ++TG
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 574 Y--AERGQGAL 582
Y +E + AL
Sbjct: 481 YVFSEHHEDAL 491
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+S+ W ++ S L +AV TY M G PD ++L A A L +++LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 420 KLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H + G + + +ANTL+++Y KC +VF +I ++N +SW S+I L
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG---ALMCGKEIHAHALRIGVAFDG 534
+ AL FR M+ N++P+S TLVS+++AC+ + LM GK++HA+ LR G +
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ N L+ MY + G++ + S RD+ WN +L+ + Q A E+ R+M+
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
>gi|147844170|emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
Length = 730
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 218/402 (54%), Gaps = 6/402 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL LH+ V KT + V + N L+M+ K G A VF +M +++L SW+ +I GY +
Sbjct: 29 GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 88
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG A+ LY +MF V P+ Y F V+ C + L +G+++H ++FGYE+
Sbjct: 89 AGEPQMAIDLYSQMFLV----PNEYVFASVISACASLSALTQGQKIHSRSLKFGYESISF 144
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+LI+MY+KC A VF P+ + +S+NA+I+G+ EN + +G F +M +
Sbjct: 145 VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGFEFFKLMXQQG 204
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD V+ + K G E+H +K+ + N +I MY +E E
Sbjct: 205 LIPDRFAFMGVLGICTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAE 264
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACL 412
K F +E KDV+SW T+I+ K + ++ M E ++ PD+ T S L+ACA L
Sbjct: 265 KAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGL 324
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++ G ++H MRT L + + N L++MY+KC CI A ++F ++ N++SW +II
Sbjct: 325 ASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTII 384
Query: 473 LGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
G + A+ F +M + ++P+SVT + +L+AC G
Sbjct: 385 AGFGNHGLGERAVELFEQMNAIGIRPDSVTFIGLLTACNHAG 426
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 210/406 (51%), Gaps = 8/406 (1%)
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C V L+ G +H V++ G ++DV + N ++ MY KCG AR VFD M +++ +SW
Sbjct: 20 CDIVNALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSW 79
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
+AMISGY + GE + L+ M V P+ +SVISA + G+++H +K
Sbjct: 80 SAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSALTQGQKIHSRSLK 136
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G+ V N LI MY+ + VF+ + VS+ +I+ + + ++ E
Sbjct: 137 FGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGFEF 196
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+++M +G +PD VL C NL G +LH ++ L S I N +I MYS+
Sbjct: 197 FKLMXQQGLIPDRFAFMGVLGICTTTENLKRGTELHCQTVKLNLDSTPFIGNVIITMYSE 256
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVS 504
I +A + F I +K+VISW ++I + + L F+ M N++P+ T S
Sbjct: 257 LNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTS 316
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERD 563
L+ACA + ++ GK+IHAH +R + D + NAL++MY +CG + A++ F+ +
Sbjct: 317 ALAACAGLASMSHGKQIHAHLMRTSLYRDLGVDNALVNMYAKCGCIGYAYDIFSKMVHHN 376
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+ +WN ++ G+ G G A E F +M I + + +GL C
Sbjct: 377 LVSWNTIIAGFGNHGLGERAVELFEQMNAIGIRPDSVTFIGLLTAC 422
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 9/344 (2%)
Query: 54 NTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE 113
NT + N+ + N LE+ ++ M + + D A + ++ +C
Sbjct: 168 NTPEPNCVSYNALITGFVENQQLERGFEFFKLMXQQGLIPDRFAFMGVLGICTTTENLKR 227
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH K + +GN ++M+ + + A F + ++D+ SWN LI +
Sbjct: 228 GTELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSH 287
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ L +++ M V+PD +TF L C G+ + GK++H H++R D+
Sbjct: 288 CDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTSLYRDLG 347
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY KCG + A +F M + +SWN +I+G+ +G + + LF M +
Sbjct: 348 VDNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNAIG 407
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T +++A G L E Y+ K F +D V L+ G+ GE
Sbjct: 408 IRPDSVTFIGLLTACNHAG---LAEE---YMRKFPFWNDPVVLVSLLSASRLHGDVVIGE 461
Query: 354 KV---FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
++ +++ + + + Y + D E + ++ G
Sbjct: 462 RLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 505
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 266/529 (50%), Gaps = 23/529 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E AL+ M + N+ LV++V C EGL + V
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS-NLPMPEGLMMGKQVHA 226
Query: 124 ---TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
L+ + N ++M+ K G L + + G RDL +WN ++ + EA
Sbjct: 227 YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALI 239
L Y R + GV+PD +T VL C + L+ GKE+H + ++ G + + V +AL+
Sbjct: 287 LE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY C ++ R VFDGM R WNAMI+GY +N + L+LFI M E + +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++ V+ A G +HG+V+K G D V N L+ MY G + ++F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 359 MESKDVVSWTTMISCY------EGSVLPDKAVETYQMMEAEGS-----MPDEITIASVLS 407
ME +D+V+W TMI+ Y E ++L ++ + ++G+ P+ IT+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L L G ++H A++ L + + + + L+DMY+KC C+ + +VF QIP KNVI+
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHA 525
W II+ ++ EA+ R MM+ +KPN VT +S+ +AC+ G + G I +
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD---VSAWNILL 571
GV ++D+ R GR+K A+ N RD AW+ LL
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 283/552 (51%), Gaps = 24/552 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNA 135
E L Y+D M L I D A L++ + + G +H+ V K + SV + N
Sbjct: 80 EAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++++ K GD G + VF ++ +R+ SWN LI ++ AL ++ M V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEP 197
Query: 196 DVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+T V+ C +P L GK+VH + +R G E + ++N L+ MY K G L ++
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 256
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ RD ++WN ++S +N + ++ L M V+PD T+SSV+ A +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 313 DEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+E+H Y +K G D+ S V + L+ MY + G +VF M + + W MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y + +A+ + M E+ G + + T+A V+ AC G +H ++ GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ NTL+DMYS+ ID A+ +F ++ D+++++W ++I G + +AL+ K
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 491 MM------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
M ++LKPNS+TL++IL +CA + AL GKEIHA+A++ +A D + +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKG 595
AL+DMY +CG ++ + F+ +++V WN+++ Y G G A + R M+ K
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 596 NWRKLMGLFRKC 607
N + +F C
Sbjct: 617 NEVTFISVFAAC 628
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 16/431 (3%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W L+ ++ EA+ Y M V G+KPD Y FP +L+ + D++ GK++H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 224 IRFGYEAD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+FGY D V V N L+ +Y KCGD VFD + +R+++SWN++IS ++
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 283 LMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKL--GREVHGYVIKMGFSDDVSVCNPL 339
L F M + V+P TL SV++A S L E L G++VH Y ++ G + + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTL 242
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMP 397
+ MY G + + +D+V+W T++S C +L +A+E + M EG P
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL--EALEYLREMVLEGVEP 300
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEV 456
DE TI+SVL AC+ L L G +LH A++ G L + + L+DMY CK + V
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGA 514
F + D+ + W ++I G N EAL+ F M L NS T+ ++ AC R GA
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
+ IH ++ G+ D F+ N L+DMY R G++ A F E RD+ WN ++TG
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 574 Y--AERGQGAL 582
Y +E + AL
Sbjct: 481 YVFSEHHEDAL 491
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+S+ W ++ S L +AV TY M G PD ++L A A L +++LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 420 KLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H + G + + +ANTL+++Y KC +VF +I ++N +SW S+I L
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG---ALMCGKEIHAHALRIGVAFDG 534
+ AL FR M+ N++P+S TLVS+++AC+ + LM GK++HA+ LR G +
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ N L+ MY + G++ + S RD+ WN +L+ + Q A E+ R+M+
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 238/446 (53%), Gaps = 3/446 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++A++ M+ I +++ +L+ G +H+ V K + + NA
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F++M++K + + W F M +L S N L+ G+ D+ + ++ V G +P
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLL-VEGFEP 189
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
++YTF +L+TC DL GK +H VI+ G D + N+L+ +Y KCG A VF
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+P+RD +SW A+I+G+ G Y GL +F M +P+ T S++ + + D
Sbjct: 250 GEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG++VH ++K + V L+ MY E+ E +F+R+ +D+ +WT +++ Y
Sbjct: 309 LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 368
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+KAV+ + M+ EG P+E T+AS LS C+ + LD G +LH +A++ G +
Sbjct: 369 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 428
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+A+ L+DMY+KC C++ A VF + ++ +SW +II G + + +AL F M+
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEG 488
Query: 495 LKPNSVTLVSILSACARIGALMCGKE 520
P+ VT + +LSAC+ +G + GK+
Sbjct: 489 TVPDEVTFIGVLSACSHMGLIEEGKK 514
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 243/466 (52%), Gaps = 8/466 (1%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L ++ ++++VK L A V +M +D+ WN + EA+ L+ M
Sbjct: 25 HLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHT 84
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
++ + + F ++ + D G+ +H V ++G+E+D+ + NA +TMY+K +
Sbjct: 85 R-IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVEN 143
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
F M + S N ++SG+ + +G + I + +P+ T S++
Sbjct: 144 GWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCAS 203
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
GD G+ +HG VIK G + D + N L+ +Y G+ KVF + +DVVSWT +
Sbjct: 204 KGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTAL 263
Query: 371 ISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
I+ + EG + + M AEG P+ T S+L +C+ L ++DLG ++H ++
Sbjct: 264 ITGFVAEGY---GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 320
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
L + L+DMY+K + ++ A +F+++ +++ +WT I+ G + + +A+ F
Sbjct: 321 SLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCF 380
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M +KPN TL S LS C+RI L G+++H+ A++ G + D F+ +AL+DMY +C
Sbjct: 381 IQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKC 440
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G ++ A F+ RD +WN ++ GY++ GQG A + F M+D
Sbjct: 441 GCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 203/384 (52%), Gaps = 4/384 (1%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+++++ C K +EG +H V K+ + L N+ ++++ K G +A VFG++
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
+RD+ SW LI G+ G+ L ++ +M G P++YTF +LR+C + D+ G
Sbjct: 253 PERDVVSWTALITGFVAEGY-GSGLRIFNQML-AEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K+VH +++ + + V AL+ MY K L A +F+ + KRD +W +++GY ++
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G+ K + FI M+ V P+ TL+S +S + GR++H IK G S D+ V
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ L+ MY G E+ E VF + S+D VSW T+I Y KA++ ++ M EG++
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 397 PDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PDE+T VLSAC+ +G ++ G K + L+ G+ I ++D+ + +
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 550
Query: 456 VFHQIP-DKNVISWTSIILGLRLN 478
++ NV+ W +++ +++
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMH 574
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 197/375 (52%), Gaps = 1/375 (0%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++ VI+ G D + ++L+ +YVKC L AR V + MP +D WN +S
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + LF +MR + + +S+ISA+ +GD G +H V K GF D+ +
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N + MY+ + E G + F M +++ S ++S + + D+ + EG
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P+ T S+L CA G+L+ G +H +++G+ + N+L+++Y+KC + A +V
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALM 516
F +IP+++V+SWT++I G IF + + PN T +SIL +C+ + +
Sbjct: 249 FGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
GK++HA ++ + + F+ AL+DMY + ++ A FN +RD+ AW +++ GYA
Sbjct: 309 LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 368
Query: 576 ERGQGALAEEFFRKM 590
+ GQG A + F +M
Sbjct: 369 QDGQGEKAVKCFIQM 383
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
++++R C D G +H+ + K + +G A + M+ K L A +F ++
Sbjct: 293 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 352
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
RDLF+W V++ GYA+ G ++A+ + +M GVKP+ +T L C + L G
Sbjct: 353 IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQM-QREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+++H I+ G D+ V +AL+ MY KCG + A +VFDG+ RD +SWN +I GY ++
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG------------------------ 312
G+ K L F M + PD +T V+SA +G
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 531
Query: 313 ----DEKLGR-----EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ LGR EV ++ +M + +V + ++ GN E GE+
Sbjct: 532 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER 582
>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 217/381 (56%), Gaps = 7/381 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-VKPDV 197
MF K G L + VF +D+ WN +I Y+++G EA+ L++ M V+P+
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T+ VL C V L++GKEVH ++ G++ D N+L+ MY KCG + AR VFDG
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R +SW +IS Y G + L L+ M V+P+ +T +SV+SA +G + G
Sbjct: 121 MKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEG 180
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ VH + G+ D++V N L+ +Y G+ + KVF RM+ ++VVSWT MIS Y
Sbjct: 181 KAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHH 240
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGLISYII 435
++A++ Y+ M+ P+ +T+ASVLSACA LGN + G +H+ + TGL + +
Sbjct: 241 RHSEEAIQLYKAMDV---APNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEV 297
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N L++MY+KC D A ++F + ++ +SW+++I + R EA+ R M L
Sbjct: 298 LQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEG 357
Query: 495 LKPNSVTLVSILSACARIGAL 515
++ +S ++L+AC++ G L
Sbjct: 358 VQASSFIYGTVLTACSQAGLL 378
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 200/355 (56%), Gaps = 7/355 (1%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDF 298
M+ KCG L +R VFD +D + WN+MI Y ++G + + LF M V+P+
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+T ++V++A V + G+EVH ++ GF D + N L+ MY G+ E +VF
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M+ + VVSWT +IS Y P +A++ Y+ M +EG P+ IT ASVLSAC+ LG L+ G
Sbjct: 121 MKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEG 180
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H G + +AN L+ +Y KC +D A +VF ++ +NV+SWT++I +
Sbjct: 181 KAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHH 240
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAH--ALRIGVAFDGFL 536
S EA+ ++ M ++ PN+VTL S+LSACA +G G+ +H + G+A D L
Sbjct: 241 RHSEEAIQLYKAM--DVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVL 298
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
NALL+MY +CG A F++ RD +W+ L+ Y + G+G A E R M
Sbjct: 299 QNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSM 353
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 218/462 (47%), Gaps = 23/462 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYDEGLYLHSVV 121
NS + +G +A++ SM + V+ +A+ ++ C ++G +H +
Sbjct: 27 NSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEALEQGKEVHRQM 86
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
N+ ++M+ K G + A VF M R + SW +I Y + G EAL
Sbjct: 87 VDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREAL 146
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY++M GV+P+ TF VL C + L+ GK VH + GY+ D+ V NAL+++
Sbjct: 147 DLYRKM-GSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSL 205
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG + AR VFD M R+ +SW AMIS Y + + + L+ M V P+ +TL
Sbjct: 206 YGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKAMD---VAPNAVTL 262
Query: 302 SSVISASELVGDEKLGREVHGYV--IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+SV+SA +G+ + GR VH + G + D + N L+ MY G+ + K+F M
Sbjct: 263 ASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIFDAM 322
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD--- 416
+D +SW+T+I+ Y +AVE + ME EG +VL+AC+ G L+
Sbjct: 323 AVRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEGVQASSFIYGTVLTACSQAGLLESAR 382
Query: 417 --LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIIL 473
G L Y+ +A L + + +A E+ +P + ++W ++
Sbjct: 383 HYFGCLTRDCGAPAKLEDYVCMATVL----GRAGRLAEAEELLAVMPFEAEFVAWMGLLA 438
Query: 474 GLRLNNR----SFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
+ +N + A + FR LN P V L +I A R
Sbjct: 439 ACKAHNDVERGARVAEVLFRLEPLNEAPY-VLLSNIYVAAGR 479
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 253/503 (50%), Gaps = 14/503 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + + S+ L N L+ + + G GHA + +M + S+N+LI Y++AG
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ +L + R GV+ D +T+ L C L+ GK VH + G V V N
Sbjct: 94 PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L++MY +CGD+ +AR VFD +RD +SWNA++SGY G L +F MMR +
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213
Query: 297 DFMTLSSVISASELVGDE--KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ L SVI D + VHG V+K GF DV + + ++ MY G E
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273
Query: 355 VFSRMESKDVVSWTTMIS--CYE----GSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+F + +VV + MI+ C + G+ + +A+ Y +++ G P E T +SV+ A
Sbjct: 274 LFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRA 333
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C G+++ G ++H ++ I + LID+Y C++ F +P ++V++W
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTW 393
Query: 469 TSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
T++I G N AL F +++ LKP+ T+ S+++ACA + G++I A +
Sbjct: 394 TAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATK 453
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEF 586
G + N+ + MY R G + A +F E D+ +W+ +++ +A+ G A F
Sbjct: 454 SGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRF 513
Query: 587 FRKMIDSK--GNWRKLMGLFRKC 607
F +M+D+K N +G+ C
Sbjct: 514 FNEMVDAKVVPNEITFLGVLTAC 536
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 214/393 (54%), Gaps = 10/393 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ +SM+ + GD+G A VF +RD SWN L+ GY +AG D+ L ++ M
Sbjct: 149 VFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFA-MMR 207
Query: 190 VGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G+ + + V++ C G D + VH V++ G+++DV + +A++ MY K G
Sbjct: 208 RSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGA 267
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYM------KGLMLFIMMREVLVDPDFMTL 301
L A +F + + + +NAMI+G + + + L L+ ++ ++P T
Sbjct: 268 LSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTF 327
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSVI A L GD + G+++HG V+K F D + + LI +YL+ G E+G + F+ +
Sbjct: 328 SSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPK 387
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV+WT MIS + L ++A+ + + G PD TI+SV++ACA L G ++
Sbjct: 388 QDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQI 447
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
A ++G + + N+ I MY++ + A+ F ++ +++SW+++I + +
Sbjct: 448 QCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCA 507
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+AL FF +M+ + PN +T + +L+AC+ G
Sbjct: 508 RDALRFFNEMVDAKVVPNEITFLGVLTACSHGG 540
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 20/440 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVVSKTMSHLSVR 131
G+ + L+ M+ I ++ AL ++++ C D +H V K V
Sbjct: 194 GAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVF 253
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK------AGFFDEALSLYQ 185
L +A + M+ K G L A +F + D ++ +N +I G + EALSLY
Sbjct: 254 LASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYS 313
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G++P +TF V+R C D++ GK++H V++ ++ D + +ALI +Y+
Sbjct: 314 EV-QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNS 372
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G + F +PK+D ++W AMISG +N + + L LF + + PD T+SSV+
Sbjct: 373 GCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVM 432
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+A + + G ++ + K GF ++ N I MY G+ + F MES D+V
Sbjct: 433 NACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIV 492
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW+ +IS + A+ + M +P+EIT VL+AC+ G +D G+K ++
Sbjct: 493 SWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETM 552
Query: 426 MRTGLISYIIIANT-LIDMYSKCKCIDKAL-----EVFHQIPDKNVISWTSIILGLRLNN 479
+S I T ++D+ + + A +FH P + W S++ R+ +
Sbjct: 553 KEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP----VIWRSLLASCRI-H 607
Query: 480 RSFEALIFFRKMMLNLKPNS 499
R E ++ L+P+S
Sbjct: 608 RDMERGQLVADRIMELQPSS 627
>gi|255544628|ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547283|gb|EEF48778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 922
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 265/495 (53%), Gaps = 10/495 (2%)
Query: 105 CEWKRGYDE------GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
C +++G+ + G LH++ K +++L V N ++M+ KFG + A YVF +M +
Sbjct: 217 CFYQKGFSQITKEAPGKALHALCIKGLANLGVFYNNTLINMYSKFGYICLARYVFDEMSE 276
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRGK 217
++ SWN +I Y AG + E++ L+ M +G +KP + F ++ C L G
Sbjct: 277 KNEASWNHIISAYLHAGLYRESIGLFNDMRDLG-IKPTGFAFASLVTACDRSGCMLSEGI 335
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+VH +++FG DV V +L+ Y G AR VF+ M ++ +SW A++ Y + G
Sbjct: 336 QVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSDFG 395
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ M+ + ++ MR + + TL++VIS+ + DE LG ++ G+VIK G +VSV N
Sbjct: 396 DPMEVMNIYCEMRCEGLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVEN 455
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI M+ SFG +E +F M D++SW +MIS Y + L ++++ + M+ +
Sbjct: 456 SLISMFGSFGRAQEACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHI 515
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T++++LS C + NL G +H L ++ G+ S I I NTLI MYS + A VF
Sbjct: 516 NSTTLSTLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVF 575
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALM 516
++ ++++ISW S++ + +S +AL IF R + N VT S L+AC+ +
Sbjct: 576 QKMAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIA 635
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYA 575
G+ +HA + G+ + NAL+ +Y + G A F + RD WN L+ G+A
Sbjct: 636 EGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHA 695
Query: 576 ERGQGALAEEFFRKM 590
+ A + F+ M
Sbjct: 696 NNRESDEAVKAFKLM 710
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 247/470 (52%), Gaps = 13/470 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + N+ +SMF FG A Y+FG M + D+ SWN +I Y + G F+E+L + +
Sbjct: 450 NVSVENSLISMFGSFGRAQEACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCF---Y 506
Query: 189 WVGGVKPDV--YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
W+ V + T +L CG V +LK G+ +H VI+FG ++++ + N LI MY G
Sbjct: 507 WMQHVHNHINSTTLSTLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAG 566
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A LVF M +RD ISWN+M++ Y ++G+ + L +F + + +F+T +S ++
Sbjct: 567 KSEHADLVFQKMAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALA 626
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A GR +H VI G + + V N L+ +Y G E +KVF M +D V+
Sbjct: 627 ACSDPDFIAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVT 686
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL---GIKLHQ 423
W +I + + D+AV+ +++M E ITIA+VL A L DL G+ +H
Sbjct: 687 WNALIGGHANNRESDEAVKAFKLMR-EDIPASYITIANVLGAL--LAPTDLLKHGMPIHA 743
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ GL S + N+LI MY+KC ++ + +F + +KN ++W +++ + + E
Sbjct: 744 YTVMIGLESDQYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAANAYHGQMEE 803
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+L KM + + + LSA A + L G+++ + A+++G D F+ NAL+D
Sbjct: 804 SLKLLVKMRHAGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMD 863
Query: 543 MYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
MY +CG + ER +WN L++ +A G A+E F +M+
Sbjct: 864 MYAKCGELDDVLRIIPQPLERSRLSWNTLISSFARHGNFERAKETFHEML 913
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 263/510 (51%), Gaps = 6/510 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVVSKTMSHLSVR 131
G +++ + M++L I A +LV C+ + G EG+ +H ++ K V
Sbjct: 293 GLYRESIGLFNDMRDLGIKPTGFAFASLVTACD-RSGCMLSEGIQVHDLIVKFGMLCDVF 351
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G + L + +G +A VF +M D+++ SW L+ Y+ G E +++Y M
Sbjct: 352 VGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEM-RCE 410
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ + T V+ +C + D G ++ HVI+ G +V V N+LI+M+ G A
Sbjct: 411 GLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEA 470
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F GM + D ISWN+MIS Y +NG + + L F M+ V + TLS+++S V
Sbjct: 471 CYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGSV 530
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ K GR +H VIK G ++ +CN LI MY G E + VF +M +D++SW +M+
Sbjct: 531 DNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSML 590
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+CY A++ + + + +T S L+AC+ + G LH L + TGL
Sbjct: 591 ACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIAEGRILHALVILTGLH 650
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+I++N L+ +Y+K +A +VF + ++ ++W ++I G N S EA+ F+ M
Sbjct: 651 ESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKLM 710
Query: 492 MLNLKPNSVTLVSILSA-CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
++ + +T+ ++L A A L G IHA+ + IG+ D ++ N+L+ MY +CG +
Sbjct: 711 REDIPASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDL 770
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+ F+ ++ AWN ++ A GQ
Sbjct: 771 NSSNCIFDGLINKNAVAWNTVMAANAYHGQ 800
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 214/418 (51%), Gaps = 19/418 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYL 117
NS ++ NG E++L+ MQ ++ ++ L L+ C +W RG +
Sbjct: 486 NSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGSVDNLKWGRG------I 539
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
HS+V K ++ + N ++M+ G HA VF KM +RDL SWN ++ YA+ G
Sbjct: 540 HSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSMLACYAQDGKS 599
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL ++ R+F + + TF L C + G+ +H VI G + V NA
Sbjct: 600 LDALKIFTRIFHMKK-GANFVTFTSALAACSDPDFIAEGRILHALVILTGLHESLIVSNA 658
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+T+Y K G + A+ VF M +RD ++WNA+I G+ N E + + F +MRE +
Sbjct: 659 LVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKLMRED-IPAS 717
Query: 298 FMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++T+++V+ A D K G +H Y + +G D V N LI MY G+ +F
Sbjct: 718 YITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSSNCIF 777
Query: 357 SRMESKDVVSWTTMISC--YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+ +K+ V+W T+++ Y G + +++++ M G D+ + + LSA A L
Sbjct: 778 DGLINKNAVAWNTVMAANAYHGQM--EESLKLLVKMRHAGVDLDQFSFSGCLSATATLAM 835
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+ G +L LA++ G S + N L+DMY+KC +D L + Q +++ +SW ++I
Sbjct: 836 LEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQPLERSRLSWNTLI 893
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 197/383 (51%), Gaps = 5/383 (1%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK +H I+ V N LI MY K G + AR VFD M +++ SWN +IS Y
Sbjct: 232 GKALHALCIKGLANLGVFYNNTLINMYSKFGYICLARYVFDEMSEKNEASWNHIISAYLH 291
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVS 334
G Y + + LF MR++ + P +S+++A + G G +VH ++K G DV
Sbjct: 292 AGLYRESIGLFNDMRDLGIKPTGFAFASLVTACDRSGCMLSEGIQVHDLIVKFGMLCDVF 351
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ Y ++G +VF+ M K+VVSWT ++ Y P + + Y M EG
Sbjct: 352 VGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEMRCEG 411
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ T+A+V+S+CA L + LG ++ +++GL + + + N+LI M+ +A
Sbjct: 412 LSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEAC 471
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALI--FFRKMMLNLKPNSVTLVSILSACARI 512
+F + + ++ISW S+I + + N FE + F+ ++ NS TL ++LS C +
Sbjct: 472 YIFGGMNEHDIISWNSMI-SVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGSV 530
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L G+ IH+ ++ G+ + + N L+ MY G+ + A F ERD+ +WN +L
Sbjct: 531 DNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSML 590
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
YA+ G+ A + F ++ K
Sbjct: 591 ACYAQDGKSLDALKIFTRIFHMK 613
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG LH++V T H S+ + NA ++++ K G A VF M RD +WN LIGG+A
Sbjct: 636 EGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHA 695
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEAD 231
DEA+ ++ M + T VL DL K G +H + + G E+D
Sbjct: 696 NNRESDEAVKAFKLM--REDIPASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESD 753
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V N+LITMY KCGDL + +FDG+ ++ ++WN +++ +G+ + L L + MR
Sbjct: 754 QYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAANAYHGQMEESLKLLVKMRH 813
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
VD D + S +SA+ + + G+++ +K+GF D V N L+ MY G ++
Sbjct: 814 AGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDD 873
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
++ + + +SW T+IS + ++A ET+ M G PD
Sbjct: 874 VLRIIPQPLERSRLSWNTLISSFARHGNFERAKETFHEMLKCGVTPDH 921
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 266/529 (50%), Gaps = 23/529 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E AL+ M + N+ LV++V C EGL + V
Sbjct: 81 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS-NLPMPEGLMMGKQVHA 139
Query: 124 ---TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
L+ + N ++M+ K G L + + G RDL +WN ++ + EA
Sbjct: 140 YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 199
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALI 239
L Y R + GV+PD +T VL C + L+ GKE+H + ++ G + + V +AL+
Sbjct: 200 LE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 258
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY C ++ R VFDGM R WNAMI+GY +N + L+LFI M E + +
Sbjct: 259 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 318
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++ V+ A G +HG+V+K G D V N L+ MY G + ++F +
Sbjct: 319 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 378
Query: 359 MESKDVVSWTTMISCY------EGSVLPDKAVETYQMMEAEGS-----MPDEITIASVLS 407
ME +D+V+W TMI+ Y E ++L ++ + ++G+ P+ IT+ ++L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L L G ++H A++ L + + + + L+DMY+KC C+ + +VF QIP KNVI+
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 498
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHA 525
W II+ ++ EA+ R MM+ +KPN VT +S+ +AC+ G + G I +
Sbjct: 499 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD---VSAWNILL 571
GV ++D+ R GR+K A+ N RD AW+ LL
Sbjct: 559 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 261/499 (52%), Gaps = 22/499 (4%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + N ++++ K GD G + VF ++ +R+ SWN LI ++ AL ++ M
Sbjct: 45 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 104
Query: 189 WVGGVKPDVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
V+P +T V+ C +P L GK+VH + +R G E + ++N L+ MY K
Sbjct: 105 -DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKL 162
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G L ++++ RD ++WN ++S +N + ++ L M V+PD T+SSV+
Sbjct: 163 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 222
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
A + + G+E+H Y +K G D+ S V + L+ MY + G +VF M + +
Sbjct: 223 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 282
Query: 365 VSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
W MI+ Y + +A+ + M E+ G + + T+A V+ AC G +H
Sbjct: 283 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 342
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ GL + NTL+DMYS+ ID A+ +F ++ D+++++W ++I G + +
Sbjct: 343 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED 402
Query: 484 ALIFFRKMM------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
AL+ KM ++LKPNS+TL++IL +CA + AL GKEIHA+A++ +A
Sbjct: 403 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 462
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + +AL+DMY +CG ++ + F+ +++V WN+++ Y G G A + R M
Sbjct: 463 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 522
Query: 591 I--DSKGNWRKLMGLFRKC 607
+ K N + +F C
Sbjct: 523 MVQGVKPNEVTFISVFAAC 541
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 215/403 (53%), Gaps = 15/403 (3%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD-VDVVNALITMYVKCGDLVR 250
G+KPD Y FP +L+ + D++ GK++H HV +FGY D V V N L+ +Y KCGD
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SE 309
VFD + +R+++SWN++IS ++ L F M + V+P TL SV++A S
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 310 LVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
L E L G++VH Y ++ G + + N L+ MY G + + +D+V+W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 368 TTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
T++S C +L +A+E + M EG PDE TI+SVL AC+ L L G +LH A
Sbjct: 184 NTVLSSLCQNEQLL--EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241
Query: 426 MRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
++ G L + + L+DMY CK + VF + D+ + W ++I G N EA
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301
Query: 485 LIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L+ F M L NS T+ ++ AC R GA + IH ++ G+ D F+ N L+D
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY--AERGQGAL 582
MY R G++ A F E RD+ WN ++TGY +E + AL
Sbjct: 362 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 404
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGR 549
++L +KP++ ++L A A + + GK+IHAH + G D + N L+++Y +CG
Sbjct: 2 IVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD 61
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ F+ +ER+ +WN L++ + +A E FR M+D
Sbjct: 62 FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 105
>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
Length = 917
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 282/563 (50%), Gaps = 20/563 (3%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLH 118
T + NS ++ NG E + Y M DE +L +++ C + G +H
Sbjct: 229 TTSWNSVISGSIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVH 288
Query: 119 SVVSKT--MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
S K S + N+ ++ + +FG A VF +R+L SWN +I G +
Sbjct: 289 SCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNER 348
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVV 235
EAL++ ++M +PDV T ++ C L G+ +H +VIR G + +
Sbjct: 349 VTEALAVLRQMRLEN--QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMG 406
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+L+ +Y+KC + A L+F MP+RD ISWN MISGY G + L M + +L +
Sbjct: 407 NSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQL--MFKGLLSE 464
Query: 296 PD---FMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREE 351
T+ +VI + + + G+ +H + +K GF S VS N LI MY+S G+
Sbjct: 465 GSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLA 524
Query: 352 GEKVFSRM-ESKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSA 408
+ R+ D++SW T+I C + + D A+E ++ M ++ PD ITI SVLSA
Sbjct: 525 AFSLIERIIPVSDIISWNTVIVGCLQNELHKD-ALEIFRFMYCSLAINPDSITIVSVLSA 583
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C L L LG +H + ++ S + + N+L+ MY + A VF+ + D N+ SW
Sbjct: 584 CGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSW 643
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G NN+ + AL F++KM + +PN +++V I+ AC ++G GK IH H R
Sbjct: 644 NCMISGFAQNNKGWRALQFYQKME-DFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRS 702
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFF 587
+ + F+ +L+DMY +CGR+ A F S E+ ++ WN L++ + G G + + F
Sbjct: 703 VLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLF 762
Query: 588 RKMIDS--KGNWRKLMGLFRKCQ 608
KM DS K + L C
Sbjct: 763 WKMHDSGMKATKSTFIALLSACS 785
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 254/505 (50%), Gaps = 13/505 (2%)
Query: 114 GLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G+ LH + +K+ + + NA + M+ K G+ A VF M RD SWN +I G
Sbjct: 181 GMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSI 240
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYE-- 229
G E + Y R +PD + VL C + DL G+ VH ++ GYE
Sbjct: 241 FNGL-AEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDT 299
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
A V N+L+T Y + G A+ VF R+ +SWNAMI G +N + L + M
Sbjct: 300 ASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQM 359
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGN 348
R + PD TL +++S G G +HGYVI+ G ++ S+ N L+ +YL
Sbjct: 360 R-LENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDE 418
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEG-SVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+F M +D++SW TMIS Y L ++A ++ + +EGS T+ +V+
Sbjct: 419 PSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIP 478
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQI-PDKNV 465
+C+ L G LH +++ G S + A N LI MY C A + +I P ++
Sbjct: 479 SCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDI 538
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
ISW ++I+G N +AL FR M L + P+S+T+VS+LSAC + L GK IH
Sbjct: 539 ISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHC 598
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
L+ A + + N+LL MY R G + A F S + ++ +WN +++G+A+ +G
Sbjct: 599 MILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWR 658
Query: 583 AEEFFRKMIDSKGNWRKLMGLFRKC 607
A +F++KM D + N ++G+ C
Sbjct: 659 ALQFYQKMEDFEPNEISVVGIICAC 683
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 221/444 (49%), Gaps = 18/444 (4%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ WN +G + +D+A +L++RM G + D T +L +L+RG E+
Sbjct: 126 DVILWNAAVGALTTSCRYDDAAALFRRMARELG-EFDSTTVVVMLSGASRAGNLRRGMEL 184
Query: 220 HVHVIRFGYEAD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + A + NAL+ MY KCG+ A +VF MP RD SWN++ISG NG
Sbjct: 185 HGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGL 244
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSD--DVSV 335
F M + PD ++LSSV+SA + D G VH +K+G+ D SV
Sbjct: 245 AEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSV 304
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ Y FG E +KVF+ ++++VSW MI + +A+ + M E +
Sbjct: 305 ANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLE-N 363
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKAL 454
PD T+ +++S CA G L G LH +R GL+ + N+L+D+Y KC A
Sbjct: 364 QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAG 423
Query: 455 EVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKPNSV-TLVSILSACARI 512
+F +P +++ISW ++I G R EA + F+ ++ S+ T+++++ +C+
Sbjct: 424 LLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIP 483
Query: 513 GALMCGKEIHAHALRIGVAFDGFLP-NALLDMYVRCGRMKPAWNQFNSNER-----DVSA 566
L GK +H+ +L+ G G NAL+ MY+ CG A F+ ER D+ +
Sbjct: 484 EELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAA---FSLIERIIPVSDIIS 540
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
WN ++ G + A E FR M
Sbjct: 541 WNTVIVGCLQNELHKDALEIFRFM 564
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 173/341 (50%), Gaps = 6/341 (1%)
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
D I WNA + + Y LF M L + D T+ ++S + G+ + G E+H
Sbjct: 126 DVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELH 185
Query: 322 GYVIKMGFSDD-VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
G K + N L+ MY G E VF M +D SW ++IS + L
Sbjct: 186 GMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLA 245
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRTGL--ISYIIIA 437
+ + ++ M PDE++++SVLSAC+ L +L G +H A++ G + +A
Sbjct: 246 EVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVA 305
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
N+L+ YS+ + A +VF ++N++SW ++I GL N R EAL R+M L +P
Sbjct: 306 NSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLENQP 365
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQ 556
+ TLV+I+S CA G L G+ +H + +R G+ + + N+LLD+Y++C A
Sbjct: 366 DVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLL 425
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
F + RD+ +WN +++GY+ G + K + S+G+
Sbjct: 426 FMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGS 466
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 179/370 (48%), Gaps = 12/370 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M++ GD A+ + ++ D+ SWN +I G + +AL +++ M+
Sbjct: 510 NALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIFRFMYCSLA 569
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD T VL CG + L GK +H +++ + +++ V N+L+TMY + GD A
Sbjct: 570 INPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAE 629
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
LVF M + SWN MISG+ +N + + L + M + +P+ +++ +I A +G
Sbjct: 630 LVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMED--FEPNEISVVGIICACTQLG 687
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+ +HG+V + ++V + L+ MY G + +VF K + W ++IS
Sbjct: 688 GYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLIS 747
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL-AMRTGLI 431
+ K+++ + M G + T ++LSAC+ G +D G K + L + + G+
Sbjct: 748 AFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLMSEKFGIT 807
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI----F 487
++DM + + +A + +P + T I G LN S + +
Sbjct: 808 PAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQ----THGIWGALLNACSSRSELKMGES 863
Query: 488 FRKMMLNLKP 497
K +L+L+P
Sbjct: 864 IAKHLLHLEP 873
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 263/542 (48%), Gaps = 38/542 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVS 122
NS + LC E +L M N+ LV++ C RG G +H+
Sbjct: 402 NSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTL 461
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ L NA ++M+ + G + A +FG +DL SWN +I ++ F+EAL
Sbjct: 462 RN-GDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL- 519
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALITM 241
+Y + V GV+PD T VL C + L+ G+E+H + +R G + V AL+ M
Sbjct: 520 MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDM 579
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMT 300
Y C + RLVFDG+ +R WNA+++GY N + L LF+ M+ E P+ T
Sbjct: 580 YCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATT 639
Query: 301 LSSVISASEL--VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+SV+ A V +K G +HGY++K GF D V N L+ MY G E + +F R
Sbjct: 640 FASVLPACVRCKVFSDKEG--IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGR 697
Query: 359 MESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGS-----------------MPDEI 400
M +D+VSW TMI+ C D ++M +G P+ +
Sbjct: 698 MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSV 757
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ +VL CA L L G ++H A++ L + + + L+DMY+KC C++ A VF Q+
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-------LKPNSVTLVSILSACARIG 513
P +NVI+W +I+ ++ + EAL FR M ++PN VT ++I +AC+ G
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 514 ALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW---NQFNSNERDVSAWNI 569
+ G + H GV G L+D+ R GR+K A+ N SN V AW+
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSS 937
Query: 570 LL 571
LL
Sbjct: 938 LL 939
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 223/422 (52%), Gaps = 9/422 (2%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R W L+ + F +A+S Y M PD + FP VL+ V DL GK+
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAML-AAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 219 VHVHVIRFGY--EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+H HV +FG+ + V V N+L+ MY KCGDL AR VFD +P RD +SWN+MI+
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSV 335
E+ L LF +M VDP TL SV A S + G +LG++VH Y ++ G
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYT 470
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ MY G + + +F + KD+VSW T+IS + ++A+ +M +G
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKAL 454
PD +T+ASVL AC+ L L +G ++H A+R G LI + L+DMY CK K
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACARI 512
VF + + V W +++ G N +AL F +M+ + PN+ T S+L AC R
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
+ IH + ++ G D ++ NAL+DMY R GR++ + F N+RD+ +WN ++
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710
Query: 572 TG 573
TG
Sbjct: 711 TG 712
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 252/496 (50%), Gaps = 25/496 (5%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + N+ ++M+ K GDL A VF + DRD SWN +I + ++ +L L+ R+
Sbjct: 366 SVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLF-RLM 424
Query: 189 WVGGVKPDVYTFPCVLRTCGGV-PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V P +T V C V ++ GK+VH + +R G + NAL+TMY + G
Sbjct: 425 LSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGR 483
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A+ +F +D +SWN +IS +N + + LM +M V PD +TL+SV+ A
Sbjct: 484 VNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPA 543
Query: 308 SELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ ++GRE+H Y ++ G ++ V L+ MY + ++G VF + + V
Sbjct: 544 CSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAV 603
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLA 425
W +++ Y + D+A+ + M +E P+ T ASVL AC +H
Sbjct: 604 WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYI 663
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ G + N L+DMYS+ ++ + +F ++ ++++SW ++I G + R +AL
Sbjct: 664 VKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDAL 723
Query: 486 IFFRKMM-------------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
+M + KPNSVTL+++L CA + AL GKEIHA+A+
Sbjct: 724 NLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 783
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
+ +A D + +AL+DMY +CG + A F+ R+V WN+L+ Y G+G A E
Sbjct: 784 KQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALE 843
Query: 586 FFRKMIDSKGNWRKLM 601
FR M G+ R+++
Sbjct: 844 LFRIMTAGGGSNREVI 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 174/339 (51%), Gaps = 9/339 (2%)
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+R W ++ + + + + M PD +V+ A+ V D LG++
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 320 VHGYVIKMGFS--DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+H +V K G + V+V N L+ MY G+ +VF + +D VSW +MI+
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTG-LISYII 435
+ ++ +++M +E P T+ SV AC+ + G + LG ++H +R G L +Y
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY-- 469
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
N L+ MY++ ++ A +F K+++SW ++I L N+R EAL++ M+++
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPA 553
++P+ VTL S+L AC+++ L G+EIH +ALR G + + F+ AL+DMY C + K
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ R V+ WN LL GYA A F +MI
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMI 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+E + W ++ S A+ TY M A + PD +VL A A + +L LG
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 419 IKLHQLAMRTGLI--SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
++H + G S + +AN+L++MY KC + A +VF IPD++ +SW S+I L
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 477 LNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARI-GALMCGKEIHAHALRIGVAFDG 534
+L FR M+ N+ P S TLVS+ AC+ + G + GK++HA+ LR G
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRT 468
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
+ NAL+ MY R GR+ A F + +D+ +WN +++ ++
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511
>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
Length = 705
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 269/521 (51%), Gaps = 41/521 (7%)
Query: 84 DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKF 143
D ++ D V ++ C R G +H+ + K+ H +V + N+ + M+ K
Sbjct: 31 DKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G + A +F M D+ + SW ++ G+ + G FDE +S++ RM ++P+ YT +
Sbjct: 91 GRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET--LQPNEYTLAVI 148
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C DLK + +H H+I+ G+ D + N+LI Y K G LV A + + RD
Sbjct: 149 LQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDV 208
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
+SW ++ISG NG K L+ F M+E V P+ +T+ S++ A L+ + ++ + VHG
Sbjct: 209 VSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGL 268
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
V+K + ++V V N L++MY G +EG ++F C+EG
Sbjct: 269 VMKAEWRENVFVMNSLVEMYSINGYFKEGFQIFCNF-------------CFEG------- 308
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+G TIA++L C+ L LG ++H ++ G I+ N+LI M
Sbjct: 309 ---------DGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYM 359
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-----LKPN 498
Y++ + D A ++F ++ ++++SW ++I L + S++AL+ ++ N + P+
Sbjct: 360 YAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPD 419
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
VT+++ + AC+ + +L G+ IH + R G+ D F+ N+L+DMY +CGR+ A +
Sbjct: 420 FVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLA--EKV 477
Query: 559 SNE---RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
S E RD+ +WN L+ Y G G A F+++ ++ +
Sbjct: 478 SEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAH 518
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 242/543 (44%), Gaps = 54/543 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S ++ C G+ ++ + M E + +E L +++ C KR +H + K
Sbjct: 112 TSMMSGHCQRGAFDEVISIFWRMLE-TLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIK 170
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + L N+ + + K G L A + ++ RD+ SW +I G G ++AL
Sbjct: 171 TGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLF 230
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV P+ T +L+ C + + + + VH V++ + +V V+N+L+ MY
Sbjct: 231 FFEM-QEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMYS 289
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
I+GYF+ G F + + D LS+
Sbjct: 290 --------------------------INGYFKEG--------FQIFCNFCFEGDGQYLST 315
Query: 304 VISASELVGDE-----KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
A+ L G KLG ++HGY IK GF V N LI MY + ++F +
Sbjct: 316 ETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRK 375
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS----MPDEITIASVLSACACLGN 414
M +D+VSW TMIS +A+ + + G PD +TI + + AC+ L +
Sbjct: 376 MSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLAS 435
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG +H R GLI I + N+L+DMY KC + A +V ++P +++ SW S+I
Sbjct: 436 LQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAA 495
Query: 475 LRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IG 529
+N AL F+++ +PN++T +ILSACA G + G EI R +
Sbjct: 496 YGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLE 555
Query: 530 VAFDGFLPNALLDMYVRCGRMK--PAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFF 587
+ F ++D+ R GR++ A+ Q E W LL G G +AE
Sbjct: 556 PRIEHF--ACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVA 613
Query: 588 RKM 590
+K+
Sbjct: 614 KKL 616
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/558 (29%), Positives = 276/558 (49%), Gaps = 60/558 (10%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
R L L+ E++ K+ +Q LN ALVN L + ++ +H+ S
Sbjct: 57 RQTSLNLHNREEESSKF-HFLQRLNPKFYISALVNCRNLTQVRQ-------VHAQASVHG 108
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
++ + N + + + L A+ +F MC RD SW+V++GG+AK G + ++
Sbjct: 109 MLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFR 168
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G +PD YT P V+R C + +L+ AL+ MYVKC
Sbjct: 169 ELIRCGA-RPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYVKC 206
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
++ AR +FD M +RD ++W MI GY E G+ + L+LF MRE V PD + + +V+
Sbjct: 207 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 266
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A +G R + Y+ + F DV + +I MY G E ++F RME K+V+
Sbjct: 267 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 326
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW+ MI+ Y KA++ ++MM + G +PD+IT+AS+L AC NL ++H A
Sbjct: 327 SWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQA 386
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII------------- 472
G++ +I+AN L+ YS + +D A +F + ++ +SW+ ++
Sbjct: 387 SVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCF 446
Query: 473 --------LGLRLNNRSF-------EALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
G R +N + E+L+ F KM + P+ V +V+++ ACA++GA+
Sbjct: 447 GTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 506
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
+ I + R D L A++DM+ +CG ++ A F+ E++V +W+ ++ Y
Sbjct: 507 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 566
Query: 576 ERGQGALAEEFFRKMIDS 593
GQG A + F M+ S
Sbjct: 567 YHGQGRKALDLFPMMLRS 584
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 244/487 (50%), Gaps = 41/487 (8%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A + M+VK ++ A ++F KM +RDL +W V+IGGYA+ G +E+L L+++M GV
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM-REEGVV 256
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD V+ C + + + + + ++ R ++ DV + A+I MY KCG + AR +
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M +++ ISW+AMI+ Y +G+ K L LF MM + PD +TL+S++ A +
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNL 376
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--- 371
R+VH G ++ V N L+ Y + ++ +F M +D VSW+ M+
Sbjct: 377 TQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF 436
Query: 372 -------SCY-------------EGSVLP-----DKAVETYQMMEAEGSMPDEITIASVL 406
+C+ + LP ++++ + M EG +PD++ + +V+
Sbjct: 437 AKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVV 496
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA LG + + R +I+ +IDM++KC C++ A E+F ++ +KNVI
Sbjct: 497 FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVI 556
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA-- 523
SW+++I + + +AL F M+ + + PN +TLVS+L AC+ G + G +
Sbjct: 557 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM 616
Query: 524 ---HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERG 578
+++R V ++D+ R GR+ A S E+D W L
Sbjct: 617 WEDYSVRADVKH----YTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHK 672
Query: 579 QGALAEE 585
LAE+
Sbjct: 673 DVVLAEK 679
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 276/550 (50%), Gaps = 20/550 (3%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD--EGLYLHSVVS 122
S+L C N +Q L LDS ++ L ++R G D G +LH +
Sbjct: 14 SQLLHQCRNIHHQQCLSALDSHSYAHM------LQQIIR-----NGADPIAGKHLHCHIL 62
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K + L + N L+ +V+ L A +F +M + S+ L GY++ F +AL
Sbjct: 63 KRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALH 122
Query: 183 LYQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
R+F G V P + F +L+ + +H V + G+ AD V ALI
Sbjct: 123 FILRIFKEGHEVNP--FVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA 180
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y G++ AR VFD + +D +SW M++ Y EN Y + L LF MR + P+ T+
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S + + + +G+ VHG +K + D+ V L+++Y G + +++F M
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D++ W+ MI+ Y S +A++ + M +P+ T ASVL ACA +LDLG ++
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ GL S + ++N ++D+Y+KC I+ ++++F ++PD+N ++W +II+G
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
A+ F M+ +++P VT S+L A A + AL G +IH+ ++ D + N+L
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL 480
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNW 597
+DMY +CGR+ A F+ N+RD +WN ++ GY+ G A F M D K N
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540
Query: 598 RKLMGLFRKC 607
+G+ C
Sbjct: 541 LTFVGVLSAC 550
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 224/404 (55%), Gaps = 2/404 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ V K H +G A + + G++ A +VF +C +D+ SW ++ YA+ F
Sbjct: 158 LHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCF 217
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
++E+L L+ +M + G KP+ +T L++C G+ GK VH ++ Y+ D+ V
Sbjct: 218 YEESLQLFNQM-RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGI 276
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ +Y K G+++ A+ +F+ MPK D I W+ MI+ Y ++ + L LF+ MR+ V P
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVP 336
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ T +SV+ A LG+++H V+K G + +V V N ++ +Y G E K+F
Sbjct: 337 NNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLF 396
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++ V+W T+I Y ++A+ + M P E+T +SVL A A L L+
Sbjct: 397 EELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALE 456
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G+++H L ++T ++AN+LIDMY+KC I+ A F ++ ++ +SW ++I G
Sbjct: 457 PGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYS 516
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
++ S EAL F M + KPN +T V +LSAC+ G L G+
Sbjct: 517 MHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 178/346 (51%), Gaps = 1/346 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E++L+ + M+ + + + ++ C ++ G +H K + +
Sbjct: 215 NCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFV 274
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L ++ K G++ A +F +M DL W+++I YA++ EAL L+ RM
Sbjct: 275 GIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTS- 333
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +TF VL+ C L GK++H V++FG ++V V NA++ +Y KCG++ +
Sbjct: 334 VVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSM 393
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +P R+ ++WN +I GY + G+ + + LF M E + P +T SSV+ AS +
Sbjct: 394 KLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLA 453
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G ++H IK ++ D V N LI MY G + F +M +D VSW MI
Sbjct: 454 ALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMIC 513
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y + +A+ + MM+ P+++T VLSAC+ G L G
Sbjct: 514 GYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 241/455 (52%), Gaps = 7/455 (1%)
Query: 140 FVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ FG A VF +++ N+ + ++ GF E L LY+ + G D
Sbjct: 86 YLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREVCAFG---SDN 142
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TFP V+R C V L+ GKEVH V+R G+ +V V AL+ MY K G + +R VFDG
Sbjct: 143 FTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDG 202
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M RD ISWNAMISGY NG ++ M++ P+ +L ++S +G G
Sbjct: 203 MKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAG 262
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+H + +K G D S+ I MY +FG+ +F + ++VS +MIS
Sbjct: 263 DPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQH 322
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+KA +++M +G +P+ +T+ S+L C+ ++ G +H + ++ GL + +
Sbjct: 323 GAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVV 382
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
+ L+ MYSK +D A+ +F + +K+ + W S+I G +NN+ + R+M + +
Sbjct: 383 SALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVD 442
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+++T++S++S C L GK IHA+A+R + + + NALL MY CG++
Sbjct: 443 PDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKL 502
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F++ E R + +WN +++G+AE G FF +M
Sbjct: 503 FHTMEVRTLISWNTIISGFAENGDSVACLRFFCQM 537
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 274/534 (51%), Gaps = 10/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ +G+ E+A M+ + + +V+++ C G + G +H +V K
Sbjct: 313 NSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIK 372
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + +A +SM+ K GDL A ++F + ++ WN LI GY ++ +
Sbjct: 373 FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGS 432
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + GV PD T V+ C DL GK +H + +R E + V+NAL+ MY
Sbjct: 433 VRRM-QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYA 491
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG L +F M R ISWN +ISG+ ENG+ + L F MR + D +TL +
Sbjct: 492 DCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIA 551
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+IS+ + D +G VH I+ G + DVSV N LI MY + G + GEK+F + S +
Sbjct: 552 LISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVN 611
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+S+ +++ Y + L ++ + + M P+ IT+ ++L C L G +H
Sbjct: 612 TISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPICH--SQLQ-GKTVHS 668
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A+R + + I MYS+ ++ +F + ++N I W +I+ ++
Sbjct: 669 YAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGV 728
Query: 484 ALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG--FLPNAL 540
A +FR++ LN+K ++VT+++++SAC+++G + + A AL+ G FDG + NAL
Sbjct: 729 AFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKG--FDGTIIVLNAL 786
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DM+ RCG + A F+ S E+D +W+ ++ Y+ G G A + F M+ S
Sbjct: 787 IDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSS 840
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 276/549 (50%), Gaps = 8/549 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ LNG L +A + L MQ+ + +LV +V + D G LH+ K
Sbjct: 212 NAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALK 271
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L AF+SM+ FG L + +F + +L S N +I + G +++A +
Sbjct: 272 SGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGV 331
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ G+ P++ T +L C + G+ VH VI+FG V VV+AL++MY
Sbjct: 332 F-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYS 390
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GDL A +F + ++ ++ WN++ISGY N ++ + M+ VDPD +T+ S
Sbjct: 391 KLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVIS 450
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
VIS D +G+ +H Y ++ + SV N L+ MY G K+F ME +
Sbjct: 451 VISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRT 510
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++SW T+IS + + + + M D +T+ +++S+ + + ++ +G +H
Sbjct: 511 LISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHS 570
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
LA+R+G + +AN LI MY+ C I ++F + N IS+ +++ G R NN E
Sbjct: 571 LAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEE 630
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L F M+ N KPN +TL+++L C + + GK +H++A+R + L + +
Sbjct: 631 ILPLFYHMIKNDQKPNIITLLNLLPICH---SQLQGKTVHSYAIRNFSKLETSLFTSAIC 687
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRK 599
MY R ++ N F ER+ WN +L+ + Q +A ++FR++ ++ K +
Sbjct: 688 MYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVT 747
Query: 600 LMGLFRKCQ 608
++ L C
Sbjct: 748 MLALISACS 756
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 250/512 (48%), Gaps = 5/512 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C G +H V +T +V + A L M+ K G + + VF M RD
Sbjct: 148 VIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRD 207
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN +I GY+ G EA ++M G +P+ + ++ G+ G +H
Sbjct: 208 LISWNAMISGYSLNGCLLEAAEALKQM-QQDGFRPNASSLVGIVSMVSGLGVRDAGDPLH 266
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G D + A I+MY G L + +F + +S N+MIS ++G +
Sbjct: 267 AFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWE 326
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K +F +MR + P+ +T+ S++ G VHG VIK G ++ VSV + L+
Sbjct: 327 KAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALV 386
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ + +FS + K + W ++IS Y + + + + + M+ EG PD +
Sbjct: 387 SMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDAL 446
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ SV+S C +L +G +H A+R+ L + N L+ MY+ C + ++FH +
Sbjct: 447 TVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTM 506
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
+ +ISW +II G N S L FF +M L +++ + VTL++++S+ + I + G+
Sbjct: 507 EVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGE 566
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+H+ A+R G D + NAL+ MY CG ++ F+S + + ++N L+TGY +
Sbjct: 567 SVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNN 626
Query: 579 QGALAEEFFRKMI--DSKGNWRKLMGLFRKCQ 608
F MI D K N L+ L C
Sbjct: 627 LFEEILPLFYHMIKNDQKPNIITLLNLLPICH 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 235/471 (49%), Gaps = 16/471 (3%)
Query: 93 VDEDAL--VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAW 150
VD DAL ++++ C G +H+ ++ L+ + NA L+M+ G L
Sbjct: 441 VDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F M R L SWN +I G+A+ G L + +M + ++ D+ T ++ + +
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQM-RLADMQFDLVTLIALISSLSAI 559
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
D+ G+ VH IR G DV V NALITMY CG + +FD + + IS+NA++
Sbjct: 560 EDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALM 619
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+GY +N + + L LF M + P+ +TL +++ + + G+ VH Y I+
Sbjct: 620 TGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLL---PICHSQLQGKTVHSYAIRNFSK 676
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ S+ I MY F N E +F + ++ + W ++S A + ++ +
Sbjct: 677 LETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQI 736
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ D +T+ +++SAC+ LG DL + +A++ G II+ N LIDM+S+C I
Sbjct: 737 QFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSI 796
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A ++F +K+ +SW+++I ++ AL F M+ + +KP+ +T VS+LSAC
Sbjct: 797 SFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSAC 856
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWN 555
+R G L G+ + R +A G P ++D+ R G + A++
Sbjct: 857 SRSGFLEQGRTL----FRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYD 903
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 189/412 (45%), Gaps = 5/412 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG L++ M+ ++ D L+ L+ G +HS+ +
Sbjct: 515 NTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIR 574
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +L V + NA ++M+ G + +F + + S+N L+ GY K F+E L L
Sbjct: 575 SGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPL 634
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M KP++ T +L C +GK VH + IR + + + + I MY
Sbjct: 635 FYHMIK-NDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYS 690
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ +L +F + +R+ I WNA++S + + F ++ + V D +T+ +
Sbjct: 691 RFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLA 750
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ISA +G L V ++ GF + V N LI M+ G+ K+F KD
Sbjct: 751 LISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKD 810
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VSW+TMI+ Y A++ + MM + G PD+IT SVLSAC+ G L+ G L
Sbjct: 811 SVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFR 870
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G+ + ++D+ + +D+A ++ +P + S +LG
Sbjct: 871 SMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLG 922
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+D SV ++ YL FG VF+ +V + C+ + + Y+
Sbjct: 74 EDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYR 133
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
+ A GS D T V+ ACA + L LG ++H +RTG + + L+DMY+K
Sbjct: 134 EVCAFGS--DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSG 191
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
+D + VF + +++ISW ++I G LN EA ++M + +PN+ +LV I+S
Sbjct: 192 QVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVS 251
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD-VSA 566
+ +G G +HA AL+ GV D L A + MY G + + + F+ + D + +
Sbjct: 252 MVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVS 311
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
N +++ + G A FR M
Sbjct: 312 CNSMISVCMQHGAWEKAFGVFRLM 335
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 249/461 (54%), Gaps = 27/461 (5%)
Query: 152 VFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F K D+ ++FSWN +I A++G EAL + M + +KP+ TFPC +++C +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSAL 165
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
DL G++ H + FG+E D+ V +AL+ MY KCG+L AR +FD + R+ +SW +MI
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 271 SGYFENGEYMKGLMLFIMM----------REVLVDPDFMTLSSVISASELVGDEKLGREV 320
+GY +N + + L+LF EV VDP + + SV+SA V ++ + V
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGV 283
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG++IK GF D+ V N L+ Y G +VF M +DV+SW ++I+ Y + +
Sbjct: 284 HGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMS 343
Query: 381 DKAVETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+++E + M +G + + +T+++VL ACA G+ LG +H ++ GL S + + +
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 403
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPN 498
+IDMY KC ++ A + F ++ +KNV SW++++ G ++ + EAL +F+ M +KPN
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463
Query: 499 SVTLVSILSACARIGALMCGKE-----IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+T VS+L+AC+ G L G H + GV G ++D+ R G +K A
Sbjct: 464 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG----CMVDLLGRAGYLKEA 519
Query: 554 WNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ + D W LL L E RK+ +
Sbjct: 520 FDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE 560
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 222/461 (48%), Gaps = 25/461 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + EL +G +AL+ SM++L++ + ++ C G H
Sbjct: 121 NSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALI 180
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A + M+ K G+L A +F ++ R++ SW +I GY + AL L
Sbjct: 181 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240
Query: 184 YQRMFWV--------GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
++ F V G V D VL C V + + VH +I+ G+E D+ V
Sbjct: 241 FKE-FLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVE 299
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLV 294
N L+ Y KCG+L +R VFDGM +RD ISWN++I+ Y +NG + + +F M+++ +
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ + +TLS+V+ A G ++LG+ +H VIKMG +V V +I MY G E K
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 419
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F RM K+V SW+ M++ Y +A+E + M G P+ IT SVL+AC+ G
Sbjct: 420 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 415 LDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVI 466
L+ G H+ + G+ Y ++D+ + + +A ++ + PD +
Sbjct: 480 LEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYLKEAFDLIKGMKLRPD--FV 533
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W +++ R++ I RK + L P + +LS
Sbjct: 534 VWGALLGACRMHKNVDLGEISARK-LFELDPKNCGYYVLLS 573
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 299/582 (51%), Gaps = 35/582 (6%)
Query: 54 NTSSIAT-KNPNSRLNELCLN----GSLEQALKYLDSMQELNICVDEDAL-----VNLVR 103
++SS+ T K+P++ +N GSLE +K L+ + L +E + + L++
Sbjct: 24 SSSSLPTEKSPSTSYQRSSINTQLDGSLE-PIKPLEFHEALCFIKEEKKIEPSYYLPLLQ 82
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
C K E +H+ + KT +H + + + ++++ K G +G+A +F + R++ +
Sbjct: 83 ECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVA 142
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W L+ GY + + A+ ++Q M G + P YT L C + +K GK++H V
Sbjct: 143 WTALMTGYVQNSQPNIAIDVFQDMLESGTL-PSNYTLGIALNACSAINSIKLGKQLHAFV 201
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
I++ + D + NAL ++Y K G L + VF + +++ ISW A+IS ENG+ GL
Sbjct: 202 IKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGL 261
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
F M + P+ TL++V+S + LGR VH IK+G+ ++ + N ++ +Y
Sbjct: 262 RFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLY 321
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-----------AVETYQMMEA 392
L G+ +E + +F +M S ++V+W MIS + ++ K A+ + +
Sbjct: 322 LKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNR 381
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD T++SVL+ C+ L L G +LH +++G +S +++ L++MYSKC I K
Sbjct: 382 TGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGK 441
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
A + F ++ + +ISWT++I GL + S +AL F M L ++PN +T V +L+AC
Sbjct: 442 ASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCH 501
Query: 512 IGAL---MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-- 566
G + + E+ RI D + L+ M+V+ R+ A++ N + + S
Sbjct: 502 SGMVDEALGYFEMMQKEYRIKPVMDHY--GCLIAMFVKLRRLDEAFDIINKMDFEPSEFI 559
Query: 567 WNILLTGYAERGQGAL----AEEFFRKMIDSKGNWRKLMGLF 604
W+IL+ G G+ L AE+ + + + L+ ++
Sbjct: 560 WSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMY 601
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 255/484 (52%), Gaps = 42/484 (8%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A +VF ++ L WN +I G +K+ ++A+ Y M++ G++ TF + +
Sbjct: 63 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYY-KGIQGSHLTFIFLFK 121
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+C V D+++G+ V VH ++ G+E+ + V NALI MYV G+L A+ VFDGM +RD +S
Sbjct: 122 SCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVS 181
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN++I GY++ + K L LF M+ + V D +T+ ISA+ + + ++G + Y+
Sbjct: 182 WNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID 241
Query: 326 KMGFSDDVSVCNPLIKMY-------------------------------LSFGNREEGEK 354
+ G D+ + N LI MY GN +K
Sbjct: 242 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKK 301
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F+ M S+DV+SWT+MI Y + +AV+ +Q M PDEIT+A+ LSACA LG+
Sbjct: 302 LFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGS 361
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
LD G +H + + S + + N+LIDMY KC ++KAL+VF+ + ++ +SWTSII G
Sbjct: 362 LDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISG 421
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL----RIG 529
L +N + AL F +M+ + P T V +L ACA +G + G E H ++ R+
Sbjct: 422 LAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFKSMENTYRLA 480
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFF 587
+ ++D+ R G + A+N DV W ILL+ G LAE
Sbjct: 481 PEMKHY--GCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVS 538
Query: 588 RKMI 591
+K++
Sbjct: 539 KKLL 542
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 200/433 (46%), Gaps = 50/433 (11%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+VR+ K G++ L++ NA + M+V FG+L A VF M +R
Sbjct: 133 QMVRVHSMKLGFESYLFV---------------SNALIHMYVCFGELAMAQKVFDGMLER 177
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC------------ 207
D+ SWN +I GY + F + L L++ M + V + TC
Sbjct: 178 DVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLV 237
Query: 208 ------GGVPDLKRGKEVHVHVIRFGY------------EADVDVVNALITMYVKCGDLV 249
G V DL G + R G E ++ NA+I Y K G+LV
Sbjct: 238 KYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLV 297
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ +F+ MP RD ISW +MI GY ++ + + LF M +V PD +T+++ +SA
Sbjct: 298 AAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACA 357
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G G VH Y+ K DV V N LI MY G E+ +VF+ M+++D VSWT+
Sbjct: 358 HLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTS 417
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS + + A+ + M EG P T VL ACA +G +D G++ H +M
Sbjct: 418 IISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFKSMENT 476
Query: 430 --LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALI 486
L + ++D+ + +D A ++P +V+ W ++ +L+ A I
Sbjct: 477 YRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEI 536
Query: 487 FFRKMMLNLKPNS 499
+K+++ L P++
Sbjct: 537 VSKKLLV-LDPSN 548
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
++ L MQ +N+ D ++ + + ++ G YL + + + + LGN
Sbjct: 195 FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNT 254
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------FFD---------- 178
+ M+ + G + A VF +M ++++ SWN +I GYAK G F+
Sbjct: 255 LIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 314
Query: 179 --------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
EA+ L+Q M V VKPD T L C + L G+ VH ++
Sbjct: 315 TSMIIGYSLAKQHAEAVKLFQEMM-VSMVKPDEITVATALSACAHLGSLDAGEAVHDYIR 373
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ ++DV V N+LI MY KCG + +A VF+ M RD +SW ++ISG NG L
Sbjct: 374 KHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALN 433
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVG 312
+F M + + P T V+ A VG
Sbjct: 434 VFDQMLKEGICPTHGTFVGVLLACAHVG 461
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K M + DE + + C D G +H + K V +GN+ +
Sbjct: 329 EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLI 388
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G + A VF M RD SW +I G A GF + AL+++ +M G+ P
Sbjct: 389 DMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQML-KEGICPTH 447
Query: 198 YTFPCVLRTCGGVPDLKRGKE 218
TF VL C V + +G E
Sbjct: 448 GTFVGVLLACAHVGLVDKGVE 468
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 233/460 (50%), Gaps = 2/460 (0%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N L + VK L A +F ++ RD SW +I GY + EAL L+ +M
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D + L+TCG + G +H ++ G V V +AL+ MY+K G++ R+
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSC 171
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP R+ ++W A+I+G G GL F M V+ D + + AS G
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H +K GF ++ V N L MY G + G F +M + DVVSWTT+++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y D ++ ++ M A +P+E T ++V+S CA L G +LH + G ++
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ +AN+++ +YSKC + +VF + +++I+W++II EA + +M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
KPN L S+LS C + L GK++HAH L +G+ + +AL+ MY +CG +
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIA 471
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F +S + D+ +W +++GYAE G A E F +
Sbjct: 472 EASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI 511
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 247/499 (49%), Gaps = 24/499 (4%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C Y G LH K SV +G+A L M++K G++G + VF +M R+
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+W +I G +AG+ + L+ + M V+ D Y + L+ L G+ +H
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGM-GRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
++ G++ + V N+L TMY KCG L F M D +SW +++ Y + G+
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
GL F MR V P+ T S+VIS K G ++H +V+ +GF + +SV N ++
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
+Y G KVF M+ +D+++W+T+I+ Y ++A E M +EG P+E
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFA 421
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ASVLS C + L+ G +LH + GL ++ + LI MY+KC I +A ++F
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-- 518
++ISWT++I G + S EA+ F + + L+P+SVT + +L+AC+ G + G
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFY 541
Query: 519 ------KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNIL 570
K+ H I + + + ++D+ R GR+ A S + D W+ L
Sbjct: 542 YFNSMSKDYH-----ITPSKEHY--GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594
Query: 571 LT-----GYAERGQGALAE 584
L G + GQ A AE
Sbjct: 595 LRACRIHGDVDCGQRAAAE 613
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
F + D+ N + + VK L AR +FD +P+RD +SW +ISGY + + + L
Sbjct: 42 HFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALR 101
Query: 285 LFIMMR---EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
LF MR E+ +DP ++L + L + G +HG+ +K G + V V + L+
Sbjct: 102 LFSKMRLQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLD 159
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G KVF M +++ V+WT +I+ + + + + M D
Sbjct: 160 MYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYA 219
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
A L A A G L+ G +H ++ G +AN+L MY+KC +D L F ++
Sbjct: 220 YAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR 279
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE 520
+V+SWT+I+ + L F++M N+ PN T +++S CA L G++
Sbjct: 280 TLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQ 339
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ 579
+HAH L +G + N+++ +Y +CG + F S + RD+ W+ ++ Y++ G
Sbjct: 340 LHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGY 399
Query: 580 GALAEEFFRKM 590
G A E+ +M
Sbjct: 400 GEEAFEYLSRM 410
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 166/345 (48%), Gaps = 1/345 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E L Y M + D A ++ + G +H+ K + +
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +M+ K G L + + F KM D+ SW ++ Y + G D L ++RM V
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR-ASNV 314
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ YTF V+ C LK G+++H HV+ G+ + V N+++T+Y KCG+L
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M RD I+W+ +I+ Y + G + MR P+ L+SV+S +
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+++H +V+ +G VC+ LI MY G+ E K+F D++SWT MIS
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y +A+E ++ ++ G PD +T VL+AC+ G +DLG
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 233/460 (50%), Gaps = 2/460 (0%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N L + VK L A +F ++ RD SW +I GY + EAL L+ +M
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D + L+TCG + G +H ++ G V V +AL+ MY+K G++ R+
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSC 171
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP R+ ++W A+I+G G GL F M V+ D + + AS G
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H +K GF ++ V N L MY G + G F +M + DVVSWTT+++
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y D ++ ++ M A +P+E T ++V+S CA L G +LH + G ++
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ +AN+++ +YSKC + +VF + +++I+W++II EA + +M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
KPN L S+LS C + L GK++HAH L +G+ + +AL+ MY +CG +
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIA 471
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F +S + D+ +W +++GYAE G A E F +
Sbjct: 472 EASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENI 511
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 248/499 (49%), Gaps = 24/499 (4%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C Y G LH KT SV +G+A L M++K G++G + VF +M R+
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNA 182
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+W +I G +AG+ + L+ + M V+ D Y + L+ L G+ +H
Sbjct: 183 VTWTAVITGLVRAGYSEAGLAYFSGM-GRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
++ G++ + V N+L TMY KCG L F M D +SW +++ Y + G+
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
GL F MR V P+ T S+VIS K G ++H +V+ +GF + +SV N ++
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
+Y G KVF M+ +D+++W+T+I+ Y ++A E M +EG P+E
Sbjct: 362 LYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFA 421
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ASVLS C + L+ G +LH + GL ++ + LI MY+KC I +A ++F
Sbjct: 422 LASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSW 481
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-- 518
++ISWT++I G + S EA+ F + + L+P+SVT + +L+AC+ G + G
Sbjct: 482 KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFY 541
Query: 519 ------KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNIL 570
K+ H I + + + ++D+ R GR+ A S + D W+ L
Sbjct: 542 YFNSMSKDYH-----ITPSKEHY--GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594
Query: 571 LT-----GYAERGQGALAE 584
L G + GQ A AE
Sbjct: 595 LRACRIHGDVDCGQRAAAE 613
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 7/371 (1%)
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
F + D+ N + + VK L AR +FD +P+RD +SW +ISGY + + + L
Sbjct: 42 HFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALR 101
Query: 285 LFIMMR---EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
LF MR E+ +DP ++L + L + G +HG+ +K G + V V + L+
Sbjct: 102 LFSKMRLQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLD 159
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G KVF M +++ V+WT +I+ + + + + M D
Sbjct: 160 MYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYA 219
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
A L A A G L+ G +H ++ G +AN+L MY+KC +D L F ++
Sbjct: 220 YAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR 279
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE 520
+V+SWT+I+ + L F++M N+ PN T +++S CA L G++
Sbjct: 280 TLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQ 339
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQ 579
+HAH L +G + N+++ +Y +CG + F S + RD+ W+ ++ Y++ G
Sbjct: 340 LHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGY 399
Query: 580 GALAEEFFRKM 590
G A E+ +M
Sbjct: 400 GEEAFEYLSRM 410
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 166/345 (48%), Gaps = 1/345 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E L Y M + D A ++ + G +H+ K + +
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +M+ K G L + + F KM D+ SW ++ Y + G D L ++RM V
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR-ASNV 314
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ YTF V+ C LK G+++H HV+ G+ + V N+++T+Y KCG+L
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF M RD I+W+ +I+ Y + G + MR P+ L+SV+S +
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+++H +V+ +G VC+ LI MY G+ E K+F D++SWT MIS
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y +A+E ++ ++ G PD +T VL+AC+ G +DLG
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
>gi|224084768|ref|XP_002307403.1| predicted protein [Populus trichocarpa]
gi|222856852|gb|EEE94399.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 235/437 (53%), Gaps = 7/437 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M +R++ SW +I GY K G DEALS + + GV P+ TF CVL C D +
Sbjct: 1 MPERNVVSWTAMINGYFKFGLDDEALSYFSQAI-KDGVVPNSKTFVCVLNLCSRRLDFEL 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G++VH V++ G ++ V +A++ YV+CGDL A VFD M +RD +SW MI+ +
Sbjct: 60 GRQVHARVVK-GNWRNLIVDSAVVYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQ 118
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G + +F M P+ T S ++ A K G+++HG ++K + DDV V
Sbjct: 119 QGRCGEAFGMFTQMLNGGFLPNGFTASGILKACGEEKALKFGKQIHGAIVKKMYKDDVFV 178
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G + KVF+ M ++ V+WT++I+ Y L ++A+ +++M
Sbjct: 179 GTSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGLGEEAICLFRLMMRRRV 238
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+ + +TI S+L AC +G L G ++H ++ S + +TL+ Y KC A +
Sbjct: 239 VSNNLTIVSMLRACGLIGALLAGREVHAQIIKNCSQSNEYLGSTLVWFYCKCGESRTASK 298
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGA 514
V Q+P ++V+SWT+II G EAL F ++MM ++PNS T S L ACA +
Sbjct: 299 VLQQMPFRDVVSWTAIISGHACLGHESEALEFLKEMMEEGVEPNSFTYSSALKACANLET 358
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
++ GK IH+ A + + + F+ +AL+ MY RCG + A F+S ER++ W ++ G
Sbjct: 359 VLQGKLIHSSANKTPASSNVFVGSALIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMG 418
Query: 574 YAERGQGALAEEFFRKM 590
Y G L +E + M
Sbjct: 419 YVRNG---LCQEALKLM 432
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 233/437 (53%), Gaps = 3/437 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL Y + + + V ++ LC + ++ G +H+ V K + ++ + +A
Sbjct: 23 DEALSYFSQAIKDGVVPNSKTFVCVLNLCSRRLDFELGRQVHARVVKG-NWRNLIVDSAV 81
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ +V+ GDL A+ VF +M +RD+ SW +I ++ G EA ++ +M GG P+
Sbjct: 82 VYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQQGRCGEAFGMFTQML-NGGFLPN 140
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T +L+ CG LK GK++H +++ Y+ DV V +L+ MY KCG++ + VF+
Sbjct: 141 GFTASGILKACGEEKALKFGKQIHGAIVKKMYKDDVFVGTSLVDMYAKCGEVSDSSKVFN 200
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
GM +R+ ++W ++I+GY G + + LF +M V + +T+ S++ A L+G
Sbjct: 201 GMRRRNTVTWTSIIAGYARKGLGEEAICLFRLMMRRRVVSNNLTIVSMLRACGLIGALLA 260
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GREVH +IK + + + L+ Y G KV +M +DVVSWT +IS +
Sbjct: 261 GREVHAQIIKNCSQSNEYLGSTLVWFYCKCGESRTASKVLQQMPFRDVVSWTAIISGHAC 320
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+E + M EG P+ T +S L ACA L + G +H A +T S + +
Sbjct: 321 LGHESEALEFLKEMMEEGVEPNSFTYSSALKACANLETVLQGKLIHSSANKTPASSNVFV 380
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNL 495
+ LI MY++C + +A++VF +P++N+++W ++I+G N EAL + +R +
Sbjct: 381 GSALIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRMQAEGI 440
Query: 496 KPNSVTLVSILSACARI 512
+ + +L AC I
Sbjct: 441 QVDDYISAKVLGACGEI 457
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 180/337 (53%), Gaps = 3/337 (0%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MP+R+ +SW AMI+GYF+ G + L F + V P+ T V++ D +LG
Sbjct: 1 MPERNVVSWTAMINGYFKFGLDDEALSYFSQAIKDGVVPNSKTFVCVLNLCSRRLDFELG 60
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R+VH V+K G ++ V + ++ Y+ G+ + VF RM +DVVSWTTMI+
Sbjct: 61 RQVHARVVK-GNWRNLIVDSAVVYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQQ 119
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A + M G +P+ T + +L AC L G ++H ++ + +
Sbjct: 120 GRCGEAFGMFTQMLNGGFLPNGFTASGILKACGEEKALKFGKQIHGAIVKKMYKDDVFVG 179
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
+L+DMY+KC + + +VF+ + +N ++WTSII G EA+ FR MM +
Sbjct: 180 TSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGLGEEAICLFRLMMRRRVV 239
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N++T+VS+L AC IGAL+ G+E+HA ++ + +L + L+ Y +CG + A
Sbjct: 240 SNNLTIVSMLRACGLIGALLAGREVHAQIIKNCSQSNEYLGSTLVWFYCKCGESRTASKV 299
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RDV +W +++G+A G + A EF ++M++
Sbjct: 300 LQQMPFRDVVSWTAIISGHACLGHESEALEFLKEMME 336
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
FY K +SK Q + + + ++I + + CL G +AL++L M E
Sbjct: 286 FYCKCGESRTASKVLQQMPFRDVVSWTAIISGHA-------CL-GHESEALEFLKEMMEE 337
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
+ + + ++ C +G +HS +KT + +V +G+A + M+ + G + A
Sbjct: 338 GVEPNSFTYSSALKACANLETVLQGKLIHSSANKTPASSNVFVGSALIHMYARCGYVSEA 397
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
VF M +R+L +W +I GY + G EAL L RM G++ D Y VL CG
Sbjct: 398 IQVFDSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRM-QAEGIQVDDYISAKVLGACGE 456
Query: 210 V 210
+
Sbjct: 457 I 457
>gi|414864687|tpg|DAA43244.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
Length = 658
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 233/453 (51%), Gaps = 4/453 (0%)
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTF 200
+ G + A F + F NV+I G+A AG +AL+ Y+ M +PD +TF
Sbjct: 67 IAAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAML-AASARPDRFTF 125
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P V++ C L G+ H VI+ G AD+ N+L+ +Y K G + A VFDGMP
Sbjct: 126 PVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFDGMPA 185
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGRE 319
RD +SWN M+ GY NG L F M + L V D + + + ++A L GRE
Sbjct: 186 RDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAACCLESALAQGRE 245
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+HGY I+ G DV V L+ MY GN E VF+ M + VV+W +I Y +
Sbjct: 246 IHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYALNER 305
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
P A + + M AEG + +T ++L+AC + G +H +R + ++++
Sbjct: 306 PVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETA 365
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPN 498
L++MY ++ + ++F Q+ +K V++W ++I EA+ F +++ L P+
Sbjct: 366 LLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPD 425
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T+ +++ A +G+L +++H++ +++G + NA++ MY RCG + + F+
Sbjct: 426 YFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFD 485
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DV +WN ++ GYA GQG A E F +M
Sbjct: 486 KMPGKDVISWNTIIIGYAIHGQGKTALEMFDEM 518
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 211/414 (50%), Gaps = 1/414 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+V+ C EG H+ V K + N+ ++++ K G +G A VF M RD
Sbjct: 128 VVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFDGMPARD 187
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN ++ GY G AL+ ++ M V+ D L C L +G+E+H
Sbjct: 188 IVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAACCLESALAQGREIH 247
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ IR G E DV V +L+ MY KCG+++ A VF M R ++WN +I GY N +
Sbjct: 248 GYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYALNERPV 307
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
F+ MR + +T ++++A GR VH YV++ F V + L+
Sbjct: 308 DAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALL 367
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+MY + G E EK+F +M K VV+W MI+ Y + +A+ + + + PD
Sbjct: 368 EMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPDYF 427
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ +V+ A LG+L ++H ++ G +I N ++ MY++C I + E+F ++
Sbjct: 428 TMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKM 487
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
P K+VISW +II+G ++ + AL F +M N ++PN T VS+L+AC+ G
Sbjct: 488 PGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTACSVSG 541
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 2/351 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ ++ NG AL M + L + D ++ + C + +G +H
Sbjct: 192 NTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAACCLESALAQGREIHGYAI 251
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ V++G + + M+ K G++ +A VF M R + +WN LIGGYA +A
Sbjct: 252 RHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYALNERPVDAFD 311
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ +M G + + T +L CG G+ VH +V+R + V + AL+ MY
Sbjct: 312 CFMQM-RAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALLEMY 370
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
G + + +F M ++ ++WN MI+ Y Y + + LF+ + + PD+ T++
Sbjct: 371 GNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPDYFTMT 430
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+V+ A L+G + R++H Y+IK+G+ D + N ++ MY G+ ++F +M K
Sbjct: 431 TVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGK 490
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
DV+SW T+I Y A+E + M+ G P+E T SVL+AC+ G
Sbjct: 491 DVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTACSVSG 541
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 3/342 (0%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
+L+ ++ G + A F G+ N MI G+ + G + L + M
Sbjct: 60 KSLVLSHIAAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAMLAASAR 119
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T V+ G GR H VIK+G D+ N L+ +Y G + E+V
Sbjct: 120 PDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERV 179
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ-MMEAEGSMPDEITIASVLSACACLGN 414
F M ++D+VSW TM+ Y + + A+ ++ M +A D + + + L+AC
Sbjct: 180 FDGMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAACCLESA 239
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G ++H A+R GL + + +L+DMY KC + A VF + + V++W +I G
Sbjct: 240 LAQGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGG 299
Query: 475 LRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
LN R +A F +M + +VT +++L+AC + + + G+ +HA+ +R
Sbjct: 300 YALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPH 359
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
L ALL+MY G+++ + F E+ V WN ++ Y
Sbjct: 360 VVLETALLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAY 401
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 3/255 (1%)
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ +++ G +E F+ + S MI + + LP A+ Y+ M A + PD
Sbjct: 62 LVLSHIAAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAMLAASARPD 121
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T V+ C G L G H ++ GL + + AN+L+ +Y+K + A VF
Sbjct: 122 RFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFD 181
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALM 516
+P ++++SW +++ G N AL FR M L ++ + V +++ L+AC AL
Sbjct: 182 GMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAALAACCLESALA 241
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYA 575
G+EIH +A+R G+ D + +L+DMY +CG + A N F + R V WN L+ GYA
Sbjct: 242 QGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYA 301
Query: 576 ERGQGALAEEFFRKM 590
+ A + F +M
Sbjct: 302 LNERPVDAFDCFMQM 316
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N + LN A M+ V+ +NL+ C G +H+ V +
Sbjct: 294 NCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVR 353
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V L A L M+ G + + +FG+M ++ + +WN +I Y + EA++L
Sbjct: 354 RHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIAL 413
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ + + PD +T V+ + L++ +++H ++I+ GY ++NA++ MY
Sbjct: 414 FLELLN-QPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYA 472
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+CGD+V +R +FD MP +D ISWN +I GY +G+ L +F M+ ++P+ T S
Sbjct: 473 RCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVS 532
Query: 304 VISASELVGDEKLG 317
V++A + G E G
Sbjct: 533 VLTACSVSGLETEG 546
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+D+A + F + +I G +AL +R M+ + +P+ T ++
Sbjct: 72 MDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAMLAASARPDRFTFPVVVKC 131
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C R GAL G+ HA +++G+ D + N+L+ +Y + G + A F+ RD+ +W
Sbjct: 132 CTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFDGMPARDIVSW 191
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY G GALA FR M D+
Sbjct: 192 NTMVDGYVSNGMGALALACFRDMNDA 217
>gi|218193846|gb|EEC76273.1| hypothetical protein OsI_13747 [Oryza sativa Indica Group]
Length = 602
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 254/501 (50%), Gaps = 9/501 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFV---KFGDLGHAWYVF 153
L+ ++R C GL +H V+ + L + M+V +F D +
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTCGGVP 211
+ WN LI G AG + AL Y +M W PD +TFP V+++C +
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALG 160
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ VH G + D+ V +ALI MY G L AR VFDGM +RD + WN M+
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + G + LF MR +P+F TL+ +S S D G ++H +K G
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V+V N L+ MY ++G K+F M D+V+W MIS + D+A+ + M+
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD +T+ S+L A L + G +LH +R + + + + L+D+Y KC+ +
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A V+ +V+ +++I G LN S EA+ FR ++ ++PN+V + S+L ACA
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ A+ G+E+H++AL+ ++ +AL+DMY +CGR+ + F+ + +D WN
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520
Query: 570 LLTGYAERGQGALAEEFFRKM 590
+++ +A+ G+ A FR+M
Sbjct: 521 MISSFAQNGEPEEALNLFREM 541
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 220/397 (55%), Gaps = 2/397 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A + M+ G L A VF M +RD WNV++ GY KAG A+ L+ M
Sbjct: 183 VGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMR-AS 241
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+ T C L DL G ++H +++G E++V V N L++MY KC L
Sbjct: 242 GCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG 301
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F MP+ D ++WN MISG +NG + L+LF M++ + PD +TL S++ A +
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+E+HGY+++ DV + + L+ +Y + V+ ++ DVV +TMI
Sbjct: 362 NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMI 421
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + + +AV+ ++ + +G P+ + IASVL ACA + + LG +LH A++
Sbjct: 422 SGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYE 481
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+DMY+KC +D + +F +I K+ ++W S+I N EAL FR+M
Sbjct: 482 GRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREM 541
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
M +K ++VT+ S+LSACA + A+ GKEIH ++
Sbjct: 542 CMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK 578
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 204/398 (51%), Gaps = 8/398 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VLR C L G +VH + G A D + L+ MYV A VF +P+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 262 DR---ISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDEKL 316
+ WN +I G G+Y L+ ++ M PD T V+ + +G L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR VH +G D+ V + LIKMY + G + +VF M +D V W M+ Y
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ AVE + M A G P+ T+A LS A +L G++LH LA++ GL S + +
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
ANTL+ MY+KCKC+D ++F +P ++++W +I G N +AL+ F M + +
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P+SVTLVS+L A + GKE+H + +R V D FL +AL+D+Y +C ++ A +
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 556 QFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
++S++ DV + +++GY G A + FR +++
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 169/314 (53%), Gaps = 1/314 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ LH++ K V + N +SM+ K L W +FG M DL +WN +I G +
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
GF D+AL L+ M G++PD T +L + +GKE+H +++R DV
Sbjct: 326 NGFVDQALLLFCDM-QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVF 384
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+V+AL+ +Y KC + A+ V+D D + + MISGY NG + + +F + E
Sbjct: 385 LVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG 444
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P+ + ++SV+ A + KLG+E+H Y +K + V + L+ MY G +
Sbjct: 445 IRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSH 504
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+FS++ +KD V+W +MIS + + P++A+ ++ M EG +TI+SVLSACA L
Sbjct: 505 YIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLP 564
Query: 414 NLDLGIKLHQLAMR 427
+ G ++H + ++
Sbjct: 565 AIYYGKEIHGVVIK 578
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 1/271 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ NG ++QAL MQ+ I D LV+L+ G+++G LH + +
Sbjct: 317 NGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVR 376
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H+ V L +A + ++ K + A V+ D+ + +I GY G EA+ +
Sbjct: 377 NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKM 436
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R G++P+ VL C + +K G+E+H + ++ YE V +AL+ MY
Sbjct: 437 F-RYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYA 495
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L + +F + +D ++WN+MIS + +NGE + L LF M V +T+SS
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISS 555
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVS 334
V+SA + G+E+HG VIK D+S
Sbjct: 556 VLSACASLPAIYYGKEIHGVVIKGPIRADLS 586
>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 878
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 260/501 (51%), Gaps = 10/501 (1%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
+ + + ++ CE GL++H V K ++ L N LS+++K + +A +F
Sbjct: 23 QQSCIRILSFCE-SSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 81
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+M R +F+W V+I + K+ F ALSL++ M G+ P+ +TF V+R+C G+ DL
Sbjct: 82 EMPQRTVFAWTVMISAFTKSQEFASALSLFEEMM-ASGIHPNEFTFSSVIRSCAGLGDLS 140
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G VH V++ G+E + V ++L +Y KCG L AR +F + D ISW MIS
Sbjct: 141 YGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLV 200
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
++ + L + M + V P+ T ++ AS +G E G+ +H +I G +V
Sbjct: 201 GARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGLE-FGKTIHSSIIVRGIPLNVV 259
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ L+ Y F E+ +V + +DV WT+++S + ++ +AV T+ M + G
Sbjct: 260 LKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 319
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID-KA 453
P+ T +++LS C+ + +LDLG ++H ++ G + N L+ MY KC + +A
Sbjct: 320 LHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEA 379
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACA 510
VF + NV+SWT++ILGL + FE F M + ++PN VTL +L AC+
Sbjct: 380 SRVFGAMISPNVVSWTTLILGLV--DHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACS 437
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
++ L EIH + LR V + + N+L+D Y G++ AWN S + RD +
Sbjct: 438 KLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTS 497
Query: 570 LLTGYAERGQGALAEEFFRKM 590
L+T + E G+ +A M
Sbjct: 498 LVTRFNELGKHEMALSVINHM 518
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 210/401 (52%), Gaps = 12/401 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H VI+FG ++D+ N L+++Y+K + AR +FD MP+R +W MIS + +
Sbjct: 41 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTK 100
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ E+ L LF M + P+ T SSVI + +GD G VHG V+K GF + V
Sbjct: 101 SQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVV 160
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+ L +Y G +E ++FS +++ D +SWT MIS G+ +A+ Y M G
Sbjct: 161 GSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGV 220
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+E T +L A + LG L+ G +H + G+ +++ +L+ YS ++ A+
Sbjct: 221 PPNEFTFVKLLGASSFLG-LEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVR 279
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
V + +++V WTS++ G N R+ EA+ F +M L L PN+ T +ILS C+ + +
Sbjct: 280 VLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRS 339
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK-PAWNQFNSN-ERDVSAWNILLT 572
L GK+IH+ +++G + NAL+ MY++C + A F + +V +W L+
Sbjct: 340 LDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLIL 399
Query: 573 GYAERG-----QGALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
G + G G L E R++ + N+ L G+ R C
Sbjct: 400 GLVDHGFEQDCFGLLMEMVKREV---EPNFVTLSGVLRACS 437
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 230/438 (52%), Gaps = 8/438 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL++ M + + +E V L+ + G + G +HS + L+V L + +
Sbjct: 207 EALRFYSEMIKAGVPPNEFTFVKLLGASSF-LGLEFGKTIHSSIIVRGIPLNVVLKTSLV 265
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ F + A V ++D+F W ++ G+ + EA+ + M +G + P+
Sbjct: 266 YFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LHPNN 324
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFD 256
+T+ +L C V L GK++H I+ G+E DV NAL++MY+KC V A VF
Sbjct: 325 FTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFG 384
Query: 257 GMPKRDRISWNAMISGYFENG--EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
M + +SW +I G ++G + GL++ ++ REV +P+F+TLS V+ A +
Sbjct: 385 AMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREV--EPNFVTLSGVLRACSKLKYL 442
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+L E+HGY+++ ++ V N L+ Y S G + V M+ +D +++T++++ +
Sbjct: 443 RLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRF 502
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A+ M +G D++++ +SA A LG + G LH ++++G +
Sbjct: 503 NELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAV 562
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ N+L+DMYSKC ++ A +VF +I +V+SW ++ GL R AL F +M M
Sbjct: 563 SVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMK 622
Query: 494 NLKPNSVTLVSILSACAR 511
+P+SVT + +LSAC++
Sbjct: 623 GTEPDSVTFLILLSACSK 640
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 244/516 (47%), Gaps = 5/516 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL + M I +E +++R C G +H V KT + +G++
Sbjct: 106 SALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLT 165
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G L A +F + + D SW ++I A + EAL Y M GV P+
Sbjct: 166 DLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIK-AGVPPNE 224
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TF +L L+ GK +H +I G +V + +L+ Y + A V +
Sbjct: 225 FTFVKLL-GASSFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNS 283
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++D W +++SG+ N + + F+ MR + + P+ T S+++S V LG
Sbjct: 284 TGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLG 343
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE-EGEKVFSRMESKDVVSWTTMISCYEG 376
+++H IK+GF D V N L+ MY+ E E +VF M S +VVSWTT+I
Sbjct: 344 KQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVD 403
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
M P+ +T++ VL AC+ L L L +++H +R + +I+
Sbjct: 404 HGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIV 463
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
N+L+D Y+ +D A V + ++ I++TS++ + AL M + +
Sbjct: 464 GNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGI 523
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ + ++L +SA A +GA GK +H ++++ G + + N+L+DMY +CG ++ A
Sbjct: 524 RMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKK 583
Query: 556 QFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
F DV +WN L++G A G+ + A F +M
Sbjct: 584 VFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEM 619
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 215/485 (44%), Gaps = 37/485 (7%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A+ M+ L + + ++ LC R D G +HS K S +GNA
Sbjct: 306 KEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNAL 365
Query: 137 LSMFVK-FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+SM++K A VFG M ++ SW LI G GF + L M V+P
Sbjct: 366 VSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVK-REVEP 424
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ T VLR C + L+ E+H +++R + ++ V N+L+ Y G + A V
Sbjct: 425 NFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVT 484
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M RD I++ ++++ + E G++ L + M + D ++L ISAS +G +
Sbjct: 485 RSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHE 544
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +H Y +K GFS VSV N L+ MY G+ E+ +KVF + DVVSW ++S
Sbjct: 545 TGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLA 604
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ ++ M +G+ PD +T +LSAC+ ++G++ Q
Sbjct: 605 SIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQ------------ 652
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+++ H + + + + ++ L R EA M +L
Sbjct: 653 -----------------SMKTIHNM-EPQIEHYVHLVGILGRAGRLEEATGVVETM--HL 692
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
KPN++ ++L AC G L G+++ L + + F L D+Y G KP
Sbjct: 693 KPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYI-LLADLYDESG--KPELA 749
Query: 556 QFNSN 560
Q N
Sbjct: 750 QKTRN 754
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT 124
+R NEL G E AL ++ M I +D+ +L + ++ G +LH K+
Sbjct: 500 TRFNEL---GKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKS 556
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
+V + N+ + M+ K G L A VF ++ D+ SWN L+ G A G ALS +
Sbjct: 557 GFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAF 616
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCG-------GVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+ M + G +PD TF +L C G+ + K +H E ++
Sbjct: 617 EEM-RMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIH------NMEPQIEHYVH 669
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
L+ + + G L A V + M + NAMI
Sbjct: 670 LVGILGRAGRLEEATGVVETM----HLKPNAMI 698
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 253/501 (50%), Gaps = 3/501 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D L++ +R C + +G +H + ++ L + + + D A V
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 153 FGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F C D+ WN L+ Y F EAL L+ ++ V+PD YT+P VL+ CGG+
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ +H H+++ G DV V ++L+ MY KC V A +FD P+RD WNA+IS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
YF++G+ L F M+E+ +P+ +T + V+S+ + + + G+EVH +I+
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D V + L+ MY G E ++VF ++ K+ ++W MI+ Y +E M
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG+ P +T+ S++ A + L G +H +R + I I +LID Y KC +
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A +F I V+SW +I G + +AL + M ++KP+++T S LSAC+
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++ AL G+E+H + + + + ALLDMY +CG + A F+ +RD+ +W
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ Y GQ + A F +M
Sbjct: 481 MIFAYGSHGQASEALRLFDEM 501
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 252/468 (53%), Gaps = 11/468 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H+ + KT V +G++ ++M+ K A +F + RD+ WN +I Y K
Sbjct: 125 GRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFK 184
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + AL + +M +G +P+ TF V+ +C + +L+RGKEVH +I D
Sbjct: 185 DGKAEMALKTFDKMKELG-FEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V++AL+ MY KCG L A+ VF+ +P+++ I+WNAMI+GY G+ + L + M +
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P MTL+S+I AS + G+ +HGY+++ D+ + LI Y G E
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F + +VVSW MIS + +A+ Y M+ PD +T +S LSAC+ L
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD G +LH + L + I+ L+DMY+KC +D+A ++FHQ+P ++++SWTS+I
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-----KEIHAHALR 527
+ ++ EAL F +M LN++ +SVT +++LSAC+ G + G + + + ++
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK 543
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYA 575
G+ + L+D+ R GR+ A+ ++ S +L T ++
Sbjct: 544 PGIEH----YSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFS 587
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 3/437 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E ALK D M+EL + +V C + G +H + + L +
Sbjct: 185 DGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G L A VF K+ ++ +WN +I GY+ G + L RM G
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN-DEG 303
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
KP + T ++ L+ GK +H +++R + D+ + +LI Y KCG + A
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + K + +SWN MISG+ G +++ L ++ M+E V PD +T SS +SA +
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GRE+H +I + V L+ MY G+ +E K+F ++ +D+VSWT+MI
Sbjct: 424 ALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLI 431
Y +A+ + M+ D +T +VLSAC+ G +D G + +++ ++ +
Sbjct: 484 AYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIK 543
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRK 490
I + LID+ + + +A E+ + + ++ I S + L + +F I K
Sbjct: 544 PGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGK 603
Query: 491 MMLNLKPNSVTLVSILS 507
M++ + P+ + +LS
Sbjct: 604 MLIEVDPDDPSTYILLS 620
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D++TL S + K G+ +H + GF ++ + LI Y S + E VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 357 SRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGN 414
+ DV W ++S Y + +A++ + + + PD T VL AC LG
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G ++H ++TGLI + + ++L++MY+KC A+++F + P ++V W ++I
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 475 LRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ ++ AL F KM L +PNSVT ++S+C R+ L GKE+H + + D
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
F+ +AL+DMY +CG ++ A F R + WN ++TGY+ +G E +M D
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 593 SKGNWRKLMGL 603
+G LM L
Sbjct: 302 -EGTKPTLMTL 311
>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
Length = 830
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 256/526 (48%), Gaps = 16/526 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G LEQAL M + + +E V+++ C+ D G +H ++ ++ +G
Sbjct: 190 GCLEQALTLFIEMLQEGVAPNEITYVSVLNACD----LDAGRKVHRLIEQSGLDSDAFVG 245
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ + G L A VF + DR+L WN +I GYA L +++M + G
Sbjct: 246 NALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKML-LDGW 304
Query: 194 KPDVYTFPCVLRTCGGVPDLKRG--KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
K D +T VL C L+ + +H + G ++D V AL+ + + GD A
Sbjct: 305 KGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSA 364
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++VFD + +D +WN M S Y ++G + L M+ V PD +T S++SA
Sbjct: 365 KMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTAT 424
Query: 312 GDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G + G++ H +++ G+ D + L++MY + G ++ + VF +MES+D++SWT
Sbjct: 425 GSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWT 484
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM+ Y + L D+A T++ ++ EG PD + + + L AC NL H+ +
Sbjct: 485 TMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACT---NLSSARDFHERIRQL 541
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G ++AN L+++YS C ++ A E F I + +VISW +I A
Sbjct: 542 GWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLL 601
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R M L P+SVTL +++++ A + GK IH L G+ D + AL++ Y +C
Sbjct: 602 RAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKC 661
Query: 548 GRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G A + F +V WN L YA+ G + A +M+
Sbjct: 662 GDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMV 707
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 232/472 (49%), Gaps = 13/472 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G LH+ + ++ L N + M++ + +A VF KM RD W ++ YA
Sbjct: 26 KGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLWAPMMAAYA 85
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G EA L+ RM GV PD T V+ C L G+ VH + +E V
Sbjct: 86 RVGHLQEATGLFHRML-DEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQGSDFEWSV 144
Query: 233 DVVNALITMYVKCGDLVRARLVFDG-MPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
DV AL+ MY KCG + AR VFD + +++ +SW M+S Y E G + L LFI M +
Sbjct: 145 DVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQ 204
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V P+ +T SV++A +L GR+VH + + G D V N LIKMY G+ E+
Sbjct: 205 EGVAPNEITYVSVLNACDL----DAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLED 260
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
VF + ++++ W +MI+ Y +E ++ M +G D+ T+ +VL ACA
Sbjct: 261 ASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAK 320
Query: 412 LGNLDLGI--KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L +H LA+ +GL S ++ L+ + S+ A VF + K++ +W
Sbjct: 321 SSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWN 380
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA---LMCGKEIHAHA 525
+ + R +A+ +M L+ ++P+ VT VSILSAC G+ L GK+ H
Sbjct: 381 CMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEI 440
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
L G D L AL+ MY CGR+ A F E RD+ +W +L Y +
Sbjct: 441 LEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQ 492
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 214/409 (52%), Gaps = 12/409 (2%)
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M V + V LR C +P +GKE+H ++ G + ++ + N ++ MY+ C
Sbjct: 1 MLAVLTISTTVTDLAASLRACHTLP---KGKELHAQIVSDGLDKNLHLANGIVHMYLVCK 57
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ AR VFD M RD W M++ Y G + LF M + V PD +TL +VI+
Sbjct: 58 SVDNARKVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVIN 117
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF-SRMESKDVV 365
A G GR VH + F V V L++MY G+ +E +VF +R+ K++V
Sbjct: 118 ACSESGSLAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIV 177
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTM+S Y ++A+ + M EG P+EIT SVL+AC +LD G K+H+L
Sbjct: 178 SWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNAC----DLDAGRKVHRLI 233
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++GL S + N LI MY +C ++ A VF I D+N++ W S+I G N + L
Sbjct: 234 EQSGLDSDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTL 293
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCG--KEIHAHALRIGVAFDGFLPNALLD 542
FFRKM+L+ K + TL+++L ACA+ L + IH A+ G+ D + AL+
Sbjct: 294 EFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVK 353
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ G K A F+S +D++AWN + + YA+ G+ A E +M
Sbjct: 354 IKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQM 402
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 215/451 (47%), Gaps = 14/451 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + + + GD A VF + +DL +WN + YAK G +A+ L ++M +
Sbjct: 347 VGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMK-LD 405
Query: 192 GVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
V+PD TF +L C G L+ GK+ H ++ GY D + AL+ MY CG L
Sbjct: 406 QVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRL 465
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A+LVF+ M RD ISW M+ Y + + + F ++ PD + L + + A
Sbjct: 466 DDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGAC 525
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ R+ H + ++G+ D V N L+++Y + G+ E+ + F + V+SW
Sbjct: 526 TNLSS---ARDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWN 582
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+I+ + PD+A + + ME +G PD +T+A+V+++ A L G +H +
Sbjct: 583 LLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEA 642
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIF 487
G+ ++A L++ Y KC A +F + NV++W S + + + EAL
Sbjct: 643 GMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHV 702
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMY 544
+M+ + P +VT VS+LS C G G + + +LR D + ++D+
Sbjct: 703 LAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHLFS-SLRWDYDMDPIPEHYGCMIDLL 761
Query: 545 VRCGRMKPAWNQFNS--NERDVSAWNILLTG 573
R G ++ A + D W LL+G
Sbjct: 762 ARGGWLEEARQLLKTMPTTPDSIKWMALLSG 792
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 184/408 (45%), Gaps = 10/408 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW---KRGYDEGLYLHSVVSKTMSHLS 129
+G L A++ + M+ + D+ V+++ C G + G H + + L
Sbjct: 389 HGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLD 448
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
LG A + M+ G L A VF KM RDL SW ++G Y +A DEA S+ R
Sbjct: 449 AVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEA-SITFRRIQ 507
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G PD L C +L ++ H + + G+E D V NAL+ +Y CG L
Sbjct: 508 LEGHTPDRVALIAALGAC---TNLSSARDFHERIRQLGWEKDPLVANALLEVYSACGSLE 564
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A FDG+ + ISWN +I+ + G + L M +PD +TL++VI++
Sbjct: 565 DANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRA 624
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD-VVSWT 368
+ + G+ +H +++ G D V L+ Y G+ +F + + D VV+W
Sbjct: 625 SLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWN 684
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMR 427
+ ++ Y S +A+ M +G P +T SVLS C G D+G L L
Sbjct: 685 STLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHLFSSLRWD 744
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
+ +ID+ ++ +++A ++ +P + I W +++ G
Sbjct: 745 YDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTPDSIKWMALLSG 792
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+A+ L AC L G +LH + GL + +AN ++ MY CK +D A +VF ++
Sbjct: 14 LAASLRACHTLPK---GKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMA 70
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
++ W ++ EA F +M+ + P+ VTL+++++AC+ G+L G+
Sbjct: 71 SRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRR 130
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERG 578
+H + + AL+ MY +CG + A F++ +++ +W +++ Y ERG
Sbjct: 131 VHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERG 190
Query: 579 QGALAEEFFRKMI 591
A F +M+
Sbjct: 191 CLEQALTLFIEML 203
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+L + L + L AC L GKE+HA + G+ + L N ++ MY+ C +
Sbjct: 4 VLTISTTVTDLAASLRACH---TLPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVD 60
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F+ RD W ++ YA G A F +M+D
Sbjct: 61 NARKVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLD 102
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 236/449 (52%), Gaps = 13/449 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN+ L+M+ K G + A F M R++ SW+ ++ YA+ G D+AL L+Q+M
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKM-EEE 70
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P+ TF VL C +++G+ +H V R + + V AL+ MY KC L+ A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFDG+ ++D ++W+ MIS Y + G + + LF M V P+ + L S++ A
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSA 190
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G G+ H V+ GF DVS N LIKMY G+ + VF ME +D++SW+ M+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ A ++ M+ EG PD +T S+L AC+ LG L G +H G
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQ 310
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + I N+LIDMY KC + A E+F ++ +NVI+WT++I + + EAL F +M
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
++P+ V +SI+ +C+ G + +E + L++ V F P +LD+
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLV---EEGRIYFLKM-VEDQSFTPGVEHFVGMLDLLG 426
Query: 546 RCGRMKPAWN--QFNSNERDVSAWNILLT 572
R G++ A +F E V WN LL+
Sbjct: 427 RSGKLNEAEELMEFMPVEPGVVGWNTLLS 455
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 193/359 (53%), Gaps = 2/359 (0%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KCG + AR F+ M R+ ISW+ M++ Y + G++ + L+LF M E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+P+ +T SV+ A + G +H V + + V L+ MY E
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEAR 131
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF + KDVV+W+TMIS Y +A++ + M +G P+EI + S+L AC+ G
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G H+L + G + + NTLI MY KC + A VF + +++ISW++++
Sbjct: 192 ALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLA 251
Query: 474 GLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ + +A + FR+M L +KP+ VT VS+L AC+ +GAL+ G IH G
Sbjct: 252 VIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQS 311
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ N+L+DMY +CG ++ A F+ + R+V W ++T + QG A E F +M
Sbjct: 312 VMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 9/416 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +QAL M+E + +E ++++ C ++G +H +V++ + + +G
Sbjct: 55 GDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVG 114
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K L A VF + ++D+ +W+ +I YA+ G EA+ L+ M + GV
Sbjct: 115 TALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMN-LDGV 173
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +L C L GK H V+ G+ ADV N LI MY KCGDL A+
Sbjct: 174 RPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKA 233
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF GM +RD ISW+AM++ E+G + F M V PD++T S++ A L+G
Sbjct: 234 VFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGA 293
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G +H + GF + + N LI MY G+ + ++F RM ++V++WTTMI+
Sbjct: 294 LVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITA 353
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG----IKLHQLAMRTG 429
+A+E ++ ME G PD++ S++ +C+ G ++ G +K+ + T
Sbjct: 354 CVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTP 413
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
+ + + ++D+ + +++A E+ +P + V+ W +++ + +N + A
Sbjct: 414 GVEHFV---GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERA 466
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
TGL + N+L++MY KC +++A E F + +NVISW++++ +AL+
Sbjct: 4 TGLCCGEFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVL 63
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM ++PN VT +S+L ACA A+ G+ IH R + + AL+ MY +
Sbjct: 64 FQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGK 123
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
C R+ A F+ E+DV W+ +++ YA+ G A + F M
Sbjct: 124 CSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYM 168
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + A + M + D V+L+ C EG +H+ + + +
Sbjct: 256 HGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYI 315
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ K G L A +F +M R++ +W +I + EAL L++ M G
Sbjct: 316 ENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM-EKAG 374
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
V+PD F ++ +C ++ G+ + ++ + V+ ++ + + G L A
Sbjct: 375 VQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEA 434
Query: 252 RLVFDGMP-KRDRISWNAMIS 271
+ + MP + + WN ++S
Sbjct: 435 EELMEFMPVEPGVVGWNTLLS 455
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 258/491 (52%), Gaps = 10/491 (2%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
++G +H + K + + N+ L M+ K G G+A +F +M +RD SWN +I G+
Sbjct: 56 NKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGF 115
Query: 172 AKAGFFDEALSLYQRMF-WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
++G + ++L +++RM GG + L +C + L G E+H +++ G ++
Sbjct: 116 CQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDS 175
Query: 231 DVDVVNALITMYVKCGDLVRARLVFD-----GMPKRDRISWNAMISGYFENGEYMKGLML 285
D +V+ALI MY+KCGD+ A VF+ + R+ WN MI GY N L L
Sbjct: 176 DEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALEL 235
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F+ M E+ + PD T+ V+ + D +G+++HG ++ +G DDV V L++MY
Sbjct: 236 FVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFK 295
Query: 346 FGNREEGEKVFSRMESKDVVSW-TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E ++F R ++ ++V W + M++C + P++A+E + + PD + + +
Sbjct: 296 CGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNG-YPNEALEFFSEFMLDCGFPDPVILLA 354
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L AC+ L G+ +H A++ G S + + L+D Y KC ++ A +VF+ + ++
Sbjct: 355 ALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRD 414
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
++SW ++I G N + EAL FR M +KPN+VT+ ILS C + ++ KE+H
Sbjct: 415 LVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHC 474
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
+ LR + + N+L+ Y +CG + + F R+ WN +L G+ G+
Sbjct: 475 YLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDE 534
Query: 583 AEEFFRKMIDS 593
F KM ++
Sbjct: 535 MFATFEKMKEA 545
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 239/440 (54%), Gaps = 9/440 (2%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ N +I + GFF++A+ +Y G + FPC+++ GG+ D+ +GK++
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H H+++FG+ D+ V N+L+ MY KCG A +F+ M +RD +SWN MISG+ ++G+Y
Sbjct: 62 HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDY 121
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCN 337
+K L++F M + ++ + + S + L G E+HG+++K G D + +
Sbjct: 122 VKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVS 181
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETYQMMEA 392
LI+MY+ G+ + E VF R+ ++V W MI Y + A+E + M
Sbjct: 182 ALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLE 241
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD T+ VL C+ L +L +G ++H L + GL + + L++MY KC +
Sbjct: 242 LGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPET 301
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACAR 511
+L++F + + N++ W S++L N EAL FF + ML+ P+ V L++ L AC+
Sbjct: 302 SLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSF 361
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ G IH A+++G D F+ AL+D Y +CG M+ A F + RD+ +WN L
Sbjct: 362 LSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNAL 421
Query: 571 LTGYAERGQGALAEEFFRKM 590
++G+A+ A + FR M
Sbjct: 422 ISGFAQNKCADEALKAFRDM 441
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 240/484 (49%), Gaps = 16/484 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-----RDLFSWNVL 167
GL +H + K L +A + M++K GD+ +A VF ++ D R++ WNV+
Sbjct: 160 HGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVM 219
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GY AL L+ M +G + PD T VL C + DL GK++H ++ G
Sbjct: 220 ILGYVSNECLSLALELFVEMLELG-ISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLG 278
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ DV V AL+ MY KCGD + +F + + W +++ +NG + L F
Sbjct: 279 LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFF- 337
Query: 288 MMREVLVD---PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
E ++D PD + L + + A + + G +HG+ IKMGF DV V L+ Y
Sbjct: 338 --SEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYG 395
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E ++VF + ++D+VSW +IS + + D+A++ ++ M+++ P+ +T+A
Sbjct: 396 KCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMAC 455
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+LS C L + L ++H +R + ++ N+LI Y+KC I + VF ++P +N
Sbjct: 456 ILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRN 515
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-KEIH 522
++W SI+LG ++ R+ E F KM N+KP+ T S+LS+C+ G + G K +
Sbjct: 516 EVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFN 575
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQG 580
+ + ++D+ R G + A++ S D W LL G
Sbjct: 576 SMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNT 635
Query: 581 ALAE 584
LAE
Sbjct: 636 KLAE 639
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 185/390 (47%), Gaps = 2/390 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L AL+ M EL I D +V ++ LC G +H ++ VR+
Sbjct: 226 NECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRV 285
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + M+ K GD + +F + + +L W ++ A+ G+ +EAL + G
Sbjct: 286 GTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD LR C + RG +H I+ G+++DV V AL+ Y KCGD+ A+
Sbjct: 346 F-PDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQ 404
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF G+ RD +SWNA+ISG+ +N + L F M+ + P+ +T++ ++S +
Sbjct: 405 QVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLS 464
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
L +EVH Y+++ F + V N LI Y G+ VF ++ ++ V+W +++
Sbjct: 465 VMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILL 524
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLI 431
+ D+ T++ M+ PD T S+LS+C+ G +D G K M L
Sbjct: 525 GFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLE 584
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ ++D+ + +++A ++ +P
Sbjct: 585 PRVEQYTCMVDLLGRAGNLNQAYDLIMSMP 614
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
++ A L +++ G ++H ++ G + I + N+L+ MY KC A+++F ++ +++
Sbjct: 45 LIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERD 104
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARIGALMCGKEI 521
+SW ++I G + ++L+ FR+M+ N V ++ LS+CA I L G EI
Sbjct: 105 SVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEI 164
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN---SNE---RDVSAWNILLTGYA 575
H ++ GV D FL +AL++MY++CG +K A N F NE R+++ WN+++ GY
Sbjct: 165 HGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYV 224
Query: 576 ERGQGALAEEFFRKMID 592
+LA E F +M++
Sbjct: 225 SNECLSLALELFVEMLE 241
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GK+IH H L+ G D F+ N+LL MY +CG A + F ERD +WN +++G+ +
Sbjct: 58 GKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117
Query: 577 RGQGALAEEFFRKMIDSKG 595
G + FR+M+ G
Sbjct: 118 SGDYVKSLVMFRRMVKECG 136
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 256/513 (49%), Gaps = 6/513 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C G +H V +T +V + A L M+ K G + + VF M RD
Sbjct: 145 VIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRD 204
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN ++ GY+ G F EA+ Q M G+ P+ T ++ CG D G +H
Sbjct: 205 LISWNAMVSGYSVNGCFREAVETLQEMQQC-GMSPNASTLVGIVGMCGSAGDRVAGDSLH 263
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G D + +ALI+MY DL +RLVFD P +D +S+N+MIS Y ++ +
Sbjct: 264 AFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWK 323
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVI-SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ +F +M V P+ +TL SV+ S S+L+ G VHG +IK+G ++ VSV + L
Sbjct: 324 EAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSAL 383
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G + +F K+ + W +MIS Y + + A++ + M+ G PD
Sbjct: 384 VSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDA 443
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T+ +V+S C +L + +H A+R SY + N L+ MY+ C I + +F +
Sbjct: 444 TTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQK 503
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
+ + +ISW ++I G S +L F +M + + VTL+ ++S+ + + G
Sbjct: 504 MEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVG 563
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
+ +H+ A++ G D L NAL+ MY CG ++ FNS R+ +N L++GY +
Sbjct: 564 ESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKN 623
Query: 578 GQGALAEEFFRKMI--DSKGNWRKLMGLFRKCQ 608
F +M+ D K N L+ L CQ
Sbjct: 624 NVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQ 656
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 240/456 (52%), Gaps = 8/456 (1%)
Query: 140 FVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+V FG A +F + ++S N+++ ++ GF E L LY+ + G D
Sbjct: 83 YVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDHGFHRELLDLYRGLC---GFGSDN 139
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TFP V+R C L+ G++VH V+R G+ ++V V AL+ MY K G + +R VFD
Sbjct: 140 FTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDC 199
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M RD ISWNAM+SGY NG + + + M++ + P+ TL ++ GD G
Sbjct: 200 MVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAG 259
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+H + +K G DD S+ + LI MY +F + VF KD+VS+ +MIS Y
Sbjct: 260 DSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQH 319
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGLISYIII 436
+A E +++M G P+ IT+ SVL +C+ L ++ G +H + ++ GL + +
Sbjct: 320 SNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSV 379
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
+ L+ MYSK +D + +F +KN I W S+I G +NN AL F KM + +
Sbjct: 380 VSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGV 439
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
P++ T+++++S C L K IHA+A+R + NALL MY CG + ++
Sbjct: 440 APDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYT 499
Query: 556 QFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F E R + +WN +++G+AE G + F +M
Sbjct: 500 LFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQM 535
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 270/531 (50%), Gaps = 7/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ +NG +A++ L MQ+ + + LV +V +C G LH+ K
Sbjct: 209 NAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALK 268
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L +A +SM+ F DL + VF +DL S+N +I Y + + EA +
Sbjct: 269 GGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEV 328
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ R+ GV P++ T VL +C + + G+ VH +I+ G V VV+AL++MY
Sbjct: 329 F-RLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMY 387
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K G L + L+F +++ I WN+MISGY N E+ L F M+ V PD T+
Sbjct: 388 SKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVI 447
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+VIS D + + +H Y ++ F SV N L+ MY G+ +F +ME +
Sbjct: 448 NVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVR 507
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
++SW TMIS + + ++ + M E D +T+ ++S+ + + +G +H
Sbjct: 508 MLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVH 567
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
LA+++G IS + + N LI MY+ C ++ ++F+ +N I++ +++ G R NN S
Sbjct: 568 SLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSE 627
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+ L F +M+ N KPN VTL+++L C + + GK IH++A+R + L + +
Sbjct: 628 KILPLFTQMVKNDEKPNLVTLLNLLPVCQ---SQLQGKCIHSYAVRNFTRLETPLFTSAM 684
Query: 542 DMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
MY R ++ F+ + R++ WN L+ + Q + ++F+ M+
Sbjct: 685 GMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHML 735
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 247/486 (50%), Gaps = 6/486 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
G + G +H ++ K V + +A +SM+ K G L + +F +++ WN +I
Sbjct: 357 GINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMIS 416
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
GY ++ AL + +M + GV PD T V+ C DL K +H + +R +E
Sbjct: 417 GYLVNNEWNMALDAFCKM-QIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFE 475
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V+NAL+ MY CGD+ + +F M R ISWN MISG+ E G+ L LF M
Sbjct: 476 SYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQM 535
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
V D +TL +IS+ + D +G VH IK G DVS+ N LI MY + G
Sbjct: 536 FHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIV 595
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E G+++F+ S++ +++ ++S Y + + +K + + M P+ +T+ ++L C
Sbjct: 596 EAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L G +H A+R + + + MYS+ I+ +F + +N+I W
Sbjct: 656 Q--SQLQ-GKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWN 712
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+ + ++ + +F+ M+ LN++P+ VT+++++SAC+++G I A L+
Sbjct: 713 AFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQK 772
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFF 587
G + + + NAL+D + RCG + A F+S+ E+D W ++ Y+ G G A + F
Sbjct: 773 GFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLF 832
Query: 588 RKMIDS 593
MIDS
Sbjct: 833 SMMIDS 838
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 250/500 (50%), Gaps = 18/500 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD--EGLYLHSVV 121
NS ++ +N AL MQ + D ++N++ C + + + ++ ++V
Sbjct: 412 NSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVR 471
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
++ S+ SV NA L+M+ GD+ ++ +F KM R L SWN +I G+A+ G + +L
Sbjct: 472 NRFESYQSVM--NALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSL 529
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+L+ +MF V D+ T ++ + D G+ VH I+ G +DV + NALITM
Sbjct: 530 TLFCQMFH-EEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITM 588
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y CG + + +F+ R+ I++NA++SGY +N K L LF M + P+ +TL
Sbjct: 589 YANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTL 648
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+++ + + G+ +H Y ++ + + + MY F N E +FS + +
Sbjct: 649 LNLLPVCQ---SQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSA 705
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
++++ W +S D V+ ++ M PDE+T+ +++SAC+ LGN D +
Sbjct: 706 RNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACI 765
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
+ ++ G I++ N LID +S+C I A E+F +K+ ++W ++I ++
Sbjct: 766 MAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNG 825
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-- 538
AL F M+ + P+ +T VSILSAC+ G + G+ + + A G P
Sbjct: 826 EAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTL----FKSLQADHGITPRME 881
Query: 539 ---ALLDMYVRCGRMKPAWN 555
++D+ R G + A++
Sbjct: 882 HYACMVDLLGRTGHLDEAYD 901
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 7/383 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF-DGMPKRDRI-SWNAMI 270
LK +E+H + G D VV L+ YV G A L+F + R + S N ++
Sbjct: 54 LKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVV 113
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+ ++G + + L L+ + D T VI A +LGR+VH V++ G
Sbjct: 114 RCFSDHGFHRELLDLYRGL--CGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHG 171
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+V V L+ MY G + +VF M +D++SW M+S Y + +AVET Q M
Sbjct: 172 SNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEM 231
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ G P+ T+ ++ C G+ G LH A++ G I + + LI MY+ +
Sbjct: 232 QQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDL 291
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSAC 509
+ VF P K+++S+ S+I ++ EA FR M + PN +TLVS+L +C
Sbjct: 292 SSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSC 351
Query: 510 AR-IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
+ + + G+ +H +++G+A + +AL+ MY + G++ + F E++ W
Sbjct: 352 SDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILW 411
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
N +++GY + +A + F KM
Sbjct: 412 NSMISGYLVNNEWNMALDAFCKM 434
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 176/389 (45%), Gaps = 5/389 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E +L M + D L+ L+ G +HS+ K+ V L
Sbjct: 523 GDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLT 582
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M+ G + +F C R+ ++N L+ GY K ++ L L+ +M
Sbjct: 583 NALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVK-NDE 641
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP++ T +L C +GK +H + +R + + + + MY + ++ R
Sbjct: 642 KPNLVTLLNLLPVC---QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRT 698
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F + R+ I WNA +S + + + F M + V PD +T+ ++ISA +G+
Sbjct: 699 IFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGN 758
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ +++ GFS ++ V N LI + G+ ++F KD V+W MI+
Sbjct: 759 ADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINA 818
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLIS 432
Y + A++ + MM G PD+IT S+LSAC+ G ++ G L + L G+
Sbjct: 819 YSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITP 878
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ ++D+ + +D+A ++ +P
Sbjct: 879 RMEHYACMVDLLGRTGHLDEAYDIVRSMP 907
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 249/471 (52%), Gaps = 3/471 (0%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M H +V N + ++K G+L A +F M R + +W +LIGGYA+ F EA +L+
Sbjct: 68 MPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLF 127
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G V PD T +L + +VH HV++ GY++ + V N+L+ Y K
Sbjct: 128 ADMCRHGMV-PDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCK 186
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
L A +F M ++D +++NA+++GY + G + LF M+++ P T ++V
Sbjct: 187 TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAV 246
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++A + D + G++VH +V+K F +V V N L+ Y E K+F M D
Sbjct: 247 LTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDG 306
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+S+ +I+C + ++++E ++ ++ + A++LS A NL++G ++H
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ 366
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A+ T IS +++ N+L+DMY+KC +A +F + ++ + WT++I G +
Sbjct: 367 AIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG 426
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F +M + +S T SIL ACA + +L GK++H+ +R G + F +AL+DM
Sbjct: 427 LKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDM 486
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
Y +CG +K A F R+ +WN L++ YA+ G G A F +MI S
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHS 537
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 217/403 (53%), Gaps = 2/403 (0%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+E +H V K ++ + N+ L + K LG A ++F M ++D ++N L+ GY
Sbjct: 156 NEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGY 215
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+K GF +A++L+ +M +G +P +TF VL + D++ G++VH V++ + +
Sbjct: 216 SKEGFNHDAINLFFKMQDLG-FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWN 274
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V V NAL+ Y K +V AR +F MP+ D IS+N +I+ NG + L LF ++
Sbjct: 275 VFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQF 334
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
D ++++S + + ++GR++H I +V V N L+ MY E
Sbjct: 335 TRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGE 394
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++F+ + + V WT +IS Y L + ++ + M D T AS+L ACA
Sbjct: 395 ANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACAN 454
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L +L LG +LH +R+G +S + + L+DMY+KC I +AL++F ++P +N +SW ++
Sbjct: 455 LASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNAL 514
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
I N AL F +M+ + L+PNSV+ +SIL AC+ G
Sbjct: 515 ISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCG 557
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 195/425 (45%), Gaps = 34/425 (8%)
Query: 204 LRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L G + KR + V +I+ G++ + N + +++ GDL AR +FD MP ++
Sbjct: 13 LHNLGTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKN 72
Query: 263 RISWNAMISGYFENG-------------------------------EYMKGLMLFIMMRE 291
IS N MI GY ++G +++ LF M
Sbjct: 73 VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR 132
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD +TL++++S +VHG+V+K+G+ + VCN L+ Y +
Sbjct: 133 HGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGL 192
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F M KD V++ +++ Y A+ + M+ G P E T A+VL+A
Sbjct: 193 ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ +++ G ++H ++ + + +AN L+D YSK I +A ++F+++P+ + IS+ +
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I N R E+L FR++ ++LS A L G++IH+ A+
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRK 589
+ + N+L+DMY +C + A F S W L++GY ++G + F +
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 590 MIDSK 594
M +K
Sbjct: 433 MHRAK 437
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 190/385 (49%), Gaps = 4/385 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS V K +V + NA L + K + A +F +M + D S+NVLI A
Sbjct: 259 GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAW 318
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G +E+L L++ + + + + F +L +L+ G+++H I ++V
Sbjct: 319 NGRVEESLELFRELQFTRFDRRQ-FPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL 377
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KC A +F + + + W A+ISGY + G + GL LF+ M
Sbjct: 378 VGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAK 437
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D T +S++ A + LG+++H +I+ G +V + L+ MY G+ +E
Sbjct: 438 IGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEAL 497
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++F M ++ VSW +IS Y + A+ +++ M G P+ ++ S+L AC+ G
Sbjct: 498 QMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCG 557
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G++ + + L +++DM + D+A ++ ++P + + I W+SI
Sbjct: 558 LVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSI 617
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLK 496
+ R+ +++ E I + N+K
Sbjct: 618 LNSCRI-HKNQELAIKAADQLFNMK 641
>gi|297841913|ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334679|gb|EFH65097.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 302/593 (50%), Gaps = 20/593 (3%)
Query: 12 TPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNA-QSVQVLNTQNTSSIATKNPNSRLNEL 70
P + R +TR P TS KPK F ++A S L+++N SI + +
Sbjct: 33 APAKSPFRPSRTRRPSTSPAKKPKP--FRERDAFPSSLPLHSKNPHSI-----HRDIQRF 85
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG--LYLHSVVSKTMSHL 128
+LE AL LD +++ I V+ L+ C ++ G +++H ++ S+
Sbjct: 86 ARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNE 145
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFDEALSLYQR 186
+R + M+ G + A VF + +++SWN L+ G +G + + LS +
Sbjct: 146 FIR--TKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 203
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +G V +VY+F V ++ G L++G + H I+ G V + +L+ MY KCG
Sbjct: 204 MRELG-VDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 262
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVI 305
+ AR VFD + +RD + W AMI+G N + L LF M+ E + P+ + L++++
Sbjct: 263 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMISEEGIYPNSVILTTIL 322
Query: 306 SASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
V KLG+EVH +V+KM + + V + LI +Y G+ G +VF + ++
Sbjct: 323 PVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNA 382
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SWT ++S Y + D+A+ + M+ EG PD +TIA+VL CA L + G ++H
Sbjct: 383 ISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCY 442
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A++ + + + +L+ MYSKC + + +F ++ +NV +WT++I N
Sbjct: 443 ALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAG 502
Query: 485 LIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FR M+L+ +P+SVT+ +L+ C+ + AL GKE+H H L+ F+ ++ M
Sbjct: 503 IEVFRSMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKM 562
Query: 544 YVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMIDSKG 595
Y +CG ++ A F++ S W ++ Y G+ A + F +M+ S+G
Sbjct: 563 YGQCGDLRSANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMV-SRG 614
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 238/476 (50%), Gaps = 4/476 (0%)
Query: 40 SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALV 99
S ++AQ +V + +S++ + N R + + L M+EL + ++ +
Sbjct: 160 SVRDAQ--KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSFS 217
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
N+ + +GL H++ K SV L + + M+ K G +G A VF ++ +R
Sbjct: 218 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 277
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ W +I G A EAL L++ M G+ P+ +L G V LK GKEV
Sbjct: 278 DIVVWGAMIAGLAHNKRQWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEV 337
Query: 220 HVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H HV++ Y V + LI +Y KCGD+V R VF G +R+ ISW A++SGY NG
Sbjct: 338 HAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGR 397
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ + L + M++ PD +T+++V+ + K G+E+H Y +K F +VS+
Sbjct: 398 FDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 457
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G E ++F R+E ++V +WT MI CY + +E ++ M PD
Sbjct: 458 LMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPD 517
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T+ VL+ C+ L L LG +LH ++ S ++ +I MY +C + A F
Sbjct: 518 SVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQCGDLRSANFSFD 577
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+ K ++WT+II N R +A+ F +M+ PN+ T +ILS C++ G
Sbjct: 578 AVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAILSICSQAG 633
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 254/484 (52%), Gaps = 42/484 (8%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A +VF ++ L WN +I G +K+ ++A+ Y M++ G++ TF + +
Sbjct: 22 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYY-KGIQGSHLTFIFLFK 80
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+C V D+++G+ V VH ++ G+E+ V NALI MYV G+L A+ VFDGM +RD +S
Sbjct: 81 SCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVS 140
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN++I GY++ + K L LF M+ + V D +T+ ISA+ + + ++G + Y+
Sbjct: 141 WNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID 200
Query: 326 KMGFSDDVSVCNPLIKMY-------------------------------LSFGNREEGEK 354
+ G D+ + N LI MY GN +K
Sbjct: 201 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKK 260
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F+ M S+DV+SWT+MI Y + +AV+ +Q M PDEIT+A+ LSACA LG+
Sbjct: 261 LFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGS 320
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
LD G +H + + S + + N+LIDMY KC ++KAL+VF+ + ++ +SWTSII G
Sbjct: 321 LDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISG 380
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL----RIG 529
L +N + AL F +M+ + P T V +L ACA +G + G E H ++ R+
Sbjct: 381 LAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFKSMENTYRLA 439
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFF 587
+ ++D+ R G + A+N DV W ILL+ G LAE
Sbjct: 440 PEMKHY--GCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVS 497
Query: 588 RKMI 591
+K++
Sbjct: 498 KKLL 501
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 190/401 (47%), Gaps = 35/401 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA + M+V FG+L A VF M +RD+ SWN +I GY + F + L L++ M +
Sbjct: 109 VSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAIN 168
Query: 192 GVKPDVYTFPCVLRTC------------------GGVPDLKRGKEVHVHVIRFGY----- 228
V + TC G V DL G + R G
Sbjct: 169 VRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAG 228
Query: 229 -------EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
E ++ NA+I Y K G+LV A+ +F+ MP RD ISW +MI GY ++ +
Sbjct: 229 RVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAE 288
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M +V PD +T+++ +SA +G G VH Y+ K DV V N LI
Sbjct: 289 AVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLID 348
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G E+ +VF+ M+++D VSWT++IS + + A+ + M EG P T
Sbjct: 349 MYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGT 408
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
VL ACA +G +D G++ H +M L + ++D+ + +D A +
Sbjct: 409 FVGVLLACAHVGLVDKGVE-HFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKK 467
Query: 460 IPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+P +V+ W ++ +L+ A I +K+++ L P++
Sbjct: 468 MPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLV-LDPSN 507
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
++ L MQ +N+ D ++ + + ++ G YL + + + + LGN
Sbjct: 154 FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNT 213
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------FFD---------- 178
+ M+ + G + A VF +M ++++ SWN +I GYAK G F+
Sbjct: 214 LIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 273
Query: 179 --------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
EA+ L+Q M V VKPD T L C + L G+ VH ++
Sbjct: 274 TSMIIGYSLAKQHAEAVKLFQEMM-VSMVKPDEITVATALSACAHLGSLDAGEAVHDYIR 332
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ ++DV V N+LI MY KCG + +A VF+ M RD +SW ++ISG NG L
Sbjct: 333 KHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALN 392
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVG 312
+F M + + P T V+ A VG
Sbjct: 393 VFDQMLKEGICPTHGTFVGVLLACAHVG 420
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+K M + DE + + C D G +H + K V +GN+ +
Sbjct: 288 EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLI 347
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G + A VF M RD SW +I G A GF + AL+++ +M G+ P
Sbjct: 348 DMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQML-KEGICPTH 406
Query: 198 YTFPCVLRTCGGVPDLKRGKE 218
TF VL C V + +G E
Sbjct: 407 GTFVGVLLACAHVGLVDKGVE 427
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 222/396 (56%), Gaps = 3/396 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S++ FG + A +F ++ + DL+SW V+I Y + E + Y +
Sbjct: 124 LVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEY 183
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D F VL+ C + + G+++H +++ G D V+ L+ MY KC ++ +R VF
Sbjct: 184 DNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVF 242
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + R+ + W +MI GY +N +GL+LF MRE LV+ + TL S+++A +G
Sbjct: 243 DEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALH 302
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ VHGYVIK GF + + PL+ +Y G+ + VF + + D+VSWT MI Y
Sbjct: 303 QGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYA 362
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
P +A++ + + +P+ +T +SVLSACA G+L++G +H L ++ G
Sbjct: 363 QRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDAT 421
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
N L+DMY+KC I A VF + DK+VI+W SII G N ++EAL F +M +
Sbjct: 422 FENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS 481
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ P+++TLVS+LSACA +GA G +H +A++ G+
Sbjct: 482 VYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGL 517
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 248/531 (46%), Gaps = 63/531 (11%)
Query: 72 LNGSLEQALKYLDSMQELNICVDE-DALVN--LVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
LN S + +++ ++ L C++E D +V +++ C R DEG LH + K S
Sbjct: 161 LNDSYSEIVQFYNT--RLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPD 218
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S L + M+ K ++ + VF ++ DR++ W +I GY + E L L+ RM
Sbjct: 219 SFVL-TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMR 277
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G V+ + YT ++ C + L +GK VH +VI+ G++ + +V L+ +Y KCGD+
Sbjct: 278 -EGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDI 336
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VFD + D +SW AMI GY + G + L LF R + P+ +T SSV+SA
Sbjct: 337 RDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSAC 396
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G +GR VH IK+G S+D + N L+ MY + VF + KDV++W
Sbjct: 397 AQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWN 455
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++IS Y + +A+E + M ++ PD IT+ SVLSACA +G +G LH A++
Sbjct: 456 SIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKA 515
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL+S R +RS E +F
Sbjct: 516 GLLSG------------------------------------------RDCSRSLE--LFG 531
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDM 543
+ L+PN V +ILSAC+ G L G ++ F+P+ ++D+
Sbjct: 532 DMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVY----NFVPSMKHYACMVDL 587
Query: 544 YVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR++ A + + DVS L G + L E R+M++
Sbjct: 588 LARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLE 638
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 208/398 (52%), Gaps = 16/398 (4%)
Query: 201 PC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
PC +L C V L++ +H ++ G D+ L+++Y G + ARL+FD +
Sbjct: 88 PCFSLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRI 144
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLG 317
D SW MI YF N Y + + + +R+ L + D + S V+ A + + G
Sbjct: 145 RNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEG 204
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EG 376
R++H ++K+G S D V L+ MY E+ +VF + ++VV WT+MI Y +
Sbjct: 205 RKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 263
Query: 377 SVLPDKAVETYQMMEA--EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
L + V +M E EG ++ T+ S+++AC LG L G +H +++G
Sbjct: 264 DCLKEGLVLFNRMREGLVEG---NQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNS 320
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMML 493
+ L+D+Y KC I A VF ++ +++SWT++I+G EAL +F +
Sbjct: 321 FLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWK 380
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+L PN+VT S+LSACA+ G+L G+ +H +++G + D NAL+DMY +C + A
Sbjct: 381 DLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDA 439
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + ++DV AWN +++GY + G A E F +M
Sbjct: 440 RYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQM 477
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/491 (32%), Positives = 247/491 (50%), Gaps = 48/491 (9%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 81 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPF 139
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L++C K G+++H HV++ GY+ D+ V +LI++YV+ G L AR VFD P RD
Sbjct: 140 LLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD 199
Query: 263 RIS-------------------------------WNAMISGYFENGEYMKGLMLFIMMRE 291
+S WNAMISGY E G Y + L LF M +
Sbjct: 200 VVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD T+ +V+SA G +LGR+VH ++ GF ++ + N L+ +Y G E
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW T+I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379
Query: 412 LGNLDLGIKLH-----QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
LG +D+G +H +L T S + +LIDMY+KC I+ A +VF+ I K++
Sbjct: 380 LGAIDIGRWIHVYIDKRLKSATNASS---LRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 467 SWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIH--- 522
SW ++I G ++ R+ A IF R + ++P+ +T V +LSAC+R G L G+ I
Sbjct: 437 SWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQG 580
+I + + ++D+ G K A N+ E D W LL RG
Sbjct: 497 TQDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNV 554
Query: 581 ALAEEFFRKMI 591
L E F + +I
Sbjct: 555 ELGESFAQNLI 565
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 220/426 (51%), Gaps = 41/426 (9%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV---KCGDLVRARLVFDGMP 259
+L C + L+ +H +I+ G ++ L+ + V L A VF+ +
Sbjct: 39 LLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQ 95
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ + + WN M G+ + + + L L++ M + + P+ T ++ + K G++
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--------------------- 358
+HG+V+K+G+ D+ V LI +Y+ G E+ KVF R
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215
Query: 359 MES----------KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ES KDVVSW MIS Y + +A+E ++ M PDE T+ +V+SA
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
CA G+++LG ++H G S + I N+L+D+YSKC ++ A +F + K+VISW
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA-L 526
++I G N EAL+ F++M+ + +PN VT++SIL ACA +GA+ G+ IH +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 527 RIGVAFDG-FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAE 584
R+ A + L +L+DMY +CG ++ A FNS + +S+WN ++ G+A G+ A
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455
Query: 585 EFFRKM 590
+ F +M
Sbjct: 456 DIFSRM 461
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 177/373 (47%), Gaps = 34/373 (9%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
ALK M L + + L++ C + + EG +H V K L + + + +S
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLIS 177
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFS-------------------------------WNVL 167
++V+ G L A VF + RD+ S WN +
Sbjct: 178 VYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAM 237
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GYA+ G + EAL L++ M ++PD T V+ C ++ G++VH + G
Sbjct: 238 ISGYAETGNYKEALELFKEMMKTN-IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 296
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ +++ +VN+L+ +Y KCG+L A +F+G+ +D ISWN +I GY Y + L+LF
Sbjct: 297 FGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLS 345
M P+ +T+ S++ A +G +GR +H Y+ K ++ S+ LI MY
Sbjct: 357 EMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAK 416
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ E +VF+ + K + SW MI + D A + + M G PD+IT +
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGL 476
Query: 406 LSACACLGNLDLG 418
LSAC+ G LDLG
Sbjct: 477 LSACSRSGMLDLG 489
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 164/362 (45%), Gaps = 36/362 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + NI DE +V +V C + G +HS +
Sbjct: 235 NAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDD 294
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ N+ + ++ K G+L A +F + +D+ SWN LIGGY + EAL L
Sbjct: 295 HGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD--VDVVNALITM 241
+Q M G +P+ T +L C + + G+ +HV++ + A + +LI M
Sbjct: 355 FQEML-RSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDM 413
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ + + SWNAMI G+ +G +F MR++ ++PD +T
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF 473
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + K+ ++E
Sbjct: 474 VGLLSACSRSGMLDLGRHI-------------------------FRTMTQDYKITPKLE- 507
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ MI S L +A E ME E PD + S+L AC GN++LG
Sbjct: 508 ----HYGCMIDLLGHSGLFKEAEEMINNMEME---PDGVIWCSLLKACKIRGNVELGESF 560
Query: 422 HQ 423
Q
Sbjct: 561 AQ 562
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 38/337 (11%)
Query: 295 DPDFMTLSSVISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNR 349
DP + +L + S S L + L R +H +IK G + + L+++ + F
Sbjct: 25 DPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGL 84
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
VF ++ +++ W TM + S P A++ Y M + G +P+ T +L +C
Sbjct: 85 PYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSC 144
Query: 410 ACLGNLDLGIKLH----------QLAMRTGLISY---------------------IIIAN 438
A G ++H L + T LIS ++
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYT 204
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LI Y+ I+ A ++F +IP K+V+SW ++I G EAL F++MM N++P
Sbjct: 205 ALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRP 264
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T+V+++SACA+ G++ G+++H+ G + + N+L+D+Y +CG ++ A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLF 324
Query: 558 NSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 325 EGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T S Y LP + Y + S+ S+L C L +L L +H ++
Sbjct: 9 TVPSSSYPFHFLPSSSDPPYDSLRNHPSL-------SLLHNCKTLQSLRL---IHAQMIK 58
Query: 428 TGLISYIIIANTLIDMYSKCKCIDK---ALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
TGL + + L+++ D A+ VF I + N++ W ++ G L++ A
Sbjct: 59 TGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSA 118
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L + M+ L L PNS T +L +CA+ A G++IH H L++G D F+ +L+ +
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISV 178
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRK-----------MI 591
YV+ GR++ A F+ S RDV ++ L+ GYA RG A++ F + MI
Sbjct: 179 YVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMI 238
Query: 592 D---SKGNWRKLMGLFRK 606
GN+++ + LF++
Sbjct: 239 SGYAETGNYKEALELFKE 256
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 267/512 (52%), Gaps = 11/512 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+ A N ++ C K G LH + K L + N L+M+VK L A +F
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M +R+ S+ LI GYA++ F EA+ L+ R+ G + + + F +L+ +
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGH-ELNPFVFTTILKLLVSMDCG 155
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G +H + + G+E++ V ALI Y CG + AR VFDG+ +D +SW M++ +
Sbjct: 156 ELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCF 215
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
EN + + L LF MR V P+ T +SV A + +G+ VHG +K + D+
Sbjct: 216 AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDL 275
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V L+ +Y G+ ++ F + KDV+ W+ MI+ Y S +AVE + M
Sbjct: 276 YVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQA 335
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+P++ T ASVL ACA + L+LG ++H ++ GL S + ++N L+D+Y+KC ++ +
Sbjct: 336 LVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 395
Query: 454 LEVFHQIPDKN-VISWTSIILG-LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
+ +F + P +N V W ++I+G ++L + +F + ++ VT S L ACA
Sbjct: 396 MXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 455
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNIL 570
+ AL G +IH+ ++ D + NAL+DMY +CG +K A F+ N++D +WN +
Sbjct: 456 LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAM 515
Query: 571 LTGYAERG-----QGAL--AEEFFRKMIDSKG 595
++GY+ G G L + +F MI G
Sbjct: 516 ISGYSMHGLACANAGLLDQGQAYFTSMIQDHG 547
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 226/430 (52%), Gaps = 8/430 (1%)
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKP---DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+++ GF ++ L Q +VG V P + + + L+ C + RGK +H +++ G
Sbjct: 11 FSRRGFSVQSAKLTQE--FVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG 68
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
D+ N L+ MYVK L A +FD MP+R+ IS+ +I GY E+ +++ + LF+
Sbjct: 69 GCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFV 128
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
+ + + ++++ + +LG +H + K+G + V LI Y G
Sbjct: 129 RLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCG 188
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +VF + KD+VSWT M++C+ + +A++ + M G P+ T ASV
Sbjct: 189 RVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFK 248
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC L D+G +H A+++ + + L+D+Y+K ID A F +IP K+VI
Sbjct: 249 ACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIP 308
Query: 468 WTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W+ +I +++S EA+ +FF+ + PN T S+L ACA + L G +IH H +
Sbjct: 309 WSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAERGQGALAE 584
+IG+ D F+ NAL+D+Y +CGRM+ + F + + DV+ WN ++ G+ + G G A
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKAL 428
Query: 585 EFFRKMIDSK 594
F M++ +
Sbjct: 429 RLFLNMLEYR 438
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 154/303 (50%), Gaps = 2/303 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++ALK M+ + + ++ + C +D G +H K+ L + +
Sbjct: 218 NDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYV 277
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L ++ K GD+ A F ++ +D+ W+ +I YA++ EA+ ++ +M
Sbjct: 278 GVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ-AL 336
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +TF VL+ C + L G ++H HVI+ G +DV V NAL+ +Y KCG + +
Sbjct: 337 VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSM 396
Query: 253 LVFDGMPKRDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F P R+ ++ WN +I G+ + G+ K L LF+ M E V +T SS + A +
Sbjct: 397 XLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASL 456
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G ++H +K F D+ V N LI MY G+ ++ VF M +D VSW MI
Sbjct: 457 AALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMI 516
Query: 372 SCY 374
S Y
Sbjct: 517 SGY 519
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A++ M++ + ++ ++++ C G + G +H V K H V + NA
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 137 LSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ ++ K G + ++ +F + R D+ WN +I G+ + G ++AL L+ M V+
Sbjct: 383 MDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYR-VQA 441
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
T+ LR C + L+ G ++H ++ ++ D+ V NALI MY KCG + ARLVF
Sbjct: 442 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 501
Query: 256 DGMPKRDRISWNAMISGYFENG 277
D M K+D +SWNAMISGY +G
Sbjct: 502 DLMNKQDEVSWNAMISGYSMHG 523
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL+ +M E + E + +R C + GL +HS+ KT + +
Sbjct: 422 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 481
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY-------AKAGFFDEALSLYQR 186
NA + M+ K G + A VF M +D SWN +I GY A AG D+ + +
Sbjct: 482 NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAYFTS 541
Query: 187 MFWVGGVKPDVYTFPCVLRTCG 208
M G++P + + C++ G
Sbjct: 542 MIQDHGIEPCIEHYTCMVWLLG 563
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 263/529 (49%), Gaps = 21/529 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
+G ++A+ MQ+ + D + +++ C +G +H+ +V + SV
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV- 164
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L ++ G + A +F KM +RDL SWN I A++G AL L+QRM +
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRM-QLE 222
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P T L C + ++ + +H V G E + V AL + Y + G L +A
Sbjct: 223 GVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQA 279
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ VFD +RD +SWNAM+ Y ++G + +LF M + P +TL ++AS
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGC 336
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR +HG ++ G D+ + N L+ MY G+ EE +F R+ + VSW TMI
Sbjct: 337 SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMI 395
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC----LGNLDLGIKLHQLAMR 427
+ +AVE +Q M+ EG P T ++L A A + G KLH +
Sbjct: 396 AGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS 455
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQ--IPDK-NVISWTSIILGLRLNNRSFEA 484
G S I ++ MY+ C ID+A F + + D+ +V+SW +II L + A
Sbjct: 456 CGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L FFR+M L+ + PN +T V++L ACA AL G+ +H H G+ + F+ AL M
Sbjct: 516 LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASM 575
Query: 544 YVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y RCG ++ A F + ERDV +N ++ Y++ G A + F +M
Sbjct: 576 YGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRM 624
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 245/502 (48%), Gaps = 20/502 (3%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV L+R R +G +H+ + L LGN L +++K LG VF ++
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSL--GLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD SW +I Y + G A+ ++ RM GV+ D TF VL+ C + DL +G+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRM-QQEGVRCDAVTFLAVLKACARLGDLSQGR 148
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H ++ G + + N L+ +Y CG + A L+F+ M +RD +SWNA I+ ++G
Sbjct: 149 SIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSG 207
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L LF M+ V P +TL ++ + + + +H V + G + V
Sbjct: 208 DLGIALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQTLVVST 264
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L Y G+ + ++VF R +DVVSW M+ Y +A + M EG P
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP 324
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
++T+ + + C+ +L G +H A+ GL I++ N L+DMY++C ++A +F
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA----RI 512
+IP N +SW ++I G + A+ F++M L + P T +++L A A
Sbjct: 382 KRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN----SNERDVSAWN 568
A+ G+++H+ + G A + + A++ MY CG + A F + DV +WN
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
+++ ++ G G A FFR+M
Sbjct: 501 AIISSLSQHGHGKRALGFFRRM 522
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 226/458 (49%), Gaps = 17/458 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G L AL+ MQ + LV + +C R + +H +V ++ ++ +
Sbjct: 206 SGDLGIALELFQRMQLEGVRPARITLVIALTVCATIR---QAQAIHFIVRESGLEQTLVV 262
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A S + + G L A VF + +RD+ SWN ++G YA+ G EA L+ RM G
Sbjct: 263 STALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG- 321
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P T + G L+ G+ +H + G + D+ + NAL+ MY +CG AR
Sbjct: 322 ISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT----LSSVISAS 308
+F +P + +SWN MI+G + G+ + + LF M+ + P T L +V S
Sbjct: 379 HLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNP 437
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESK-DVV 365
E GR++H ++ G++ + ++ ++KMY S G +E F R ME + DVV
Sbjct: 438 EEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVV 497
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +IS +A+ ++ M+ G P++IT +VL ACA L G +H
Sbjct: 498 SWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL 557
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
+G+ S + +A L MY +C ++ A E+F ++ +++V+ + ++I N + EA
Sbjct: 558 RHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617
Query: 485 L-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
L +F+R +P+ + VS+LSAC+ G G EI
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 11/286 (3%)
Query: 311 VGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
GD++L GR +H ++ +G +++ N L+++YL + + E+VFSR+E +D SW
Sbjct: 39 AGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASW 96
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TT+I+ Y +A+ + M+ EG D +T +VL ACA LG+L G +H +
Sbjct: 97 TTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVE 156
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+GL ++AN L+ +Y C C+ A+ +F ++ +++++SW + I + AL
Sbjct: 157 SGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALEL 215
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M L ++P +TLV L+ CA I + IH G+ + AL Y R
Sbjct: 216 FQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTLVVSTALASAYAR 272
Query: 547 CGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G + A F+ + ERDV +WN +L YA+ G + A F +M+
Sbjct: 273 LGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 256/507 (50%), Gaps = 24/507 (4%)
Query: 101 LVRLCEWKRGYDEGLYLHSV-VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
L++ C + EG +HS+ V + ++ LGN +SM+ G A F + R
Sbjct: 49 LLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQR 108
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+L+SW L+ +A +G E L +RM GV+PD TF L +CG L+ G +
Sbjct: 109 NLYSWTGLVAAFAISGQSKETLRALERMRQ-DGVRPDAVTFITALGSCGDPESLRDGIRI 167
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENG- 277
H V+ E D V NAL+ MY KCG L A+ VF M + R+ ISW+ M + +G
Sbjct: 168 HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGN 227
Query: 278 --EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
E ++ +++ +T+ S S+ LV D GR +H + GF ++ V
Sbjct: 228 VWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD---GRLIHSCIALSGFESELLV 284
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
N ++ MY G EE KVF M+ +DVVSW M+S Y + A++ YQ M+
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLR 344
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D++T S+LSAC+ ++ LG LH+ + L +I+ N L+ MY+KC +A
Sbjct: 345 A---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEA 401
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--------LNLKPNSVTLVSI 505
VF ++ +++ISWT+II EA F++M+ +KP+++ V+I
Sbjct: 402 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 461
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERD 563
L+ACA + AL GK + A G++ D + A++++Y +CG ++ F+ + D
Sbjct: 462 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPD 521
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKM 590
V WN ++ YA+ GQ A + F +M
Sbjct: 522 VQLWNAMIAVYAQFGQSHEALKLFWRM 548
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 234/454 (51%), Gaps = 16/454 (3%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
++G ++ L+ L+ M++ + D + + C +G+ +H +V + + +
Sbjct: 122 ISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPK 181
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA L+M+ K G L HA VF KM R++ SW+++ G +A G EAL ++ M +
Sbjct: 182 VSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL 241
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G+K +L C ++ G+ +H + G+E+++ V NA++TMY +CG +
Sbjct: 242 -GIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEE 300
Query: 251 ARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD M + RD +SWN M+S Y N + L+ M+ + D +T S++SA
Sbjct: 301 ARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSAC 357
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
D LGR +H ++ +V V N L+ MY G+ E VF +ME + ++SWT
Sbjct: 358 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 417
Query: 369 TMISCYEGSVLPDKAVETYQMM---EAEGS----MPDEITIASVLSACACLGNLDLGIKL 421
T+IS Y L +A +Q M E GS PD + ++L+ACA + L+ G +
Sbjct: 418 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 477
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
+ A GL S + ++++Y KC I++ +F + + +V W ++I +
Sbjct: 478 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQ 537
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIG 513
S EAL +F+R M ++P+S + VSIL AC+ G
Sbjct: 538 SHEALKLFWRMEMEGVRPDSFSFVSILLACSHTG 571
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 20/444 (4%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
L+G++ +AL++ M L I + A+V ++ C +G +HS ++ + +
Sbjct: 224 LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELL 283
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ NA ++M+ + G + A VF M + RD+ SWN+++ Y +A+ LYQRM
Sbjct: 284 VANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM-- 341
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++ D T+ +L C D+ G+ +H ++ E +V V NAL++MY KCG
Sbjct: 342 --QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHT 399
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-------LVDPDFMTLS 302
AR VFD M +R ISW +IS Y + LF M E+ V PD +
Sbjct: 400 EARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFV 459
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++++A V + G+ V G S D +V ++ +Y G EEG ++F + S+
Sbjct: 460 TILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSR 519
Query: 363 -DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
DV W MI+ Y +A++ + ME EG PD + S+L AC+ G D G K
Sbjct: 520 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG-KS 578
Query: 422 HQLAMRT---GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ +M T + I + D+ + + +A E ++P K + ++WTS++ R
Sbjct: 579 YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACR- 637
Query: 478 NNRSFEALIFFRKMMLNLKPNSVT 501
N+R + +L L+P T
Sbjct: 638 NHRDLKRAKEVANKLLRLEPRCAT 661
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCK 448
+E + + T A +L CA L G K+H LA++ L+ +I+ N ++ MY+ C
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
A F + +N+ SWT ++ ++ +S E L +M + ++P++VT ++ L
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVS 565
+C +L G IH + + D + NALL+MY +CG + A F E R+V
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 213
Query: 566 AWNILLTGYAERGQGALAEEFFRKMI 591
+W+I+ +A G A FR M+
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFML 239
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 243/470 (51%), Gaps = 11/470 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+S++ FG L HA +F ++ S+ ++I + +S Y G
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D+ F +L+T + D+ ++H ++++ AD V+ +L+ Y KCG L AR
Sbjct: 132 FNDLVVFSILLKTASQLRDIVLTTKLHCNILK-SNAADSFVLTSLVDAYSKCGKLRDARK 190
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD +P R +SW +MI Y +N +GLMLF MRE +D + T+ S+++A +G
Sbjct: 191 VFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGC 250
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME------SKDVVSW 367
G+ VHGYVIK G + + L+ MY+ G+ + VF D+V W
Sbjct: 251 LHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFW 310
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI Y P A+E + + +P+ +T+AS+LSACA L N+ +G LH L ++
Sbjct: 311 TAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVK 370
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL + N+L+DMY+KC I A VF DK+V+SW S+I G + ++EAL
Sbjct: 371 YGLDD-TSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDL 429
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYV 545
F +M M + P++VT+V +LSACA +GA G +H AL+ G V+ ++ ALL+ Y
Sbjct: 430 FNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYA 489
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+CG A F+ E++ W ++ G +G G + FR M+ +
Sbjct: 490 KCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEE 539
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 244/505 (48%), Gaps = 41/505 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNA--------FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
L +V T H ++ NA + + K G L A VF ++ DR + SW +I
Sbjct: 148 LRDIVLTTKLHCNILKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMI 207
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
Y + +E L L+ RM G + +V+T ++ C + L +GK VH +VI+ G
Sbjct: 208 VAYVQNECAEEGLMLFNRM-REGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGI 266
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKR------DRISWNAMISGYFENGEYMKG 282
E + + +L+ MYVKCGD+ AR VFD D + W AMI GY + G
Sbjct: 267 EINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAA 326
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L LF + + P+ +TL+S++SA + + +G+ +H V+K G DD S+ N L+ M
Sbjct: 327 LELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL-DDTSLRNSLVDM 385
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G + VF+ KDVVSW ++IS Y S +A++ + M E +PD +T+
Sbjct: 386 YAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTV 445
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIP 461
VLSACA +G +G+ LH A++ GL+S I + L++ Y+KC A VF +
Sbjct: 446 VGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMG 505
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
+KN ++W ++I G + +L FR M+ L PN V ++L+AC+ G + G
Sbjct: 506 EKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLM 565
Query: 521 IHAHALRIGVAFD------GFLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAW 567
I FD F+P+ ++D+ R G ++ A + + + V +
Sbjct: 566 I----------FDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVF 615
Query: 568 NILLTGYAERGQGALAEEFFRKMID 592
L G E R+M++
Sbjct: 616 GAFLHGCGLHSNFDFGEVAIRRMLE 640
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 20/448 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E+ L + M+E + + + +LV C +G ++H V K ++ L
Sbjct: 213 NECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYL 272
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMC------DRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ L+M+VK GD+G A VF + DL W +I GY + G+ AL L+
Sbjct: 273 ATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTD 332
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
W + P+ T +L C + ++ GK +HV V+++G + D + N+L+ MY KCG
Sbjct: 333 KKWYR-ILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCG 390
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A VF +D +SWN++ISGY ++G + L LF MR PD +T+ V+S
Sbjct: 391 LIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLS 450
Query: 307 ASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A VG ++G +HG+ +K G S + V L+ Y G+ VF M K+ V
Sbjct: 451 ACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAV 510
Query: 366 SWTTMIS-C-YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+W MI C +G + A+ ++ M E +P+E+ ++L+AC+ G ++ G+ +
Sbjct: 511 TWAAMIGGCGMQGDGVGSLAL--FRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFD 568
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL---GLRLNN 479
+ + + ++D+ ++ + +AL+ ++P + + L GL N
Sbjct: 569 FMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNF 628
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILS 507
E I + ML L P+ ++S
Sbjct: 629 DFGEVAI---RRMLELHPDQACYYVLIS 653
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 235/459 (51%), Gaps = 15/459 (3%)
Query: 146 LGHAWYVFGKMCDRDL----FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
+G Y F + DL +N LI YA + A +Y R+ G V PD+YTFP
Sbjct: 51 IGFVDYAFDFLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFV-PDMYTFP 109
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VL+ C ++ G++VH ++ G+ D+ V N+L+ Y CG A VFD M R
Sbjct: 110 VVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVR 169
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
D +SW +ISGY G + + + LF+ M V P+ T SV+ A +G +G+ VH
Sbjct: 170 DVVSWTGLISGYVRTGLFDEAINLFLKMDVV---PNVATFVSVLVACGRMGYLSMGKGVH 226
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G V K F + V N L+ MY+ E K+F + +D+VSWT++IS P
Sbjct: 227 GLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPK 286
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
++E + M+ G PD I + SVLSACA LG LD G + + R G+ I I L+
Sbjct: 287 DSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALV 346
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY+KC CI+ AL +F+ IP++N+ +W +++ GL ++ EAL F M+ ++PN V
Sbjct: 347 DMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEV 406
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFN 558
T ++IL+AC G + G+ + F L + ++D+ R G + A+ +F
Sbjct: 407 TFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAY-KFI 465
Query: 559 SN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
N DV W LL+ G L++E +++ K
Sbjct: 466 RNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELK 504
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 189/381 (49%), Gaps = 7/381 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G EG +H V K + + N+ L + G G A VF +M RD
Sbjct: 111 VLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRD 170
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW LI GY + G FDEA++L+ +M V P+V TF VL CG + L GK VH
Sbjct: 171 VVSWTGLISGYVRTGLFDEAINLFLKM----DVVPNVATFVSVLVACGRMGYLSMGKGVH 226
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V + + + V NAL+ MYVKC L AR +FD +P RD +SW ++ISG + +
Sbjct: 227 GLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPK 286
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L LF M+ V+PD + L+SV+SA +G GR V Y+ + G D+ + L+
Sbjct: 287 DSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALV 346
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E +F+ + ++++ +W ++ +A++ +++M G P+E+
Sbjct: 347 DMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEV 406
Query: 401 TIASVLSACACLGNLDLGIK--LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T ++L+AC G + G ++ + +ID+ + +D+A +
Sbjct: 407 TFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIR 466
Query: 459 QIP-DKNVISWTSIILGLRLN 478
+P +V+ W +++ + N
Sbjct: 467 NMPLPPDVLIWGALLSACKAN 487
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+ +L+ MQ + D L +++ C D G ++ + + + +G A
Sbjct: 286 KDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTAL 345
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A ++F + +R++F+WN L+GG A G EAL ++ M G++P+
Sbjct: 346 VDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIG-AGIRPN 404
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRARLV 254
TF +L C + G+ +I F + ++ +I + + G L A
Sbjct: 405 EVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKF 464
Query: 255 FDGMP-KRDRISWNAMISGYFENG 277
MP D + W A++S NG
Sbjct: 465 IRNMPLPPDVLIWGALLSACKANG 488
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 256/498 (51%), Gaps = 22/498 (4%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
NL L K G+D L+L N ++++V+ GD A +F +M D
Sbjct: 19 ANLFHLNVLKHGFDSDLFL---------------CNTLINVYVRIGDCVSARKLFDEMPD 63
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GK 217
R+ +W LI GY + G ++A + + M + G + P+ + F +R C +R G+
Sbjct: 64 RNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFL-PNRFAFGSAIRACQESMLWRRKGR 122
Query: 218 EVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+VH + IR G +A V V N LI MY KCGD+ AR VF M +D +SWN+MI+G +N
Sbjct: 123 QVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQN 182
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + + MR+ + P L S +S+ +G LG++ HG IK+G DVSV
Sbjct: 183 KCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVS 242
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS-VLPDKAVETYQMMEAEGS 395
N L+ +Y E +KVFS M +D VSW T+I S +A+E + M G
Sbjct: 243 NTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGW 302
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+ +T ++L+ + L L ++H L ++ + I N L+ Y K ++ E
Sbjct: 303 SPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEE 362
Query: 456 VFHQIPD-KNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIG 513
+F ++ + ++ +SW S+I G N +A+ + + M + + T ++LSACA +
Sbjct: 363 IFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVA 422
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLT 572
L CG E+HA A+R + D + +AL+DMY +CGR+ A FN R++ +WN +++
Sbjct: 423 TLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMIS 482
Query: 573 GYAERGQGALAEEFFRKM 590
GYA G G A F +M
Sbjct: 483 GYARHGHGDNALRLFTRM 500
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 265/527 (50%), Gaps = 24/527 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE----WKRGYDEGLYLHSVVSKT-MSH 127
NG E A L M + A + +R C+ W+R +G +H +T ++
Sbjct: 79 NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRR---KGRQVHGYAIRTGLND 135
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V +GN ++M+ K GD+ HA VFG M D+D SWN +I G + F++A+ Y M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G + P + L +C + + G++ H I+ G + DV V N L+ +Y +
Sbjct: 196 RKTG-LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSR 254
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYM-KGLMLFIMMREVLVDPDFMTLSSVIS 306
L + VF M +RD++SWN +I ++G + + + +F+ M P+ +T ++++
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 314
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVV 365
+ KL ++H ++K DD ++ N L+ Y G E E++FSRM E +D V
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEV 374
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +MIS Y + L KA++ +M G D T A+VLSACA + L+ G+++H A
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+R L S ++I + L+DMYSKC ID A F+ +P +N+ SW S+I G + AL
Sbjct: 435 IRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNAL 494
Query: 486 IFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NA 539
F +M L+ + P+ +T V +LSAC+ IG + G E + G +P +
Sbjct: 495 RLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVY----GLVPRVEHYSC 550
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
++D+ R G + N N + ++ W +L G RG G E
Sbjct: 551 MVDLLGRAGELDKIENFINKMPIKPNILIWRTVL-GACCRGNGRKTE 596
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 6/449 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L N E A+K +SM++ + AL++ + C G H K
Sbjct: 173 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIK 232
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-FDEALS 182
+ V + N L+++ + L VF M +RD SWN +IG A +G EA+
Sbjct: 233 LGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIE 292
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G P+ TF +L T + K ++H ++++ + D + NAL+ Y
Sbjct: 293 VFLEMM-RAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACY 351
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
K G++ +F M +RD +SWN+MISGY N K + L +M + D T
Sbjct: 352 GKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTF 411
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++V+SA V + G EVH I+ DV + + L+ MY G + + F+ M
Sbjct: 412 ATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK- 420
+++ SW +MIS Y D A+ + M+ G +PD IT VLSAC+ +G +D G +
Sbjct: 472 RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEY 531
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG-LRLN 478
+ GL+ + + ++D+ + +DK +++P K N++ W +++ R N
Sbjct: 532 FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGN 591
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILS 507
R E +M+ N+ P + +LS
Sbjct: 592 GRKTELGRRAAEMLFNMDPQNAVNYVLLS 620
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 34/286 (11%)
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+K GF D+ +CN LI +Y+ G+ K+F M ++ V+W +IS Y + +P
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGL-ISYIIIAN 438
+ A + M EG +P+ S + AC + G ++H A+RTGL + + + N
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
LI+MY+KC ID A VF + DK+ +SW S+I GL N +A+ + M L P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++ L+S LS+CA +G ++ G++ H +++G LDM
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLG-----------LDM-------------- 237
Query: 558 NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID-SKGNWRKLMG 602
DVS N LL YAE + A ++ F M++ + +W ++G
Sbjct: 238 -----DVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIG 278
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 246/481 (51%), Gaps = 26/481 (5%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKP 195
LS + G L A +F + WN +I G F DEAL Y M VK
Sbjct: 35 LSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 94
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG--------- 246
D YT+ VL+ C +L GK VH H +R V N+L+ MY C
Sbjct: 95 DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 154
Query: 247 ------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
DLVR VFD M KR ++WN +I+ Y Y + + F MM ++ + P ++
Sbjct: 155 SGYSRCDLVRK--VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVS 212
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+V A +GD K VHG ++K+G + +D+ V + I MY G E +KVF
Sbjct: 213 FVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN 272
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDL 417
++ W TMIS + + + ++ +Q +E+E + DE+T+ S +SA + L +L
Sbjct: 273 CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFEL 332
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
+LH ++ ++ + + N LI MYS+C ID + ++F +P+K+V+SW ++I
Sbjct: 333 AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 392
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N + EAL+ F +M +L +SVT+ ++LSA + + GK+ H + LR G+ F+G +
Sbjct: 393 NGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-M 451
Query: 537 PNALLDMYVRCGRMKPAWNQFN---SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ L+DMY + G ++ A N F S+ERD + WN +++GY + G A R+M+D
Sbjct: 452 DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 511
Query: 594 K 594
K
Sbjct: 512 K 512
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 236/449 (52%), Gaps = 9/449 (2%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF M R + +WN LI Y + + EA+ + M +G +KP +F V +
Sbjct: 166 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG-IKPSPVSFVNVFPAFSSLG 224
Query: 212 DLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
D K VH +++ G Y D+ VV++ I MY + G L A+ VFD +R+ WN M
Sbjct: 225 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 284
Query: 270 ISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
IS + +N ++G+ LF E D +TL S ISA+ + +L ++H +VIK
Sbjct: 285 ISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNV 344
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
V V N LI MY + + K+F M KDVVSW TMIS + + L D+A+ +
Sbjct: 345 AVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFY 404
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ + M D +T+ ++LSA + L N D+G + H +R G I + + + LIDMY+K
Sbjct: 405 EMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSG 463
Query: 449 CIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
I+ A VF + +++ +W S++ G N +A + R+M+ + PN VTL SI
Sbjct: 464 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 523
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDV 564
L AC G + GK++H ++R + + F+ AL+DMY + G + A N F+ +NE+ +
Sbjct: 524 LPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSI 583
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDS 593
++ ++ GY + G G A F +M S
Sbjct: 584 VTYSTMILGYGQHGMGESALFMFHRMQKS 612
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 223/422 (52%), Gaps = 9/422 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G L A VF +R+ WN +I + + F E + L+ + D
Sbjct: 256 MYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEV 315
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T + + + +++H VI+ V V+NALI MY +C + + +FD M
Sbjct: 316 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 375
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P++D +SWN MIS + +NG + LMLF M++ + D +T+++++SA+ + + +G+
Sbjct: 376 PEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGK 435
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEG 376
+ HGY+++ G + + + LI MY G E + VF + S +D +W +M+S Y
Sbjct: 436 QTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQ 494
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ L D+A + M + MP+ +T+AS+L AC G +D G +LH ++R L + +
Sbjct: 495 NGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFV 554
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
A LIDMYSK I A VF + +K++++++++ILG + AL F +M + +
Sbjct: 555 ATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGI 614
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAH---ALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+P++VTLV++LSAC+ G + G +I I + + F + DM R GR+
Sbjct: 615 QPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFC--CVADMLGRAGRVDK 672
Query: 553 AW 554
A+
Sbjct: 673 AY 674
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 224/433 (51%), Gaps = 16/433 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N SLE + +++ + +DE L++ + + ++ LH+ V K ++ V +
Sbjct: 292 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 351
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M+ + + ++ +F M ++D+ SWN +I + + G DEAL L+ M
Sbjct: 352 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM-KKQD 410
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D T +L + + GK+ H +++R G + + + + LI MY K G + A+
Sbjct: 411 LMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQ 469
Query: 253 LVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF+ +RD+ +WN+M+SGY +NG + ++ M + V P+ +TL+S++ A
Sbjct: 470 NVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNP 529
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G G+++HG+ I+ +V V LI MY G+ E VFS+ K +V+++TM
Sbjct: 530 SGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTM 589
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y + + A+ + M+ G PD +T+ +VLSAC+ G +D G+++ + +MRT
Sbjct: 590 ILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE-SMRT-- 646
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDK-NVIS-WTSIILGLRLNNRSFE 483
Y I +T + DM + +DKA E + +K NV+ W S++ R+ ++ FE
Sbjct: 647 -VYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRI-HKQFE 704
Query: 484 ALIFFRKMMLNLK 496
K +L ++
Sbjct: 705 LGKLVAKKLLEME 717
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG ++QA L M + + + L +++ C D G LH +
Sbjct: 486 NSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIR 545
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + A + M+ K G + HA VF K ++ + +++ +I GY + G + AL +
Sbjct: 546 NDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFM 605
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCG 208
+ RM G++PD T VL C
Sbjct: 606 FHRM-QKSGIQPDAVTLVAVLSACS 629
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 270/532 (50%), Gaps = 65/532 (12%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
++H +V N L+ +VK G L A +FG+M RD+ SWN L+ GY ++ + +L +
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G P+ +TF +++CG + + ++ V +FG + D DV AL+ M+V+
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 245 CGDL-VRARL------------------------------VFDGMPKRDRISWNAMISGY 273
CG + + +RL +FD MP+RD +SWN M+S
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++G + L + + M+ V D T +S ++A + + G+++H VI+ D
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+++Y G +E + VF+ + ++ V+WT +I+ + ++VE + M AE
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D+ +A+++S C +L LG +LH L +++G I ++++N+LI MY+KC + A
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 454 LEVFHQIPDKNVISWTSII------------------------------LGLRLNNRSFE 483
+F + +K+++SWTS+I LG + + + E
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEE 485
Query: 484 ALIFFRKMML---NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ +ML +++P+ VT V++ CA +GA G +I +++G+ D + NA+
Sbjct: 486 DGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAV 545
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ MY +CGR+ A F+ N +D+ +WN ++TGY++ G G A E F ++
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 237/489 (48%), Gaps = 41/489 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L +VK + HA +F M +RD+ SWN+++ +++G EAL + M GV
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKGV 266
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D T+ L C + L+ GK++H VIR D V +AL+ +Y KCG A+
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + R+ ++W +I+G+ ++G + + + LF MR L+ D L+++IS D
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR++H +K G V V N LI MY N + E +F M KD+VSWT+MI+
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446
Query: 374 YE---------------------------GSVLPDKAVET----YQMMEAEGSM-PDEIT 401
+ G+ + A E Y +M +E + PD +T
Sbjct: 447 HSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVT 506
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ CA LG LG ++ ++ GLI +AN +I MYSKC I +A +VF +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK- 519
K+++SW ++I G + +A+ F ++ KP+ ++ V++LS C+ G + GK
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS 626
Query: 520 --EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYA 575
++ I + F + ++D+ R G + A + + +A W LL+
Sbjct: 627 YFDMMKRVHNISPGLEHF--SCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACK 684
Query: 576 ERGQGALAE 584
G LAE
Sbjct: 685 IHGNNELAE 693
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 47/437 (10%)
Query: 206 TCGGVPDLKR---GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+CG +PD +R H +VI N ++ YVK G L A +F MP RD
Sbjct: 51 SCGALPDARRLLLTDIAHPNVITH---------NVMLNGYVKLGRLSDAVELFGRMPARD 101
Query: 263 RISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
SWN ++SGYF++ +Y+ L F+ M R P+ T + + + +G+ L ++
Sbjct: 102 VASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLL 161
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR----------------------- 358
G V K G DD V L+ M++ G + ++F R
Sbjct: 162 GMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVD 221
Query: 359 --------MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
M +DVVSW M+S S +A++ M+++G D T S L+ACA
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L +L G +LH +R +A+ L+++Y+KC C +A VF+ + D+N ++WT
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 471 IILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G + E++ F +M L + L +++S C L G+++H+ L+ G
Sbjct: 342 LIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ N+L+ MY +C ++ A + F NE+D+ +W ++T +++ G A A EFF
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFD 461
Query: 589 KM-IDSKGNWRKLMGLF 604
M + W ++G +
Sbjct: 462 GMSTKNVITWNAMLGAY 478
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 210/449 (46%), Gaps = 35/449 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ L +G + +AL + MQ + +D + + C G LH+ V +
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + +A + ++ K G A VF + DR+ +W VLI G+ + G F E++ L
Sbjct: 299 NLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVEL 358
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + D + ++ C DL G+++H ++ G V V N+LI+MY
Sbjct: 359 FNQM-RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 244 KC-------------------------------GDLVRARLVFDGMPKRDRISWNAMISG 272
KC G++ +AR FDGM ++ I+WNAM+
Sbjct: 418 KCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGA 477
Query: 273 YFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y ++G GL ++ +M+ E V PD++T ++ +G KLG ++ G +K+G
Sbjct: 478 YIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIL 537
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D SV N +I MY G E KVF + KD+VSW MI+ Y + +A+E + +
Sbjct: 538 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCI 450
G+ PD I+ +VLS C+ G + G + R IS + + ++D+ + +
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHL 657
Query: 451 DKALEVFHQIPDKNVIS-WTSIILGLRLN 478
+A ++ ++P K W +++ +++
Sbjct: 658 TEAKDLIDEMPMKPTAEVWGALLSACKIH 686
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ 579
H + +G+A FL N LL Y+ CG + A ++ +V N++L GY + G+
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 580 GALAEEFFRKM-IDSKGNWRKLM-GLFRKCQ 608
+ A E F +M +W LM G F+ Q
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQ 117
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 241/468 (51%), Gaps = 11/468 (2%)
Query: 134 NAFLSMFVK--FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N LS + + G L A +F +M RD +WN +I GY +G A LY+ M G
Sbjct: 38 NNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFG 97
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ PD YTF +L+ L G++VH +++ GYE V +AL+ MY KC + A
Sbjct: 98 -LMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDA 156
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+VF +P+R+ +SWNA+I+G+ G++ L M E V D T S +++ +
Sbjct: 157 FMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEK 216
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTTM 370
KL ++H +IK G D +VCN I Y G+ E+ E+VF + S+D+V+W +M
Sbjct: 217 KFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSM 276
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
++ + + A + + M+ G PD T +++SAC+ + D G LH L ++ GL
Sbjct: 277 LAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACS---HKDNGKSLHGLVIKRGL 333
Query: 431 ISYIIIANTLIDMY--SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ I N +I MY S ++ AL VFH + K+ +SW SI+ G S AL F
Sbjct: 334 EQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLF 393
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + + ++L +C+ + L G++IH ++ G + F+ ++L+ MY +C
Sbjct: 394 VHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKC 453
Query: 548 GRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMIDSK 594
G ++ A F +D S WN ++ YA+ GQG +A F +M D K
Sbjct: 454 GMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKK 501
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 259/536 (48%), Gaps = 11/536 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ +GSL A + SM+ + D ++++ D G +HS++ K
Sbjct: 71 NTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVK 130
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V G+A L M+ K + A+ VF + R+ SWN LI G+ G D A L
Sbjct: 131 MGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWL 190
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
R GV+ D TF +L K ++H +I+ G + D V NA IT Y
Sbjct: 191 L-RCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYS 249
Query: 244 KCGDLVRARLVFDG-MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+CG L A VFDG + RD ++WN+M++ + + LF+ M++ +PD T +
Sbjct: 250 QCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYT 309
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL--SFGNREEGEKVFSRME 360
++ISA + G+ +HG VIK G V +CN +I MYL S + E+ VF ME
Sbjct: 310 TIISA---CSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSME 366
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
SKD VSW ++++ + + + A++ + M D ++VL +C+ L L LG +
Sbjct: 367 SKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQ 426
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H L +++G S +A++LI MYSKC I+ A + F + + I+W SI+ + +
Sbjct: 427 IHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQ 486
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPN 538
AL +FF+ +K + +T V+ L+AC+ IG + G+ + + A G++
Sbjct: 487 GDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYA 546
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+D++ R G + A S D A W LL G LA + +++
Sbjct: 547 CAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLE 602
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 208/449 (46%), Gaps = 10/449 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G + A L M+E + +D+ L+ L + K+ Y + LH + K
Sbjct: 172 NALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIK 231
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVF-GKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ NA ++ + + G L A VF G + RDL +WN ++ + + A
Sbjct: 232 HGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFK 291
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M G +PD+YT+ ++ C + GK +H VI+ G E V + NA+I MY
Sbjct: 292 LFLDMQQFG-FEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMY 347
Query: 243 VKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
++ + A VF M +DR+SWN++++G+ + G L LF+ MR +VD D
Sbjct: 348 LESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYA 407
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+V+ + + +LG+++H +K GF + V + LI MY G E+ K F +
Sbjct: 408 FSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTA 467
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-I 419
++W +++ Y D A+ + M + D IT + L+AC+ +G ++ G
Sbjct: 468 KDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRY 527
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L +A G+ + +D++ + +D+A + +P D + + W +++ R
Sbjct: 528 LLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRAC 587
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILS 507
E +L L+P ILS
Sbjct: 588 G-DIELAAQVASHLLELEPEEHCTYVILS 615
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 180/379 (47%), Gaps = 10/379 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKC--GDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
H I+ G AD+ N +++ Y +C G L A +FD M RD ++WN MISGY +
Sbjct: 21 THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNS 80
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G L+ M+ + PD T S++ +G++VH ++KMG+ + V
Sbjct: 81 GSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAG 140
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ L+ MY + VF + ++ VSW +I+ + D A + ME EG
Sbjct: 141 SALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVR 200
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D+ T + +L+ L ++LH ++ G+ + N I YS+C ++ A V
Sbjct: 201 LDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERV 260
Query: 457 FH-QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGA 514
F + +++++W S++ ++R A F M +P+ T +I+SAC+
Sbjct: 261 FDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN 320
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG--RMKPAWNQFNSNE-RDVSAWNILL 571
GK +H ++ G+ + NA++ MY+ M+ A N F+S E +D +WN +L
Sbjct: 321 ---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSIL 377
Query: 572 TGYAERGQGALAEEFFRKM 590
TG+++ G A + F M
Sbjct: 378 TGFSQTGHSENALKLFVHM 396
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 258/521 (49%), Gaps = 4/521 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +QAL M + I + L ++++ C +H V K +G
Sbjct: 130 GDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVG 189
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + + G+L A V + +R SWN L+ GYA+ G + + + +++ G
Sbjct: 190 SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLV-ASGD 248
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ YT P VL+ C + K G+ VH VI+ G E D + + L+ MY +C A
Sbjct: 249 EISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYE 308
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + + D + +AMIS + + + L LF+ M + V P+ + + GD
Sbjct: 309 VFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGD 368
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
L R VH Y++K GF+ V + ++ MY+ G ++ F + D SW T++S
Sbjct: 369 ANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSA 428
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ ++ + ++ M EG ++ T SVL C L NL G ++H +++GL +
Sbjct: 429 FYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQND 488
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++ L+DMY++ C A VF Q+ +++ SWT I+ G + + + +FR M+
Sbjct: 489 TDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLR 548
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N++P+ TL LS C+ + +L G ++H+ A++ G + AL+DMYV+CG +
Sbjct: 549 ENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWN-SSVVSGALVDMYVKCGNIAD 607
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F+ +E RD AWN ++ GY++ G G A + F++M+D
Sbjct: 608 AEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVD 648
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 243/492 (49%), Gaps = 9/492 (1%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C +R G LH+ + ++ H L ++ L+M+ K G L A VF M RD+ +W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
+I + AG D+AL ++ RM G+ P+ +T VL+ C G K +VH V+
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQ-EGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVV 178
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ D V ++L+ Y CG+L A V G+P+R +SWNA+++GY +G+Y +
Sbjct: 179 KLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR--- 235
Query: 285 LFIMMREVLVDPDFM---TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ I++ +++ D + TL +V+ +G K G+ VH VIK G D + + L++
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY + EE +VF R++ DVV + MISC++ + +A++ + M G P+
Sbjct: 296 MYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ + G+ +L +H +++G + + +++MY K + A F I
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
+ + SW +I+ + + L F++M N T VS+L C + L G +
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQ 475
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+HA L+ G+ D + L+DMY + G A F ERD +W ++++GYA+ +
Sbjct: 476 VHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE 535
Query: 580 GALAEEFFRKMI 591
E+FR M+
Sbjct: 536 AEKVVEYFRSML 547
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 204/390 (52%), Gaps = 2/390 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L+ C L+RG+E+H ++R D ++++L+ MY KCG LV AR VFDGMP RD
Sbjct: 56 ALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRD 115
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W AMIS + G+ + L +F M + + P+ TL+SV+ A K +VHG
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
V+K+ DD V + L++ Y S G + E V + + VSW +++ Y +
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+ + + A G + T+ +VL C LG G +H ++ GL + ++ + L++
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVE 295
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MYS+C ++A EVF +I + +V+ +++I ++ ++EAL F KM + +KPN
Sbjct: 296 MYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SN 560
V I +R G + +HA+ ++ G A + +A+L+MYV+ G ++ A F+ +
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
E D +WN +L+ + F++M
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQM 445
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 226/466 (48%), Gaps = 14/466 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H+ V K L + + M+ + A+ VF ++ + D+ + +I + +
Sbjct: 271 GQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDR 330
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
EAL L+ +M +G VKP+ Y F + D + VH ++++ G+
Sbjct: 331 HDMAWEALDLFVKMSGMG-VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKG 389
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +A++ MYVK G + A + FD + + D SWN ++S ++ +GL +F M
Sbjct: 390 VGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEG 449
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ T SV+ + + + G +VH ++K G +D V L+ MY G
Sbjct: 450 FSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSAC 509
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF +++ +D SWT ++S Y + +K VE ++ M E P + T+A LS C+ +
Sbjct: 510 LVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMA 569
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L G++LH A+++G S ++ + L+DMY KC I A +FH+ ++ ++W +II
Sbjct: 570 SLGSGLQLHSWAIKSGWNSSVV-SGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIIC 628
Query: 474 GLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G + ++AL F++M+ K P+ +T V +LSAC+ G L G++ + +
Sbjct: 629 GYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKY----FKSLSSI 684
Query: 533 DGFLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
G P ++D+ + GR+ A + N D S W +L
Sbjct: 685 YGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTIL 730
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 200/395 (50%), Gaps = 9/395 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + K+ + +G+A L+M+VK G + A F + + D FSWN ++ +
Sbjct: 375 VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSN 434
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
++ L ++++M G + YT+ VLR C + +L+ G +VH +++ G + D DV
Sbjct: 435 CEQGLRIFKQMA-CEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSR 493
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ MY + G A LVF+ + +RD SW ++SGY + E K + F M + P
Sbjct: 494 MLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRP 553
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
TL+ +S + G ++H + IK G++ V V L+ MY+ GN + E +F
Sbjct: 554 SDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLF 612
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
E++D V+W T+I Y KA++ ++ M EG PD IT VLSAC+ G L+
Sbjct: 613 HESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLN 672
Query: 417 LGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
G K L+ G+ + ++D+ SK + +A + +Q+ PD ++ W +I+
Sbjct: 673 EGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSI--WRTIL 730
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
R+ +R+ E + + L+P+ + +LS
Sbjct: 731 GACRI-HRNIEIAERAAERLFELEPHDASSSILLS 764
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 4/310 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ + EQ L+ M ++ V+++R C G +H+ + K
Sbjct: 423 NTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILK 482
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M+ + G A VF ++ +RD FSW V++ GYAK ++ +
Sbjct: 483 SGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEY 542
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M ++P T L C + L G ++H I+ G+ + V V AL+ MYV
Sbjct: 543 FRSML-RENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYV 600
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ A ++F RD+++WN +I GY ++G K L F M + PD +T
Sbjct: 601 KCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVG 660
Query: 304 VISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-S 361
V+SA G GR+ + + G + + ++ + G E E + ++M +
Sbjct: 661 VLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLA 720
Query: 362 KDVVSWTTMI 371
D W T++
Sbjct: 721 PDSSIWRTIL 730
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
A+ L CA L G +LH +R+ L + ++L++MY KC + A VF +P
Sbjct: 54 AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+++++WT++I S +AL F +M + PN TL S+L AC+ ++
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGYAERG 578
H +++ D ++ ++L++ Y CG + A ER +WN LL GYA G
Sbjct: 174 HGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 252/451 (55%), Gaps = 7/451 (1%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ +A +F ++ + D ++N++I G+ EA+ L++ M V+PD +TFPC+L+
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHE-NSVQPDEFTFPCILK 132
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C + L G+++H +++ G+ + V N LI MY CG++ AR VFD M +R+ +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN+M +GY ++G + + + LF M E+ + D +TL SV++A + D +LG ++ YV
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
+ G + ++ L+ MY G + ++F +M+ +DVV+W+ MIS Y + +A++
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M+ P+EIT+ S+LS+CA LG L+ G +H + + + + L+D Y+
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
KC ++ ++EVF ++P KNV+SWT +I GL N + +AL +F M+ N++PN VT +
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 505 ILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--- 560
+LSAC+ G + G+++ R G+ ++D+ R G ++ A+ QF N
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAF-QFIKNMPI 491
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + W LL + EE +++I
Sbjct: 492 QPNAVIWRTLLASCKVHKNVEIGEESLKQLI 522
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 209/425 (49%), Gaps = 14/425 (3%)
Query: 194 KPDVYTFP-----CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI--TMYVKCG 246
K + FP +L C + DL E+H H+I+ V L+ +
Sbjct: 16 KTSISLFPENPKTLILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPT 72
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A +F + + D ++N MI G+ + ++LF M E V PD T ++
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ G ++H ++K GF V N LI MY + G E +VF M ++V +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W +M + Y S ++ V+ + M DE+T+ SVL+AC L +L+LG +++
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
GL + +L+DMY+KC +D A +F Q+ ++V++W+++I G +R EAL
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F +M N+ PN +T+VSILS+CA +GAL GK +H + + L AL+D Y
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYA 372
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMG 602
+CG ++ + F ++V +W +L+ G A GQG A E+F M++ + N +G
Sbjct: 373 KCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432
Query: 603 LFRKC 607
+ C
Sbjct: 433 VLSAC 437
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 218/411 (53%), Gaps = 7/411 (1%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM--SHLS 129
L S +A+ M E ++ DE ++++C + EG +H+++ K SH
Sbjct: 101 LKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGF 160
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V+ N + M+ G++ A VF +M +R++ +WN + GY K+G ++E + L+ M
Sbjct: 161 VK--NTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE 218
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ ++ D T VL CG + DL+ G+ ++ +V G + + ++ +L+ MY KCG +
Sbjct: 219 L-DIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVD 277
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR +FD M +RD ++W+AMISGY + + L LF M++ +DP+ +T+ S++S+
Sbjct: 278 TARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCA 337
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
++G + G+ VH ++ K V++ L+ Y G+ E +VF +M K+V+SWT
Sbjct: 338 VLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTV 397
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRT 428
+I + KA+E + +M + P+++T VLSAC+ G +D G L ++
Sbjct: 398 LIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDF 457
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
G+ I ++D+ + I++A + +P N + W +++ +++
Sbjct: 458 GIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 184/396 (46%), Gaps = 41/396 (10%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ E+ +K M EL+I DE LV+++ C + G +++ V + + L
Sbjct: 203 SGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTL 262
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ + M+ K G + A +F +M RD+ +W+ +I GY++A EAL L+ M
Sbjct: 263 ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEM-QKAN 321
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T +L +C + L+ GK VH + + + V + AL+ Y KCG + +
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI 381
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MP ++ +SW +I G NG+ K L F +M E V+P+ +T V+SA G
Sbjct: 382 EVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR++ + S D + P I+ Y G V D++ +I
Sbjct: 442 LVDEGRDLF-----VSMSRDFGI-EPRIEHY--------GCMV-------DILGRAGLIE 480
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
E +Q ++ P+ + ++L++C N+++G + L QL +
Sbjct: 481 ------------EAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH 528
Query: 432 S--YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
S YI+++N +Y+ + AL+V ++ +K +
Sbjct: 529 SGDYILLSN----IYASVGRWEDALKVRGEMKEKGI 560
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 242/469 (51%), Gaps = 17/469 (3%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
L LG AF+S F K GDL A VF + R++ SW V+I YA+ GF A LY+R
Sbjct: 362 LDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKR 421
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +P+ TF V+ +C DL R +++H H++ G+E+DV + L+TMY KCG
Sbjct: 422 M----DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCG 477
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A +F+ + +R ++WN+M+S + NG Y + L L+ M PD +T +V+
Sbjct: 478 SVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLD 537
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD-VV 365
A + V E Y D++ N + Y G+ +E + F ++ K+ V
Sbjct: 538 ACQSVS------EARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAV 591
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W MIS +A+E + ME EG + +T + L AC+ L +L G +LH
Sbjct: 592 TWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARI 651
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ I ++N +I+MY KC +D+A++ F ++P+++VISW ++I + +AL
Sbjct: 652 LLEN-IHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQAL 710
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFLPNALLD 542
FF++M L P+ T + + AC + +L GK IH+ D + AL+
Sbjct: 711 EFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVT 770
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY RCG + A + F S+ R++ W+ L+ A+ G+ A + FR+M
Sbjct: 771 MYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREM 819
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 261/534 (48%), Gaps = 20/534 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N EL L + Q K +S+Q +L++ C ++ G +H +
Sbjct: 2 NPAATELSLQTHINQLKKSSESLQPAR-------YASLLQKCAEQKSAAAGKLVHQHILS 54
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ L N + M+ K G L A VF + ++FSW LI YAK G E L
Sbjct: 55 SGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGF 114
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G KPD + F VL C L GK +H V+ G E V V NA++ +Y
Sbjct: 115 FRKM-QLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYG 172
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLS 302
KCG + A+ VF+ +P+R+ +SWNA+I+ +NG + +F +M + V P+ T
Sbjct: 173 KCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFV 232
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SV+ A + D G+ H +I+ GF + V N L+ MY G+ + VF +M +
Sbjct: 233 SVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLR 292
Query: 363 DVV---SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
DV+ SWT +I+ + + +A + M+ EG +P+++T +VL AC L +
Sbjct: 293 DVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCE--- 349
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLN 478
K+ GL + + ++K + A +VF + +NV+SWT +I
Sbjct: 350 KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQ 409
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
A +++M + +PN+VT ++++ +C R L ++IHAH + G D L
Sbjct: 410 GFIRAAFDLYKRM--DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQV 467
Query: 539 ALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
L+ MY +CG + AW+ F N ER V AWN +L+ +A G + + + +M+
Sbjct: 468 CLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERML 521
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 256/525 (48%), Gaps = 22/525 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L + L + MQ D ++ C +EG +H V V +G
Sbjct: 106 GHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VG 164
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++++ K G + A VF ++ +R+L SWN LI A+ G +A+ ++Q M G V
Sbjct: 165 NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSV 224
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ TF V+ C + DL RGK H +IR G+++ + V N+L+ MY KCG + ARL
Sbjct: 225 RPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARL 284
Query: 254 VFDGMPKRDRI---SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SE 309
VF+ M RD + SW +I+ + NG ++ +LF M V P+ +T +V+ A +
Sbjct: 285 VFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTT 344
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWT 368
L EK + V +G D ++ + + G+ VF + S++VVSWT
Sbjct: 345 LAQCEK----IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWT 400
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI Y A + Y+ M+ E P+ +T +V+ +C +L ++H + +
Sbjct: 401 VMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVAS 457
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G S +++ L+ MY KC +D A +F + +++V++W S++ N +L +
Sbjct: 458 GFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLY 517
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M+L KP+ +T +++L AC + E +A + D NA + Y RC
Sbjct: 518 ERMLLEGTKPDKITYLAVLDACQSV------SEARRYAATFELELDIAARNAAVSAYARC 571
Query: 548 GRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKM 590
G +K A F++ + + WN +++G A+ G+ A E F KM
Sbjct: 572 GSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKM 616
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 269/526 (51%), Gaps = 22/526 (4%)
Query: 73 NGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG + A++ M + ++ ++ V++V C G H + +T +
Sbjct: 205 NGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDL---FSWNVLIGGYAKAGFFDEALSLYQRMF 188
+GN+ ++M+ K G + HA VF KM RD+ +SW V+I +A G EA L+ +M
Sbjct: 265 VGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMD 324
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ GV P+ TF VLR C L + +++ V G E D + A ++ + K GDL
Sbjct: 325 -LEGVLPNKVTFVTVLRAC---TTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDL 380
Query: 249 VRARLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
AR VF+ + R+ +SW MI Y + G +++ F + + + +P+ +T +V+ +
Sbjct: 381 AAARDVFENLGSSRNVVSWTVMIWAYAQQG-FIRAA--FDLYKRMDCEPNAVTFMAVMDS 437
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D ++H +++ GF DV + L+ MY G+ + +F ++ + VV+W
Sbjct: 438 CLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAW 497
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+M+S + + +++++ Y+ M EG+ PD+IT +VL AC + +L +
Sbjct: 498 NSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELELD 557
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN-VISWTSIILGLRLNNRSFEALI 486
I N + Y++C + +A F I KN ++W ++I GL + S +AL
Sbjct: 558 ------IAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALE 611
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F KM L ++ NSVT ++ L AC+ + L G+++HA L + + L NA+++MY
Sbjct: 612 CFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENI-HEANLSNAVINMYG 670
Query: 546 RCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A ++F ERDV +WN ++ YA+ G G A EFF++M
Sbjct: 671 KCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQM 716
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 236/474 (49%), Gaps = 18/474 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E ++ H V S S + +++ ++M+ K G + AW +F + +R + +WN ++ +A
Sbjct: 448 EQIHAHMVASGFESDVVLQV--CLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFA 505
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G ++ +L LY+RM + G KPD T+ VL C V + +R + F E D+
Sbjct: 506 SNGCYERSLKLYERML-LEGTKPDKITYLAVLDACQSVSEARR------YAATFELELDI 558
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
NA ++ Y +CG L A+ FD + K + ++WNAMISG ++GE + L F M
Sbjct: 559 AARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMEL 618
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V + +T + + A + D GR++H ++ + ++ N +I MY G+ +E
Sbjct: 619 EGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSLDE 677
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
F +M +DV+SW TMI+ Y +A+E ++ M+ EG PD T + AC
Sbjct: 678 AMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGS 737
Query: 412 LGNLDLGIKLHQLAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ +L LG +H + L +A L+ MY++C + A VF + +N+++W+
Sbjct: 738 VPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWS 797
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM-CGKEIHAHALR 527
++I + R EAL FR+M L KP+++T ++++AC+R G + G+ I R
Sbjct: 798 NLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGR 857
Query: 528 I-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERG 578
+ V+ ++++ R G+++ A R S W LL RG
Sbjct: 858 VYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRG 911
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 211/415 (50%), Gaps = 12/415 (2%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ +L+ C GK VH H++ G + + N LI MY KCG L A VF+ +P
Sbjct: 29 YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLP 88
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+ SW A+I+ Y + G + L F M+ PD S+V++A G G+
Sbjct: 89 CPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H V+ G V V N ++ +Y G E + VF R+ +++VSW +I+ +
Sbjct: 149 IHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207
Query: 380 PDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
A++ +Q+M+ +GS+ P++ T SV+ AC+ L +L G H+ +RTG SY+ + N
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVI---SWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+L++MY KC +D A VF ++ ++V+ SWT II N EA + F KM L
Sbjct: 268 SLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEG 327
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ PN VT V++L AC + C K I A +G+ D L A + + + G + A
Sbjct: 328 VLPNKVTFVTVLRACTTLA--QCEK-IFARVKHLGLELDTTLGTAFVSTFAKLGDLAAAR 384
Query: 555 NQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKC 607
+ F + + R+V +W +++ YA++G A + +++M D + N M + C
Sbjct: 385 DVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM-DCEPNAVTFMAVMDSC 438
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 277/567 (48%), Gaps = 23/567 (4%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNIC------VDEDALVNLVRLCEWKRGYDEG 114
+NP+ + +L G L AL+ +S+ + A LV C R +G
Sbjct: 2 QNPSGTILQLYHAGRLSAALRAFESIPSSAASASAHDRLSPAAYAALVAACSRLRSLPQG 61
Query: 115 LYLH------SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+H S + ++H ++ L N ++M+ + G A VF M DR+ SW +I
Sbjct: 62 RLVHRHLLASSARDRFLAHNTI-LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVI 120
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
+A+ +A+ L+ M G PD + + C + DL G++VH I++
Sbjct: 121 AAHAQNSRCADAMGLFSSMLR-SGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWES 179
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI- 287
+D+ V NAL+TMY K G + +F+ + +D ISW ++I+G + G M L +F
Sbjct: 180 GSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFRE 239
Query: 288 MMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ E + P+ SV A S +V + G ++HG +K + L MY
Sbjct: 240 MIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARC 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
+ KVF R+ES D+VSW ++I+ + L +A+ + M G PD IT+ ++L
Sbjct: 300 NELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC L G +H ++ GL +I++N+L+ MY++C A++VFH+ D++V+
Sbjct: 360 CACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVV 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGKEIHAH 524
+W SI+ + ++ E + ++ P + ++L ++LSA A +G K++HA+
Sbjct: 420 TWNSILTAC-VQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAY 478
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGAL 582
A ++G+ D L N L+D Y +CG + A F RDV +W+ L+ GYA+ G
Sbjct: 479 AFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKE 538
Query: 583 AEEFFRKM--IDSKGNWRKLMGLFRKC 607
A + F +M + K N +G+ C
Sbjct: 539 ALDLFARMRNLGVKPNHVTFVGVLTAC 565
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 263/516 (50%), Gaps = 24/516 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N A+ SM D+ AL + + C G +H+ K S + +
Sbjct: 126 NSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIV 185
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M+ K G +G + +F ++ D+DL SW +I G A+ G +AL +++ M G
Sbjct: 186 QNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGV 245
Query: 193 VKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
P+ + F V R C V + L+ G+++H +++ + + +L MY +C +L A
Sbjct: 246 HHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSA 305
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VF + D +SWN++I+ + G + ++LF MR+ + PD +T+ +++ A V
Sbjct: 306 RKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCAC--V 363
Query: 312 GDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G + L GR +H Y++K+G DV V N L+ MY + VF +DVV+W +
Sbjct: 364 GYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNS 423
Query: 370 MIS-CYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLAM 426
+++ C + L D + + ++ SMP D I++ +VLSA A LG ++ ++H A
Sbjct: 424 ILTACVQHQHLED-VFKLFSLLHR--SMPSLDRISLNNVLSASAELGYFEMVKQVHAYAF 480
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEAL 485
+ GL+ +++N LID Y+KC +D A ++F + ++V SW+S+I+G + EAL
Sbjct: 481 KVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 540
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NA 539
F +M L +KPN VT V +L+AC+R+G + G + I G +P +
Sbjct: 541 DLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEG----CYYYSIMKPEYGIVPTREHCSC 596
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
+LD+ R GR+ A + E D+ W LL
Sbjct: 597 VLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAA 632
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 188/369 (50%), Gaps = 4/369 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K + G + M+ + +L A VF ++ DL SWN LI ++
Sbjct: 270 GEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSA 329
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA+ L+ M G++PD T +L C G L +G+ +H ++++ G DV
Sbjct: 330 KGLLSEAMVLFSEM-RDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVI 388
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L++MY +C D A VF RD ++WN++++ ++ LF ++ +
Sbjct: 389 VSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSM 448
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D ++L++V+SAS +G ++ ++VH Y K+G D + N LI Y G+ ++
Sbjct: 449 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDAN 508
Query: 354 KVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K+F M + +DV SW+++I Y +A++ + M G P+ +T VL+AC+ +
Sbjct: 509 KLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRV 568
Query: 413 GNLDLGIKLHQLAM-RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTS 470
G +D G + + G++ + ++D+ ++ + +A + Q+P + ++I W +
Sbjct: 569 GLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKT 628
Query: 471 IILGLRLNN 479
++ R +N
Sbjct: 629 LLAASRTHN 637
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 271/505 (53%), Gaps = 8/505 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
+DEG +H+ K +V +G++ ++++VK G + A VF ++++ WN ++
Sbjct: 342 AFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLY 401
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G+ + +E + ++Q M ++ D +TF VL C + L G++VH I+ +
Sbjct: 402 GFVQNDLQEETIQMFQYMRR-ADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMD 460
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
AD+ V NA++ MY K G + A+ +F +P +D +SWNA+I G N E + + + M
Sbjct: 461 ADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRM 520
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + PD ++ ++ I+A + + G+++H IK + +V + LI +Y FG+
Sbjct: 521 KCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDV 580
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E KV + +++ +V +I+ + D+A+E +Q + +G P T AS+LS C
Sbjct: 581 ESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGC 640
Query: 410 ACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVIS 467
+ +G ++H +++ L++ + +L+ +Y KCK ++ A ++ ++PD KN++
Sbjct: 641 TGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVE 700
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
WT+ I G N S ++L+ F +M +++ + T S+L AC+ I AL GKEIH +
Sbjct: 701 WTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLII 760
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAE 584
+ G +AL+DMY +CG + ++ F N++++ WN ++ G+A+ G A
Sbjct: 761 KSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEAL 820
Query: 585 EFFRKMIDS--KGNWRKLMGLFRKC 607
F+KM +S K + L+G+ C
Sbjct: 821 LLFQKMQESQLKPDEVTLLGVLIAC 845
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 250/499 (50%), Gaps = 14/499 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N E+ ++ M+ ++ D+ V+++ C D G +H + K
Sbjct: 397 NAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIK 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA L M+ K G + A +F + +D SWN LI G A +EA+ +
Sbjct: 457 NSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYM 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM G + PD +F + C + + GK++H I++ ++ V ++LI +Y
Sbjct: 517 LKRMKCYG-IAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYS 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +R V + + NA+I+G +N + + LF + + P T +S
Sbjct: 576 KFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFAS 635
Query: 304 VISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
++S +G++VH Y +K + D S+ L+ +YL E+ K+ + + +
Sbjct: 636 ILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDH 695
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K++V WT IS Y + D+++ + M + DE T ASVL AC+ + L G ++
Sbjct: 696 KNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEI 755
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L +++G +SY A+ L+DMYSKC + + E+F ++ +K N++ W S+I+G N
Sbjct: 756 HGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGY 815
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ EAL+ F+KM + LKP+ VTL+ +L AC+ G + G+ + ++ G +P
Sbjct: 816 ANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVY----GIVPRV 871
Query: 540 -----LLDMYVRCGRMKPA 553
L+D+ R G ++ A
Sbjct: 872 DHYACLIDLLGRGGHLQEA 890
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 230/478 (48%), Gaps = 39/478 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGYAKA 174
LH+ V + L RLG+A + ++ + G +G+AW G + + ++ +A++
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G + L +QR+ G PD + VL C + L++G++VH V++ G+ +
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
L+ MY KC ++ AR VFDG+ D I W +MI+GY G Y + L LF M ++
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD +T ++IS S G +
Sbjct: 258 APDQVTYVTIIST-----------------------------------LASMGRLSDART 282
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+ R++ V+W +IS Y S L + Y+ M+ +G MP T AS+LSA A +
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
D G ++H A++ GL + + + ++LI++Y K CI A +VF +KN++ W +++ G
Sbjct: 343 FDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYG 402
Query: 475 LRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N+ E + F+ M +L+ + T VS+L AC + +L G+++H ++ + D
Sbjct: 403 FVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDAD 462
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ NA+LDMY + G + A F+ +D +WN L+ G A + A ++M
Sbjct: 463 LFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRM 520
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 240/472 (50%), Gaps = 5/472 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y + L L S + K S +S G L A + ++ +WN +I
Sbjct: 242 YQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISS 301
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y+++G E LY+ M G+ P TF +L + G+++H ++ G +A
Sbjct: 302 YSQSGLESEVFGLYKDMKR-QGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDA 360
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V V ++LI +YVK G + A+ VFD +++ + WNAM+ G+ +N + + +F MR
Sbjct: 361 NVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMR 420
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
++ D T SV+ A + +GR+VH IK D+ V N ++ MY G +
Sbjct: 421 RADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAID 480
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +FS + KD VSW +I + ++AV + M+ G PDE++ A+ ++AC+
Sbjct: 481 VAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACS 540
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ + G ++H +++ + S + ++LID+YSK ++ + +V + +++ +
Sbjct: 541 NIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINA 600
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I GL NNR EA+ F++++ + KP++ T SILS C + + GK++H++ L+
Sbjct: 601 LITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSA 660
Query: 530 -VAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERG 578
+ D L +L+ +Y++C ++ A + +++ W ++GYA+ G
Sbjct: 661 LLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNG 712
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 251/491 (51%), Gaps = 27/491 (5%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H+S+ L + L + G L A +F + WN +I G F DEAL Y
Sbjct: 2 HISINLVHE-LCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSN 60
Query: 187 MFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M VK D YT+ VL+ C +L GK VH H +R V N+L+ MY C
Sbjct: 61 MKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMC 120
Query: 246 G---------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DLVR VFD M KR ++WN +I+ Y Y + + F MM
Sbjct: 121 SSTTPDGKMVSGYSRCDLVRK--VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMM 178
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYLSFGN 348
++ + P ++ +V A +GD K VHG ++K+G + +D+ V + I MY G
Sbjct: 179 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC 238
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLS 407
E +KVF ++ W TMIS + + + ++ +Q +E+E + DE+T+ S +S
Sbjct: 239 LEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAIS 298
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A + L +L +LH ++ ++ + + N LI MYS+C ID + ++F +P+K+V+S
Sbjct: 299 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVS 358
Query: 468 WTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I N + EAL+ F +M +L +SVT+ ++LSA + + GK+ H + L
Sbjct: 359 WNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL 418
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN---SNERDVSAWNILLTGYAERGQGALA 583
R G+ F+G + + L+DMY + G ++ A N F S+ERD + WN +++GY + G A
Sbjct: 419 RNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQA 477
Query: 584 EEFFRKMIDSK 594
R+M+D K
Sbjct: 478 FLILRQMLDQK 488
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 236/449 (52%), Gaps = 9/449 (2%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF M R + +WN LI Y + + EA+ + M +G +KP +F V +
Sbjct: 142 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG-IKPSPVSFVNVFPAFSSLG 200
Query: 212 DLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
D K VH +++ G Y D+ VV++ I MY + G L A+ VFD +R+ WN M
Sbjct: 201 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTM 260
Query: 270 ISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
IS + +N ++G+ LF E D +TL S ISA+ + +L ++H +VIK
Sbjct: 261 ISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNV 320
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
V V N LI MY + + K+F M KDVVSW TMIS + + L D+A+ +
Sbjct: 321 AVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFY 380
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ + M D +T+ ++LSA + L N D+G + H +R G I + + + LIDMY+K
Sbjct: 381 EMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSG 439
Query: 449 CIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
I+ A VF + +++ +W S++ G N +A + R+M+ + PN VTL SI
Sbjct: 440 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 499
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDV 564
L AC G + GK++H ++R + + F+ AL+DMY + G + A N F+ +NE+ +
Sbjct: 500 LPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSI 559
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDS 593
++ ++ GY + G G A F +M S
Sbjct: 560 VTYSTMILGYGQHGMGESALFMFHRMQKS 588
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 223/422 (52%), Gaps = 9/422 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G L A VF +R+ WN +I + + F E + L+ + D
Sbjct: 232 MYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEV 291
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T + + + +++H VI+ V V+NALI MY +C + + +FD M
Sbjct: 292 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 351
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P++D +SWN MIS + +NG + LMLF M++ + D +T+++++SA+ + + +G+
Sbjct: 352 PEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGK 411
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEG 376
+ HGY+++ G + + + LI MY G E + VF + S +D +W +M+S Y
Sbjct: 412 QTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQ 470
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ L D+A + M + MP+ +T+AS+L AC G +D G +LH ++R L + +
Sbjct: 471 NGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFV 530
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
A LIDMYSK I A VF + +K++++++++ILG + AL F +M + +
Sbjct: 531 ATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGI 590
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAH---ALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+P++VTLV++LSAC+ G + G +I I + + F + DM R GR+
Sbjct: 591 QPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFC--CVADMLGRAGRVDK 648
Query: 553 AW 554
A+
Sbjct: 649 AY 650
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 224/433 (51%), Gaps = 16/433 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N SLE + +++ + +DE L++ + + ++ LH+ V K ++ V +
Sbjct: 268 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 327
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M+ + + ++ +F M ++D+ SWN +I + + G DEAL L+ M
Sbjct: 328 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEM-KKQD 386
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D T +L + + GK+ H +++R G + + + + LI MY K G + A+
Sbjct: 387 LMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQ 445
Query: 253 LVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF+ +RD+ +WN+M+SGY +NG + ++ M + V P+ +TL+S++ A
Sbjct: 446 NVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNP 505
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G G+++HG+ I+ +V V LI MY G+ E VFS+ K +V+++TM
Sbjct: 506 SGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTM 565
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y + + A+ + M+ G PD +T+ +VLSAC+ G +D G+++ + +MRT
Sbjct: 566 ILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE-SMRT-- 622
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDK-NVIS-WTSIILGLRLNNRSFE 483
Y I +T + DM + +DKA E + +K NV+ W S++ R+ ++ FE
Sbjct: 623 -VYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRI-HKQFE 680
Query: 484 ALIFFRKMMLNLK 496
K +L ++
Sbjct: 681 LGKLVAKKLLEME 693
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG ++QA L M + + + L +++ C D G LH +
Sbjct: 462 NSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIR 521
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + A + M+ K G + HA VF K ++ + +++ +I GY + G + AL +
Sbjct: 522 NDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFM 581
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+ RM G++PD T VL C + G ++
Sbjct: 582 FHRM-QKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616
>gi|255582620|ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528238|gb|EEF30293.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 212/379 (55%), Gaps = 4/379 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGG 192
N L + D +A +F +M + + +++NV+I G + A+ LY +M +G
Sbjct: 64 NFLLPRIIDLKDFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLG- 122
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ +TFP + +C + L G+ H V++ G+ D + ++LITMY KC L AR
Sbjct: 123 LKPNNFTFPFLFISCANLVALHCGQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSAR 182
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +RD +SWN+MISGY + G + + LF+ MRE +P MTL S++ A +G
Sbjct: 183 KVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSILGACGDLG 242
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D LG+ V + + + LI MY G+ +VF M KD+V+W MI+
Sbjct: 243 DLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMIT 302
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + D+A+ + +M G P+EIT+ VLSACA +G LDLG + A + GL
Sbjct: 303 GYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQH 362
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ +A+ L+DMY+KC +D AL VF +P KN +SW ++I L + R+ EAL F +M+
Sbjct: 363 DVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRAREALSLFSRML 422
Query: 493 --LNLKPNSVTLVSILSAC 509
++PN +T + + +AC
Sbjct: 423 NGSTVRPNDITFIGVFAAC 441
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 197/382 (51%), Gaps = 12/382 (3%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLV 294
N L+ + D A L+F MP + ++N MI G Y + L+ M+ + +
Sbjct: 64 NFLLPRIIDLKDFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLGL 123
Query: 295 DPDFMTLSSV-ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ T + IS + LV G+ H V+KMGF++D + + LI MY +
Sbjct: 124 KPNNFTFPFLFISCANLVA-LHCGQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSAR 182
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + +D+VSW +MIS Y +AV + M +G P E+T+ S+L AC LG
Sbjct: 183 KVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSILGACGDLG 242
Query: 414 NLDLGIKLHQLA--MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+L LG + L + L SY A+ LIDMY KC + A VF + +K++++W ++
Sbjct: 243 DLALGKWVEALIGDKKMELNSYT--ASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAM 300
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I G N S EA+ F M + PN +T+V +LSACA IGAL GK + +A + G+
Sbjct: 301 ITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIGALDLGKWVEMYASQRGL 360
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
D ++ +AL+DMY +CG + A F N ++ +WN +++ A G+ A F +
Sbjct: 361 QHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRAREALSLFSR 420
Query: 590 MIDS---KGNWRKLMGLFRKCQ 608
M++ + N +G+F C+
Sbjct: 421 MLNGSTVRPNDITFIGVFAACR 442
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 2/297 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G HS+V K + + ++ ++M+ K L A VF ++ +RD+ SWN +I GY K
Sbjct: 146 GQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSARKVFDEILERDIVSWNSMISGYTK 205
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
GF EA+ L+ M G +P T +L CG + DL GK V + E +
Sbjct: 206 MGFAREAVRLFMEM-REQGFEPVEMTLVSILGACGDLGDLALGKWVEALIGDKKMELNSY 264
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ALI MY KCGDL+ AR VFD M ++D ++WNAMI+GY +NG + + LF +MRE
Sbjct: 265 TASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMITGYAQNGASDEAMTLFNVMREAG 324
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P+ +T+ V+SA +G LG+ V Y + G DV V + L+ MY G+ +
Sbjct: 325 ITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSLDNAL 384
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSAC 409
+VF M K+ VSW MIS +A+ + +M+ P++IT V +AC
Sbjct: 385 RVFENMPHKNEVSWNAMISALAFHGRAREALSLFSRMLNGSTVRPNDITFIGVFAAC 441
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG+ ++A+ + M+E I +E +V ++ C D G ++ S+
Sbjct: 298 NAMITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIGALDLGKWVEMYASQ 357
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + +A + M+ K G L +A VF M ++ SWN +I A G EALSL
Sbjct: 358 RGLQHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRAREALSL 417
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTC 207
+ RM V+P+ TF V C
Sbjct: 418 FSRMLNGSTVRPNDITFIGVFAAC 441
>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 932
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 270/539 (50%), Gaps = 37/539 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + NG ++L+Y SM D ++ C G LH +V K
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 124 T----MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ +H+SV GN+ +SM+ K GD A VF ++ RD+ S N ++ G+A G F+E
Sbjct: 318 SGYSPEAHVSV--GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNAL 238
A + +M V ++PD+ T + CG + + G+ VH + +R ++ ++V+N++
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-- 296
I MY KCG +A L+F RD +SWN+MIS + +NG K LF +EV+ +
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF---KEVVSEYSC 492
Query: 297 ---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
T+ +++++ + G+ VH ++ K+G L +L
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG---------DLTSAFL--------- 534
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACL 412
++ + E++D+ SW ++IS S +++ +Q M EG + D IT+ +SA L
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
G + G H LA+++ + NTLI MY +CK I+ A++VF I D N+ SW +I
Sbjct: 595 GLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVI 654
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
L N E FR L L+PN +T V +LSA ++G+ G + H H +R G
Sbjct: 655 SALSQNKAGREVFQLFRN--LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ AL+DMY CG ++ F NS +SAWN +++ + G G A E F+++
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKEL 771
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 214/415 (51%), Gaps = 10/415 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VLR+ + + + VH ++ G D+ + L+T Y + G+LV + +FD + ++D
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WN+MI+ +NG Y+ + LFI M + D TL SA + + +H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
I+ G D S+CN L+ +Y N E VF+ ME +D+VSW T+++ + P K
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTL 440
+++ ++ M G D +T + V+SAC+ + L LG LH L +++G +++ + N++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPN 498
I MYSKC + A VF ++ ++VIS +I+ G N EA +M ++P+
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQF 557
T+VSI S C + G+ +H + +R+ + + N+++DMY +CG A F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 558 -NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID----SKGNWRKLMGLFRKC 607
+ RD+ +WN +++ +++ G A+ F++++ SK + ++ + C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 227/468 (48%), Gaps = 28/468 (5%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NA ++++ K +L A VF M RD+ SWN ++ G ++L ++ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG-S 283
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLV 249
G + D TF CV+ C + +L G+ +H VI+ GY EA V V N++I+MY KCGD
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISAS 308
A VF+ + RD IS NA+++G+ NG + + + M+ V + PD T+ S+ S
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 309 ELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + GR VHGY ++M S + V N +I MY G + E +F +D+VSW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLA 425
+MIS + + KA ++ + +E S T+ ++L++C +L G +H
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ G ++ + LE + D + SW S+I G + E+L
Sbjct: 524 QKLGDLTSAFL----------------RLETMSETRD--LTSWNSVISGCASSGHHLESL 565
Query: 486 IFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
F+ M ++ + +TL+ +SA +G ++ G+ H A++ D L N L+ M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y RC ++ A F ++ ++ +WN +++ ++ G + FR +
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 673
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 241/534 (45%), Gaps = 32/534 (5%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHS- 119
+ N+ LN NG E+A L+ MQ ++ I D +V++ +C EG +H
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V M ++ + N+ + M+ K G A +F RDL SWN +I +++ GF +
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 180 ALSLYQRMFW-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A +L++ + K + T +L +C L GK VH +
Sbjct: 479 AKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL--------------- 523
Query: 239 ITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDP 296
K GDL A L + M + RD SWN++ISG +G +++ L F M RE +
Sbjct: 524 ----QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 579
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ISAS +G GR HG IK D + N LI MY + E KVF
Sbjct: 580 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 639
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++ SW +IS + + + ++ ++ E P+EIT +LSA LG+
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTS 696
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G++ H +R G + ++ L+DMYS C ++ ++VF ++ +W S+I
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 477 LNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFD 533
+ +A+ F+++ N ++PN + +S+LSAC+ G + G + + GV
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEE 585
++DM R G+++ A+ + W LL+ G L +E
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKE 870
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 217/462 (46%), Gaps = 25/462 (5%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ + + G+L + +F ++ ++D+ WN +I + G + A+ L+ M G +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EF 186
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T + ++ +H I G D + NAL+ +Y K +L A VF
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M RD +SWN +++ NG K L F M + D +T S VISA + +
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 316 LGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG +HG VIK G+S + VSV N +I MY G+ E E VF + +DV+S +++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + + ++A QM + PD T+ S+ S C L G +H +R + S
Sbjct: 367 FAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 433 YII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N++IDMY KC +A +F ++++SW S+I N + +A F+++
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 492 MLNL---KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ K + T+++IL++C +L+ GK +H ++G FL
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------ 534
Query: 549 RMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R++ S RD+++WN +++G A G + F+ M
Sbjct: 535 RLETM-----SETRDLTSWNSVISGCASSGHHLESLRAFQAM 571
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ FM L V+ + + + + R VH + +K G D++ + L+ Y G
Sbjct: 83 MESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSS 142
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F ++ KDV+ W +MI+ + AV + M +G+ D T+ SA + L
Sbjct: 143 CLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLH 202
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LH LA+ TGL+ + N L+++Y+K + + A VF + ++++SW +I+
Sbjct: 203 LSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT 262
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N ++L +F+ M + ++VT ++SAC+ I L G+ +H ++ G +
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 533 DGFLP--NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
+ + N+++ MY +CG + A F RDV + N +L G+A G + EE F
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG---MFEEAF 377
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 228/420 (54%), Gaps = 12/420 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-DLVRAR 252
KP +Y +L+TC V G ++H HVI+ G E D V N+L+T+Y K G D R
Sbjct: 58 KPVLYA--SLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETR 115
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG+ +D ISW +MISGY G+ M L LF M V+P+ TLS+VI A +G
Sbjct: 116 KVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELG 175
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D KLGR HG V+ GF + + + LI M+ ++ ++F + D + WT++IS
Sbjct: 176 DLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIIS 235
Query: 373 CYEGSVLPDKAVE-TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ D+A+ Y M G PD T +VL+AC LG L G ++H + TG
Sbjct: 236 ALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFC 295
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRK 490
+++ ++L+DMY KC + ++ +F ++P KN +SW S +LG N F+++I FRK
Sbjct: 296 GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW-SALLGGYCQNGDFKSVIQIFRK 354
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M K + +IL CA + A+ GKE+H +R G D + +AL+D+Y +CG +
Sbjct: 355 ME---KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCI 411
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A F+ R++ WN ++ G+A+ G+G A F +M+ K ++ +G+ C
Sbjct: 412 EYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 471
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 281/547 (51%), Gaps = 19/547 (3%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NP S++ +LC +G L AL+ L S+ I +L++ C ++ GL +H+ V
Sbjct: 26 NPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHV 85
Query: 122 SKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
K+ +GN+ L+++ K G D VF + +D+ SW +I GY + G +
Sbjct: 86 IKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNS 145
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L L+ +M GV+P+ +T V++ C + DLK G+ H V+ G++++ + +ALI
Sbjct: 146 LELFWKML-AYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 204
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFM 299
M+ + L AR +FD + + D I W ++IS N + + L F M R+ + PD
Sbjct: 205 MHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGF 264
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T +V++A +G K G+EVH VI GF +V V + L+ MY G+ E +++F RM
Sbjct: 265 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 324
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ VSW+ ++ Y + ++ ++ ME D ++L CA L + G
Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK----VDLYCFGTILRTCAGLAAVRQGK 380
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H +R G +I+ + L+D+Y+KC CI+ A +F Q+P +N+I+W S+I G N
Sbjct: 381 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 440
Query: 480 RSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE-----IHAHALRIGVAFD 533
R EAL F +M+ +KP+ ++ + IL AC+ G + G+E + +++G+
Sbjct: 441 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH- 499
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++D+ R G ++ A +++ D S W LL +AE ++++
Sbjct: 500 ---YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVM 556
Query: 592 DSKGNWR 598
+ + ++
Sbjct: 557 ELEPDYH 563
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 201/408 (49%), Gaps = 19/408 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H VV + + +A + M + L A +F ++ + D W +I +
Sbjct: 180 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTR 239
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
FFDEAL + M G+ PD +TF VL CG + LK+GKEVH VI G+ +V
Sbjct: 240 NDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV 299
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ++L+ MY KCG + ++ +FD MP ++ +SW+A++ GY +NG++ + +F M +V
Sbjct: 300 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV- 358
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D +++ + + G+EVH I+ G DV V + L+ +Y G E +
Sbjct: 359 ---DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 415
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F +M +++++W +MI + + ++A+ + M EG PD I+ +L AC+ G
Sbjct: 416 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRG 475
Query: 414 NLDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVIS 467
+D G + ++ G+ Y + ++D+ + +++A E+ + D ++ S
Sbjct: 476 LVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRAGLLEEA-EILIETSDFRDDSS 530
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSACAR 511
+ +LG ++E K ++ L+P+ V L ++ A R
Sbjct: 531 LWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGR 578
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 265/516 (51%), Gaps = 10/516 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L L G+L + +++ +M ++ I ++ + L ++C +G H+ + +
Sbjct: 61 NLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR 120
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
M++ + + N L M+ A F K+ D+DL SW+ +I Y + G DEA+ L
Sbjct: 121 -MANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRL 179
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM +G + P+ F ++ + L GK++H +IR G+ A++ + + MYV
Sbjct: 180 FLRMLDLG-ITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYV 238
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A + + M +++ ++ ++ GY + L+LF M V+ D S
Sbjct: 239 KCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSI 298
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A +GD G+++H Y IK+G +VSV PL+ Y+ E + F + +
Sbjct: 299 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 358
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
SW+ +I+ Y S D+A+E ++ + ++G + + ++ AC+ + +L G ++H
Sbjct: 359 DFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHA 418
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++ GL++Y+ + +I MYSKC +D A + F I + ++WT+II + ++FE
Sbjct: 419 DAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFE 478
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI---HAHALRIGVAFDGFLPNA 539
AL F++M ++PN+VT + +L+AC+ G + GK+I + + D + N
Sbjct: 479 ALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHY--NC 536
Query: 540 LLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTG 573
++D+Y R G ++ A S E DV +W LL G
Sbjct: 537 MIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 217/443 (48%), Gaps = 5/443 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +++A++ M +L I + L+ D G +HS + + ++ +
Sbjct: 171 GRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIE 230
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+M+VK G L A KM ++ + L+ GY KA +AL L+ +M GV
Sbjct: 231 TLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMI-SEGV 289
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + F +L+ C + DL GK++H + I+ G E++V V L+ YVKC AR
Sbjct: 290 ELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQ 349
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ + + + SW+A+I+GY ++G++ + L +F +R V + +++ A V D
Sbjct: 350 AFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSD 409
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G ++H IK G +S + +I MY G + + F ++ D V+WT +I
Sbjct: 410 LICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICA 469
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLIS 432
+ +A+ ++ M+ G P+ +T +L+AC+ G + G K L ++ G+
Sbjct: 470 HAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNP 529
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I N +ID+YS+ + +ALEV +P + +V+SW S +LG ++R+ E +
Sbjct: 530 TIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKS-LLGGCWSHRNLEIGMIAADN 588
Query: 492 MLNLKP-NSVTLVSILSACARIG 513
+ L P +S T V + + A G
Sbjct: 589 IFRLDPLDSATYVIMFNLYALAG 611
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ H + +M S+ + N ++KMY + E+ F ++ +D+ SW+T+IS Y
Sbjct: 111 GKLFHNRLQRMANSNKF-IDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTE 169
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+AV + M G P+ ++++ + LDLG ++H +R G + I I
Sbjct: 170 EGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISI 229
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ +MY KC +D A +++ KN ++ T +++G R+ +AL+ F KM+ +
Sbjct: 230 ETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGV 289
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ + IL ACA +G L GK+IH++ +++G+ + + L+D YV+C R + A
Sbjct: 290 ELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQ 349
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F S +E + +W+ L+ GY + GQ A E F K I SKG
Sbjct: 350 AFESIHEPNDFSWSALIAGYCQSGQFDRALEVF-KAIRSKG 389
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
K+ +++ P S + C +GAL GK H R+ + + F+ N +L MY C
Sbjct: 85 KVGISINPRSYEY--LFKMCGTLGALSDGKLFHNRLQRMANS-NKFIDNCILKMYCDCKS 141
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F+ ++D+S+W+ +++ Y E G+ A F +M+D
Sbjct: 142 FTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLD 185
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 269/536 (50%), Gaps = 8/536 (1%)
Query: 63 PNSRLNELCLNGSLEQALKYLDSM---QELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
P RL L + +A ++ D++ L + D L L++ C G LH+
Sbjct: 65 PTPRLANALLRAHV-RARQWCDALLLIPCLRVRPDAFTLSLLLKACAMLPALAHGRALHA 123
Query: 120 VVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ ++ ++ + A + M+ K + + + + D+ ++ GY +
Sbjct: 124 LAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAA 183
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EAL + R G P T V+ + D+ G+ H VIR +E D+ +VNA+
Sbjct: 184 EALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAI 243
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y++ G + AR +F+GM ++D ++W+ M++GY ++G+ + L + M E + P+
Sbjct: 244 LGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNA 303
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+T+ SV+ A L D + GR VH +K+G +++V L+ MY+ EE ++F R
Sbjct: 304 VTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCR 363
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KD V+W +IS + + LPD+++ ++ M G PD +T+ VL+AC+ G +
Sbjct: 364 MSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQA 423
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
LH + TG I +A L+D+YSKC + A+ VF +K+V+ W+S+I G ++
Sbjct: 424 FCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVH 483
Query: 479 NRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFL 536
+A+ F+ M+ ++KPNS+T VS+LSAC+ G + GK I ++ GV +
Sbjct: 484 GLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVH 543
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
+A++D+ R G ++ A + N R D W LL ++E K++
Sbjct: 544 HSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLL 599
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 222/423 (52%), Gaps = 10/423 (2%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRA 251
V+PD +T +L+ C +P L G+ +H IR D V AL+ MY KC +V +
Sbjct: 95 VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGS 154
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISAS 308
++ + D + +M++GY +N + L F R V+ P +TL SVISA+
Sbjct: 155 INAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFF--SRHVVGQGFMPSPVTLVSVISAA 212
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D G+ H +VI+ F D+ + N ++ Y+ G + ++F M KDVV+W+
Sbjct: 213 AQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWS 272
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
M++ Y S +A+ Y+ M G P+ +T+ SV+ AC+ +++ G ++H +A++
Sbjct: 273 CMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKI 332
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + +A L+DMY KC C ++A+++F ++ K+ ++W +I G N E++ F
Sbjct: 333 GCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVF 392
Query: 489 RKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+ M+ P++VT+V +L+AC+ G + +H + + G F+ AL+D+Y +C
Sbjct: 393 KCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKC 452
Query: 548 GRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLF 604
G + A F S E+DV W+ +++GY G G A E F+ M+ S K N + +
Sbjct: 453 GNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVL 512
Query: 605 RKC 607
C
Sbjct: 513 SAC 515
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMK 551
L ++P++ TL +L ACA + AL G+ +HA A+R A+ D F+ AL+ MY +C M
Sbjct: 93 LRVRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMV 152
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+ N +N+ +E D+ ++TGY + A A EFF + + +G
Sbjct: 153 GSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQG 197
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 272/563 (48%), Gaps = 58/563 (10%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L EL EQA K LD + + + ++A++ V+ L+ H VVS +
Sbjct: 825 LTELGRFSDAEQARKLLDQRKIVKL---QEAVMEAVK----------KLHAHLVVSG-LH 870
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ + + DL A VF ++ F WN L+ G A++ +A+ Y++
Sbjct: 871 NCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKK 930
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
G+KPD TFP VL+ C K G+++H HVI+ G+ D+ V N+LI +Y CG
Sbjct: 931 A-QEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACG 989
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
L AR VF+ M +D +SWN++I GY ++ + L LF +M+ V D +T+ VIS
Sbjct: 990 ALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVIS 1049
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME------ 360
A +GD + + Y+ DV + N LI Y G + EKVFS+M+
Sbjct: 1050 ACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVT 1109
Query: 361 -------------------------SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+KD++SW++MI Y + ++E ++ M+
Sbjct: 1110 LNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKV 1169
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD + IASVLSACA LG LDLG +H R + + I+ N+LIDM++KC C+ +AL+
Sbjct: 1170 KPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQ 1229
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
VF + +K+ +SW SIILGL N EAL F M+ +PN VT + +L ACA
Sbjct: 1230 VFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQL 1289
Query: 515 LMCG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAW 567
+ G + H L + G ++D+ R G+++ A + + D W
Sbjct: 1290 VEEGLDHFERMKSVHNLEPQMKHYG----CVVDILSRAGQLEKAVSFISEMPLAPDPVVW 1345
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
ILL G A+AE +K+
Sbjct: 1346 RILLGACRTHGNVAVAEMATKKL 1368
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 206/427 (48%), Gaps = 36/427 (8%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMY-VKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K++H H++ G ++ +I +Y + DLV A VF + WN ++ G +
Sbjct: 858 KKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQ 917
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ ++ + +E + PD +T V+ A K G ++H +VIK+GF D+ V
Sbjct: 918 SDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFV 977
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N LI +Y + G VF+ M KDVVSW ++I Y + + +++M+AE
Sbjct: 978 SNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEV 1037
Query: 396 MPDEITIASVLSACACLGN--------------------------LDLGIKLHQLAMRTG 429
D++T+ V+SAC LG+ +D ++ QL
Sbjct: 1038 QADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEK 1097
Query: 430 LISYI-----IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ S + + N +I Y+K + A ++F QIP+K++ISW+S+I + ++
Sbjct: 1098 VFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDS 1157
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L FR+M +KP++V + S+LSACA +GAL GK IH + R + D + N+L+DM
Sbjct: 1158 LELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDM 1217
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKL 600
+ +CG ++ A F E+D +WN ++ G A G A + F M+ + N
Sbjct: 1218 FAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTF 1277
Query: 601 MGLFRKC 607
+G+ C
Sbjct: 1278 LGVLIAC 1284
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 235/489 (48%), Gaps = 29/489 (5%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
R+GN+ + ++ K G + ++ VF +M D R+L SW +I G+A G EAL L+ M
Sbjct: 646 ARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMR 705
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMYVKCGD 247
G+KP+ TF V+ C +++G ++ + + ++ +I M + G
Sbjct: 706 -RAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGR 764
Query: 248 LVRARLVFDGMPKRDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDP--DFMTLSSV 304
L A + +G+P ++ W ++ + GE G M+ ++ + DF LS+V
Sbjct: 765 LCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNV 824
Query: 305 IS----------ASELVGDEKL----------GREVHGYVIKMGFSDDVSVCNPLIKMY- 343
++ A +L+ K+ +++H +++ G + + +I++Y
Sbjct: 825 LTELGRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYA 884
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
L + KVF ++ES W T++ S P A+ Y+ + +G PD +T
Sbjct: 885 LHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFP 944
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
VL ACA G ++H ++ G + I ++N+LI +Y+ C + A VF+++ K
Sbjct: 945 FVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVK 1004
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW S+I G +NR E L F+ M ++ + VT+V ++SAC +G +
Sbjct: 1005 DVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMV 1064
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ + D +L N L+D Y R G+++ A F+ +++ N ++T YA+ G
Sbjct: 1065 RYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLV 1124
Query: 582 LAEEFFRKM 590
A++ F ++
Sbjct: 1125 SAKKIFDQI 1133
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 209/444 (47%), Gaps = 35/444 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L + + + A+ + QE + D +++ C EG +H+ V K
Sbjct: 909 NTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIK 968
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + N+ + ++ G L A VF +M +D+ SWN LIGGY++ E L+L
Sbjct: 969 LGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTL 1028
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPD-------LKRGKEVHVHV------------I 224
+ ++ V+ D T V+ C + D ++ + H+ V
Sbjct: 1029 F-KLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYC 1087
Query: 225 RFGY------------EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
R G + + +NA+IT Y K G+LV A+ +FD +P +D ISW++MI
Sbjct: 1088 RIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICA 1147
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + + L LF M+ V PD + ++SV+SA +G LG+ +H YV + D
Sbjct: 1148 YSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKAD 1207
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ N LI M+ G +E +VF+ ME KD +SW ++I + D+A++ + M
Sbjct: 1208 TIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLT 1267
Query: 393 EGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG P+E+T VL ACA ++ G+ ++ L + ++D+ S+ ++
Sbjct: 1268 EGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLE 1327
Query: 452 KALEVFHQIP-DKNVISWTSIILG 474
KA+ ++P + + W I+LG
Sbjct: 1328 KAVSFISEMPLAPDPVVW-RILLG 1350
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 231/475 (48%), Gaps = 31/475 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++ F +G++ +A +F +M R++ SW LI GY +A + EAL+L + M GG+
Sbjct: 549 NVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMM-AGGI 607
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P T V+ + + G+ ++ + + G +D V N+LI +Y K G + +
Sbjct: 608 SPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLK 667
Query: 254 VFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +R+ +SW ++ISG+ +G ++ L LF MR + P+ +T SVI+A G
Sbjct: 668 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGG 727
Query: 313 DEKLGRE-VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
+ G V + ++ +I M G E E++ + + +V W +
Sbjct: 728 LVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRIL 787
Query: 371 ISC---YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG--------- 418
+ C Y + ++A++ +E E S D +++VL+ + +
Sbjct: 788 LGCCSKYGEVAMGERAIKMISDLERE-SGGDFAVLSNVLTELGRFSDAEQARKLLDQRKI 846
Query: 419 IKLHQLAMRT--GLISYIIIANTLIDMYSKCKCID----------KALEVFHQIPDKNVI 466
+KL + M L ++++++ Y+ K I A +VF QI
Sbjct: 847 VKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTF 906
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
W +++ GL ++ +A++F++K +KP+++T +L ACA+ A G+++H H
Sbjct: 907 LWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHV 966
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQ 579
+++G D F+ N+L+ +Y CG + A + FN +DV +WN L+ GY++ +
Sbjct: 967 IKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNR 1021
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 45/377 (11%)
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD P W A + Y ++ L LF R+ L D F+ + V+ A +G
Sbjct: 440 VFDQSPA----PWRAFLKAYSHGPFPLEALHLFKHARQHLADDTFV-FTFVLKACAGLGW 494
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G ++H V++ GF V LI +Y+ E KVF M K+VVSW MI+
Sbjct: 495 HRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITG 554
Query: 374 YEG-------------------------------SVLPDKAVETYQMMEAEGSMPDEITI 402
+ G + L +A+ + M A G P EIT+
Sbjct: 555 FAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITV 614
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+V+ A + LG + +G L+ + G++S + N+LID+Y+K + +L+VF ++ D
Sbjct: 615 LAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLD 674
Query: 463 K-NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
+ N++SWTSII G ++ S EAL F +M +KPN +T +S+++AC+ G + G
Sbjct: 675 RRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLA 734
Query: 521 IH---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYA 575
+ I F ++DM R GR+ A E +V+ W ILL +
Sbjct: 735 FFKSMVYEYNIDPEIKHF--GCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCS 792
Query: 576 ERGQGALAEEFFRKMID 592
+ G+ A+ E + + D
Sbjct: 793 KYGEVAMGERAIKMISD 809
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 164/354 (46%), Gaps = 37/354 (10%)
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
K+ D+ W + Y+ F EAL L++ + D + F VL+ C G+ +
Sbjct: 439 KVFDQSPAPWRAFLKAYSHGPFPLEALHLFKHAR--QHLADDTFVFTFVLKACAGLGWHR 496
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G ++H V++ G+E V ALI +YV LV AR VFD MP ++ +SWN MI+G+
Sbjct: 497 AGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFA 556
Query: 275 ENGE-------------------------------YMKGLMLFIMMREVLVDPDFMTLSS 303
GE Y + L L M + P +T+ +
Sbjct: 557 GWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLA 616
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESK 362
VI A +G +G ++GY K G D V N LI +Y G+ + KVF M + +
Sbjct: 617 VIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRR 676
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
++VSWT++IS + L +A+E + M G P+ IT SV++AC+ G ++ G+
Sbjct: 677 NLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFF 736
Query: 423 Q-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
+ + + I +IDM + + +A ++ +P + NV W I+LG
Sbjct: 737 KSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVW-RILLG 789
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+R +SY A S AL+VF Q P W + + EAL
Sbjct: 410 LRHQALSYSSTAPVPATARSSTPPSRTALKVFDQSP----APWRAFLKAYSHGPFPLEAL 465
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F+ +L ++ +L ACA +G G ++HA ++ G F ++ AL+++YV
Sbjct: 466 HLFKHARQHLADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYV 525
Query: 546 RCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+ ++V +WN+++TG+A G+ A F +M
Sbjct: 526 MSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQM 571
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 248/493 (50%), Gaps = 42/493 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLG-LLPNSYTFPF 68
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC----------------- 245
+L++C + K G ++H HV++ GYE D+ V +LI+MYV+
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 246 --------------GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
G + AR +FD +P +D +SWNAMISGY E G Y + L LF M +
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +VISAS G +LGR+VH ++ GF ++ + N LI Y G E
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW +I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMYSKC I+ A +VF+ + K++ +W
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ R+ A F +M N +KP+ +T V +LSAC+ G L G+ I H
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALA 583
+I + + ++D+ G K A + + E D W LL G L
Sbjct: 429 YKITPKLEHY--GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELG 486
Query: 584 EEFFRKMIDSKGN 596
E+F + + + N
Sbjct: 487 EKFAQNLFKIEPN 499
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 212/475 (44%), Gaps = 48/475 (10%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
ALK M L + + L++ C + EGL +H V K L + + + +
Sbjct: 46 SALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLI 105
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF--------------------- 176
SM+V+ L A VF + RD+ S+ L+ GYA G+
Sbjct: 106 SMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNA 165
Query: 177 ----------FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+ EAL L++ M V+PD T V+ ++ G++VH +
Sbjct: 166 MISGYVETGNYKEALELFKEMMKT-NVRPDESTMVTVISASARSGSIELGRQVHSWIADH 224
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ +++ +VNALI Y KCG++ A +F G+ +D ISWN +I GY Y + L+LF
Sbjct: 225 GFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYL 344
M P+ +T+ S++ A +G +GR +H Y+ K G ++ S+ LI MY
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E +VF+ M K + +W MI + + A + + M PD+IT
Sbjct: 345 KCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVG 404
Query: 405 VLSACACLGNLDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+LSAC+ G LDLG + H + L Y +ID+ +A E+
Sbjct: 405 LLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY----GCMIDLLGHSGLFKEAEEMIST 460
Query: 460 IP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN---SVTLVSILSACA 510
+ + + + W S++ +++ + E F + + ++PN S L+S + A A
Sbjct: 461 MTMEPDGVIWCSLLKACKMHG-NVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 161/362 (44%), Gaps = 36/362 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V ++ + G +HS ++
Sbjct: 164 NAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIAD 223
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + + K G++ A +F + +D+ SWN+LIGGY + EAL L
Sbjct: 224 HGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLL 283
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G P+ T +L C + + G+ +HV++ + G + +LI M
Sbjct: 284 FQEML-RSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 342
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ M + +WNAMI G+ +G +F MR+ + PD +T
Sbjct: 343 YSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITF 402
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + K+ ++E
Sbjct: 403 VGLLSACSHAGMLDLGRHI-------------------------FRSMTHNYKITPKLE- 436
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ MI S L +A E M E PD + S+L AC GN++LG K
Sbjct: 437 ----HYGCMIDLLGHSGLFKEAEEMISTMTME---PDGVIWCSLLKACKMHGNVELGEKF 489
Query: 422 HQ 423
Q
Sbjct: 490 AQ 491
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 235/441 (53%), Gaps = 11/441 (2%)
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K+G AL L + + G + + +L+TC V G ++H HVI+ G E D
Sbjct: 95 KSGELSGALQLLKSID-PGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 153
Query: 233 DVVNALITMYVKCG-DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V N+L+T+Y K G D R VFDG+ +D ISW +MISGY G+ M L LF M
Sbjct: 154 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 213
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+P+ TLS+VI A +GD KLGR HG V+ GF + + + LI M+ ++
Sbjct: 214 YGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 273
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE-TYQMMEAEGSMPDEITIASVLSACA 410
++F + D + WT++IS + D+A+ Y M G PD T +VL+AC
Sbjct: 274 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 333
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG L G ++H + TG +++ ++L+DMY KC + ++ +F ++P KN +SW S
Sbjct: 334 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW-S 392
Query: 471 IILGLRLNNRSFEALI-FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+LG N F+++I FRKM K + +IL CA + A+ GKE+H +R G
Sbjct: 393 ALLGGYCQNGDFKSVIQIFRKME---KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 449
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFR 588
D + +AL+D+Y +CG ++ A F+ R++ WN ++ G+A+ G+G A F
Sbjct: 450 GWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFN 509
Query: 589 KMIDS--KGNWRKLMGLFRKC 607
+M+ K ++ +G+ C
Sbjct: 510 QMVKEGIKPDYISFIGILFAC 530
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 278/541 (51%), Gaps = 19/541 (3%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NP S++ +LC +G L AL+ L S+ I +L++ C ++ GL +H+ V
Sbjct: 85 NPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHV 144
Query: 122 SKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
K+ +GN+ L+++ K G D VF + +D+ SW +I GY + G +
Sbjct: 145 IKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNS 204
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L L+ +M GV+P+ +T V++ C + DLK G+ H V+ G++++ + +ALI
Sbjct: 205 LELFWKML-AYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 263
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFM 299
M+ + L AR +FD + + D I W ++IS N + + L F M R+ + PD
Sbjct: 264 MHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGF 323
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T +V++A +G K G+EVH VI GF +V V + L+ MY G+ E +++F RM
Sbjct: 324 TFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRM 383
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ VSW+ ++ Y + ++ ++ ME D ++L CA L + G
Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK----VDLYCFGTILRTCAGLAAVRQGK 439
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H +R G +I+ + L+D+Y+KC CI+ A +F Q+P +N+I+W S+I G N
Sbjct: 440 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 499
Query: 480 RSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE-----IHAHALRIGVAFD 533
R EAL F +M+ +KP+ ++ + IL AC+ G + G+E + +++G+
Sbjct: 500 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH- 558
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++D+ R G ++ A +++ D S W LL +AE ++++
Sbjct: 559 ---YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVM 615
Query: 592 D 592
+
Sbjct: 616 E 616
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 201/408 (49%), Gaps = 19/408 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H VV + + +A + M + L A +F ++ + D W +I +
Sbjct: 239 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTR 298
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
FFDEAL + M G+ PD +TF VL CG + LK+GKEVH VI G+ +V
Sbjct: 299 NDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV 358
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ++L+ MY KCG + ++ +FD MP ++ +SW+A++ GY +NG++ + +F M +V
Sbjct: 359 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV- 417
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D +++ + + G+EVH I+ G DV V + L+ +Y G E +
Sbjct: 418 ---DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 474
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F +M +++++W +MI + + ++A+ + M EG PD I+ +L AC+ G
Sbjct: 475 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRG 534
Query: 414 NLDLGIK-----LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVIS 467
+D G + ++ G+ Y + ++D+ + +++A E+ + D ++ S
Sbjct: 535 LVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRAGLLEEA-EILIETSDFRDDSS 589
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSACAR 511
+ +LG ++E K ++ L+P+ V L ++ A R
Sbjct: 590 LWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGR 637
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 273/545 (50%), Gaps = 28/545 (5%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNIC---VDEDALVNLVRLCEWKRG-YDEG 114
AT + N ++E S +AL +L +DE L ++ C RG G
Sbjct: 39 ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC---RGDLKRG 95
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H + + V + NA + M+ K G +A +F + D D+ SWN ++ G
Sbjct: 96 CQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---- 151
Query: 175 GFFDE---ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
FD+ AL+ RM GV D +T+ L C G G ++ V++ G E+D
Sbjct: 152 --FDDNQIALNFVVRM-KSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLF-IMM 289
+ V N+ ITMY + G AR VFD M +D ISWN+++SG + G + + +++F MM
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
RE V+ D ++ +SVI+ D KL R++HG IK G+ + V N L+ Y G
Sbjct: 269 REG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E + VF +M ++VVSWTTMIS + D AV + M +G P+E+T +++A
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
C + G+K+H L ++TG +S + N+ I +Y+K + ++ A + F I + +ISW
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG--ALMCGKEIHAHALR 527
++I G N S EAL F PN T S+L+A A ++ G+ HAH L+
Sbjct: 443 AMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
+G+ + +ALLDMY + G + + FN ++++ W +++ Y+ G
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 587 FRKMI 591
F KMI
Sbjct: 563 FHKMI 567
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 258/481 (53%), Gaps = 14/481 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL ++ M+ + D + C G+ GL L S V KT + +GN+F++
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDV 197
M+ + G A VF +M +D+ SWN L+ G ++ G F EA+ +++ M GV+ D
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR-EGVELDH 276
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F V+ TC DLK +++H I+ GYE+ ++V N L++ Y KCG L + VF
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R+ +SW MIS ++ + +F+ MR V P+ +T +I+A + K G
Sbjct: 337 MSERNVVSWTTMISSNKDDA-----VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++HG IK GF + SV N I +Y F E+ +K F + ++++SW MIS + +
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYII 435
+A++ + AE +MP+E T SVL+A A ++ + G + H ++ GL S +
Sbjct: 452 GFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRKMML- 493
+++ L+DMY+K ID++ +VF+++ KN WTSII ++ FE ++ F KM+
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS-SHGDFETVMNLFHKMIKE 569
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKP 552
N+ P+ VT +S+L+AC R G + G EI + + + + ++DM R GR+K
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 553 A 553
A
Sbjct: 630 A 630
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 13/403 (3%)
Query: 64 NSRLNELCLNGSL--EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS L+ L G+ E + + D M+E + +D + +++ C + +H +
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + +GN +S + K G L VF +M +R++ SW +I D+A+
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAV 357
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
S++ M + GV P+ TF ++ +K G ++H I+ G+ ++ V N+ IT+
Sbjct: 358 SIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K L A+ F+ + R+ ISWNAMISG+ +NG + L +F+ + P+ T
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475
Query: 302 SSVISASELVGD--EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV++A D K G+ H +++K+G + V + L+ MY GN +E EKVF+ M
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ WT++IS Y + + + M E PD +T SVL+AC G +D G
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 595
Query: 420 KLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ + + L + ++DM + + +A E+ ++P
Sbjct: 596 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 247/454 (54%), Gaps = 17/454 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + + +++FG + A+ VF +M +RD+ +WN ++ G + EA+ L+ RM
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM- 160
Query: 189 WVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
VG GV D T VL C + D +HV+ ++ G + ++ V NALI +Y K G
Sbjct: 161 -VGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGM 219
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L A+ VF GM RD ++WN++ISG + G+ L +F MR V PD +TL S+ SA
Sbjct: 220 LEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASA 279
Query: 308 SELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
GD + + +H YV++ G+ DD+ N ++ MY N E +++F M +D VS
Sbjct: 280 IAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVS 339
Query: 367 WTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W T+I+ Y + L ++AVE Y M + EG + T SVL A + LG L G+++H L+
Sbjct: 340 WNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALS 399
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ GL + + LID+Y+KC + +A+ +F ++P ++ W +II GL ++ EAL
Sbjct: 400 IKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEAL 459
Query: 486 IFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA----- 539
F +M +KP+ VT VS+L+AC+ G + G+ + V +D +P A
Sbjct: 460 TLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD---VMQVTYD-IVPIAKHYAC 515
Query: 540 LLDMYVRCGRMKPAWN--QFNSNERDVSAWNILL 571
+ DM R G++ A+N Q + D + W LL
Sbjct: 516 MADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALL 549
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 219/432 (50%), Gaps = 9/432 (2%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
N LI +++A A L + + +PD +TFP ++R P ++H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRA---APSNASAAQLHACA 93
Query: 224 IRFGY-EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+R G V +L+ Y++ G + A VFD M +RD +WNAM+SG N +
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ LF M V D +T+SSV+ L+GD+ L +H Y +K G ++ VCN LI +
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G EE + VF ME +D+V+W ++IS E A++ +Q M G PD +T+
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
S+ SA A G+ LH MR G + II N ++DMY+K I+ A +F +P
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP 333
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGK 519
++ +SW ++I G N + EA+ + M + LK T VS+L A + +GAL G
Sbjct: 334 VQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM 393
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+HA +++IG+ D ++ L+D+Y +CG++ A F R WN +++G G
Sbjct: 394 RMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHG 453
Query: 579 QGALAEEFFRKM 590
GA A F +M
Sbjct: 454 HGAEALTLFSRM 465
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 13/330 (3%)
Query: 284 MLFIMMREVL-----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCN 337
+ F ++R +L PD T S+I A+ ++H +++G V
Sbjct: 51 LAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACALRLGLVRPSVFTSG 107
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ YL FG E KVF M +DV +W M+S + +AV + M EG
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG 167
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D +T++SVL C LG+ L + +H A++ GL + + N LID+Y K +++A VF
Sbjct: 168 DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVF 227
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
H + +++++W SII G ++ AL F+ M + P+ +TLVS+ SA A+ G
Sbjct: 228 HGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGR 287
Query: 517 CGKEIHAHALRIGVAFDGFLP-NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
K +H + +R G D + NA++DMY + ++ A F+S +D +WN L+TGY
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGY 347
Query: 575 AERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ G A E + M +G + + G F
Sbjct: 348 MQNGLANEAVERYGHMQKHEG-LKAIQGTF 376
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 163/401 (40%), Gaps = 36/401 (8%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS-VRL 132
G ALK M+ + D LV+L LH V + + +
Sbjct: 249 GQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIA 308
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA + M+ K ++ A +F M +D SWN LI GY + G +EA+ Y M G
Sbjct: 309 GNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEG 368
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K TF VL + L++G +H I+ G DV V LI +Y KCG L A
Sbjct: 369 LKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAM 428
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F+ MP+R WNA+ISG +G + L LF M++ + PD +T S+++A G
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG 488
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR + M + D+ P+ K Y + + R D
Sbjct: 489 LVDQGRS---FFDVMQVTYDIV---PIAKHYACMAD------MLGRAGQLD--------- 527
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGL 430
E + ++ PD ++L AC GN+++G Q +
Sbjct: 528 ------------EAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPEN 575
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ Y ++ + + K +D+ + + + W+SI
Sbjct: 576 VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 616
>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 263/548 (47%), Gaps = 44/548 (8%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+R C R + G +H+ + K V L N +SM+ +F ++ A VF +M DR++
Sbjct: 10 LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+W ++ + G EA+ LY M P+ Y + VL+ CG V DL GK +
Sbjct: 70 VTWTTMVSAFTDGGRPYEAIRLYNDM--PKSETPNGYMYSAVLKACGFVGDLGLGKLIQE 127
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDL-------------------------------VR 250
+ +AD ++N+L+ M+VKCG L V
Sbjct: 128 RIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVE 187
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F MP + +SWN+MI+G+ +NG + L MM + + D T + S L
Sbjct: 188 AEKLFHCMPHPNVVSWNSMIAGFADNGS-QRALEFVSMMHKRCIKLDDFTFPCALKISAL 246
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES------KDV 364
G +G++VH YV K+G+ + LI MY + + E K+F + S ++
Sbjct: 247 HGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
W +M+S Y + A+ + G++ D T L C L + +G++LH L
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ G ++ + L+D+Y+K ID AL +FH++P K++I+W+ +I+G ++ A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
F+ M+ L + + + +IL C+ + +L GK++HA ++ G +GF +LLDM
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKL 600
Y +CG ++ A F E+D+ +W ++ G + G+ A A FF +MI S N
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546
Query: 601 MGLFRKCQ 608
+G+ C+
Sbjct: 547 LGVLSACR 554
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 198/400 (49%), Gaps = 9/400 (2%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V +S + N +S + K G + A +F M ++ SWN +I G+A G A
Sbjct: 160 VFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNG-SQRA 218
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M +K D +TFPC L+ L GK+VH +V + GYE+ ++ALI
Sbjct: 219 LE-FVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALID 277
Query: 241 MYVKCGDLVRARLVFDGMPK-----RDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLV 294
MY C DL+ A +FD D ++ WN+M+SGY N L L +
Sbjct: 278 MYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGA 337
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D T + + ++G ++HG ++ G+ D V + L+ +Y N ++
Sbjct: 338 LLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALA 397
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F R+ KD+++W+ +I L A ++ M + D I+++L C+ L +
Sbjct: 398 IFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLAS 457
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G ++H L +++G +L+DMYSKC I+ AL +F +K+++SWT II+G
Sbjct: 458 LRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVG 517
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N ++ EA+ FF +M+ + + PN +T + +LSAC G
Sbjct: 518 CGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAG 557
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 212/466 (45%), Gaps = 26/466 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NGS ++AL+++ M + I +D+ +++ G +HS V+K
Sbjct: 204 NSMIAGFADNGS-QRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTK 262
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD------RDLFSWNVLIGGYAKAGFF 177
S +A + M+ DL A +F + +L WN ++ GY
Sbjct: 263 LGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCD 322
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
AL+L + G + D YTF L+ C + + G ++H ++ GYE D V +
Sbjct: 323 QAALNLLSEIHCSGAL-LDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSI 381
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ +Y K ++ A +F +P++D I+W+ +I G + G +F M E++ + D
Sbjct: 382 LVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEID 441
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+S+++ + + G++VH +K G+ + L+ MY G E+ +F
Sbjct: 442 HFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC 501
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ KD+VSWT +I + +AV + M G P+EIT VLSAC G ++
Sbjct: 502 CEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEE 561
Query: 418 GIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-- 472
+ +M++ GL ++ ++D+ + ++A ++ +P + N +W +++
Sbjct: 562 ARSIFN-SMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGA 620
Query: 473 LGLR----LNNRSFEALIFFRKMMLNLKPNS-VTLVSILSACARIG 513
G R L NR + L L PN T V++ +A A +G
Sbjct: 621 CGTRNDTKLINRVADGL-------LEATPNDPSTYVTLSNAYASLG 659
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
IA L CA + G +H + G ++ + +AN LI MY++ + A +VF ++
Sbjct: 6 IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
D+N+++WT+++ R +EA+ + M + PN ++L AC +G L GK I
Sbjct: 66 DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSETPNGYMYSAVLKACGFVGDLGLGKLI 125
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQG 580
+ D L N+L+DM+V+CG + A F++ R + WNI+++GY++ G
Sbjct: 126 QERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLM 185
Query: 581 ALAEEFFRKM 590
AE+ F M
Sbjct: 186 VEAEKLFHCM 195
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 281/552 (50%), Gaps = 24/552 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNA 135
E L Y+D M L I D A L++ + D G +H+ V K + SV + N
Sbjct: 76 EAVLTYID-MIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANT 134
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++++ K GD G + VF ++ +R+ SWN LI ++ AL ++ M V+P
Sbjct: 135 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DEDVEP 193
Query: 196 DVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+T V C P L GK+VH + +R G E + ++N L+ MY K G L ++
Sbjct: 194 SSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSK 252
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ RD ++WN ++S +N ++++ L M V+PD T+SSV+ A +
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 313 DEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+E+H Y +K G D+ S V + L+ MY + G +VF M + + W MI
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y + ++A+ + +M E+ G + + T+A V+ AC G +H ++ GL
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGL 432
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ N L+DMYS+ ID A +F ++ D+++++W +II G + R +AL+ K
Sbjct: 433 DRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHK 492
Query: 491 MML------------NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
M + +LKPNS+TL++IL +CA + AL GKEIHA+A++ +A D + +
Sbjct: 493 MQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 552
Query: 539 ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKG 595
AL+DMY +CG ++ + F+ R+V WN+++ Y G A + R M+ K
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKP 612
Query: 596 NWRKLMGLFRKC 607
N + +F C
Sbjct: 613 NEVTFISVFAAC 624
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 268/529 (50%), Gaps = 23/529 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E AL+ M + ++ LV++ C EGL + V
Sbjct: 164 NSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS-NFPMPEGLLMGKQVHA 222
Query: 124 ---TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
L+ + N ++M+ K G L + + G RDL +WN ++ + F EA
Sbjct: 223 YGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEA 282
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALI 239
L Y R + GV+PD +T VL C + L+ GKE+H + ++ G + + V +AL+
Sbjct: 283 LE-YLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 341
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY C ++ VFDGM R WNAMI+GY +N + L+LFI M E + +
Sbjct: 342 DMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANS 401
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++ V+ A G +HG+V+K G D V N L+ MY G + +++F +
Sbjct: 402 TTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGK 461
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAV---ETYQMMEAEGS--------MPDEITIASVLS 407
ME +D+V+W T+I+ Y S + A+ Q++E + S P+ IT+ ++L
Sbjct: 462 MEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILP 521
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L L G ++H A++ L + + + + L+DMY+KC C+ + +VF QIP +NVI+
Sbjct: 522 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVIT 581
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W I++ ++ S +A+ R MM+ +KPN VT +S+ +AC+ G + G +I +
Sbjct: 582 WNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMK 641
Query: 527 R-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD---VSAWNILL 571
+ GV ++D+ R GR+K A+ N R+ AW+ LL
Sbjct: 642 KDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 232/447 (51%), Gaps = 16/447 (3%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W L+ ++ EA+ Y M V G+KPD + FP +L+ + D+ GK++H HV
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMI-VLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119
Query: 224 IRFGYEAD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+FGY D V V N L+ +Y KCGD VFD + +R+++SWN++IS ++
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 283 LMLFIMMREVLVDPDFMTLSSV-ISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPL 339
L F M + V+P TL SV ++ S E L G++VH Y ++ G + + N L
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-IINTL 238
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMP 397
+ MY G + + E +D+V+W T++S C L +A+E + M EG P
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFL--EALEYLREMVLEGVEP 296
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEV 456
D TI+SVL AC+ L L G +LH A++ G L + + L+DMY CK + V
Sbjct: 297 DGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRV 356
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGA 514
F + D+ + W ++I G N EAL+ F +M L NS T+ ++ AC R GA
Sbjct: 357 FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
+ IH ++ G+ D F+ NAL+DMY R G++ A F E RD+ WN ++TG
Sbjct: 417 FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITG 476
Query: 574 Y--AERGQGALAEEFFRKMIDSKGNWR 598
Y +ER + AL ++++ K + R
Sbjct: 477 YVFSERHEDALLMLHKMQILERKASER 503
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 247/478 (51%), Gaps = 43/478 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N LS + K GDL +F M +RD SWN LI GY G EA+ Y M G +
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ TF +L + G+++H +++FG+ A V V ++L+ MY K G + A
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 254 VFD-------------------------------GMPKRDRISWNAMISGYFENGEYMKG 282
VFD GM +RD ISW MI+G +NG +
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ LF MR+ + D T SV++A + K G+E+H +I+ G++ +V V + L+ M
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + E VF RM +K+VVSWT M+ Y + ++AV + M+ G PD+ T+
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SV+S+CA L +L+ G + H A+ +GLIS+I ++N LI +Y KC I+ + ++F ++
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
++ +SWT+++ G ++ E + F +M++ LKP++VT +++LSAC+R G + G++
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQY 494
Query: 522 HAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
L+ G +P ++D++ R GR++ A N N D W LL+
Sbjct: 495 FESMLKD----HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 210/390 (53%), Gaps = 34/390 (8%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
N +++ Y K GDL + +F MP RD +SWN++ISGY G ++ + + MM++ ++
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY----------- 343
+ + +T S+++ G LGR++HG ++K GF V V + L+ MY
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 344 --------------------LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
L G ++ +++F M+ +D +SWTTMI+ + L +A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ ++ M EG D+ T SVL+AC L L G ++H L +R+G + + + L+DM
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
Y KC+ + A VF ++ +KNV+SWT++++G N S EA+ F M N ++P+ TL
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
S++S+CA + +L G + H AL G+ + NAL+ +Y +CG ++ + F+
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RD +W L++GYA+ G+ + F +M+
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERML 464
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 193/366 (52%), Gaps = 6/366 (1%)
Query: 117 LHSVVSKTMSHLSVR---LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
L SV S+ + R + N ++ ++ G + + +F M +RD SW +I G +
Sbjct: 188 LVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQ 247
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA+ L++ M G+ D YTF VL CGG+ LK GKE+H +IR GY +V
Sbjct: 248 NGLEAEAMDLFRDMRQ-EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVF 306
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +AL+ MY KC + A VF M ++ +SW AM+ GY +NG + + +F M+
Sbjct: 307 VGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG 366
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++PD TL SVIS+ + + G + H + G ++V N LI +Y G+ E+
Sbjct: 367 IEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSN 426
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++F M +D VSWT ++S Y ++ ++ ++ M +G PD +T +VLSAC+ G
Sbjct: 427 QLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAG 486
Query: 414 NLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G + + ++ G+I + +ID++ + +++A +++P + I W ++
Sbjct: 487 LVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATL 546
Query: 472 ILGLRL 477
+ RL
Sbjct: 547 LSSCRL 552
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 164/308 (53%), Gaps = 9/308 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG +A+ M++ + +D+ +++ C R EG +H+++ ++ + +
Sbjct: 245 LIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHN 304
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G+A + M+ K + +A VF +M ++++ SW ++ GY + GF +EA+ ++ M
Sbjct: 305 VFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM-Q 363
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++PD +T V+ +C + L+ G + H + G + + V NALIT+Y KCG +
Sbjct: 364 RNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIE 423
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ +FD M RD +SW A++SGY + G+ + + LF M + PD +T +V+SA
Sbjct: 424 DSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACS 483
Query: 310 LVGDEKLGREVHGYVIK----MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDV 364
G + G++ ++K + FSD + +I ++ G EE + ++M S D
Sbjct: 484 RAGLVERGQQYFESMLKDHGIIPFSDHYTC---MIDLFGRAGRLEEAKNFINKMPFSPDS 540
Query: 365 VSWTTMIS 372
+ W T++S
Sbjct: 541 IGWATLLS 548
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 174/349 (49%), Gaps = 47/349 (13%)
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
L ++ + L +P+ +++I+A +G+ R V KM + S N ++ Y
Sbjct: 27 LHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFD---KMPQPNSFS-WNTMLSAYS 82
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMIS---CYEGSVLPDKAVETYQMMEAEGSMP-DEI 400
G+ +++FS M ++D VSW ++IS CY GSV+ +AV+TY M +G + + I
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCY-GSVV--EAVKTYNSMMKDGVLNLNRI 139
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T +++L + G +DLG ++H ++ G +Y+ + ++L+DMY+K + A +VF ++
Sbjct: 140 TFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199
Query: 461 PDKNV-------------------------------ISWTSIILGLRLNNRSFEALIFFR 489
++NV ISWT++I GL N EA+ FR
Sbjct: 200 QERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFR 259
Query: 490 KM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M + + T S+L+AC + AL GKEIH +R G + F+ +AL+DMY +C
Sbjct: 260 DMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
++ A F ++V +W +L GY GQ +EE R D + N
Sbjct: 320 SVRYAEAVFKRMANKNVVSWTAMLVGY---GQNGFSEEAVRVFCDMQRN 365
>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 263/548 (47%), Gaps = 44/548 (8%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+R C R + G +H+ + K V L N +SM+ +F ++ A VF +M DR++
Sbjct: 10 LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+W ++ + G EA+ LY M P+ Y + VL+ CG V DL GK +
Sbjct: 70 VTWTTMVSAFTDGGRPYEAIRLYNDM--PKSETPNGYMYSAVLKACGFVGDLGLGKLIQE 127
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDL-------------------------------VR 250
+ +AD ++N+L+ M+VKCG L V
Sbjct: 128 RIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVE 187
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F MP + +SWN+MI+G+ +NG + L MM + + D T + S L
Sbjct: 188 AEKLFHCMPHPNVVSWNSMIAGFADNGS-QRALEFVSMMHKRCIKLDDFTFPCALKISAL 246
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES------KDV 364
G +G++VH YV K+G+ + LI MY + + E K+F + S ++
Sbjct: 247 HGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
W +M+S Y + A+ + G++ D T L C L + +G++LH L
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ G ++ + L+D+Y+K ID AL +FH++P K++I+W+ +I+G ++ A
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLA 426
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
F+ M+ L + + + +IL C+ + +L GK++HA ++ G +GF +LLDM
Sbjct: 427 FSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDM 486
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKL 600
Y +CG ++ A F E+D+ +W ++ G + G+ A A FF +MI S N
Sbjct: 487 YSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITF 546
Query: 601 MGLFRKCQ 608
+G+ C+
Sbjct: 547 LGVLSACR 554
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 198/400 (49%), Gaps = 9/400 (2%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V +S + N +S + K G + A +F M ++ SWN +I G+A G A
Sbjct: 160 VFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADNG-SQRA 218
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M +K D +TFPC L+ L GK+VH +V + GYE+ ++ALI
Sbjct: 219 LE-FVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLSALID 277
Query: 241 MYVKCGDLVRARLVFDGMPK-----RDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLV 294
MY C DL+ A +FD D ++ WN+M+SGY N L L +
Sbjct: 278 MYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGA 337
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D T + + ++G ++HG ++ G+ D V + L+ +Y N ++
Sbjct: 338 LLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALA 397
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F R+ KD+++W+ +I L A ++ M + D I+++L C+ L +
Sbjct: 398 IFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLAS 457
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G ++H L +++G +L+DMYSKC I+ AL +F +K+++SWT II+G
Sbjct: 458 LRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVG 517
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N ++ EA+ FF +M+ + + PN +T + +LSAC G
Sbjct: 518 CGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAG 557
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 212/466 (45%), Gaps = 26/466 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NGS ++AL+++ M + I +D+ +++ G +HS V+K
Sbjct: 204 NSMIAGFADNGS-QRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTK 262
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD------RDLFSWNVLIGGYAKAGFF 177
S +A + M+ DL A +F + +L WN ++ GY
Sbjct: 263 LGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCD 322
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
AL+L + G + D YTF L+ C + + G ++H ++ GYE D V +
Sbjct: 323 QAALNLLSEIHCSGALL-DSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSI 381
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ +Y K ++ A +F +P++D I+W+ +I G + G +F M E++ + D
Sbjct: 382 LVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEID 441
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+S+++ + + G++VH +K G+ + L+ MY G E+ +F
Sbjct: 442 HFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC 501
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ KD+VSWT +I + +AV + M G P+EIT VLSAC G ++
Sbjct: 502 CEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEE 561
Query: 418 GIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-- 472
+ +M++ GL ++ ++D+ + ++A ++ +P + N +W +++
Sbjct: 562 ARSIFN-SMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGA 620
Query: 473 LGLR----LNNRSFEALIFFRKMMLNLKPNS-VTLVSILSACARIG 513
G R L NR + L L PN T V++ +A A +G
Sbjct: 621 CGTRNDTKLINRVADGL-------LEATPNDPSTYVTLSNAYASLG 659
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
IA L CA + G +H + G ++ + +AN LI MY++ + A +VF ++
Sbjct: 6 IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
D+N+++WT+++ R +EA+ + M + PN ++L AC +G L GK I
Sbjct: 66 DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSETPNGYMYSAVLKACGFVGDLGLGKLI 125
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQG 580
+ D L N+L+DM+V+CG + A F++ R + WNI+++GY++ G
Sbjct: 126 QERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLM 185
Query: 581 ALAEEFFRKM 590
AE+ F M
Sbjct: 186 VEAEKLFHCM 195
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 238/450 (52%), Gaps = 14/450 (3%)
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+ G R S+N+LI + +AG ++AL L+ M V PD +T +++C +
Sbjct: 125 FRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRM 184
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
DL G+ V + + G+ D V+N+LI MY CGD+V A ++F + + I+WNAMI
Sbjct: 185 CDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMI 244
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+GY +NG++ + + +F M EV D +TL SV +A +GD LG+ + Y + G
Sbjct: 245 AGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGML 304
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ L+ MY G ++ ++F RM S+DVV+W+ MIS Y S +A+ + M
Sbjct: 305 RSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM 364
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ P+++T+ SVLSACA LG L+ G +H R L +I+ L+D Y+KC CI
Sbjct: 365 QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCI 424
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSAC 509
A++ F +P +N +WT++I G+ N RS EAL F M+ N++P VT + +L AC
Sbjct: 425 KDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSN---E 561
+ G L+ +E H + + G P ++D+ R G + A+ QF N E
Sbjct: 485 SH-GCLV--EEGRRHFTSMTQDY-GICPRIEHYGCMVDLLGRAGLIDEAY-QFIRNMPIE 539
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ W LL+ + EE ++++
Sbjct: 540 PNAVVWRALLSACTVHKNVEIGEEALKQIV 569
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 182/338 (53%), Gaps = 3/338 (0%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLG 317
P R S+N +I + G L LF+ M+ + V PD T+++ + + + D +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R V Y K GF D V N LI MY S G+ +F ++ K V++W MI+ Y +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ VE ++ M + DE+T+ SV +AC LG+ +LG + + A G++ +A
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLK 496
L+DMY+KC +DKA +F ++ ++V++W+++I G ++R EAL F +M +
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN VT+VS+LSACA +GAL GK +H++ R + L AL+D Y +CG +K A
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S R+ W L+ G A G+ A E F M+++
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEA 468
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 190/402 (47%), Gaps = 4/402 (0%)
Query: 74 GSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G E AL +++ + + + D+ + N V+ C G + + K + +
Sbjct: 149 GHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFV 208
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ GD+ A +F + + + +WN +I GY K G + E + +++ M V
Sbjct: 209 LNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRA 268
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+V T V CG + D G+ + + G ++ AL+ MY KCG+L +AR
Sbjct: 269 PFDEV-TLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKAR 327
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M RD ++W+AMISGY ++ + L +F M+ V+P+ +T+ SV+SA ++G
Sbjct: 328 RLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLG 387
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+ VH Y+ + V + L+ Y G ++ K F M ++ +WT +I
Sbjct: 388 ALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIK 447
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
+ +A+E + M P ++T VL AC+ ++ G + + G+
Sbjct: 448 GMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGIC 507
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
I ++D+ + ID+A + +P + N + W +++
Sbjct: 508 PRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 366 SWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
S+ +I + + P+ A+ + +M++ PD+ T+A+ + +C+ + +L +G +
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A + G + + N+LI MY+ C + A +FH + K VI+W ++I G N E
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEV 256
Query: 485 LIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ F+ M+ P + VTL+S+ +AC R+G G+ I +A G+ L AL+DM
Sbjct: 257 VEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDM 316
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
Y +CG + A F+ + RDV AW+ +++GY + + A F +M ++ N
Sbjct: 317 YAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 161/375 (42%), Gaps = 47/375 (12%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++ ++ M E+ DE L+++ C + G ++ + S L
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G+L A +F +M RD+ +W+ +I GY ++ EAL+++ M
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT-E 368
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ T VL C + L+ GK VH ++ R V + AL+ Y KCG + A
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ MP R+ +W A+I G NG + L LF M E ++P +T V+ A
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACS--- 485
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-----KDVVSW 367
HG ++ EEG + F+ M + +
Sbjct: 486 --------HGCLV------------------------EEGRRHFTSMTQDYGICPRIEHY 513
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAM 426
M+ + L D+A + + M E P+ + ++LSAC N+++G + L Q+
Sbjct: 514 GCMVDLLGRAGLIDEAYQFIRNMPIE---PNAVVWRALLSACTVHKNVEIGEEALKQIVP 570
Query: 427 RTGLIS--YIIIANT 439
S YI+++NT
Sbjct: 571 LDPCHSGNYILLSNT 585
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 240/456 (52%), Gaps = 3/456 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
L+R C G +H+V ++ + + A + M+ + GD+ A +G +
Sbjct: 103 LLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKP 162
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ ++ GY + G +EAL + R GV T + + +++G+
Sbjct: 163 DIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQAC 222
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H +V+R D+ +VN +++ YVK GD + +F+GM RD I+W+ MI GY ++G+
Sbjct: 223 HAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDA 282
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+GL ++ M + V P+ +TL SV+ A LV D + G+ VH + +G +V V L
Sbjct: 283 HEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATAL 342
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY+ EE +F RM KDVV+W +I + LP +++ ++ M + +PD
Sbjct: 343 VDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDA 402
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
IT+ VL+AC+ G L I LH +R G + +A L+D+YSKC ID A+ VF
Sbjct: 403 ITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEG 462
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
+K+++ W S+I G + EA+ +++M+ +++PNSVT VS+LSAC+ G + G
Sbjct: 463 TTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEG 522
Query: 519 KEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPA 553
+I ++ GV + +A++D+ R G ++ A
Sbjct: 523 IQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEA 558
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 246/461 (53%), Gaps = 23/461 (4%)
Query: 149 AWYVFGKMCDRDLFS---------WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
AWY G RDLF N L+ + +A + A+ L R+ V+ D +T
Sbjct: 46 AWYPPG--LARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLR----VRLDGFT 99
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGM 258
F +LR C +P L G+ VH IR + D V A++ MY +CGD+V A + +
Sbjct: 100 FSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVL 159
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDEK 315
K D + ++++GY +NG + L F ++ + V++ P +TL S +SA+ +G +
Sbjct: 160 EKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTP--VTLVSAMSAAAQLGHVR 217
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ H YV++ D+++ N ++ Y+ G+ + ++F M +DV++W+ MI Y
Sbjct: 218 KGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYV 277
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ + Y+ M P+ +T+ SVL ACA + + + G ++H++A+ G +
Sbjct: 278 QHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVG 337
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+A L+DMY KC C ++A+ +FH++P K+V++W ++I GL N E+L F+ M+L+
Sbjct: 338 VATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDD 397
Query: 496 K-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
P+++T+V +L+AC+ G +H + +R G + F+ ALLD+Y +CG + A
Sbjct: 398 HVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAV 457
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F + E+D+ W ++ GY G G A +++MI S
Sbjct: 458 RVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASS 498
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 4/306 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + L+ M + + + LV++++ C +EG +H V L V +
Sbjct: 279 HGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGV 338
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++K A +F +M +D+ +W +IGG + E+L +++ M
Sbjct: 339 ATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDH 398
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD T VL C + +H +++R G+ + V AL+ +Y KCGD+ A
Sbjct: 399 V-PDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAV 457
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+G ++D + W +MI+GY +G + + L+ M + P+ +T SV+SA G
Sbjct: 458 RVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSG 517
Query: 313 DEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-SWTTM 370
+ G ++ + ++ G + + ++ + G +E + M+ + V +W +
Sbjct: 518 LVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCAL 577
Query: 371 I-SCYE 375
+ +C E
Sbjct: 578 LAACRE 583
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARI 512
A ++F + P + +L + R + A I L ++ + T +L ACA +
Sbjct: 53 ARDLFDEFPSPTP-RLANALLRAHIRARQWRAAILLGPR-LRVRLDGFTFSLLLRACAAL 110
Query: 513 GALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNIL 570
+L G+ +HA A+R A D F+ A++ MY RCG M A N + E+ D+ +
Sbjct: 111 PSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSV 170
Query: 571 LTGYAERGQGALAEEFFRKMIDSKG 595
+TGY + G A EFF + + +G
Sbjct: 171 VTGYEQNGMAEEALEFFARNVVGQG 195
>gi|225466051|ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Vitis vinifera]
gi|296084180|emb|CBI24568.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 226/389 (58%), Gaps = 12/389 (3%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+LE L+ L + + I VD +L+ C + +D G+ +H ++ ++ SV L +
Sbjct: 59 ALEALLRDLQASIQDGITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSS 118
Query: 135 AFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
L ++ G + A +F +M +R F+WN LI GYA+ G +++A++LY +M G
Sbjct: 119 KLLRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQM-EEEG 177
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD +TFP VL+ CGG+ + G+EVH HV+R G+ D V+NAL+ MY KCGD+V+AR
Sbjct: 178 VVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKAR 237
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + RD +SWN+M++GY +G ++ L +F M + +PD + +S+V++ V
Sbjct: 238 KVFDKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVVTG---VP 294
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
KL ++HG+V++ G ++S+ N LI +Y + G ++ +F M +DVVSW ++IS
Sbjct: 295 SLKLAGQIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIIS 354
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--GL 430
+ + KA+ + M+ +PD +T S+LSACA LG + G L + MR G+
Sbjct: 355 AHRKDL---KAITYFSRMQKADVLPDVVTFVSLLSACAHLGLVKDGEGLFSM-MREDYGM 410
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
I + ++++Y + I++A E+ +
Sbjct: 411 IPSMEHYACMVNLYGRAGLIEEAYEIIEK 439
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 220/429 (51%), Gaps = 25/429 (5%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ D F +L TC + G +H + V + + L+ +Y G + A
Sbjct: 74 GITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSSKLLRLYASIGRIEEA 133
Query: 252 RLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+FD M +R+R +WN++ISGY E G Y + L+ M E V PD T V+ A
Sbjct: 134 HRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRVLKACG 193
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G +G EVH +V++ GF+DD V N L+ MY G+ + KVF ++ +D VSW +
Sbjct: 194 GIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCRDSVSWNS 253
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ Y LP +A+ ++ M G PD + I++V++ + +L L ++H +R G
Sbjct: 254 MLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVVTG---VPSLKLAGQIHGWVLRRG 310
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + IAN+LI +YS +D+A +F +P+++V+SW SII R + +A+ +F
Sbjct: 311 VQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHR---KDLKAITYFS 367
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDM 543
+M ++ P+ VT VS+LSACA +G + G+ + + +R G +P+ ++++
Sbjct: 368 RMQKADVLPDVVTFVSLLSACAHLGLVKDGEGLFS-MMREDY---GMIPSMEHYACMVNL 423
Query: 544 YVRCGRMKPAWNQFNSN---ERDVSAWNILLTG---YAERGQGALAEE-FFRKMIDSKGN 596
Y R G ++ A+ E + W LL + G +A E F D++ N
Sbjct: 424 YGRAGLIEEAYEIIEKRMEFEAGPTVWGALLYACYFHHNVDIGKIAAECLFELEPDNEHN 483
Query: 597 WRKLMGLFR 605
+ LM ++R
Sbjct: 484 FELLMNIYR 492
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 389 MMEAEGSMPDEITI-----ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ + + S+ D IT+ +S+L C L D GI++H+L + L + +++ L+ +
Sbjct: 64 LRDLQASIQDGITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSSKLLRL 123
Query: 444 YSKCKCIDKALEVFHQIPDKN--VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSV 500
Y+ I++A +F Q+ +N +W S+I G +A+ ++F+ + P+
Sbjct: 124 YASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRF 183
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T +L AC IG++ G+E+H H +R G A DGF+ NAL+DMY +CG + A F+
Sbjct: 184 TFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKI 243
Query: 561 E-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RD +WN +LTGY G A FR+M+
Sbjct: 244 VCRDSVSWNSMLTGYIRHGLPLQALSIFRRML 275
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 245/465 (52%), Gaps = 5/465 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V L + ++++ D A +VF R D++ WN L+ GY+K F + L +++R+
Sbjct: 39 VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL 98
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
PD +TFP V++ G + G+ +H V++ GY DV V ++L+ MY K
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA- 307
+ VFD MP+RD SWN +IS ++++GE K L LF M +P+ ++L+ ISA
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
S L+ E+ G+E+H +K GF D V + L+ MY E +VF +M K +V+W
Sbjct: 219 SRLLWLER-GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW 277
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+MI Y VE M EG+ P + T+ S+L AC+ NL G +H +R
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ + + I + +LID+Y KC + A VF + SW +I F+A+
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ +M+ + +KP+ VT S+L AC+++ AL GK+IH + D L +ALLDMY +
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG K A+ FNS ++DV +W ++++ Y GQ A F +M
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 234/444 (52%), Gaps = 5/444 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H++V K+ V + ++ + M+ KF ++ VF +M +RD+ SWN +I + +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G ++AL L+ RM G +P+ + + C + L+RGKE+H ++ G+E D
Sbjct: 186 SGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +AL+ MY KC L AR VF MP++ ++WN+MI GY G+ + + M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P TL+S++ A + G+ +HGYVI+ + D+ V LI +Y G E
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VFS+ + SW MIS Y KAVE Y M + G PD +T SVL AC+ L
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G ++H + L + ++ + L+DMYSKC +A +F+ IP K+V+SWT +I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ + EAL F +M LKP+ VTL+++LSAC G + G + + +R
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGI 543
Query: 533 DGFLPN--ALLDMYVRCGRMKPAW 554
+ + + ++D+ R GR+ A+
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAY 567
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 216/394 (54%), Gaps = 5/394 (1%)
Query: 203 VLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+LR C L+R K VH ++ G DV + +LI +Y C D AR VF+ R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 262 -DRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D WN+++SGY +N + L +F ++ + PD T +VI A +G E LGR
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H V+K G+ DV V + L+ MY F E +VF M +DV SW T+ISC+ S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+KA+E + ME+ G P+ +++ +SAC+ L L+ G ++H+ ++ G + +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
L+DMY KC C++ A EVF ++P K++++W S+I G S + +M++ +P+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
TL SIL AC+R L+ GK IH + +R V D ++ +L+D+Y +CG A F+
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 559 SNERDVS-AWNILLTGYAERGQGALAEEFFRKMI 591
++DV+ +WN++++ Y G A E + +M+
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 204/421 (48%), Gaps = 6/421 (1%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
S+QV + +A+ N + ++ +G E+AL+ M+ + +L + C
Sbjct: 161 SLQVFDEMPERDVASWN--TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+ G +H K L + +A + M+ K L A VF KM + L +WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I GY G + + RM + G +P T +L C +L GK +H +VIR
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
AD+ V +LI +Y KCG+ A VF K SWN MIS Y G + K + +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 286 FIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M V V PD +T +SV+ A S+L EK G+++H + + D + + L+ MY
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEK-GKQIHLSISESRLETDELLLSALLDMYS 456
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
GN +E ++F+ + KDVVSWT MIS Y P +A+ + M+ G PD +T+ +
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 405 VLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
VLSAC G +D G+K Q+ + G+ I + +ID+ + + +A E+ Q P+
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 464 N 464
+
Sbjct: 577 S 577
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 419 IKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLR 476
IKL HQ + GL +++ +LI++Y CK A VF + +V W S++ G
Sbjct: 23 IKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYS 82
Query: 477 LNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N+ + L F+++ LN P+S T +++ A +G G+ IH ++ G D
Sbjct: 83 KNSMFHDTLEVFKRL-LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ ++L+ MY + + + F+ ERDV++WN +++ + + G+ A E F +M
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 593 S 593
S
Sbjct: 202 S 202
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 163/538 (30%), Positives = 274/538 (50%), Gaps = 14/538 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+ E ++++ DS+ C+D A ++R C K +H + K S L + N
Sbjct: 32 TAESSVQWSDSVVP---CLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATN 88
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-V 193
L+ +VK G A +F +M +R+ S+ L GYA + + LY R+ G +
Sbjct: 89 ILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHEL 144
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P V+T L+ + + +H +++ GY+++ V ALI Y CG + AR
Sbjct: 145 NPHVFT--SFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARS 202
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+G+ +D + W ++S Y ENG + L L M P+ T + + AS +G
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ VHG ++K + D V L+++Y G+ + KVF+ M DVV W+ MI+
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + +KAV+ + M +P+E T++S+L+ CA LG +LH L ++ G
Sbjct: 323 FCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ ++N LID+Y+KC+ +D A+++F ++ KNV+SW ++I+G +AL FR+ +
Sbjct: 383 VYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALR 442
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N + VT S L ACA + ++ G ++H A++ A + N+L+DMY +CG +K
Sbjct: 443 NQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKV 502
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
A FN E DV++WN L++GY+ G G A F M D K N +G+ C
Sbjct: 503 AQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGC 560
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 245/482 (50%), Gaps = 17/482 (3%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+LHS + K + +G A ++ + G + A VF + +D+ W ++ Y + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F+++L L RM + G P+ YTF L+ G+ K VH +++ YE D V
Sbjct: 227 CFEDSLQLLSRM-GMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG 285
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
L+ +Y + GD+ A VF+ MPK D + W+ MI+ + +NG K + +FI MRE V
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVV 345
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ TLSS+++ + LG ++HG V+K+GF DV V N LI +Y + K+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKL 405
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F+ + SK+VVSW T+I YE KA+ ++ E+T +S L ACA L ++
Sbjct: 406 FAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG+++H LA++T + ++N+LIDMY+KC I A VF+++ +V SW ++I G
Sbjct: 466 ELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGY 525
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+ +AL F M + KPN +T + +LS C+ G + G++ + G
Sbjct: 526 STHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQD----CFESMICDHG 581
Query: 535 FLP-----NALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFF 587
P ++ ++ R G++ A N E V W +L+ + EEF
Sbjct: 582 IEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQ----YNEEFA 637
Query: 588 RK 589
R+
Sbjct: 638 RR 639
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 1/243 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
C NG +A+ M+E + +E L +++ C + G LH +V K L
Sbjct: 323 FCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + NA + ++ K + A +F ++ +++ SWN +I GY G +AL++++
Sbjct: 383 VYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREAL- 441
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V TF L C + ++ G +VH I+ V V N+LI MY KCGD+
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIK 501
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ VF+ M D SWNA+ISGY +G + L +F +M+ P+ +T V+S
Sbjct: 502 VAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCS 561
Query: 310 LVG 312
G
Sbjct: 562 NAG 564
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H + KT + V + N+ + M+ K GD+ A VF +M D+ SWN LI GY+
Sbjct: 468 GVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYST 527
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADV 232
G +AL ++ M KP+ TF VL C + +G++ +I G E +
Sbjct: 528 HGLGRQALRIFDIMKG-SDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCL 586
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
+ ++ ++ + G L +A + +G+P + W AM+S
Sbjct: 587 EHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 267/538 (49%), Gaps = 15/538 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L L + L +A ++L M + + V + L C R G LH +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + SV L N L M+ + L A +F +M + + S +I YA+ G D+A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G KP + +L++ L G+++H HVIR G ++ + ++ MYV
Sbjct: 172 FSGML-ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG LV A+ VFD M + ++ ++ GY + G L LF+ + V+ D S
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + LG+++H V K+G +VSV PL+ Y+ + E + F + +
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLH 422
VSW+ +IS Y ++AV+T++ + ++ S+ + T S+ AC+ L + ++G ++H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A++ LI + LI MYSKC C+D A EVF + + ++++WT+ I G +
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPN 538
EAL F KM+ +KPNSVT +++L+AC+ G + GK LR + D + +
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY--D 528
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG---YAERGQGALAEEFFRKM 590
++D+Y R G + A +F N E D +W L+G + G +A E R++
Sbjct: 529 CMIDIYARSGLLDEAL-KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 206/433 (47%), Gaps = 10/433 (2%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K +EA Q M GV Y++ C+ C + L G+ +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMD-KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-M 109
Query: 225 RFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
R G E V + N ++ MY +C L A +FD M + + +S MIS Y E G K +
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIK 341
LF M P ++++ + LV L GR++H +VI+ G + S+ ++
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKS--LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVN 227
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G ++VF +M K V+ T ++ Y + A++ + + EG D
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ VL ACA L L+LG ++H + GL S + + L+D Y KC + A F +I
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGK 519
+ N +SW++II G ++ EA+ F+ + NS T SI AC+ + G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++HA A++ + + +AL+ MY +CG + A F S + D+ AW ++G+A G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 579 QGALAEEFFRKMI 591
+ A F KM+
Sbjct: 468 NASEALRLFEKMV 480
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 226/440 (51%), Gaps = 6/440 (1%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M DR FSWN+ I YA+ G AL +++ M + GV PD + +L + DL +
Sbjct: 1 MADRSPFSWNLAIAEYARNGHHARALEIFRAMA-LEGVAPDRVSCIAILDAFASLGDLSQ 59
Query: 216 GKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ H V G +DV V A++TMY +CG + AR FD M R+ +SW+AMI+ Y
Sbjct: 60 GEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYA 119
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDV 333
+ G L LF+ M V + +T SV+ A + LG+ +H ++ G DDV
Sbjct: 120 QRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDV 179
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ N ++ MY G + +VF RME+K+ V+W TMI+ +A M+ +
Sbjct: 180 ILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLD 239
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G P++IT+ SV+ ACA + ++ G +H++ GL S +AN L+++Y KC + A
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
I ++ ISWT+++ + A+ ++M +K +S T V++L +C I
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNIL 570
AL G+EIH G+ D L AL+DMY +CG A F+ S+ RDV+ WN L
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419
Query: 571 LTGYAERGQGALAEEFFRKM 590
L Y R QG F +M
Sbjct: 420 LAAYVLRDQGKETLGIFARM 439
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 265/549 (48%), Gaps = 23/549 (4%)
Query: 58 IATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
+A ++P N + E NG +AL+ +M + D + + ++ +G
Sbjct: 1 MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60
Query: 115 LYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+ H V + S V + A L+M+ + G + HA F M R++ SW+ +I YA+
Sbjct: 61 EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G +AL L+ RM GVK + TF VL C + + GK +H ++ G D D
Sbjct: 121 RGHPGDALELFVRMDH-EGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGD-D 178
Query: 234 VV--NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V+ N ++ MY KCG++ AR VF+ M ++ ++WN MI+ + Y + L M
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDL 238
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ +TL SVI A + GR VH V G D +V N L+ +Y G
Sbjct: 239 DGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRA 298
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+E++D +SWTT+++ Y +A+ + M+ EG D T ++L +C
Sbjct: 299 ARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVA 358
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTS 470
+ L LG ++H +G+ ++ L+DMY KC D A F ++ D ++V W +
Sbjct: 359 IAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNA 418
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL--- 526
++ L ++ E L F +M L + P++VT +SIL ACA + AL G+ H+ L
Sbjct: 419 LLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERG 478
Query: 527 ---RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER----DVSAWNILLTGYAERGQ 579
R VA L ++++MY +CG + A +F R DV AW+ ++ Y++ G
Sbjct: 479 LFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFG- 537
Query: 580 GALAEEFFR 588
L+EE R
Sbjct: 538 --LSEEALR 544
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 187/396 (47%), Gaps = 23/396 (5%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+++ C W + G +H +V+ + NA ++++ K G L A + +
Sbjct: 248 LVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIE 307
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD SW L+ YA+ G A+++ +RM GVK D +TF +L +C + L G+
Sbjct: 308 TRDKISWTTLLAAYARHGHGKRAIAVIKRMDH-EGVKLDSFTFVNLLESCVAIAALALGE 366
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFEN 276
E+H + G E D + AL+ MY KCG+ AR FD M RD WNA+++ Y
Sbjct: 367 EIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLR 426
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L +F M V PD +T S++ A + LGR H +++ G D +V
Sbjct: 427 DQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVA 486
Query: 337 NP------LIKMYLSFGNREEGEKVFS---RMESKDVVSWTTMISCYEGSVLPDKAVETY 387
+ +I MY G+ + + F+ R + DVV+W+ M++ Y L ++A+ +
Sbjct: 487 SADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCF 546
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT------LI 441
M+ EG PD ++ S ++ C+ G+ +A T L IA T L+
Sbjct: 547 YSMQQEGVKPDSVSFVSAIAGCS-----HSGLVREAVAFFTSLRHDHGIAPTEAHFACLV 601
Query: 442 DMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLR 476
D+ S+ I +A + + P + +W +++ R
Sbjct: 602 DLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACR 637
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 241/464 (51%), Gaps = 14/464 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L + G L A VF ++ D ++N LI Y+ G F A+ LY+ M + V P+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR-VPPN 98
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTFP VL+ C + DL G+ +H H G D+ V ALI +Y++C A VF
Sbjct: 99 KYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEK 315
MP RD ++WNAM++GY +G Y + + M++ + P+ TL S++ G
Sbjct: 159 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218
Query: 316 LGREVHGYVIKMGF---SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G VH Y ++ + V + L+ MY + +VF M ++ V+W+ +I
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 373 CYEGSVLPDKAVETYQM---MEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
G VL D+ E + + M EG ++AS L CA L +L +G +LH L ++
Sbjct: 279 ---GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G+ + + N+L+ MY+K I++A +F +I K+ IS+ +++ G N ++ EA + F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM N++P+ T+VS++ AC+ + AL G+ H + G+A + + N+L+DMY +C
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKC 455
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ + F+ RD+ +WN ++ GY G G A F M
Sbjct: 456 GRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSM 499
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 241/510 (47%), Gaps = 22/510 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + G A+ SM + ++ +++ C G +H+ +
Sbjct: 68 NALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAA 127
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H + + A + ++++ G A VF KM RD+ +WN ++ GYA G + A++
Sbjct: 128 VGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAH 187
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY----EADVDVVNALI 239
M GG++P+ T +L L +G VH + +R Y E V + AL+
Sbjct: 188 LLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR-AYLDQNEEQVLIGTALL 246
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD-F 298
MY KC LV A VF GM R+ ++W+A+I G+ + LF +++LV+ F
Sbjct: 247 DMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLF---KDMLVEGMCF 303
Query: 299 MTLSSVISASEL---VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
++ +SV SA + + D ++G ++H + K G D++ N L+ MY G E +
Sbjct: 304 LSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATML 363
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + KD +S+ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L
Sbjct: 364 FDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAAL 423
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G H + GL I N+LIDMY+KC ID + +VF ++P ++++SW ++I G
Sbjct: 424 QHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGY 483
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
++ EA F M +P+ VT + +++AC+ G + GK H G
Sbjct: 484 GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGK----HWFDTMTHKYG 539
Query: 535 FLPN-----ALLDMYVRCGRMKPAWNQFNS 559
LP ++D+ R G + A+ S
Sbjct: 540 ILPRMEHYICMVDLLARGGFLDEAYQFIQS 569
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 203/405 (50%), Gaps = 5/405 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ L +G A+ +L MQ+ + + LV+L+ L +G +H+
Sbjct: 169 NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCL 228
Query: 123 KT---MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ + V +G A L M+ K L +A VF M R+ +W+ LIGG+ E
Sbjct: 229 RAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTE 288
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A +L++ M G + LR C + DL+ G ++H + + G AD+ N+L+
Sbjct: 289 AFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLL 348
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+MY K G + A ++FD + +D IS+ A++SGY +NG+ + ++F M+ V PD
Sbjct: 349 SMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIA 408
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I A + + GR HG VI G + + S+CN LI MY G + +VF +M
Sbjct: 409 TMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKM 468
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++D+VSW TMI+ Y L +A + M+ +G PD++T +++AC+ G + G
Sbjct: 469 PARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGK 528
Query: 420 K-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ + G++ + ++D+ ++ +D+A + +P K
Sbjct: 529 HWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLK 573
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 245/462 (53%), Gaps = 11/462 (2%)
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ FG L HA +F + RDL+ + V+I Y +SLY+ M P Y
Sbjct: 75 YASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYV 134
Query: 200 -FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F V ++C D + H H ++ +D V+ L+ Y K + A FD +
Sbjct: 135 LFSIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEI 193
Query: 259 PKRDRI-SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ D + SW +MI Y +N +GL LF MRE VD + T+ S++SA + G
Sbjct: 194 HENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQG 253
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES----KDVVSWTTMISC 373
+ VHG+VIK G + + L+ MY+ GN ++ KVF S +D+VSWT MI
Sbjct: 254 KWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVG 313
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y P A+E ++ + G +P+ +T++S+LS+CA LGN +G LH LA++ GL +
Sbjct: 314 YSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDDH 373
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ N L+DMY+KC + A VF + +K+V+SW SII G + ++EAL FR+M L
Sbjct: 374 -PVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGL 432
Query: 494 NL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMK 551
L P++VT+V ILSACA +G L G +H AL+ G+ ++ ALL+ Y +CG +
Sbjct: 433 ELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDAR 492
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
A F+S E++ W ++ GY +G G + FR M++
Sbjct: 493 AARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLE 534
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 233/467 (49%), Gaps = 20/467 (4%)
Query: 140 FVKFGDLGHAWYVFGKMCDRD-LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ KF + A F ++ + D + SW +I Y + E L+L+ RM V + +
Sbjct: 177 YAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRM-REAFVDGNEF 235
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T ++ C + L +GK VH VI+ G + + +L+ MYVKCG++ A VFD
Sbjct: 236 TVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDES 295
Query: 259 PK----RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
RD +SW AMI GY + G L LF + + P+ +T+SS++S+ +G+
Sbjct: 296 SSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNS 355
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+G+ +HG +K G DD V N L+ MY G + VF M KDVVSW ++IS +
Sbjct: 356 VMGKLLHGLAVKCGL-DDHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGF 414
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI-SY 433
S +A+ ++ M E PD +T+ +LSACA LG L LG +H LA++ GL+ S
Sbjct: 415 VQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSS 474
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + L++ Y+KC A VF + +KN ++W ++I G + +L FR M+
Sbjct: 475 IYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLE 534
Query: 494 NL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRC 547
L +PN V +IL+AC+ G M G+ L G F+P+ ++DM R
Sbjct: 535 ELVEPNEVVFTTILAACSHSG--MVGEGSRLFNLMCGEL--NFVPSMKHYACMVDMLARA 590
Query: 548 GRMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G ++ A + + + VS + L G + L +KM++
Sbjct: 591 GNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLE 637
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 219/442 (49%), Gaps = 10/442 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + L + M+E + +E + +LV C +G ++H V K ++ L
Sbjct: 212 NDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYL 271
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMC----DRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ L+M+VK G++ A VF + DRDL SW +I GY++ G+ AL L++
Sbjct: 272 TTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKK 331
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
W G+ P+ T +L +C + + GK +H ++ G + D V NAL+ MY KCG +
Sbjct: 332 W-SGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVV 389
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VF+ M ++D +SWN++ISG+ ++GE + L LF M L PD +T+ ++SA
Sbjct: 390 SDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSAC 449
Query: 309 ELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G LG VHG +K G + V L+ Y G+ VF M K+ V+W
Sbjct: 450 ASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTW 509
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM- 426
MI Y + ++ ++ M E P+E+ ++L+AC+ G + G +L L
Sbjct: 510 GAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCG 569
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNRSFEAL 485
+ + ++DM ++ +++AL+ ++P + +S + + + G L++R FE
Sbjct: 570 ELNFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSR-FELG 628
Query: 486 IFFRKMMLNLKPNSVTLVSILS 507
K ML L P+ ++S
Sbjct: 629 GAAIKKMLELHPDEACYYVLVS 650
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 197/395 (49%), Gaps = 14/395 (3%)
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
R C +P LK +H + G D+ + L+++Y G L AR +F+ +P RD
Sbjct: 41 RLCTNLPSLK---TLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLY 97
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVL--VDPDFMTLSSVISASELVGDEKLGREVHG 322
+ MI YF N + L+ +MR L D++ S V + D + H
Sbjct: 98 CFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHC 157
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPD 381
+ +K D V L+ Y F +E + F + E+ DVVSWT+MI Y +
Sbjct: 158 HFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAR 216
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ + + M +E T+ S++SAC L L G +H ++ G+ + +L+
Sbjct: 217 EGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLL 276
Query: 442 DMYSKCKCIDKALEVFHQIP----DKNVISWTSIILGLRLNNRSFEALIFFR-KMMLNLK 496
+MY KC I A +VF + D++++SWT++I+G AL F+ K +
Sbjct: 277 NMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGIL 336
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PNSVT+ S+LS+CA++G + GK +H A++ G+ D + NAL+DMY +CG + A
Sbjct: 337 PNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDARCV 395
Query: 557 FNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + E+DV +WN +++G+ + G+ A FR+M
Sbjct: 396 FEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRM 430
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 239/454 (52%), Gaps = 13/454 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A VF + FSWN+++G Y G D+AL L+++M V G++ D
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF C V L+ GK+ H + G E+ + + +AL+ MY +CG AR +FD +
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P ++ + WN MI+ Y +NG + + L L+ M + PD +T +V+ A L + GR
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACTL----ESGR 173
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H V+ G D V N L+ M+ G+ + ++VF R+ +DV+SW ++S Y
Sbjct: 174 LIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQG 233
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+A E ++ M+ G P+ +T S+L AC+ L L ++HQ GL + N
Sbjct: 234 HRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLR---EIHQELADQGLEQDEQVGN 290
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
TLI Y+K ++ ++ VF ++ ++V+SWT +I+G+ + AL +R+M++ ++P
Sbjct: 291 TLITAYNKFS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++V LV L AC + L G++IH + D F+ A+++MY +CG+ A F
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
V+ WN L+ YA+ G A + + +M
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERM 443
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 256/517 (49%), Gaps = 21/517 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N L C NGS +QAL+ M +++ I D V C +EG HS
Sbjct: 27 NLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVTFVTAATACSLVGSLEEGKQFHSRFV 86
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ S+ L +A ++M+ + G A +F ++ +++ WNV+I YA+ G F EAL
Sbjct: 87 ESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEALE 146
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
LY M +KPD TF VL C L+ G+ +H V+ G E D V NAL+ M+
Sbjct: 147 LYYDM----NLKPDRVTFLNVLHAC----TLESGRLIHQDVVSAGLERDKFVGNALVNMF 198
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG L A+ VFD + RD ISWNA++S Y + G + LF M + + P+ +T
Sbjct: 199 GKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMDKAGLQPNSVTYL 258
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S++ A + E+L RE+H + G D V N LI Y F + E+ VF RM+ +
Sbjct: 259 SLLPACSSL--EQL-REIHQELADQGLEQDEQVGNTLITAYNKF-SLEDSVAVFERMKRR 314
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
VVSWT MI +A++ Y+ M EG PD + + L AC + NL G K+H
Sbjct: 315 SVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIH 374
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+L T +++ + +A +++MY KC +A VF + V +W S+I + +
Sbjct: 375 RLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGHAT 434
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL---RIGVAFDGFLPN 538
+AL + +M L+ +P+ VTL+ L AC+ +G L +E ++ + ++ F
Sbjct: 435 DALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVEDYQVEAVPAHF--G 492
Query: 539 ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
L+D++ R G + A S +SAW LL
Sbjct: 493 CLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNA 529
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 173/353 (49%), Gaps = 12/353 (3%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFM 299
MY KCG + AR VF+ + + SWN M+ Y NG + L LF M +V + D +
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T + +A LVG + G++ H ++ G + + + L+ MY G+ EE K+F R+
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+VV W MI+ Y + +A+E Y M + PD +T +VL AC L+ G
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDMNLK---PDRVTFLNVLHAC----TLESGR 173
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+HQ + GL + N L++M+ KC + A VF +I ++VISW +++
Sbjct: 174 LIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQG 233
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA F++M L+PNSVT +S+L AC+ + L +EIH G+ D + N
Sbjct: 234 HRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQL---REIHQELADQGLEQDEQVGN 290
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
L+ Y + R V +W ++ G E G G A + +R+M+
Sbjct: 291 TLITAYNKFSLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMV 343
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 200/415 (48%), Gaps = 26/415 (6%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG +AL+ Y D +N+ D +N++ C + G L VVS +
Sbjct: 138 NGHFSEALELYYD----MNLKPDRVTFLNVLHACTLESGR---LIHQDVVSAGLERDKF- 189
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GNA ++MF K G L A VF ++ RD+ SWN L+ Y + G EA L++RM
Sbjct: 190 VGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMD-KA 248
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P+ T+ +L C + L+ E+H + G E D V N LIT Y K L +
Sbjct: 249 GLQPNSVTYLSLLPACSSLEQLR---EIHQELADQGLEQDEQVGNTLITAYNKF-SLEDS 304
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M +R +SW MI G E+G + L L+ M V PD + L + A V
Sbjct: 305 VAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSV 364
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR++H V DV V ++ MY G E E VF M++ V +W ++I
Sbjct: 365 ENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLI 424
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y A++ Y+ ME G+ PD +T+ L AC+ LG LD + + +G++
Sbjct: 425 GAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFY-----SGMV 479
Query: 432 S-YIIIA-----NTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNN 479
Y + A L+D++ + ID+A E+ +P + IS WT+++ + +N
Sbjct: 480 EDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNACKAHN 534
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 543 MYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMIDSKG 595
MY +CG ++ A FNS +R +WN++L Y G G A E F++M+D G
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHG 54
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 258/529 (48%), Gaps = 11/529 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL--YLHSVVSKTMSH 127
L NG LE+AL Y M+ I + +A +V LC GL + H +VS
Sbjct: 120 LSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQ 179
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+SV N+ +SM G + A +F +M +RD SWN L+ Y+ G ++ ++ M
Sbjct: 180 VSV--ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDM 237
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G ++ D T ++ C + G VH +R G + + VVNAL+ MY G
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L A +F M +RD ISWN MIS Y +NG M L + PD MT SS + A
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G GR VH +++ ++ V N LI MY + E+ E++F M + DVVS
Sbjct: 358 CSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC 417
Query: 368 TTMISCYEGSVLPD--KAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQL 424
+I Y +VL D KA++ + M + ITI ++L + +L + G+ LH
Sbjct: 418 NILIGSY--AVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAY 475
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ G +S ++N+LI MY+KC ++ + VF +I +++V+SW ++I + E+
Sbjct: 476 TIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEES 535
Query: 485 LIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F M + + + L +S+ A + +L G ++H L+ G+ D + NA +DM
Sbjct: 536 LKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDM 595
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
Y +CG+M + R WN L++GYA G AEE F+ MI
Sbjct: 596 YGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMI 644
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 253/522 (48%), Gaps = 6/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVSKTMSHLSVRL 132
G A L M+E + + AL +LV CE W+ G G +H++ K ++V +
Sbjct: 22 GRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYI 81
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A L ++ + A +F +M +R++ SW L+ + G +EAL Y+RM
Sbjct: 82 GTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMR-RER 140
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ + F V+ CG + D G +V HVI G + V V N+LI+M G + A
Sbjct: 141 IACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAE 200
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-VLVDPDFMTLSSVISASELV 311
+F M +RD +SWNA++S Y G K +F MR L+ D TL S+IS
Sbjct: 201 KLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASS 260
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G VH ++ G + V N L+ MY S G + E +F M +D++SW TMI
Sbjct: 261 DYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMI 320
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + A++T + PD +T +S L AC+ G L G +H + ++ L
Sbjct: 321 SSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLH 380
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRK 490
+++ N+LI MY KC I+ A +F +P+ +V+S +I + +A+ +FF
Sbjct: 381 HNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWM 440
Query: 491 MMLNLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+K N +T+V+IL + L G +HA+ + G D ++ N+L+ MY +CG
Sbjct: 441 RRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGD 500
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ + N F R V +WN ++ + G G + + F M
Sbjct: 501 LESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDM 542
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 208/429 (48%), Gaps = 5/429 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHV 221
SW I G + G A S+ + M GV + ++ C + + G +H
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMR-ERGVPLSGFALASLVTACERWEEGRACGAAIHA 68
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+ G +V + AL+ +Y ++ A+ +F MP+R+ +SW A++ NG +
Sbjct: 69 LTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEE 128
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L + MR + + ++V+S + DE G +V +VI G VSV N LI
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEI 400
M + G + EK+F RME +D VSW ++S Y L K+ + M G + D
Sbjct: 189 MLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ S++S CA + G +H L +RTGL SYI + N L++MYS + A +F +
Sbjct: 249 TLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNM 308
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
+++ISW ++I N + +AL +++ N P+ +T S L AC+ GALM G+
Sbjct: 309 SRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGR 368
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERG 578
+HA L++ + + + N+L+ MY +C ++ A F DV + NIL+ YA
Sbjct: 369 MVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLE 428
Query: 579 QGALAEEFF 587
G A + F
Sbjct: 429 DGTKAMQVF 437
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 176/359 (49%), Gaps = 6/359 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG+ ALK L + N D + + C +G +H++ +
Sbjct: 317 NTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQ 376
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H ++ +GN+ ++M+ K + A +F M + D+ S N+LIG YA ++
Sbjct: 377 LSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA---VLEDGTKA 433
Query: 184 YQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALIT 240
Q FW+ G VK + T +L + DL+ G +H + I G+ +D V N+LIT
Sbjct: 434 MQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLIT 493
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCGDL + VF + R +SWNAMI+ ++G + L LF+ MR D +
Sbjct: 494 MYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHIC 553
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L+ +S+S + + G ++HG +K G +D V N + MY G +E K+
Sbjct: 554 LAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPA 613
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ W T+IS Y +A ET++ M + G PD +T ++LSAC+ G +D GI
Sbjct: 614 IRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGI 672
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 249/492 (50%), Gaps = 46/492 (9%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN ++ G+A + AL +Y RM +G + P+ Y+FP
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPF 69
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFG---------------------------YEA----D 231
+L++C + G+++H V++ G ++A D
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V ALIT Y GD AR VFD + +RD +SWNAMI+GY ENG Y + L LF M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM----GFSDDVSVCNPLIKMYLSFG 347
V PD TL SV+SA G +LGR+VH +V GFS + + N LI +Y G
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E +F + KDVVSW T+I Y + L +A+ +Q M G P+++T+ SVL
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 408 ACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
ACA LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ + +++
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH-- 522
SW ++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G++I
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429
Query: 523 -AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQ 579
+ + + ++D+ G K A ++ E D W LL + G
Sbjct: 430 MTQDYNLTPKLEHY--GCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN 487
Query: 580 GALAEEFFRKMI 591
LAE F +K+I
Sbjct: 488 LELAESFAQKLI 499
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 199/396 (50%), Gaps = 13/396 (3%)
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
SH V A ++ + GD A VF ++ +RD+ SWN +I GY + G ++EAL L++
Sbjct: 126 SHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFK 185
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV----IRFGYEADVDVVNALITM 241
M V+PD T V+ C ++ G++VH V G+ + + +VNALI +
Sbjct: 186 EMMRT-NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDL 244
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A +F+G+ +D +SWN +I GY Y + L+LF M P+ +TL
Sbjct: 245 YSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTL 304
Query: 302 SSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV+ A +G +GR +H Y+ K G +++ S+ LI MY G+ E +VF+ M
Sbjct: 305 LSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM 364
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ + SW MI + + A + + M PD+IT +LSAC+ G LDLG
Sbjct: 365 LYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGR 424
Query: 420 KLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
++ + + L + +ID+ +A E+ H +P + + + W S++ +
Sbjct: 425 QIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACK- 483
Query: 478 NNRSFEALIFFRKMMLNLKPN---SVTLVSILSACA 510
+ + E F + ++ ++P S L+S + A A
Sbjct: 484 KHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATA 519
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 43/375 (11%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSH---L 128
NG E+AL+ M N+ DE LV++V C + G +HS V H
Sbjct: 174 NGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSS 233
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S+++ NA + ++ K GD+ A+ +F + +D+ SWN LIGGY + EAL L+Q M
Sbjct: 234 SLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML 293
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCG 246
G DV T VL C + + G+ +HV++ + G + + +LI MY KCG
Sbjct: 294 RSGECPNDV-TLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCG 352
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ A VF+ M R SWNAMI G+ +G LF MR V+PD +T ++S
Sbjct: 353 DIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLS 412
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A G LGR++ F + + + ++E
Sbjct: 413 ACSHSGLLDLGRQI-------------------------FKSMTQDYNLTPKLE-----H 442
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ MI S L +A E M E PD + S+L AC GNL+L Q +
Sbjct: 443 YGCMIDLLGHSGLFKEAEEMIHTMPME---PDGVIWCSLLKACKKHGNLELAESFAQKLI 499
Query: 427 R---TGLISYIIIAN 438
+ SY++++N
Sbjct: 500 KIEPENSGSYVLLSN 514
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 39/277 (14%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF ++ +++ W TM+ + S P A+E Y M + G +P+ + +L +CA
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSK---------------------CKCI--- 450
+ G ++H ++ G + +LI MY++ C +
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139
Query: 451 -------DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
A +VF +I +++V+SW ++I G N R EAL F++MM N++P+ TL
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGF-----LPNALLDMYVRCGRMKPAWNQF 557
VS++SACA+ G++ G+++H+ + GF + NAL+D+Y +CG ++ A+ F
Sbjct: 200 VSVVSACAQSGSIELGRQVHS-WVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ +DV +WN L+ GY A F++M+ S
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRS 295
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACAR 511
A+ VF I + N++ W +++ G ++ AL ++ R + L PNS + +L +CA+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNIL 570
A G++IHA L++G D ++ +L+ MY R G ++ A F+ S+ RDV + L
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 571 LTGYAERGQGALAEEFFRKMID 592
+TGYA RG A + F ++ +
Sbjct: 137 ITGYASRGDFRSARKVFDEITE 158
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 249/471 (52%), Gaps = 3/471 (0%)
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ M H + N +S +VK G+LG A +F M +R +W +LIGGY++ F EA
Sbjct: 76 EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 135
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ +M G +PD TF +L C G + +V +I+ GY++ + V N L+ Y
Sbjct: 136 LFVQM-QRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSY 194
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K L A +F MP+ D +S+NAMI+GY ++G K + LF+ M+ + P T +
Sbjct: 195 CKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFA 254
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+V+ A+ + D LG+++H +VIK F +V V N L+ Y + + K+F M +
Sbjct: 255 AVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 314
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VS+ +IS Y A + ++ ++ + A++LS + + ++G ++H
Sbjct: 315 DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH 374
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ T S I++ N+L+DMY+KC ++A +F + ++ + WT++I
Sbjct: 375 AQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434
Query: 483 EALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
E L F KM ++ + T S+L A A I +L GK++H+ ++ G + F +ALL
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D+Y +CG +K A F +R++ +WN +++ YA+ G+ + F++M+
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 545
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 250/474 (52%), Gaps = 12/474 (2%)
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM-----SHLSVRLGNAFLSMFVK 142
++ C E V V L G++ G + V ++ + S L V GN + + K
Sbjct: 139 QMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIV--GNTLVDSYCK 196
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
L A +F +M + D S+N +I GY+K G ++A++L+ M G+KP +TF
Sbjct: 197 SNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM-QNSGLKPTEFTFAA 255
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL G+ D+ G+++H VI+ + +V V NAL+ Y K ++ AR +FD MP++D
Sbjct: 256 VLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 315
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+S+N +ISGY +G++ LF ++ D ++++S + D ++GR++H
Sbjct: 316 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 375
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
I ++ V N L+ MY G EE E +F+ + + V WT MIS Y ++
Sbjct: 376 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEE 435
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
++ + M + D+ T AS+L A A + +L LG +LH +++G +S + + L+D
Sbjct: 436 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 495
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
+Y+KC I A++ F ++PD+N++SW ++I N + L F++M+L+ L+P+SV+
Sbjct: 496 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 555
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPA 553
+ +LSAC+ G + G H +++ D + +++DM R GR A
Sbjct: 556 FLGVLSACSHSGLVEEGL-WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEA 608
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 193/373 (51%), Gaps = 15/373 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS V KT +V + NA L + K + A +F +M ++D S+NV+I GYA
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAW 328
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G A L++ + + + + F +L D + G+++H I ++++
Sbjct: 329 DGKHKYAFDLFRELQFTAFDRKQ-FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KCG A ++F + R + W AMIS Y + G Y +GL LF MR+
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V D T +S++ AS + LG+++H ++IK GF +V + L+ +Y G+ ++
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ F M +++VSW MIS Y + + +++++ M G PD ++ VLSAC+ G
Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567
Query: 414 NLDLGI-------KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNV 465
++ G+ ++++L R + +++DM + ++A ++ ++P D +
Sbjct: 568 LVEEGLWHFNSMTQIYKLDPRREHYA------SVVDMLCRSGRFNEAEKLMAEMPIDPDE 621
Query: 466 ISWTSIILGLRLN 478
I W+S++ R++
Sbjct: 622 IMWSSVLNACRIH 634
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 204/442 (46%), Gaps = 45/442 (10%)
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRG--KEVHVHVIRFGYEADVDVVNALITMYVK 244
+ WV +K +V TF + + P L+ + +++ G++ D N + ++K
Sbjct: 9 LLWV--MKKNVSTF--LKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLK 64
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENG--------------------------- 277
G+L +AR +F+ MP ++ +S N MISGY ++G
Sbjct: 65 NGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGY 124
Query: 278 ----EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR---EVHGYVIKMGFS 330
++ + LF+ M+ +PD++T +++S ++G +V +IK+G+
Sbjct: 125 SQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG---CNGHEMGNQITQVQTQIIKLGYD 181
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ V N L+ Y + ++F M D VS+ MI+ Y L +KAV + M
Sbjct: 182 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM 241
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ G P E T A+VL A L ++ LG ++H ++T + + ++N L+D YSK +
Sbjct: 242 QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 301
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A ++F ++P+++ +S+ II G + + A FR++ ++LS
Sbjct: 302 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIA 361
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWN 568
+ G++IHA + + + N+L+DMY +CG+ + A F N R W
Sbjct: 362 SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWT 421
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
+++ Y ++G + F KM
Sbjct: 422 AMISAYVQKGFYEEGLQLFNKM 443
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 34/291 (11%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ L+ + M++ ++ D+ +L+R G LHS + K+ +V G
Sbjct: 431 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG 490
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A L ++ K G + A F +M DR++ SWN +I YA+ G + L ++ M + G+
Sbjct: 491 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV-LSGL 549
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD +F VL C ++ G H + + Y+ D
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGL-WHFNSMTQIYKLD---------------------- 586
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
P+R+ + +++ +G + + L M E+ +DPD + SSV++A + +
Sbjct: 587 -----PRREH--YASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLNACRIHKN 636
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++L R + M D + + +Y + G E KV M + V
Sbjct: 637 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 687
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 244/457 (53%), Gaps = 15/457 (3%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
GDL A ++F ++ + +N LI Y+ G AL LY+ + +P+ YTFP V
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGP-ALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C + DL+ + VH H R G AD+ V AL+ +Y KC A VF MP RD
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
++WNAM++GY +G+Y + ++M++ P+ TL +++ G GR VH Y
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 324 VIKM----GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
++ D V V L+ MY G+ +VF M ++ V+W+ ++ G VL
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVG---GFVL 311
Query: 380 PDKAVETYQM---MEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ +E + + M A+G ++AS L ACA L +L LG +LH L ++GL + +
Sbjct: 312 CGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLT 371
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
N+L+ MY+K ID+A +F Q+ K+ +S+++++ G N ++ EA FRKM N
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P+ T+VS++ AC+ + AL GK H + G+A + + NAL+DMY +CGR+ +
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSR 491
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ RD+ +WN ++ GY G G A F M
Sbjct: 492 QIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDM 528
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 230/466 (49%), Gaps = 15/466 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H ++ H + + A + ++ K HA VF +M RD+ +WN ++ GYA G
Sbjct: 151 VHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGK 210
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR----FGYEADV 232
+ + ++ + P+ T +L L +G+ VH + +R ++ V
Sbjct: 211 YSDTIACL--LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGV 268
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMRE 291
V AL+ MY KCG LV A VF+ M R+ ++W+A++ G+ G ++ LF M+ +
Sbjct: 269 LVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQ 328
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
L +++S + A + D LG+++H + K G D++ N L+ MY G ++
Sbjct: 329 GLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQ 388
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F +M KD VS++ ++S Y + D+A ++ M+A PD T+ S++ AC+
Sbjct: 389 ATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSH 448
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L G H + G+ S I N LIDMY+KC ID + ++F +P ++++SW ++
Sbjct: 449 LAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTM 508
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK---EIHAHALR 527
I G ++ EA F M +P+ VT + ++SAC+ G + GK + AH
Sbjct: 509 IAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYG 568
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILL 571
I + ++ ++D+ R G + A+ Q + DV W LL
Sbjct: 569 ITPRMEHYI--GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 226/458 (49%), Gaps = 12/458 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L+G + L MQ+ + + LV L+ L +G +H+ +
Sbjct: 199 NAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVR 257
Query: 124 TMS----HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
S V +G A L M+ K G L +A VF M R+ +W+ L+GG+ G E
Sbjct: 258 ACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLE 317
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A SL++ M G + LR C + DL GK++H + + G D+ N+L+
Sbjct: 318 AFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLL 377
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+MY K G + +A +FD M +D +S++A++SGY +NG+ + +F M+ V PD
Sbjct: 378 SMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVA 437
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I A + + G+ HG VI G + + S+CN LI MY G + ++F M
Sbjct: 438 TMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVM 497
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++D+VSW TMI+ Y L +A + M+ + PD++T ++SAC+ G + G
Sbjct: 498 PARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGK 557
Query: 420 K-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ H +A + G+ + ++D+ ++ +D+A + +P K +V W +++ R+
Sbjct: 558 RWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRV 617
Query: 478 NNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ + M+ L P N V L +I SA R
Sbjct: 618 -HKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGR 654
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 12/355 (3%)
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CGDL AR +FD +P +NA+I Y G + + + R L P+ T V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A + D + R VH + + G D+ V L+ +Y + VF RM ++DV
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
V+W M++ Y + +M+ + + P+ T+ ++L A G L G +H
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 425 AMRTGLI----SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
++R + +++ L+DMY+KC + A VF + +N ++W++++ G L R
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 481 SFEALIFFRKMMLN----LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
EA F+ M+ L P SV S L ACA + L GK++HA + G+ D
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372
Query: 537 PNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N+LL MY + G + A F+ +D +++ L++GY + G+ A FRKM
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 263/521 (50%), Gaps = 30/521 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL M L + +E ++++ C + G +H VV + V +
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N + M+ K + + +F ++ +R++ SWN L Y + F EA+ L+ M + G
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMV-LSG 253
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ ++ ++ C G+ D RGK +H ++I+ GY+ D NAL+ MY K GDL A
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + + D +SWNA+I+G + + + L EL+G
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL-------------------------ELLG 348
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K R++H ++KM D+ V L+ MY E+ F+ + KD+++W +IS
Sbjct: 349 QMK--RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 406
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ + M EG ++ T++++L + A L + + ++H L++++G S
Sbjct: 407 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 466
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + N+LID Y KC ++ A +F + +++S+TS+I + EAL F +M
Sbjct: 467 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 526
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ LKP+ S+L+ACA + A GK++H H L+ G D F N+L++MY +CG +
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 586
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F+ ER + +W+ ++ G A+ G G A + F +M+
Sbjct: 587 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 627
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 255/494 (51%), Gaps = 30/494 (6%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L+ C + GL +H+ ++K+ + N ++++ K G+A + + + D
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD 121
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SW+ LI GYA+ G AL + M + GVK + +TF VL+ C V DL+ GK+VH
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLL-GVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V+ G+E DV V N L+ MY KC + + ++ +FD +P+R+ +SWNA+ S Y +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCG 240
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + LF M + P+ +LSS+++A + D G+ +HGY+IK+G+ D N L+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ + VF +++ D+VSW +I+ G VL + Q +E G M +
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIA---GCVLHE---HHEQALELLGQMKRQ- 353
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
LH M+ + S + ++ L+DMYSKC ++ A F+ +
Sbjct: 354 --------------------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 393
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P+K++I+W +II G EAL F +M + N TL +IL + A + + +
Sbjct: 394 PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCR 453
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++H +++ G D ++ N+L+D Y +C ++ A F D+ ++ ++T YA+ G
Sbjct: 454 QVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYG 513
Query: 579 QGALAEEFFRKMID 592
QG A + F +M D
Sbjct: 514 QGEEALKLFLEMQD 527
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 242/486 (49%), Gaps = 40/486 (8%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E +L ++V C R G +H + K NA + M+ K GDL A VF
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVF 316
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
K+ D+ SWN +I G ++AL L +M
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM-------------------------- 350
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+++H +++ E+D+ V L+ MY KC L AR+ F+ +P++D I+WNA+ISGY
Sbjct: 351 --KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ E M+ L LF+ M + + + TLS+++ ++ + + R+VHG +K GF D+
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N LI Y + E+ E++F D+VS+T+MI+ Y ++A++ + M+
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 528
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
PD +S+L+ACA L + G +LH ++ G + I N+L++MY+KC ID A
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
F ++ ++ ++SW+++I GL + +AL F +M+ + PN +TLVS+L AC
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 513 GALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN--ERDVS 565
G L+ +++ ++ GF P ++D+ R G++ A N E + S
Sbjct: 649 G-LVTEAKLYFESME---ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANAS 704
Query: 566 AWNILL 571
W LL
Sbjct: 705 VWGALL 710
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 198/401 (49%), Gaps = 27/401 (6%)
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G P ++ +L C L+ G ++H H+ + G D + N LI +Y KC
Sbjct: 50 GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGY 109
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR + D + D +SW+A+ISGY +NG LM F M + V + T SSV+ A +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
V D ++G++VHG V+ GF DV V N L+ MY + +++F + ++VVSW +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
SCY +AV + M G P+E +++S+++AC L + G +H ++ G
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
AN L+DMY+K + A+ VF +I +++SW ++I G L+ +AL +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M +++H+ +++ + D F+ L+DMY +C +
Sbjct: 350 MK--------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A FN E+D+ AWN +++GY++ + A F +M
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 424
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 188/365 (51%), Gaps = 5/365 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LHS + K + + + M+ K L A F + ++DL +WN +I GY++
Sbjct: 354 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 413
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EALSL+ M G+ + T +L++ G+ + ++VH ++ G+ +D+ VVN
Sbjct: 414 DMEALSLFVEMH-KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI Y KC + A +F+ D +S+ +MI+ Y + G+ + L LF+ M+++ + P
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D SS+++A + + G+++H +++K GF D+ N L+ MY G+ ++ + F
Sbjct: 533 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 592
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
S + + +VSW+ MI +A++ + M EG P+ IT+ SVL AC G L
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG-LV 651
Query: 417 LGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIIL 473
KL+ +M G +ID+ + I++A+E+ +++P + N W +++
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 474 GLRLN 478
R++
Sbjct: 712 AARIH 716
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ALK MQ++ + D +L+ C +++G LH + K L + G
Sbjct: 513 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 572
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++M+ K G + A F ++ +R + SW+ +IGG A+ G +AL L+ +M GV
Sbjct: 573 NSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML-KEGV 631
Query: 194 KPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
P+ T VL C G V + K E + FG++ + +I + + G +
Sbjct: 632 SPNHITLVSVLGACNHAGLVTEAKLYFESMEEL--FGFKPMQEHYACMIDLLGRAGKINE 689
Query: 251 ARLVFDGMPKRDRIS-WNAMI 270
A + + MP S W A++
Sbjct: 690 AVELVNKMPFEANASVWGALL 710
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 263/506 (51%), Gaps = 20/506 (3%)
Query: 89 LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
LN VD DAL +G ++HS V ++ L V + A ++ + K G L
Sbjct: 167 LNSVVDPDAL-------------RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 213
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF M R + +WN +I Y+ + EA ++QRM G + D TF +L C
Sbjct: 214 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRM-QQEGERCDRVTFLSILDACV 272
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
L+ GK V + +E D+ V ALITMY +C A VF M + + I+W+A
Sbjct: 273 NPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSA 332
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKM 327
+I+ + ++G + L F MM++ + P+ +T S+++ + G E+L R +H + +
Sbjct: 333 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-IHLLITEH 391
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
G D ++ N L+ +Y + ++ VF ++E +++SW +MI Y D A++ +
Sbjct: 392 GLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLF 451
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSK 446
+ M+ +G PD + ++L AC +G+ KL HQ +GL ++ +L++MY+K
Sbjct: 452 RTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAK 510
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSI 505
+D A + ++ ++ + +W +I G L+ RS EAL ++K+ L P + VT +S+
Sbjct: 511 AGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISV 570
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDV 564
L+AC +L GK IH++A+ G+ D + NAL +MY +CG M+ A F+S R
Sbjct: 571 LNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 630
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
+WN +L YA+ G+ + RKM
Sbjct: 631 VSWNGMLQAYAQHGESEEVLKLIRKM 656
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 224/455 (49%), Gaps = 4/455 (0%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G LG A FGK+ R++ SWNV+I Y+ F EAL+L+ M + GV P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAML-LEGVAPNAI 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T VL +CG +L+ G VH + G+ + V AL+ MY KCG L+ A+ VF+ M
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 259 PKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+++ ++WNAM+ Y G K + LF M V + +T +V+++ + G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ +H V + S DV V L+ Y G+ + KVF M + V +W +MIS Y S
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A +Q M+ EG D +T S+L AC L G + + T + +
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
LI MY++C+ + A +VF ++ N+I+W++II + EAL +FR M +
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
PN VT +S+L+ L IH G+ + NAL+++Y RC A
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ E ++ +WN ++ Y + + A + FR M
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTM 454
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 9/495 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ ++ +A MQ+ D ++++ C G ++ +S+
Sbjct: 230 NSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISE 289
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T L + +G A ++M+ + A VFG+M +L +W+ +I +A G EAL
Sbjct: 290 TSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALR- 348
Query: 184 YQRMFWVGGVKPDVYTFPCVLR---TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
Y RM G+ P+ TF +L T G+ +L R +H+ + G + + NAL+
Sbjct: 349 YFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR---IHLLITEHGLDDTTTMRNALVN 405
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y +C AR VFD + + ISWN+MI Y + + L LF M++ + PD +
Sbjct: 406 VYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVN 465
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+++ A + + + VH V + G V L+ MY G + E + M+
Sbjct: 466 FMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD 525
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ + +W +I+ Y +A+E YQ ++ E D++T SVL+AC +L G
Sbjct: 526 EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKM 585
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A+ GL S +I+ N L +MYSKC ++ A +F +P ++ +SW ++ +
Sbjct: 586 IHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGE 645
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPN 538
S E L RKM +K N +T VS+LS+C+ G + G + H+ G+
Sbjct: 646 SEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG 705
Query: 539 ALLDMYVRCGRMKPA 553
L+D+ R G+++ A
Sbjct: 706 CLVDLLGRAGKLQEA 720
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 150/346 (43%), Gaps = 42/346 (12%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+ AL+ +MQ+ I D + ++ C +H V ++ S + +
Sbjct: 445 DDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSL 504
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K G+L A + +M ++ + +WNVLI GYA G EAL YQ++ + + D
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKL-QLEAIPVD 563
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C L GK +H + + G ++DV V NAL MY KCG + AR +FD
Sbjct: 564 KVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD 623
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP R +SWN M+ Y ++GE + L L M + V + +T SV+S+ G L
Sbjct: 624 SMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG---L 680
Query: 317 GREVHGYVIKMGFSDDVSVCNP----LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
E Y +G + V L+ + G +E EK S+M +
Sbjct: 681 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLE---------- 730
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
P +T AS+L AC +LD G
Sbjct: 731 ------------------------PGIVTWASLLGACRVQKDLDRG 752
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 241/451 (53%), Gaps = 21/451 (4%)
Query: 159 RDLFS---------WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
RDLF N L+ + +A + A+ L QR+ V+ D +T +LR C
Sbjct: 523 RDLFDEIRSPTPRLANALLRAHIRARQWRAAILLGQRLR----VRRDGFTLSLLLRACTA 578
Query: 210 VPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+P L G+ VH +R + D V A++ MY +CGD+ A + + K D + +
Sbjct: 579 LPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTS 638
Query: 269 MISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+++GY +NG + L F ++ + VLV P +TL SV+SA+ +G + G+ H YV+
Sbjct: 639 VVTGYEQNGMAEEALEFFARNVVGQGVLVTP--VTLVSVMSAAAQLGHVRKGQACHAYVV 696
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
+ S D+++ N ++ Y+ G+ + ++F M +DV++W+ MI Y
Sbjct: 697 RNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFR 756
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
Y+ M P+ +T+ SVL ACA + + + G +LH++A+ G + +A L+DMY
Sbjct: 757 MYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYM 816
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVS 504
KC C ++A+ +FH++P K+V++W ++I GL N E+L F+ M+LN P++VT+V
Sbjct: 817 KCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVK 876
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERD 563
+L+AC+ G +H + +R G + F+ ALLD+Y +CG + A F + E+D
Sbjct: 877 VLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKD 936
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ W ++ GY G G A +++MI S
Sbjct: 937 IVVWGSMIAGYGAHGLGQEAVALYQRMIASS 967
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 258/499 (51%), Gaps = 7/499 (1%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSM---QELNICVDEDALVNLVRLCEWKRGYDEGLYL 117
++P RL L + +A ++ ++ Q L + D L L+R C G +
Sbjct: 530 RSPTPRLANALLRAHI-RARQWRAAILLGQRLRVRRDGFTLSLLLRACTALPSLTHGRAV 588
Query: 118 HSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
H+ ++ + + A + M+ + GD+ A +G + D+ ++ GY + G
Sbjct: 589 HAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGM 648
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EAL + R GV T V+ + +++G+ H +V+R D+ +VN
Sbjct: 649 AEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVN 708
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
A++ YVK GDL + +F+GM RD I+W+ MI GY ++G+ G ++ M + V P
Sbjct: 709 AVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQP 768
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ +TL SV+ A LV D + G+ +H + +G ++ V L+ MY+ EE ++F
Sbjct: 769 NSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLF 828
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM KDVV+W +I + LP +++ +++ M +PD +T+ VL+AC+ G
Sbjct: 829 HRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNR 888
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
L I LH +R G + +A L+D+YSKC +D A+ VF +K+++ W S+I G
Sbjct: 889 LAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYG 948
Query: 477 LNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDG 534
+ EA+ +++M+ +++PN+VT +S+LSAC+ G + G +I ++ GV +
Sbjct: 949 AHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNA 1008
Query: 535 FLPNALLDMYVRCGRMKPA 553
+A++D+ R G ++ A
Sbjct: 1009 EHQSAMVDLLGRAGELQEA 1027
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 186/394 (47%), Gaps = 19/394 (4%)
Query: 196 DVYTFPCV---------LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
DV FP V L +H +++R G + + L + C
Sbjct: 461 DVGCFPAVASMQPLQKLLEAAAATSTPLAAAHLHANILRSGL---LHSSHHLTAHVLACY 517
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
AR +FD + NA++ + ++ ++L +R V D TLS ++
Sbjct: 518 PPGLARDLFDEIRSPTPRLANALLRAHIRARQWRAAILLGQRLR---VRRDGFTLSLLLR 574
Query: 307 ASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + GR VH ++ S+D V +++MY G+ + +E D+V
Sbjct: 575 ACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIV 634
Query: 366 SWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
T++++ YE + + ++A+E + + + +G + +T+ SV+SA A LG++ G H
Sbjct: 635 LRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAY 694
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+R L + + N ++ Y K + ++ +F + D++VI+W+ +I G + +
Sbjct: 695 VVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTG 754
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+R+M+ ++PNSVTLVS+L ACA + GK +H A+ IG + + AL+DM
Sbjct: 755 FRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDM 814
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
Y++C + A F+ ++DV AW ++ G +
Sbjct: 815 YMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQ 848
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 3/302 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + M + + + LV++++ C +EG LH V L + +
Sbjct: 748 HGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGV 807
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++K A +F +M +D+ +W +IGG + E+L ++ M
Sbjct: 808 ATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDH 867
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD T VL C + +H +++R G+ + V AL+ +Y KCGDL A
Sbjct: 868 V-PDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAV 926
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+G ++D + W +MI+GY +G + + L+ M + P+ +T SV+SA G
Sbjct: 927 RVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSG 986
Query: 313 DEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-SWTTM 370
+ G ++ + ++ G + + ++ + G +E +V M+ + V +W +
Sbjct: 987 LVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCAL 1046
Query: 371 IS 372
++
Sbjct: 1047 LA 1048
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+L A A LH +R+GL+ S+ + A+ L C A ++F +I
Sbjct: 477 LLEAAAATSTPLAAAHLHANILRSGLLHSSHHLTAHVL-----ACYPPGLARDLFDEIRS 531
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIH 522
+ +L + R + A I + L ++ + TL +L AC + +L G+ +H
Sbjct: 532 PTP-RLANALLRAHIRARQWRAAILLGQR-LRVRRDGFTLSLLLRACTALPSLTHGRAVH 589
Query: 523 AHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQG 580
A A+R A D F+ A++ MY RCG M A N + E+ D+ ++TGY + G
Sbjct: 590 AAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGMA 649
Query: 581 ALAEEFFRKMIDSKG 595
A EFF + + +G
Sbjct: 650 EEALEFFARNVVGQG 664
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 269/532 (50%), Gaps = 15/532 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +AL M + D A V + C ++G LHS + + +G
Sbjct: 186 GHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVG 245
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+ + K G + + +F M +++ +W+ ++ YA+ G + A+ L++ M + GV
Sbjct: 246 NALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREML-LDGV 304
Query: 194 KPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLV 249
P+ TF +L +C G + DL RG+++H +++ A DV V AL+ MY +CG +
Sbjct: 305 APNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVS 364
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISA 307
A+ VFD M R+ SWNAM+ Y N ++ L F +++ V PD +T S A
Sbjct: 365 DAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADA 424
Query: 308 SELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
++GD E+H + + S+ DV + + LIKMY + + +V +M +V+
Sbjct: 425 CGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVI 484
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWT+MI E + + A+ Y+ M+ G PD +T+ +V+ A A L +L GI+ H A
Sbjct: 485 SWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQA 544
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK---NVISWTSIILGLRLNNRSF 482
G + ++ N L+ +Y + A VF ++ + +V++W S++ N
Sbjct: 545 AAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPN 604
Query: 483 EALIFFRKMMLNLK-PNSVTLVSILSACA-RIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+AL F++M+ + + P+ T V+IL+ACA L+ G +IHA A G+ D + N L
Sbjct: 605 QALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTL 664
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
L MY RCG + A F++ +++V +W+ + A G A + FR M+
Sbjct: 665 LHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGML 716
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 275/557 (49%), Gaps = 24/557 (4%)
Query: 29 SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQE 88
+FY K H S S++V N S+I NG E A++ M
Sbjct: 250 NFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQ--------NGHHEPAVELFREMLL 301
Query: 89 LNICVDEDALVNLVRLCEWK---RGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFG 144
+ ++ V+L+ C + G +H+ ++ T + V + A ++M+ + G
Sbjct: 302 DGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCG 361
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCV 203
+ A VF +M R++ SWN ++ Y+ EAL ++ M G GVKPD TF
Sbjct: 362 SVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSA 421
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLVFDGMPKR 261
CG + DL R E+H + + DVV +ALI MY C L A V D MP+
Sbjct: 422 ADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRT 481
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ ISW +MI +N + + ++ M+ PD +T+ +VI A+ + D K G E H
Sbjct: 482 NVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFH 541
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM---ESKDVVSWTTMISCYEGSV 378
GF+ V N L+ +Y + G+ + E VF + +DVV+W +M+S + +
Sbjct: 542 AQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNG 601
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACAC-LGNLDLGIKLHQLAMRTGLISYIIIA 437
LP++A+ T+Q M G PD+ T ++L+ACA L G+K+H LA GL S I +A
Sbjct: 602 LPNQALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVA 661
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
NTL+ MYS+C + +A +VFH + KNV+SW+++ N + AL FR M+ ++
Sbjct: 662 NTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQ 721
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAW 554
PN+VT +SILS C+ G LM + +A+ + + LLD+ R G+ A
Sbjct: 722 PNAVTFISILSGCSHTG-LMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRA- 779
Query: 555 NQFNSNERDVSAWNILL 571
+ ++ + AWN LL
Sbjct: 780 EELATHLPNPVAWNSLL 796
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 247/505 (48%), Gaps = 27/505 (5%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ D G +H + + H L N + M+ + + A VF + +++F+W +LI
Sbjct: 9 KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILI 68
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRF 226
+ G F EA+ L++ M V GV+ D +TF +L C G+ L GK +H + +
Sbjct: 69 VAHTHNGLFFEAVELFREMD-VHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQ 127
Query: 227 GYE----ADVDVVNALITMYVKCGDLVRARLVFDGMPKR----DRISWNAMISGYFENGE 278
G + V A+I Y + G + +A +F+ M + D I+W AM++ Y + G
Sbjct: 128 GLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGH 187
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L+LF M ++PD + I A + + G +H ++ D V N
Sbjct: 188 AREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ Y G E +FS M+ K+VV+W+ +++ Y + + AVE ++ M +G P+
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPN 307
Query: 399 EITIASVLSACACLG---NLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
++T S+L +C+ G +L G K+H ++ T +++A L++MY +C + A
Sbjct: 308 KVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAK 367
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACAR 511
VF ++ +N+ SW ++++ LN RS EAL FFR M+L +KP+++T VS AC
Sbjct: 368 TVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGM 427
Query: 512 IGALMCGKEIHAHALRIGVAF-----DGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVS 565
+G L EIH+ RI ++ D L +AL+ MY C R+ A + R +V
Sbjct: 428 MGDLSRAVEIHS---RISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVI 484
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+W ++ + A +R M
Sbjct: 485 SWTSMILACEQNEDNEAAIRVYRAM 509
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 208/405 (51%), Gaps = 16/405 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ G +L G+ VH+ +I GY D + N LI MY +C + A VF + +++
Sbjct: 1 MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KLGREV 320
+W +I + NG + + + LF M V D T S+++ A +G LG+ +
Sbjct: 61 VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120
Query: 321 HGYVIKMGF---SDDVSVCN-PLIKMYLSFGNREEGEKVFSRME----SKDVVSWTTMIS 372
H + + G S+ +C+ +I Y G+ E+ ++F RM+ D+++WT M++
Sbjct: 121 HSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMT 180
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ ++ M+ +G PD + + AC+ + +L+ G LH + + +
Sbjct: 181 AYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVEC 240
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ N L++ Y+K + ++ +F + KNV++W++I+ N A+ FR+M+
Sbjct: 241 DGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREML 300
Query: 493 LN-LKPNSVTLVSILSACARIGA---LMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRC 547
L+ + PN VT VS+L +C+ G L G++IHA L+ A D + AL++MY RC
Sbjct: 301 LDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRC 360
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G + A F+ R++++WN +L Y+ + A FFR M+
Sbjct: 361 GSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTML 405
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 234/463 (50%), Gaps = 6/463 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LGN + M+ + G L A F + R++FSW +LI + G E L L + M +
Sbjct: 39 LGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQNGEASEGLELLKFMD-LE 97
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G + + TF +L C DL GK++H V G E D+ NAL+ MY C L A
Sbjct: 98 GTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEA 157
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RLVF+ M RD +SW +IS Y G ++ L L+ M + PD +TL SV+ A +
Sbjct: 158 RLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASL 217
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+ +H ++ G DV V ++ Y ++ +VF R+ KD+V W MI
Sbjct: 218 RTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMI 277
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +KA Y M P+++T+ ++L +C+ ++ G LH+ A G +
Sbjct: 278 GAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYL 337
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK--NVISWTSIILGLRLNNRSFEAL-IFF 488
S+ + N LI+MY+KC ++ A VF + ++ NVI+W ++I+ + + EAL I+
Sbjct: 338 SHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYH 397
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
R +K + VT ++L+ CA G G+E+H+ +L G D + N+L+ +Y CG
Sbjct: 398 RMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSD-VVQNSLICLYGGCG 456
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F S ++V +W+ ++ YA G+ A F M
Sbjct: 457 NLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTM 499
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 210/396 (53%), Gaps = 4/396 (1%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T+ +L+ G L G+ VH +I G + D + N L+ MY +CG L AR F G+
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+R+ SW +IS +NGE +GL L M + + +T S++ A + GD LG+
Sbjct: 64 HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H V G D+ N L+ MY + + +E VF RM +DVVSWT +IS Y +
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
P +A++ Y+ ME E S PD +T+ SVL ACA L L G +H+ + +G+ + + +
Sbjct: 184 YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGT 243
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
++ Y KC+ +D A +VF +I DK+++ W ++I N+ +A + +M+ N ++P
Sbjct: 244 AVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRP 303
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N VTL+++L +C+ + G +H A G + NAL++MY +CG ++ A F
Sbjct: 304 NDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVF 363
Query: 558 ---NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +V WN ++ A+ A + + +M
Sbjct: 364 IEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRM 399
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 160/538 (29%), Positives = 251/538 (46%), Gaps = 22/538 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG + L+ L M ++ ++L+ C G +H V
Sbjct: 78 LVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETD 137
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ GNA L+M+ L A VF +M RD+ SW ++I YA AG+ EAL LY+RM
Sbjct: 138 IITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQ 197
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+PD T VL C + L GK +H ++ G E DV V A+++ Y KC +
Sbjct: 198 EFS-RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVD 256
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD + +D + WNAMI Y +N K L++ M E + P+ +TL +++ +
Sbjct: 257 DARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCS 316
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF--SRMESKDVVSW 367
+ G +H G+ SV N LI MY G+ E +VF + + +V++W
Sbjct: 317 STCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITW 376
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TMI L +A++ Y M EG ++T +VL+ CA G+ G ++H ++
Sbjct: 377 NTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLA 436
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
TG S ++ N+LI +Y C ++ A F + KNV+SW+SI+ N A
Sbjct: 437 TGCCS-DVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNL 495
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH-----AHALRIGVAFDGFLPNALL 541
F M + + PN VT S+L AC+ G G H L G + N L
Sbjct: 496 FWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLL- 554
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG---YAERGQGALAEEFFRKMIDSK 594
+ GR+K A + ++ + D SAW LL + ++ GALA ++++D++
Sbjct: 555 ---AKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAA---KQLLDAE 606
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 4/295 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR VH +I G D + N L++MY G+ ++ F + ++V SWT +IS
Sbjct: 21 GRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQ 80
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ + +E + M+ EG+ ++IT S+L AC+ G+L LG K+H+ GL + II
Sbjct: 81 NGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIIT 140
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL- 495
N L++MY+ C +D+A VF ++ ++V+SWT II EAL +R+M
Sbjct: 141 GNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFS 200
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P++VTL+S+L ACA + L+ GK IH + GV D F+ A++ Y +C + A
Sbjct: 201 RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQ 260
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ++D+ WN ++ YA+ A + +M+++ + N L+ L C
Sbjct: 261 VFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSC 315
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 260/508 (51%), Gaps = 25/508 (4%)
Query: 93 VDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
+DE L ++ C RG G +H + + V + NA + M+ K G +A
Sbjct: 1 MDEVTLCLALKAC---RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC 57
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDE---ALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
+F + D D+ SWN ++ G FD+ AL+ RM GV D +T+ L C
Sbjct: 58 IFENLVDPDVVSWNTILSG------FDDNQIALNFVVRM-KSAGVVFDAFTYSTALSFCV 110
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
G G ++ V++ G E+D+ V N+ ITMY + G AR VFD M +D ISWN+
Sbjct: 111 GSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNS 170
Query: 269 MISGYFENGEY-MKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
++SG + G + + +++F MMRE V+ D ++ +SVI+ D KL R++HG IK
Sbjct: 171 LLSGLSQEGTFGFEAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIK 229
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G+ + V N L+ Y G E + VF +M ++VVSWTTMIS + D AV
Sbjct: 230 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSI 284
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M +G P+E+T +++A C + G+K+H L ++TG +S + N+ I +Y+K
Sbjct: 285 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 344
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+ ++ A + F I + +ISW ++I G N S EAL F PN T S+L
Sbjct: 345 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVL 404
Query: 507 SACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+A A ++ G+ HAH L++G+ + +ALLDMY + G + + FN ++++
Sbjct: 405 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKN 464
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMI 591
W +++ Y+ G F KMI
Sbjct: 465 QFVWTSIISAYSSHGDFETVMNLFHKMI 492
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 258/481 (53%), Gaps = 14/481 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL ++ M+ + D + C G+ GL L S V KT + +GN+F++
Sbjct: 83 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 142
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDV 197
M+ + G A VF +M +D+ SWN L+ G ++ G F EA+ +++ M GV+ D
Sbjct: 143 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR-EGVELDH 201
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F V+ TC DLK +++H I+ GYE+ ++V N L++ Y KCG L + VF
Sbjct: 202 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 261
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R+ +SW MIS ++ + +F+ MR V P+ +T +I+A + K G
Sbjct: 262 MSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 316
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++HG IK GF + SV N I +Y F E+ +K F + ++++SW MIS + +
Sbjct: 317 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 376
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYII 435
+A++ + AE +MP+E T SVL+A A ++ + G + H ++ GL S +
Sbjct: 377 GFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 435
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRKMML- 493
+++ L+DMY+K ID++ +VF+++ KN WTSII ++ FE ++ F KM+
Sbjct: 436 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS-SHGDFETVMNLFHKMIKE 494
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKP 552
N+ P+ VT +S+L+AC R G + G EI + + + + ++DM R GR+K
Sbjct: 495 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 554
Query: 553 A 553
A
Sbjct: 555 A 555
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 13/403 (3%)
Query: 64 NSRLNELCLNGSL--EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS L+ L G+ E + + D M+E + +D + +++ C + +H +
Sbjct: 169 NSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLC 227
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + +GN +S + K G L VF +M +R++ SW +I D+A+
Sbjct: 228 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAV 282
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
S++ M + GV P+ TF ++ +K G ++H I+ G+ ++ V N+ IT+
Sbjct: 283 SIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 341
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K L A+ F+ + R+ ISWNAMISG+ +NG + L +F+ + P+ T
Sbjct: 342 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 400
Query: 302 SSVISASELVGD--EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV++A D K G+ H +++K+G + V + L+ MY GN +E EKVF+ M
Sbjct: 401 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 460
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ WT++IS Y + + + M E PD +T SVL+AC G +D G
Sbjct: 461 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 520
Query: 420 KLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ + + L + ++DM + + +A E+ ++P
Sbjct: 521 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 563
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 241/464 (51%), Gaps = 14/464 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L + G L A VF ++ D ++N LI Y+ G F A+ LY+ M + V P+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR-VPPN 98
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTFP VL+ C + DL G+ +H H G D+ V ALI +Y++C A VF
Sbjct: 99 KYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEK 315
MP RD ++WNAM++GY +G Y + + M++ + P+ TL S++ G
Sbjct: 159 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218
Query: 316 LGREVHGYVIKMGF---SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G VH Y ++ + V + L+ MY + +VF M ++ V+W+ +I
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 373 CYEGSVLPDKAVETYQM---MEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
G VL D+ E + + M EG ++AS L CA L +L +G +LH L ++
Sbjct: 279 ---GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G+ + + N+L+ MY+K I++A +F +I K+ IS+ +++ G N ++ EA + F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM N++P+ T+VS++ AC+ + AL G+ H + G+A + + N+L+DMY +C
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKC 455
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ + F+ RD+ +WN ++ GY G G A F M
Sbjct: 456 GRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSM 499
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 247/524 (47%), Gaps = 24/524 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + G A+ SM + ++ +++ C G +H+ +
Sbjct: 68 NALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAA 127
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H + + A + ++++ G A VF KM RD+ +WN ++ GYA G + A++
Sbjct: 128 VGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAH 187
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY----EADVDVVNALI 239
M GG++P+ T +L L +G VH + +R Y E V + AL+
Sbjct: 188 LLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR-AYLDQNEEQVLIGTALL 246
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD-F 298
MY KC LV A VF GM R+ ++W+A+I G+ + LF +++LV+ F
Sbjct: 247 DMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLF---KDMLVEGMCF 303
Query: 299 MTLSSVISASEL---VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
++ +SV SA + + D ++G ++H + K G D++ N L+ MY G E +
Sbjct: 304 LSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATML 363
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + KD +S+ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L
Sbjct: 364 FDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAAL 423
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G H + GL I N+LIDMY+KC ID + +VF ++P ++++SW ++I G
Sbjct: 424 QHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGY 483
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
++ EA F M +P+ VT + +++AC+ G + GK H G
Sbjct: 484 GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGK----HWFDTMTHKYG 539
Query: 535 FLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
LP ++D+ R G + A+ S + DV W LL
Sbjct: 540 ILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 228/458 (49%), Gaps = 11/458 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ L +G A+ +L MQ+ + + LV+L+ L +G +H+
Sbjct: 169 NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCL 228
Query: 123 KT---MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ + V +G A L M+ K L +A VF M R+ +W+ LIGG+ E
Sbjct: 229 RAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTE 288
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A +L++ M G + LR C + DL+ G ++H + + G AD+ N+L+
Sbjct: 289 AFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLL 348
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+MY K G + A ++FD + +D IS+ A++SGY +NG+ + ++F M+ V PD
Sbjct: 349 SMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIA 408
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I A + + GR HG VI G + + S+CN LI MY G + +VF +M
Sbjct: 409 TMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKM 468
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++D+VSW TMI+ Y L +A + M+ +G PD++T +++AC+ G + G
Sbjct: 469 PARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGK 528
Query: 420 K-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ + G++ + ++D+ ++ +D+A + +P K +V W +++ R+
Sbjct: 529 HWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRI 588
Query: 478 NNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ + +M+ L P N V L +I SA R
Sbjct: 589 -HKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGR 625
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 258/508 (50%), Gaps = 20/508 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFG--DLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H +++ S+ L N L+ + + G D A + +M R+ S+N+LI Y++A
Sbjct: 32 VHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRA 91
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G +E+L + VK D +T+ L C LK GK VH + G V V
Sbjct: 92 GQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFV 151
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L++MY +CGD+ AR VFD +RD +SWN+++SGY G + + L +F +MR +
Sbjct: 152 SNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAM 211
Query: 295 DPDFMTLSSVISASELVGD---EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ L SVI GD + VHG V+K G D+ + + ++ MY G E
Sbjct: 212 GLNSFALGSVIKCCS-GGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSE 270
Query: 352 GEKVFSRMESKDVVSWTTMIS--CYEGSVLPD----KAVETYQMMEAEGSMPDEITIASV 405
+F + +VV + MI+ C + + + +A+ Y +++ G P E T +SV
Sbjct: 271 AVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSV 330
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+ AC G+++ G ++H ++ I + LID+Y C++ F +P ++V
Sbjct: 331 IRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDV 390
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
++WT++I G N AL F +++ + LKP+ T+ S+++ACA + + G+++
Sbjct: 391 VTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCF 450
Query: 525 ALRIGVAFDGF--LPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGA 581
A + G FD F + N+ + MY R G ++ A +F E DV +W+ +++ +A+ G
Sbjct: 451 ATKSG--FDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCAR 508
Query: 582 LAEEFFRKMIDSK--GNWRKLMGLFRKC 607
A +FF +M+ +K N +G+ C
Sbjct: 509 QALQFFNEMVGAKVVPNEITFLGVLTAC 536
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 213/440 (48%), Gaps = 20/440 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY--LHSVVSKTMSHLSVR 131
G+ E+ L+ M+ + ++ AL ++++ C G G+ +H V K +
Sbjct: 194 GAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLF 253
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK------AGFFDEALSLYQ 185
L +A + M+ K G L A +F + D ++ +N +I G + EALSLY
Sbjct: 254 LASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYS 313
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G++P +TF V+R C D++ GK++H V++ ++ D + +ALI +Y
Sbjct: 314 EL-QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNS 372
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
+ F +PK+D ++W AMISG +N + + L LF + V + PD T+SSV+
Sbjct: 373 ACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVM 432
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+A + + G ++ + K GF ++ N I MY GN E + F MES DVV
Sbjct: 433 NACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVV 492
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-L 424
SW+ +IS + +A++ + M +P+EIT VL+AC+ G +D G++ ++ +
Sbjct: 493 SWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIM 552
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKAL-----EVFHQIPDKNVISWTSIILGLRLNN 479
M GL + ++D+ + + A +FH P + W S++ R+ +
Sbjct: 553 KMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEP----VVWQSLLGSCRI-H 607
Query: 480 RSFEALIFFRKMMLNLKPNS 499
R E ++ L+P S
Sbjct: 608 RDMERGQLVADRIMELQPAS 627
>gi|224145077|ref|XP_002325518.1| predicted protein [Populus trichocarpa]
gi|222862393|gb|EEE99899.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 294/594 (49%), Gaps = 11/594 (1%)
Query: 11 QTPLRQNLRNPKTRIPETSFYFKP-KTRHFSSKNAQSVQVLNTQNTSSIATKNPNS---R 66
Q PL N+ + + ++S +P +T++ + K+ Q + + + KNP +
Sbjct: 15 QNPLNINITHRQFSKIKSSTQTQPVQTQNPNKKHQQFDERDAFPASLPLHKKNPQAIYKD 74
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
+ L+ AL +D M + I V+ L+ C + + +H+ +
Sbjct: 75 IQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRINGL 134
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGK-MCDRDLFSWNVLIGGYAKAG--FFDEALSL 183
+ L + M+ G + A VF + ++ WN LI G +G + + LS
Sbjct: 135 QNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWNALIRGTVISGKKRYGDVLSA 194
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
YQ M V GV+ + YTF V+++ G LK+G + H +I+ G + + LI MY
Sbjct: 195 YQEMR-VNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDMYF 253
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG A VF+ + +RD ++W AMI+G+ N + L M + P+ + ++S
Sbjct: 254 KCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITS 313
Query: 304 VISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++ V +LG+EVH YV+KM G+S ++S+ + LI MY G+ G +VF +
Sbjct: 314 ILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFYGSRER 373
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+VVSWT ++S Y + ++A+ + M+ EG PD +T+A+V+ CA L L G ++H
Sbjct: 374 NVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIH 433
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+++ + + + +LI MYSKC +D ++++F + +NVI+WT++I N
Sbjct: 434 AFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCIN 493
Query: 483 EALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
EA FR M + +P+SVT+ +LS C++I L GKEIH H L+ F+ + L+
Sbjct: 494 EAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELV 553
Query: 542 DMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMIDSK 594
MY CG + A + FN+ S W ++ Y A + F +M K
Sbjct: 554 KMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRK 607
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 219/436 (50%), Gaps = 6/436 (1%)
Query: 83 LDSMQELNIC---VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
L + QE+ + ++E N+++ +G H+++ K S L + M
Sbjct: 192 LSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLIDM 251
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ K G A VF ++ +RD+ +W +I G+A EAL Y R G+ P+
Sbjct: 252 YFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHNRRQWEALD-YVRWMVSEGMYPNSVI 310
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L G V + G+EVH +V++ GY ++ + + LI MY KCGD+ R VF G
Sbjct: 311 ITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRRVFYGS 370
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+R+ +SW A++SGY NG + L + M++ PD +T+++VI + K G+
Sbjct: 371 RERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGK 430
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
E+H + +K F +VS+ LIKMY G + K+F ME+++V++WT MI Y +
Sbjct: 431 EIHAFSVKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENG 490
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A ++ M+ PD +T+A +LS C+ + L G ++H ++ S +++
Sbjct: 491 CINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSS 550
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
L+ MY C + A VF+ +P K ++WT+II N+ +A+ F +M P
Sbjct: 551 ELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTP 610
Query: 498 NSVTLVSILSACARIG 513
N T +LS C G
Sbjct: 611 NDFTFKVVLSICDEAG 626
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 164/321 (51%), Gaps = 8/321 (2%)
Query: 107 WKRGYDEGLYLHSVVSKTMS-HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
W R + ++ + + K S LS++ G + M+ K GD+G VF +R++ SW
Sbjct: 322 WARRLGQEVHCYVLKMKGYSRELSIQSG--LIDMYCKCGDMGSGRRVFYGSRERNVVSWT 379
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
L+ GY G ++AL + + W+ G +PDV T V+ C + LK GKE+H
Sbjct: 380 ALMSGYVSNGRLEQAL---RSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFS 436
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
++ + +V + +LI MY KCG L + +FDGM R+ I+W AMI Y ENG +
Sbjct: 437 VKKLFLPNVSLTTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAF 496
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
+F M+ PD +T++ ++S + K G+E+HG+++K F V + L+KMY
Sbjct: 497 NVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMY 556
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
S G E VF+ + K ++WT +I Y + L A++ + M + P++ T
Sbjct: 557 GSCGLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFK 616
Query: 404 SVLSACACLGNLDLGIKLHQL 424
VLS C G D ++ +L
Sbjct: 617 VVLSICDEAGFADDACRIFEL 637
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG LEQAL+ + MQ+ D + ++ +C + G +H+ K + +V L
Sbjct: 388 NGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSL 447
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ + M+ K G L ++ +F M R++ +W +I Y + G +EA ++++ M W
Sbjct: 448 TTSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQW-SK 506
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD T +L C + LK GKE+H H+++ +E+ V + L+ MY CG + A
Sbjct: 507 HRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAE 566
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ +P + ++W A+I Y N + + LF MR P+ T V+S + G
Sbjct: 567 SVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVLSICDEAG 626
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 252/494 (51%), Gaps = 24/494 (4%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
VN ++ KRG D+ LY+++ A + ++K G HA +F +
Sbjct: 62 VNQIQTQLLKRGIDQFLYVNT---------------ALIDFYMKLGFTTHARQLFEDLPS 106
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
D+ SWNVLI GY++ G +AL L+ M +P+ T +L +CG +G+
Sbjct: 107 ADVVSWNVLICGYSQHGHPHDALQLFVHML-RESFRPNQTTIASLLPSCGRRELFLQGRS 165
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH I+ G D + NAL +MY KC DL ++L+F M +++ ISWN MI Y +NG
Sbjct: 166 VHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGF 225
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
K ++ F M + P +T+ +++SA+ + VH Y+IK GF+ D SV
Sbjct: 226 EDKAVLCFKEMLKEGWQPSPVTMMNLMSAN------AVPETVHCYIIKCGFTGDASVVTS 279
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ +Y G + + ++ +KD++S T +IS Y + AVE + PD
Sbjct: 280 LVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPD 339
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ + SVL + + +G H ++ GL + ++AN LI YS+ I AL +F
Sbjct: 340 AVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFF 399
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMC 517
+K +I+W S+I G +S +A+ F +M M KP+++T+ S+LS C ++G L
Sbjct: 400 DRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRI 459
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
G+ +H + LR V + F AL+DMY +CGR+ A F S N+ + WN +++GY+
Sbjct: 460 GETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSL 519
Query: 577 RGQGALAEEFFRKM 590
G A F K+
Sbjct: 520 YGLEHKAFGCFSKL 533
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 243/510 (47%), Gaps = 21/510 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G AL+ M + ++ + +L+ C + + +G +H+ K L +L
Sbjct: 122 HGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQL 181
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA SM+ K DL + +F +M ++++ SWN +IG Y + GF D+A+ ++ M G
Sbjct: 182 SNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEML-KEG 240
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P T L + VP+ VH ++I+ G+ D VV +L+ +Y K G A+
Sbjct: 241 WQPSPVTM-MNLMSANAVPE-----TVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAK 294
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+++ P +D IS +IS Y E GE + FI ++ + PD + L SV+
Sbjct: 295 LLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPS 354
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+G HGY +K G ++D V N LI Y F +F K +++W +MIS
Sbjct: 355 HFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMIS 414
Query: 373 -CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
C + D A+E + M G PD ITIAS+LS C LG L +G LH +R +
Sbjct: 415 GCVQAGKSSD-AMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVK 473
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
LIDMY+KC +D A ++F+ I D +++W SII G L +A F K+
Sbjct: 474 VEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKL 533
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
L+P+ +T + +L+AC G + G E RI G +P ++ +
Sbjct: 534 QEQGLEPDKITFLGVLAACTHGGLVYAGMEY----FRIMRKEYGLMPTLQHYACIVGLLG 589
Query: 546 RCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
R G K A N+ E D + W LL+
Sbjct: 590 RAGLFKEAIEIINNMEIRPDSAVWGALLSA 619
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARI---------GALMCGKEIHAHALRIGVAFD 533
AL+ FR+++ + PN +T ++ AC A + +I L+ G+
Sbjct: 18 ALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQF 77
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++ AL+D Y++ G A F DV +WN+L+ GY++ G A + F M+
Sbjct: 78 LYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLR 137
Query: 593 S--KGNWRKLMGLFRKC 607
+ N + L C
Sbjct: 138 ESFRPNQTTIASLLPSC 154
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 270/521 (51%), Gaps = 11/521 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
A + M+++ ++ + +++ C E + LHS + KT +L + +A +
Sbjct: 332 SAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALI 391
Query: 138 SMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+M+ K G + + VF +M ++L W V+I +A++G A+ L+QRM G++PD
Sbjct: 392 NMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRML-QEGLRPD 450
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ VL + L G+ +H ++++ G D+ V ++L TMY KCG L + VF+
Sbjct: 451 KFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFE 507
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
MP +D +SW +MI+G+ E+ + + LF M + PD MTL++ ++A + +
Sbjct: 508 QMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEK 567
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+EVHGY ++ +V V L+ MY G +VF + KD S ++++S Y
Sbjct: 568 GKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQ 627
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ + A+ + + D T++SV+ A A L +LD+G +LH + GL + + +
Sbjct: 628 NGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSV 687
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
++L+ MYSKC ID+ +VF QI ++ISWT++I+ + + EAL + M
Sbjct: 688 GSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGT 747
Query: 496 KPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
KP+SVT V +LSAC+ G + G +++ A G+ + ++D+ R GR+K A
Sbjct: 748 KPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEA- 806
Query: 555 NQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+F +N E D W ILL G L +++I+
Sbjct: 807 ERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIE 847
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 13/466 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ N+ + + K + HA +F K ++ SWN+LI G + F+++ + +M +
Sbjct: 83 MTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRF-S 141
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G P+ +T+ VL C + G+ V+ ++ G+ ++ V +I ++ K A
Sbjct: 142 GFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDA 201
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF + + + WNA+ISG +N E L LF M P+ T SS+++A +
Sbjct: 202 LRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAAL 261
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ + GR V G+VIK G +DV V +I +Y + ++ K F RM ++VVSWTT+I
Sbjct: 262 EELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTII 321
Query: 372 SCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
S G V D ++ + M G + TI SVL+AC + ++LH +T
Sbjct: 322 S---GFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKT 378
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIF 487
G +++ LI+MYSK +D + VF ++ KN+ W +I + + A+
Sbjct: 379 GFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVEL 438
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M+ L+P+ S+LS I +L G+ IH + L+IG+ D + ++L MY +
Sbjct: 439 FQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSK 495
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
CG ++ ++ F ++D +W ++TG++E A + FR+M+
Sbjct: 496 CGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREML 541
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 204/393 (51%), Gaps = 10/393 (2%)
Query: 206 TCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
T G L+ K +H H ++ +++ + N+L+ Y K +V A +FD P + I
Sbjct: 54 TKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVI 113
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SWN +ISG +N + F MR DP+ T SV+SA +G G V+
Sbjct: 114 SWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLA 173
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-- 382
+K GF + V +I ++ + E+ +VF + ++VV W +IS G+V +
Sbjct: 174 LKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIIS---GAVKNRENW 230
Query: 383 -AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A++ + M MP+ T +S+L+ACA L L+ G + ++ G + + +I
Sbjct: 231 VALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAII 290
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSV 500
D+Y+KC+ +D+A++ F ++P +NV+SWT+II G + S A FF++M + K N+
Sbjct: 291 DLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNY 350
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T+ S+L+AC + ++H+ + G D + +AL++MY + G + + F
Sbjct: 351 TITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREM 410
Query: 561 E--RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
E ++++ W ++++ +A+ G A E F++M+
Sbjct: 411 ESTKNLAMWAVMISAFAQSGSTGRAVELFQRML 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +E AL ++ ++ +D + +++ D G LH+ V+K + V +
Sbjct: 628 NGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSV 687
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G++ ++M+ K G + VF ++ DL SW +I YA+ G EAL +Y M G
Sbjct: 688 GSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMR-KEG 746
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
KPD TF VL C ++ G ++ +G E ++ + + G L A
Sbjct: 747 TKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEA 806
Query: 252 RLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP----DFMTLSSV 304
+ MP + D + W +++ +G+ G + R + ++P ++TLS++
Sbjct: 807 ERFINNMPIEPDALLWGILLAACKVHGDIELGRL--AAKRVIELEPCEAGAYVTLSNI 862
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 259/492 (52%), Gaps = 11/492 (2%)
Query: 109 RGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
+ + +G LH+ ++S ++ + L + + G + A +F + ++ F WN +
Sbjct: 73 KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFM 132
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GYA G ++L LY+ M G + D +T+P VL+ CG + ++ G+ VH V+ G
Sbjct: 133 IRGYASNGLPMKSLVLYREMLCFGQ-RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
E+D+ V N+L+ MY K GD+ AR+VFD M +RD SWN MISGY +N + ++F
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFD 251
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSF 346
+M + + D TL ++SA + K G+ +HGY ++ + + N LI+MY +
Sbjct: 252 LMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
+ ++F R+ KD VSW +MI Y + +++ ++ M +GS PD++T +VL
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC + L G+ +H ++ G + I+ L+DMYSKC + + VF ++PDK+++
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH--- 522
SW++++ G L+ R EA+ M N + P++ SILSAC+ G ++ GKEI
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQG 580
+ A + + ++D+ R G + A+ + E ++ W LLT
Sbjct: 492 EKEYNVKPALSHY--SCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNI 549
Query: 581 ALAEEFFRKMID 592
LAE +K+ D
Sbjct: 550 KLAEISAQKVFD 561
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 202/392 (51%), Gaps = 11/392 (2%)
Query: 200 FPCVLRTCGGV-------PDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRA 251
+P CG + K+G+++H H+I F E + + L Y CG + +A
Sbjct: 55 YPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQA 114
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++FDG+ ++ WN MI GY NG MK L+L+ M D T V+ A +
Sbjct: 115 EVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++GR VH V+ G D+ V N L+ MY FG+ VF RM +D+ SW TMI
Sbjct: 175 LLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMI 234
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + A + +M G D T+ +LSACA L + G +H A+R +
Sbjct: 235 SGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIG 294
Query: 432 SY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+Y N+LI+MY C C+ A +F ++ K+ +SW S+ILG N +FE+L FR+
Sbjct: 295 NYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRR 354
Query: 491 MMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L+ P+ VT +++L AC +I AL G IH++ ++ G + + AL+DMY +CG
Sbjct: 355 MALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGS 414
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
+ + F+ ++ + +W+ ++ GY G+G
Sbjct: 415 LACSRRVFDEMPDKSLVSWSAMVAGYGLHGRG 446
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG ++L+ M D+ + ++ C+ G+ +HS + K
Sbjct: 333 NSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK 392
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G A + M+ K G L + VF +M D+ L SW+ ++ GY G EA+S+
Sbjct: 393 KGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISI 452
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
M V PD F +L C + GKE+ + + + + + + ++ +
Sbjct: 453 LDGM-KANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLL 511
Query: 243 VKCGDLVRARLVFDGM---PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+ G L A ++ M P D W A+++ K + L + + + D +
Sbjct: 512 GRAGHLDEAYVIIRTMEIKPTSD--IWAALLTA----SRLHKNIKLAEISAQKVFDMNPK 565
Query: 300 TLSSVISASELVGDEK 315
+SS I S + EK
Sbjct: 566 VVSSYICLSNIYAAEK 581
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 159/524 (30%), Positives = 257/524 (49%), Gaps = 11/524 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L G + AL M++ I + +++ C +H+ V K
Sbjct: 22 NSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLK 81
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ + A + M+VK G L A VF +M RD+ SWN ++ G+A++GF D LS
Sbjct: 82 SCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR-LSC 140
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
R + G++PD T ++ + V L V+ IR G DV V N LI Y
Sbjct: 141 LLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYS 200
Query: 244 KCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
KCG+L A +FD + R +SWN+MI+ Y +++K + + M + PD T+
Sbjct: 201 KCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTI 260
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+++S+ G VH + +K+G DV V N LI MY G+ +F+ M
Sbjct: 261 LNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSD 320
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K VSWT MIS Y +A+ + MEA G PD +T+ +++S C G L+LG +
Sbjct: 321 KTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWI 380
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
++ GL +++ N LIDMY+KC + A E+F+ + ++ V+SWT++I LN
Sbjct: 381 DNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDV 440
Query: 482 FEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLP 537
+AL +FF + + +KPN +T +++L ACA G + G E + I D +
Sbjct: 441 KDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHY-- 498
Query: 538 NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ 579
+ ++D+ R G ++ A S E D W+ LL+ G+
Sbjct: 499 SCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGK 542
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 229/453 (50%), Gaps = 7/453 (1%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
LF+WN G AL L+++M G+ P+ TFP VL+ C + L+ + +H
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQ-SGITPNNSTFPFVLKACAKLSHLRNSQIIH 76
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
HV++ +++++ V A + MYVKCG L A VF MP RD SWNAM+ G+ ++G
Sbjct: 77 AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L MR + PD +T+ +I + V V+ + I++G DVSV N LI
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196
Query: 341 KMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
Y GN E +F + S + VVSW +MI+ Y KAV Y+ M G PD
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
TI ++LS+C L G+ +H ++ G S + + NTLI MYSKC + A +F+
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMC 517
+ DK +SWT +I EA+ F M KP+ VT+++++S C + GAL
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GK I +++ G+ + + NAL+DMY +CG A F + R V +W ++T A
Sbjct: 377 GKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACAL 436
Query: 577 RGQGALAEEFFRKMID--SKGNWRKLMGLFRKC 607
G A E F M++ K N + + + C
Sbjct: 437 NGDVKDALELFFMMLEMGMKPNHITFLAVLQAC 469
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 6/376 (1%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLY 184
H+ V + N ++ + K G+L A +F ++ R + SWN +I YA +A++ Y
Sbjct: 186 HMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCY 245
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
+ M GG PD+ T +L +C L G VH H ++ G ++DV VVN LI MY K
Sbjct: 246 KGML-DGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSK 304
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CGD+ AR +F+GM + +SW MIS Y E G + + LF M PD +T+ ++
Sbjct: 305 CGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLAL 364
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
IS G +LG+ + Y I G D+V VCN LI MY G + +++F M ++ V
Sbjct: 365 ISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTV 424
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQ 423
VSWTTMI+ + A+E + MM G P+ IT +VL ACA G ++ G++ +
Sbjct: 425 VSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNM 484
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSF 482
+ + G+ I + ++D+ + + +ALE+ +P + + W++++ +L+ +
Sbjct: 485 MTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGK-M 543
Query: 483 EALIFFRKMMLNLKPN 498
E + + + L+P
Sbjct: 544 EMGKYVSEQLFELEPQ 559
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 232/441 (52%), Gaps = 6/441 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-G 175
L + ++ + H SV N + V+ GD ++ ++F + + +S+N +I G
Sbjct: 53 LRQIQAQMLLH-SVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWN 111
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ ALSLY+RM + G+KPD +T+ V C + ++ G+ VH + + G E DV +
Sbjct: 112 DHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
++LI MY KCG + AR +FD + +RD +SWN+MISGY E G + LF M E +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD TL S++ A +GD + GR + I + + LI MY G+ + +V
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F++M KD V+WT MI+ Y + +A + + ME G PD T+++VLSAC +G L
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++ A L I +A L+DMY KC +++AL VF +P KN +W ++I
Sbjct: 351 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 410
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDG 534
+ EAL+ F +M ++ P+ +T + +LSAC G + G + H + G+
Sbjct: 411 AHQGHAKEALLLFDRM--SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 468
Query: 535 FLPNALLDMYVRCGRMKPAWN 555
++D+ R G + AW
Sbjct: 469 EHYTNIIDLLSRAGMLDEAWE 489
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 5/362 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS + K V + ++ + M+ K G +G+A +F ++ +RD SWN +I GY++
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ +A+ L+++M G +PD T +L C + DL+ G+ + I
Sbjct: 211 AGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + LI+MY KCGDL AR VF+ M K+DR++W AMI+ Y +NG+ + LF M +
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD TLS+V+SA VG +LG+++ + ++ ++ V L+ MY G EE
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M K+ +W MI+ Y +A+ + M P +IT VLSAC G
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAG 446
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G + H+++ GL+ I +ID+ S+ +D+A E + P K + I
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 506
Query: 473 LG 474
LG
Sbjct: 507 LG 508
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 182/417 (43%), Gaps = 50/417 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G + A+ M+E DE LV+++ C G L +
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
LS LG+ +SM+ K GDL A VF +M +D +W +I Y++ G EA L
Sbjct: 262 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD T VL CG V L+ GK++ H + ++ V L+ MY
Sbjct: 322 FFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF+ MP ++ +WNAMI+ Y G + L+LF M V P +T
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIG 437
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA VH ++ G C +M FG + ++E
Sbjct: 438 VLSAC-----------VHAGLVHQG-------CRYFHEMSSMFG-------LVPKIE--- 469
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+T +I + + D E ++ ME PDEI +A++L AC ++ + K +
Sbjct: 470 --HYTNIIDLLSRAGMLD---EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 524
Query: 424 LAMR----TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI-----SWTSI 471
+ M +Y+I +N L DM K D++ ++ + D+ V+ SW I
Sbjct: 525 MLMEMKEAKNAGNYVISSNVLADM----KMWDESAKMRALMRDRGVVKTPGCSWIEI 577
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 261/520 (50%), Gaps = 15/520 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ ++ L + + + + LV + C +EGL +H + ++ +
Sbjct: 129 GASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQ 188
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ LSM+ D+ A +F +MC+RD+ SW+V+IGGY + G AL L+ M +
Sbjct: 189 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASI 247
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D T VL+ C D+ G+ VH VI G + D+ V N++I MY KC D A
Sbjct: 248 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFK 307
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+ MP R+ +SWN++ISG ++ + L LF M + D +TL +++ + + D
Sbjct: 308 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 367
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ +H VI+ G+ + V N LI Y E K+F R+++KD VSW+ MI+
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 427
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ PD+A+ +Q M P+ +TI S+L A + +L H +A+R GL +
Sbjct: 428 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAE 487
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + ++DMY+KC I + + F QIP+KN++SW ++I +N + +AL +M L
Sbjct: 488 VAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKL 547
Query: 494 N-LKPNSVTLVSILSACARIGALMCG-----KEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+ LKPN VT +S+LSAC+ G + G + H + G+ + ++DM R
Sbjct: 548 HGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEH----YSCMVDMLSRA 603
Query: 548 GRMKPAWN---QFNSNERDVSA-WNILLTGYAERGQGALA 583
G++ A N + RD + W LL+ G L
Sbjct: 604 GKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLG 643
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 232/436 (53%), Gaps = 9/436 (2%)
Query: 161 LFSWNVLIGGYAKAGFFD--EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
L +WN+ I ++D EA S Y +M G D +L+ C +P ++ GK
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H +++ G+++ N+++ Y+K G L A VFD M RD +SWN MI G+ G
Sbjct: 71 IHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
KGL F R + +P+ TL I A +G + G ++HGY+I+ GF D SV N
Sbjct: 131 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNS 190
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ MY + E E++F M +DV+SW+ MI Y + A++ + M + S+
Sbjct: 191 LLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIEL 249
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D IT+ SVL ACA G++ +G +H + + GL + + N++IDMYSKC + A + F
Sbjct: 250 DGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAF 309
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACAR-IGAL 515
+++P +N +SW SII GL + EAL F M + + VTLV++L +C +
Sbjct: 310 NEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPF 369
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
C K IH+ +R G + F+ N+L+D Y +C ++ AW F+ +D +W+ ++ G+
Sbjct: 370 QC-KFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF 428
Query: 575 AERGQGALAEEFFRKM 590
G+ A F++M
Sbjct: 429 NHCGKPDEAIALFQEM 444
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 235/449 (52%), Gaps = 5/449 (1%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ L ++K G L A +VF M RD SWN++I G+ G D+ L + R V
Sbjct: 87 GNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF-RQARVIA 145
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P+V T + C + ++ G ++H ++IR G+ V N+L++MY D+ RA
Sbjct: 146 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 204
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELV 311
+FD M +RD ISW+ MI GY + GE L LF+ M ++ D +T+ SV+ A
Sbjct: 205 ELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANT 264
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD +GR VHG VI G D+ V N +I MY + E K F+ M ++ VSW ++I
Sbjct: 265 GDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSII 324
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + +A+ + M G DE+T+ ++L +C + +H + +R G
Sbjct: 325 SGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE 384
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N+LID YSKC I+ A ++F ++ K+ +SW+++I G + EA+ F++M
Sbjct: 385 LNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM 444
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
KPN VT++S+L A + L K H A+R G+A + + A+LDMY +CG +
Sbjct: 445 NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 504
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ F+ E+++ +W ++ G
Sbjct: 505 GLSRKAFDQIPEKNIVSWGAMIAACGMNG 533
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
T + NS ++ L +AL SM + DE LVNL++ C++ + ++HS
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 376
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+V + L+ + N+ + + K + AW +F ++ +D SW+ +I G+ G DE
Sbjct: 377 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 436
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A++L+Q M KP+ T +L DLKR K H IR G A+V V A++
Sbjct: 437 AIALFQEMN-QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAIL 495
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCG++ +R FD +P+++ +SW AMI+ NG L L M+ + P+ +
Sbjct: 496 DMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVV 555
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS 330
T SV+SA HG +++ G S
Sbjct: 556 TTLSVLSACS-----------HGGLVEEGLS 575
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 234/464 (50%), Gaps = 10/464 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + K G + A VF + +++SW +L+ YA+ G L L ++M +G V
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG-V 178
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI---RFGYEADVDVVNALITMYVKCGDLVR 250
P+ T V+ + D +++H + Y DV +V ALI MY KCGD+
Sbjct: 179 WPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTY--DVVLVTALIDMYAKCGDIFH 236
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +VFD +D NAMIS Y + G + + F ++ + P+ +T + + A
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G R H I DV V L+ MY G+ E+ +VF RM K+VV+W M
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVM 356
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y D+A++ Y MEA G PDEIT +VL +C+ +L G +H+ + G
Sbjct: 357 IAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGY 416
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQ--IPDKNVISWTSIILGLRLNNRSFEALIFF 488
S + + + LI MYS C + A++VFH+ +VISWT+++ L N AL F
Sbjct: 417 DSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALF 476
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
RKM L +K N VT VS + AC+ IGAL+ G I + G D L +L+++Y +C
Sbjct: 477 RKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKC 536
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ A F+ + +++ WN +L ++ G+ L+ E ++M
Sbjct: 537 GRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEM 580
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 227/445 (51%), Gaps = 5/445 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS-HLSVR 131
NG + L+ L M L + + L ++ +DE +H+ + T V
Sbjct: 160 NGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVV 219
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L A + M+ K GD+ HA VF + ++DL N +I Y + G+ +A+S + R+
Sbjct: 220 LVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRI-QPS 278
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P+ T+ + R C + H+ I DV V AL++MY +CG L A
Sbjct: 279 GLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDA 338
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD MP ++ ++WN MI+GY + G + L L++ M V+PD +T +V+ + L
Sbjct: 339 RRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLA 398
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTT 369
GR++H +V+ G+ ++V + LI MY + G+ + VF + V+SWT
Sbjct: 399 EHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTA 458
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ + A+ ++ M+ EG + +T S + AC+ +G L G + + + TG
Sbjct: 459 MLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTG 518
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ +++ +LI++Y KC +D ALEVFH + KN+++W +I+ N + +
Sbjct: 519 YLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQ 578
Query: 490 KMMLN-LKPNSVTLVSILSACARIG 513
+M L+ +PN +TL+++L C+ G
Sbjct: 579 EMDLDGAQPNEMTLLNMLFGCSHNG 603
>gi|302765755|ref|XP_002966298.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
gi|300165718|gb|EFJ32325.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
Length = 644
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 252/494 (51%), Gaps = 18/494 (3%)
Query: 109 RGYDEGLYLHSVVS--KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWN 165
R + G +H V S + R+G A L M+V+ G + A +F M +R+ W
Sbjct: 38 RMLEAGERIHCVASCLNLVESKRKRVGVALLGMYVRCGSIESARKLFDSMAVERNGECWT 97
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
V+I Y + G+ +EAL L+++ + GV+P TF +L C L +GK++H +
Sbjct: 98 VMISAYVRRGWINEALLLFKKSL-LEGVRPSEGTFIALLHACSRPASLDQGKKLHRLLEE 156
Query: 226 FGYEADV--DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
G++ + + +LI MY KCG L A V + + RD W MI+ G+ +
Sbjct: 157 AGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHFGKLDRAF 216
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV----HGYVIKMGFSDDVSVCNPL 339
L M P MT +V+ A + D R+V HG + + G DV V L
Sbjct: 217 ELLKRMDLEGDRPSKMTFMAVLRACK---DHPEARQVGGVLHGLIRERGLESDVGVGTSL 273
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY +G+ ++ ++VFS++E++DV SW +++ Y ++A+ Y+ M EG PD
Sbjct: 274 VNMYARWGDPQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDR 333
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T+ +V+ CA L +L+ G ++HQ +G S +++ LI Y +C +D ALE+F
Sbjct: 334 LTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDAALEIFEA 393
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+P ++ ++W ++I L ++ A+ FF++M + P+ VTL+++L C +G
Sbjct: 394 LPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGE---A 450
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDV-SAWNILLTGYAER 577
K +H+ G D + N L+ Y RCG + A F + R + S+WN ++ YA +
Sbjct: 451 KLVHSCVRESGFEQDSEVKNTLITAYGRCGGLAQAVEIFEALPRKIESSWNAMMGAYAAQ 510
Query: 578 GQGALAEEFFRKMI 591
G+ A E F +M+
Sbjct: 511 GKPRAALELFHRMV 524
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 235/492 (47%), Gaps = 12/492 (2%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKT--MSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
E + L+ C D+G LH ++ + ++ L + + M+ K G L AW V
Sbjct: 128 EGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKV 187
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
K+ RD+ W V+I + G D A L +RM + G +P TF VLR C P+
Sbjct: 188 MEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMD-LEGDRPSKMTFMAVLRACKDHPE 246
Query: 213 LKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G +H + G E+DV V +L+ MY + GD +A+ VF + RD SWN +++
Sbjct: 247 ARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDPQQAQEVFSQIEARDVSSWNCLLA 306
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y + L+L+ M V PD +TL++VI + D + G +H + GF+
Sbjct: 307 AYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFAS 366
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ + LI Y G + ++F + ++D V+W TMI+ P+ A+ +Q M+
Sbjct: 367 DLMLDTALITFYGRCGKLDAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQ 426
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG P +T+ +VL C +G L +H +G + NTLI Y +C +
Sbjct: 427 QEGMAPSRVTLLTVLGLCGSVGEAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLA 483
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
+A+E+F +P K SW +++ + AL F +M+ L +TLVS+LSAC+
Sbjct: 484 QAVEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPITLVSVLSACS 543
Query: 511 RIGALMCGKEIHAH-ALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQFNSNERDVSA-- 566
G L G +I A A GV + L +D+ R G+++ A S++ S+
Sbjct: 544 HAGLLHRGLQIFASTASDFGVQWRSLELYGCAIDLLGRAGQLQEAEMLVASSDFSGSSVL 603
Query: 567 WNILLTGYAERG 578
W LL RG
Sbjct: 604 WITLLGASKVRG 615
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 173/349 (49%), Gaps = 5/349 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLC-EWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G L++A + L M + + ++R C + G LH ++ + V +
Sbjct: 210 GKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGV 269
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + ++M+ ++GD A VF ++ RD+ SWN L+ Y++ ++AL LY+ M + G
Sbjct: 270 GTSLVNMYARWGDPQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMM-LEG 328
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD T V+ C + DL++G +H + G+ +D+ + ALIT Y +CG L A
Sbjct: 329 VKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDAAL 388
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +P RD ++WN MI+ ++ + F M++ + P +TL +V+ VG
Sbjct: 389 EIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVG 448
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ KL VH V + GF D V N LI Y G + ++F + K SW M+
Sbjct: 449 EAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLAQAVEIFEALPRKIESSWNAMMG 505
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
Y P A+E + M M IT+ SVLSAC+ G L G+++
Sbjct: 506 AYAAQGKPRAALELFHRMVKLEQMIQPITLVSVLSACSHAGLLHRGLQI 554
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 241/498 (48%), Gaps = 35/498 (7%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L VK G LG+A +F KM +D SW LI GY A EAL L++ M G+
Sbjct: 60 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 119
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D + + CG D+ G+ +H + ++ G V V +AL+ MY K G + R
Sbjct: 120 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 179
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF MP R+ +SW A+I+G G + L+ F M V+ D T + + A G
Sbjct: 180 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 239
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GRE+H +K GF V N L MY G E G +F +M +DVVSWTT+I+
Sbjct: 240 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITT 299
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ AV+ + M P+E T A+V+S CA L ++ G +LH L + GL +
Sbjct: 300 LVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAAS 359
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRK 490
+ + N+++ MY+KC + + +FH++ ++++SW++II G + +FE L + R
Sbjct: 360 LSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR- 418
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG----FLPNA-----LL 541
M KP L S+LSAC + L GK++HA+ L IG+ P+ ++
Sbjct: 419 -MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMI 477
Query: 542 DMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT-----GYAERGQGALAEEFFR------ 588
D+ R GR+ A + + RD W+ LL G ERG+ AE +
Sbjct: 478 DLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRT-AERILQLEPNCA 536
Query: 589 -------KMIDSKGNWRK 599
+ SKG WR+
Sbjct: 537 GTHITLANIYASKGKWRE 554
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 212/423 (50%), Gaps = 18/423 (4%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT-CGGVPDLKRGKEVHVHVIRFGYEADV 232
A +F +SL +R+F T P V T C + L+R + I F + D+
Sbjct: 7 AQYFINEISLGRRLF----------TAPAVASTECIDLQVLERSNDNLSQNIHFISQTDL 56
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-- 290
N + VK G L AR +FD M ++D ISW +ISGY + + L+LF MR
Sbjct: 57 PESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVE 116
Query: 291 -EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ +DP ++L+ A L D G +HGY +K G + V V + L+ MY G
Sbjct: 117 SGLRIDPFILSLAH--KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 174
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EG +VF M ++VVSWT +I+ + +A+ + M D T A L AC
Sbjct: 175 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 234
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A G L+ G ++H AM+ G +ANTL MY+KC ++ L +F ++ ++V+SWT
Sbjct: 235 ADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWT 294
Query: 470 SIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+II L ++ F R ++ PN T +++S CA + + G+++HA L +
Sbjct: 295 TIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL 354
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G+A + N+++ MY +CG++ + F+ RD+ +W+ ++ GY++ G + A E
Sbjct: 355 GLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELL 414
Query: 588 RKM 590
M
Sbjct: 415 SWM 417
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 239/522 (45%), Gaps = 36/522 (6%)
Query: 10 SQTPLRQNLRN-PKTRIPETSFYFKP--KTRHFSS------KNAQSVQVLNTQNTSSIAT 60
S L QN+ +T +PE++ K KT H + K +Q ++ T S
Sbjct: 40 SNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVN 99
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
N +S L N +E L+ +D L + C + G LH
Sbjct: 100 ANDSSEALLLFKNMRVESGLR-----------IDPFILSLAHKACGLNSDVNYGELLHGY 148
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
KT SV +G+A L M+ K G + VF +M R++ SW +I G +AG+ EA
Sbjct: 149 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEA 208
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M W V+ D YTF L+ C L G+E+H ++ G++ V N L T
Sbjct: 209 LVYFSEM-WRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLAT 267
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG L +F+ M RD +SW +I+ + G+ + FI MRE V P+ T
Sbjct: 268 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 327
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++VIS + + G ++H ++ +G + +SV N ++ MY G +F M
Sbjct: 328 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 387
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D+VSW+T+I+ Y +A E M EG P E +ASVLSAC + L+ G +
Sbjct: 388 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 447
Query: 421 LHQLAMRTGL----ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTS 470
LH + GL + Y I + +ID+ + + A + +P ++ + W++
Sbjct: 448 LHAYVLSIGLEHTAMKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWST 507
Query: 471 IILGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSA 508
++ R++ E + +L L+PN +TL +I ++
Sbjct: 508 LLRACRVHG-DVERGRRTAERILQLEPNCAGTHITLANIYAS 548
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 243/451 (53%), Gaps = 9/451 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + A L +++K G + +A F M RD+ SWN LI GY++ G+ AL L+ +M
Sbjct: 477 VYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLK 536
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+G P T +L +CG + + +GK +H I+ G D V NAL +MY KCGDL
Sbjct: 537 LG-FCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLE 595
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+ M + +SWN MI Y +NG + + + +F M V+ +T+ S+ SA+
Sbjct: 596 AAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANA 655
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+H Y IK+G +DD SV LI MY +G+ + E ++ + K++VS T
Sbjct: 656 NP------ESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTA 709
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I+ Y + +E++ M PD + + S+L A ++ +G H A+++G
Sbjct: 710 IITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSG 769
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L ++ ++ N LI MYSK ++ +F + +K +ISW S+I G R+ A+ F
Sbjct: 770 LDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFC 829
Query: 490 KM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M M P+++T+ S+LS C+++G L G+ +H++ LR + + F+ AL+ MY +CG
Sbjct: 830 QMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCG 889
Query: 549 RMKPAWNQFNSNERD-VSAWNILLTGYAERG 578
+ A F S + ++ WN +++GY+ G
Sbjct: 890 SIVHAERVFKSIGKPCLATWNAMISGYSCYG 920
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 218/449 (48%), Gaps = 10/449 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL+ M +L C + LV L+ C +G +H K+ HL ++
Sbjct: 521 NGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQV 580
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA SM+ K GDL A Y+F +M D+ + SWN +IG Y + GFFDEA+ +++RM G
Sbjct: 581 KNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGV 640
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V T +P E +H + I+ G D VV +LI MY + G A
Sbjct: 641 EVSQV--------TIMSLPSANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHA 692
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
L++ +P+++ +S A+I+ Y E G + F M ++ + PD + + S++
Sbjct: 693 ELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADP 752
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+G HGY IK G V N LI MY F N E +FS M K ++SW ++I
Sbjct: 753 VHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVI 812
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + A+E + M+ G PD ITIAS+LS C+ LG L G +LH +R L
Sbjct: 813 SGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLE 872
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ LI MY+KC I A VF I + +W ++I G +AL + +M
Sbjct: 873 MEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEM 932
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGK 519
++P+ +T + +L+AC G + G+
Sbjct: 933 QEQGVEPDKITFLGVLAACTHGGLIHEGR 961
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 189/375 (50%), Gaps = 8/375 (2%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++ H+I+ G + V V AL+ +Y+K G + A FD MP RD +SWNA+I GY NG
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
L LF+ M ++ P TL ++ + + G+ +HG+ IK G D V N
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L MY G+ E E +F M K VVSW TMI Y + D+A+ ++ M G
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
++TI S+ SA A N + +H ++ GL + +LI MY++ D A ++
Sbjct: 643 SQVTIMSLPSANA---NPE---SIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696
Query: 458 HQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALM 516
+P KN++S T+II N F + LN+KP+SV ++SIL A +
Sbjct: 697 WSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHIC 756
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G H +A++ G+ + N L+ MY + ++ + F+ +E+ + +WN +++G
Sbjct: 757 IGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCV 816
Query: 576 ERGQGALAEEFFRKM 590
+ G+ + A E F +M
Sbjct: 817 QAGRASHAIELFCQM 831
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 33/375 (8%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ + M+ ++G HA ++ + ++L S +I YA+AG + + +M + +K
Sbjct: 678 SLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLN-MK 736
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD +L + G H + I+ G + V N LI+MY K ++ +
Sbjct: 737 PDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGL 796
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F GM ++ ISWN++ISG + G + LF M+ +PD +T++S++S +G
Sbjct: 797 FSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYL 856
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G +H Y+++ + V LI MY G+ E+VF + + +W MIS Y
Sbjct: 857 QFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGY 916
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
KA+ Y M+ +G PD+IT VL+AC G + G + Q+ +
Sbjct: 917 SCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKV------ 970
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++ C C ++GL FE + F K M
Sbjct: 971 ---YDMVPTLQHCAC----------------------MVGLLARVGLFEEALLFIKNM-E 1004
Query: 495 LKPNSVTLVSILSAC 509
+P+S + LSAC
Sbjct: 1005 KEPDSAVWGAFLSAC 1019
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
I++ ++ G+ ++ ++ L+D+Y K + A F +P ++V+SW ++I G N
Sbjct: 462 IQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRN 521
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
F AL F +M+ L P TLV +L +C ++ + GK IH ++ G+ D +
Sbjct: 522 GYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVK 581
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
NAL MY +CG ++ A F ++ V +WN ++ Y + G A F++MI +
Sbjct: 582 NALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGA 638
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 7/212 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVVS 122
NS ++ G A++ M+ D + +L+ C + GY + G LHS +
Sbjct: 809 NSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCS-QLGYLQFGERLHSYIL 867
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ + +G A + M+ K G + HA VF + L +WN +I GY+ GF +AL+
Sbjct: 868 RNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALT 927
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
Y M GV+PD TF VL C GG+ R + + + + ++
Sbjct: 928 CYSEM-QEQGVEPDKITFLGVLAACTHGGLIHEGR-RYFQIMTKVYDMVPTLQHCACMVG 985
Query: 241 MYVKCGDLVRARLVFDGMPKR-DRISWNAMIS 271
+ + G A L M K D W A +S
Sbjct: 986 LLARVGLFEEALLFIKNMEKEPDSAVWGAFLS 1017
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 232/441 (52%), Gaps = 6/441 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-G 175
L + ++ + H SV N + V+ GD ++ ++F + + +S+N +I G
Sbjct: 49 LRQIQAQMLLH-SVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWN 107
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ ALSLY+RM + G+KPD +T+ V C + ++ G+ VH + + G E DV +
Sbjct: 108 DHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 166
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
++LI MY KCG + AR +FD + +RD +SWN+MISGY E G + LF M E +
Sbjct: 167 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 226
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD TL S++ A +GD + GR + I + + LI MY G+ + +V
Sbjct: 227 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 286
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F++M KD V+WT MI+ Y + +A + + ME G PD T+++VLSAC +G L
Sbjct: 287 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 346
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++ A L I +A L+DMY KC +++AL VF +P KN +W ++I
Sbjct: 347 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 406
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDG 534
+ EAL+ F +M ++ P+ +T + +LSAC G + G + H + G+
Sbjct: 407 AHQGHAKEALLLFDRM--SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 464
Query: 535 FLPNALLDMYVRCGRMKPAWN 555
++D+ R G + AW
Sbjct: 465 EHYTNIIDLLSRAGMLDEAWE 485
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 5/362 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS + K V + ++ + M+ K G +G+A +F ++ +RD SWN +I GY++
Sbjct: 147 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 206
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ +A+ L+++M G +PD T +L C + DL+ G+ + I
Sbjct: 207 AGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 265
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + LI+MY KCGDL AR VF+ M K+DR++W AMI+ Y +NG+ + LF M +
Sbjct: 266 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 325
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD TLS+V+SA VG +LG+++ + ++ ++ V L+ MY G EE
Sbjct: 326 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 385
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M K+ +W MI+ Y +A+ + M P +IT VLSAC G
Sbjct: 386 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAG 442
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G + H+++ GL+ I +ID+ S+ +D+A E + P K + I
Sbjct: 443 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 502
Query: 473 LG 474
LG
Sbjct: 503 LG 504
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 182/417 (43%), Gaps = 50/417 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G + A+ M+E DE LV+++ C G L +
Sbjct: 198 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 257
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
LS LG+ +SM+ K GDL A VF +M +D +W +I Y++ G EA L
Sbjct: 258 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 317
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD T VL CG V L+ GK++ H + ++ V L+ MY
Sbjct: 318 FFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 376
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF+ MP ++ +WNAMI+ Y G + L+LF M V P +T
Sbjct: 377 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIG 433
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA VH ++ G C +M FG + ++E
Sbjct: 434 VLSAC-----------VHAGLVHQG-------CRYFHEMSSMFG-------LVPKIE--- 465
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+T +I + + D E ++ ME PDEI +A++L AC ++ + K +
Sbjct: 466 --HYTNIIDLLSRAGMLD---EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 520
Query: 424 LAMR----TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI-----SWTSI 471
+ M +Y+I +N L DM K D++ ++ + D+ V+ SW I
Sbjct: 521 MLMEMKEAKNAGNYVISSNVLADM----KMWDESAKMRALMRDRGVVKTPGCSWIEI 573
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 271/528 (51%), Gaps = 11/528 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+L L + + + + +V +++ C +GL LH + K+ +
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ LSM+V D+ A +F +M ++D+ +W+V+IGGY + L ++++M V G
Sbjct: 187 QNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPG 245
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD VL+ C D+ G+ VH VI G++ D+ V N+LI MY KC D A
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + +R+ +SWN+M+SG+ N Y + L MR+ V+ D +TL +++ +
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +H +I+ G + V + LI Y E +VF+RM +DVVSW+TMIS
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ PD+A+ YQ M+ + P+ ITI ++L AC+ L H +A+R G S
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + ++DMYSKC I + F Q+ KN+++W+++I +N + EAL F +M
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMK 545
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMYVRCG 548
+ LKPN VT +S+L+AC+ G + G + L + F+ + + ++DM R G
Sbjct: 546 RHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLGRAG 603
Query: 549 RMKPAWNQFNSNERDV----SAWNILLTGYAERGQGALAEEFFRKMID 592
++ A + ++ S W LL+ G L +E ++++
Sbjct: 604 KLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLE 651
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 234/455 (51%), Gaps = 12/455 (2%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L +W + I + G + E +S Y + G DV FP +L+ + + GK +H
Sbjct: 12 LPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLH 70
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEY 279
+I+ G+++ + N+++ Y++CGD A VF+ M + RD +SWN +I G+ +NG
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ GL F R +P+ T+ VI A ++G + G +HGY+IK GF SV N L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPD 398
+ MY+ + E ++F M KDV++W+ MI Y P ++ + +M+ G PD
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ + SVL ACA ++ G +H L + G + + N+LIDMYSKCK A +VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+I +N +SW S++ G LN EA M ++ + VTLV+IL C
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
K IH +R G + + +AL+D Y +C ++ AW F RDV +W+ +++G+A
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429
Query: 577 RGQG----ALAEEFFRKMIDSKGNWRKLMGLFRKC 607
G+ A+ +E R ++ K N ++ L C
Sbjct: 430 CGKPDEAIAVYQEMDRDLV--KPNVITIINLLEAC 462
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 274/548 (50%), Gaps = 28/548 (5%)
Query: 59 ATKNPN--SRLNELCLNGSLEQALKYLDSMQELNI-CVDEDALVNLVRLCEWK-RGYDEG 114
+K PN R+ E NG ++ + + +++ I VD +++ W + G
Sbjct: 9 GSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILK--AWSFLSHRHG 66
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAK 173
LH+ + K +GN+ + +++ GD A VF M RD SWN+LI G+
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 174 AGFFDEALSLYQRMFW-----VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G +L ++W V G +P++ T V++ C + G +H ++I+ G+
Sbjct: 127 NG------ALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
A V N+L++MYV D+ AR +FD M ++D I+W+ MI GY + E GL +F
Sbjct: 181 WAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRK 239
Query: 289 MREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V ++PD + + SV+ A D GR VHG VI GF D+ V N LI MY
Sbjct: 240 MVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCK 299
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIAS 404
+ KVF+ + ++ VSW +M+S G VL + E + M E DE+T+ +
Sbjct: 300 DAGSAFKVFNEISQRNNVSWNSMLS---GFVLNENYSEAQSLISSMRKERVETDEVTLVN 356
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L C + +H + +R G + ++ + LID Y+KC I+ A EVF ++ ++
Sbjct: 357 ILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRD 416
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHA 523
V+SW+++I G + EA+ +++M +L KPN +T++++L AC+ L K H
Sbjct: 417 VVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHG 476
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
A+R G A + + A++DMY +CG + + F+ +++ W+ ++ Y G
Sbjct: 477 VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHE 536
Query: 583 AEEFFRKM 590
A F +M
Sbjct: 537 ALALFAEM 544
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 143/267 (53%), Gaps = 12/267 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ LN + +A + SM++ + DE LVN++++C++ +H V+ +
Sbjct: 320 NSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIR 379
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
S + + +A + + K + AW VF +M RD+ SW+ +I G+A G DEA+++
Sbjct: 380 RGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAV 439
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
YQ M VKP+V T +L C +LKR K H IR G+ ++V V A++ MY
Sbjct: 440 YQEMD-RDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYS 498
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+++ +R FD + ++ ++W+AMI+ Y NG + L LF M+ + P+ +T S
Sbjct: 499 KCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLS 558
Query: 304 VISASELVGDEKLGREVHGYVIKMGFS 330
V++A HG +++ G S
Sbjct: 559 VLAACS-----------HGGLVEEGLS 574
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 233/438 (53%), Gaps = 7/438 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K SHL L + ++ + G + HA+ +F ++F WN +I ++
Sbjct: 23 LHASILK--SHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPH 80
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L LY RM +G ++ +TFP +L+ CG + D + G H HV+ FGYE+DV V N
Sbjct: 81 SRNSLRLYSRMLQLG-IQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVAN 139
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY + G +R VF+ MP+R+ +SW++M+ Y NG Y +GL+LF M + P
Sbjct: 140 SLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAP 199
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ S+++A + E + VI G D SV N + MY G + + F
Sbjct: 200 N---RGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFF 256
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ KD+V+WT+MI Y + LP A+E ++ M+ G +PD +T+ S++ A + L +
Sbjct: 257 YGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQ 316
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
L +H + R+ ++I + +ID+Y KC ++ A + F ++ +N+ISW+++I G
Sbjct: 317 LARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYG 376
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGF 535
++ EAL F +M ++KP+ + V +LSAC+ G + G E A GV
Sbjct: 377 MHGHGREALCLFDQMKASIKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTE 436
Query: 536 LPNALLDMYVRCGRMKPA 553
++D+ R GR+ A
Sbjct: 437 HYACMVDLLGRAGRLSEA 454
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 5/356 (1%)
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+LI Y G + A +F + WN +I + L L+ M ++ +
Sbjct: 39 SLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQA 98
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T ++ A + D +LG H +V+ G+ DV V N L+ MY FG + +VF
Sbjct: 99 TNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVF 158
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
RM ++VVSW++M+ Y + ++ + + M EG P+ S+++A AC+
Sbjct: 159 ERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNR---GSIVNAMACIHREH 215
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
++ + GL S + N + MY++C ID A F+ I DK++++WTS+I
Sbjct: 216 EADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYV 275
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ AL F++M +L + P+SVTL+S++ A + + + + +H R
Sbjct: 276 QADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIA 335
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L A++D+YV+CG ++ A F+ + R++ +W+ +++GY G G A F +M
Sbjct: 336 LDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM 391
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 167/340 (49%), Gaps = 13/340 (3%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+L+ M +L I L++ C ++ G H+ V V + N+ +
Sbjct: 83 NSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLM 142
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD- 196
+M+ +FG + VF +M +R++ SW+ ++G YA G ++E L L+ RM G+ P+
Sbjct: 143 AMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRML-NEGIAPNR 201
Query: 197 ---VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
V C+ R + VI G ++D V NA + MY +CG + AR
Sbjct: 202 GSIVNAMACIHRE-------HEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARR 254
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F G+ +D ++W +MI Y + + L LF M+ + + PD +TL S+I A +
Sbjct: 255 FFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLAS 314
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+L R VHG + + F + +++ +I +Y+ GN E K F RM +++++SW+TMIS
Sbjct: 315 FQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISG 374
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
Y +A+ + M+A PD I VLSAC+ G
Sbjct: 375 YGMHGHGREALCLFDQMKAS-IKPDHIAFVMVLSACSHGG 413
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL+ M+ L I D L++L+ + ++H V++++ + L A +
Sbjct: 282 NALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVI 341
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++VK G+L +A F +M R+L SW+ +I GY G EAL L+ +M +KPD
Sbjct: 342 DLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM--KASIKPDH 399
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFD 256
F VL C + G E + R FG + ++ + + G L A+ +
Sbjct: 400 IAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIE 459
Query: 257 GMP-KRDRISWNAMI 270
MP D W A++
Sbjct: 460 RMPITPDAGVWGALL 474
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 267/527 (50%), Gaps = 46/527 (8%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ + M + L +++ C D+G H + K ++ + NA L
Sbjct: 123 EALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALL 182
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G + A +F M + S+ ++GG +AG D+AL L+ RM GV+ D
Sbjct: 183 GMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCR-SGVRVDP 241
Query: 198 YTFPCVLRTCGG--------VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
VL +C V + G+ +H ++R G+ +D V N+LI MY KC +
Sbjct: 242 VAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMD 301
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VFD +P +SWN +I+G+ + G Y K L + +M E +P+ +T S+++++
Sbjct: 302 EAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCI 361
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D R +F ++ V +W T
Sbjct: 362 KARDVLSAR-----------------------------------AMFDKISRPSVTTWNT 386
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++S Y L VE ++ M+ + PD T+A +LS+C+ LG LDLG ++H ++R
Sbjct: 387 LLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFL 446
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L + + +A+ L+DMYSKC I A +F+++ +++V+ W S+I GL +++ + EA FF+
Sbjct: 447 LHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFK 506
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M N + P + S++++CAR+ ++ G++IHA ++ G + ++ +AL+DMY +CG
Sbjct: 507 QMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCG 566
Query: 549 RMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
M A F+ +++ AWN ++ GYA+ G G A + F M+ ++
Sbjct: 567 NMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTE 613
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 235/473 (49%), Gaps = 49/473 (10%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LS + GDL A + +M DR++ SWN +I A++ EAL LY+ M G V
Sbjct: 78 NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P +T VL CG V L G+ H ++ G + ++ V NAL+ MY KCG + A
Sbjct: 138 -PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVR 196
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS------A 307
+FDGM + +S+ AM+ G + G L LF M V D + +SSV+ A
Sbjct: 197 LFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACA 256
Query: 308 SE--LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SE +V +LG+ +H +++ GF D V N LI MY +E KVF + + V
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTV 316
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +I+ + + KA+E +ME GS P+E+T +++L++C
Sbjct: 317 SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCI--------------- 361
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
K + + A +F +I +V +W +++ G + +
Sbjct: 362 --------------------KARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTV 401
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR+M N++P+ TL ILS+C+R+G L G ++H+ ++R + D F+ + L+DMY
Sbjct: 402 ELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMY 461
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
+CG++ A FN ERDV WN +++G A A +FF++M +GN
Sbjct: 462 SKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQM---RGN 511
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 213/449 (47%), Gaps = 45/449 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK--------RGYDEGLYLHSVVSKTM 125
GS++ AL+ M + VD A+ +++ C R + G +H+++ +
Sbjct: 220 GSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKG 279
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+GN+ + M+ K + A VF + + SWN+LI G+ +AG + +AL +
Sbjct: 280 FGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLN 339
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M G +P+ T+ +L +C +K
Sbjct: 340 LM-EESGSEPNEVTYSNMLASC-----------------------------------IKA 363
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
D++ AR +FD + + +WN ++SGY + + + LF M+ V PD TL+ ++
Sbjct: 364 RDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVIL 423
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S+ +G LG +VH ++ +D+ V + L+ MY G +F+RM +DVV
Sbjct: 424 SSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVV 483
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W +MIS L ++A + ++ M G MP E + AS++++CA L ++ G ++H
Sbjct: 484 CWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQI 543
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ G + + + LIDMY+KC +D A F + KN+++W +I G N +A+
Sbjct: 544 VKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAV 603
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIG 513
F M+ +P+ VT +++L+ C+ G
Sbjct: 604 DLFEYMLTTEQRPDGVTFIAVLTGCSHSG 632
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 1/284 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ +K D+ A +F K+ + +WN L+ GY + + + L++RM V+P
Sbjct: 356 MLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRM-QHQNVQP 414
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T +L +C + L G +VH +RF D+ V + L+ MY KCG + AR++F
Sbjct: 415 DRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIF 474
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ M +RD + WN+MISG + + F MR + P + +S+I++ +
Sbjct: 475 NRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVP 534
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR++H ++K G+ +V V + LI MY GN ++ F M +K++V+W MI Y
Sbjct: 535 QGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYA 594
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+ +KAV+ ++ M PD +T +VL+ C+ G +D I
Sbjct: 595 QNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAI 638
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 3/256 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C + ++ MQ N+ D L ++ C D G +HS +
Sbjct: 385 NTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVR 444
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ H + + + + M+ K G +G A +F +M +RD+ WN +I G A +EA
Sbjct: 445 FLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDF 504
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M G+ P ++ ++ +C + + +G+++H +++ GY+ +V V +ALI MY
Sbjct: 505 FKQMRG-NGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYA 563
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ AR+ FD M ++ ++WN MI GY +NG K + LF M PD +T +
Sbjct: 564 KCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIA 623
Query: 304 VISASELVG--DEKLG 317
V++ G DE +
Sbjct: 624 VLTGCSHSGLVDEAIA 639
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L ++ E+A + M+ + E + +++ C +G +H+ + K
Sbjct: 486 NSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVK 545
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V +G+A + M+ K G++ A F M +++ +WN +I GYA+ GF ++A+ L
Sbjct: 546 DGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDL 605
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ M +PD TF VL C G+ D + + +G + LI
Sbjct: 606 FEYMLTTEQ-RPDGVTFIAVLTGCSHSGLVD-EAIAFFNSMESTYGITPLAEHYTCLIDG 663
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ G LV + D MP K D I W +++
Sbjct: 664 LGRAGRLVEVEALIDNMPCKDDPIVWEVLLAA 695
>gi|255582516|ref|XP_002532043.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528286|gb|EEF30333.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 468
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 230/418 (55%), Gaps = 5/418 (1%)
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+A+SL+ R G++P+ +TFP +L+ C + +L + +H HVI+ + ++V V AL
Sbjct: 21 KAISLF-RQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQTAL 79
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ M VKC L A VF MPKRD SWNAM+ G+ + G + +F MR V PD
Sbjct: 80 LDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPDS 139
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+TL V A + D +L + VH + I++G +DVSV N I +Y + E VF+
Sbjct: 140 VTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWISLYAKCYDLAMAESVFNG 199
Query: 359 MES--KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+E + VVSW +MI+ Y A+ +Y+ M +G MPD TI ++LS+C +
Sbjct: 200 IEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPDISTIVTLLSSCLQPEAVR 259
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G+++H +R G S I +ANTLI MYSK + A +F + +++ ++WTS+I G
Sbjct: 260 QGMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFDSMCNRSCVTWTSMISGYA 319
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
EAL F M KP+ VT++S++S C + G L GK IH +A + +
Sbjct: 320 EKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGKWIHVYADSNCLKHNVV 379
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ NAL+DMY +CG + AW+ FN+ +R V W ++ G A G + + F +MID
Sbjct: 380 VCNALIDMYAKCGSIDDAWDLFNTMPDRTVVTWTTMIAGCALNGLFKESLDLFYQMID 437
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 226/438 (51%), Gaps = 4/438 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS++ E +A+ +++ I + +++ C +H+ V K
Sbjct: 7 NSQIREAVNQNCAHKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIK 66
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +V + A L M VK L A+ VF KM RD+ SWN ++ G+A+ GF + +
Sbjct: 67 SPFYSNVFVQTALLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCM 126
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M + GV PD T V + DL+ K VH IR G DV V N I++Y
Sbjct: 127 FREMRF-AGVFPDSVTLMGVSGAISCMKDLELAKSVHSFGIRIGIHNDVSVANTWISLYA 185
Query: 244 KCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
KC DL A VF+G+ R +SWN+MI+GY + + L + M PD T+
Sbjct: 186 KCYDLAMAESVFNGIEVGLRSVVSWNSMIAGYAYLEKRIDALNSYKRMLHDGFMPDISTI 245
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+++S+ + G +VH + I+ G ++ V N LI MY FG+ +F M +
Sbjct: 246 VTLLSSCLQPEAVRQGMQVHSHGIRFGCDSEIHVANTLISMYSKFGDVYSARCLFDSMCN 305
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V+WT+MIS Y D+A++ + MEA G PD +T+ SV+S C G L++G +
Sbjct: 306 RSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGKWI 365
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A L +++ N LIDMY+KC ID A ++F+ +PD+ V++WT++I G LN
Sbjct: 366 HVYADSNCLKHNVVVCNALIDMYAKCGSIDDAWDLFNTMPDRTVVTWTTMIAGCALNGLF 425
Query: 482 FEALIFFRKMM-LNLKPN 498
E+L F +M+ LKPN
Sbjct: 426 KESLDLFYQMIDFGLKPN 443
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 479 NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
N + +A+ FR++ ++PN+ T IL ACA++ L + IH H ++ + F+
Sbjct: 17 NCAHKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPFYSNVFVQ 76
Query: 538 NALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
ALLDM V+C ++ A+N F +RDV++WN +L G+A+ G FR+M
Sbjct: 77 TALLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREM 130
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 208/382 (54%), Gaps = 12/382 (3%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+HVH ++ G+E+ + V NALI MY CG L A+ +FDGM RD +SWN +I GY + +
Sbjct: 46 IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y + L LF M + D +T+ +I A +GD + + Y+ + DV + N
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI MY GN K+F M +DV+SWT+MI+ Y + AV+ +Q M A PD
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPD 225
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
++T+ASVLSACA LG LD+G +H R G+ + I + N+LIDMY KC ++KALEVFH
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFH 285
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
++ DK+ +SWTS+I GL +N + AL F +M+ ++P T V IL ACA G +
Sbjct: 286 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 345
Query: 518 GKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNIL 570
G E + G +P ++D+ R G + A+ DV W IL
Sbjct: 346 GLEYFESMESV----HGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRIL 401
Query: 571 LTGYAERGQGALAEEFFRKMID 592
L+ G LAE +++++
Sbjct: 402 LSACKLHGNVVLAEIATKRLLE 423
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 12/389 (3%)
Query: 119 SVVSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
S +S ++ +++LG NA + M+ G LG A +F M DRDL SWN LI G
Sbjct: 40 STISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICG 99
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y++ + E L L+ M +K D T ++ C + D + + ++ E
Sbjct: 100 YSQYNKYKEVLRLFDAMT-AANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEI 158
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV + N LI MY + G+L AR +FD MPKRD ISW +MI+GY + ++ + LF M
Sbjct: 159 DVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMM 218
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD +T++SV+SA +G +G VH Y+ + G D+ V N LI MY G E
Sbjct: 219 AAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVE 278
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +VF RM+ KD VSWT++IS + + A++ + M EG P T +L ACA
Sbjct: 279 KALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACA 338
Query: 411 CLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISW 468
G ++ G++ + GL+ + ++D+ S+ IDKA E ++P +V+ W
Sbjct: 339 HAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVW 398
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++ +L+ A I ++ +L L P
Sbjct: 399 RILLSACKLHGNVVLAEIATKR-LLELDP 426
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 159/303 (52%), Gaps = 9/303 (2%)
Query: 298 FMTLSSVISASELV-------GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ LSS I+ + LV + +H + +K+GF + V N LI MY G
Sbjct: 17 IVALSSTIAPAALVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLG 76
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+K+F M +D+VSW T+I Y + + + M A D +T+ ++ AC+
Sbjct: 77 FAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACS 136
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG+ + + + L + + NTLIDMY + + A ++F +P ++VISWTS
Sbjct: 137 HLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTS 196
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G ++ +A+ F++MM +KP+ VT+ S+LSACA +G L G +H + R G
Sbjct: 197 MITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHG 256
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
V D ++ N+L+DMY +CG ++ A F+ ++D +W +++G A G A + F
Sbjct: 257 VQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFS 316
Query: 589 KMI 591
+M+
Sbjct: 317 QML 319
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 15/304 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++ L+ D+M NI D +V ++ C ++ + + + + V LGN
Sbjct: 107 KEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTL 166
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ + G+L A +F M RD+ SW +I GY++A F +A+ L+Q M VKPD
Sbjct: 167 IDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMM-AAKVKPD 225
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL C + L G VH ++ R G +AD+ V N+LI MY KCG + +A VF
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFH 285
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +D +SW ++ISG NG L LF M V P T ++ A G
Sbjct: 286 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 345
Query: 317 GRE-------VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWT 368
G E VHG V M V + + GN ++ + +M DVV W
Sbjct: 346 GLEYFESMESVHGLVPAMKHYGCV------VDLLSRSGNIDKAYEFIKKMPIVPDVVVWR 399
Query: 369 TMIS 372
++S
Sbjct: 400 ILLS 403
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 5/199 (2%)
Query: 401 TIASVLSACACLGNLD---LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
TIA A N++ + +H A++ G SY+ ++N LI MY+ C + A ++F
Sbjct: 23 TIAPAALVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMF 82
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALM 516
+ D++++SW ++I G N+ E L F M N+K ++VT+V I+ AC+ +G
Sbjct: 83 DGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE 142
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYA 575
+ + + D +L N L+DMY R G + A F N +RDV +W ++TGY+
Sbjct: 143 FADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYS 202
Query: 576 ERGQGALAEEFFRKMIDSK 594
+ Q + A + F++M+ +K
Sbjct: 203 QASQFSDAVKLFQEMMAAK 221
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 166/582 (28%), Positives = 273/582 (46%), Gaps = 76/582 (13%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++ + C ++ G H+ + T +V + N + M++K DLG A+ VF M R
Sbjct: 47 HIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQR 106
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG--------------GVKPDVYTFPCVLR 205
D SWN ++ GYA G A L+ M G G D TF VL+
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLK 166
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---GDLVRARL--------- 253
+C + D G ++H ++ G++ DV +AL+ MY KC D +R L
Sbjct: 167 SCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKA 226
Query: 254 ------------------------------------------VFDGMPKRDRISWNAMIS 271
+F+ +P + S+NA+I
Sbjct: 227 GVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIV 286
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
GY + + ++ L +F ++++ + D ++LS A ++ + G +VHG +K
Sbjct: 287 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQS 346
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
++ V N ++ MY G E VF M S+D VSW +I+ +E + +K + + M
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 406
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGLISYIIIANTLIDMYSKCKC 449
G PDE T SVL ACA L+ G+++H + R GL S++ IA LIDMYSKC
Sbjct: 407 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA--LIDMYSKCGM 464
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
++KA ++ ++ ++ V+SW +II G L +S EA F KM+ + + P++ T +IL
Sbjct: 465 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 524
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
CA + + GK+IHA ++ + D ++ + L+DMY +CG M+ F + RD W
Sbjct: 525 CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTW 584
Query: 568 NILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
N ++ GYA+ G G A + F M + K N + + R C
Sbjct: 585 NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 626
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 251/502 (50%), Gaps = 11/502 (2%)
Query: 92 CVDEDALVNLVRLC-EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH-A 149
CV D L + L E ++ L LH KT V +G A L M++K +L +
Sbjct: 207 CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS 266
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
+F + + +L S+N +I GYA++ EAL ++ R+ G+ D + R C
Sbjct: 267 NQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF-RLLQKSGLGLDEVSLSGAXRACAV 325
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ G +VH ++ ++++ V NA++ MY KCG LV A LVF+ M RD +SWNA+
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+ + +NG K L LF+ M + ++PD T SV+ A G E+H +IK
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM 445
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
D V LI MY G E+ EK+ R+ + VVSW +IS + ++A +T+
Sbjct: 446 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 505
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M G PD T A++L CA L ++LG ++H ++ L S I++TL+DMYSKC
Sbjct: 506 MLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGN 565
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+ +F + P+++ ++W +++ G + EAL F M L N+KPN T +++L A
Sbjct: 566 MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRA 625
Query: 509 CARIGALMCGKEIHA-HALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERD 563
C +G + K +H H++ D L + ++D+ R G++ A E D
Sbjct: 626 CGHMG--LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEAD 683
Query: 564 VSAWNILLTGYAERGQGALAEE 585
W LL+ G +AE+
Sbjct: 684 AVIWRTLLSXCKIHGNVEVAEK 705
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 208/397 (52%), Gaps = 3/397 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL +Q+ + +DE +L R C +G EGL +H + K++ ++ + NA L
Sbjct: 296 EALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 355
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A VF +M RD SWN +I + + G ++ LSL+ M G++PD
Sbjct: 356 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ-SGMEPDE 414
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+T+ VL+ C G L G E+H +I+ D V ALI MY KCG + +A + D
Sbjct: 415 FTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDR 474
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ ++ +SWNA+ISG+ + + F M E+ VDPD T ++++ + +LG
Sbjct: 475 LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 534
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+++H +IK D + + L+ MY GN ++ + +F + ++D V+W M+ Y
Sbjct: 535 KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH 594
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIII 436
L ++A++ ++ M+ E P+ T +VL AC +G ++ G+ H + GL +
Sbjct: 595 GLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEH 654
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ ++D+ + + KALE+ +P + + + W +++
Sbjct: 655 YSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 219/466 (46%), Gaps = 73/466 (15%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF + + C L GK+ H +I ++ V V N LI MY+KC DL A VFDGM
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREV------LVD---------PDFMTLSS 303
P+RD +SWNAM+ GY G+ LF M L D D T +
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY----LSFGNREEGEKVFSRM 359
V+ + + D G ++HG +KMGF DV + L+ MY + + G ++F M
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 360 E------------------SKDVVSWTTMISCYE-------------------------- 375
+ DVV T + Y
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 376 ---GSVLPDKAVET---YQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRT 428
G DK +E +++++ G DE++++ ACA + G+L+ G+++H L+M++
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKS 342
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
S I +AN ++DMY KC + +A VF ++ ++ +SW +II N + L F
Sbjct: 343 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 402
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M+ + ++P+ T S+L ACA AL CG EIH ++ + D F+ AL+DMY +C
Sbjct: 403 VWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKC 462
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G M+ A + E+ V +WN +++G++ + Q A++ F KM++
Sbjct: 463 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLE 508
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 164/328 (50%), Gaps = 6/328 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ E+ L M + + DE ++++ C + + G+ +H+ + K+ L +
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFV 451
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + M+ K G + A + ++ ++ + SWN +I G++ +EA + +M + G
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM-G 510
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD +T+ +L TC + ++ GK++H +I+ ++D + + L+ MY KCG++ +
Sbjct: 511 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQ 570
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F+ P RD ++WNAM+ GY ++G + L +F M+ V P+ T +V+ A +G
Sbjct: 571 LIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 630
Query: 313 -DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTM 370
EK H + G + + ++ + G + ++ M D V W T+
Sbjct: 631 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTL 690
Query: 371 ISC--YEGSV-LPDKAVETYQMMEAEGS 395
+S G+V + +KA + +E E S
Sbjct: 691 LSXCKIHGNVEVAEKAAYSILQLEPEDS 718
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L E+A K M E+ + D ++ C + G +H+ + K
Sbjct: 484 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 543
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + M+ K G++ +F K +RD +WN ++ GYA+ G +EAL +
Sbjct: 544 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 603
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMY 242
++ M + VKP+ TF VLR CG + +++G H + +G + ++ + ++ +
Sbjct: 604 FEYM-QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIM 662
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMIS 271
+ G + +A + +GMP + D + W ++S
Sbjct: 663 GRSGQVSKALELIEGMPFEADAVIWRTLLS 692
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 268/523 (51%), Gaps = 22/523 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCE----WKRGYDEGLYLHSVVSKT-MSHLSVR 131
E+A++ + L + ++ D+ V L+ C G +G +H +T ++ V
Sbjct: 234 EEAVEVFKETRHL-VDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVA 292
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN ++M+ K GD+ HA VFG M D+D SWN +I G + F++A+ Y M
Sbjct: 293 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT- 351
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ P +T L +C + + G++ H I+ G + DV V N L+ +Y + G L
Sbjct: 352 GLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAEC 411
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYM-KGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+ VF M +RD++SWN +I ++G + + + +F+ M P+ +T ++++
Sbjct: 412 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 471
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTT 369
+ KL ++H ++K DD ++ N L+ Y G E E++FSRM E +D VSW +
Sbjct: 472 LSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNS 531
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y + L KA++ +M G D T A+VLSACA + L+ G+++H A+R
Sbjct: 532 MISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRAC 591
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L S ++I + L+DMYSKC ID A F+ +P +N+ SW S+I G + AL F
Sbjct: 592 LESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFT 651
Query: 490 KMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDM 543
+M L+ + P+ +T V +LSAC+ IG + G E + G +P + ++D+
Sbjct: 652 RMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEV----YGLVPRVEHYSCMVDL 707
Query: 544 YVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
R G + N N + ++ W +L G RG G E
Sbjct: 708 LGRAGELDKIDNFINKMPIKPNILIWRTVL-GACCRGNGRKTE 749
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 244/468 (52%), Gaps = 11/468 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A F + G +A +F +M R+ S N L+ G + +EA+ +++ +
Sbjct: 188 VGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETRHLV 247
Query: 192 GVKPDVYTFPCVLRTCGGVPDL----KRGKEVHVHVIRFGY-EADVDVVNALITMYVKCG 246
+ D Y +L C L ++G+EVH + IR G +A V V N LI MY KCG
Sbjct: 248 DINVDSYVI--LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCG 305
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ AR VF M +D +SWN+MI+G +N + + + MR+ + P TL S +S
Sbjct: 306 DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALS 365
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ +G LG++ HG IK+G DVSV N L+ +Y G+ E +KVFS M +D VS
Sbjct: 366 SCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVS 425
Query: 367 WTTMISCYEGS-VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W T+I S +A+E + M G P+ +T ++L+ + L L ++H L
Sbjct: 426 WNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALI 485
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEA 484
++ + I N L+ Y K ++ E+F ++ + ++ +SW S+I G N+ +A
Sbjct: 486 LKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKA 545
Query: 485 L-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ + + M + + T ++LSACA + L G E+HA A+R + D + +AL+DM
Sbjct: 546 MDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDM 605
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y +CGR+ A FN R++ +WN +++GYA G G A F +M
Sbjct: 606 YSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRM 653
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 234/462 (50%), Gaps = 27/462 (5%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC--GGVPDL 213
M DR+ +W LI GY + G D+A + + M + G + P+ + F +R C + L
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFL-PNRFAFGSAIRACQESMLCGL 59
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVK-CGDLVRARLVFDGMPKRDRISWNAMISG 272
+ G ++H +++ Y D + N LI+MY K G + AR VFD + R+ I WN+++S
Sbjct: 60 QLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSV 119
Query: 273 YFENGEYMKGLMLFIMMR----EVLVDPDFMTLSSVISASELVGDEKLG--REVHGYVIK 326
Y + G+ LF M+ + + P+ T S+I+A+ D L ++ + K
Sbjct: 120 YSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKK 179
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G ++ V + L + G+ + K+F +M +++ VS ++ ++AVE
Sbjct: 180 SGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239
Query: 387 YQMMEAEGSMPDEITIAS---VLSACACLGNLDLGIK----LHQLAMRTGL-ISYIIIAN 438
++ E +I + S +LSACA LD G + +H A+RTGL + + + N
Sbjct: 240 FK----ETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGN 295
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
LI+MY+KC ID A VF + DK+ +SW S+I GL N +A+ + M L P
Sbjct: 296 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 355
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
++ TL+S LS+CA +G ++ G++ H +++G+ D + N LL +Y G + F
Sbjct: 356 SNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVF 415
Query: 558 N-SNERDVSAWNILLTGYAERGQG-ALAEEFFRKMIDSKGNW 597
+ ERD +WN ++ A+ G + A E F +M+ + W
Sbjct: 416 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM--RAGW 455
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 209/444 (47%), Gaps = 6/444 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L N E A+K +SM++ + L++ + C G H K
Sbjct: 326 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIK 385
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF-FDEALS 182
+ V + N L+++ + G L VF M +RD SWN +IG A +G EA+
Sbjct: 386 LGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIE 445
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G P+ TF +L T + K ++H ++++ + D + NAL+ Y
Sbjct: 446 VFLEMMRAGW-SPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACY 504
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
K G++ +F M +RD +SWN+MISGY N K + L +M + D T
Sbjct: 505 GKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTF 564
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++V+SA V + G EVH I+ DV + + L+ MY G + + F+ M
Sbjct: 565 ATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPM 624
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK- 420
+++ SW +MIS Y D A+ + M+ G +PD IT VLSAC+ +G +D G +
Sbjct: 625 RNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEY 684
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG-LRLN 478
+ GL+ + + ++D+ + +DK +++P K N++ W +++ R N
Sbjct: 685 FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVLGACCRGN 744
Query: 479 NRSFEALIFFRKMMLNLKPNSVTL 502
R E +M+ N+ P + +
Sbjct: 745 GRKTELGRRAAEMLFNMDPQNAVM 768
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 242/488 (49%), Gaps = 42/488 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G V P+ YTFP
Sbjct: 50 FDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLV-PNSYTFPF 108
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG----- 257
+L+ C + G+++H HV++ G + D+ V +LI MYVK G AR VFD
Sbjct: 109 LLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD 168
Query: 258 --------------------------MPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+P +D +SWNA+ISGY E G Y + L LF M +
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK 228
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA +LGR+VH ++ GF ++ + N LI +Y+ G E
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW T+I Y L +A+ +Q M G P+E+T+ S+L ACA
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAH 348
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF + ++++ SW
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ R+ A F +M + ++P+ +T V +LSAC+ G L G+ I
Sbjct: 409 AMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTED 468
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALA 583
+I + + ++D+ G K A NS E D W LL G L
Sbjct: 469 YKITPKLEHY--GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELG 526
Query: 584 EEFFRKMI 591
E F + +I
Sbjct: 527 ESFAQNLI 534
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 48/452 (10%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + + EG +H V K L + + + ++M+VK G A VF + RD
Sbjct: 109 LLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD 168
Query: 161 LFSWNVLIGGYAKAGF-------------------------------FDEALSLYQRMFW 189
+ S+ LI GYA G+ + EAL L++ M
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK 228
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
VKPD T VL C ++ G++VH + G+ +++ +VNALI +Y+KCG++
Sbjct: 229 T-NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 287
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+G+ +D ISWN +I GY Y + L+LF M P+ +T+ S++ A
Sbjct: 288 TASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACA 347
Query: 310 LVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G +GR +H Y+ K G S+ S+ LI MY G+ E ++VF M ++ + SW
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI + + A + + M +G PD+IT +LSAC+ G LDLG + R
Sbjct: 408 NAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI----FR 463
Query: 428 TGLISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+ Y I +ID+ +A E+ + + D + + W S++ +++ +
Sbjct: 464 SMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG-N 522
Query: 482 FEALIFFRKMMLNLKPN---SVTLVSILSACA 510
E F + ++ ++P S L+S + A A
Sbjct: 523 VELGESFAQNLIKIEPKNSGSYVLLSNIYATA 554
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 174/380 (45%), Gaps = 39/380 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V ++ C + G +HS +
Sbjct: 204 NALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDD 263
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + +++K G++ A +F + +D+ SWN LIGGY + EAL L
Sbjct: 264 HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 323
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G P+ T +L C + + G+ +HV++ + G + +LI M
Sbjct: 324 FQEML-RSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDM 382
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A+ VFD M R SWNAMI G+ +G +F MR+ ++PD +T
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITF 442
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + E K+ ++E
Sbjct: 443 VGLLSACSHSGMLDLGRHI-------------------------FRSMTEDYKITPKLE- 476
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ MI S L +A E ME + PD + S+L AC GN++LG
Sbjct: 477 ----HYGCMIDLLGHSGLFKEAEEMINSMEMD---PDGVIWCSLLKACKMHGNVELGESF 529
Query: 422 HQLAMR---TGLISYIIIAN 438
Q ++ SY++++N
Sbjct: 530 AQNLIKIEPKNSGSYVLLSN 549
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 36/312 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + LI+ + F VF ++ +++ W TM +
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S P A+ Y M + G +P+ T +L ACA G ++H ++ G +
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQ-------------------------------IPDK 463
+ +LI MY K + A +VF Q IP K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW ++I G EAL F++MM N+KP+ T+V++LSACA+ ++ G+++H
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G + + NAL+D+Y++CG ++ A F + +DV +WN L+ GY
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318
Query: 582 LAEEFFRKMIDS 593
A F++M+ S
Sbjct: 319 EALLLFQEMLRS 330
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 252/496 (50%), Gaps = 15/496 (3%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV + C +EGL +H + ++ + N+ LSM+ D+ A +F +MC
Sbjct: 139 LVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMC 197
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+RD+ SW+V+IGGY + G AL L+ M ++ D T VL+ C D+ G+
Sbjct: 198 ERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGR 257
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH VI G + D+ V N++I MY KC D A F+ MP R+ +SWN++ISG
Sbjct: 258 SVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTE 317
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
++ + L LF M + D +TL +++ + + D + +H VI+ G+ + V N
Sbjct: 318 KHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVIN 377
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI Y E K+F R+++KD VSW+ MI+ + PD+A+ +Q M P
Sbjct: 378 SLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP 437
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +TI S+L A + +L H +A+R GL + + + ++DMY+KC I + + F
Sbjct: 438 NGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAF 497
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
QIP+KN++SW ++I +N + +AL +M L+ LKPN VT +S+LSAC+ G +
Sbjct: 498 DQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVE 557
Query: 517 CG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSA-W 567
G + H + G+ + ++DM R G++ A N + RD + W
Sbjct: 558 EGLSFFENMVQDHGVEPGLEHY----SCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLW 613
Query: 568 NILLTGYAERGQGALA 583
LL+ G L
Sbjct: 614 GALLSACRSSGNSRLG 629
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 235/449 (52%), Gaps = 5/449 (1%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ L ++K G L A +VF M RD SWN++I G+ G D+ L + R V
Sbjct: 73 GNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF-RQARVIA 131
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P+V T + C + ++ G ++H ++IR G+ V N+L++MY D+ RA
Sbjct: 132 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 190
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELV 311
+FD M +RD ISW+ MI GY + GE L LF+ M ++ D +T+ SV+ A
Sbjct: 191 ELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANT 250
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD +GR VHG VI G D+ V N +I MY + E K F+ M ++ VSW ++I
Sbjct: 251 GDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSII 310
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + +A+ + M G DE+T+ ++L +C + +H + +R G
Sbjct: 311 SGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE 370
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N+LID YSKC I+ A ++F ++ K+ +SW+++I G + EA+ F++M
Sbjct: 371 LNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM 430
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
KPN VT++S+L A + L K H A+R G+A + + A+LDMY +CG +
Sbjct: 431 NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 490
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ F+ E+++ +W ++ G
Sbjct: 491 GLSRKAFDQIPEKNIVSWGAMIAACGMNG 519
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 221/435 (50%), Gaps = 21/435 (4%)
Query: 161 LFSWNVLIGGYAKAGFFD--EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
L +WN+ I ++D EA S Y +M G D +L+ C +P
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP------- 64
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
G+++ N+++ Y+K G L A VFD M RD +SWN MI G+ G
Sbjct: 65 --------GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 116
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
KGL F R + +P+ TL I A +G + G ++HGY+I+ GF D SV N
Sbjct: 117 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNS 176
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ MY + E E++F M +DV+SW+ MI Y + A++ + M + S+
Sbjct: 177 LLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIEL 235
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D IT+ SVL ACA G++ +G +H + + GL + + N++IDMYSKC + A + F
Sbjct: 236 DGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAF 295
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
+++P +N +SW SII GL + EAL F M + + VTLV++L +C
Sbjct: 296 NEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPF 355
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
K IH+ +R G + F+ N+L+D Y +C ++ AW F+ +D +W+ ++ G+
Sbjct: 356 QCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFN 415
Query: 576 ERGQGALAEEFFRKM 590
G+ A F++M
Sbjct: 416 HCGKPDEAIALFQEM 430
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 12/267 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L +AL SM + DE LVNL++ C++ + ++HS+V +
Sbjct: 307 NSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIR 366
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L+ + N+ + + K + AW +F ++ +D SW+ +I G+ G DEA++L
Sbjct: 367 WGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIAL 426
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q M KP+ T +L DLKR K H IR G A+V V A++ MY
Sbjct: 427 FQEMNQ-AQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYA 485
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ +R FD +P+++ +SW AMI+ NG L L M+ + P+ +T S
Sbjct: 486 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLS 545
Query: 304 VISASELVGDEKLGREVHGYVIKMGFS 330
V+SA HG +++ G S
Sbjct: 546 VLSACS-----------HGGLVEEGLS 561
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 234/449 (52%), Gaps = 13/449 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN+ L+M+ K G + A F M R++ SW+ ++ YA+ G D+AL L+Q+M
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKM-EEE 70
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P+ TF VL C +++G+ +H R + + V AL+ MY KC L+ A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFDG+ ++D ++W+ MIS Y + G + + LF M V P+ + L S++ A
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSA 190
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G G+ H V+ GF DVS N LIKMY G+ + VF ME +D++SW+ M+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ A ++ M+ EG PD +T S+L AC+ LG L G +H G
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQ 310
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + I N+LIDMY KC + A +F ++ +NVI+WT++I + + EAL F +M
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
++P+ V +SI+ +C+ G + +E + L++ V F P +LD+
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLV---EEGRIYFLKM-VEDQSFTPGVEHFVGMLDLLG 426
Query: 546 RCGRMKPAWN--QFNSNERDVSAWNILLT 572
R G++ A +F E V WN LL+
Sbjct: 427 RSGKLNEAEELMEFMPVEPGVVGWNTLLS 455
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 192/359 (53%), Gaps = 2/359 (0%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KCG + AR F+ M R+ ISW+ M++ Y + G++ + L+LF M E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+P+ +T SV+ A + G +H + + V L+ MY E
Sbjct: 72 VEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEAR 131
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF + KDVV+W+TMIS Y +A++ + M +G P+EI + S+L AC+ G
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G H+L + G + + NTLI MY KC + A VF + +++ISW++++
Sbjct: 192 ALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLA 251
Query: 474 GLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ + +A + FR+M L +KP+ VT VS+L AC+ +GAL+ G IH G
Sbjct: 252 VIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQS 311
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ N+L+DMY +CG ++ A F+ + R+V W ++T + QG A E F +M
Sbjct: 312 VMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 210/416 (50%), Gaps = 9/416 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +QAL M+E + +E ++++ C ++G +H + ++ + + +G
Sbjct: 55 GDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVG 114
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K L A VF + ++D+ +W+ +I YA+ G EA+ L+ M + GV
Sbjct: 115 TALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMN-LDGV 173
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ +L C L GK H V+ G+ ADV N LI MY KCGDL A+
Sbjct: 174 RPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKA 233
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF GM +RD ISW+AM++ E+G + F M V PD++T S++ A L+G
Sbjct: 234 VFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGA 293
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G +H + GF + + N LI MY G+ + +F RM ++V++WTTMI+
Sbjct: 294 LVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITA 353
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG----IKLHQLAMRTG 429
+A+E ++ ME G PD++ S++ +C+ G ++ G +K+ + T
Sbjct: 354 CVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTP 413
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
+ + + ++D+ + +++A E+ +P + V+ W +++ + +N + A
Sbjct: 414 GVEHFV---GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERA 466
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
TGL + N+L++MY KC +++A E F + +NVISW++++ +AL+
Sbjct: 4 TGLCCGEFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVL 63
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM ++PN VT +S+L ACA A+ G+ IH A R + + AL+ MY +
Sbjct: 64 FQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGK 123
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
C R+ A F+ E+DV W+ +++ YA+ G A + F M
Sbjct: 124 CSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYM 168
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + A + M + D V+L+ C EG +H+ + + +
Sbjct: 256 HGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYI 315
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + M+ K G L A +F +M R++ +W +I + EAL L++ M G
Sbjct: 316 ENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM-EKAG 374
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
V+PD F ++ +C ++ G+ + ++ + V+ ++ + + G L A
Sbjct: 375 VQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEA 434
Query: 252 RLVFDGMP-KRDRISWNAMIS 271
+ + MP + + WN ++S
Sbjct: 435 EELMEFMPVEPGVVGWNTLLS 455
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 246/477 (51%), Gaps = 8/477 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW--VGGVKPD 196
++ ++ L HA +F + + ++ WN L+ Y G + E LSL+ +M + +PD
Sbjct: 45 LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPD 104
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YT L++C G+ L+ GK +H + + + D+ V +ALI +Y KCG + A VF
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFT 164
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEK 315
PK+D + W ++I+GY +NG L F M + V PD +TL S SA + D
Sbjct: 165 EYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFN 224
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LGR VHG+V + GF + + N ++ +Y G+ +F M KD++SW++M++CY
Sbjct: 225 LGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYA 284
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ A+ + M + + +T+ S L ACA NL+ G +H+LA+ G I
Sbjct: 285 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDIT 344
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
++ L+DMY KC A+++F+++P K+V+SW + G + ++L F M+
Sbjct: 345 VSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYG 404
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+P+++ LV IL+A + +G + +HA + G + F+ +L+++Y +C + A
Sbjct: 405 TRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNAN 464
Query: 555 NQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM---IDSKGNWRKLMGLFRKC 607
F R DV W+ ++ Y GQG A + F +M D K N + + C
Sbjct: 465 KVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSAC 521
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 235/464 (50%), Gaps = 11/464 (2%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C + + G +H + K + +G+A + ++ K G + A VF + +D+
Sbjct: 112 LKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDV 171
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
W +I GY + G + AL+ + RM + V PD T C + D G+ VH
Sbjct: 172 VLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHG 231
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V R G++ + + N+++ +Y K G + A +F MP +D ISW++M++ Y +NG
Sbjct: 232 FVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETN 291
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L LF M + ++ + +T+ S + A + + G+ +H + GF D++V L+
Sbjct: 292 ALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMD 351
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ + + +F+RM KDVVSW + S Y + K++ + M + G+ PD I
Sbjct: 352 MYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIA 411
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ +L+A + LG + + LH ++G + I +LI++Y+KC ID A +VF +
Sbjct: 412 LVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMR 471
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGK 519
K+V++W+SII + + EAL F +M ++KPN VT VSILSAC+ G + G
Sbjct: 472 RKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGI 531
Query: 520 EIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFN 558
++ + V +PN ++D+ R G + A + N
Sbjct: 532 KM----FHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMIN 571
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 198/367 (53%), Gaps = 6/367 (1%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G D VV L +Y + L A +F+ P + WNA++ YF G
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 278 EYMKGLMLFIMMREVLVD---PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
++++ L LF M + PD T+S + + + +LG+ +HG++ K +D+
Sbjct: 82 KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAE 393
V + LI++Y G + KVF+ +DVV WT++I+ YE + P+ A+ + +M+ E
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
PD +T+ S SACA L + +LG +H R G + + +AN+++++Y K I A
Sbjct: 202 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSA 261
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
+F ++P K++ISW+S++ N AL F +M+ ++ N VT++S L ACA
Sbjct: 262 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 321
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L GK IH A+ G D + AL+DMY++C K A + FN ++DV +W +L
Sbjct: 322 SNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLF 381
Query: 572 TGYAERG 578
+GYAE G
Sbjct: 382 SGYAEIG 388
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 12/285 (4%)
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +K+G + D V L +Y + + K+F K V W ++ Y
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSY---F 78
Query: 379 LPDKAVET---YQMMEAEG---SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
L K VET + M A+ PD T++ L +C+ L L+LG +H + + +
Sbjct: 79 LEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDN 138
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + + LI++YSKC ++ A++VF + P ++V+ WTSII G N AL FF +M+
Sbjct: 139 DMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMV 198
Query: 493 L--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + P+ VTLVS SACA++ G+ +H R G L N++L++Y + G +
Sbjct: 199 VLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258
Query: 551 KPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ A N F +D+ +W+ ++ YA+ G A F +MID +
Sbjct: 259 RSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKR 303
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 2/241 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ AL + M + I ++ +++ +R C +EG ++H + L + +
Sbjct: 286 NGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITV 345
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++K +A +F +M +D+ SW VL GYA+ G ++L ++ M G
Sbjct: 346 STALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSY-G 404
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD +L + +++ +H V + G++ + + +LI +Y KC + A
Sbjct: 405 TRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNAN 464
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASELV 311
VF GM ++D ++W+++I+ Y +G+ + L LF M V P+ +T S++SA
Sbjct: 465 KVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHA 524
Query: 312 G 312
G
Sbjct: 525 G 525
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 225/435 (51%), Gaps = 6/435 (1%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
ELN V L LV + EW + G +H V K + +G A + + G +
Sbjct: 42 HELNPFVFTTVLKLLVSM-EWA---ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCV 97
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF ++ +D+ SW +I YA+ F EAL + +M V G KP+ +TF VL+
Sbjct: 98 SMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQM-RVAGFKPNNFTFAGVLKA 156
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C G+ + GK VH V++ YE D+ V L+ +Y +CGD A F MPK D I W
Sbjct: 157 CLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPW 216
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
+ MIS + ++G+ K L +F MR V P+ T SSV+ AS + L + +HG+ +K
Sbjct: 217 SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK 276
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
G S DV V N L+ Y G E+ ++F + ++ VSW T+I Y ++A+
Sbjct: 277 AGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSL 336
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M E+T +S+L ACA L L+LG+++H L +T + + N LIDMY+K
Sbjct: 337 FSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAK 396
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C I A +F + ++ +SW +II G ++ EA+ F M KP+ +T V +
Sbjct: 397 CGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGV 456
Query: 506 LSACARIGALMCGKE 520
LSAC+ G L GK+
Sbjct: 457 LSACSNTGRLDEGKQ 471
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 237/445 (53%), Gaps = 3/445 (0%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF +M +R+ S+ LI GYA++ F EA L+ R+ G + + + F VL+ +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGH-ELNPFVFTTVLKLLVSME 60
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ VH V++ GY ++ + ALI Y G + AR VFD + +D +SW MI+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y EN + + L F MR P+ T + V+ A + + G+ VH V+K +
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ V L+++Y G+ ++ + F M DV+ W+ MIS + S +KA+E + M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+P++ T +SVL A A + +LDL +H A++ GL + + ++N L+ Y+KC CI+
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
+++E+F + D+N +SW +II+ AL F M+ ++ VT SIL ACA
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ AL G ++H + D + NAL+DMY +CG +K A F+ + RD +WN
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420
Query: 570 LLTGYAERGQGALAEEFFRKMIDSK 594
++ GY+ G G A + F M ++K
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETK 445
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 11/413 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +AL++ M+ + +++ C + +D G +H V KT + +
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYV 184
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY---QRMFW 189
G L ++ + GD AW FG M D+ W+ +I +A++G ++AL ++ +R F
Sbjct: 185 GVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAF- 243
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V P+ +TF VL+ + L K +H H ++ G DV V NAL+ Y KCG +
Sbjct: 244 ---VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
++ +F+ + R+ +SWN +I Y + G+ + L LF M V +T SS++ A
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ +LG +VH K + DV+V N LI MY G+ ++ +F ++ +D VSW
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT- 428
+I Y L +A++ + +M+ PDE+T VLSAC+ G LD G K + +M+
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEG-KQYFTSMKQD 479
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
G+ + ++ + + +D+A++ IP + +V+ W +++ ++N
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHN 532
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VFD MP+R+ +S+ +I GY ++ ++++ LF + + + ++V+ +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+LGR VHG V+K+G+ + + LI Y G +VF + SKD+VSWT MI+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A+E + M G P+ T A VL AC L N D G +H ++T
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+++Y++C D A F +P +VI W+ +I + +S +AL F +M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ PN T S+L A A I +L K IH HAL+ G++ D F+ NAL+ Y +CG ++
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ F + ++R+ +WN ++ Y + G G A F M+
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNML 341
>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
Length = 623
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 243/471 (51%), Gaps = 34/471 (7%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++M+ K G + A VF M +L SWN +I +A G AL++++ M V
Sbjct: 44 NHLINMYGKCGRVEEARAVFASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASV 103
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD +F V CG + + +H V G+ DV + +LITMY KCG + ARL
Sbjct: 104 VPDRVSFTSVANACGSA---REARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARL 160
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M +R+ +SWNAM+SGY ++G + L LF M + V P+ +TL V++A +
Sbjct: 161 VFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQ 220
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMIS 372
+ E G ++V+V N I M+ G+ + +F+ M ++DV+SW M++
Sbjct: 221 LRQADEC-------GVEEEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMA 273
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH---------- 422
Y + D+AV + ME G PD +T + L+AC ++ G +H
Sbjct: 274 GYANAGRGDEAVVLLRQMEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDT 333
Query: 423 -QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
L++RT ++ +L MY++C ID+A VF + +NV+SW ++I + R+
Sbjct: 334 PALSLRTN----AVVGCSLCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRA 389
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
AL F M + +KP+++TL+S+L ACA G G ++H +L++ + L NA
Sbjct: 390 RLALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQL-RSAALDNAA 448
Query: 541 LDMYVRCGRMKPAWNQF---NSNERDVSAWNILLTGYAERGQGALAEEFFR 588
++MY + GR+ A F ++ R + +W+ ++ YA G AEE FR
Sbjct: 449 VNMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGH---AEEAFR 496
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 220/456 (48%), Gaps = 32/456 (7%)
Query: 79 ALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL +MQ E ++ D + ++ C R E +H+ V+ V +G + +
Sbjct: 90 ALAVFRAMQLEASVVPDRVSFTSVANACGSAR---EARIIHASVAARGFLDDVIIGTSLI 146
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G + A VF M +R+ SWN ++ GY++ G + L L++ M GGV+P+
Sbjct: 147 TMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQ-GGVQPNA 205
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T V+ C + L++ E G E +V V NA I M+ K GD+ RA +F
Sbjct: 206 VTLLPVVNACSSLAQLRQADEC-------GVEEEVAVRNACINMHAKRGDVDRAAAIFAS 258
Query: 258 M-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M RD ISWN M++GY G + ++L M + PD +T + ++A + +
Sbjct: 259 MVAARDVISWNVMMAGYANAGRGDEAVVLLRQMEQHGFHPDRVTYVNFLNACDKAEMVEH 318
Query: 317 GREVHGYVI-------KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GR +HG ++ + + V L MY G+ +E VF+ ME ++VVSW
Sbjct: 319 GRSIHGRIVLQSRDTPALSLRTNAVVGCSLCSMYARCGSIDEAAAVFAGMEQRNVVSWNA 378
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH----QLA 425
MI Y A+ + M+ G PD IT+ SVL ACA G+ G ++H QL
Sbjct: 379 MIGAYAQHGRARLALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQ 438
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFE 483
+R+ + N ++MY+K + A EVF + + ++SW++++ + E
Sbjct: 439 LRSAALD-----NAAVNMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGHAEE 493
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
A F M ++PN VTL+SIL AC+ G L G
Sbjct: 494 AFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAG 529
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 198/409 (48%), Gaps = 24/409 (5%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD---VVNALITMYVKCGDLVRAR 252
+ T+ +L+ C + L +G+ +H H++ + V+N LI MY KCG + AR
Sbjct: 1 EASTYARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEAR 60
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELV 311
VF M + +SWN +I+ + G+ L +F M+ E V PD ++ +SV +A
Sbjct: 61 AVFASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANA---C 117
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G + R +H V GF DDV + LI MY G+ E+ VF M ++ VSW M+
Sbjct: 118 GSAREARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAML 177
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + + ++ M G P+ +T+ V++AC+ L L + A G+
Sbjct: 178 SGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQL-------RQADECGVE 230
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQ-IPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + N I+M++K +D+A +F + ++VISW ++ G R EA++ R+
Sbjct: 231 EEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQ 290
Query: 491 M-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL-------RIGVAFDGFLPNALLD 542
M P+ VT V+ L+AC + + G+ IH + + + + + +L
Sbjct: 291 MEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCSLCS 350
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY RCG + A F E R+V +WN ++ YA+ G+ LA F M
Sbjct: 351 MYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGM 399
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 401 TIASVLSACACLGNLDLGIKLHQ---LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
T A +L ACA L L G ++H + + S ++ N LI+MY KC +++A VF
Sbjct: 4 TYARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVF 63
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGAL 515
+ N++SW +II AL FR M L ++ P+ V+ S+ +AC G+
Sbjct: 64 ASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANAC---GSA 120
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
+ IHA G D + +L+ MY +CG ++ A F+S ER+ +WN +L+GY
Sbjct: 121 REARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGY 180
Query: 575 AERGQGALAEEFFRKMID 592
++ G GA FR M+
Sbjct: 181 SQHGHGAQLLHLFRAMLQ 198
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 245/484 (50%), Gaps = 19/484 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N L F D + ++F ++ ++F WN +I G FD+A+ Y M G
Sbjct: 50 NMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR-SEGF 108
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +TFP VL+ C + DL+ G ++H V++ G++ DV V +L+ +Y KCG L A
Sbjct: 109 LPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHK 168
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD +P ++ +SW A+ISGY G++ + + +F + E+ + PD T+ V+SA +GD
Sbjct: 169 VFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGD 228
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G +H +++MG +V V L+ MY GN E+ VF M KD+VSW MI
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQG 288
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + LP +A++ + M+ E PD T+ VLSACA LG L+LG + L R +
Sbjct: 289 YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN 348
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
++ LID+Y+KC + +A EVF + +K+ + W +II GL +N + F ++
Sbjct: 349 PVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEK 408
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRC 547
L +KP+ T + +L C G + G+ R F P+ ++D+ R
Sbjct: 409 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR----FFSLTPSIEHYGCMVDLLGRA 464
Query: 548 GRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID----SKGNWRKL 600
G + A +Q N E + W LL LAE +++I+ + GN+ L
Sbjct: 465 GLLDEA-HQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523
Query: 601 MGLF 604
++
Sbjct: 524 SNIY 527
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 204/391 (52%), Gaps = 12/391 (3%)
Query: 225 RFGYEADVDVVNALITMYVKCG----DLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
RFG D N L+ M ++C D R +F + + + WN MI G N +
Sbjct: 39 RFGLCHD----NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFD 94
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + +MR P+ T V+ A + D +LG ++H V+K GF DV V L+
Sbjct: 95 DAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLV 154
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+Y G E+ KVF + K+VVSWT +IS Y G +A++ ++ + PD
Sbjct: 155 CLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSF 214
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI VLSAC LG+L+ G +H+ M G++ + + +L+DMY+KC ++KA VF +
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGK 519
P+K+++SW ++I G LN EA+ F +M N+KP+ T+V +LSACAR+GAL G+
Sbjct: 275 PEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ R ++ L AL+D+Y +CG M AW F E+D WN +++G A G
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNG 394
Query: 579 QGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
++ F ++ + K + +GL C
Sbjct: 395 YVKISFGLFGQVEKLGIKPDGNTFIGLLCGC 425
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 216/451 (47%), Gaps = 8/451 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L N + A+++ M+ + +++ C G+ +H++V K
Sbjct: 81 NTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVK 140
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + + + ++ K G L A VF + D+++ SW +I GY G F EA+ +
Sbjct: 141 GGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDM 200
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++R+ + + PD +T VL C + DL G+ +H ++ G +V V +L+ MY
Sbjct: 201 FRRLLEM-NLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYA 259
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ +AR VFDGMP++D +SW AMI GY NG + + LF+ M+ V PD T+
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA +G +LG V G V + F + + LI +Y G+ +VF M+ KD
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKD 379
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W +IS + + + +E G PD T +L C G +D G +
Sbjct: 380 RVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439
Query: 424 LAMR-TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
R L I ++D+ + +D+A ++ +P + N I W +++ R+ +R
Sbjct: 440 SMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRI-HRD 498
Query: 482 FEALIFFRKMMLNLKP----NSVTLVSILSA 508
+ K ++ L+P N V L +I SA
Sbjct: 499 TQLAELALKQLIELEPWNSGNYVLLSNIYSA 529
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 275/543 (50%), Gaps = 13/543 (2%)
Query: 62 NPN---SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
NPN RL + NG L +A+ L+ M D ++ C R +D G +H
Sbjct: 30 NPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFF 177
++++ L N+ +S++ K G A +F M RDL SW+ ++ +A
Sbjct: 90 EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMG 149
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVN 236
AL + M G P+ Y F R C + G + V++ GY ++DV V
Sbjct: 150 FRALLTFVDMI-ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGC 208
Query: 237 ALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
LI M+VK GDLV A VF+ MP+R+ ++W MI+ + G + + LF+ M +
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYE 268
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF---GNREEG 352
PD TLS VISA + LG+++H I+ G + D V LI MY G+
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328
Query: 353 EKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
K+F ++ +V SWT MI+ Y + ++A++ ++ M +P+ T +S L ACA
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L +G ++ A++ G S +AN+LI MY++ ID A + F + +KN+IS+ ++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I N S EAL F ++ + ++ T S+LS A IG + G++IHA ++ G+
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRK 589
+ + NAL+ MY RCG ++ A+ F E R+V +W ++TG+A+ G A E F K
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 590 MID 592
M++
Sbjct: 569 MLE 571
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 242/474 (51%), Gaps = 10/474 (2%)
Query: 130 VRLGNAFLSMFVK-FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V +G + MFVK GDL A+ VF KM +R+ +W ++I + G+ EA+ L+ M
Sbjct: 204 VCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI 263
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC--- 245
+ G +PD +T V+ C + L G+++H IR G D V LI MY KC
Sbjct: 264 -LSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD 322
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSV 304
G + AR +FD + + SW AMI+GY + G Y + L LF M V P+ T SS
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A + ++G +V + +K+GFS V N LI MY G ++ K F + K++
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+S+ T+I Y ++ ++A+E + +E +G T AS+LS A +G + G ++H
Sbjct: 443 ISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHAR 502
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+++GL + N LI MYS+C I+ A +VF + D+NVISWTSII G + + +A
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQA 562
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLD 542
L F KM+ ++PN VT +++LSAC+ +G + G K + GV ++D
Sbjct: 563 LELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVD 622
Query: 543 MYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ R G + A NS + D W L G L + + +I+ +
Sbjct: 623 ILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 212/401 (52%), Gaps = 10/401 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKF---GDLGHAWYVFGKMCDRDLFSWNVLIGG 170
G LHS + L +G ++M+ K G + A +F ++ D ++FSW +I G
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 171 YAKAGFFDE-ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y + G +DE AL L++ M + V P+ +TF L+ C + L+ G++V H ++ G+
Sbjct: 350 YVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V N+LI+MY + G + AR FD + +++ IS+N +I Y +N + L LF +
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + T +S++S + +G G ++H VIK G + SVCN LI MY GN
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +VF ME ++V+SWT++I+ + +A+E + M EG P+ +T +VLSAC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSAC 588
Query: 410 ACLGNLDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVI 466
+ +G ++ G K H +M T G+I + ++D+ + + +A++ + +P K + +
Sbjct: 589 SHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADAL 647
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W + + R++ + E KM++ +P+ +LS
Sbjct: 648 VWRTFLGACRVHG-NLELGKHAAKMIIEQEPHDPAAYILLS 687
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N + E+AL+ + +++ + +L+ +G +H+ V K
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIK 505
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L+ + NA +SM+ + G++ A+ VF M DR++ SW +I G+AK GF +AL L
Sbjct: 506 SGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMY 242
+ +M GV+P++ T+ VL C V + G K G ++ ++ +
Sbjct: 566 FHKML-EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDIL 624
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAM-----ISGYFENGEYMKGLMLFIMMREVLVDP 296
+ G L A + MP K D + W + G E G++ +++ + DP
Sbjct: 625 GRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMII----EQEPHDP 680
Query: 297 DFMTLSSVISASELVGDE-----KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
L S + AS DE K +E + +IK V V N + K Y+ + +
Sbjct: 681 AAYILLSNLYASTSKWDEVSNIRKAMKEKN--LIKEAGCSWVEVENKVHKFYVGDTSHPK 738
Query: 352 GEKVFSRMESKDV 364
+++ +++ V
Sbjct: 739 AAEIYDELQNLSV 751
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T L C R + G +H + + D N+L+ +Y +CG+ + A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 557 FN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F + RD+ +W+ +++ +A G A F MI++
Sbjct: 124 FQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 277/572 (48%), Gaps = 42/572 (7%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQE---------LNICVDEDALVN---------- 100
T NS LN G L+ A+ DSM+ ++ C+D ALV
Sbjct: 99 TSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARV 158
Query: 101 ------------LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
LV+ C R EGL LH + ++ S + N+FL M+ D+
Sbjct: 159 AGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DMDC 217
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F +M ++D+ SW+ +IGGY + L ++Q+M + PD VL+ C
Sbjct: 218 ARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACA 277
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
++ G+ VH I G ++D+ V N+LI MY KC D A VF MP+R+ +SWN+
Sbjct: 278 NSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNS 337
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
++SG N +Y + L+L MR ++ D +TL + + + + VH I+ G
Sbjct: 338 LLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRG 397
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ V N LI Y E +VFSR +DVV W+TMI+ + PD+A+ +Q
Sbjct: 398 CESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQ 457
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M +P+ +TI ++L AC+ L + H A+R GL + + + ++DMYSKC
Sbjct: 458 KMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCG 517
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
I+ + + F+QIP KN+I+W+++I +N + EAL +M + +KPN++T +S+L+
Sbjct: 518 EIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLT 577
Query: 508 ACARIGALMCGKEIHAHALR---IGVAFDGFLPNALLDMYVRCGRMKPAWNQF----NSN 560
AC+ G + G + ++ + F+ + + ++DM R G++ A +
Sbjct: 578 ACSHGGLVEMGLSVFKSMIQDHGVDPEFEHY--SCMVDMLSRAGKLDDAMELIRMMPETF 635
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
S W LL+ L E+ ++++
Sbjct: 636 RAGASVWGALLSACRTYRSSTLGEKAVYQVLE 667
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 247/474 (52%), Gaps = 11/474 (2%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y +G LH+ + KT +GN+ L+ ++K G+L A VF M RD SWNVLI G
Sbjct: 80 YIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHG 139
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G E L + V G +P++ T +++ C + + G ++H ++I+ G A
Sbjct: 140 CLDYGALVEGLWQFINAR-VAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWA 198
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MM 289
V N+ + MY D+ AR++FD MP++D ISW+AMI GY + E GL +F M+
Sbjct: 199 SWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKML 257
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ PD + L SV+ A + +GR VHG I G D+ V N LI MY +
Sbjct: 258 STSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDA 317
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVL 406
+VFS M ++ VSW +++S G +L K E + M EG DE+T+ + L
Sbjct: 318 GSAFEVFSEMPRRNNVSWNSLLS---GLILNKKYSEALLLVYSMRTEGIEADEVTLVNCL 374
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
C + +H +R G S I+ N+LID Y+KC I+ A EVF + ++V+
Sbjct: 375 QICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVV 434
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHA 525
W+++I G + EA+ F+KM ++ PN+VT++++L AC+ L H A
Sbjct: 435 LWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAA 494
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+R G+A + + A++DMY +CG ++ + FN ++++ W+ ++ Y G
Sbjct: 495 IRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNG 548
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 226/435 (51%), Gaps = 7/435 (1%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKE 218
L SW + I + + E +S Y + G DV FP VL+ C + + GK
Sbjct: 27 LLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYID-GKC 85
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H +I+ +++ + N+++ Y+KCG+L A VFD M RD +SWN +I G + G
Sbjct: 86 LHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGA 145
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
++GL FI R +P+ TL ++ A + ++ G ++HGY+I+ G SV N
Sbjct: 146 LVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNS 205
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ-MMEAEGSMP 397
+ MY + + +F M KDV+SW+ MI Y + ++ +Q M+ P
Sbjct: 206 FLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITP 264
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D + + SVL ACA N+ +G +H L + GL S + + N+LIDMYSKCK A EVF
Sbjct: 265 DGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVF 324
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
++P +N +SW S++ GL LN + EAL+ M ++ + VTLV+ L C
Sbjct: 325 SEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPY 384
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYA 575
K +H +R G + + N+L+D Y +C ++ AW F+ + RDV W+ ++ G+A
Sbjct: 385 HCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFA 444
Query: 576 ERGQGALAEEFFRKM 590
G+ A F+KM
Sbjct: 445 HCGKPDEAIAVFQKM 459
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 271/528 (51%), Gaps = 11/528 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+L L + + + + +V +++ C +GL LH + K+ +
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ LSM+V D+ A +F +M ++D+ +W+V+IGGY + L ++++M V G
Sbjct: 187 QNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPG 245
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD VL+ C D+ G+ VH VI G++ D+ V N+LI MY KC D A
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ + +R+ +SWN+M+SG+ N Y + L MR+ V+ D +TL +++ +
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +H +I+ G + V + LI Y E +VF+RM +DVVSW+TMIS
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ PD+A+ YQ M+ + P+ ITI ++L AC+ L H +A+R G S
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + ++DMYSKC I + F Q+ KN+++W+++I +N + EAL F +M
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMK 545
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMYVRCG 548
+ LKPN VT +S+L+AC+ G + G + L + F+ + + ++DM R G
Sbjct: 546 RHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLGRAG 603
Query: 549 RMKPAWNQFNSNERDV----SAWNILLTGYAERGQGALAEEFFRKMID 592
++ A + ++ S W LL+ G L +E ++++
Sbjct: 604 KLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLE 651
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 234/456 (51%), Gaps = 12/456 (2%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L +W + I + G + E +S Y + G DV FP +L+ + + GK +H
Sbjct: 12 LPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLH 70
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEY 279
+I+ G+++ + N+++ Y++CGD A VF+ M + RD +SWN +I G+ +NG
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ GL F R +P+ T+ VI A ++G + G +HGY+IK GF SV N L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPD 398
+ MY+ + E ++F M KDV++W+ MI Y P ++ + +M+ G PD
Sbjct: 191 LSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ + SVL ACA ++ G +H L + G + + N+LIDMYSKCK A +VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+I +N +SW S++ G LN EA M ++ + VTLV+IL C
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
K IH +R G + + +AL+D Y +C ++ AW F RDV +W+ +++G+A
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429
Query: 577 RGQG----ALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
G+ A+ +E R ++ K N ++ L C
Sbjct: 430 CGKPDEAIAVYQEMDRDLV--KPNVITIINLLEACS 463
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 274/548 (50%), Gaps = 28/548 (5%)
Query: 59 ATKNPN--SRLNELCLNGSLEQALKYLDSMQELNI-CVDEDALVNLVRLCEWK-RGYDEG 114
+K PN R+ E NG ++ + + +++ I VD +++ W + G
Sbjct: 9 GSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILK--AWSFLSHRHG 66
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAK 173
LH+ + K +GN+ + +++ GD A VF M RD SWN+LI G+
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 174 AGFFDEALSLYQRMFW-----VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G +L ++W V G +P++ T V++ C + G +H ++I+ G+
Sbjct: 127 NG------ALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGF 180
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
A V N+L++MYV D+ AR +FD M ++D I+W+ MI GY + E GL +F
Sbjct: 181 WAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRK 239
Query: 289 MREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M V ++PD + + SV+ A D GR VHG VI GF D+ V N LI MY
Sbjct: 240 MVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCK 299
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIAS 404
+ KVF+ + ++ VSW +M+S G VL + E + M E DE+T+ +
Sbjct: 300 DAGSAFKVFNEISQRNNVSWNSMLS---GFVLNENYSEAQSLISSMRKERVETDEVTLVN 356
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L C + +H + +R G + ++ + LID Y+KC I+ A EVF ++ ++
Sbjct: 357 ILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRD 416
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHA 523
V+SW+++I G + EA+ +++M +L KPN +T++++L AC+ L K H
Sbjct: 417 VVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHG 476
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
A+R G A + + A++DMY +CG + + F+ +++ W+ ++ Y G
Sbjct: 477 VAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHE 536
Query: 583 AEEFFRKM 590
A F +M
Sbjct: 537 ALALFAEM 544
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 143/267 (53%), Gaps = 12/267 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ LN + +A + SM++ + DE LVN++++C++ +H V+ +
Sbjct: 320 NSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIR 379
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
S + + +A + + K + AW VF +M RD+ SW+ +I G+A G DEA+++
Sbjct: 380 RGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAV 439
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
YQ M VKP+V T +L C +LKR K H IR G+ ++V V A++ MY
Sbjct: 440 YQEMD-RDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYS 498
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG+++ +R FD + ++ ++W+AMI+ Y NG + L LF M+ + P+ +T S
Sbjct: 499 KCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLS 558
Query: 304 VISASELVGDEKLGREVHGYVIKMGFS 330
V++A HG +++ G S
Sbjct: 559 VLAACS-----------HGGLVEEGLS 574
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 250/494 (50%), Gaps = 8/494 (1%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C + +G LH+ + T S S ++ N+ ++++ K A VF + ++D+ SW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 165 NVLIGGYAKAGFFDEALSLY----QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
N LI +++ +L + Q + + P+ +T V + D + G++ H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ DV ++L+ MY K G + AR +FD MP+R+ +SW MISGY
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 281 KGLMLFIMMR--EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ LF +MR E + + +SV+SA GR+VH +K G VSV N
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANA 259
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY+ G+ E+ K F +K+ ++W+ M++ + DKA++ + M G +P
Sbjct: 260 LVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPS 319
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E T+ V++AC+ + G ++H +++ G + + + L+DMY+KC I A + F
Sbjct: 320 EFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFE 379
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMC 517
I +V+ WTSII G N AL + KM L + PN +T+ S+L AC+ + AL
Sbjct: 380 CIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQ 439
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAE 576
GK++HA ++ + + + +AL MY +CG + + F RDV +WN +++G ++
Sbjct: 440 GKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQ 499
Query: 577 RGQGALAEEFFRKM 590
G+G E F KM
Sbjct: 500 NGRGNEGLELFEKM 513
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 240/471 (50%), Gaps = 17/471 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H++ KT V ++ L+M+ K G + A +F +M +R+ SW +I GYA
Sbjct: 135 GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYAS 194
Query: 174 AGFFDEALSLYQRM-FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
DEA L++ M G + + F VL + G++VH ++ G V
Sbjct: 195 QELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIV 254
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+TMYVKCG L A F+ ++ I+W+AM++G+ + G+ K L LF M +
Sbjct: 255 SVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P TL VI+A GR++HGY +K+G+ + V + L+ MY G+ +
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDA 374
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ DVV WT++I+ Y + + A+ Y M+ G +P+++T+ASVL AC+ L
Sbjct: 375 RKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNL 434
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
LD G ++H ++ I I + L MY+KC +D +F ++P ++VISW ++I
Sbjct: 435 AALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMI 494
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
GL N R E L F KM L KP++VT V++LSAC+ +G + G + +
Sbjct: 495 SGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG------WVYFKMM 548
Query: 532 FDGF--LPNA-----LLDMYVRCGRMKPAWNQFNSNERD--VSAWNILLTG 573
FD F P ++D+ R G++ A S D + W ILL
Sbjct: 549 FDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAA 599
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 219/458 (47%), Gaps = 44/458 (9%)
Query: 4 AFCAKTSQTP-------LRQNLRNPKTRIPET---SFYFKPKTRHFSSKNAQSVQVLNTQ 53
AF + + P RQ + KT +P + F + S+ + L +
Sbjct: 85 AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVK 144
Query: 54 NTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNIC--------------VDED-AL 98
S +S LN C G + +A D M E N DE L
Sbjct: 145 TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFEL 204
Query: 99 VNLVRLCEWKRGYDE------------------GLYLHSVVSKTMSHLSVRLGNAFLSMF 140
L+R E + +E G +HS+ K V + NA ++M+
Sbjct: 205 FKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMY 264
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTF 200
VK G L A F +++ +W+ ++ G+A+ G D+AL L+ M G + P +T
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL-PSEFTL 323
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
V+ C + G+++H + ++ GYE + V++AL+ MY KCG +V AR F+ + +
Sbjct: 324 VGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQ 383
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
D + W ++I+GY +NG+Y L L+ M+ V P+ +T++SV+ A + G+++
Sbjct: 384 PDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQM 443
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H +IK FS ++ + + L MY G+ ++G ++F RM ++DV+SW MIS +
Sbjct: 444 HAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRG 503
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
++ +E ++ M EG+ PD +T ++LSAC+ +G +D G
Sbjct: 504 NEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG 541
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR +H ++ G + N LI +Y + + VF + +KDVVSW +I+ +
Sbjct: 29 GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQ 88
Query: 377 SVLPDKAVETYQM-----MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
++ + M + +P+ T+ V +A + L + G + H LA++T
Sbjct: 89 QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL---RLNNRSFEALIFF 488
+ A++L++MY K + +A ++F ++P++N +SW ++I G L + +FE
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLM 208
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
R N S+LSA + G+++H+ A++ G+ + NAL+ MYV+CG
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCG 268
Query: 549 RMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++ A F S ++ W+ ++TG+A+ G A + F M S
Sbjct: 269 SLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ + L C L G LH + TG S IAN+LI++Y+KC KA VF
Sbjct: 10 HLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFD 69
Query: 459 QIPDKNVISWTSIILGL---RLNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARI 512
I +K+V+SW +I + + S + FR++++ K PN+ TL + +A + +
Sbjct: 70 SINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTL 129
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G++ HA A++ + D F ++LL+MY + G + A + F+ ER+ +W ++
Sbjct: 130 SDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMI 189
Query: 572 TGYAERGQGALAEEFFRKM 590
+GYA + A E F+ M
Sbjct: 190 SGYASQELADEAFELFKLM 208
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+L L + ++ L C R L G+ +HA L G + N+L+++Y +C
Sbjct: 3 LLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFS 62
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALA---EEFFRKMIDSKG----NWRKLMGL 603
A F+S N +DV +WN L+ ++++ A + FR+++ + N L G+
Sbjct: 63 KANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGV 122
Query: 604 F 604
F
Sbjct: 123 F 123
>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 250/474 (52%), Gaps = 8/474 (1%)
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+T + L+ +L A+ + + G LGHA VF M R+ F+WN +I G AG F EAL
Sbjct: 73 RTSTVLAAQLVRAYARL--RDGGLGHAVRVFDGMLTRNSFAWNAVIKGLVDAGRFSEALQ 130
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV----IRFGYEADVDVVNAL 238
Y M G V D +T+P VL+ C + +++G++V +V R + +V V AL
Sbjct: 131 WYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGIAKCNVFVQCAL 190
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ M+ KCG L AR VF+ M RD +W AMI G G++++ + L M+ PD
Sbjct: 191 VDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDS 250
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
M L++VI A V + + G +HG V+K G D V N L+ MY + +F
Sbjct: 251 MILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWS 310
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
++ KDV+SW+T+I+ + + +V + M A G P+ T+AS+L + + L G
Sbjct: 311 IDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYG 370
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H ++R GL +A+ LID YS+ I +A VF P +++ S+I G +N
Sbjct: 371 KEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVN 430
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
S AL R ++ L+P+ VT+VS+L C + L+ GKE+HA+A+R ++ +
Sbjct: 431 EDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVS 490
Query: 538 NALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
NAL DMY +CG ++ A+ F ER+ +N L++ + G A F M
Sbjct: 491 NALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLM 544
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 271/545 (49%), Gaps = 16/545 (2%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLY 116
N+ + L G +AL+ Y D + + ++ D +++ C E R E +
Sbjct: 113 NAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENV- 171
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+ +++ ++ +V + A + MF K G LG A VF M RDL +W +IGG G
Sbjct: 172 -EADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGD 230
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ E ++L +RM G +PD V+ CG V +L+ G +H V++ G D V+N
Sbjct: 231 WLEVMTLLKRM-KSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLN 289
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KC L A +F + +D ISW+ +I+G+ +N Y + LF M V P
Sbjct: 290 ALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKP 349
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ TL+S++ + + + G+E+H + ++ G + + LI Y G+ +E E VF
Sbjct: 350 NSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVF 409
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
D+V +MI Y + + A+ + + EG PD +T+ SVL C L
Sbjct: 410 EFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLL 469
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +LH A+R + S ++N L DMY KC C++ A E+F + ++N +++ ++I L
Sbjct: 470 QGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLG 529
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDG 534
+ + +A F M + + P+ VT V++LS C+ G + G + LR ++ D
Sbjct: 530 KHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDK 589
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNI---LLTGYAERGQGALAEEFFRKMI 591
+ ++D+Y R GR+ AW+ F +N ++V ++ LL+ E + +AE ++
Sbjct: 590 EHYSCIVDLYSRSGRLDAAWS-FIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIF 648
Query: 592 DSKGN 596
+ N
Sbjct: 649 EQNPN 653
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 305/611 (49%), Gaps = 19/611 (3%)
Query: 10 SQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSV-QVLNTQNTSSI--ATKNPNSR 66
+ T LRQ L I T+ + P S+K +S Q+ + Q+++S+ +P+S
Sbjct: 10 ASTTLRQ-LAQLHAHIIVTALHNDPLP---STKLIESYSQLGDLQSSTSVFRTFHSPDSF 65
Query: 67 LNELCL-----NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+ + L NG ++A+ M I + +++R C G +H +
Sbjct: 66 MWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRI 125
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K+ + + A LS++ + G L A VFG+M RDL SW+ +I + G +E L
Sbjct: 126 IKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGL 185
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ M GG PD V+ CG + L+ K H ++++ G E D V ++LI M
Sbjct: 186 DAFRCMVSEGGT-PDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFM 244
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG L A +VF+ + R +W AMIS Y G + L LF+ M++ V+P+ +T+
Sbjct: 245 YAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTM 304
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP-LIKMYLSFGNREEGEKVFSRME 360
++ + + + G+ VH VIK ++ P L+++Y + + EK+ +
Sbjct: 305 RIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIG 364
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ + W T+IS Y L + V+ + M+ +G MPD ++AS LSA G L LG++
Sbjct: 365 GRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQ 424
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ + + N+LI+MYSKC +D A +F Q+ K V++W S+I GL N
Sbjct: 425 IHGHVIKRPFMDEYVF-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGY 483
Query: 481 SFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S +A+ F M + V VS++ AC+ +G L GK IH + GV F+ A
Sbjct: 484 STKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETA 543
Query: 540 LLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGN 596
L+DMY +CG ++ A F N +ER V +W+ L++ Y GQ + F KM++S K N
Sbjct: 544 LVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPN 603
Query: 597 WRKLMGLFRKC 607
+M + C
Sbjct: 604 DVTVMNVLSAC 614
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 234/479 (48%), Gaps = 10/479 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + M+ K G L A VF + R +W +I Y G+ EAL+L+ M V
Sbjct: 239 SSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEV 297
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRAR 252
+P+ T +LR+C + L+ GK VH VI+ +A++D + L+ +Y
Sbjct: 298 EPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCE 357
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + R WN +IS Y + G + + LF+ M++ PD +L+S +SAS G
Sbjct: 358 KILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEG 417
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +LG ++HG+VIK F D+ V N LI MY G + +F +ME K VV+W +MIS
Sbjct: 418 ELQLGLQIHGHVIKRPFMDEY-VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMIS 476
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ KA+ + +M E+ SV+ AC+ LG L+ G +H + G+
Sbjct: 477 GLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK 536
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I I L+DMY+KC + A VF + +++V+SW+S+I ++ + E + F KM+
Sbjct: 537 CIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKML 596
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ +KPN VT++++LSAC+ G + G G+ ++D+ R G +
Sbjct: 597 ESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLD 656
Query: 552 PAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM----IDSKGNWRKLMGLF 604
A+ + S W LL G + +A+ R++ D G++ L ++
Sbjct: 657 EAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIY 715
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 204/430 (47%), Gaps = 4/430 (0%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
+N + +T + ++ L G L++AL SMQ+ + + + ++R C
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLR 318
Query: 113 EGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
EG +H VV K ++ LG L ++ + ++ R + WN LI Y
Sbjct: 319 EGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ G E + L+ RM G PD ++ L G +L+ G ++H HVI+ + D
Sbjct: 379 AQKGLLKETVDLFVRM-QKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MD 436
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V N+LI MY KCG + A ++FD M + ++WN+MISG +NG K + LF +M
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYV 496
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ + SVI A +G + G+ +H +I G + + L+ MY G+ +
Sbjct: 497 TCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQT 556
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++VF M + VVSW+++IS Y + + + M G P+++T+ +VLSAC+
Sbjct: 557 AQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSH 616
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTS 470
G + G+ G+ ++D+ S+ +D+A E+ +P S W +
Sbjct: 617 AGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGA 676
Query: 471 IILGLRLNNR 480
++ G R++ R
Sbjct: 677 LLNGCRIHQR 686
>gi|242074230|ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
gi|241938234|gb|EES11379.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
Length = 818
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 240/444 (54%), Gaps = 11/444 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++MF + GDL AW VF ++ WN +I GY + G F EA+ L R+ V D
Sbjct: 285 IAMFSELGDLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIRLMGSKEVPLD 344
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF L D + G+++H ++I+ G A + V+ NAL+ MY +CG++ A +
Sbjct: 345 VVTFLSALTAASQSQDGRLGQQLHGYLIK-GTHATLPVILGNALVVMYSRCGNVQTAFKL 403
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D +SWN M++ + +N ++GL+L M++ D +TL++V+SA+ GD
Sbjct: 404 FDRLPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDL 463
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMIS 372
++G++ HGY+++ G D+ + + LI MY G E ++VF + +D V+W MI+
Sbjct: 464 QIGKQAHGYLVRRGIEDE-GLESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIA 522
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLI 431
Y S P++A+ T++ M P +T+ASVL AC L G L G ++H A+R L
Sbjct: 523 GYTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLD 582
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + L+DMYSKC I A VF + +K+ +S+T++I GL + AL F M
Sbjct: 583 TNVFVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYM 642
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
LKP+ VT ++ +SAC G + G ++ GVA ++DM + GR+
Sbjct: 643 QEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTPQHRCCIVDMLAKAGRV 702
Query: 551 KPAW---NQFNSNERDVSAWNILL 571
+ A+ + +S W LL
Sbjct: 703 EEAYEFVQELGEEGNFISIWGSLL 726
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 240/452 (53%), Gaps = 20/452 (4%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD----VYTFPCVLRTC 207
+F M R+ SWN L G Y K G EAL L+ RM G+KP V FP V +
Sbjct: 198 LFDVMPKRNAVSWNTLFGWYVKTGRPQEALELFARML-EDGIKPTPVSFVNVFPAVAKE- 255
Query: 208 GGVPDLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
D ++ +++ G Y D+ VV++ I M+ + GDL A VF+ K++
Sbjct: 256 ----DPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEV 311
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WN MI+GY +NG++ + + L I +M V D +T S ++A+ D +LG+++HGY+
Sbjct: 312 WNTMITGYVQNGKFAEAMDLVIRLMGSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYL 371
Query: 325 IKMGFSD-DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
IK + V + N L+ MY GN + K+F R+ KD+VSW TM++ + + +
Sbjct: 372 IKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEG 431
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M+ D +T+ +VLSA + G+L +G + H +R G I + + LIDM
Sbjct: 432 LLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRG-IEDEGLESYLIDM 490
Query: 444 YSKCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
Y+K I+ A VF + ++ ++W ++I G + + +A++ FR M+ +L+P SV
Sbjct: 491 YAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSV 550
Query: 501 TLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
TL S+L AC +G +C GK+IH ALR + + F+ AL+DMY +CG + A + F
Sbjct: 551 TLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAV 610
Query: 560 N-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
E+ ++ +++G + G G A F M
Sbjct: 611 MIEKSTVSYTTMISGLGQHGFGERALSLFYYM 642
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 223/448 (49%), Gaps = 20/448 (4%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHV 221
+N L+ Y + AL LY + P D YT+ C L C L+ GK VH
Sbjct: 98 YNALLIAYVARSLPEHALRLYALLNHAARPAPRSDHYTYSCALTACARTRRLRLGKSVHA 157
Query: 222 HVIRFGYE-ADVDVV-NALITMYVKC------GDLVRARLVFDGMPKRDRISWNAMISGY 273
H++R D V+ N+L+ +Y C G + R +FD MPKR+ +SWN + Y
Sbjct: 158 HLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDVVRRLFDVMPKRNAVSWNTLFGWY 217
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSD 331
+ G + L LF M E + P ++ +V A D ++G ++K G + +
Sbjct: 218 VKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVA-KEDPSWSFVLYGLLVKHGREYVN 276
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ V + I M+ G+ + +VF K+ W TMI+ Y + +A++ +
Sbjct: 277 DLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIRLM 336
Query: 392 AEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMR-TGLISYIIIANTLIDMYSKCKC 449
+P D +T S L+A + + LG +LH ++ T +I+ N L+ MYS+C
Sbjct: 337 GSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKGTHATLPVILGNALVVMYSRCGN 396
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
+ A ++F ++P+K+++SW +++ N+ E L+ +M + +SVTL ++LSA
Sbjct: 397 VQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAADSVTLTAVLSA 456
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERDVS 565
+ G L GK+ H + +R G+ +G L + L+DMY + GR++ A ++ + + +RD
Sbjct: 457 ASNTGDLQIGKQAHGYLVRRGIEDEG-LESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEV 515
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDS 593
WN ++ GY + GQ A FR M+ +
Sbjct: 516 TWNAMIAGYTQSGQPEQAILTFRAMLQA 543
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 197/373 (52%), Gaps = 8/373 (2%)
Query: 114 GLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH ++ T + L V LGNA + M+ + G++ A+ +F ++ ++D+ SWN ++ +
Sbjct: 364 GQQLHGYLIKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFV 423
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F E L L +M D T VL DL+ GK+ H +++R G E D
Sbjct: 424 QNDFDLEGLLLVYQM-QKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIE-DE 481
Query: 233 DVVNALITMYVKCGDLVRARLVFD--GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI MY K G + A+ VFD G KRD ++WNAMI+GY ++G+ + ++ F M
Sbjct: 482 GLESYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAML 541
Query: 291 EVLVDPDFMTLSSVISASE-LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ ++P +TL+SV+ A + L G G+++H + ++ +V V L+ MY G
Sbjct: 542 QASLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEI 601
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF+ M K VS+TTMIS ++A+ + M+ +G PD +T + +SAC
Sbjct: 602 STAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISAC 661
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVIS- 467
G +D G+ L++ G+ ++DM +K +++A E ++ ++ N IS
Sbjct: 662 NYSGLVDEGLALYRSMETFGVAVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGNFISI 721
Query: 468 WTSIILGLRLNNR 480
W S+++ + ++
Sbjct: 722 WGSLLVSCKAQDK 734
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 367 WTTMISCYEGSVLPDKAVETYQMM-EAEGSMP--DEITIASVLSACACLGNLDLGIKLHQ 423
+ ++ Y LP+ A+ Y ++ A P D T + L+ACA L LG +H
Sbjct: 98 YNALLIAYVARSLPEHALRLYALLNHAARPAPRSDHYTYSCALTACARTRRLRLGKSVHA 157
Query: 424 LAMRTG--LISYIIIANTLIDMYSKC------KCIDKALEVFHQIPDKNVISWTSIILGL 475
+R L ++ N+L+++Y+ C +D +F +P +N +SW ++
Sbjct: 158 HLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGVDVVRRLFDVMPKRNAVSWNTLFGWY 217
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-- 532
R EAL F +M+ + +KP V+ V++ A A+ ++ ++ G +
Sbjct: 218 VKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVAKEDP-SWSFVLYGLLVKHGREYVN 276
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D F+ ++ + M+ G ++ AW F + +++ WN ++TGY + G+ A A + +++
Sbjct: 277 DLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEVWNTMITGYVQNGKFAEAMDLVIRLM 336
Query: 592 DSK 594
SK
Sbjct: 337 GSK 339
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVSKTMSHLSVR 131
+G EQA+ +M + ++ L +++ C+ G G +H + +V
Sbjct: 527 SGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVF 586
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + M+ K G++ A +VF M ++ S+ +I G + GF + ALSL+ M
Sbjct: 587 VGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYM-QEK 645
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+KPD TF + C + G ++ + FG ++ M K G + A
Sbjct: 646 GLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTPQHRCCIVDMLAKAGRVEEA 705
>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
Length = 587
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 255/500 (51%), Gaps = 8/500 (1%)
Query: 113 EGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
G LH++ ++ ++ + A + M+ K + + + + D+ ++ GY
Sbjct: 7 HGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGY 66
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+ EAL + R G P T V+ + D+ G+ H VIR +E D
Sbjct: 67 EQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYD 126
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ +VNA++ Y++ G + AR +F+GM ++D ++W+ M++GY ++G+ + L + M E
Sbjct: 127 LVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVE 186
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ +T+ SV+ A L D + GR VH +K+G +++V L+ MY+ EE
Sbjct: 187 AGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEE 246
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++F RM KD V+W +IS + + LPD+++ ++ M G PD +T+ VL+AC+
Sbjct: 247 AMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSE 306
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
G + LH + TG I +A L+D+YSKC + A+ VF +K+V+ W+S+
Sbjct: 307 SGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSM 366
Query: 472 ILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-G 529
I G ++ +A+ F+ M+ ++KPNS+T VS+LSAC+ G + GK I ++ G
Sbjct: 367 ISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYG 426
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFR 588
V + +A++D+ R G ++ A + N R D W LL ++E
Sbjct: 427 VVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAACRAHHDTEMSEVVAA 486
Query: 589 KMI----DSKGNWRKLMGLF 604
K++ D G + L ++
Sbjct: 487 KLLKLDPDHAGYYNLLNNIY 506
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 212/406 (52%), Gaps = 10/406 (2%)
Query: 210 VPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+P L G+ +H IR D V AL+ MY KC +V + ++ + D + +
Sbjct: 2 LPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTS 61
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASELVGDEKLGREVHGYVI 325
M++GY +N + L F R V+ P +TL SVISA+ + D G+ H +VI
Sbjct: 62 MVTGYEQNRMAAEALEFF--SRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVI 119
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
+ F D+ + N ++ Y+ G + ++F M KDVV+W+ M++ Y S +A+
Sbjct: 120 RNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALT 179
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
Y+ M G P+ +T+ SV+ AC+ +++ G ++H +A++ G + +A L+DMY
Sbjct: 180 AYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYM 239
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVS 504
KC C ++A+++F ++ K+ ++W +I G N E++ F+ M+ P++VT+V
Sbjct: 240 KCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVK 299
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERD 563
+L+AC+ G + +H + + G F+ AL+D+Y +CG + A F S E+D
Sbjct: 300 VLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKD 359
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
V W+ +++GY G G A E F+ M+ S K N + + C
Sbjct: 360 VVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSAC 405
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 211/411 (51%), Gaps = 3/411 (0%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+++ + G H+ V + + L NA L +++ G + A +F M
Sbjct: 95 LVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMT 154
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
++D+ +W+ ++ GY ++G EAL+ Y++M G+KP+ T V++ C PD++ G+
Sbjct: 155 EKDVVTWSCMVTGYVQSGDICEALTAYKKMVE-AGIKPNAVTVVSVVQACSLAPDIEEGR 213
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH ++ G E ++ V AL+ MY+KC A +F M K+D ++W +ISG+ +NG
Sbjct: 214 RVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNG 273
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + +F M PD +T+ V++A G + +HGY++ GF D + V
Sbjct: 274 LPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAA 333
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ +Y GN +VF KDVV W++MIS Y L +AVE +QMM A P
Sbjct: 334 ALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKP 393
Query: 398 DEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+ +T SVLSAC+ G + G ++ + + G++ + + ++D+ + + +A ++
Sbjct: 394 NSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKL 453
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
H + +W +++ R ++ + + + K +L L P+ ++L+
Sbjct: 454 LHGNGRADAHTWCALLAACRAHHDTEMSEVVAAK-LLKLDPDHAGYYNLLN 503
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G + +AL M E I + +V++V+ C +EG +H + K L + +
Sbjct: 171 SGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTV 230
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++K A +F +M +D +W V+I G+ + G DE++ +++ M + GG
Sbjct: 231 ATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLF-GG 289
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD T VL C +++ +H +++ G+ + V AL+ +Y KCG+L A
Sbjct: 290 PFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAV 349
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ ++D + W++MISGY +G + + LF MM V P+ +T SV+SA G
Sbjct: 350 RVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSG 409
Query: 313 DEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+ + + ++ G + + ++ + G +E K+ D +W ++
Sbjct: 410 LVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALL 469
Query: 372 S 372
+
Sbjct: 470 A 470
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 275/543 (50%), Gaps = 13/543 (2%)
Query: 62 NPN---SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
NPN RL + NG L +A+ L+ M D ++ C R +D G +H
Sbjct: 30 NPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVH 89
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFF 177
++++ L N+ +S++ K G A +F M RDL SW+ ++ +A
Sbjct: 90 EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMG 149
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVN 236
AL + M G P+ Y F R C + G + VI+ GY ++DV V
Sbjct: 150 FRALLTFVDMI-ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGC 208
Query: 237 ALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
LI M+VK GDLV A VF+ MP+R+ ++W MI+ + G + + LF+ M +
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYE 268
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF---GNREEG 352
PD TLS VISA + LG+++H I+ G + D V LI MY G+
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAA 328
Query: 353 EKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
K+F ++ +V SWT MI+ Y + ++A++ ++ M +P+ T +S L ACA
Sbjct: 329 RKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L +G ++ A++ G S +AN+LI MY++ ID A + F + +KN+IS+ ++
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTV 448
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I N S EAL F ++ + ++ T S+LS A IG + G++IHA ++ G+
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRK 589
+ + NAL+ MY RCG ++ A+ F E R+V +W ++TG+A+ G A E F K
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 590 MID 592
M++
Sbjct: 569 MLE 571
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 242/474 (51%), Gaps = 10/474 (2%)
Query: 130 VRLGNAFLSMFVK-FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V +G + MFVK GDL A+ VF KM +R+ +W ++I + G+ EA+ L+ M
Sbjct: 204 VCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMI 263
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC--- 245
+ G +PD +T V+ C + L G+++H IR G D V LI MY KC
Sbjct: 264 F-SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD 322
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSV 304
G + AR +FD + + SW AMI+GY + G Y + L LF M V P+ T SS
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A + ++G +V + +K+GFS V N LI MY G ++ K F + K++
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+S+ T+I Y ++ ++A+E + +E +G T AS+LS A +G + G ++H
Sbjct: 443 ISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHAR 502
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+++GL + N LI MYS+C I+ A +VF + D+NVISWTSII G + + +A
Sbjct: 503 VIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQA 562
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLD 542
L F KM+ ++PN VT +++LSAC+ +G + G K + GV ++D
Sbjct: 563 LELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVD 622
Query: 543 MYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ R G + A NS + D W L G L + + +I+ +
Sbjct: 623 ILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 213/401 (53%), Gaps = 10/401 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKF---GDLGHAWYVFGKMCDRDLFSWNVLIGG 170
G LHS + L +G ++M+ K G + A +F ++ D ++FSW +I G
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 171 YAKAGFFDE-ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y + G +DE AL L++ M + V P+ +TF L+ C + L+ G++V H ++ G+
Sbjct: 350 YVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V N+LI+MY + G + AR FD + +++ IS+N +I Y +N + L LF +
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + T +S++S + +G G ++H VIK G + SVCN LI MY GN
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +VF ME ++V+SWT++I+ + +A+E + M EG P+E+T +VLSAC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSAC 588
Query: 410 ACLGNLDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVI 466
+ +G ++ G K H +M T G+I + ++D+ + + +A++ + +P K + +
Sbjct: 589 SHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADAL 647
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W + + R++ + E KM++ +P+ +LS
Sbjct: 648 VWRTFLGACRVHG-NLELGKHAAKMIIEQEPHDPAAYILLS 687
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 19/313 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N + E+AL+ + +++ + +L+ +G +H+ V K
Sbjct: 446 NTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIK 505
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L+ + NA +SM+ + G++ A+ VF M DR++ SW +I G+AK GF +AL L
Sbjct: 506 SGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALEL 565
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMY 242
+ +M GV+P+ T+ VL C V + G K G ++ ++ +
Sbjct: 566 FHKML-EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDIL 624
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAM-----ISGYFENGEYMKGLMLFIMMREVLVDP 296
+ G L A + MP K D + W + G E G++ +++ + DP
Sbjct: 625 GRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMII----EQEPHDP 680
Query: 297 DFMTLSSVISAS-----ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
L S + AS E+ K +E +IK V V N + K Y+ + +
Sbjct: 681 AAYILLSNLYASISKWDEVSNIRKAMKE--KXLIKEAGCSWVEVENKVHKFYVGDTSHPK 738
Query: 352 GEKVFSRMESKDV 364
+++ +++ V
Sbjct: 739 AAEIYDELQNLSV 751
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ T L C R + G +H + + D N+L+ +Y +CG+ + A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 557 FN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F + RD+ +W+ +++ +A G A F MI++
Sbjct: 124 FRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 244/457 (53%), Gaps = 56/457 (12%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
L+++L A+ + G+ A Y+F + ++++ +NV+I Y + EALS++Q M
Sbjct: 73 LAIKLMRAYSAQ----GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVM 128
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
PD YTFPCVL+ C G+ +L+ G +VH +++ G + ++ + NAL+ MY KCG
Sbjct: 129 LSCA-FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L AR V D MP RD +SWN+M++GY ++G++ L + M + ++ D T++S+
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL--- 244
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+P++ Y S N + +F RM K+++SW
Sbjct: 245 -----------------------------SPVV-CYTSLENVQYIHNMFERMTKKNLISW 274
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI+ Y + +P++AV + ME G PD +TIAS+L AC L L LG +LH+ +
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L +++ N L+DMY+KC C+++A +VF ++ ++V+SWTS++ + + ++A+
Sbjct: 335 GNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
F KM+ P+S+ VS+LSAC+ G L G+ H R+ G +P ++
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR----HYFRMMTEQYGIVPRIEHFACMV 450
Query: 542 DMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTG 573
D++ R G ++ A++ NER W LL+
Sbjct: 451 DLFGRAGEVEEAYSFIKQMPMEPNER---VWGALLSA 484
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 36/389 (9%)
Query: 211 PDLKRGKEVHVH-VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
P +K ++H VI D + L+ Y G+ AR +FD +++ + +N M
Sbjct: 49 PGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVM 108
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I Y N Y++ L +F +M +PD T V+ A + + ++G +VH ++K+G
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ + N L+ MY G E KV +M +DVVSW +M++ Y S D A+E +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M++ D T+AS LS C +L+ +H +
Sbjct: 229 MDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNM------------------------- 262
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
F ++ KN+ISW +I N+ EA+ F +M +KP++VT+ S+L A
Sbjct: 263 -------FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAW 567
C + AL G+ +H + + + + L NALLDMY +CG ++ A + F+ RDV +W
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW 375
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSKGN 596
+++ Y GQG A F KM+DS N
Sbjct: 376 TSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 40/371 (10%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H + K ++ +GNA ++M+ K G L A V +M RD+ SWN ++ GYA+
Sbjct: 156 GLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQ 215
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G FD+AL + + M + ++A
Sbjct: 216 SGQFDDALEICKEM----------------------------------DSLNLNHDAGTM 241
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + Y ++ +F+ M K++ ISWN MI+ Y N + + LF+ M E
Sbjct: 242 ASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG 301
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T++S++ A + LGR +H Y+ K ++ + N L+ MY G EE
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEAR 361
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF +M +DVVSWT+M+S Y S AV + M G PD I SVLSAC+ G
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 414 NLDLGIKLHQLAMRT---GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
LD G H M T G++ I ++D++ + +++A Q+P + N W
Sbjct: 422 LLDQG--RHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWG 479
Query: 470 SIILGLRLNNR 480
+++ R++++
Sbjct: 480 ALLSACRVHSK 490
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 5/203 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A+ M+E + D + +L+ C G LH + K ++ L
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLL 343
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K G L A VF KM RD+ SW ++ Y ++G +A++L+ +M G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKML-DSG 402
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD F VL C L +G+ + ++G ++ ++ ++ + G++ A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 252 RLVFDGMP--KRDRISWNAMISG 272
MP +R+ W A++S
Sbjct: 463 YSFIKQMPMEPNERV-WGALLSA 484
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 249/482 (51%), Gaps = 8/482 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKF--GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
LH+ + H S L + + + G LGHA VF M R+ F+WN +I G A
Sbjct: 79 LHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLVDA 138
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV----IRFGYEA 230
G F EAL Y M G V D +T+P VL+ C + ++++G++V +V R +
Sbjct: 139 GRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIARGIAKG 198
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V V AL+ M+ KCG L AR +F+ M RD SW AMI G G++++ + L M+
Sbjct: 199 NVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMK 258
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
PD M ++VI A V + + G +HGY +K G DD+ V N L+ MY +
Sbjct: 259 SEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLD 318
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+F ++ KDV SW+T+I+ + + + + +V + M A G P+ TIAS+L + +
Sbjct: 319 MAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSIS 378
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L L G ++H ++R L +A+ LID Y + I A VF P +++ S
Sbjct: 379 ELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNS 438
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G +N S AL R ++ L+P+ VT+VS+L C + L+ GKE+HA+A+R
Sbjct: 439 MIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHN 498
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFR 588
++ + NAL DMY +CG ++ A F ER+ +N L++ + G A F
Sbjct: 499 ISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFD 558
Query: 589 KM 590
M
Sbjct: 559 LM 560
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 259/514 (50%), Gaps = 9/514 (1%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLH 118
N+ + L G +AL+ Y D +++ ++ D +++ C E ++G +
Sbjct: 129 NAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVE 188
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ +++ ++ +V + A + MF K G LG A +F M RDL SW +IGG + G +
Sbjct: 189 TDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWL 248
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
E ++L +RM G +PD F V+ CG V +L+ G +H + ++ G D+ V NAL
Sbjct: 249 EVMTLLKRM-KSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNAL 307
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY KC L A +F + +D SW+ +I+G+ +N Y + LF M + P+
Sbjct: 308 VDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNS 367
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++S++ + + + G+E+H + ++ + + LI Y G + + VF
Sbjct: 368 TTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEF 427
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
D+V +MI Y + + A+ + + EG PD +T+ SVL C L G
Sbjct: 428 KPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQG 487
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+LH A+R + S + N L DMY KC C++ A ++F + ++N +++ ++I L +
Sbjct: 488 KELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKH 547
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFL 536
+ +A I F M + + P+ VT V++LS C+ G + G + LR + D
Sbjct: 548 GHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEH 607
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNERDVSAWNIL 570
+ ++D+Y R G++ AW+ F +N ++V ++L
Sbjct: 608 YSCIVDLYSRSGKLDDAWS-FIANLQEVPEIDVL 640
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSF--GNREEGEKVFSRMESKDVVSWTTMISCYE 375
R +H ++ G+ + L++ Y G +VF M +++ +W +I
Sbjct: 77 RRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLV 136
Query: 376 GSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ +A+ Y M +GS+ D T VL ACA LG ++ G K+ Q + T + I
Sbjct: 137 DAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKV-QENVETDIARGI 195
Query: 435 IIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
N L+DM++KC C+ +A +F + +++ SWT++I G E + +
Sbjct: 196 AKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLK 255
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M +P+S+ +++ AC ++ L G +H +A++ GV D +PNAL+DMY +C
Sbjct: 256 RMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCA 315
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
R+ A + F S + +DV +W+ ++ G+++ ++ F +M+ S
Sbjct: 316 RLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVAS 361
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 273/540 (50%), Gaps = 7/540 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++A+ M I + +++R C G +H + K+ + +
Sbjct: 77 NGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVV 136
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A LS++ + G L A VFG+M RDL SW+ +I + G +E L ++ M GG
Sbjct: 137 NTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGG 196
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD V+ CG + L+ K H ++++ G E D V ++LI MY KCG L A
Sbjct: 197 T-PDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAE 255
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VF+ + R +W AMIS Y G + L LF+ M++ V+P+ +T+ ++ + +
Sbjct: 256 IVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLS 315
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNP-LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+ VH VIK ++ P L+++Y + + EK+ + + + W T+I
Sbjct: 316 LLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLI 375
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y L + V+ + M+ +G MPD ++AS LSA G L LG+++H ++ +
Sbjct: 376 SVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM 435
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ N+LI+MYSKC +D A +F Q+ K V++W S+I GL N S +A+ F M
Sbjct: 436 DEYVF-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 492 MLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ V VS++ AC+ +G L GK IH + GV F+ AL+DMY +CG +
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDL 554
Query: 551 KPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ A F N +ER V +W+ L++ Y GQ + F KM++S K N +M + C
Sbjct: 555 QTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSAC 614
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 236/477 (49%), Gaps = 5/477 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + T H + + + GDL + VF D F W VL+ + G
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ EA+SLY +M ++ + YTFP VLR C G DL G+ VH +I+ G++ D V
Sbjct: 80 YQEAISLYHQML-SQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+++Y + G L AR VF MP RD +SW+++IS ENGE +GL F M P
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D + + +V+ A +G +L + HGY++K G +D V + LI MY G+ E VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ + +WT MIS Y +A+ + M+ P+ +T+ +L +C L L
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLR 318
Query: 417 LGIKLHQLAMRTGLISYI-IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G +H + ++ L + + + TL+++Y+ D ++ H+I + + W ++I
Sbjct: 319 EGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378
Query: 476 RLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
E + +F R P+S +L S LSA G L G +IH H ++ D
Sbjct: 379 AQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MDE 437
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ N+L++MY +CG + A+ F+ E + V WN +++G ++ G A F M
Sbjct: 438 YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLM 494
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 234/479 (48%), Gaps = 10/479 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + M+ K G L A VF + R +W +I Y G+ EAL+L+ M V
Sbjct: 239 SSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSM-QKTEV 297
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVRAR 252
+P+ T +LR+C + L+ GK VH VI+ +A++D + L+ +Y
Sbjct: 298 EPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCE 357
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + R WN +IS Y + G + + LF+ M++ PD +L+S +SAS G
Sbjct: 358 KILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEG 417
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +LG ++HG+VIK F D+ V N LI MY G + +F +ME K VV+W +MIS
Sbjct: 418 ELQLGLQIHGHVIKRPFMDEY-VFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMIS 476
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ KA+ + +M E+ SV+ AC+ LG L+ G +H + G+
Sbjct: 477 GLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRK 536
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I I L+DMY+KC + A VF + +++V+SW+S+I ++ + E + F KM+
Sbjct: 537 CIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKML 596
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ +KPN VT++++LSAC+ G + G G+ ++D+ R G +
Sbjct: 597 ESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLD 656
Query: 552 PAWN--QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM----IDSKGNWRKLMGLF 604
A+ + S W LL G + +A+ R++ D G++ L ++
Sbjct: 657 EAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIY 715
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 204/430 (47%), Gaps = 4/430 (0%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
+N + +T + ++ L G L++AL SMQ+ + + + ++R C
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLR 318
Query: 113 EGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
EG +H VV K ++ LG L ++ + ++ R + WN LI Y
Sbjct: 319 EGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ G E + L+ RM G PD ++ L G +L+ G ++H HVI+ + D
Sbjct: 379 AQKGLLKETVDLFVRM-QKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPF-MD 436
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V N+LI MY KCG + A ++FD M + ++WN+MISG +NG K + LF +M
Sbjct: 437 EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYV 496
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ + SVI A +G + G+ +H +I G + + L+ MY G+ +
Sbjct: 497 TCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQT 556
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++VF M + VVSW+++IS Y + + + M G P+++T+ +VLSAC+
Sbjct: 557 AQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSH 616
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTS 470
G + G+ G+ ++D+ S+ +D+A E+ +P S W +
Sbjct: 617 AGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGA 676
Query: 471 IILGLRLNNR 480
++ G R++ R
Sbjct: 677 LLNGCRIHQR 686
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 5/382 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ ++H H+I D LI Y + GDL + VF D W ++
Sbjct: 14 LRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKS 73
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ NG Y + + L+ M + + T SV+ A GD +G+ VHG +IK GF D
Sbjct: 74 HVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMD 133
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V L+ +Y G + KVF M +D+VSW+++IS + ++ ++ ++ M +
Sbjct: 134 PVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVS 193
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD + + +V+ AC LG L L H ++ G+ + + ++LI MY+KC +
Sbjct: 194 EGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRS 253
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A VF + ++ +WT++I L EAL F M ++PNSVT+ IL +C
Sbjct: 254 AEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTN 313
Query: 512 IGALMCGKEIHAHALR--IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ L GK +H ++ + D P LL++Y + + R ++ WN
Sbjct: 314 LSLLREGKSVHCVVIKNDLDANLDCLGPT-LLELYAATAKHDLCEKILHEIGGRGIAVWN 372
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
L++ YA++G + F +M
Sbjct: 373 TLISVYAQKGLLKETVDLFVRM 394
>gi|326487434|dbj|BAJ89701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 633
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 255/498 (51%), Gaps = 6/498 (1%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY--LH 118
K+ +S + L G + L+ M+ + V + L ++++ C R D G H
Sbjct: 113 KSASSAILALAHAGRHAEVLELFCRMRRDGLPVSKFMLPSVLKAC--ARLQDSGTLRAAH 170
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+VV K V + A +S +V FG + A F +M + ++ SW+V+IGGY ++ +D
Sbjct: 171 AVVVKCALCRHVVVATALVSAYVGFGLMDDAANAFAEMDEANMVSWSVIIGGYVRSCRWD 230
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EA + M GV P ++ CG L RGK++H + G+E + V N +
Sbjct: 231 EAWDAFSTMRR-AGVLPVDSVLVMAIQVCGASLCLVRGKQLHGLAVALGFERNTTVWNCI 289
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
I MY KCGD+ R VF+ M RD++SWN +IS Y G + L + I M++ D
Sbjct: 290 IDMYGKCGDMGGCRAVFETMVDRDQVSWNTIISSYVRLGLCEEALDMVIQMQQCGFTVDR 349
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
TL S ++A + D G HGY+I+ D + L+ MY G E VF R
Sbjct: 350 FTLGSGVAACAHLADIDSGSAFHGYLIRRVLDTDAIRGSALVDMYGKCGLMEHARLVFDR 409
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M+ ++ V+W ++S Y + D A++ ++ ME+ P++ T ++L C + G
Sbjct: 410 MDERNYVAWDALLSGYVENGQVDLALKVFRQMESANIKPNQHTFVNLLKLCGNRRYTEYG 469
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H ++ +++ LIDMY+KC CI+ A +F ++ ++N+ISW +++ G +
Sbjct: 470 RQIHAHTIKVIHQMNVVLETELIDMYAKCGCIEVARLLFVRMNERNLISWNALLSGYVGD 529
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ ++ +R+M L ++P+ TL +LS C G L G++IHAH ++IG + L
Sbjct: 530 GQPGASINIYRQMELACIRPDQYTLAGLLSLCRYQGLLRYGRQIHAHVIKIGSDTNVVLQ 589
Query: 538 NALLDMYVRCGRMKPAWN 555
L+ MYVRC + + A N
Sbjct: 590 TLLVHMYVRCRQWRDAEN 607
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 228/468 (48%), Gaps = 10/468 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD-LFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ + GN F M G+ A + G+ R S + I A AG E L L+ RM
Sbjct: 79 TTKAGNPFDEMLRPGGEGAGARGLPGRAPPRSGEKSASSAILALAHAGRHAEVLELFCRM 138
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G+ + P VL+ C + D + H V++ V V AL++ YV G
Sbjct: 139 RR-DGLPVSKFMLPSVLKACARLQDSGTLRAAHAVVVKCALCRHVVVATALVSAYVGFGL 197
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A F M + + +SW+ +I GY + + + F MR V P S ++ A
Sbjct: 198 MDDAANAFAEMDEANMVSWSVIIGGYVRSCRWDEAWDAFSTMRRAGVLP---VDSVLVMA 254
Query: 308 SELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++ G G+++HG + +GF + +V N +I MY G+ VF M +D
Sbjct: 255 IQVCGASLCLVRGKQLHGLAVALGFERNTTVWNCIIDMYGKCGDMGGCRAVFETMVDRDQ 314
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSW T+IS Y L ++A++ M+ G D T+ S ++ACA L ++D G H
Sbjct: 315 VSWNTIISSYVRLGLCEEALDMVIQMQQCGFTVDRFTLGSGVAACAHLADIDSGSAFHGY 374
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+R L + I + L+DMY KC ++ A VF ++ ++N ++W +++ G N + A
Sbjct: 375 LIRRVLDTDAIRGSALVDMYGKCGLMEHARLVFDRMDERNYVAWDALLSGYVENGQVDLA 434
Query: 485 LIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L FR+M N+KPN T V++L C G++IHAH +++ + L L+DM
Sbjct: 435 LKVFRQMESANIKPNQHTFVNLLKLCGNRRYTEYGRQIHAHTIKVIHQMNVVLETELIDM 494
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y +CG ++ A F NER++ +WN LL+GY GQ + +R+M
Sbjct: 495 YAKCGCIEVARLLFVRMNERNLISWNALLSGYVGDGQPGASINIYRQM 542
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 193/391 (49%), Gaps = 7/391 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A +M+ + + LV +++C G LH + + + N
Sbjct: 230 DEAWDAFSTMRRAGVLPVDSVLVMAIQVCGASLCLVRGKQLHGLAVALGFERNTTVWNCI 289
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K GD+G VF M DRD SWN +I Y + G +EAL + +M G D
Sbjct: 290 IDMYGKCGDMGGCRAVFETMVDRDQVSWNTIISSYVRLGLCEEALDMVIQMQQCG-FTVD 348
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T + C + D+ G H ++IR + D +AL+ MY KCG + ARLVFD
Sbjct: 349 RFTLGSGVAACAHLADIDSGSAFHGYLIRRVLDTDAIRGSALVDMYGKCGLMEHARLVFD 408
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ ++W+A++SGY ENG+ L +F M + P+ T +++ +L G+ +
Sbjct: 409 RMDERNYVAWDALLSGYVENGQVDLALKVFRQMESANIKPNQHTFVNLL---KLCGNRRY 465
Query: 317 ---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++H + IK+ +V + LI MY G E +F RM ++++SW ++S
Sbjct: 466 TEYGRQIHAHTIKVIHQMNVVLETELIDMYAKCGCIEVARLLFVRMNERNLISWNALLSG 525
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y G P ++ Y+ ME PD+ T+A +LS C G L G ++H ++ G +
Sbjct: 526 YVGDGQPGASINIYRQMELACIRPDQYTLAGLLSLCRYQGLLRYGRQIHAHVIKIGSDTN 585
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+++ L+ MY +C+ A V I ++N
Sbjct: 586 VVLQTLLVHMYVRCRQWRDAENVCAMIQERN 616
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 154/290 (53%), Gaps = 1/290 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL + MQ+ VD L + V C D G H + + + G
Sbjct: 328 GLCEEALDMVIQMQQCGFTVDRFTLGSGVAACAHLADIDSGSAFHGYLIRRVLDTDAIRG 387
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + M+ K G + HA VF +M +R+ +W+ L+ GY + G D AL ++++M +
Sbjct: 388 SALVDMYGKCGLMEHARLVFDRMDERNYVAWDALLSGYVENGQVDLALKVFRQM-ESANI 446
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ +TF +L+ CG + G+++H H I+ ++ +V + LI MY KCG + ARL
Sbjct: 447 KPNQHTFVNLLKLCGNRRYTEYGRQIHAHTIKVIHQMNVVLETELIDMYAKCGCIEVARL 506
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F M +R+ ISWNA++SGY +G+ + ++ M + PD TL+ ++S G
Sbjct: 507 LFVRMNERNLISWNALLSGYVGDGQPGASINIYRQMELACIRPDQYTLAGLLSLCRYQGL 566
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ GR++H +VIK+G +V + L+ MY+ + E V + ++ ++
Sbjct: 567 LRYGRQIHAHVIKIGSDTNVVLQTLLVHMYVRCRQWRDAENVCAMIQERN 616
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 8/355 (2%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P+ S ++ I G + + L LF MR + L SV+ A + D R
Sbjct: 108 PRSGEKSASSAILALAHAGRHAEVLELFCRMRRDGLPVSKFMLPSVLKACARLQDSGTLR 167
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
H V+K V V L+ Y+ FG ++ F+ M+ ++VSW+ +I Y S
Sbjct: 168 AAHAVVVKCALCRHVVVATALVSAYVGFGLMDDAANAFAEMDEANMVSWSVIIGGYVRSC 227
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
D+A + + M G +P + + + C L G +LH LA+ G + N
Sbjct: 228 RWDEAWDAFSTMRRAGVLPVDSVLVMAIQVCGASLCLVRGKQLHGLAVALGFERNTTVWN 287
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII---LGLRLNNRSFEALIFFRKMMLNL 495
+IDMY KC + VF + D++ +SW +II + L L + + +I ++ +
Sbjct: 288 CIIDMYGKCGDMGGCRAVFETMVDRDQVSWNTIISSYVRLGLCEEALDMVIQMQQCGFTV 347
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ TL S ++ACA + + G H + +R + D +AL+DMY +CG M+ A
Sbjct: 348 --DRFTLGSGVAACAHLADIDSGSAFHGYLIRRVLDTDAIRGSALVDMYGKCGLMEHARL 405
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ +ER+ AW+ LL+GY E GQ LA + FR+M + K N + L + C
Sbjct: 406 VFDRMDERNYVAWDALLSGYVENGQVDLALKVFRQMESANIKPNQHTFVNLLKLC 460
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 235/438 (53%), Gaps = 16/438 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGF-FDEALSLYQR 186
S+ N LS + D ++ +F + + +++N+++ + L LY +
Sbjct: 48 SIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQ 107
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M + + P+ +TFP V C + +++ + H V + G + D VN+++TMY +CG
Sbjct: 108 MKTLN-ISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCG 166
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVI 305
+ AR VFD + ++D +SWN+++SGY + G + + +F +RE +PD M+L SV+
Sbjct: 167 ENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVL 226
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A +GD +LGR V G+V++ G + + + LI MY G ++F M S+D +
Sbjct: 227 GACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI 286
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W IS Y + + D+A+ + M+ G P+++T+ +VLSACA +G LDLG ++ + A
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
GL I +A LIDMY+KC ++ A VF+ +P KN SW ++I L + ++ EAL
Sbjct: 347 THRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEAL 406
Query: 486 IFFRKMML---NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP----- 537
F +M + +PN +T VS+LSAC G + G + + G +P
Sbjct: 407 SLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRL----FDMMSTLFGLVPKIEHY 462
Query: 538 NALLDMYVRCGRMKPAWN 555
+ ++D+ R G + AW+
Sbjct: 463 SCMVDLLSRAGHLYEAWD 480
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 195/334 (58%), Gaps = 5/334 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++M+ + G+ G A VF ++ ++DL SWN L+ GYAK GF EA+ ++ R+ G
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD + VL CG + DL+ G+ V V+ G + + + +ALI+MY KCG+LV +R
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRR 275
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FDGMP RD I+WNA IS Y +NG + + LF M+E VDP+ +TL++V+SA +G
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+++ Y G D+ V LI MY G+ E ++VF+ M K+ SW MIS
Sbjct: 336 LDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISA 395
Query: 374 YEGSVLPDKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--G 429
+A+ ++ M EG + P++IT S+LSAC G +D G +L + M T G
Sbjct: 396 LASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDM-MSTLFG 454
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
L+ I + ++D+ S+ + +A +V ++P+K
Sbjct: 455 LVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 204/407 (50%), Gaps = 12/407 (2%)
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++ +L+ C P K +++H +F + + N L++ + D + L+F
Sbjct: 21 IFLLLSLLKQC---PSTKTLQQIHT---QFTIHS-IHKPNHLLSQSISLKDFTYSTLIFS 73
Query: 257 GM-PKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
+ P + ++N M+ +Y L L+ M+ + + P+ T V A + +
Sbjct: 74 HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++ R H V K+G +D N ++ MY G KVF + KD+VSW +++S Y
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193
Query: 375 EGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+AVE + ++ E G PDE+++ SVL AC LG+L+LG + + G+
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + LI MYSKC + + +F +P ++ I+W + I N + EA+ F M
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N + PN VTL ++LSACA IGAL GK++ +A G+ D F+ AL+DMY +CG ++
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
A FN R + ++WN +++ A G+ A F +M D G+ R
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSAR 420
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 158/341 (46%), Gaps = 46/341 (13%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE +LV+++ C + G ++ V + ++ +G+A +SM+ K G+L + +F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RD +WN I YA+ G DEA+SL+ M GV P+ T VL C + L
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSM-KENGVDPNKVTLTAVLSACASIGAL 336
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
GK++ + G + D+ V ALI MY KCG L A+ VF+ MP+++ SWNAMIS
Sbjct: 337 DLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISAL 396
Query: 274 FENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
+G+ + L LF M + P+ +T S++SA VH ++
Sbjct: 397 ASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC-----------VHAGLV------ 439
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMES-----KDVVSWTTMISCYEGSVLPDKAVET 386
+EG ++F M + + ++ M+ + E
Sbjct: 440 ------------------DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA---GHLYEA 478
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+ ++E PD +T+ ++ SAC N+D+G ++ Q+ +
Sbjct: 479 WDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 268/532 (50%), Gaps = 32/532 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVV 121
N+ ++ + G + +++ M +L I + +LV C + G + EG+ +H V
Sbjct: 142 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG-RSGSMFREGVQVHGFV 200
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+K+ V + A L ++ +G + + VF +M DR++ SW L+ GY+ G +E +
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+Y+ D G+++ V++ G E+ + V N+LI+M
Sbjct: 261 DIYK--------------------------DESLGRQIIGQVVKSGLESKLAVENSLISM 294
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
G++ A +FD M +RD ISWN++ + Y +NG + +F +MR + + T+
Sbjct: 295 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 354
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+++S V +K GR +HG V+KMGF V VCN L++MY G E VF +M +
Sbjct: 355 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SW ++++ + A+ M + G + +T S L+AC + G L
Sbjct: 415 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 474
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H L + +GL II N L+ MY K + ++ V Q+P ++V++W ++I G +
Sbjct: 475 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 534
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNA 539
+AL F+ M + + N +T+VS+LSAC G L+ GK +HA+ + G D + N+
Sbjct: 535 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 594
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L+ MY +CG + + + FN + R++ WN +L A G G + KM
Sbjct: 595 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 646
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 241/486 (49%), Gaps = 6/486 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLG--NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
DE L + S L +L N+ +SM G++ +A Y+F +M +RD SWN +
Sbjct: 265 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
YA+ G +E+ ++ M + + T +L G V K G+ +H V++ G++
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
+ V V N L+ MY G V A LVF MP +D ISWN++++ + +G + L L M
Sbjct: 384 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+++T +S ++A + GR +HG V+ G + + N L+ MY G
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +V +M +DVV+W +I Y PDKA+ +Q M EG + IT+ SVLSAC
Sbjct: 504 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563
Query: 410 ACLGNL-DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
G+L + G LH + G S + N+LI MY+KC + + ++F+ + ++N+I+W
Sbjct: 564 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 623
Query: 469 TSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+++ + E L KM + + + LSA A++ L G+++H A++
Sbjct: 624 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK 683
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEF 586
+G D F+ NA DMY +CG + S R + +WNIL++ G
Sbjct: 684 LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCAT 743
Query: 587 FRKMID 592
F +M++
Sbjct: 744 FHEMLE 749
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 232/466 (49%), Gaps = 29/466 (6%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H++ K + LSV N ++M+ KFG + A ++F M R+ SWN ++ G +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADV 232
G + E + +++M + G+KP + ++ CG + R G +VH V + G +DV
Sbjct: 151 VGLYLEGMEFFRKMCDL-GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V A++ +Y G + +R VF+ MP R+ +SW +++ GY + GE E
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE-----------PEE 258
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
++D + DE LGR++ G V+K G ++V N LI M S GN +
Sbjct: 259 VID--------------IYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+F +M +D +SW ++ + Y + +++ + +M + T++++LS +
Sbjct: 305 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G +H L ++ G S + + NTL+ MY+ +A VF Q+P K++ISW S++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
+ RS +AL M+ + K N VT S L+AC G+ +H + G+
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF 484
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGYAE 576
++ + NAL+ MY + G M + RDV AWN L+ GYAE
Sbjct: 485 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 530
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 15/458 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYL 117
NS NG +E++ + M+ + V+ + L+ + +W RG +
Sbjct: 320 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG------I 373
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H +V K V + N L M+ G A VF +M +DL SWN L+ + G
Sbjct: 374 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 433
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL L M G + TF L C ++G+ +H V+ G + + NA
Sbjct: 434 LDALGLLCSMI-SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 492
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L++MY K G++ +R V MP+RD ++WNA+I GY E+ + K L F MR V +
Sbjct: 493 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552
Query: 298 FMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++T+ SV+SA L GD + G+ +H Y++ GF D V N LI MY G+ + +F
Sbjct: 553 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 612
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++++++++W M++ ++ ++ M + G D+ + + LSA A L L+
Sbjct: 613 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 672
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +LH LA++ G I N DMYSKC I + +++ ++++ SW +I L
Sbjct: 673 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 732
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+ E F +M+ + +KP VT VS+L+AC+ G
Sbjct: 733 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 770
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 209/418 (50%), Gaps = 4/418 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G AL L SM V+ + + C +++G LH +V
Sbjct: 421 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 480
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +GNA +SM+ K G++ + V +M RD+ +WN LIGGYA+ D+AL+
Sbjct: 481 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 540
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMY 242
+Q M V GV + T VL C DL +RGK +H +++ G+E+D V N+LITMY
Sbjct: 541 FQTMR-VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 599
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCGDL ++ +F+G+ R+ I+WNAM++ +G + L L MR V D + S
Sbjct: 600 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 659
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+SA+ + + G+++HG +K+GF D + N MY G E K+ ++
Sbjct: 660 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 719
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+ SW +IS ++ T+ M G P +T S+L+AC+ G +D G+ +
Sbjct: 720 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 779
Query: 423 QLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ R GL I +ID+ + + +A ++P K N + W S++ +++
Sbjct: 780 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 837
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 178/383 (46%), Gaps = 32/383 (8%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ VH ++ V N LI MY K G + AR +FD MP R+ +SWN M+SG
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVS 334
G Y++G+ F M ++ + P ++S+++A G + G +VHG+V K G DV
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V ++ +Y +G KVF M ++VVSWT+++ Y P++ ++ Y+
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK------ 264
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
DE LG ++ +++GL S + + N+LI M +D A
Sbjct: 265 ---DE----------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
+F Q+ +++ ISW SI N E+ F M + + NS T+ ++LS +
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365
Query: 514 ALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
G+ IH +++G FD + N LL MY GR A F +D+ +WN L
Sbjct: 366 HQKWGRGIHGLVVKMG--FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+ + G+ A MI S
Sbjct: 424 MASFVNDGRSLDALGLLCSMISS 446
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 215/405 (53%), Gaps = 6/405 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G +P+ F +L C P D R E+ V+ G++ADV V ALI+ +CGDL
Sbjct: 5 GCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDL 64
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR FD +P ++ +SWN+MI+ E+G + + L ++ M V P ++ + +
Sbjct: 65 EGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSC 124
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D + G+ +H V GF V V N L+ MY + + F R++SKDVVSW
Sbjct: 125 SGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWN 184
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+MI+ + D+A+ETY+ M E + P +IT+ L A L + L + A+R
Sbjct: 185 SMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIR 244
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL +++ + L+ KC C+D+A VF ++ +NV+SW+ +I L + R +A+
Sbjct: 245 LGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIEL 304
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F +M L+ ++PN VTL+S+L ACA GA+ G+ HA G + + NAL++MY +
Sbjct: 305 FHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGK 364
Query: 547 CGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG + A F++ R+V +W +L GYA G A F+ M
Sbjct: 365 CGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAM 409
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 232/454 (51%), Gaps = 20/454 (4%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + A +S + GDL A F ++ +++ SWN +I + G F AL +Y+RM
Sbjct: 48 VTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRM-E 106
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GVKP ++ L +C G+ DL++GK +H V G++ V V NAL+ MY KC L
Sbjct: 107 PEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLD 166
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR F+ + +D +SWN+MI+ + + G + L + M+ E ++P +TL + A+
Sbjct: 167 LAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAA 226
Query: 309 ---ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
GD KL +E I++G D+ V + L+ G ++ VF RME ++VV
Sbjct: 227 LSLRSAGDTKLLQE---DAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVV 283
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW+ +I+ A+E + M+ +G P+E+T+ SVL ACA G + G + H
Sbjct: 284 SWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARV 343
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
G + +AN L++MY KC + A VF + +NV+SWT+++ G + + EA
Sbjct: 344 SGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEAR 403
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NA 539
F+ M L ++PN +T VS+L C+ G + G E I V G +P
Sbjct: 404 RVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLE----QFHIMVGDFGIVPVTEHYGC 459
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++D+ R G ++ A + E D +AWN LL
Sbjct: 460 VIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLL 493
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 204/423 (48%), Gaps = 2/423 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L +G +AL+ M+ + + + ++ + C R ++G +H V+
Sbjct: 83 NSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVAT 142
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +GNA ++M+ K L A F ++ +D+ SWN +I +++ G DEAL
Sbjct: 143 DGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALET 202
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+RM ++P T L + K + IR G E D+ V +AL++
Sbjct: 203 YRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALG 262
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L +AR VFD M +R+ +SW+ +I+ E+G + LF M + P+ +TL S
Sbjct: 263 KCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLS 322
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A G GR H V GF + +V N L+ MY G+ VF M ++
Sbjct: 323 VLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRN 382
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLH 422
VVSWT M++ Y ++A ++ M EG P+ IT SVL C+ G + G+ + H
Sbjct: 383 VVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFH 442
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+ G++ +ID+ + +++A E+ +P + + +W S++ ++++ +
Sbjct: 443 IMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHT 502
Query: 482 FEA 484
A
Sbjct: 503 DRA 505
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---TGLISYIIIANTLIDMYSK 446
ME +G P+ + +L ACA +L ++ R TG + + +A LI ++
Sbjct: 1 MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
C ++ A E F +IP KNV+SW S+I L + AL +R+M +KP+ ++ +
Sbjct: 61 CGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA 120
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
L +C+ + L GK IH G F+ NAL++MY +C R+ A F + +DV
Sbjct: 121 LCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDV 180
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
+WN ++ +++ G A E +R+MI
Sbjct: 181 VSWNSMIAAHSQLGGSDEALETYRRMI 207
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 244/457 (53%), Gaps = 56/457 (12%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
L+++L A+ + G+ A Y+F + ++++ +NV+I Y + EALS++Q M
Sbjct: 73 LAIKLMRAYSAQ----GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVM 128
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
PD YTFPCVL+ C G+ +L+ G +VH +++ G + ++ + NAL+ MY KCG
Sbjct: 129 LSCA-FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L AR V D MP RD +SWN+M++GY ++G++ L + M + ++ D T++S+
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL--- 244
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+P++ Y S N + +F RM K+++SW
Sbjct: 245 -----------------------------SPVV-CYTSLENVQYIHNMFERMTKKNLISW 274
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MI+ Y + +P++AV + ME G PD +TIAS+L AC L L LG +LH+ +
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L +++ N L+DMY+KC C+++A +VF ++ ++V+SWTS++ + + ++A+
Sbjct: 335 GNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
F KM+ P+S+ VS+LSAC+ G L G+ H R+ G +P ++
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR----HYFRMMTEQYGIVPRIEHFACMV 450
Query: 542 DMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTG 573
D++ R G ++ A++ NER W LL+
Sbjct: 451 DLFGRAGEVEEAYSFIKQMPMEPNER---VWGALLSA 484
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 36/389 (9%)
Query: 211 PDLKRGKEVHVH-VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
P +K ++H VI D + L+ Y G+ AR +FD +++ + +N M
Sbjct: 49 PGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVM 108
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I Y N Y++ L +F +M +PD T V+ A + + ++G +VH ++K+G
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ + N L+ MY G E KV +M +DVVSW +M++ Y S D A+E +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M++ D T+AS LS C +L+ +H +
Sbjct: 229 MDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNM------------------------- 262
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
F ++ KN+ISW +I N+ EA+ F +M +KP++VT+ S+L A
Sbjct: 263 -------FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAW 567
C + AL G+ +H + + + + L NALLDMY +CG ++ A + F+ RDV +W
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW 375
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSKGN 596
+++ Y GQG A F KM+DS N
Sbjct: 376 TSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 40/371 (10%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H + K ++ +GNA ++M+ K G L A V +M RD+ SWN ++ GYA+
Sbjct: 156 GLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQ 215
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G FD+AL + + M + ++A
Sbjct: 216 SGQFDDALEICKEM----------------------------------DSLNLNHDAGTM 241
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + Y ++ +F+ M K++ ISWN MI+ Y N + + LF+ M E
Sbjct: 242 ASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG 301
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T++S++ A + LGR +H Y+ K ++ + N L+ MY G EE
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEAR 361
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF +M +DVVSWT+M+S Y S AV + M G PD I SVLSAC+ G
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 414 NLDLGIKLHQLAMRT---GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
LD G H M T G++ I ++D++ + +++A Q+P + N W
Sbjct: 422 LLDQG--RHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWG 479
Query: 470 SIILGLRLNNR 480
+++ R++++
Sbjct: 480 ALLSACRVHSK 490
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 5/203 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A+ M+E + D + +L+ C G LH + K ++ L
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLL 343
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ K G L A VF KM RD+ SW ++ Y ++G +A++L+ +M G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKML-DSG 402
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD F VL C L +G+ + ++G ++ ++ ++ + G++ A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 252 RLVFDGMP--KRDRISWNAMISG 272
MP +R+ W A++S
Sbjct: 463 YSFIKQMPMEPNERV-WGALLSA 484
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 244/513 (47%), Gaps = 39/513 (7%)
Query: 116 YLHSVVSKTMSH----LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+L S + + SH S L N + G L A +F M RD SWN +I Y
Sbjct: 69 HLASSTAPSTSHSFTATSTFLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAY 128
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
++ EA+SL+ M G V+P T VL C DL +++H H+ + ++++
Sbjct: 129 SRGEEPTEAISLFSAMNSCG-VRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSN 187
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V + AL+ +Y KC L AR FDG+PK + ISWN +I Y G + +F M
Sbjct: 188 VILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDMAIDMFFRMVW 247
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL------- 344
V P T+S + A G + GR +H +V++ G+ V V + ++ MY
Sbjct: 248 AGVSPLVYTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDL 307
Query: 345 ------------------------SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
S G + ++VF ME ++VSW M++ Y S+
Sbjct: 308 AQRLFDLAPVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDL 367
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A++ +Q M E D +T+ VL+AC L +L G ++H A ++G I Y + N L
Sbjct: 368 TSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNAL 427
Query: 441 IDMYSKCKCIDKA--LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+ MYSKC C+ A L +F +++ SW S+I G ++ S AL+ +M PN
Sbjct: 428 LRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEATPN 487
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T S L+ACA I L GK+IHA+ +R G D L +AL+DMY +C + F
Sbjct: 488 QSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFE 547
Query: 559 SN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +DV WN ++ G A G+G E F +M
Sbjct: 548 AGPSQDVILWNSMIFGCAYNGKGEYGLELFFEM 580
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 226/476 (47%), Gaps = 36/476 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ +M + + L +++ C LH ++K +V LG A +
Sbjct: 136 EAISLFSAMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALV 195
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K L A F + + SWNV+I Y AG D A+ ++ RM W GV P V
Sbjct: 196 DVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDMAIDMFFRMVW-AGVSPLV 254
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG--DLVR----- 250
YT L C L+ G+ +H V+R GYE V V ++++ MY KCG DL +
Sbjct: 255 YTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDL 314
Query: 251 ------------------------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
A+ VF+GM + + +SWNAM++GY + + L LF
Sbjct: 315 APVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLF 374
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR+ + D +TL V++A + D G EVH + K GF + N L++MY
Sbjct: 375 QQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKC 434
Query: 347 GNREEGEK--VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E+ +F +D SW ++IS YE + + A+ M E + P++ T +S
Sbjct: 435 GCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEAT-PNQSTFSS 493
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L+ACA + L+ G ++H +R G + I+ + LIDMYSKC+ D ++ +F P ++
Sbjct: 494 ALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQD 553
Query: 465 VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
VI W S+I G N + L +FF + P+SVT + L +C G + G+
Sbjct: 554 VILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGHVGLGR 609
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 131/315 (41%), Gaps = 37/315 (11%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L AL+ M++ +D L ++ C +G +H+ K+ L NA
Sbjct: 367 LTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNA 426
Query: 136 FLSMFVKFGDLGHA--WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
L M+ K G L A +F +RD +SWN LI GY + + AL M +
Sbjct: 427 LLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEA-- 484
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF L C + L GK++H ++IR GY D + +ALI MY KC +
Sbjct: 485 TPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMR 544
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ P +D I WN+MI G NG+ GL LF M + + PD +T + + G
Sbjct: 545 IFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGH 604
Query: 314 EKLGREV--------------------------HGYVIKMGFSDDVSVCNPLIKMYL--- 344
LGR HGY++++ P M+L
Sbjct: 605 VGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDFIGHMPFEPTTAMWLRIF 664
Query: 345 ----SFGNREEGEKV 355
+GNR+ GE+
Sbjct: 665 DCCREYGNRKLGERA 679
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
N ++ + C + A ++F +P ++ SW +II EA+ F M ++
Sbjct: 91 NRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSCGVR 150
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P VTL S+L CA L +++H H + + L AL+D+Y +C + A
Sbjct: 151 PKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRA 210
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ D+S WN+++ Y G G +A + F +M+
Sbjct: 211 FDGIPKPNDIS-WNVIIRRYLLAGMGDMAIDMFFRMV 246
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 247/462 (53%), Gaps = 29/462 (6%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H +V + + +++FG + A+ VF +M +RD+ +WN ++ G + +A++L+ R
Sbjct: 99 HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGR 158
Query: 187 MFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M VG GV D T VL C + D +HV+ ++ G ++ V NALI +Y K
Sbjct: 159 M--VGEGVAGDAVTLSSVLPMCVLLGDRALALVMHVYAVKRGLSGELFVCNALIDVYGKL 216
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G LV AR VF GM RD ++WN++IS Y + G+ + LF M + V PD +TL S+
Sbjct: 217 GMLVEARWVFGGMALRDLVTWNSIISAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLA 276
Query: 306 SASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
SA GDE+ + VH YV + G+ D+ N ++ MY + + VF + +DV
Sbjct: 277 SAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDV 336
Query: 365 VSWTTMISCYEGSVLPDKAVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW T+I+ Y + L ++AV Y M EG P + T S+L A + LG L G+++H
Sbjct: 337 VSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHA 396
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L+++TGL + ++ LID+Y+KC + +A+ +F +P ++ W +II GL ++ +
Sbjct: 397 LSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD------GFL 536
AL F +M +KP++VT VS+L+AC+ G + G+ FD G +
Sbjct: 457 ALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLVDQGRSF----------FDLMQTVYGIV 506
Query: 537 PNA-----LLDMYVRCGRMKPAWN--QFNSNERDVSAWNILL 571
P A ++DM R G++ A+ Q + D + W LL
Sbjct: 507 PIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGALL 548
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 208/403 (51%), Gaps = 8/403 (1%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRA 251
++PD +TFP ++R P + H +R G +V +L+ Y++ G + A
Sbjct: 65 LRPDSFTFPPLVRAA---PGPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD MP+RD +WNAM+SG N + + LF M V D +TLSSV+ L+
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLL 181
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD L +H Y +K G S ++ VCN LI +Y G E VF M +D+V+W ++I
Sbjct: 182 GDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSII 241
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL- 430
S YE AVE + M G PD +T+ S+ SA A G+ +H R G
Sbjct: 242 SAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWD 301
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ II N ++DMY+K ID A VF +PD++V+SW ++I G N S EA+ +
Sbjct: 302 VGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYND 361
Query: 491 MMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M + LKP T VSIL A + +GAL G +HA +++ G+ D ++ L+D+Y +CG
Sbjct: 362 MQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCG 421
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F + R WN ++ G G GA A F +M
Sbjct: 422 KLVEAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQM 464
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 197/429 (45%), Gaps = 7/429 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ LC N A+ M + D L +++ +C L +H K
Sbjct: 137 NAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLGDRALALVMHVYAVK 196
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA + ++ K G L A +VFG M RDL +WN +I Y + G A+ L
Sbjct: 197 RGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAYEQGGKVAAAVEL 256
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMY 242
+ M GV PDV T + D + K VH +V R G++ D+ NA++ MY
Sbjct: 257 FHGMM-KSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGNAVVDMY 315
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K + A++VFD +P RD +SWN +I+GY +NG + + ++ M + P T
Sbjct: 316 AKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKPIQGTF 375
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A +G + G +H IK G + DV V LI +Y G E +F M
Sbjct: 376 VSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLFEHMPR 435
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ W +I+ KA+ + M+ EG PD +T S+L+AC+ G +D G
Sbjct: 436 RSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLVDQGRSF 495
Query: 422 HQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
L M+T G++ ++DM + +D+A E +P K + W +++ R++
Sbjct: 496 FDL-MQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGALLGACRIH 554
Query: 479 NRSFEALIF 487
A I+
Sbjct: 555 GNVELAAIY 563
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 151/313 (48%), Gaps = 8/313 (2%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEK 354
PD T ++ A+ + H +++G +V L+ YL FG E +
Sbjct: 67 PDSFTFPPLVRAAP---GPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M +DV +W M+S + AV + M EG D +T++SVL C LG+
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLGD 183
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L + +H A++ GL + + N LID+Y K + +A VF + +++++W SII
Sbjct: 184 RALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISA 243
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF- 532
+ A+ F MM + + P+ +TLVS+ SA A+ G K +H + R G
Sbjct: 244 YEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVG 303
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D NA++DMY + ++ A F N +RDV +WN L+TGY + G A + M
Sbjct: 304 DIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQ 363
Query: 592 DSKGNWRKLMGLF 604
+ +G + + G F
Sbjct: 364 NHEG-LKPIQGTF 375
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 235/462 (50%), Gaps = 3/462 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +S +VK +L A +F M R+ SW ++IGGY++ EA +LY M GV
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM-CRSGV 139
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD TF +L LK ++H H+IRFG+ A + V N+L+ Y K L A
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F MP +D +S+N MI+GY + G + L LF+ MR + P T ++++ S D
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSED 259
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+++HG IK + D+ V N L+ Y + + +F M D VS+ +I+
Sbjct: 260 VIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + +K+ + ++ ++ A++LS A NL +G + H A+ T +S
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + N L+DMY+KC+ + A +F + +N + WT+II EAL F++M
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNR 439
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N+ + T S L A A + ++ GK++H+ +R+G+ F + L+DMY CG MK
Sbjct: 440 ENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKD 499
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A F +R++ WN L++ Y++ G F MI+S
Sbjct: 500 AIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIES 541
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 216/402 (53%), Gaps = 2/402 (0%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L +HS + + S+ + N+ + + K L A +F +M +D S+NV+I GY
Sbjct: 161 EVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYT 220
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K GF +EAL L+ +M + +P +TF +L G D+ G+++H I+ Y D+
Sbjct: 221 KYGFREEALKLFMQMRNMD-FQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDI 279
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+ Y K + A+ +FD MP+ D +S+N +I+GY NG+Y K LF ++
Sbjct: 280 FVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGT 339
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D ++++S + + + +GR+ H + +V V N L+ MY E+
Sbjct: 340 SFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDA 399
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F+ + ++ V WT +IS Y ++A++ ++ M E D+ T AS L A A L
Sbjct: 400 NRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANL 459
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++ LG +LH +R GL+S + + L+DMY+ C + A+EVF ++PD+N++ W ++I
Sbjct: 460 ASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALI 519
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N + F M+ + L P+SV+ +S+L+AC+ G
Sbjct: 520 SAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRG 561
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 183/358 (51%), Gaps = 2/358 (0%)
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
VN +++ YVK +L RAR +F+ M R+ +SW MI GY +N + + L+ M V
Sbjct: 80 VNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD +T ++++S + K ++H ++I+ GFS + V N L+ Y + +
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+FS M +KD VS+ MI+ Y ++A++ + M P T A++L +
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSED 259
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G ++H LA++T + I +AN L+D YSK ID A +F ++P+ + +S+ II G
Sbjct: 260 VIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319
Query: 475 LRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N + ++ F+++ + + ++LS A L G++ HA A+ +
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379
Query: 534 GFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ NAL+DMY +C + + A F N R+ W +++ Y ++G A + F++M
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 2/261 (0%)
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ S N ++ Y+ N ++F M S++ VSWT MI Y + P +A Y M
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD IT A++LS L +++H +R G + +I+ N+L+D Y K C+D
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLD 195
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F ++P K+ +S+ +I G EAL F +M ++ +P+ T ++L
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSV 255
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++ G++IH A++ +D F+ NALLD Y + + A N F+ E D ++NI
Sbjct: 256 GSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNI 315
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++TGYA GQ + + F+++
Sbjct: 316 IITGYAWNGQYEKSFDLFKRL 336
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 157/410 (38%), Gaps = 74/410 (18%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ALK M N+ D+ + ++ G LHS V + SV G
Sbjct: 425 GFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSG 484
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + M+ G + A VF +M DR++ WN LI Y++ G + S + M G+
Sbjct: 485 SVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMI-ESGL 543
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD +F VL C RG E + N++ +Y
Sbjct: 544 YPDSVSFLSVLTACS-----HRGL----------VEKALWYFNSMTQVY----------- 577
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
D P+R + MI +G + + L + E+ +PD + SSV+++ + +
Sbjct: 578 KLD--PRRKH--YATMIDVLCRSGRFNEAENL---ISEMPFEPDEVMWSSVLNSCRIHKN 630
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV-----VSWT 368
+ L ++ + KM D + + +Y G E KV M + V SW
Sbjct: 631 QDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWV 690
Query: 369 TM---ISCYEGSVLPDKAVET--------YQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ + + + E ++M+ EG PD ++C L N+D
Sbjct: 691 EIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPD--------TSCT-LQNVDE 741
Query: 418 GIKL-------HQLAMRTGLI-----SYIIIANTL---IDMYSKCKCIDK 452
+K+ +LA+ LI S III L +D ++ K I K
Sbjct: 742 EMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISK 791
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 243/488 (49%), Gaps = 42/488 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 38 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPF 96
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L++C K G+++H HV++ G + D+ V +LI+MYV+ G L A VFD P RD
Sbjct: 97 LLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD 156
Query: 263 RIS-------------------------------WNAMISGYFENGEYMKGLMLFIMMRE 291
+S WNAMISGY E G Y + L LF M +
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR+VH ++ GF ++ + N LI +Y G E
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW T+I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 336
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ I K++ SW
Sbjct: 337 LGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 396
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ R+ + F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 397 AMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD 456
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
++ + + ++D+ G K A N+ E D W LL G L
Sbjct: 457 YKMTPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELG 514
Query: 584 EEFFRKMI 591
E F + +I
Sbjct: 515 ESFAQNLI 522
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 212/416 (50%), Gaps = 38/416 (9%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYV---KCGDLVRARLVFDGMPKRDRISWNAM 269
L+ + +H +I+ G ++ LI + L A VF+ + + + + WN M
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
G+ + + + L L++ M + + P+ T ++ + K G+++HG+V+K+G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKV-------------------------------FSR 358
D+ V LI MY+ G E+ KV F
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ KDVVSW MIS Y + +A+E ++ M PDE T+ +V+SACA G+++LG
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H G S + I N LID+YSKC ++ A +F +P K+VISW ++I G
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM 302
Query: 479 NRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGF 535
N EAL+ F++M+ + + PN VT++SIL ACA +GA+ G+ IH + + GVA
Sbjct: 303 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASS 362
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L +L+DMY +CG ++ A FNS + +S+WN ++ G+A G+ + + F +M
Sbjct: 363 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
ALK M L + + L++ C + + EG +H V K L + + + +S
Sbjct: 75 ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 134
Query: 139 MFVKFGDLGHAWYVFG---------------------------KMCD----RDLFSWNVL 167
M+V+ G L A VF KM D +D+ SWN +
Sbjct: 135 MYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAM 194
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I GYA+ G + EAL L++ M V+PD T V+ C ++ G++VH + G
Sbjct: 195 ISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 253
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+ +++ +VNALI +Y KCG+L A +F+G+P +D ISWN +I GY Y + L+LF
Sbjct: 254 FGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 313
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLS 345
M P+ +T+ S++ A +G +GR +H Y+ K G ++ S+ LI MY
Sbjct: 314 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAK 373
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ E +VF+ + K + SW MI + D + + + M G PD+IT +
Sbjct: 374 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGL 433
Query: 406 LSACACLGNLDLG 418
LSAC+ G LDLG
Sbjct: 434 LSACSHSGMLDLG 446
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 172/380 (45%), Gaps = 39/380 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V +V C + G +HS +
Sbjct: 192 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDD 251
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G+L A +F + +D+ SWN LIGGY + EAL L
Sbjct: 252 HGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLL 311
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G DV T +L C + + G+ +HV++ + G + +LI M
Sbjct: 312 FQEMLRSGETPNDV-TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDM 370
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ + + SWNAMI G+ +G +F MR+ ++PD +T
Sbjct: 371 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITF 430
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + + K+ ++E
Sbjct: 431 VGLLSACSHSGMLDLGRHI-------------------------FRSMTQDYKMTPKLE- 464
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ MI S L +A E ME E PD + S+L AC GN++LG
Sbjct: 465 ----HYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELGESF 517
Query: 422 HQLAMRT---GLISYIIIAN 438
Q ++ SY++++N
Sbjct: 518 AQNLIKIEPENPGSYVLLSN 537
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 36/312 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + LI+ + F VF ++ +++ W TM +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH----------QL 424
S P A++ Y M + G +P+ T +L +CA G ++H L
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 425 AMRTGLISY---------------------IIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ T LIS ++ LI Y+ I+ A ++F +IP K
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW ++I G EAL F+ MM N++P+ T+V+++SACA+ G++ G+++H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G + + NAL+D+Y +CG ++ A F +DV +WN L+ GY
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306
Query: 582 LAEEFFRKMIDS 593
A F++M+ S
Sbjct: 307 EALLLFQEMLRS 318
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 244/513 (47%), Gaps = 39/513 (7%)
Query: 116 YLHSVVSKTMSH----LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+L S + + SH S L N + G L A +F M RD SWN +I Y
Sbjct: 69 HLASSTAPSTSHSFTATSTFLFNRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAY 128
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
++ EA+SL+ M G V+P T VL C DL +++H H+ + ++++
Sbjct: 129 SRGEEPTEAISLFSAMNSCG-VRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSN 187
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V + AL+ +Y KC L AR FDG+PK + ISWN +I Y G + +F M
Sbjct: 188 VILGTALVDVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDLAIDMFFRMVW 247
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL------- 344
V P T+S + A G + GR +H +V++ G+ V V + ++ MY
Sbjct: 248 AGVSPLVYTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDL 307
Query: 345 ------------------------SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
S G + ++VF ME ++VSW M++ Y S+
Sbjct: 308 AQRLFDLAPVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDL 367
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A++ +Q M E D +T+ VL+AC L +L G ++H A ++G I Y + N L
Sbjct: 368 TSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNAL 427
Query: 441 IDMYSKCKCIDKA--LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+ MYSKC C+ A L +F +++ SW S+I G ++ S AL+ +M PN
Sbjct: 428 LRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEATPN 487
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T S L+ACA I L GK+IHA+ +R G D L +AL+DMY +C + F
Sbjct: 488 QSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFE 547
Query: 559 SN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ +DV WN ++ G A G+G E F +M
Sbjct: 548 AGPSQDVILWNSMIFGCAYNGKGEYGLELFFEM 580
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 226/476 (47%), Gaps = 36/476 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ +M + + L +++ C LH ++K +V LG A +
Sbjct: 136 EAISLFSAMNSCGVRPKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALV 195
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K L A F + + SWNV+I Y AG D A+ ++ RM W GV P V
Sbjct: 196 DVYGKCFALSEARRAFDGIPKPNDISWNVIIRRYLLAGMGDLAIDMFFRMVW-AGVSPLV 254
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG--DLVR----- 250
YT L C L+ G+ +H V+R GYE V V ++++ MY KCG DL +
Sbjct: 255 YTVSQALLACRDNGALEEGRRIHTFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDL 314
Query: 251 ------------------------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
A+ VF+GM + + +SWNAM++GY + + L LF
Sbjct: 315 APVKDIVMSTSIVSGLASCGRITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLF 374
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR+ + D +TL V++A + D G EVH + K GF + N L++MY
Sbjct: 375 QQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKC 434
Query: 347 GNREEGEK--VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E+ +F +D SW ++IS YE + + A+ M E + P++ T +S
Sbjct: 435 GCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEAT-PNQSTFSS 493
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L+ACA + L+ G ++H +R G + I+ + LIDMYSKC+ D ++ +F P ++
Sbjct: 494 ALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQD 553
Query: 465 VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
VI W S+I G N + L +FF + P+SVT + L +C G + G+
Sbjct: 554 VILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGHVGLGR 609
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 131/315 (41%), Gaps = 37/315 (11%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L AL+ M++ +D L ++ C +G +H+ K+ L NA
Sbjct: 367 LTSALQLFQQMRQETKELDAVTLGCVLNACTGLLDLGKGEEVHTFAFKSGFIGYPFLKNA 426
Query: 136 FLSMFVKFGDLGHA--WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
L M+ K G L A +F +RD +SWN LI GY + + AL M +
Sbjct: 427 LLRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALLALSEMHYEA-- 484
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ TF L C + L GK++H ++IR GY D + +ALI MY KC +
Sbjct: 485 TPNQSTFSSALAACANIFLLNHGKQIHAYMIRNGYVIDDILQSALIDMYSKCRLFDYSMR 544
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ P +D I WN+MI G NG+ GL LF M + + PD +T + + G
Sbjct: 545 IFEAGPSQDVILWNSMIFGCAYNGKGEYGLELFFEMSKQGITPDSVTFLGALVSCISEGH 604
Query: 314 EKLGREV--------------------------HGYVIKMGFSDDVSVCNPLIKMYL--- 344
LGR HGY++++ P M+L
Sbjct: 605 VGLGRSYFTQMTDEYNIVPRIEHYECMIELLGKHGYMVELEDFIGHMPFEPTTAMWLRIF 664
Query: 345 ----SFGNREEGEKV 355
+GNR+ GE+
Sbjct: 665 DCCREYGNRKLGERA 679
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
N ++ + C + A ++F +P ++ SW +II EA+ F M ++
Sbjct: 91 NRAVESLAACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSCGVR 150
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P VTL S+L CA L +++H H + + L AL+D+Y +C + A
Sbjct: 151 PKDVTLASVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRA 210
Query: 557 FNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ D+S WN+++ Y G G LA + F +M+
Sbjct: 211 FDGIPKPNDIS-WNVIIRRYLLAGMGDLAIDMFFRMV 246
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 250/487 (51%), Gaps = 24/487 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E A N ++ K G+D+ LY+ + AFL ++ K G + A +F
Sbjct: 77 NEKAEANQLQTHFIKWGFDQFLYVST---------------AFLDLYSKLGFVKAAQRLF 121
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++D+ SWN LI GY + G +A L+ M P T ++ +CG
Sbjct: 122 DDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM-RRREFDPCQRTLVSLMPSCGTQQLF 180
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+GK +H ++ G + D V NAL++MY KC DL +L+F + ++ +SWN MI +
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + + +++F M E V+ + +T+ S++SA+ G +H Y K+G ++V
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC------IHCYATKIGLVENV 294
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
SV L+ Y+ G E E ++ K++V+ T +IS Y V Y +++
Sbjct: 295 SVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHL 354
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D + + ++ ++ +G+ H +++GLI ++AN I MYSK ID
Sbjct: 355 DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAV 414
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+F ++ K + SW S+I RS +A+ F +M L+ P+S+TL S+LSAC +
Sbjct: 415 FSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQN 474
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G L G+ +H + LR + +GF+ AL+DMYV+CGRM A N F S E +++WN L+
Sbjct: 475 GNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLI 534
Query: 572 TGYAERG 578
+GY G
Sbjct: 535 SGYGLFG 541
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 241/524 (45%), Gaps = 11/524 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ A K M+ + LV+L+ C ++ + +G +H + K L ++
Sbjct: 143 GNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVK 202
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K DL +FG++ ++ + SWN +IG + + G F EA+ ++++M V
Sbjct: 203 NALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLE-ESV 261
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ T +L +H + + G +V VV +L+ YVKCG + A L
Sbjct: 262 NANSVTMVSILSANANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAEL 315
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
++ K++ ++ A+IS Y E G+ + L+ +++ + + D + + +I
Sbjct: 316 IYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDH 375
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+G HGY +K G D V N I MY F N + +F M K + SW ++IS
Sbjct: 376 IGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISS 435
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ A+ + M G PD IT+AS+LSAC GNL G LH +R L
Sbjct: 436 CAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLE 495
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ L+DMY KC +D A VF + + + SW S+I G L AL+ + +MM
Sbjct: 496 GFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMME 555
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+KPN +T IL+AC G + G++ + G+ + +++ M R G +
Sbjct: 556 KGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFE 615
Query: 552 PA--WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A + Q D + W LL+ + L E +K+ S
Sbjct: 616 EAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFS 659
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 182/413 (44%), Gaps = 13/413 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +A+ M E ++ + +V+++ + G +H +K
Sbjct: 234 NTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSIL-----SANANTGC-IHCYATK 287
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + + + +VK G + A ++ ++L + +I YA+ G + L
Sbjct: 288 IGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRL 347
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y + + +K D +++ + G H + ++ G D V N I+MY
Sbjct: 348 YSIVQHLD-MKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYS 406
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K ++ +F M K+ SWN++IS + G + + LF M PD +TL+S
Sbjct: 407 KFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLAS 466
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA G+ G +H Y+++ + V L+ MY+ G + E VF M+
Sbjct: 467 LLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPC 526
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ SW ++IS Y + A+ Y M +G P++IT + +L+AC G ++ G K +
Sbjct: 527 LASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFK 586
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + G++ +++ M + ++A+ + PD V W +++
Sbjct: 587 IMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAV--WGALL 637
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSA------CARIGALMCGK-------EIHAHALRIGV 530
L+ FR+++ + +KPN T ++ A + C + ++ H ++ G
Sbjct: 35 LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWG- 93
Query: 531 AFDGFL--PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
FD FL A LD+Y + G +K A F+ E+DV +WN L++GY G A + F
Sbjct: 94 -FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152
Query: 588 RKM 590
+M
Sbjct: 153 VEM 155
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 235/438 (53%), Gaps = 16/438 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGF-FDEALSLYQR 186
S+ N LS + D ++ +F + + +++N+++ + L LY +
Sbjct: 48 SIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQ 107
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M + + P+ +TFP V C + +++ + H V + G + D VN+++TMY +CG
Sbjct: 108 MKTLN-ISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCG 166
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVI 305
+ AR VFD + ++D +SWN+++SGY + G + + +F +RE +PD M+L SV+
Sbjct: 167 ENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVL 226
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A +GD +LGR V G+V++ G + + + LI MY G ++F M S+D +
Sbjct: 227 GACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI 286
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W IS Y + + D+A+ + M+ G P+++T+ +VLSACA +G LDLG ++ + A
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
GL I +A LIDMY+KC ++ A VF+ +P KN SW ++I L + ++ EAL
Sbjct: 347 THRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEAL 406
Query: 486 IFFRKMML---NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP----- 537
F +M + +PN +T VS+LSAC G + G + + G +P
Sbjct: 407 SLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRL----FDMMSTLFGLVPKIEHY 462
Query: 538 NALLDMYVRCGRMKPAWN 555
+ ++D+ R G + AW+
Sbjct: 463 SCMVDLLSRAGHLYEAWD 480
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 195/334 (58%), Gaps = 5/334 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++M+ + G+ G A VF ++ ++DL SWN L+ GYAK GF EA+ ++ R+ G
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD + VL CG + DL+ G+ V V+ G + + + +ALI+MY KCG+LV +R
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRR 275
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FDGMP RD I+WNA IS Y +NG + + LF M+E VDP+ +TL++V+SA +G
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG+++ Y G D+ V LI MY G+ E ++VF+ M K+ SW MIS
Sbjct: 336 LDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISA 395
Query: 374 YEGSVLPDKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--G 429
+A+ ++ M EG + P++IT S+LSAC G +D G +L + M T G
Sbjct: 396 LASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDM-MSTLFG 454
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
L+ I + ++D+ S+ + +A +V ++P+K
Sbjct: 455 LVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 204/407 (50%), Gaps = 12/407 (2%)
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++ +L+ C P K +++H +F + + N L++ + D + L+F
Sbjct: 21 IFLLLSLLKQC---PSTKTLQQIHT---QFTIHS-IHKPNHLLSQSISLKDFTYSTLIFS 73
Query: 257 GM-PKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
+ P + ++N M+ +Y L L+ M+ + + P+ T V A + +
Sbjct: 74 HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++ R H V K+G +D N ++ MY G KVF + KD+VSW +++S Y
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193
Query: 375 EGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+AVE + ++ E G PDE+++ SVL AC LG+L+LG + + G+
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + LI MYSKC + + +F +P ++ I+W + I N + EA+ F M
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N + PN VTL ++LSACA IGAL GK++ +A G+ D F+ AL+DMY +CG ++
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
A FN R + ++WN +++ A G+ A F +M D G+ R
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSAR 420
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 158/341 (46%), Gaps = 46/341 (13%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE +LV+++ C + G ++ V + ++ +G+A +SM+ K G+L + +F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RD +WN I YA+ G DEA+SL+ M GV P+ T VL C + L
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMK-ENGVDPNKVTLTAVLSACASIGAL 336
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
GK++ + G + D+ V ALI MY KCG L A+ VF+ MP+++ SWNAMIS
Sbjct: 337 DLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISAL 396
Query: 274 FENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
+G+ + L LF M + P+ +T S++SA VH ++
Sbjct: 397 ASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC-----------VHAGLV------ 439
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMES-----KDVVSWTTMISCYEGSVLPDKAVET 386
+EG ++F M + + ++ M+ + E
Sbjct: 440 ------------------DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA---GHLYEA 478
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+ ++E PD +T+ ++ SAC N+D+G ++ Q+ +
Sbjct: 479 WDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519
>gi|255543567|ref|XP_002512846.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547857|gb|EEF49349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 241/469 (51%), Gaps = 3/469 (0%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M H + N + +VK +L A +F M DR +W +LIGGY + F EA L+
Sbjct: 72 MPHKNTVSVNMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQFSEAFKLF 131
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G KPD TF +L C K +VH HV++ G+ + V + N+L+ Y K
Sbjct: 132 SNMIR-DGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIICNSLVDSYCK 190
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
L A +F M +RD +++NA+I+GY + G + LF M+ + +P T +V
Sbjct: 191 MHRLDLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAV 250
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A + D G+++HGY +KMG +V V N L+ Y + K+FS+M D
Sbjct: 251 LCACIGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELDG 310
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VS+ MI+ Y ++++ ++ ++ A++LS +L +G +LH
Sbjct: 311 VSYNVMITAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSH 370
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A+ TG +++AN+L+DMY+KC + A +F ++ K+ + WT++I E
Sbjct: 371 AIVTGADLEVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEG 430
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L F +M N+ + T S+L A A + ++ GK++H++ +R G + + +AL+DM
Sbjct: 431 LKLFNEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSGSALVDM 490
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
Y +CG +K A F R+V +WN L++ YA+ G G + F +M+
Sbjct: 491 YAKCGSVKEAIRTFKEMPGRNVISWNALISAYAQNGDGEATLKSFEEMV 539
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 2/434 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C +A K +M D L+ C E +H+ V K +V
Sbjct: 119 CQFDQFSEAFKLFSNMIRDGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAV 178
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ + + K L A +F +M +RD ++N LI GY K G ++A+ L+ +M +
Sbjct: 179 IICNSLVDSYCKMHRLDLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNL 238
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G +P +TF VL C G+ D+ G+++H + ++ G +V V N+L+ Y K +
Sbjct: 239 G-FEPSDFTFQAVLCACIGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVND 297
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F MP+ D +S+N MI+ Y G+Y + + LF ++ + ++++S +
Sbjct: 298 AWKLFSKMPELDGVSYNVMITAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGN 357
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D ++G+++H + I G +V V N L+ MY G E E++F ++ SK V WT +
Sbjct: 358 TLDLQMGQQLHSHAIVTGADLEVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTAL 417
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS L ++ ++ + M D+ T ASVL A A L ++ LG +LH +R+G
Sbjct: 418 ISANVQKGLLEEGLKLFNEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGF 477
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + L+DMY+KC + +A+ F ++P +NVISW ++I N L F +
Sbjct: 478 WSNVYSGSALVDMYAKCGSVKEAIRTFKEMPGRNVISWNALISAYAQNGDGEATLKSFEE 537
Query: 491 MMLN-LKPNSVTLV 503
M+L+ +P+S+ +
Sbjct: 538 MVLSGYQPDSLAAI 551
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 142/267 (53%), Gaps = 3/267 (1%)
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
+M + VSV N +I Y+ N ++F M + V+WT +I Y +A +
Sbjct: 71 QMPHKNTVSV-NMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQFSEAFK 129
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M +G PD +T A++LS C ++H ++ G S +II N+L+D Y
Sbjct: 130 LFSNMIRDGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIICNSLVDSYC 189
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
K +D A +F ++ +++ +++ ++I G + +A+ F +M L +P+ T +
Sbjct: 190 KMHRLDLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQA 249
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+L AC + ++ G++IH +A+++G+ ++ F+ N+LLD Y + + AW F+ E D
Sbjct: 250 VLCACIGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELD 309
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKM 590
++N+++T Y+ GQ + + FR++
Sbjct: 310 GVSYNVMITAYSWIGQYRESIDLFREL 336
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 261/520 (50%), Gaps = 12/520 (2%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
D LV L+ C K + LHS K L + ++ ++ L HA +F +
Sbjct: 5 DLLVKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEE 61
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF--WVGGVKPDVYTFPCVLRTCGGVPDL 213
+ ++ WN L+ Y G + E LSL+ +M V +PD YT L++C G+ L
Sbjct: 62 TPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKL 121
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ GK +H ++ ++D+ V +ALI +Y KCG + A VF PK D + W ++I+GY
Sbjct: 122 ELGKMIH-GFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGY 180
Query: 274 FENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+NG L F M + V PD +TL S SA + D LGR VHG+V + GF
Sbjct: 181 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK 240
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + N ++ +Y G+ +F M KD++SW++M++CY + A+ + M
Sbjct: 241 LCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMID 300
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+ + +T+ S L ACA NL+ G ++H+LA+ G I ++ L+DMY KC +
Sbjct: 301 KRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPEN 360
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A+E+F+++P K+V+SW + G + ++L F M+ N +P+++ LV IL+A +
Sbjct: 361 AIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSE 420
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+G + +HA + G + F+ +L+++Y +C + A F DV W+ +
Sbjct: 421 LGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSI 480
Query: 571 LTGYAERGQGALAEEFFRKM---IDSKGNWRKLMGLFRKC 607
+ Y GQG A + +M D K N + + C
Sbjct: 481 IAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSAC 520
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 236/465 (50%), Gaps = 12/465 (2%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C + + G +H + K + + +G+A + ++ K G + A VF + D+
Sbjct: 112 LKSCSGLQKLELGKMIHGFLKKKIDS-DMFVGSALIELYSKCGQMNDAVKVFTEYPKPDV 170
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
W +I GY + G + AL+ + RM + V PD T C + D G+ VH
Sbjct: 171 VLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHG 230
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V R G++ + + N+++ +Y K G + A +F MP +D ISW++M++ Y +NG
Sbjct: 231 FVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETN 290
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L LF M + ++ + +T+ S + A + + G+++H + GF D++V L+
Sbjct: 291 ALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMD 350
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MYL + E ++F+RM KDVVSW + S Y + K++ + M + G+ PD I
Sbjct: 351 MYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIA 410
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ +L+A + LG + + LH ++G + I +LI++Y+KC ID A +VF +
Sbjct: 411 LVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLR 470
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGK 519
+V++W+SII + + EAL +M ++KPN VT VSILSAC+ G + G
Sbjct: 471 HTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGI 530
Query: 520 EIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS 559
++ + V +PN ++D+ R G + A + N+
Sbjct: 531 KM----FHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINN 571
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ AL + M + I ++ +++ +R C +EG +H + L + +
Sbjct: 285 NGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITV 344
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M++K +A +F +M +D+ SW VL GYA+ G ++L ++ M G
Sbjct: 345 STALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNML-SNG 403
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD +L + +++ +H V + G++ + + +LI +Y KC + A
Sbjct: 404 TRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNAN 463
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLML-FIMMREVLVDPDFMTLSSVISASELV 311
VF G+ D ++W+++I+ Y +G+ + L L M V P+ +T S++SA
Sbjct: 464 KVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHA 523
Query: 312 G 312
G
Sbjct: 524 G 524
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 246/457 (53%), Gaps = 27/457 (5%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG-GV 210
+F M +++ SWN L G Y K G DEAL ++ RM GV+P +F V G G
Sbjct: 164 LFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARML-EDGVRPTPVSFVNVFPAAGSGD 222
Query: 211 PD---------LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
P +K G E Y D+ VV++ I M+ + D+ AR+VFD K+
Sbjct: 223 PSWPFLLYGLLIKHGVE---------YVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKK 273
Query: 262 DRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+ WN MI+GY +NG++ + + LFI ++ V D +T S ++A+ D +LG+++
Sbjct: 274 NIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQL 333
Query: 321 HGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
HGY++K M + V + N L+ MY GN + ++F R+ KD+VSW TMI+ + +
Sbjct: 334 HGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDF 393
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+ + M+ G +PD +T+ +VLSA + G+L +G + H +R G I + +
Sbjct: 394 DLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHG-IEGEGLESY 452
Query: 440 LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LIDMYSK ID A VF D++ ++W ++I G + + +A++ FR M+ ++P
Sbjct: 453 LIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEP 512
Query: 498 NSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
SVTL S+L AC +G +C GK+IH+ ALR + + F+ AL+DMY +CG + A N
Sbjct: 513 TSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENV 572
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
F E+ + +++G + G G A F M D
Sbjct: 573 FGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRD 609
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 251/464 (54%), Gaps = 10/464 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ MF + D+ A VF + +++ WN +I GY + G F +A+ L+ ++ V D
Sbjct: 251 IGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSD 310
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF + D++ G+++H ++++ G + + V+ NAL+ MY +CG++ A +
Sbjct: 311 VVTFLSAVTAASQSQDVRLGQQLHGYLMK-GMHSTLPVILGNALVVMYSRCGNVQTAFEL 369
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D +SWN MI+ + +N ++GL+L M++ PD +TL++V+SA+ GD
Sbjct: 370 FDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDL 429
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISC 373
++G++ HGY+I+ G + + + LI MY G + ++VF +D V+W MI+
Sbjct: 430 QIGKQSHGYLIRHGIEGE-GLESYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAG 488
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLIS 432
Y S P++AV ++ M G P +T+ASVL AC + G + G ++H A+R L +
Sbjct: 489 YTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDT 548
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + L+DMYSKC I A VF + +K+ +++T++I GL + AL F M
Sbjct: 549 NVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMR 608
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
LKP++VT ++ +SAC G + G ++ G+A ++D+ + GR+
Sbjct: 609 DKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATPQHHCCIVDLLAKAGRVD 668
Query: 552 PAWNQFNSNERD---VSAWNILLTGYAERGQGALAEEFFRKMID 592
A++ S D ++ W LL +G+ LA K+++
Sbjct: 669 EAYDFVESLGEDGNFIAIWGSLLASCKAQGKMELAAWATEKVLN 712
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 229/446 (51%), Gaps = 20/446 (4%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVH 222
NVL+ Y D AL LY + P D YT+ C L C L+ G+ VH H
Sbjct: 66 NVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAH 125
Query: 223 VIRFGYE-ADVDVV-NALITMYVKC-----GDLVRARLVFDGMPKRDRISWNAMISGYFE 275
++R D V+ N+L+ +Y C G + R +FD MPK++ +SWN + Y +
Sbjct: 126 LLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVK 185
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDV 333
G + L +F M E V P ++ +V A+ GD ++G +IK G + +D+
Sbjct: 186 TGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAG-SGDPSWPFLLYGLLIKHGVEYVNDL 244
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + I M+ + + VF R K++ W TMI+ Y + +A++ + +
Sbjct: 245 FVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGS 304
Query: 394 GSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY--IIIANTLIDMYSKCKCI 450
+P D +T S ++A + ++ LG +LH M+ G+ S +I+ N L+ MYS+C +
Sbjct: 305 KEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMK-GMHSTLPVILGNALVVMYSRCGNV 363
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A E+F ++P+K+++SW ++I N+ E L+ +M + P++VTL ++LSA
Sbjct: 364 QTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAA 423
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAW 567
+ G L GK+ H + +R G+ +G L + L+DMY + GR+ A F+ N+RD W
Sbjct: 424 SNTGDLQIGKQSHGYLIRHGIEGEG-LESYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTW 482
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY + GQ A FR MI++
Sbjct: 483 NAMIAGYTQSGQPEQAVLQFRAMIEA 508
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 208/415 (50%), Gaps = 8/415 (1%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + NG QA+ ++ + + D ++ V + G LH +
Sbjct: 279 NTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLM 338
Query: 123 KTM-SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K M S L V LGNA + M+ + G++ A+ +F ++ ++D+ SWN +I + + F E L
Sbjct: 339 KGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGL 398
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L +M G PD T VL DL+ GK+ H ++IR G E + + + LI M
Sbjct: 399 LLVYQM-QKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLIDM 456
Query: 242 YVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y K G + A+ VFDG RD ++WNAMI+GY ++G+ + ++ F M E V+P +T
Sbjct: 457 YSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVT 516
Query: 301 LSSVISASELVGDEK-LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
L+SV+ A + VG G+++H + ++ +V V L+ MY G E VF M
Sbjct: 517 LASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGM 576
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K V++TTMIS ++A+ + M +G PD +T + +SAC G +D G+
Sbjct: 577 TEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGL 636
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVIS-WTSII 472
L++ GL + ++D+ +K +D+A + + D N I+ W S++
Sbjct: 637 SLYRSMETFGLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLL 691
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 173/368 (47%), Gaps = 19/368 (5%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRAR-LVFDGMPKRD-RISWNAMISGYFENGEYMKGLM 284
G + + A + K G L AR L+ D +P+ + N ++ Y L
Sbjct: 24 GGKGRTQLAVAQVKKLCKQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALR 83
Query: 285 LFIMMREVLVDP---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFS--DDVSVCNPL 339
L+ ++ D T S ++A +LGR VH ++++ S D + N L
Sbjct: 84 LYALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSL 143
Query: 340 IKMYLSFGNREEG-----EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+ +Y S G ++F M K+VVSW T+ Y + PD+A+E + M +G
Sbjct: 144 LNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDG 203
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL--ISYIIIANTLIDMYSKCKCIDK 452
P ++ +V A G+ L+ L ++ G+ ++ + + ++ I M+S+ +
Sbjct: 204 VRPTPVSFVNVFPAAGS-GDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQS 262
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACA 510
A VF + KN+ W ++I G N + +A+ F +++ + + VT +S ++A +
Sbjct: 263 ARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAAS 322
Query: 511 RIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + G+++H + ++ + L NAL+ MY RCG ++ A+ F+ E+D+ +WN
Sbjct: 323 QSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWN 382
Query: 569 ILLTGYAE 576
++T + +
Sbjct: 383 TMITAFVQ 390
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 15/239 (6%)
Query: 370 MISCYEGSVLPDKAVETYQMM-EAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLAM 426
++ Y LPD A+ Y ++ A P D T + L+ACA L LG +H +
Sbjct: 68 LLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAHLL 127
Query: 427 RTG--LISYIIIANTLIDMYSKCK-----CIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
R L ++ N+L+++Y+ C +D +F +P KNV+SW ++
Sbjct: 128 RRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTG 187
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFL 536
R EAL F +M+ + ++P V+ V++ A A G ++ ++ GV + D F+
Sbjct: 188 RPDEALEMFARMLEDGVRPTPVSFVNVFPA-AGSGDPSWPFLLYGLLIKHGVEYVNDLFV 246
Query: 537 PNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++ + M+ ++ A F+ + ++++ WN ++TGY + GQ + A + F +++ SK
Sbjct: 247 VSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSK 305
>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
Length = 763
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 263/532 (49%), Gaps = 17/532 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVD-EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG +AL+ M + D L LV R + G+ +HS S+T SV
Sbjct: 111 NGRGGEALELFSRMADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQ-SRTSGCDSVP 169
Query: 132 -LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N + M+ K G L A VF RD +W ++ GYA+ G + AL L+ M
Sbjct: 170 FVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQ 229
Query: 191 GGV-KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G + + YT +LR C L+RG +H +I + D + N L+ MY KCGDL
Sbjct: 230 GCMYNREAYTS--LLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLH 287
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISA 307
RAR F + +R+ +SW M++ Y ++G+ +GL LF M D D TLS V+SA
Sbjct: 288 RARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSA 347
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G G+ +H ++ G+ D+ + N L+ MY EE +VF ++ K VSW
Sbjct: 348 CSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSW 407
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN----LDLGIKLHQ 423
T++IS Y D++++ + M +G PDE+T++++ +AC L + L +G +H
Sbjct: 408 TSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHT 467
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
G ++ L+ MY++C C+ +A VF+++ K+V+SW +++ + E
Sbjct: 468 RIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEE 527
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
AL ++M + P++ T +++AC+ + + +H G+ AL+
Sbjct: 528 ALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVC 587
Query: 543 MYVRCGRMKPAWNQFNSNERD----VSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CGR+ A F +R V+AWN +L A+ G GA A EFFR M
Sbjct: 588 MYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVM 639
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 237/468 (50%), Gaps = 21/468 (4%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ ++M+ K G L A F K+ RD SW LI Y + G EAL L+ RM G +
Sbjct: 71 NSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCL 130
Query: 194 KPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD T+ L C + L+RG +VH G ++ V N LI MY KCG L+ A+
Sbjct: 131 -PDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAK 189
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE--VLVDPDFMT--LSSVISAS 308
VFD RD ++W AM+ GY ENGE + L LF M + + + + T L IS
Sbjct: 190 KVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGR 249
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
L + G +H +I + D ++ N L++MY G+ K F +E ++ VSWT
Sbjct: 250 AL----ERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWT 305
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLAM 426
M++ Y ++ + + M+ EG+ D T++ VLSAC+ LG G +H +
Sbjct: 306 VMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLV 365
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G I + N L+ MY+KC C+++A VF I DK+ +SWTSII + R E+L
Sbjct: 366 ACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLK 425
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAHALRIGVAFDGFLPNALL 541
F M L+ ++P+ +TL ++ +AC ++ L G+ +H G + + AL+
Sbjct: 426 MFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALV 485
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
MY RCG + A FN +DV +WN +LT E G+ AEE R
Sbjct: 486 CMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGE---AEEALR 530
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 256/547 (46%), Gaps = 43/547 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M++ + +A +L+R C R + G +H+ + +
Sbjct: 213 NGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTAI 272
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN + M+ K GDL A F + R+ SW V++ Y G ++ L L+ M G
Sbjct: 273 GNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGA 332
Query: 193 -VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
D +T CVL C + G+ +H ++ GYE D+ + NAL+TMY KC L A
Sbjct: 333 QADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEA 392
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD + + R+SW ++IS Y ++ + L +F+ M + PD MTLS++ +A +
Sbjct: 393 RRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQL 452
Query: 312 GDE----KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D +GR VH + G + V L+ MY G E VF+++ KDVVSW
Sbjct: 453 EDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSW 512
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
M++ + ++A+ +Q M AEG MPD T A V++AC+ L + +H
Sbjct: 513 NAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAA 572
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI---SWTSIILGLRLNNRSFEA 484
GL + + L+ MY+KC +D A VF ++ +V+ +W SI+ L + A
Sbjct: 573 RGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATA 632
Query: 485 LIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FFR M M ++P+ +T+ +L AC+ G L G D FL + L D
Sbjct: 633 VEFFRVMTMAYVQPDGITITVMLHACSHSGLLATG-------------LDYFL-SMLHDF 678
Query: 544 YVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN--WRKLM 601
+ PA + A I L G A G GA AEE R M + N W+ L+
Sbjct: 679 -----GLAPAAEHY--------ACLIDLLGRA--GVGAEAEEVIRGMPFAPDNVAWKTLL 723
Query: 602 GLFRKCQ 608
CQ
Sbjct: 724 A---SCQ 727
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 5/365 (1%)
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D +N+L+ MY KCG LV AR F+ + +RD +SW +I Y ENG + L LF M
Sbjct: 66 DSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMA 125
Query: 291 EVLVDPDFMT-LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ PD T L+++++ + L+ + G +VH G V N LI MY G+
Sbjct: 126 DEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSL 185
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ +KVF +++D V+WT M+ Y + ++A+ + ME +G M + S+L C
Sbjct: 186 LDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLREC 245
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L+ G ++H + I N L+ MY+KC + +A + F+ I +N +SWT
Sbjct: 246 ISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWT 305
Query: 470 SIILGLRLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
++ + + + L F M L ++ TL +LSAC+ +GA G+ IHA +
Sbjct: 306 VMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLV 365
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEE 585
G D L NAL+ MY +C ++ A F N ++ +W +++ Y + +G + +
Sbjct: 366 ACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLK 425
Query: 586 FFRKM 590
F M
Sbjct: 426 MFLAM 430
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFLPNALLDMYVRCGRMKPAWNQFN 558
T++ + S C G+L+ + + +R V D + N+L++MY +CG + A +F
Sbjct: 35 TVIDVFSRC---GSLVNARNVFDRMVRRDVVSWNDSYALNSLVNMYAKCGSLVEARAEFE 91
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RD +W L+ Y E G+G A E F +M D
Sbjct: 92 KLQRRDAVSWTTLILAYTENGRGGEALELFSRMAD 126
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 250/487 (51%), Gaps = 24/487 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E A N ++ K G+D+ LY+ + AFL ++ K G + A +F
Sbjct: 77 NEKAEANQLQTHFIKWGFDQFLYVST---------------AFLDLYSKLGFVKAAQRLF 121
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
++D+ SWN LI GY + G +A L+ M P T ++ +CG
Sbjct: 122 DDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM-RRREFDPCQRTLVSLMPSCGTQQLF 180
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+GK +H ++ G + D V NAL++MY KC DL +L+F + ++ +SWN MI +
Sbjct: 181 VQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAF 240
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + + +++F M E V+ + +T+ S++SA+ G +H Y K+G ++V
Sbjct: 241 GQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC------IHCYATKIGLVENV 294
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
SV L+ Y+ G E E ++ K++V+ T +IS Y V Y +++
Sbjct: 295 SVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHL 354
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D + + ++ ++ +G+ H +++GLI ++AN I MYSK ID
Sbjct: 355 DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAV 414
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+F ++ K + SW S+I RS +A+ F +M L+ P+S+TL S+LSAC +
Sbjct: 415 FSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQN 474
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G L G+ +H + LR + +GF+ AL+DMYV+CGRM A N F S E +++WN L+
Sbjct: 475 GNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLI 534
Query: 572 TGYAERG 578
+GY G
Sbjct: 535 SGYGLFG 541
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 241/524 (45%), Gaps = 11/524 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ A K M+ + LV+L+ C ++ + +G +H + K L ++
Sbjct: 143 GNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVK 202
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +SM+ K DL +FG++ ++ + SWN +IG + + G F EA+ ++++M V
Sbjct: 203 NALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLE-ESV 261
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ T +L +H + + G +V VV +L+ YVKCG + A L
Sbjct: 262 NANSVTMVSILSANANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAEL 315
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
++ K++ ++ A+IS Y E G+ + L+ +++ + + D + + +I
Sbjct: 316 IYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDH 375
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+G HGY +K G D V N I MY F N + +F M K + SW ++IS
Sbjct: 376 IGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISS 435
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ A+ + M G PD IT+AS+LSAC GNL G LH +R L
Sbjct: 436 CAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLE 495
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ L+DMY KC +D A VF + + + SW S+I G L AL+ + +MM
Sbjct: 496 GFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMME 555
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+KPN +T IL+AC G + G++ + G+ + +++ M R G +
Sbjct: 556 KGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFE 615
Query: 552 PA--WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A + Q D + W LL+ + L E +K+ S
Sbjct: 616 EAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFS 659
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 182/413 (44%), Gaps = 13/413 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +A+ M E ++ + +V+++ + G +H +K
Sbjct: 234 NTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSIL-----SANANTGC-IHCYATK 287
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + + + +VK G + A ++ ++L + +I YA+ G + L
Sbjct: 288 IGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRL 347
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y + + +K D +++ + G H + ++ G D V N I+MY
Sbjct: 348 YSIVQHLD-MKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYS 406
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K ++ +F M K+ SWN++IS + G + + LF M PD +TL+S
Sbjct: 407 KFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLAS 466
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA G+ G +H Y+++ + V L+ MY+ G + E VF M+
Sbjct: 467 LLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPC 526
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ SW ++IS Y + A+ Y M +G P++IT + +L+AC G ++ G K +
Sbjct: 527 LASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFK 586
Query: 424 LAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + G++ +++ M + ++A+ + PD V W +++
Sbjct: 587 IMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAV--WGALL 637
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSA------CARIGALMCGK-------EIHAHALRIGV 530
L+ FR+++ + +KPN T ++ A + C + ++ H ++ G
Sbjct: 35 LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWG- 93
Query: 531 AFDGFL--PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
FD FL A LD+Y + G +K A F+ E+DV +WN L++GY G A + F
Sbjct: 94 -FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152
Query: 588 RKM 590
+M
Sbjct: 153 VEM 155
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 259/502 (51%), Gaps = 5/502 (0%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
++ L++L+R C + + +H + V L + ++++ D A V
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 153 FGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F + R D++ WN L+ GY+K F + L +++R+ PD +T+P V++ G +
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
G+ +H V++ G+ DV V ++L+ MY K + VFD MP+RD SWN +IS
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFS 330
+++ G+ K L LF M +P+ ++++ ISA S L+ E+ G+E+H +K F
Sbjct: 181 SFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLER-GKEIHRKYLKKEFE 239
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D V + L+ MY E +VF +M K +V+W +MI Y VE M
Sbjct: 240 LDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRM 299
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
EG+ P + T+ S+L AC+ NL G +H +R+ + + I I +LID+Y KC +
Sbjct: 300 IIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEV 359
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSAC 509
A VF + V SW +I G F+A+ + +M+ + ++P+ VT S+LS C
Sbjct: 360 KLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTC 419
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+++ AL GK+IH + D L +ALLDMY +CG +K A FNS ++DV +W
Sbjct: 420 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWT 479
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
++++ Y GQ A F +M
Sbjct: 480 VMISAYGSHGQPREALYHFDEM 501
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 213/393 (54%), Gaps = 4/393 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR- 261
+LR C L++ K VH ++ G +DV + +LI +Y C D ARLVF+ + R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68
Query: 262 DRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
D WN+++SGY +N + L +F ++ + PD T +VI A +G E LGR +
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+K G DV V + L+ MY F E+ +VF M +DV SW T+IS +
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDA 188
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+KA+E + ME P+ ++I +SAC+ L L+ G ++H+ ++ + + L
Sbjct: 189 EKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSAL 248
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+DMY +C ++ A EVF Q+ K++++W S+I G S + +M++ +P+
Sbjct: 249 VDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQ 308
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
TL SIL AC+R L+ GK +H + +R V D ++ +L+D+Y +CG +K A F
Sbjct: 309 TTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLK 368
Query: 560 NERDV-SAWNILLTGYAERGQGALAEEFFRKMI 591
++DV +WN++++GY G A + + +M+
Sbjct: 369 TQKDVVESWNVMISGYVSVGNWFKAVDVYDQMV 401
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 227/443 (51%), Gaps = 3/443 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H+VV K+ V + ++ + M+ KF + VF +M +RD+ SWN +I + +
Sbjct: 125 GRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQ 184
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G ++AL L+ RM +P+ + + C + L+RGKE+H ++ +E D
Sbjct: 185 RGDAEKALELFGRM-ERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEY 243
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +AL+ MY +C L AR VF M ++ ++WN+MI GY G+ + L M
Sbjct: 244 VNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEG 303
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P TL+S++ A + G+ VHGYVI+ D+ + LI +Y G + E
Sbjct: 304 TRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAE 363
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF + + V SW MIS Y KAV+ Y M + G PD +T SVLS C+ L
Sbjct: 364 TVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLA 423
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G ++H + L + ++ + L+DMYSKC + +A +F+ IP K+V+SWT +I
Sbjct: 424 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMIS 483
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVA 531
+ + EAL F +M +KP+ VT +++LSAC G + G K + G+
Sbjct: 484 AYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIE 543
Query: 532 FDGFLPNALLDMYVRCGRMKPAW 554
+ L+D+ R GR+ A+
Sbjct: 544 ASIEQYSCLIDILGRAGRLLEAY 566
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 205/419 (48%), Gaps = 6/419 (1%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
SVQV + +A+ N+ ++ G E+AL+ M+ + + ++ + C
Sbjct: 160 SVQVFDEMPERDVAS--WNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISAC 217
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+ G +H K L + +A + M+ + L A VF +M + L +WN
Sbjct: 218 SRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWN 277
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I GY G + L RM + G +P T +L C +L GK VH +VIR
Sbjct: 278 SMIRGYVARGDSKSCVELLNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIR 336
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
+AD+ + +LI +Y KCG++ A VF K SWN MISGY G + K + +
Sbjct: 337 SVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDV 396
Query: 286 FIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M V V PD +T +SV+S S+L EK G+++H + + D + + L+ MY
Sbjct: 397 YDQMVSVGVQPDIVTFTSVLSTCSQLAALEK-GKQIHLSISESRLETDELLLSALLDMYS 455
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
GN +E ++F+ + KDVVSWT MIS Y P +A+ + M+ G PD +T +
Sbjct: 456 KCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLA 515
Query: 405 VLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
VLSAC G +D G+K Q+ + G+ + I + LID+ + + +A + Q P+
Sbjct: 516 VLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPE 574
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
S L+S+L C +L K +H L +G+ D L +L+++Y C A F
Sbjct: 2 ESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVF 61
Query: 558 NSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ + DV WN L++GY++ + F+++++
Sbjct: 62 ENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLN 98
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/578 (26%), Positives = 285/578 (49%), Gaps = 50/578 (8%)
Query: 29 SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLN-ELCLNGSLEQALKYLDSMQ 87
++ F+P HF+ ++ +L N+ S + ++ +L NG DS +
Sbjct: 6 NYLFQPSLNHFNCHYSRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGP--------DSPK 57
Query: 88 ELNICVDEDALVN------LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+I + VN L++ C + G +H+ + + L L ++
Sbjct: 58 PTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYA 117
Query: 142 KFG---DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+ G DL +A +F +M +R+L +WN +I YA+ + EA ++ RM + GV PD +
Sbjct: 118 RSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKI-GVCPDNF 176
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF LR CG + GK+VH +I G++ D V NALI MY KC D VFD M
Sbjct: 177 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 236
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL--VDPDFMTLSSVISASELVGDEKL 316
+R++++WN++IS + G + L+LF+ M+E + PD T +++++ ++
Sbjct: 237 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQ 296
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR++H ++I+ + ++ V L+ MY G +++F+RM ++ SW +MI Y+
Sbjct: 297 GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 356
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ +A+ ++ M+ G PD +++S+LS+C L + G +LH +R + I+
Sbjct: 357 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 416
Query: 437 ANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
L+DMY+KC +D A +V+ Q D+N W SI+ G E+ F +M+
Sbjct: 417 QVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLES 476
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+++ + +T+V+I++ L AL+DMY +CG + A
Sbjct: 477 DIEYDVLTMVTIVNLLV-------------------------LETALVDMYSKCGAITKA 511
Query: 554 WNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F N N +++ +WN +++GY++ G A + +M
Sbjct: 512 RTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEM 549
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 219/414 (52%), Gaps = 13/414 (3%)
Query: 193 VKP--DVYTFP--CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-- 246
KP DV P +++ C +RGK +H +I GY D ++ ++ +Y + G
Sbjct: 63 TKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122
Query: 247 -DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
DL AR +F+ MP+R+ +WN MI Y +YM+ +F M ++ V PD T +S +
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASAL 182
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ G++VH +I GF D V N LI MY + E KVF M ++ V
Sbjct: 183 RVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQV 242
Query: 366 SWTTMISC-YEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+W ++IS + D V +M E+E G PD+ T ++L+ CA N + G ++H
Sbjct: 243 TWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 302
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R + II+ L+ MYS+C ++ A E+F+++ ++N SW S+I G + N + E
Sbjct: 303 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 362
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
AL F++M LN +KP+ +L S+LS+C + G+E+H +R + +G L L+D
Sbjct: 363 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 422
Query: 543 MYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
MY +CG M AW ++ +R+ + WN +L GYA +G + F +M++S
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLES 476
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 250/503 (49%), Gaps = 36/503 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A D M ++ +C D + +R+C R D G +HS + +GNA +
Sbjct: 158 EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALI 217
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV-GGVKPD 196
M+ K D VF +M +R+ +WN +I A+ G F++AL L+ RM G++PD
Sbjct: 218 DMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPD 277
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+TF +L C + +G+++H H+IR ++ V L+ MY +CG L A+ +F+
Sbjct: 278 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFN 337
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ SWN+MI GY +NGE + L LF M+ + PD +LSS++S+ + D +
Sbjct: 338 RMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 397
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD--VVSWTTMISCY 374
GRE+H ++++ ++ + L+ MY G+ + KV+ + KD W ++++ Y
Sbjct: 398 GRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGY 457
Query: 375 EGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
L ++ + +M+E++ I+ L M T +++
Sbjct: 458 ANKGLKKESFNHFLEMLESD-------------------------IEYDVLTMVT-IVNL 491
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+++ L+DMYSKC I KA VF + KN++SW ++I G + S EALI + +M
Sbjct: 492 LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPK 551
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMK 551
+ PN VT ++ILSAC+ G + G I + ++D+ R GR++
Sbjct: 552 KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLE 611
Query: 552 PAWNQFNSN---ERDVSAWNILL 571
A +F E +VS W LL
Sbjct: 612 DA-KEFVEKMPIEPEVSTWGALL 633
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 239/482 (49%), Gaps = 13/482 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+V T H + N+ + + K G A VF RD+ S+N ++ +
Sbjct: 54 LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPA- 112
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL M G V+PD T L G + +++H R G ADV V N
Sbjct: 113 --EALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGN 170
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM-LFI-MMREVLV 294
AL+T Y + G L AR VFD MP RD +SWNA+I G ++G+ ++ +F+ M+R+ V
Sbjct: 171 ALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDV 230
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD +++ SVI A G +LGR+VHG+ +K+G VS+ N L+ MY G +
Sbjct: 231 QPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARR 290
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M +DVVSWTT IS +G + A+ + M +G P+E+T +++SA
Sbjct: 291 LFDAMSERDVVSWTTAIS-MDG----EDALTLFNGMRRDGVPPNEVTFVALMSALPADCP 345
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+H ++ + +N+LI MY+K + +D A VF +P + +I+W ++I G
Sbjct: 346 ARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISG 405
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG--ALMCGKEIHAHALRIGVAF 532
N R +AL F M L PN T S+LSA + ++ G+ H+ AL +G
Sbjct: 406 YAQNGRCNDALELFSSMARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGD 465
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
++ AL+DMY + G ++ + F+ E R + AW +++ A G F M
Sbjct: 466 SEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMA 525
Query: 592 DS 593
S
Sbjct: 526 RS 527
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 232/470 (49%), Gaps = 15/470 (3%)
Query: 92 CVDEDALVNLVRLCEWKRGYDEGL---YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
V DA+ V L G EG LH++ ++ V +GNA ++ + + G LG
Sbjct: 126 AVRPDAVTCTVAL-SLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGE 184
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
A VF M RDL SWN LI G A+ G E + ++ RM G V+PD + V+ C
Sbjct: 185 ARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPAC 244
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
GG L+ G++VH ++ G E V + N L+ MY KCG AR +FD M +RD +SW
Sbjct: 245 GGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWT 304
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
IS +GE L LF MR V P+ +T +++SA + + VH +K
Sbjct: 305 TAIS---MDGE--DALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKA 359
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
S + + N LI MY ++ VF M +++++W +IS Y + + A+E +
Sbjct: 360 AVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELF 419
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMYS 445
M A P+E T ASVLSA + + + G H A+ G +A LIDMY+
Sbjct: 420 SSM-ARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYA 478
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
K ++++ + FH+ +++I+WT+II + + F M + + P+ V L++
Sbjct: 479 KRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLA 538
Query: 505 ILSACARIGALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+L+AC G + G++I + A GV + ++DM R GR+ A
Sbjct: 539 VLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEA 588
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 10/396 (2%)
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+L +++ ++ D ++ +++ C + + G +H K V +GN ++M+
Sbjct: 221 FLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYY 280
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
K G G A +F M +RD+ SW I ++AL+L+ M GV P+ TF
Sbjct: 281 KCGAPGSARRLFDAMSERDVVSWTTAISMDG-----EDALTLFNGMRR-DGVPPNEVTFV 334
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
++ + + VH ++ + N+LITMY K + AR+VFD MP+R
Sbjct: 335 ALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRR 394
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GRE 319
+ I+WNA+ISGY +NG L LF M L P+ T +SV+SA V + G+
Sbjct: 395 EIIAWNAVISGYAQNGRCNDALELFSSMARCLT-PNETTFASVLSAVTAVETVSMAYGQM 453
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
H + MGF D V LI MY GN EE K F E + +++WT +IS
Sbjct: 454 YHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGS 513
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIAN 438
+ + M G PD + + +VL+AC G +D G + +A G+ + +
Sbjct: 514 YGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYS 573
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
++DM + + +A E+ ++P +S +LG
Sbjct: 574 CVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLG 609
>gi|413923907|gb|AFW63839.1| hypothetical protein ZEAMMB73_177478 [Zea mays]
Length = 637
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/559 (27%), Positives = 269/559 (48%), Gaps = 7/559 (1%)
Query: 1 MTMAFCAKTSQTPLRQNLRNPKTRIPETSFY-FKPKTRHFSSKNAQSVQVLNTQNTSSIA 59
+ M A+T+Q P N RN +PE S K Q+ + ++ +
Sbjct: 56 LIMLPSARTTQNPGPVNPRNQFDIMPERSTENTKSAANPLDESLGTGGQIASGRDPHEVG 115
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYL 117
K+ ++ L G + ++ SM+ + V+ L ++ R C W +
Sbjct: 116 EKSESAVFVALAHAGRHAEVVELFRSMRREGVPVNRFVLPSVFRACADLWDSRMLRAV-- 173
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H +V V +G A + ++ G + A VF + ++ SW+V+IGGYA++ +
Sbjct: 174 HGLVINCSLCQHVVVGTALAAAYIDLGLVDDASKVFDDISQPNVVSWSVIIGGYARSSQW 233
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
D+A + M G+ P+ ++ CG + L RGK+ H + G+E + V N
Sbjct: 234 DKAWDAFSAM-QCSGLPPNGSVLVMAIQACGALGCLVRGKQAHTVAVVLGFERNATVWNC 292
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI MY KCG + R VFD RD++SWN +IS Y G + L + M+E D
Sbjct: 293 LIDMYGKCGSVESCRRVFDTTVSRDQVSWNTIISCYARLGLCEEALETIVRMQESGFTID 352
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
L S ++A + D GR HGY+I+ DV + L+ MY G + VF
Sbjct: 353 RFVLGSGVAACANLADIDSGRAFHGYLIRRALDTDVIQGSALVDMYGKCGYMDLARLVFD 412
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
RM+ ++ VSW ++S + + L D A++T++ ME+ ++ T ++L C +
Sbjct: 413 RMDERNDVSWDALLSGFVENGLVDSALDTFRQMESAKIKSNQHTFVNLLRLCGDRRYREY 472
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H A+R +++ LIDMY+KC CI+ + +F ++ ++N++SW +++ G
Sbjct: 473 GRQIHGHAIRVINQMNVVLETELIDMYAKCGCIEVSQLLFLRMNERNLVSWNTLLSGYVG 532
Query: 478 NNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+ + + +R+M L + P+ TL +L+ C G L G++IHAH ++ G + L
Sbjct: 533 DGQPVATVNIYRQMELARVGPDHYTLAGLLNMCRFQGLLRYGRQIHAHLIKTGSEMNVVL 592
Query: 537 PNALLDMYVRCGRMKPAWN 555
L+ MY +C R + A N
Sbjct: 593 QTLLVHMYFKCRRWRDAHN 611
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 211/421 (50%), Gaps = 3/421 (0%)
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A AG E + L++ M GV + + P V R C + D + + VH VI
Sbjct: 127 AHAGRHAEVVELFRSMR-REGVPVNRFVLPSVFRACADLWDSRMLRAVHGLVINCSLCQH 185
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V V AL Y+ G + A VFD + + + +SW+ +I GY + ++ K F M+
Sbjct: 186 VVVGTALAAAYIDLGLVDDASKVFDDISQPNVVSWSVIIGGYARSSQWDKAWDAFSAMQC 245
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ L I A +G G++ H + +GF + +V N LI MY G+ E
Sbjct: 246 SGLPPNGSVLVMAIQACGALGCLVRGKQAHTVAVVLGFERNATVWNCLIDMYGKCGSVES 305
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF S+D VSW T+ISCY L ++A+ET M+ G D + S ++ACA
Sbjct: 306 CRRVFDTTVSRDQVSWNTIISCYARLGLCEEALETIVRMQESGFTIDRFVLGSGVAACAN 365
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L ++D G H +R L + +I + L+DMY KC +D A VF ++ ++N +SW ++
Sbjct: 366 LADIDSGRAFHGYLIRRALDTDVIQGSALVDMYGKCGYMDLARLVFDRMDERNDVSWDAL 425
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G N AL FR+M +K N T V++L C G++IH HA+R+
Sbjct: 426 LSGFVENGLVDSALDTFRQMESAKIKSNQHTFVNLLRLCGDRRYREYGRQIHGHAIRVIN 485
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ L L+DMY +CG ++ + F NER++ +WN LL+GY GQ +R+
Sbjct: 486 QMNVVLETELIDMYAKCGCIEVSQLLFLRMNERNLVSWNTLLSGYVGDGQPVATVNIYRQ 545
Query: 590 M 590
M
Sbjct: 546 M 546
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 186/391 (47%), Gaps = 7/391 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++A +MQ + + LV ++ C G H+V + + N
Sbjct: 234 DKAWDAFSAMQCSGLPPNGSVLVMAIQACGALGCLVRGKQAHTVAVVLGFERNATVWNCL 293
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + VF RD SWN +I YA+ G +EAL RM G D
Sbjct: 294 IDMYGKCGSVESCRRVFDTTVSRDQVSWNTIISCYARLGLCEEALETIVRM-QESGFTID 352
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ + C + D+ G+ H ++IR + DV +AL+ MY KCG + ARLVFD
Sbjct: 353 RFVLGSGVAACANLADIDSGRAFHGYLIRRALDTDVIQGSALVDMYGKCGYMDLARLVFD 412
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ +SW+A++SG+ ENG L F M + + T +++ L GD +
Sbjct: 413 RMDERNDVSWDALLSGFVENGLVDSALDTFRQMESAKIKSNQHTFVNLL---RLCGDRRY 469
Query: 317 ---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++HG+ I++ +V + LI MY G E + +F RM +++VSW T++S
Sbjct: 470 REYGRQIHGHAIRVINQMNVVLETELIDMYAKCGCIEVSQLLFLRMNERNLVSWNTLLSG 529
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y G P V Y+ ME PD T+A +L+ C G L G ++H ++TG
Sbjct: 530 YVGDGQPVATVNIYRQMELARVGPDHYTLAGLLNMCRFQGLLRYGRQIHAHLIKTGSEMN 589
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+++ L+ MY KC+ A V I ++N
Sbjct: 590 VVLQTLLVHMYFKCRRWRDAHNVCTLIRERN 620
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 163/349 (46%), Gaps = 8/349 (2%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
S +A+ G + + + LF MR V + L SV A + D ++ R VHG V
Sbjct: 118 SESAVFVALAHAGRHAEVVELFRSMRREGVPVNRFVLPSVFRACADLWDSRMLRAVHGLV 177
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
I V V L Y+ G ++ KVF + +VVSW+ +I Y S DKA
Sbjct: 178 INCSLCQHVVVGTALAAAYIDLGLVDDASKVFDDISQPNVVSWSVIIGGYARSSQWDKAW 237
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ + M+ G P+ + + AC LG L G + H +A+ G + N LIDMY
Sbjct: 238 DAFSAMQCSGLPPNGSVLVMAIQACGALGCLVRGKQAHTVAVVLGFERNATVWNCLIDMY 297
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSII---LGLRLNNRSFEALIFFRKMMLNLKPNSVT 501
KC ++ VF ++ +SW +II L L + E ++ ++ + +
Sbjct: 298 GKCGSVESCRRVFDTTVSRDQVSWNTIISCYARLGLCEEALETIVRMQESGFTI--DRFV 355
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
L S ++ACA + + G+ H + +R + D +AL+DMY +CG M A F+ +
Sbjct: 356 LGSGVAACANLADIDSGRAFHGYLIRRALDTDVIQGSALVDMYGKCGYMDLARLVFDRMD 415
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
ER+ +W+ LL+G+ E G A + FR+M + K N + L R C
Sbjct: 416 ERNDVSWDALLSGFVENGLVDSALDTFRQMESAKIKSNQHTFVNLLRLC 464
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 233/464 (50%), Gaps = 33/464 (7%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L++ N LI GYA +G EA+ +Y M V G+ PD +TFP +L C + G +VH
Sbjct: 86 LYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVH 145
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V++ G D+ V N+LI Y CG + R VFD M +R+ +SW ++I+GY
Sbjct: 146 GVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 205
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ + LF M EV V+P+ +T+ ISA + D +LG++V + ++G + V N L+
Sbjct: 206 EAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALL 265
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY+ G+ ++F K++V + T++S Y L + + M +G PD++
Sbjct: 266 DMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKV 325
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ S ++ACA LG+L +G H R GL I+N +IDMY KC + A +VF +
Sbjct: 326 TMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSM 385
Query: 461 PDKNVISWTSIILGL------RLNNRSF-------------------------EALIFFR 489
+K V++W S+I GL L R F EA+ R
Sbjct: 386 SNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLR 445
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+M +K + VT+V I SAC +GAL K I+ + + + D L AL+DM+ RCG
Sbjct: 446 EMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCG 505
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A F N +RDVSAW + A G A E F +M+
Sbjct: 506 DPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEML 549
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 245/516 (47%), Gaps = 34/516 (6%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E YL + + I D L+ C + EG+ +H VV K + + N+
Sbjct: 104 EAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSL 163
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + G + VF +M +R++ SW LI GY+ EA+ L+ M VG V+P+
Sbjct: 164 IHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVG-VEPN 222
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T C + C + DL+ GK+V + G +++ VVNAL+ MY+KCGD+ R +FD
Sbjct: 223 PVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFD 282
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
++ + +N ++S Y ++G + L++ M + PD +T+ S I+A +GD +
Sbjct: 283 EFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSV 342
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV----------- 365
G+ H YV + G ++ N +I MY+ G RE KVF M +K VV
Sbjct: 343 GKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVR 402
Query: 366 --------------------SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
SW TMI + + ++A++ + M+ +G D +T+ +
Sbjct: 403 DGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGI 462
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
SAC LG LDL ++ + + + + L+DM+S+C A+ VF + ++V
Sbjct: 463 ASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDV 522
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
+WT+ I + + A+ F +M+ ++K + V++L+A + G + G+++
Sbjct: 523 SAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWA 582
Query: 525 ALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+I GV+ ++D+ R G ++ A++ S
Sbjct: 583 MEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKS 618
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 217/408 (53%), Gaps = 16/408 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---DLVRARLVF--DGM 258
L+TC + +LK ++H ++++ G V +N LI V+ G L A F D
Sbjct: 29 LQTCKTLIELK---QLHCNMLKKG----VFNINKLIAACVQMGTHESLNYALNAFKEDEG 81
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLG 317
K + N +I GY +G + + +++ M V+ + PD T ++SA + G
Sbjct: 82 TKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEG 141
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+VHG V+KMG D+ V N LI Y + G + G KVF M ++VVSWT++I+ Y
Sbjct: 142 VQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVV 201
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ +AV + M G P+ +T+ +SACA L +L+LG K+ L G+ S ++
Sbjct: 202 NMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVV 261
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LK 496
N L+DMY KC + E+F + DKN++ + +I+ + + E L+ +M+ +
Sbjct: 262 NALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR 321
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ VT++S ++ACA++G L GK HA+ R G+ + NA++DMY++CG+ + A
Sbjct: 322 PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKV 381
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GNWRKLMG 602
F+S + + V WN L+ G G+ LA F +M +S +W ++G
Sbjct: 382 FDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIG 429
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 179/433 (41%), Gaps = 70/433 (16%)
Query: 115 LYLHSVVSKTMSHLSVR----LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
L L V M+ L V+ + NA L M++K GD+ +F + D++L +N ++
Sbjct: 239 LELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSN 298
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y + G E L + M G +PD T + C + DL GK H +V R G E
Sbjct: 299 YVQHGLAGEVLVVLDEMLQ-KGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLER 357
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY----------- 279
++ NA+I MY+KCG A VFD M + ++WN++I+G +GE
Sbjct: 358 LDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMP 417
Query: 280 ---------MKGLMLFIMMREVLVD-----------PDFMTLSSVISASELVGDEKLGRE 319
M G M+ M E +D D +T+ + SA +G L +
Sbjct: 418 ESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKW 477
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
++ Y+ K D+ + L+ M+ G+ +VF ME +DV +WT I
Sbjct: 478 IYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGN 537
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLISYIIIAN 438
A+E + M + D+ ++L+A + G +D G +L + G+ I+
Sbjct: 538 AKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYG 597
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
++D+ + +++A ++ +P +KPN
Sbjct: 598 CMVDLLGRAGLLEEAFDLMKSMP---------------------------------IKPN 624
Query: 499 SVTLVSILSACAR 511
V S L+AC +
Sbjct: 625 DVIWGSFLAACRK 637
>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g08490-like [Brachypodium
distachyon]
Length = 929
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 265/529 (50%), Gaps = 11/529 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR-GYDEGLYLHSVVSKTMSHLSVR 131
NG ++ L M + D AL ++ R G G LH V +T V
Sbjct: 63 NGDHSGSISLLRGMLGRGLRPDRLALAAAIKSASALRDGESLGRCLHGFVVRTGHAAGVA 122
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ A + M+ + G L A VF +M D WN+LI G ++AG+FD+ L++ M G
Sbjct: 123 VAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACG 182
Query: 192 GVK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---G 246
+ P T V+ C + L+ G +H +V++ G E+D NALI++Y KC G
Sbjct: 183 ADESMPTAVTVAVVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSG 242
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A F + +D +SWN++I+G+ ENG + + L LF M P++ T+++++
Sbjct: 243 TMDDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILP 302
Query: 307 ASELVGDEK-LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ K G+EVHG+V ++G D+SVCN L+ Y E +F M ++D++
Sbjct: 303 VCSFMEHGKYYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDII 362
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W T+IS Y + + ++ + + + G PD +++ S+L+ACA +G+ G+ +H
Sbjct: 363 TWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYI 422
Query: 426 MRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
R ++ + N+L+ YS+C D AL F I K+ ISW +I+ + E
Sbjct: 423 FRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRGKHIEE 482
Query: 485 LI-FFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
F +M + + +SVT+++++ G+ +E H ++LR+G + + NA+LD
Sbjct: 483 FFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILD 542
Query: 543 MYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y +CG + A F N R++ +N +++ Y + AE F +M
Sbjct: 543 AYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQM 591
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/597 (25%), Positives = 277/597 (46%), Gaps = 56/597 (9%)
Query: 56 SSIATKNP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW-KRGY 111
SSI K+ NS + NG ++AL M + + N++ +C + + G
Sbjct: 252 SSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEHGK 311
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
G +H V + ++ + + NA ++ + K ++ A +F M RD+ +WN +I GY
Sbjct: 312 YYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGY 371
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EA 230
G+ L L+ R+ G + PD + +L C V D K G VH ++ R
Sbjct: 372 LMNGYHSRVLDLFHRLLSTG-MTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQ 430
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM-LFIMM 289
+ ++N+L++ Y +C A F + +D ISWNA++S + G++++ LF M
Sbjct: 431 ETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKRGKHIEEFFKLFNEM 490
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP----------- 338
+ D +T+ +V+ S L G K+ RE HGY +++G+ + SV N
Sbjct: 491 CHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILDAYAKCGYP 550
Query: 339 --------------------LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+I YL + EE E +F++M KD +W MI Y +
Sbjct: 551 QDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNG 610
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ D+A ++ ++ PD I+I ++L AC L + L + H +R L I +
Sbjct: 611 MCDQAFSLFRQLQC----PDTISITNILLACIHLSLVQLVRQCHGYMLRASL-EDIHLEG 665
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
+L+D YSKC I A +F P K+++++T++I G ++ + EA+ F +M+ L + P
Sbjct: 666 SLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGP 725
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHA---LRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ V L ++LSAC+ G + G +I RI + + ++D+ R GR++ A+
Sbjct: 726 DHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHY--TCMVDLLSRGGRLQDAY 783
Query: 555 N---QFNSNERDVSAWNILLTGYAERGQ---GAL-AEEFFRKMIDSKGNWRKLMGLF 604
N + + +AW L+ G G L A++ F GN+ + ++
Sbjct: 784 NFALDMPPHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGDIGNYVTVSNIY 840
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 175/353 (49%), Gaps = 10/353 (2%)
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI-SASE 309
A +FD +P D + ++ NG++ + L M + PD + L++ I SAS
Sbjct: 38 AHSLFDAVPATDHRHCSELLRARTANGDHSGSISLLRGMLGRGLRPDRLALAAAIKSASA 97
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
L E LGR +HG+V++ G + V+V ++ MY G + VF M D V W
Sbjct: 98 LRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNI 157
Query: 370 MISCYEGSVLPDKAVETYQMMEAEG---SMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+I+ + D + ++ M A G SMP +T+A V+ CA L L G+ +H +
Sbjct: 158 LITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPVCAKLRVLRAGMSIHGYVV 217
Query: 427 RTGLISYIIIANTLIDMYSKC---KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+TGL S + N LI +Y+KC +D A F I K+V+SW SII G N E
Sbjct: 218 KTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKE 277
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARI-GALMCGKEIHAHALRIGVAFDGFLPNALL 541
AL F +M + PN T+ +IL C+ + GKE+H R+G+ D + NAL+
Sbjct: 278 ALALFGQMTSDKCLPNYSTVANILPVCSFMEHGKYYGKEVHGFVFRVGLYVDISVCNALM 337
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
Y + M+ A + F S N RD+ WN +++GY G + + F +++ +
Sbjct: 338 THYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNGYHSRVLDLFHRLLST 390
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 41/407 (10%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
+ + NT I T N + ++ +NG + L + + D +L++L+ C
Sbjct: 351 SIFRSMNTRDIITWN--TIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQ 408
Query: 108 KRGYDEGLYLHSVVSK-TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
G+ +H + + + H L N+ +S + + A + F + +D SWN
Sbjct: 409 VGDAKGGMGVHGYIFRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNA 468
Query: 167 LIGGYAKAG-FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
++ AK G +E L+ M + D T V+R K +E H + +R
Sbjct: 469 ILSACAKRGKHIEEFFKLFNEMCH-EVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLR 527
Query: 226 FGYEADVDVVNALITMYVKCG-------------------------------DLVRARLV 254
GY + V NA++ Y KCG + A ++
Sbjct: 528 VGYIGETSVANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEII 587
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ M K+D+ +WN MI Y +NG + LF ++ PD +++++++ A +
Sbjct: 588 FNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQLQC----PDTISITNILLACIHLSLV 643
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+L R+ HGY+++ +D+ + L+ Y GN + +F +KD+V++T MI Y
Sbjct: 644 QLVRQCHGYMLRASL-EDIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGY 702
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ ++AVE + M G PD + + ++LSAC+ G +D GIK+
Sbjct: 703 AMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACSHAGLVDAGIKI 749
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL- 406
++ + +F + + D + ++ + ++ + M G PD + +A+ +
Sbjct: 34 HKSDAHSLFDAVPATDHRHCSELLRARTANGDHSGSISLLRGMLGRGLRPDRLALAAAIK 93
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
SA A LG LH +RTG + + +A ++DMY +C + A VF ++ + +
Sbjct: 94 SASALRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTV 153
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML----NLKPNSVTLVSILSACARIGALMCGKEIH 522
W +I G + FR M+ P +VT+ ++ CA++ L G IH
Sbjct: 154 CWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPVCAKLRVLRAGMSIH 213
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCG---RMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ ++ G+ D NAL+ +Y +CG M A F+S +DV +WN ++ G++E G
Sbjct: 214 GYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDVVSWNSIIAGHSENG 273
Query: 579 QGALAEEFFRKMIDSK 594
A F +M K
Sbjct: 274 LFKEALALFGQMTSDK 289
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 246/469 (52%), Gaps = 15/469 (3%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ H T+ + L + + G + +A ++F ++ ++ F WN +I GYA
Sbjct: 44 LHAHVTTGGTLRR-NTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
AL LY +M G KPD +T+P VL+ CG + + G++VH V+ G E DV V
Sbjct: 103 NSPSRALFLYLKMLHFGQ-KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYV 161
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N++++MY K GD+ AR+VFD M RD SWN M+SG+ +NGE +F MR
Sbjct: 162 GNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGF 221
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS---VCNPLIKMYLSFGNREE 351
D TL +++SA V D K+G+E+HGYV++ G S V + N +I MY + +
Sbjct: 222 VGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSC 281
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
K+F + KDVVSW ++IS YE +A+E + M G++PDE+T+ SVL+AC
Sbjct: 282 ARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ L LG + ++ G + +++ LI MY+ C + A VF ++P+KN+ + T +
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401
Query: 472 ILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IG 529
+ G ++ R EA+ IF+ + + P+ ++LSAC+ G + GKEI R
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYS 461
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTG 573
V + L+D+ R G + A+ + NE W LL+
Sbjct: 462 VEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNE---DVWTALLSA 507
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 206/395 (52%), Gaps = 6/395 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+L++ L + ++H HV G + + L Y CG + A+ +FD + +
Sbjct: 28 LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN+MI GY N + L L++ M PD T V+ A + ++GR+VH
Sbjct: 88 NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
V+ G +DV V N ++ MY FG+ E VF RM +D+ SW TM+S + +
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI---IIAN 438
A E + M +G + D T+ ++LSAC + +L +G ++H +R G + + N
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKP 497
++IDMY C+ + A ++F + K+V+SW S+I G +F+AL +F R +++ P
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ VT++S+L+AC +I AL G + ++ ++ G + + AL+ MY CG + A F
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVF 387
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ E+++ A +++TG+ G+G A F +M+
Sbjct: 388 DEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 211/401 (52%), Gaps = 11/401 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H++V V +GN+ LSM+ KFGD+ A VF +M RDL SWN ++ G+ K
Sbjct: 143 GRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVK 202
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G A ++ M G V D T +L CG V DLK GKE+H +V+R G V
Sbjct: 203 NGEARGAFEVFGDMRRDGFVG-DRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVC 261
Query: 234 ---VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
++N++I MY C + AR +F+G+ +D +SWN++ISGY + G+ + L LF M
Sbjct: 262 NGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMV 321
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD +T+ SV++A + +LG V YV+K G+ +V V LI MY + G+
Sbjct: 322 VVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLV 381
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+VF M K++ + T M++ + +A+ + M +G PDE +VLSAC+
Sbjct: 382 CACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACS 441
Query: 411 CLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVI 466
G +D G ++ +++ + + L+D+ + +D+A V + P+++V
Sbjct: 442 HSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV- 500
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
WT+++ RL +R+ + + + + L P+ V+ LS
Sbjct: 501 -WTALLSACRL-HRNVKLAVISAQKLFELNPDGVSGYVCLS 539
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 253/500 (50%), Gaps = 41/500 (8%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V LG LS+ V+ GDL +A +F ++ + F +N LI GY+ + ++L L+++M
Sbjct: 72 VTLGK-LLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVS 130
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G + P+ +TFP VL+ C P VH I+ G V NA++T YV C ++
Sbjct: 131 AGPM-PNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLIL 189
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD + R +SWN+MI+GY + G + ++LF M ++ V+ D TL S++SAS
Sbjct: 190 SARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASS 249
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ LGR VH Y++ G D V N LI MY G+ + + VF +M KDVVSWT+
Sbjct: 250 KHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTS 309
Query: 370 MISCYEGSVLPDKAVETYQMMEAE-------------------------------GSMPD 398
M++ Y L + AV+ + M + G MPD
Sbjct: 310 MVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPD 369
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ T+ S+LS C+ G+L LG + H + + + N+LIDMY+KC + A+++F
Sbjct: 370 DATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFF 429
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+P+KNV+SW II L L+ EA+ F+ M + L P+ +T +LSAC+ G +
Sbjct: 430 GMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDM 489
Query: 518 GK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLT 572
G+ +I RI + + ++D+ R G + A Q + DV W LL
Sbjct: 490 GRYYFDIMISTFRISPGVEHY--ACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLG 547
Query: 573 GYAERGQGALAEEFFRKMID 592
G +A++ +++++
Sbjct: 548 ACRIYGNLEIAKQIMKQLLE 567
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 210/438 (47%), Gaps = 36/438 (8%)
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ W P T +L C +KR K VH +I G A V + L+++ V+
Sbjct: 28 KTIWHQLKSPTHQTLHHLLDQCSS---MKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQE 84
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GDL A L+FD +P+ ++ +N +I GY + + MK L+LF M P+ T V+
Sbjct: 85 GDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVL 144
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A VH IK+G V N ++ Y++ +VF + + +V
Sbjct: 145 KACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIV 204
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +MI+ Y D+A+ +Q M G D T+ S+LSA + NLDLG +H
Sbjct: 205 SWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYI 264
Query: 426 MRTGLISYIIIANTLIDMYSKC-----------KCIDK--------------------AL 454
+ TG+ I+ N LIDMY+KC + +DK A+
Sbjct: 265 VITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAV 324
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++F+ +P KNV+SW SII L + EA+ F +M ++ + P+ TLVSILS C+ G
Sbjct: 325 QIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTG 384
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLT 572
L GK+ H + + L N+L+DMY +CG ++ A + F E++V +WN+++
Sbjct: 385 DLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIG 444
Query: 573 GYAERGQGALAEEFFRKM 590
A G G A E F+ M
Sbjct: 445 ALALHGFGEEAIEMFKSM 462
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 142/331 (42%), Gaps = 34/331 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++A+ M +L + D LV+L+ D G ++H + T + +
Sbjct: 217 GFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVT 276
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF----------------- 176
NA + M+ K G L A +VF +M D+D+ SW ++ YA G
Sbjct: 277 NALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVV 336
Query: 177 --------------FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+ EA+ L+ RM + GV PD T +L C DL GK+ H +
Sbjct: 337 SWNSIICCLVQEGQYTEAVELFHRM-CISGVMPDDATLVSILSCCSNTGDLALGKQAHCY 395
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ V + N+LI MY KCG L A +F GMP+++ +SWN +I +G +
Sbjct: 396 ICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEA 455
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK-MGFSDDVSVCNPLIK 341
+ +F M+ + PD +T + ++SA G +GR +I S V ++
Sbjct: 456 IEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVD 515
Query: 342 MYLSFGNREEGEKVFSRMESK-DVVSWTTMI 371
+ G E + +M K DVV W ++
Sbjct: 516 LLGRGGFLGEAMTLIQKMPVKPDVVVWGALL 546
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 9/280 (3%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
+VQ+ N ++ + N S + L G +A++ M + D+ LV+++ C
Sbjct: 323 AVQIFNHMPVKNVVSWN--SIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCC 380
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
G H + + +SV L N+ + M+ K G L A +F M ++++ SWN
Sbjct: 381 SNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWN 440
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHV 223
V+IG A GF +EA+ +++ M G+ PD TF +L C G+ D+ R + +
Sbjct: 441 VIIGALALHGFGEEAIEMFKSM-QASGLYPDEITFTGLLSACSHSGLVDMGR-YYFDIMI 498
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISG--YFENGEYM 280
F V+ ++ + + G L A + MP K D + W A++ + N E
Sbjct: 499 STFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIA 558
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
K +M ++ ++ LS++ S S+ D K R++
Sbjct: 559 KQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKI 598
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 275/566 (48%), Gaps = 21/566 (3%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDAL-----VNLVRLCEWKRGYDEG- 114
+NP+ + + +G L AL+ +S+ + D L LV C R + +G
Sbjct: 2 QNPSGTILQFYHSGRLSAALRAFESL-PFSPASAPDPLSAAAYAALVAACSRLRSFPQGR 60
Query: 115 -LYLHSVVSKTMSHLSVR---LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
++ H + S + R L N ++M+ + A VF M DR+ SW +I
Sbjct: 61 LVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAA 120
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+A+ +A+ L+ M + G PD + +R C + DL G++VH I+
Sbjct: 121 HAQNSRCADAMGLFSSMLRL-GTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGG 179
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MM 289
+ V NAL+TMY K G + +F+ + +D SW ++I+G + G M L +F M+
Sbjct: 180 HLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMI 239
Query: 290 REVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
E + P+ SV A S ++ + G ++HG +K + L MY
Sbjct: 240 AEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNK 299
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ KVF R+ES D+VSW ++I+ + L +A+ + M PD IT+ ++L A
Sbjct: 300 LDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCA 359
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C L G +H ++ GL +++ N+LI MY++C A++VFH+ D++V++W
Sbjct: 360 CVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTW 419
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGKEIHAHAL 526
SI+ + +R E + +++ + P + ++L ++LSA A +G K++HA+A
Sbjct: 420 NSILTAC-VQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAF 478
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAE 584
++G+ D L NAL+D Y +CG + A F RDV +W+ L+ GYA+ G A
Sbjct: 479 KVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 538
Query: 585 EFFRKM--IDSKGNWRKLMGLFRKCQ 608
+ F +M + K N +G+ C
Sbjct: 539 DLFARMRNLGVKPNHVTFVGVLIACS 564
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 267/516 (51%), Gaps = 24/516 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSV 130
N A+ SM L DE AL + VR C G ++ ++ S HL V
Sbjct: 124 NSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIV 183
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA ++M+ K G +G + +F ++ D+DLFSW +I G A+ G +AL +++ M
Sbjct: 184 Q--NALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAE 241
Query: 191 GGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G P+ + F V R C V + L+ G+++H +++ + + +L MY +C L
Sbjct: 242 GMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLD 301
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF + D +SWN++I+ + +G + ++LF MR + PD +T+ +++ A
Sbjct: 302 SAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACV 361
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ GR +H Y++K+G DV VCN LI MY + VF +DVV+W +
Sbjct: 362 GCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNS 421
Query: 370 MIS-CYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLAM 426
+++ C + + D + ++++ + SMP D I++ +VLSA A LG ++ ++H A
Sbjct: 422 ILTACVQHRHMED-VFKLFRLLHS--SMPSLDRISLNNVLSASAELGYFEMAKQVHAYAF 478
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEAL 485
+ GL+S I++N LID Y+KC +D A ++F + ++V SW+S+I+G + EAL
Sbjct: 479 KVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 538
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NA 539
F +M L +KPN VT V +L AC+R+G + G + I G +P +
Sbjct: 539 DLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG----CYYYSIMEPEYGIVPTKEHCSC 594
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
++D+ R GR+ A + E D+ WN LL
Sbjct: 595 VIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAA 630
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 181/350 (51%), Gaps = 4/350 (1%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + M+ + L A VF ++ DL SWN LI ++ G EA+ L+ M +
Sbjct: 287 GCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRY-SS 345
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD T +L C G L++G+ +H ++++ G DV V N+LI+MY +C D A
Sbjct: 346 LKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAM 405
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF RD ++WN++++ ++ LF ++ + D ++L++V+SAS +G
Sbjct: 406 DVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELG 465
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMI 371
++ ++VH Y K+G D + N LI Y G+ ++ K+F M + +DV SW+++I
Sbjct: 466 YFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 525
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGL 430
Y +A++ + M G P+ +T VL AC+ +G +D G + + G+
Sbjct: 526 VGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGI 585
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ + +ID+ ++ + +A + Q+P + ++I W +++ R +N
Sbjct: 586 VPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHN 635
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 8/314 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N +G L +A+ M+ ++ D ++ L+ C +G +HS + K
Sbjct: 319 NSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVK 378
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V + N+ +SM+ + D A VF + DRD+ +WN ++ + ++ L
Sbjct: 379 LGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKL 438
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ R+ D + VL + + K+VH + + G +D + NALI Y
Sbjct: 439 F-RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYA 497
Query: 244 KCGDLVRARLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG L A +F+ M RD SW+++I GY + G + L LF MR + V P+ +T
Sbjct: 498 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFV 557
Query: 303 SVISASELVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
V+ A VG G + Y I + G C+ +I + G E K +M
Sbjct: 558 GVLIACSRVGLVDEG--CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQM 615
Query: 360 E-SKDVVSWTTMIS 372
D++ W T+++
Sbjct: 616 PFEPDIIMWNTLLA 629
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 224/413 (54%), Gaps = 15/413 (3%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ YTFP L+ C + D G+ +H H I G +AD+ V AL+ MYVKC L A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFMTLSSVISASEL 310
+F MP RD ++WNAM++GY +G Y + +L + M+ + P+ TL +++
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 311 VGDEKLGREVHGYVI----------KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
G G VH Y I K +D V + L+ MY G+ +VF M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGI 419
+++ V+W+ +I + +A ++ M A+G +IAS L ACA L +L +G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+LH L ++G+ + + N+L+ MY+K ID+A+ +F ++ K+ +S+++++ G N
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
R+ EA + F+KM N++P++ T+VS++ AC+ + AL G+ H + G+A + + N
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +CGR+ + FN RD+ +WN ++ GY G G A F +M
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 20/458 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS-LYQRMFWV 190
+ A L M+VK L A ++F M RDL +WN ++ GYA G + A++ L +
Sbjct: 47 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 106
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD----------VDVVNALIT 240
++P+ T +L L +G VH + IR + V + AL+
Sbjct: 107 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 166
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
MY KCG L+ AR VFD MP R+ ++W+A+I G+ + +LF M+ + L
Sbjct: 167 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+++S + A + ++G ++H + K G D++ N L+ MY G ++ +F M
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD VS++ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL S I N LIDMY+KC ID + +VF+ +P ++++SW ++I G ++
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 406
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGF 535
EA F +M L P+ VT + +LSAC+ G ++ GK + H + + +
Sbjct: 407 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 466
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G + A+ S DV W LL
Sbjct: 467 I--CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 225/466 (48%), Gaps = 19/466 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQEL--NICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N+ L +G A+ +L SMQ + + LV L+ L + +G +H+
Sbjct: 80 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 139
Query: 122 SKTMSHLS----------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+ H + V LG A L M+ K G L +A VF M R+ +W+ LIGG+
Sbjct: 140 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 199
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+A L++ M G + LR C + L+ G+++H + + G AD
Sbjct: 200 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD 259
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ N+L++MY K G + +A +FD M +D +S++A++SGY +NG + ++F M+
Sbjct: 260 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+PD T+ S+I A + + GR HG VI G + + S+CN LI MY G +
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF+ M S+D+VSW TMI+ Y L +A + M G PD +T +LSAC+
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 412 LGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWT 469
G + G H + GL + ++D+ S+ +D+A E +P + +V W
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ R+ ++ + +M+ L P N V L +I SA R
Sbjct: 500 ALLGACRV-YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 544
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 241/457 (52%), Gaps = 7/457 (1%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+L+ C + +GL LH++ KT + V + N L+++ K L A VF +M +R
Sbjct: 8 SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER 67
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+L SW+ +I GY + G AL L+ ++ + P+ Y + V+ C + L +GK++
Sbjct: 68 NLVSWSAMISGYEQIGEPISALGLFSKL----NIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H ++FG ++ V NALITMY+KCG A L ++ + + +++NA+I+G+ EN +
Sbjct: 124 HGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQP 183
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
KG + MM + PD T ++ D K G +H IK+ + + N +
Sbjct: 184 DKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLI 243
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PD 398
I MY EE EK F +E KD++SW T IS +KA+E ++ M E + PD
Sbjct: 244 ITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPD 303
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E T AS L+AC+ L ++ G ++H +RT L + N LI+MY+KC CI KA +F
Sbjct: 304 EFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFS 363
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMC 517
++ +N++SW ++I G + +A F KM + +KP+SVT V +L+A G +
Sbjct: 364 KMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDE 423
Query: 518 G-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
G ++ G++ + + L+D+ R GR+ A
Sbjct: 424 GLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEA 460
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 203/391 (51%), Gaps = 6/391 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
++ C L++G +H I+ +DV V N ++ +Y KC L AR VFD M +R+
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW+AMISGY + GE + L LF + V P+ +SVISA + G+++HG
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLFSKLNIV---PNEYVYASVISACASLKGLVQGKQIHG 125
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+K G V N LI MY+ G + ++ + V++ +I+ + + PDK
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDK 185
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
E +MM +G PD T +L C +L G LH ++ L S I N +I
Sbjct: 186 GFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIIT 245
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSV 500
MYSK +++A + F I +K++ISW + I N +AL F++M+ ++P+
Sbjct: 246 MYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEF 305
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T S L+AC+ + ++ GK+IH H +R + D NAL++MY +CG + A+ F+
Sbjct: 306 TFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKM 365
Query: 561 E-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
E +++ +WN ++ G+ G G A E F KM
Sbjct: 366 EHQNLVSWNTMIAGFGNHGFGGKAFELFAKM 396
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 157/373 (42%), Gaps = 41/373 (10%)
Query: 62 NP---NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
NP N+ + N ++ + L M + D V L+ C + G LH
Sbjct: 166 NPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLH 225
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
K + + +GN ++M+ K L A F + ++DL SWN I + +
Sbjct: 226 CQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHE 285
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+AL ++ M V+PD +TF L C G+ + GK++H H+IR DV NAL
Sbjct: 286 KALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNAL 345
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
I MY KCG + +A +F M ++ +SWN MI+G+ +G K LF M+ + V PD
Sbjct: 346 INMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDS 405
Query: 299 MTLSSVISASELVG--DEK--------------------------LGR-----EVHGYVI 325
+T +++AS G DE LGR E Y+
Sbjct: 406 VTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMK 465
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR----MESKDVVSWTTMISCYEGSVLPD 381
K F D V L+ G+ + G K F+R ++ + + + Y + D
Sbjct: 466 KFPFGHDTVVLGSLLSACRLHGDVDTG-KCFARQLLKLQPATTSPYVLLSNLYASDEMWD 524
Query: 382 KAVETYQMMEAEG 394
E +++++ G
Sbjct: 525 GVAEAWKLLKGSG 537
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 7/279 (2%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G +H IK DV V N ++ +Y E +VF M +++VSW+ MIS YE
Sbjct: 22 GLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQ 81
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P A+ + + +P+E ASV+SACA L L G ++H A++ GL S +
Sbjct: 82 IGEPISALGLFSKLNI---VPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFV 138
Query: 437 ANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+N LI MY KC KC D AL +++ + N +++ ++I G N + + R M +
Sbjct: 139 SNALITMYMKCGKCSD-ALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDG 197
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
P+ T V +L C L G+ +H +++ + F+ N ++ MY + ++ A
Sbjct: 198 FFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAE 257
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
F S E+D+ +WN ++ + A E F++M++
Sbjct: 258 KAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLN 296
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 111/190 (58%), Gaps = 3/190 (1%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ S++ C+ L G+ LH +A++T S +I++N ++++Y+KC+ + +A +VF ++
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
++N++SW+++I G AL F K LN+ PN S++SACA + L+ GK+I
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSK--LNIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
H AL+ G+ F+ NAL+ MY++CG+ A +N E + A+N L+TG+ E Q
Sbjct: 124 HGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQP 183
Query: 581 ALAEEFFRKM 590
E R M
Sbjct: 184 DKGFEVLRMM 193
>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 723
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 256/465 (55%), Gaps = 10/465 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +GN+ ++K GDL F M RD SWNV++ G GF +E L + ++
Sbjct: 69 VSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLR- 127
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V G +P+V T V+ C + G+++H +VIR G+ V N+++ +Y + D +
Sbjct: 128 VWGFEPNVSTLVLVIHACRSL--WFDGEKIHGYVIRSGFWRISSVQNSILCLYSEF-DSL 184
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR +FD M +RD ISW+ +I Y ++ E + GL LF M+RE +PD +T++SV+ A
Sbjct: 185 SARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSVLKAC 244
Query: 309 ELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
++ D +GR VHG+ I+ GF DV V N LI MY + + +VF +++VSW
Sbjct: 245 AVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRNIVSW 304
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
++++ + + D+A+E +++M+ E DE+T+ S+L C + +H + +R
Sbjct: 305 NSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIR 364
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G S + ++L+D Y+ C +D A VF + K+V+S +++I GL RS EA+
Sbjct: 365 RGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSDEAISI 424
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVR 546
F +M KPN++T++S+LSAC+ L K H A+R G+A + + +++D Y +
Sbjct: 425 FCQM--RDKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAK 482
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG + A F+ E+ + +W ++++ YA G A F +M
Sbjct: 483 CGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEM 527
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 220/438 (50%), Gaps = 19/438 (4%)
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G + E +S Y + G D + FP V + C + L +G +E+ V V
Sbjct: 23 GKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQG-----------FESYVSV 71
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N++ Y+KCGDL FD M RD +SWN ++ G ++G +GL F +R
Sbjct: 72 GNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGF 131
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+P+ TL VI A + + G ++HGYVI+ GF SV N ++ +Y F + K
Sbjct: 132 EPNVSTLVLVIHACRSLWFD--GEKIHGYVIRSGFWRISSVQNSILCLYSEF-DSLSARK 188
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLG 413
+F M +DV+SW+ +I Y S P +E ++ M E + PD +T+ SVL ACA L
Sbjct: 189 LFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLD 248
Query: 414 NLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++D+G +H ++R G + + + N+LIDMYSK D A VF + +N++SW SI+
Sbjct: 249 DIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSIL 308
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G N R EAL FR M L+ + VTLVS+L C + K IH +R G
Sbjct: 309 AGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYE 368
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++L+D Y C + A F+S + +DV + + +++G G+ A F +M
Sbjct: 369 SNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQM 428
Query: 591 IDSKGNWRKLMGLFRKCQ 608
D K N ++ L C
Sbjct: 429 RD-KPNAITVISLLSACS 445
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 235/467 (50%), Gaps = 12/467 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L ++ +F L A +F +M +RD+ SW+V+I Y ++ L L++ M
Sbjct: 172 NSILCLYSEFDSLS-ARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKT 230
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRAR 252
+PD T VL+ C + D+ G+ VH IR G++ DV V N+LI MY K D A
Sbjct: 231 EPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAF 290
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD R+ +SWN++++G+ N Y + L +F +M++ ++ D +TL S++ +
Sbjct: 291 RVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFE 350
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG +I+ G+ + + L+ Y S ++ VF M KDVVS +TMIS
Sbjct: 351 HPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMIS 410
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-I 431
D+A+ + M + P+ IT+ S+LSAC+ L H +A+R GL I
Sbjct: 411 GLGRCGRSDEAISIFCQMRDK---PNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAI 467
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I + +++D Y+KC ID A F QI +K+++SWT II +N +AL F +M
Sbjct: 468 NDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEM 527
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ PN+VT ++ LSAC G + G I + + ++DM R G +
Sbjct: 528 KRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQHYSCIVDMLSRAGEI 587
Query: 551 KPAWNQFNSNERDV----SAWNILLTGYAER-GQGALAEEFFRKMID 592
A + DV SAW +L+G R G + E ++++
Sbjct: 588 DTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVVAEVLE 634
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L N ++AL+ M++ + DE LV+L+++C++ + H + K
Sbjct: 305 NSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKF--------FEHPLPCK 356
Query: 124 TMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
++ + +R G ++ + + + A VF M +D+ S + +I G + G
Sbjct: 357 SIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCG 416
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDV 234
DEA+S++ +M KP+ T +L C L+ K H IR G D+ V
Sbjct: 417 RSDEAISIFCQM----RDKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISV 472
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+++ Y KCG + AR FD + ++ +SW +IS Y NG K L F M+
Sbjct: 473 DTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEMKRDSY 532
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
P+ +T + +SA HG ++K G
Sbjct: 533 TPNAVTYLAALSACN-----------HGGLVKKGL 556
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 268/542 (49%), Gaps = 19/542 (3%)
Query: 65 SRLNELCLNGSLEQALKYLDS-------MQELNICVDEDALVNLVRLCEWKRGYDEGLYL 117
S+ ELCL+ LE A KYL M +L V D L L++ C E L
Sbjct: 245 SKTQELCLS-LLEIADKYLRHACVCKCFMNKLCFSVITDTL--LLKKCRITTSLQEARQL 301
Query: 118 HSVVSKTMS---HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
H+++ T + S L N +SM+ + G L A VF KM R S+N L+ Y++
Sbjct: 302 HALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRV 361
Query: 175 G--FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
A +LY +M +G ++P T +L+ DL G +H ++FG+ D+
Sbjct: 362 SEQHCVYAFNLYTQMENMG-LRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDI 420
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V +L+ MY C DL A VF M +RD ++WN++I GY +N + KG+ LFI M V
Sbjct: 421 CVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWV 480
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P T ++SA + D GR +H VI S D+ + N L+ MY + G+ +
Sbjct: 481 GFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTA 540
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACAC 411
+FSRME D+VSW +MIS Y + +KA+ + ++A PD+ T A ++SA
Sbjct: 541 YMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGA 600
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
G LH ++ G + + + +TL+ MY K + + AL VF IP K+ I WT +
Sbjct: 601 FPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEM 660
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I G A+ F +M + + L +LS CA + L G+ IH +A ++G
Sbjct: 661 ITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGY 720
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ + +L+DMY + G ++ A+ F+ + D+ WN +L G++ G A + F +
Sbjct: 721 DVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEE 780
Query: 590 MI 591
+I
Sbjct: 781 II 782
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 228/465 (49%), Gaps = 6/465 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL LH+ K + + + L+M+ DL A VF M +RD +WN LI GY K
Sbjct: 404 GLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLK 463
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
++ + L+ M WVG P VYTF +L C + D G+ +H VI D+
Sbjct: 464 NDKIEKGVYLFIEMMWVG-FTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLH 522
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV- 292
+ NAL+ MY GD A ++F M K D +SWN+MISGYFEN + K + LF+ ++ +
Sbjct: 523 LQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALC 582
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
PD T + +ISA+ G+ +HG VIK GF V V + L+ MY E
Sbjct: 583 FPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAA 642
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF + KD + WT MI+ Y A+ + M E D+ ++ VLS CA L
Sbjct: 643 LRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYL 702
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L G +H A + G + ++ +LIDMY+K ++ A VF Q+ ++ W S++
Sbjct: 703 AILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSML 762
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + +AL F +++ L P+ VT +S+LSAC+ + GK + + IG+
Sbjct: 763 GGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLV 822
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG 573
+ ++ + R ++ A N + E +V W LL+
Sbjct: 823 PGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSA 867
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 189/380 (49%), Gaps = 2/380 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++ C + Y G +H+ V + L NA + M+ GD A+ +F +M D
Sbjct: 492 ILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWD 551
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN +I GY + ++A++L+ ++ + KPD YT+ ++ G P GK +H
Sbjct: 552 LVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLH 611
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
VI+ G+ V V + L++MY K + A VF +P +D I W MI+GY + + M
Sbjct: 612 GQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGM 671
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ F M + + D LS V+S + + G +H Y K+G+ ++SV LI
Sbjct: 672 GAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLI 731
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY GN E VFS++ D+ W +M+ + + D A++ ++ + +G +PD++
Sbjct: 732 DMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQV 791
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T S+LSAC+ ++ G L GL+ + ++ + S+ +++A E+ ++
Sbjct: 792 TFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKS 851
Query: 461 P--DKNVISWTSIILGLRLN 478
P + NV W +++ +N
Sbjct: 852 PYVEDNVELWRTLLSACVIN 871
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D+ L ++ +C + +G +H K + + + + + M+ K G+L A+ V
Sbjct: 687 IDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLV 746
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F ++ DL WN ++GG++ G D+AL L++ + G V PD TF +L C
Sbjct: 747 FSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLV-PDQVTFLSLLSACSHSRL 805
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRIS-WNAMI 270
+++GK + ++ G + ++T+ + L A + + P D + W ++
Sbjct: 806 VEQGKLLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLL 865
Query: 271 SG 272
S
Sbjct: 866 SA 867
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 224/413 (54%), Gaps = 15/413 (3%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ YTFP L+ C + D G+ +H H I G +AD+ V AL+ MYVKC L A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFMTLSSVISASEL 310
+F MP RD ++WNAM++GY +G Y + +L + M+ + P+ TL +++
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 311 VGDEKLGREVHGYVI----------KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
G G VH Y I K +D V + L+ MY G+ +VF M
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGI 419
+++ V+W+ +I + +A ++ M A+G +IAS L ACA L +L +G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+LH L ++G+ + + N+L+ MY+K ID+A+ +F ++ K+ +S+++++ G N
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
R+ EA + F+KM N++P++ T+VS++ AC+ + AL G+ H + G+A + + N
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +CGR+ + FN RD+ +WN ++ GY G G A F +M
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 20/458 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS-LYQRMFWV 190
+ A L M+VK L A ++F M RDL +WN ++ GYA G + A++ L +
Sbjct: 47 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 106
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD----------VDVVNALIT 240
++P+ T +L L +G VH + IR + V + AL+
Sbjct: 107 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 166
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
MY KCG L+ AR VFD MP R+ ++W+A+I G+ + +LF M+ + L
Sbjct: 167 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+++S + A + ++G ++H + K G D++ N L+ MY G ++ +F M
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD VS++ ++S Y + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL S I N LIDMY+KC ID + +VF+ +P ++++SW ++I G ++
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 406
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGF 535
EA F +M L P+ VT + +LSAC+ G ++ GK + H + + +
Sbjct: 407 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 466
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+ ++D+ R G + A+ S DV W LL
Sbjct: 467 I--CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 225/466 (48%), Gaps = 19/466 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQEL--NICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
N+ L +G A+ +L SMQ + + LV L+ L + +G +H+
Sbjct: 80 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 139
Query: 122 SKTMSHLS----------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+ H + V LG A L M+ K G L +A VF M R+ +W+ LIGG+
Sbjct: 140 IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGF 199
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+A L++ M G + LR C + L+ G+++H + + G AD
Sbjct: 200 VLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD 259
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ N+L++MY K G + +A +FD M +D +S++A++SGY +NG + ++F M+
Sbjct: 260 LTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+PD T+ S+I A + + GR HG VI G + + S+CN LI MY G +
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF+ M S+D+VSW TMI+ Y L +A + M G PD +T +LSAC+
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 412 LGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWT 469
G + G H + GL + ++D+ S+ +D+A E +P + +V W
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ R+ ++ + +M+ L P N V L +I SA R
Sbjct: 500 ALLGACRV-YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 544
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 259/491 (52%), Gaps = 13/491 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H V+ T ++ + +A ++M+ + G + A F + WN ++ A
Sbjct: 169 QGRSIHYRVA-TGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALA 227
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
AG A+ L+ F + + + L C L+ G ++H + + V
Sbjct: 228 GAGHHRRAIELF---FQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRV 284
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+NALI+MYV+CG L A VF MP R+ +SW +MI+ + G Y + LF M
Sbjct: 285 LVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAE 344
Query: 293 LVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++P+ T +SV+SA +G + + GR++H + G D V N LI MY G
Sbjct: 345 GINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLL 404
Query: 350 EEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
E +VF + SK VVS+TTMIS Y + P +A+E ++ M A G P+EIT A+VL+
Sbjct: 405 AEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC +G+L G +H+ + +GL S A N+L+DMY+KC + A VF + K+++
Sbjct: 465 ACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLV 524
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+WT+II + + AL + +M+ + + P+ TL ++L ACA +G L G++IH A
Sbjct: 525 AWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQA 584
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
LR + D NAL MY +CG ++ A + DV+ W +L ++++G ++A
Sbjct: 585 LRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVAL 644
Query: 585 EFFRKMIDSKG 595
E + +M +S+G
Sbjct: 645 ELYAEM-ESEG 654
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 256/510 (50%), Gaps = 26/510 (5%)
Query: 99 VNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
NL+R C +R D G +H+ +VS+ ++ ++ LG M+ + A +F M
Sbjct: 54 ANLLRQCGNQRALDHGRRVHAHIVSRRLARNAL-LGELVFQMYARCRCFDTAIALFDAMP 112
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DR F WNVL+ + A + L LY+RM V +P F + CG + DL +G+
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMS-VENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H V G + + +AL+TMY +CG + A FD + WNA++S G
Sbjct: 172 SIHYRVA-TGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 278 EYMKGLMLFIMMREVLVD--PDFMTLSSVISASELVG----DEKLGREVHGYVIKMGFSD 331
+ + + LF M + + L + +A L G +K+ E+HG
Sbjct: 231 HHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHG--------T 282
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V V N LI MY+ G +E +VF+ M ++VVSWT+MI+ + +V+ + M
Sbjct: 283 RVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMI 342
Query: 392 AEGSMPDEITIASVLSACACLGN---LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
AEG P+E T ASV+SA A LG LD G K+H +G+ + I+ N+LI+MY++
Sbjct: 343 AEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSG 402
Query: 449 CIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
+ +A EVF I + K V+S+T++I N +AL FR+M + PN +T ++
Sbjct: 403 LLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATV 462
Query: 506 LSACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
L+AC IG L G IH + G+ + D F N+L+DMY +CG + A F + +D
Sbjct: 463 LAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKD 522
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ AW ++ + G A + + +M+ S
Sbjct: 523 LVAWTTIIAANVQSGNNRAALDLYDRMLQS 552
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 238/469 (50%), Gaps = 11/469 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H + + V + NA +SM+V+ G L A VF M R++ SW +I A+
Sbjct: 268 GIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQ 327
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA 230
G + ++ L+ M G+ P+ T+ V+ G L RG+++H + G +A
Sbjct: 328 TGHYSFSVKLFDGMI-AEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA 386
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIM 288
D V N+LI MY + G L AR VFD + + + +S+ MIS Y NG + L +F
Sbjct: 387 DPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFRE 446
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFG 347
M V P+ +T ++V++A +GD G +H +I+ G S D N L+ MY G
Sbjct: 447 MTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCG 506
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +VF M++KD+V+WTT+I+ S A++ Y M G PD T++++L
Sbjct: 507 DLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLV 566
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
ACA LG+L +G K+H+ A+R+ L N L MY+KC ++KA ++ + +V +
Sbjct: 567 ACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVAT 626
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHA 525
WTS++ + AL + +M ++PN VT + +L +C++ G + G+E H+
Sbjct: 627 WTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSIT 686
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLT 572
G ++D+ R G+++ A +S D AW LL+
Sbjct: 687 SDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLS 735
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 199/411 (48%), Gaps = 15/411 (3%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIG 169
D G +HS ++ + + N+ ++M+ + G L A VF + + + + S+ +I
Sbjct: 370 DRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIS 429
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
YA G +AL +++ M GV P+ TF VL C + DL G +H +I G +
Sbjct: 430 AYAHNGHPRQALEIFREMT-ARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLD 488
Query: 230 A-DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ D N+L+ MY KCGDL A VF+ M +D ++W +I+ ++G L L+
Sbjct: 489 SSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDR 548
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M + + PD TLS+++ A +GD +G ++H ++ D N L MY G+
Sbjct: 549 MLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGS 608
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E+ +++ R DV +WT+M++ + L A+E Y ME+EG P+E+T VL +
Sbjct: 609 LEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLIS 668
Query: 409 CACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
C+ G + G + H + G ++D+ + + A E+ +P + I
Sbjct: 669 CSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEI 728
Query: 467 SWTSIILGLRLNNRSFEALIFFR--KMMLNLKPNS----VTLVSILSACAR 511
+W S++ +L+ +A I R + +L L P S V L I +A R
Sbjct: 729 AWQSLLSSCKLHT---DAEIGTRAAECLLELDPESTSQFVALSQIYAAAGR 776
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
L +R +AL+ K+ + ++L C AL G+ +HAH + +A + L
Sbjct: 28 LISRLDDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALL 87
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY--AERGQGALAEEFFRKM 590
+ MY RC A F++ +R WN+L+ + A+R + L E +R+M
Sbjct: 88 GELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTL--ELYRRM 142
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 235/466 (50%), Gaps = 12/466 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + K+ V +G A + MFVK + +A VF +M +RD +WN ++ G+ ++G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+A SL++ M + + PD T ++++ LK + +H IR G + V V N
Sbjct: 134 TDKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
I+ Y KCGDL A+LVF+ + + DR +SWN+M Y GE L+ +M
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T ++ ++ + GR +H + I +G D+ N I MY +
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M S+ VSWT MIS Y D+A+ + M G PD +T+ S++S C G+
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 415 LDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G + A G ++I N LIDMYSKC I +A ++F P+K V++WT++I
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIG 529
G LN EAL F KM+ L+ KPN +T +++L ACA G+L G E I I
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTG 573
D + + ++D+ R G+++ A S + D W LL
Sbjct: 493 PGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 225/452 (49%), Gaps = 8/452 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+WN+ I E+L L++ M GG +P+ +TFP V + C + D+ + VH H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I+ + +DV V A + M+VKC + A VF+ MP+RD +WNAM+SG+ ++G K
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
LF MR + PD +T+ ++I ++ KL +H I++G V+V N I
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 343 YLSFGNREEGEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y G+ + + VF ++ D VVSW +M Y A Y +M E PD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T ++ ++C L G +H A+ G I NT I MYSK + A +F +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
+ +SWT +I G EAL F M+ + KP+ VTL+S++S C + G+L GK
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 520 EIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAER 577
I A A G D + NAL+DMY +CG + A + F N+ E+ V W ++ GYA
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 578 GQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
G A + F KMI D K N + + + C
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 469
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C +G ++A M+ I D ++ L++ +++ +H+V +
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEAL 181
+ V + N ++S + K GDL A VF + DR + SWN + Y+ G +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY M KPD+ TF + +C L +G+ +H H I G + D++ +N I+M
Sbjct: 242 GLYCLML-REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K D ARL+FD M R +SW MISGY E G+ + L LF M + PD +TL
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+IS G + G+ + G D+V +CN LI MY G+ E +F
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K VV+WTTMI+ Y + + +A++ + M P+ IT +VL ACA G+L+ G +
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Query: 421 LHQLAMRT-----GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + GL Y + ++D+ + +++ALE+ + PD + W +++
Sbjct: 481 YFHIMKQVYNISPGLDHY----SCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALL 534
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSAC------ARIGALMCGKEI 521
++ +R+ + + + NL+P V + +I +A ARI ++M + I
Sbjct: 535 NACKI-HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
>gi|255540507|ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550433|gb|EEF51920.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 221/393 (56%), Gaps = 5/393 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFL---SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+H+ + KT HL + L ++ + + +A +F + D ++N++I +
Sbjct: 44 VHAHLLKTRRHLDSTVTENLLESAAIILPATTMEYALSIFDNIDGPDSSAYNIMIRAFTL 103
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+AL+ +++M V D +TFPC L+ C + K GK++H ++++G+ ++
Sbjct: 104 KRSPQKALAFFKQML-EEAVAFDEFTFPCTLKACSRLRGRKEGKQIHAQIVKYGFGSNCI 162
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V+N LI MY CG++ AR +FDGM +RD +WN+M SGY ++G Y + LF MRE+
Sbjct: 163 VLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMRELG 222
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V + +TL SV++A + D +LG + YV G ++++ L+ MY G ++
Sbjct: 223 VGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKAR 282
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++F +M+ +DVV+W+ MIS Y + +AV+ + M+ P+E+T+ SVLS CA LG
Sbjct: 283 RLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPNEVTMVSVLSCCAALG 342
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G +H R G+ + + L+D Y KC +D A+EVF +P KNV SWT++I
Sbjct: 343 ALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQ 402
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
GL N + AL +++ M N++PN V L+ +
Sbjct: 403 GLANNGQGKRALEYYQLMRESNVEPNDVWLMKV 435
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 201/396 (50%), Gaps = 8/396 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI---TMYVKCGDLVRARLVFDGMP 259
+L+ C + DLK +VH H+++ D V L+ + + + A +FD +
Sbjct: 31 ILQQCKTIKDLK---QVHAHLLKTRRHLDSTVTENLLESAAIILPATTMEYALSIFDNID 87
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D ++N MI + K L F M E V D T + A + K G++
Sbjct: 88 GPDSSAYNIMIRAFTLKRSPQKALAFFKQMLEEAVAFDEFTFPCTLKACSRLRGRKEGKQ 147
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H ++K GF + V N LI MY + G E +F M +D+ +W +M S Y S
Sbjct: 148 IHAQIVKYGFGSNCIVLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKSGY 207
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+ V ++ M G ++IT+ SVL+AC L +++LG + + GL + +
Sbjct: 208 YEDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLDRNMNLVTA 267
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPN 498
L+DMY+KC +DKA +F Q+ ++V++W+++I G R EA+ F +M M NL PN
Sbjct: 268 LVDMYAKCGEVDKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPN 327
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
VT+VS+LS CA +GAL GK IH + R G+ L AL+D Y +CG + A F
Sbjct: 328 EVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQ 387
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++V +W L+ G A GQG A E+++ M +S
Sbjct: 388 LMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRES 423
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +G E ++ + M+EL + ++ L++++ C + G ++ V
Sbjct: 196 NSMFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWIAKYVRV 255
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ L A + M+ K G++ A +F +M RD+ +W+ +I GY++A EA+ L
Sbjct: 256 NGLDRNMNLVTALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDL 315
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + + P+ T VL C + L GK +H+++ R G V + AL+ Y
Sbjct: 316 FNEM-QMANLDPNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVTLGTALVDFYG 374
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
KCG + A VF MP ++ SW A+I G NG+ + L + +MRE V+P+
Sbjct: 375 KCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRESNVEPN 428
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 276/537 (51%), Gaps = 16/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L + N S + + ++ ++ D L +++ C G+ +H K
Sbjct: 65 NHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLSCKKFGIQVHDYCVK 124
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +G + + M++K + VF +M +R++ SW L+ GYA G EAL
Sbjct: 125 SGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALEC 184
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK----RGKEVHVHVIRFGYEADVDVVNALI 239
+ M G +KP+ +TF VL G + D K +G ++H VI+ G+EA + V N+LI
Sbjct: 185 FFEM-QAGAIKPNPFTFATVL---GALADSKAIADKGVQIHTMVIKNGFEATIFVCNSLI 240
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY K G + A+ VFD M RD ISWN+M++GY NG Y++ + +F +R V
Sbjct: 241 NMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNF 300
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SSVI + + + R++HG V+K GF D ++ L+ Y ++ K+FS M
Sbjct: 301 IFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMM 360
Query: 360 ES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
++VVSWT +IS + + L ++AV + M EG P++ T +++L+A + +
Sbjct: 361 YGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPFE-- 418
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+H +++ + L+D Y K +++A +VF +I DK++++W++++ G
Sbjct: 419 --VHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQT 476
Query: 479 NRSFEAL-IFFRKMMLNLKPNSVTLVSILSAC-ARIGALMCGKEIHAHALRIGVAFDGFL 536
+ A+ I + ++PN T S+++AC A A+ GK+ HA +++ +
Sbjct: 477 GDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCV 536
Query: 537 PNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+AL+ MY + G ++ A F RD+ +WN +++GYA+ G A E F++M D
Sbjct: 537 SSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQD 593
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 227/413 (54%), Gaps = 8/413 (1%)
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
L + K D+G+ +H++V K ++ + N+ ++M+ K G + +A VF M RD S
Sbjct: 207 LADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAIS 266
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN ++ GY G + EA+ ++ + + GVK + F V+++C + +L +++H V
Sbjct: 267 WNSMVAGYVANGLYLEAIEMFYHL-RLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQV 325
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKG 282
++ G+E D ++ AL+ Y K ++ A +F M R+ +SW A+ISG+ +NG +
Sbjct: 326 LKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQA 385
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ LF M V P+ T S++++A +V EVH VIK + SV L+
Sbjct: 386 VNLFCEMSREGVRPNDYTFSTILAAQPVVSP----FEVHAQVIKSDYEKSPSVGTALLDA 441
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y+ GN E KVF R++ KD+V+W+ M++ Y + + AV+ M +G P+E T
Sbjct: 442 YVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTF 501
Query: 403 ASVLSAC-ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+SV++AC A ++ G + H ++++ + +++ L+ MY+K I+ A EVF +
Sbjct: 502 SSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQG 561
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
++++SW S++ G + + +AL F++M NL+ + VT + ++SAC G
Sbjct: 562 VRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGVISACTHAG 614
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 183/344 (53%), Gaps = 4/344 (1%)
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+ VFD PK+D + N ++ Y N + + + LF+ + + D TLS V+ A
Sbjct: 49 AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ +K G +VH Y +K GF +D+SV L+ MY+ EEG++VF ME ++VVSWT++
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSL 168
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRTG 429
+ Y + L +A+E + M+A P+ T A+VL A A + D G+++H + ++ G
Sbjct: 169 LVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNG 228
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFF 488
+ I + N+LI+MYSK + A VF + ++ ISW S++ G N EA+ +F+
Sbjct: 229 FEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFY 288
Query: 489 RKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ +K + S++ +CA I L +++H L+ G +D + AL+ Y +
Sbjct: 289 HLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGR 348
Query: 549 RMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A+ F+ R+V +W +++G+ + G A F +M
Sbjct: 349 EIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEM 392
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAG 175
LH V K + A + + K ++ A+ +F M R++ SW +I G+ + G
Sbjct: 321 LHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNG 380
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
++A++L+ M GV+P+ YTF +L V EVH VI+ YE V
Sbjct: 381 LAEQAVNLFCEMSR-EGVRPNDYTFSTILAAQPVVSPF----EVHAQVIKSDYEKSPSVG 435
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
AL+ YVK G+L A VF+ + +D ++W+AM++GY + G+ + + I M + V+
Sbjct: 436 TALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVE 495
Query: 296 PDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P+ T SSVI+A + + G++ H + IK F+D + V + L+ MY G E +
Sbjct: 496 PNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIESANE 555
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF R +D+VSW +M+S Y KA+E ++ M+ + D +T V+SAC G
Sbjct: 556 VFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGVISACTHAGL 615
Query: 415 LD 416
+D
Sbjct: 616 VD 617
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 251/465 (53%), Gaps = 15/465 (3%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
+A+ +L+ C + + GL LH+ KT + + N ++++ K G++ A +F +
Sbjct: 4 EAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDE 63
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M DR+L SW+ +I GY + G AL+L+ +M V P+ Y F V+ C + L +
Sbjct: 64 MSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIV----PNEYVFASVISACASLTALSQ 119
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +VH ++ G + V NALI+MY+KCG A LV + M + + +S+NA+I+G+ E
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
N + KG+ F +MR+ PD T S ++ D G ++H +IK+ D +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ-MMEAEG 394
N +I MY F EE EKVF ++ KD++SW T+++ ++A+ ++ M++
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCF 299
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD+ T A VL+ACA L ++ G ++H +RT + ++N L++MY+KC I +
Sbjct: 300 VKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSY 359
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG 513
+VF + D+N++SW +II + AL F KM + + P+SVT V +L+AC G
Sbjct: 360 DVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAG 419
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPA 553
+ G +++ +++ G PN L+D+ R GR++ A
Sbjct: 420 LVEEG-QVYFNSMEEAY---GIFPNIEHFSCLIDLLGRAGRLQEA 460
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 210/391 (53%), Gaps = 6/391 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L C + G +H ++ G +D+ V N +I +Y KCG+++ AR +FD M R+
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW+A+ISGY + G+ + L LF MR V P+ +SVISA + G +VH
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVHA 125
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+K+G V N LI MY+ G + V + M + VS+ +I+ + + P+K
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+E +++M +G PD T + +L C + G++LH ++ L I N +I
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSV 500
MYSK I++A +VF I +K++ISW +++ AL FR M+ +KP+
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDF 305
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NS 559
T +L+ACA + ++ GK+IH H +R D + NAL++MY +CG +K +++ F +
Sbjct: 306 TFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRT 365
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++R++ +WN ++ + G GA A E F KM
Sbjct: 366 SDRNLVSWNTIIAAFGNHGLGARALEHFEKM 396
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 167/375 (44%), Gaps = 48/375 (12%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N E+ ++ M++ D L+ +C + G+ LH + K S +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN ++M+ KF + A VFG + ++DL SWN L+ + AL +++ M V
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCF 299
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD +TF VL C G+ ++ GK++H H+IR DV V NAL+ MY KCG + +
Sbjct: 300 VKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSY 359
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF R+ +SWN +I+ + +G + L F M+ V + PD +T +++A
Sbjct: 360 DVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTA----- 414
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
CN G EEG+ F+ ME ++ +
Sbjct: 415 -----------------------CNHA-------GLVEEGQVYFNSMEE----AYGIFPN 440
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMP------DEITIASVLSACACLGNLDLGIKLHQLAM 426
S L D ++ EAE M D I + S+LSAC G++ +G L +
Sbjct: 441 IEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLL 500
Query: 427 RTGLIS---YIIIAN 438
+ ++ Y++++N
Sbjct: 501 KLQPVTTSPYVLLSN 515
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NER 562
S+L CA+I A + G +HA AL+ G+ D + N ++++Y +CG + A F+ ++R
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM 590
++ +W+ +++GY + GQ LA F +M
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQM 95
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 246/495 (49%), Gaps = 42/495 (8%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F + F L +A VF + + +L WN + G+A + AL LY M +G + P
Sbjct: 28 FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LLP 86
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ YTFP +L++C + G+++H HV++ GY+ D+ V +LI+MYV+ G L AR VF
Sbjct: 87 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 146
Query: 256 DG-------------------------------MPKRDRISWNAMISGYFENGEYMKGLM 284
D +P +D +SWNAMISGY E G Y + L
Sbjct: 147 DQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 206
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M + V PD T+ +V+SA G +LGR+VH ++ GF ++ + N LI +Y
Sbjct: 207 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 266
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E +F + KDV+SW T+I Y L +A+ +Q M G P+++T+ S
Sbjct: 267 KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 326
Query: 405 VLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+L ACA LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF +
Sbjct: 327 ILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLT 386
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+++ SW ++I G ++ ++ A F KM N + P+ +T V +LSAC+ G L G+ I
Sbjct: 387 RSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 446
Query: 522 H---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAE 576
+ +I + + ++D+ CG K A + E D W LL
Sbjct: 447 FRSMSQDYKITPKLEHY--GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKM 504
Query: 577 RGQGALAEEFFRKMI 591
L E + + +I
Sbjct: 505 HNNVELGESYAQNLI 519
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 200/414 (48%), Gaps = 36/414 (8%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + + EG +H V K L + + + +SM+V+ G L A VF + RD
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 161 LFSWNVLIGGYAKAGF-------------------------------FDEALSLYQRMFW 189
+ S+ LI GYA G+ + EAL L++ M
Sbjct: 154 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 213
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V+PD T V+ C ++ G++VH+ + G+ +++ +VNALI +Y KCG++
Sbjct: 214 T-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVE 272
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+G+ +D ISWN +I GY Y + L+LF M P+ +T+ S++ A
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332
Query: 310 LVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G +GR +H Y+ K G ++ S+ LI MY G+ E ++VF M ++ + SW
Sbjct: 333 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 392
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAM 426
MI + + A + + M G PD+IT +LSAC+ G LDLG + + ++
Sbjct: 393 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 452
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ + +ID+ C +A E+ +P + + + W S++ +++N
Sbjct: 453 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN 506
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V +V C + G +H +
Sbjct: 189 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 248
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G++ A +F + +D+ SWN LIGGY + EAL L
Sbjct: 249 HGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 308
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G DV T +L C + + G+ +HV++ + G ++ +LI M
Sbjct: 309 FQEMLRSGESPNDV-TMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDM 367
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A+ VFD M R SWNAMI G+ +G+ LF MR+ +DPD +T
Sbjct: 368 YAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 427
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + + K+ ++E
Sbjct: 428 VGLLSACSHSGMLDLGRHI-------------------------FRSMSQDYKITPKLE- 461
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ MI L +A E + M E PD + S+L AC N++LG
Sbjct: 462 ----HYGCMIDLLGHCGLFKEAKEMIRTMPME---PDGVIWCSLLKACKMHNNVELG 511
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 36/312 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + LI+ + F VF ++ +++ W TM +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH----------QL 424
S P A+ Y M + G +P+ T +L +CA G ++H L
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 425 AMRTGLISY---------------------IIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ T LIS ++ LI Y+ I+ A ++F +IP K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 183
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW ++I G EAL F+ MM N++P+ T+V+++SACA+ G++ G+++H
Sbjct: 184 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 243
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
G + + NAL+D+Y +CG ++ A F + +DV +WN L+ GY
Sbjct: 244 LWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303
Query: 582 LAEEFFRKMIDS 593
A F++M+ S
Sbjct: 304 EALLLFQEMLRS 315
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 257/487 (52%), Gaps = 12/487 (2%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ + ++++SH S + +S++ L A VF + + +W +I +
Sbjct: 27 LHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQ 83
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
F AL+ + M G PD FP VL++C + DL+ G+ VH ++R G + D+
Sbjct: 84 SLFSRALASFVEM-RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NAL+ MY K + R VF+ MP++D +S+N +I+GY ++G Y L + M +
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD TLSSV+ D G+E+HGYVI+ G DV + + L+ MY E+ E+
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 262
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VFS + +D +SW ++++ Y + ++A+ ++ M + P + +SV+ ACA L
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L LG +LH +R G I IA+ L+DMYSKC I A ++F ++ + +SWT+II+G
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
L+ EA+ F +M +KPN V V++L+AC+ +G L+ + +++ +
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG-LVDEAWGYFNSMTKVYGLN 441
Query: 534 GFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRK 589
L + A+ D+ R G+++ A++ + E S W+ LL+ + LAE+ K
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501
Query: 590 M--IDSK 594
+ IDS+
Sbjct: 502 IFTIDSE 508
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 183/341 (53%), Gaps = 1/341 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+AL M+ C D + ++++ C G +H + + + GNA
Sbjct: 86 FSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++M+ K + VF M +D+ S+N +I GYA++G +++AL + + M +KP
Sbjct: 146 LMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREM-GTSDLKP 204
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +T VL D+ +GKE+H +VIR G ++DV + ++L+ MY K + + VF
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 264
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ +RD ISWN++++GY +NG Y + L LF M V P + SSVI A +
Sbjct: 265 SHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLH 324
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG+++HGYV++ GF ++ + + L+ MY GN + K+F RM D VSWT +I +
Sbjct: 325 LGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHA 384
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+AV ++ M+ +G P+++ +VL+AC+ +G +D
Sbjct: 385 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +AL+ M + A +++ C G LH V +
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ + +A + M+ K G++ A +F +M D SW +I G+A G EA+SL
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGV 210
++ M GVKP+ F VL C V
Sbjct: 396 FEEM-KRQGVKPNQVAFVAVLTACSHV 421
>gi|255542118|ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549303|gb|EEF50792.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 456
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 218/391 (55%), Gaps = 5/391 (1%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
+R C + D+ G+++H +I+ G D V+ L Y KCG++ +R FD R+
Sbjct: 11 IRACSELRDIDEGRKLHCQIIKAG-PPDSFVLTGLTDFYAKCGEIECSRCAFDENLDRNV 69
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
+SW +MI GY +N ++GL+LF MRE L++ + TL +++A +G G+ HGY
Sbjct: 70 VSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGY 129
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
IK G + + L+ MY+ G + VF + S D+VSWT MI Y S L A
Sbjct: 130 AIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDA 189
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ + + G +P+++TI S L+ACA +GNL+LG +H LA++ G ++ N L+ M
Sbjct: 190 LKLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFAEPTLM-NALVHM 248
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTL 502
Y+KC A +F +K+V+SW SII G +EAL F++M ++ P++VTL
Sbjct: 249 YAKCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTL 308
Query: 503 VSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
VS+ SACA +GAL G +HA++++ G ++ + ++ ALL Y +CG A F+
Sbjct: 309 VSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQ 368
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
E++ W+ ++ GY +G + F M+
Sbjct: 369 EKNTVTWSAMIGGYGVQGDAGGSLSIFNDML 399
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 219/417 (52%), Gaps = 5/417 (1%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
++ +R C R DEG LH + K S L + K G++ + F + D
Sbjct: 8 LDFIRACSELRDIDEGRKLHCQIIKAGPPDSFVL-TGLTDFYAKCGEIECSRCAFDENLD 66
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R++ SW +I GY + E L L+ RM G ++ + +T ++ C + L +GK
Sbjct: 67 RNVVSWTSMIVGYVQNDCPVEGLILFNRM-REGLIEGNQFTLGILVTACTKLGALHQGKC 125
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + I+ G + + ++ AL+ MYVKCG + AR VFD + D +SW AMI GY ++
Sbjct: 126 FHGYAIKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNL 185
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
L LF+ + + P+ +T+ S ++A +G+ LGR +HG IK+GF++ ++ N
Sbjct: 186 SYDALKLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFAEP-TLMNA 244
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY + +F KDVVSW ++IS P +A++ +Q M E PD
Sbjct: 245 LVHMYAKCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPD 304
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVF 457
+T+ SV SACA LG L +G LH +++ GL+S + ++ L+ Y+KC A +F
Sbjct: 305 AVTLVSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIF 364
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+ +KN ++W+++I G + + +L F M+ LKPN V +ILSAC+ G
Sbjct: 365 DGMQEKNTVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTG 421
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 3/345 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+ L + M+E I ++ L LV C +G H K+ L+ L A L
Sbjct: 87 EGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSGVQLNSYLMTALL 146
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+VK G + A VF ++ DL SW +I GY ++ +AL L+ W G+ P+
Sbjct: 147 DMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWA-GILPND 205
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T L C + +L G+ +H I+ G+ A+ ++NAL+ MY KC A +F+
Sbjct: 206 VTIVSALAACARMGNLNLGRSIHGLAIKLGF-AEPTLMNALVHMYAKCHMNRDASYLFET 264
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++D +SWN++ISG + G + L LF MR+ V PD +TL SV SA +G ++G
Sbjct: 265 ASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVG 324
Query: 318 REVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+H Y +K G S +V V L+ Y G+ +F M+ K+ V+W+ MI Y
Sbjct: 325 SSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYGV 384
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
++ + M + P+E+ ++LSAC+ G + G L
Sbjct: 385 QGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEGWNL 429
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 268/532 (50%), Gaps = 65/532 (12%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
++H +V N L+ + K G L A +FG+M RD+ SWN L+ GY ++ + +L +
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G P+ +T C +++CG + ++ V +F + D +V AL+ M+V+
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 245 CGDL-VRARL------------------------------VFDGMPKRDRISWNAMISGY 273
CG + + +RL +FD MP+RD +SWN M+S
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++G + L + + M+ V D T +S ++A + + G+++H VI+ D
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+++Y G +E + VF+ + ++ V+WT +IS + ++VE + M AE
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D+ +A+++S C +L LG +LH L +++G I ++++N+LI MY+KC + A
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 454 LEVFHQIPDKNVISWTSII------------------------------LGLRLNNRSFE 483
+F + +K+++SWTS+I LG + + + E
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 485
Query: 484 ALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ K+ML+ ++P+ VT V++ CA +GA G +I +++G+ D + NA+
Sbjct: 486 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 545
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ MY +CGR+ A F+ N +D+ +WN ++TGY++ G G A E F ++
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 238/489 (48%), Gaps = 41/489 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L+ +VK + HA +F M +RD+ SWN+++ +++G EAL + M GV
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKGV 266
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D T+ L C + L+ GK++H VIR D V +AL+ +Y K G A+
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + R+ ++W +ISG+ + G + + + LF MR L+ D L+++IS D
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR++H +K G V V N LI MY N + E +F M KD+VSWT+MI+
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446
Query: 374 YE--GSV---------LPDKAVETYQ---------------------MMEAEGSMPDEIT 401
Y G+V + +K V T+ M+ E PD +T
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ CA LG LG ++ ++ GLI +AN +I MYSKC I +A +VF +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK- 519
K+++SW ++I G + +A+ F ++ KP+ ++ V++LS C+ G + GK
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 626
Query: 520 --EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYA 575
++ A I + F + ++D+ R G + A + + +A W LL+
Sbjct: 627 YFDMMKRAHNISPGLEHF--SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACK 684
Query: 576 ERGQGALAE 584
G LAE
Sbjct: 685 IHGNNELAE 693
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 204/433 (47%), Gaps = 34/433 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ L +G + +AL + MQ + +D + + C G LH+ V +
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ H+ + +A + ++ K G A VF + DR+ +W VLI G+ + G F E++ L
Sbjct: 299 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVEL 358
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + D + ++ C DL G+++H ++ G V V N+LI+MY
Sbjct: 359 FNQMR-AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 244 KC-------------------------------GDLVRARLVFDGMPKRDRISWNAMISG 272
KC G++ +AR FDGM +++ I+WNAM+
Sbjct: 418 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 477
Query: 273 YFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y ++G GL ++ +M+ E V PD++T ++ +G KLG ++ G +K+G
Sbjct: 478 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 537
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D SV N +I MY G E KVF + KD+VSW MI+ Y + +A+E + +
Sbjct: 538 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 597
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCI 450
G+ PD I+ +VLS C+ G + G + R IS + + ++D+ + +
Sbjct: 598 KRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHL 657
Query: 451 DKALEVFHQIPDK 463
+A ++ +P K
Sbjct: 658 TEAKDLIDDMPMK 670
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 199/434 (45%), Gaps = 41/434 (9%)
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+CG + D +R + + +V N ++ Y K G L A +F MP RD S
Sbjct: 51 SCGALSDARRLLLMDI------AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVAS 104
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WN ++SGYF++ +Y+ L F+ M R P+ TL+ + + +G L ++ V
Sbjct: 105 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMV 164
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------------------- 358
K DD V L+ M++ G + ++F R
Sbjct: 165 QKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL 224
Query: 359 -----MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
M +DVVSW M+S S +A++ M+++G D T S L+ACA L
Sbjct: 225 ELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L G +LH +R +A+ L+++Y+K C +A VF+ + D+N ++WT +I
Sbjct: 285 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLIS 344
Query: 474 GLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G E++ F +M L + L +++S C L G+++H+ L+ G
Sbjct: 345 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQ 404
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ N+L+ MY +C ++ A F NE+D+ +W ++T Y++ G A A EFF M
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 464
Query: 592 DSKG-NWRKLMGLF 604
+ W ++G +
Sbjct: 465 EKNVITWNAMLGAY 478
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAERGQ 579
H + +G+A FL N LL Y+ CG + A + +V N++L GYA+ G+
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 580 GALAEEFFRKM-IDSKGNWRKLM-GLFRKCQ 608
+ A E F +M +W LM G F+ Q
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQ 117
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 230/432 (53%), Gaps = 4/432 (0%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
+NVL+ AG ++AL L+ M V V PD +T C L++C + L G+ + +
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
++ G AD V+++LI MY C D+ A+L+FD + + + WNA+I+ Y +NG +M+ +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
+F M EV V D +TL SV++A +GD KLG+ V YV + G + ++ LI MY
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G + ++F M+S+DVV+W+ MIS Y + +A+ + M+ P+++T+
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVLSACA LG L+ G +H R L II+ L+D Y+KC CID A+E F +P K
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-KEI 521
N +WT++I G+ N R EAL F M +++P VT + +L AC+ + G +
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ 579
+ G+ ++D+ R G + A+ + E + W LL+ A
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKN 505
Query: 580 GALAEEFFRKMI 591
+ EE ++++
Sbjct: 506 VEIGEEALKQIV 517
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 205/422 (48%), Gaps = 12/422 (2%)
Query: 58 IATKNPNSRLNELCLNGSLEQALK-YLDSMQELNICVDED----ALVNLVRLCEWKRGYD 112
++T N + L G E AL +++ + ++C D+ AL + R+C G
Sbjct: 81 LSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG-- 138
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G+ ++V M+ V ++ + M+ D+ A +F + + + WN +I Y
Sbjct: 139 RGIQAYAVKRGLMADRFVL--SSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYM 196
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
K G + E + +++ M V GV D T V+ CG + D K GK V +V G +
Sbjct: 197 KNGNWMEVVEMFKGMLEV-GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNR 255
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+++ ALI MY KCG+L +AR +FDGM RD ++W+AMISGY + + + L LF M+
Sbjct: 256 NLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLA 315
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V+P+ +T+ SV+SA ++G + G+ VH Y+ + S + + L+ Y G ++
Sbjct: 316 EVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDA 375
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+ F M K+ +WT +I + +A+E + M P ++T VL AC+
Sbjct: 376 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHS 435
Query: 413 GNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTS 470
++ G + + G+ ++D+ + ID+A + +P + N + W +
Sbjct: 436 CLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRA 495
Query: 471 II 472
++
Sbjct: 496 LL 497
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 483 EALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+AL F +M+ ++ P+ T+ L +C+R+ L G+ I A+A++ G+ D F+ ++L
Sbjct: 101 DALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSL 160
Query: 541 LDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKMID 592
+ MY C + A F++ E + V WN ++T Y + G E F+ M++
Sbjct: 161 IHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLE 213
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL MQ + ++ +V+++ C + G ++HS + + L++ LG A +
Sbjct: 304 EALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALV 363
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ K G + A F M ++ ++W LI G A G EAL L+ M ++P
Sbjct: 364 DFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMR-KASIEPTD 422
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G+ + + +G + + ++ + + G + A
Sbjct: 423 VTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIR 482
Query: 257 GMP-KRDRISWNAMIS 271
MP + + + W A++S
Sbjct: 483 TMPIEPNAVIWRALLS 498
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 262/535 (48%), Gaps = 8/535 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +L E G + A+ ++ I D LV ++ D G +H++V K
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + N+ ++M+ K G + A F + DL SWN +I YA+ EA+
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVIRFGYEADVDVVNALIT 240
++ + G+KPD +T VLR C + G +VHV+ I+ G D V ALI
Sbjct: 983 FRDLLR-DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y K G + A + G D SWNA++ GY ++ + K L F +M E+ + D +T
Sbjct: 1042 LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT 1101
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L++ I AS + + K G+++ Y IK+GF++D+ V + ++ MY+ G+ ++F +
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D V+WTTMIS Y + D A+ Y +M G PDE T A+++ A +CL L+ G +
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ 1221
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ + +L+DMY KC + A VF ++ + V+ W +++LGL +
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPN 538
EAL FR M N ++P+ VT + +LSAC+ G K A G+ + +
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYS 1341
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMI 591
L+D R GR++ A N S SA + LL +G A+ K++
Sbjct: 1342 CLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 233/472 (49%), Gaps = 41/472 (8%)
Query: 121 VSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
VS+T+ +V++G A ++++ K+G +G A +F KM +RD WNV++ Y
Sbjct: 735 VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYV 794
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV-PDLKRGKEVHVHVIRFGYEAD 231
+ F DEAL + F G PD CV+ GGV D+ ++ H ++
Sbjct: 795 ENSFQDEALRFFS-AFHRSGFXPDFSNLHCVI---GGVNSDVSNNRKRHAEQVK------ 844
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
A +F + +WN ++ + G+ + + F +
Sbjct: 845 -----------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ D +TL ++SA+ D LG ++H VIK F+ V V N L+ MY G
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
EK F D++SW TMIS Y + L +A+ T++ + +G PD+ T+ASVL AC+
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 412 LGN---LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
LG ++H A++ G+I+ ++ LID+YSK +D+A + H D ++ SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067
Query: 469 TSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+I+ G +N+S +AL F M + + + +TL + + A + L GK+I A+A++
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERG 578
+G D ++ + +LDMY++CG M A F R D AW +++GY E G
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENG 1179
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 227/476 (47%), Gaps = 50/476 (10%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++M+ K G L A VF K DRDL +WN ++ YA+ F D + F +
Sbjct: 648 LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ--FADSSYENVLEGFRLF 705
Query: 192 GVKPDVYTFPCVLRTCGGVPD-------LKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
G+ + + F T + ++ + VH + ++ G+E D+ V AL+ +Y K
Sbjct: 706 GLLRE-FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCK 764
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
G + +ARL+FD MP+RD + WN M+ Y EN + L F PDF L V
Sbjct: 765 YGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCV 824
Query: 305 ISA--SELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
I S++ + K +V Y +KM F +
Sbjct: 825 IGGVNSDVSNNRKRHAEQVKAYAMKM----------------------------FPFDQG 856
Query: 362 KDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++ +W ++ + G ++ A++ ++ + D +T+ +LSA +LDLG
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVA--AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H L +++ + ++N+L++MYSK + A + F P+ ++ISW ++I NN
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA---LMCGKEIHAHALRIGVAFDGF 535
EA+ FR ++ + LKP+ TL S+L AC+ G ++H +A++ G+ D F
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AL+D+Y + G+M A + + D+++WN ++ GY + + A E F M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 190/414 (45%), Gaps = 38/414 (9%)
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
R+ + DLK GK H ++ G D + N LITMY KCG L AR VFD RD +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 265 SWNAMISGY--FENGEY---MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+WN++++ Y F + Y ++G LF ++RE +TL+ ++ L G ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VHGY +K+GF D+ V L+ +Y +G + +F +M +D V W M+ Y +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
D+A+ + G PD + V+ N D ++N
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGV----NSD-------------------VSNN 835
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
+ K A+++F N+ +W + + A+ F+ ++ + + +
Sbjct: 836 RKRHAEQVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGRMKPAWNQ 556
SVTLV ILSA L G++I HAL I +F +P N+L++MY + G + A
Sbjct: 894 SVTLVIILSAAVGADDLDLGEQI--HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F NS E D+ +WN +++ YA+ A FR ++ K + L + R C
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 258/512 (50%), Gaps = 14/512 (2%)
Query: 94 DEDALV-----NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
+ED L+ L+++ R + G +HS + K S GN L+++VKF L
Sbjct: 61 NEDTLLFNDWPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDL 120
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF +M R+ +W LI GY + F A S+ M G + +T +L+ C
Sbjct: 121 AQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGE-NFNEHTCTVILQACS 179
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
D G+++H VI+ G++ +V V +LI MY K G A VFD M +D N
Sbjct: 180 SPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNF 239
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MI Y G K + +F + +P T +++IS + G+++ G K G
Sbjct: 240 MILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYG 299
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F + SV N +I MY + G +E E++FS M K+++SWT +IS Y S KAV+ +
Sbjct: 300 FLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFL 359
Query: 389 MMEAE-GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
+ E G D + ++L C+ NL+LG+++H M+ G + +A L+D+Y+KC
Sbjct: 360 GLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKC 419
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMML-NLKPNSVTLVSI 505
+ + A VF + +K + S+ +I+ G L + + +I F ++ L +KP+ VT +
Sbjct: 420 EKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRL 479
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDV 564
LS A +L G+ HA+ ++ G + + N+++ MY +CG ++ A FN N RD
Sbjct: 480 LSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDS 539
Query: 565 SAWNILLTGYAERGQGA----LAEEFFRKMID 592
+WN L++ YA GQ L EE RK D
Sbjct: 540 ISWNALISAYALHGQAQKSLFLFEEMKRKGFD 571
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 225/444 (50%), Gaps = 4/444 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+ + A M + +E +++ C G +H V K+ +V +
Sbjct: 146 DNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFV 205
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + ++M+ K G A VF M +D+ N +I Y +AG +A+ +++ + G
Sbjct: 206 GTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLL-NDG 264
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P YTF ++ TC G ++ GK++ ++G+ ++ V NA+ITMY G A
Sbjct: 265 FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAE 324
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELV 311
+F M +++ ISW A+ISGY +G K + F+ + + L ++ D L++++
Sbjct: 325 RMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDC 384
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ +LG ++HG+V+K+G + DV+V L+ +Y + VF + +K + S+ ++
Sbjct: 385 NNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAIL 444
Query: 372 SCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ + E S + + + + G PD +T + +LS A +L+ G H ++TG
Sbjct: 445 AGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGF 504
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I +AN++I MY+KC I+ A ++F+ + ++ ISW ++I L+ ++ ++L F +
Sbjct: 505 DTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEE 564
Query: 491 MMLN-LKPNSVTLVSILSACARIG 513
M P+ T+++IL AC G
Sbjct: 565 MKRKGFDPDEFTILAILQACTYSG 588
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 213/423 (50%), Gaps = 9/423 (2%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
N++ C G +EG L + K +GNA ++M+ G A +F M
Sbjct: 271 TFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSM 330
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
+++L SW LI GY+++G+ +A+ + + G+ D +L C +L+ G
Sbjct: 331 SEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELG 390
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE- 275
++H V++ G DV+V AL+ +Y KC L AR+VFD + + S+NA+++G+ E
Sbjct: 391 LQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLES 450
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+G+ ++LF +R V PD +T S ++S + GR H Y +K GF ++SV
Sbjct: 451 SGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISV 510
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N +I MY G+ E+ ++F+ M +D +SW +IS Y K++ ++ M+ +G
Sbjct: 511 ANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGF 570
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQL-AMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PDE TI ++L AC G GI L L + G+ + + D+ + + +A+
Sbjct: 571 DPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAM 630
Query: 455 EVFHQIP-DKNVISWTSIILGLRLN-NRSFEALIFFRKMMLNLKP---NSVTLVSILSAC 509
++ + P K+ + W +++ +L+ N +F L K +L+L P S LVS + A
Sbjct: 631 DIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLA--SKHLLDLSPVEAGSYILVSNMYAS 688
Query: 510 ARI 512
++
Sbjct: 689 EKM 691
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG+ VH Y++K G DD N ++ +Y+ F + +KVF RM +++ ++WT++I Y
Sbjct: 85 LGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYL 144
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A M G +E T +L AC+ + LG ++H +++G +
Sbjct: 145 EDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ +LI MY+K D A +VF + K++ +IL +A+ F+ ++ +
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+P T +I+S C + GK++ A + G + + NA++ MY G K A
Sbjct: 265 FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAE 324
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F+S +E+++ +W L++GY+ G G A + F + D G
Sbjct: 325 RMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELG 366
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 251/482 (52%), Gaps = 11/482 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E ++ V + HLSV GN+ + M+ K G++ VF +M DRD+ SWN L+ GY+
Sbjct: 122 EQVHCQCVKCGLVHHLSV--GNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYS 179
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
F D+ L+ M V G +PD YT V+ + G ++H V++ G+E +
Sbjct: 180 WNRFNDQVWELFCLM-QVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETER 238
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V N+LI+M K G L AR+VFD M +D +SWN+MI+G+ NG+ ++ F M+
Sbjct: 239 LVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLA 298
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P T +SVI + + + L R +H +K G S + +V L+ ++
Sbjct: 299 GAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDA 358
Query: 353 EKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+FS M + VVSWT MIS Y + D+AV + +M EG P+ T +++L+
Sbjct: 359 FSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHA 418
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ ++H ++T + L+D + K I A++VF I K+VI+W+++
Sbjct: 419 V----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAM 474
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC-ARIGALMCGKEIHAHALRIG 529
+ G + EA F ++ +KPN T SI++AC A ++ GK+ HA+A+++
Sbjct: 475 LAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLR 534
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + ++L+ +Y + G ++ A F ERD+ +WN +++GYA+ GQ A E F
Sbjct: 535 LNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFE 594
Query: 589 KM 590
+M
Sbjct: 595 EM 596
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 233/445 (52%), Gaps = 8/445 (1%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F + RDL N L+ Y++ EAL L+ ++ G+ PD YT CVL C
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYR-SGLSPDSYTMSCVLSVCA 113
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
G + G++VH ++ G + V N+L+ MY K G++ R VFD M RD +SWN+
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
+++GY N + LF +M+ PD+ T+S+VI+A G +G ++H V+K+G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
F + VCN LI M G + VF ME+KD VSW +MI+ + + +A ET+
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ G+ P T ASV+ +CA L L L LH +++GL + + L+ +KCK
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 449 CIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
ID A +F + ++V+SWT++I G N + +A+ F M +KPN T +IL
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVS 565
+ + + EIHA ++ + ALLD +V+ G + A F E +DV
Sbjct: 414 T----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
AW+ +L GYA+ G+ A + F ++
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQL 494
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 245/468 (52%), Gaps = 15/468 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H++V K + N+ +SM K G L A VF M ++D SWN +I G+
Sbjct: 222 GMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVI 281
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA + M + G KP TF V+++C + +L + +H ++ G + +
Sbjct: 282 NGQDLEAFETFNNM-QLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQN 340
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+ AL+ KC ++ A +F M + +SW AMISGY +NG+ + + LF +MR
Sbjct: 341 VLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE 400
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V P+ T S++++ V E+H VIK + SV L+ ++ GN +
Sbjct: 401 GVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDA 456
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC-AC 411
KVF +E+KDV++W+ M++ Y + ++A + + + EG P+E T S+++AC A
Sbjct: 457 VKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAP 516
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+++ G + H A++ L + + ++++L+ +Y+K I+ A E+F + +++++SW S+
Sbjct: 517 TASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSM 576
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHALR 527
I G + ++ +AL F +M NL+ +++T + ++SACA G + G+ I +
Sbjct: 577 ISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHH 636
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTG 573
I + + + ++D+Y R G + A + N +A W I+L
Sbjct: 637 INPTMEHY--SCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 11/460 (2%)
Query: 51 NTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG 110
N +N S++ NS + +NG +A + ++MQ ++++ C +
Sbjct: 263 NMENKDSVSW---NSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIG 169
LH K+ + + A + K ++ A+ +F M + + SW +I
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
GY + G D+A++L+ M GVKP+ +T+ +L V E+H VI+ YE
Sbjct: 380 GYLQNGDTDQAVNLFSLM-RREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYE 434
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V AL+ +VK G++ A VF+ + +D I+W+AM++GY + GE + +F +
Sbjct: 435 KSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQL 494
Query: 290 REVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
+ P+ T S+I+A + + G++ H Y IK+ ++ + V + L+ +Y GN
Sbjct: 495 TREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGN 554
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E ++F R + +D+VSW +MIS Y KA+E ++ M+ D IT V+SA
Sbjct: 555 IESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISA 614
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
CA G + G + + I+ + + +ID+YS+ + KA+++ + +P +
Sbjct: 615 CAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAAT 674
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
I+L +R+ E + +++L+P +LS
Sbjct: 675 VWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLS 714
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 262/529 (49%), Gaps = 36/529 (6%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L +LC R E + S ++ + L N + + K G L A +F +M RD
Sbjct: 65 LFQLCSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQRD 124
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN +I Y + G+ EAL+LY + G +V T +LR+CG V L +++H
Sbjct: 125 GGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEV-TLASILRSCGSVLALHFSRQIH 183
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
H+++ G+ +V + ++L+ +Y KC + AR +FD + R+ +SWN ++ Y E G
Sbjct: 184 GHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGK 243
Query: 281 KGL-MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + M F M RE L+ F +++I+ S + + G ++HG V+K+G ++ + + L
Sbjct: 244 EAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIE-GGQIHGIVVKVGLEENEVISSSL 302
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLP----------------- 380
I MY+ G +VF++ S++++SWT+M+ Y G VL
Sbjct: 303 IDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNVISWN 362
Query: 381 ------------DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++A+E +M + D T+ +L+ C +++ G ++H RT
Sbjct: 363 AMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRT 422
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIF 487
G + + I N L+DMY KC + A F+Q+ ++ +SW +++ + S +A+
Sbjct: 423 GFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTI 482
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
F +M L PN+ T ++L ACA + AL GK+IH +R A D L AL+DMY +C
Sbjct: 483 FSEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKC 542
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+K A F + RDV WN ++ G + LA + F+ M +G
Sbjct: 543 RELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEG 591
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 239/480 (49%), Gaps = 36/480 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +AL + + + E L +++R C +H + K
Sbjct: 129 NAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFSRQIHGHIVK 188
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V L ++ + ++ K + A +F ++ +R+ SWNV++ Y + G EA+S+
Sbjct: 189 CGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVSM 248
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +MF + P +TF L C + L G ++H V++ G E + + ++LI MYV
Sbjct: 249 FFQMF-RESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVISSSLIDMYV 307
Query: 244 KCG-------------------------------DLVRARLVFDGMPKRDRISWNAMISG 272
KCG D+++AR +F+ MP+R+ ISWNAM++G
Sbjct: 308 KCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNVISWNAMLAG 367
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + ++ + L +MR + D D TL +++ D + G++VHG+V + GF +
Sbjct: 368 YIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYAN 427
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+ + N L+ MY GN + + F +M +D VSW +++ + + ++A+ + M+
Sbjct: 428 LYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQ 487
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
E P+ T A++L ACA + L+ G ++H +R I++ L+DMY KC+ +
Sbjct: 488 LETD-PNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELK 546
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSAC 509
AL+VF + ++V+ W SIILG N R A+ F+ M + +KP+ VT IL AC
Sbjct: 547 YALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLAC 606
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 178/328 (54%), Gaps = 11/328 (3%)
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP-DVY 198
+ GD+ A +F +M +R++ SWN ++ GY + ++EAL M +K D
Sbjct: 337 YATSGDVLKARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLM--RSSIKDIDRT 394
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T +L C G D++RGK+VH V R G+ A++ + NAL+ MY KCG+L A++ F M
Sbjct: 395 TLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQM 454
Query: 259 PK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ RD++SWNA+++ + +G + + +F M ++ DP+ T ++++ A + + G
Sbjct: 455 SQWRDKVSWNALLTAHARHGMSEQAMTIFSEM-QLETDPNNFTFATLLGACANMFALEHG 513
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--SCYE 375
+++HG++++ ++ D+ + L+ MY + KVF + S+DVV W ++I C+
Sbjct: 514 KQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIILGCCHN 573
Query: 376 GSVLPDKAVETYQMME-AEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISY 433
+ A++ +Q+M EG PD +T +L AC ++LG K ++ + +I
Sbjct: 574 RRDM--LAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCVIPR 631
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ ++++Y + +D+ + + +P
Sbjct: 632 LEHYECMVELYGQHGNMDELEKFINNMP 659
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 5/286 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL+++ M+ +D L ++ +C + G +H V +T + ++ +GNA
Sbjct: 375 EEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNAL 434
Query: 137 LSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L M+ K G+L A F +M RD SWN L+ +A+ G ++A++++ M P
Sbjct: 435 LDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQL--ETDP 492
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ +TF +L C + L+ GK++H ++R Y D+ + AL+ MY KC +L A VF
Sbjct: 493 NNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVF 552
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDE 314
+ + RD + WN++I G N M + LF +M E + PD +T ++ A
Sbjct: 553 EHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLV 612
Query: 315 KLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+LGR+ + K + ++++Y GN +E EK + M
Sbjct: 613 ELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNM 658
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 247/473 (52%), Gaps = 5/473 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL++H V K ++ L N LS+++K + +A +F +M R +F+W V+I + K
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ F ALSL++ M G P+ +TF V+R+C G+ D+ G VH VI+ G+E +
Sbjct: 102 SQEFASALSLFEEMM-ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ++L +Y KCG A +F + D ISW MIS ++ + L + M +
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T ++ AS +G E G+ +H +I G +V + L+ Y F E+
Sbjct: 221 VPPNEFTFVKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+V + +DV WT+++S + ++ +AV T+ M + G P+ T +++LS C+ +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID-KALEVFHQIPDKNVISWTSII 472
+LD G ++H ++ G + N L+DMY KC + +A VF + NV+SWT++I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
LGL + + +M+ ++PN VTL +L AC+++ + EIHA+ LR V
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALA 583
+ + N+L+D Y ++ AWN S RD + L+T + E G+ +A
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 252/517 (48%), Gaps = 7/517 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL + M +E ++VR C R G +H V KT + +G++
Sbjct: 107 SALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLS 166
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G A +F + + D SW ++I A + EAL Y M GV P+
Sbjct: 167 DLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK-AGVPPNE 225
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TF +L L+ GK +H ++I G +V + +L+ Y + + A V +
Sbjct: 226 FTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++D W +++SG+ N + + F+ MR + + P+ T S+++S V G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE-EGEKVFSRMESKDVVSWTTMI-SCYE 375
+++H IK+GF D V N L+ MY+ E E +VF M S +VVSWTT+I +
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ D +M++ E P+ +T++ VL AC+ L ++ +++H +R + ++
Sbjct: 405 HGFVQDCFGLLMEMVKREVE-PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N+L+D Y+ + +D A V + ++ I++TS++ + AL M +
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ + ++L +SA A +GAL GK +H ++++ G + + N+L+DMY +CG ++ A
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F DV +WN L++G A G + A F +M
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 210/401 (52%), Gaps = 12/401 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H VI+FG ++D+ N L+++Y+K + AR +FD M R +W MIS + +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ E+ L LF M P+ T SSV+ + + D G VHG VIK GF + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+ L +Y G +E ++FS +++ D +SWT MIS G+ +A++ Y M G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+E T +L A + LG L+ G +H + G+ +++ +L+D YS+ ++ A+
Sbjct: 222 PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
V + +++V WTS++ G N R+ EA+ F +M L L+PN+ T +ILS C+ + +
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK-PAWNQFNSN-ERDVSAWNILLT 572
L GK+IH+ +++G + NAL+DMY++C + A F + +V +W L+
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 573 GYAERG-----QGALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
G + G G L E R++ + N L G+ R C
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREV---EPNVVTLSGVLRACS 438
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 225/437 (51%), Gaps = 8/437 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL++ M + + +E V L+ + G + G +HS + L+V L + +
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSF-LGLEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ +F + A V ++D+F W ++ G+ + EA+ + M +G ++P+
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNN 325
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFD 256
+T+ +L C V L GK++H I+ G+E DV NAL+ MY+KC V A VF
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 257 GMPKRDRISWNAMISGYFENGEYMK--GLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
M + +SW +I G ++G GL++ ++ REV +P+ +TLS V+ A +
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV--EPNVVTLSGVLRACSKLRHV 443
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ E+H Y+++ ++ V N L+ Y S + V M+ +D +++T++++ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A+ M +G D++++ +SA A LG L+ G LH ++++G
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ N+L+DMYSKC ++ A +VF +I +V+SW ++ GL N AL F +M M
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 494 NLKPNSVTLVSILSACA 510
+P+SVT + +LSAC+
Sbjct: 624 ETEPDSVTFLILLSACS 640
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 231/521 (44%), Gaps = 39/521 (7%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN 100
SK +V+VLN+ + S ++ N ++A+ M+ L + +
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWT--SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK-FGDLGHAWYVFGKMCDR 159
++ LC R D G +HS K S +GNA + M++K A VFG M
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
++ SW LI G GF + L M V+P+V T VLR C + ++R E+
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVK-REVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H +++R + ++ V N+L+ Y + A V M +RD I++ ++++ + E G++
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKH 509
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
L + M + D ++L ISAS +G + G+ +H Y +K GFS SV N L
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSL 569
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G+ E+ +KVF + + DVVSW ++S + A+ ++ M + + PD
Sbjct: 570 VDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDS 629
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T +LSAC+ DLG++ Q+ + +++
Sbjct: 630 VTFLILLSACSNGRLTDLGLEYFQVMKK----------------------------IYNI 661
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
P V + ++ L R EA M +LKPN++ ++L AC G L G+
Sbjct: 662 EP--QVEHYVHLVGILGRAGRLEEATGVVETM--HLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
++ L + + D L L D+Y G KP Q N
Sbjct: 718 DMANKGLALAPS-DPALYILLADLYDESG--KPELAQKTRN 755
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 150/278 (53%), Gaps = 3/278 (1%)
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++G +H VIK G +++ +CN L+ +YL K+F M + V +WT MIS +
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S A+ ++ M A G+ P+E T +SV+ +CA L ++ G ++H ++TG
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
++ ++L D+YSKC +A E+F + + + ISWT +I L + EAL F+ +M+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ PN T V +L A + +G L GK IH++ + G+ + L +L+D Y + +M+ A
Sbjct: 220 GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
NS+ E+DV W +++G+ + A F +M
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 238/455 (52%), Gaps = 1/455 (0%)
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
F G + H +F K+ DLF +NVLI G++ G ++ LY + ++PD +T
Sbjct: 56 FFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFT 115
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ + + D + G +H H I G +++ V +A++ +Y K AR VFD MP
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+RD + WN MISG+ N + + +F+ M +V + D TL++V++A + + +LG
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+ K G DV V LI +Y G +G +F +++ D++S+ MIS Y +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+ AV ++ + A G + T+ ++ +L L + L+++ G+I ++
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTA 355
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
L +Y + + A ++F + P+K++ SW ++I G N + A+ F++MM L PN
Sbjct: 356 LTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNP 415
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN- 558
VT+ SILSACA++GAL GK +H + + ++ AL+DMY +CG + A F+
Sbjct: 416 VTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDL 475
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+++V WN ++TGY G G A + F +M+ S
Sbjct: 476 MVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 228/444 (51%), Gaps = 12/444 (2%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ HS+V S+L V G+A + ++ KF A VF M +RD WN +I G+++
Sbjct: 135 LHAHSIVDGVASNLFV--GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
+F++++ ++ M V G+ D T VL + + + G + + G +DV V
Sbjct: 193 SYFEDSIRVFVDMLDV-GLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ LI++Y KCG + R++FD + + D IS+NAMISGY N E + LF RE+L
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF---RELLA 308
Query: 295 DPDFM---TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ TL +I +L R + +K+G SV L +Y +
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++F K + SW MIS Y + L D+A+ +Q M + S P+ +T+ S+LSACA
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSACAQ 427
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG L +G +H L L S + ++ L+DMY+KC I +A ++F + DKNV++W ++
Sbjct: 428 LGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIG 529
I G L+ EAL F +M+ + + P VT +SIL AC+ G + G EI H+ A G
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA 553
++D+ R G++ A
Sbjct: 548 FQPMSEHYACMVDILGRAGQLTNA 571
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 203/445 (45%), Gaps = 3/445 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N E +++ M ++ + D L ++ + Y G+ + + SK
Sbjct: 183 NTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK 242
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H V + +S++ K G +F ++ DL S+N +I GY + A++L
Sbjct: 243 KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTL 302
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ + G + + T ++ L+ + + ++ G V AL T+Y
Sbjct: 303 FRELL-ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ ++ AR +FD P++ SWNAMISGY +NG + + LF M L P+ +T++S
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQL-SPNPVTVTS 420
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA +G +G+ VHG + +V V L+ MY G+ E ++F M K+
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VV+W MI+ Y +A++ + M G P +T S+L AC+ G + G ++ H
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+A G ++D+ + + ALE ++P + + +LG + +++
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600
Query: 483 EALIFFRKMMLNLKPNSVTLVSILS 507
E K + L P +V +LS
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLS 625
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/535 (29%), Positives = 261/535 (48%), Gaps = 8/535 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +L E G + A+ ++ I D LV ++ D G +H++V K
Sbjct: 863 NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + N+ ++M+ K G + A F + DL SWN +I YA+ EA+
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICT 982
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ R G+KPD +T VLR C + G +VHV+ I+ G D V ALI
Sbjct: 983 F-RDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y K G + A + G D SWNA++ GY ++ + K L F +M E+ + D +T
Sbjct: 1042 LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT 1101
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L++ I AS + + K G+++ Y IK+GF++D+ V + ++ MY+ G+ ++F +
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D V+WTTMIS Y + D A+ Y +M G PDE T A+++ A +CL L+ G +
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ 1221
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ + +L+DMY KC + A VF ++ + V+ W +++LGL +
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPN 538
EAL FR M N ++P+ VT + +LSAC+ G K A G+ + +
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYS 1341
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMI 591
L+D R GR++ A N S SA + LL +G A+ K++
Sbjct: 1342 CLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 233/472 (49%), Gaps = 41/472 (8%)
Query: 121 VSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
VS+T+ +V++G A ++++ K+G +G A +F KM +RD WNV++ Y
Sbjct: 735 VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYV 794
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV-PDLKRGKEVHVHVIRFGYEAD 231
+ F DEAL + F G PD CV+ GGV D+ ++ H ++
Sbjct: 795 ENSFQDEALRFFS-AFHRSGFFPDFSNLHCVI---GGVNSDVSNNRKRHAEQVK------ 844
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
A +F + +WN ++ + G+ + + F +
Sbjct: 845 -----------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ D +TL ++SA+ D LG ++H VIK F+ V V N L+ MY G
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
EK F D++SW TMIS Y + L +A+ T++ + +G PD+ T+ASVL AC+
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 412 LGN---LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
LG ++H A++ G+I+ ++ LID+YSK +D+A + H D ++ SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067
Query: 469 TSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+I+ G +N+S +AL F M + + + +TL + + A + L GK+I A+A++
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERG 578
+G D ++ + +LDMY++CG M A F R D AW +++GY E G
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENG 1179
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 227/476 (47%), Gaps = 50/476 (10%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++M+ K G L A VF K DRDL +WN ++ YA+ F D + F +
Sbjct: 648 LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ--FADSSYENVLEGFRLF 705
Query: 192 GVKPDVYTFPCVLRTCGGVPD-------LKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
G+ + + F T + ++ + VH + ++ G+E D+ V AL+ +Y K
Sbjct: 706 GLLRE-FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCK 764
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
G + +ARL+FD MP+RD + WN M+ Y EN + L F PDF L V
Sbjct: 765 YGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCV 824
Query: 305 ISA--SELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
I S++ + K +V Y +KM F +
Sbjct: 825 IGGVNSDVSNNRKRHAEQVKAYAMKM----------------------------FPFDQG 856
Query: 362 KDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++ +W ++ + G ++ A++ ++ + D +T+ +LSA +LDLG
Sbjct: 857 SNIFAWNKKLTEFLHAGQIVA--AIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGE 914
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H L +++ + ++N+L++MYSK + A + F P+ ++ISW ++I NN
Sbjct: 915 QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA---LMCGKEIHAHALRIGVAFDGF 535
EA+ FR ++ + LKP+ TL S+L AC+ G ++H +A++ G+ D F
Sbjct: 975 LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ AL+D+Y + G+M A + + D+++WN ++ GY + + A E F M
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 190/414 (45%), Gaps = 38/414 (9%)
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
R+ + DLK GK H ++ G D + N LITMY KCG L AR VFD RD +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 265 SWNAMISGY--FENGEY---MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+WN++++ Y F + Y ++G LF ++RE +TL+ ++ L G ++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VHGY +K+GF D+ V L+ +Y +G + +F +M +D V W M+ Y +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
D+A+ + G PD + V+ N D ++N
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGV----NSD-------------------VSNN 835
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
+ K A+++F N+ +W + + A+ F+ ++ + + +
Sbjct: 836 RKRHAEQVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGRMKPAWNQ 556
SVTLV ILSA L G++I HAL I +F +P N+L++MY + G + A
Sbjct: 894 SVTLVIILSAAVGADDLDLGEQI--HALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT 951
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F NS E D+ +WN +++ YA+ A FR ++ K + L + R C
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
Length = 756
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 254/521 (48%), Gaps = 37/521 (7%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D V L+ C G +H + L + N ++M+ K DL A VF
Sbjct: 127 DRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARRVF 186
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ ++ SW+ L+ YA+ EA+ L+Q M + G+KPD T VL CG +
Sbjct: 187 ESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMD-LEGLKPDRVTLISVLDACGDLRAS 245
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD--GMPKRDRISWNAMIS 271
K+ ++H V+ E DV V NAL++MY K G L +A ++F+ G RD I+WNAMIS
Sbjct: 246 KQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMIS 305
Query: 272 GYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
Y G + + +F IM+ E V P T+S++++A +G GR +H +G
Sbjct: 306 AYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGS---GRRIHCLAASIGVE 362
Query: 331 DDVSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
SV L+ MY + +F ME K +V+W TMI+ L +A E ++
Sbjct: 363 SHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFKA 422
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M+ E PD T AS+L+ C +LDLG +LH L S +I+ L+ MYS+C
Sbjct: 423 MDVE---PDGFTFASLLAVCC---DLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGS 476
Query: 450 IDKALEVFH-------------------QIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ A VF +IPDK+ +SW S+I + R +A+ +R
Sbjct: 477 LGDAAAVFEGMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRA 536
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M + +P+ T+VS L+A + + L G IHA AL +G+A + + L M+ +CG +
Sbjct: 537 M--DCRPDEATIVSALAAASALADLDEGAAIHARALELGIATPA-VESTLASMHAKCGSL 593
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F N E+D+ +WN ++ YA+ G G+ A +M
Sbjct: 594 DAAMALFEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRM 634
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 246/513 (47%), Gaps = 65/513 (12%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF------FDEALS----- 182
N ++M+ K G L A + M D ++FSW +++ YA+ G FD + +
Sbjct: 34 NLLINMYGKCGALEEARKILDGMEDSNVFSWTIMLAAYAQNGLDSAKRVFDLSHAKRDVV 93
Query: 183 ---------------------LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
L+Q+M + G +PD TF +L C DL+RG++VH
Sbjct: 94 SWNSMLSTCSQNEQGIQGTWELFQQMD-LEGFQPDRVTFVTLLDCCASFADLRRGRQVHQ 152
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+ G + V N ++ MY KC DL AR VF+ + +++ ISW+++++ Y +N + +
Sbjct: 153 CAVASGMDLLPTVANCVVNMYGKCDDLEEARRVFESLKRKNEISWSSLVAAYAQNNQATE 212
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M + PD +TL SV+ A + K ++H V++ DV V N L+
Sbjct: 213 AMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEADLERDVVVANALVS 272
Query: 342 MYLSFGNREEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PD 398
MY G E+ +F M +S+DV++W MIS Y + +A +++M E ++ P
Sbjct: 273 MYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHTGHHTRAFGIFRIMLLEAAVTPS 332
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC-KCIDKALEVF 457
TI+++L+AC LG+ G ++H LA G+ S+ +A +L+ MYS+C I A +F
Sbjct: 333 AATISAILAACLDLGS---GRRIHCLAASIGVESHPSVAISLLGMYSRCSSSITSARALF 389
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMC 517
+ K++++W ++I + EA F+ M +++P+ T S+L+ C L
Sbjct: 390 LGMERKSLVAWNTMIAACAQRGLAAEAQELFKAM--DVEPDGFTFASLLAVCCD---LDL 444
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE---------------- 561
G+ +HA +A + AL+ MY RCG + A F E
Sbjct: 445 GRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCGSLGDAKLVFD 504
Query: 562 ----RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+D +WN +++ YA G+ A +R M
Sbjct: 505 RIPDKDAVSWNSMISAYAHHGRYKDAIATYRAM 537
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 233/505 (46%), Gaps = 37/505 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +A+K M + D L++++ C R + +H+ V + V +
Sbjct: 207 NNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEADLERDVVV 266
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
NA +SM+ K G L A +F M + RD+ +WN +I YA G A +++ M
Sbjct: 267 ANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHTGHHTRAFGIFRIMLLE 326
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD-LV 249
V P T +L C DL G+ +H G E+ V +L+ MY +C +
Sbjct: 327 AAVTPSAATISAILAAC---LDLGSGRRIHCLAASIGVESHPSVAISLLGMYSRCSSSIT 383
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR +F GM ++ ++WN MI+ + G + LF M V+PD T +S+++
Sbjct: 384 SARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFKAMD---VEPDGFTFASLLA--- 437
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-------- 361
+ D LGR +H + + + V L+ MY G+ + VF ME
Sbjct: 438 VCCDLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCGSLG 497
Query: 362 -----------KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
KD VSW +MIS Y A+ TY+ M+ PDE TI S L+A +
Sbjct: 498 DAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAMDCR---PDEATIVSALAAAS 554
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L +LD G +H A+ G I+ + +TL M++KC +D A+ +F + +K+++SW +
Sbjct: 555 ALADLDEGAAIHARALELG-IATPAVESTLASMHAKCGSLDAAMALFEKNREKDLVSWNA 613
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK-EIHAHALRI 528
++ + EAL +M L + PN VTL +L++C+ G L G + +
Sbjct: 614 MVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASCSHAGLLERGMFYVGWLSREH 673
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPA 553
GVA + ++++ RCGR+ A
Sbjct: 674 GVAVESEHYRFVVELLGRCGRLGEA 698
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 203/422 (48%), Gaps = 41/422 (9%)
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-------- 258
C + L+ GK +H H + G + V N LI MY KCG L AR + DGM
Sbjct: 5 CVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSW 64
Query: 259 -----------------------PKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLV 294
KRD +SWN+M+S +N + ++G LF M
Sbjct: 65 TIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGF 124
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD +T +++ D + GR+VH + G +V N ++ MY + EE +
Sbjct: 125 QPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARR 184
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF ++ K+ +SW+++++ Y + +A++ +Q M+ EG PD +T+ SVL AC L
Sbjct: 185 VFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRA 244
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK--NVISWTSII 472
++H + L +++AN L+ MY K +++A +F + +K +VI+W ++I
Sbjct: 245 SKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMI 304
Query: 473 LGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
A FR M+L + P++ T+ +IL+AC +G+ G+ IH A IGV
Sbjct: 305 SAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGS---GRRIHCLAASIGV 361
Query: 531 AFDGFLPNALLDMYVRC-GRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFR 588
+ +LL MY RC + A F ER + AWN ++ A+RG A A+E F+
Sbjct: 362 ESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFK 421
Query: 589 KM 590
M
Sbjct: 422 AM 423
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 156/317 (49%), Gaps = 36/317 (11%)
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G + G+ +H + ++ G + V N LI MY G EE K+ ME +V SWT M
Sbjct: 8 LGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSWTIM 67
Query: 371 ISCYEGSVLPD-KAV-------------------------------ETYQMMEAEGSMPD 398
++ Y + L K V E +Q M+ EG PD
Sbjct: 68 LAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGFQPD 127
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T ++L CA +L G ++HQ A+ +G+ +AN +++MY KC +++A VF
Sbjct: 128 RVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARRVFE 187
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+ KN ISW+S++ NN++ EA+ F+ M L LKP+ VTL+S+L AC + A
Sbjct: 188 SLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQ 247
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERDVSAWNILLTGY 574
+IHA L + D + NAL+ MY + GR++ A + RDV AWN +++ Y
Sbjct: 248 SSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAY 307
Query: 575 AERGQGALAEEFFRKMI 591
A G A FR M+
Sbjct: 308 AHTGHHTRAFGIFRIML 324
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RD 563
+L C R+GAL GK IH H++ G+ + F+ N L++MY +CG ++ A + E +
Sbjct: 1 MLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSN 60
Query: 564 VSAWNILLTGYAERG 578
V +W I+L YA+ G
Sbjct: 61 VFSWTIMLAAYAQNG 75
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 221/408 (54%), Gaps = 32/408 (7%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+L + + ++ + ++FSWN I GY ++G + LY+RM G +KPD +T+P +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ C G G V HV++FG+E D+ V NA ITM + CG+L A VF+ RD +
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
+WN+MI+G + G ++ + ++ M V P+ +T+ +IS+ V D LG+E H Y+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY---------- 374
+ G + + N L+ MY+ G +F M K +VSWTTM+ Y
Sbjct: 286 KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAR 345
Query: 375 -------EGSVLP--------------DKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
E SV+P +A+ + M+ PD++T+ + LSAC+ LG
Sbjct: 346 EILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLG 405
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD+GI +H R L + + L+DMY+KC I +AL+VF +IP +N ++WT++I
Sbjct: 406 ALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVIC 465
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
GL L+ + +AL +F KM+ + + P+ +T + +LSAC G + G++
Sbjct: 466 GLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK 513
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 181/361 (50%), Gaps = 34/361 (9%)
Query: 265 SWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
SWNA I GY E+G+ G ML+ M+ + PD T ++ LG V G+
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGH 183
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
V+K GF D+ V N I M LS G VF++ +D+V+W +MI+ L +A
Sbjct: 184 VLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEA 243
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ Y+ MEAE P+EIT+ ++S+C+ + +L+LG + H GL I + N L+DM
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 444 YSKCK-------------------------------CIDKALEVFHQIPDKNVISWTSII 472
Y KC +D A E+ ++IP+K+V+ W +II
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + EAL F +M + ++P+ VT+V+ LSAC+++GAL G IH + R ++
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLS 423
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D L AL+DMY +CG + A F +R+ W ++ G A G A +F KM
Sbjct: 424 IDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKM 483
Query: 591 I 591
I
Sbjct: 484 I 484
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 177/360 (49%), Gaps = 33/360 (9%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M + G+L A+ VF K RDL +WN +I G K G EA+ +Y+ M V
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEM-EAEKV 255
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ T ++ +C V DL GKE H ++ G E + + NAL+ MYVKCG+L+ AR+
Sbjct: 256 RPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARV 315
Query: 254 VFDGM-------------------------------PKRDRISWNAMISGYFENGEYMKG 282
+FD M P++ + WNA+ISG + + +
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L LF M+ ++PD +T+ + +SA +G +G +H Y+ + S DV++ L+ M
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDM 435
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y GN +VF + ++ ++WT +I A+ + M G +PDEIT
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495
Query: 403 ASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
VLSAC G ++ G K +++ + + + + ++D+ + +++A E+ +P
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 184/446 (41%), Gaps = 92/446 (20%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G +A+K M+ + +E ++ ++ C + + G H + +
Sbjct: 228 NSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKE 287
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD----- 178
++ L NA + M+VK G+L A +F M + L SW ++ GYA+ GF D
Sbjct: 288 HGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREI 347
Query: 179 --------------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
EAL+L+ M + ++PD T L C +
Sbjct: 348 LYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM-QIRTIEPDKVTMVNCLSACSQLGA 406
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L G +H ++ R DV + AL+ MY KCG++ RA VF+ +P+R+ ++W A+I G
Sbjct: 407 LDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICG 466
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+G L F M + + PD +T V+SA HG ++
Sbjct: 467 LALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLV------- 508
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETY 387
EEG K FS M SK VS ++ M+ L +A
Sbjct: 509 -----------------EEGRKYFSEMSSKFNVSPKLKHYSCMVD------LLGRAGHLE 545
Query: 388 QMMEAEGSMP---DEITIASVLSACACLGNLDLG----IKLHQL-AMRTGLISYIIIANT 439
+ E +MP D + ++ AC GN+ +G KL ++ +G +Y+++A+
Sbjct: 546 EAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSG--NYVLLAS- 602
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNV 465
MYS+ K +A + DK V
Sbjct: 603 ---MYSEAKMWKEARSARKLMNDKGV 625
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSAC--- 409
++ R++ +V SW I Y S + Y+ M G++ PD T +L C
Sbjct: 112 RILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQ 171
Query: 410 --ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CLG LG+ H L + G I + N I M C + A +VF++ +++++
Sbjct: 172 YSSCLG---LGVLGHVL--KFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVT 226
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W S+I G + EA+ +++M ++PN +T++ ++S+C+++ L GKE H +
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEE 585
G+ F L NAL+DMYV+CG + A F N ++ + +W ++ GYA G +A E
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 586 FFRKM 590
K+
Sbjct: 347 ILYKI 351
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 252/536 (47%), Gaps = 79/536 (14%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
L NLV+ C + + G +H+ + + L N F+ ++ K + A +VF +
Sbjct: 9 LANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIP 68
Query: 158 DRDLFSWNVLIGGYAKA-------------------------------GFFDEALSLYQR 186
+++FSWN ++ Y KA G+ +AL Y
Sbjct: 69 HKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDS 128
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ + GV P TF V CG + D G+ H VI+ G E+++ VVNAL+ MY KCG
Sbjct: 129 VM-LDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCG 187
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV-- 304
A VF +P+ + +++ M+ G + + + LF +M + D ++LSS+
Sbjct: 188 LNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLG 247
Query: 305 --------ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ + G+++H +K+GF D+ +CN L+ MY G+ + EKVF
Sbjct: 248 VCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVF 307
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ VVSW MI+ Y +KA E Q M+++G PD++T ++L+AC G++
Sbjct: 308 VNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDV- 366
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
RTG ++F +P ++ SW +I+ G
Sbjct: 367 ----------RTG------------------------RQIFDCMPCPSLTSWNAILSGYN 392
Query: 477 LNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N EA+ FRKM + P+ TL ILS+CA +G L GKE+HA + + G D +
Sbjct: 393 QNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVY 452
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++L+++Y +CG+M+ + + F+ E DV WN +L G++ G A FF+KM
Sbjct: 453 VASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKM 508
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/546 (26%), Positives = 260/546 (47%), Gaps = 48/546 (8%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
T + N+ ++ + G QAL DS+ + + C D G H
Sbjct: 103 TVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHG 162
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
VV K ++ + NA L M+ K G A VF + + + ++ ++GG A+ E
Sbjct: 163 VVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKE 222
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCG----------GVPDLKRGKEVHVHVIRFGYE 229
A L+ R+ G++ D + +L C G+ +GK++H ++ G+E
Sbjct: 223 AAELF-RLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFE 281
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D+ + N+L+ MY K GD+ A VF + + +SWN MI+GY K M
Sbjct: 282 RDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRM 341
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ +PD +T ++++A GD + GR
Sbjct: 342 QSDGYEPDDVTYINMLTACVKSGDVRTGR------------------------------- 370
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
++F M + SW ++S Y + +AVE ++ M+ + PD T+A +LS+C
Sbjct: 371 ----QIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSC 426
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LG L+ G ++H + + G + +A++LI++YSKC ++ + VF ++P+ +V+ W
Sbjct: 427 AELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWN 486
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S++ G +N+ +AL FF+KM L P+ + +++S+CA++ +L G++ HA ++
Sbjct: 487 SMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKD 546
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
G D F+ ++L++MY +CG + A F+ R+ WN ++ GYA+ G G A +
Sbjct: 547 GFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLY 606
Query: 588 RKMIDS 593
MI S
Sbjct: 607 NDMISS 612
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 251/538 (46%), Gaps = 56/538 (10%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMS 126
L +++A + M I VD +L +++ +C E G G+ ++ K M
Sbjct: 214 LAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQ-GKQMH 272
Query: 127 HLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
LSV+LG N+ L M+ K GD+ A VF + + SWN++I GY +
Sbjct: 273 TLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSE 332
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+A QRM G +PD DV +N +
Sbjct: 333 KAAEYLQRM-QSDGYEPD----------------------------------DVTYIN-M 356
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+T VK GD+ R +FD MP SWNA++SGY +N ++ + + LF M+ PD
Sbjct: 357 LTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDR 416
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
TL+ ++S+ +G + G+EVH K GF DDV V + LI +Y G E + VFS+
Sbjct: 417 TTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSK 476
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ DVV W +M++ + + L A+ ++ M G P E + A+V+S+CA L +L G
Sbjct: 477 LPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQG 536
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ H ++ G + I + ++LI+MY KC ++ A F +P +N ++W +I G N
Sbjct: 537 QQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQN 596
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGFL 536
AL + M+ + KP+ +T V++L+AC+ + G EI +A + GV
Sbjct: 597 GDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAH 656
Query: 537 PNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGAL----AEEFFR 588
++D R GR ++ + D W ++L+ +L AEE +R
Sbjct: 657 YTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYR 714
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L +N + AL + M++L E + +V C +G H+ + K
Sbjct: 486 NSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVK 545
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G++ + M+ K GD+ A F M R+ +WN +I GYA+ G AL L
Sbjct: 546 DGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCL 605
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMY 242
Y M G KPD T+ VL C + G E+ + + ++G V +I
Sbjct: 606 YNDMI-SSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCL 664
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMIS 271
+ G ++ D MP K D + W ++S
Sbjct: 665 SRAGRFNEVEVILDAMPCKDDAVVWEVVLS 694
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
K S+ L +++ C A + GK +HA R+ + D FL N +++Y +C + A +
Sbjct: 3 KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62
Query: 556 QF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F N +++ +WN +L Y + A F +M
Sbjct: 63 VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQM 98
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 271/521 (52%), Gaps = 5/521 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL + M N+ D+ +++ C + +H+ H+ + +G
Sbjct: 124 GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVG 183
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + ++ G + A VF ++ RD WNV++ GY K+G F+ A+ + M +
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
V T+ C+L C G +VH VI G+E D V N L+ MY KCG+L AR
Sbjct: 244 VNSV-TYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARK 302
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F+ MP+ D ++WN +I+GY +NG + LF M V PD +T +S + + G
Sbjct: 303 LFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 362
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ +EVH Y+++ DV + + LI +Y G+ E K+F + DV T MIS
Sbjct: 363 LRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISG 422
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L A+ T++ + EG +P+ +T+ASVL ACA L L LG +LH ++ L +
Sbjct: 423 YVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENI 482
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-M 492
+ + + + DMY+KC +D A E F ++ + + I W S+I N + A+ FR+M M
Sbjct: 483 VNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGM 542
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
K +SV+L S LS+ A + AL GKE+H + +R + D F+ +AL+DMY +CG++
Sbjct: 543 SGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLAL 602
Query: 553 AWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A FN + + +VS WN ++ Y G + F +M+
Sbjct: 603 ARCVFNLMAGKNEVS-WNSIIAAYGNHGCARECLDLFHEML 642
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 255/496 (51%), Gaps = 5/496 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
L +L R C + +H+ ++ MS + L + L ++V G + +F +
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCA-LSSRVLGLYVLCGRISDGGNLFFGL 105
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
+ WN +I G G+FD AL Y +M V PD YTFP V++ CGG+ ++
Sbjct: 106 ELCNALPWNWMIRGLYMLGWFDFALLFYFKMLG-SNVSPDKYTFPYVIKACGGLNNVPLC 164
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
VH G+ D+ V +ALI +Y G + AR VFD +P+RD I WN M+ GY ++
Sbjct: 165 MVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKS 224
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G++ + F MR + +T + ++S G LG +VHG VI GF D V
Sbjct: 225 GDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVA 284
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY GN + K+F+ M D V+W +I+ Y + D+A + M + G
Sbjct: 285 NTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVK 344
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD +T AS L + G+L ++H +R + + + + LID+Y K ++ A ++
Sbjct: 345 PDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKI 404
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGAL 515
F Q +V T++I G L+ + +A+ FR ++ + PNS+T+ S+L ACA + AL
Sbjct: 405 FQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAAL 464
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
GKE+H L+ + + +A+ DMY +CGR+ A+ F +E D WN +++ +
Sbjct: 465 KLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSF 524
Query: 575 AERGQGALAEEFFRKM 590
++ G+ +A + FR+M
Sbjct: 525 SQNGKPEMAVDLFRQM 540
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 260/537 (48%), Gaps = 13/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L+ +G A+ M+ V+ ++ +C + + G +H +V
Sbjct: 215 NVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIG 274
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ N ++M+ K G+L A +F M D +WN LI GY + GF DEA L
Sbjct: 275 SGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPL 334
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GVKPD TF L + L+ KEVH +++R DV + +ALI +Y
Sbjct: 335 FNAMI-SAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYF 393
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ AR +F D AMISGY +G + + F + + + P+ +T++S
Sbjct: 394 KGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMAS 453
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + KLG+E+H ++K + V+V + + MY G + + F RM D
Sbjct: 454 VLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETD 513
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ W +MIS + + P+ AV+ ++ M G+ D ++++S LS+ A L L G ++H
Sbjct: 514 SICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHG 573
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R S +A+ LIDMYSKC + A VF+ + KN +SW SII + + E
Sbjct: 574 YVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARE 633
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA-HALR----IGVAFDGFLP 537
L F +M+ + P+ VT + I+SAC G + G+ IH H + IG + +
Sbjct: 634 CLDLFHEMLRAGVHPDHVTFLVIISACGHAG--LVGEGIHYFHCMTREYGIGARMEHYA- 690
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++D+Y R GR+ A++ S D W LL G LA+ R +++
Sbjct: 691 -CMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLE 746
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 192/391 (49%), Gaps = 2/391 (0%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+ R C +++ ++VH +I G + + ++ +YV CG + +F G+ +
Sbjct: 50 LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+ WN MI G + G + L+ + M V PD T VI A + + L VH
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+GF D+ V + LIK+Y G + +VF + +D + W M+ Y S +
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNN 229
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ T+ M SM + +T +LS CA G LG ++H L + +G +ANTL+
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MYSKC + A ++F+ +P + ++W +I G N + EA F M+ +KP+SVT
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 349
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
S L + G+L KE+H++ +R V FD +L +AL+D+Y + G ++ A F N
Sbjct: 350 FASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNT 409
Query: 562 R-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
DV+ +++GY G A FR +I
Sbjct: 410 LVDVAVCTAMISGYVLHGLNIDAINTFRWLI 440
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 188/393 (47%), Gaps = 4/393 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS + + V L +A + ++ K GD+ A +F + D+ +I GY G
Sbjct: 369 VHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGL 428
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+A++ ++ + G V P+ T VL C + LK GKE+H +++ E V+V +
Sbjct: 429 NIDAINTFRWLIQEGMV-PNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGS 487
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
A+ MY KCG L A F M + D I WN+MIS + +NG+ + LF M
Sbjct: 488 AITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKF 547
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D ++LSS +S++ + G+E+HGYVI+ FS D V + LI MY G VF
Sbjct: 548 DSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVF 607
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ M K+ VSW ++I+ Y + ++ + M G PD +T ++SAC G +
Sbjct: 608 NLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVG 667
Query: 417 LGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILG 474
GI H + G+ + + ++D+Y + + +A + +P + W +++
Sbjct: 668 EGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGA 727
Query: 475 LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
RL+ + E + +L L P + +LS
Sbjct: 728 CRLHG-NVELAKLASRHLLELDPKNSGYYVLLS 759
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 297 DFMT--LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D++T L S+ A + R+VH +I G SD ++ + ++ +Y+ G +G
Sbjct: 41 DYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGN 100
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F +E + + W MI D A+ Y M PD+ T V+ AC L N
Sbjct: 101 LFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNN 160
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ L + +H A G + + + LI +Y+ I A VF ++P ++ I W ++ G
Sbjct: 161 VPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHG 220
Query: 475 LRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ A+ F M + NSVT ILS CA G G ++H + G FD
Sbjct: 221 YVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFD 280
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ N L+ MY +CG + A FN+ + D WN L+ GY + G A F MI
Sbjct: 281 PQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 340
Query: 593 S 593
+
Sbjct: 341 A 341
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 267/531 (50%), Gaps = 28/531 (5%)
Query: 87 QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
+E N VD L++ C + +H + KT SH L + ++++ K G +
Sbjct: 65 KESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRM 124
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
A VF M R+ +W L+ GY + A+ L++ M P YT L
Sbjct: 125 ECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNA 184
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV-FDGMPKRDRIS 265
C + LK G+++H ++I++ + D + NAL ++Y KCG + L F + ++D IS
Sbjct: 185 CTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVIS 244
Query: 266 WNAMISGYFENGEYMKGLMLFI--MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
W A IS E GE MKG+ +F+ ++ EV V P+ TL+S +S V +LG +VH
Sbjct: 245 WTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHAL 304
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI------------ 371
K+G+ ++ V N L+ +YL G E +++F M ++V+W MI
Sbjct: 305 CTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKD 364
Query: 372 --SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
S Y+ + +A+ + + G PD T +SVLS C+ + L+ G ++H ++TG
Sbjct: 365 NLSAYQKGI---EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTG 421
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+S +++ +++I+MY+KC I++A +VF ++ + +I WT++I G + S +AL F
Sbjct: 422 FLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFE 481
Query: 490 KM-MLNLKPNSVTLVSILSACARIGALMCG---KEIHAHALRIGVAFDGFLPNALLDMYV 545
M ++ ++PN VT V +LSAC G + EI +I D ++ L+DM V
Sbjct: 482 DMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYV--CLVDMLV 539
Query: 546 RCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMIDSK 594
R G+++ A++ + S W+ L+ G +G L + K++ K
Sbjct: 540 RLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLK 590
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 16/300 (5%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
+ E+ + +E L + + C + + G+ +H++ +K ++R+ N+ L +++K G
Sbjct: 270 LDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGC 329
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWV---------GGVKP 195
+ A +F M D +L +WN +I G+A+ + LS YQ+ G+KP
Sbjct: 330 IVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKP 389
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +TF VL C + L++G+++H I+ G+ +DV V +++I MY KCG + RA VF
Sbjct: 390 DPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVF 449
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG--D 313
M R I W MI+G+ ++G + L LF M+ V + P+ +T V+SA G +
Sbjct: 450 LEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVN 509
Query: 314 EKLGR-EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMI 371
E E+ K+ D VC L+ M + G +E + +M+ K W+ +I
Sbjct: 510 EAFNYFEIMQKEYKIKPVMDHYVC--LVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLI 567
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL + + D +++ +C ++G +H+ KT V +G++ +
Sbjct: 374 EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMI 433
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K G + A VF +M R + W +I G+A+ G+ +AL+L++ M V G++P++
Sbjct: 434 NMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLV-GIRPNL 492
Query: 198 YTFPCVLRTCGGVPDLKRG-KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL CG + + + + +D L+ M V+ G + A FD
Sbjct: 493 VTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEA---FD 549
Query: 257 GMPKRD----RISWNAMISGYFENG 277
+ K D W+ +I G G
Sbjct: 550 LIKKMDYKASEFIWSNLIVGCLSQG 574
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 260/491 (52%), Gaps = 13/491 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H V+ T ++ + +A ++M+ + G + A F + WN ++ A
Sbjct: 169 QGRSIHYRVA-TGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALA 227
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
AG A+ L+ F + + + L C L+ G ++H + + V
Sbjct: 228 GAGHHRRAIELF---FQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRV 284
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+NALI+MYV+CG L A VF MP R+ +SW +MI+ ++G Y + LF M
Sbjct: 285 LVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAE 344
Query: 293 LVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++P+ T +SV+SA +G + + GR++H + G D V N LI MY G
Sbjct: 345 GINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLL 404
Query: 350 EEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
E +VF + SK VVS+TTMI+ Y + P +A+E ++ M A G P+EIT A+VL+
Sbjct: 405 AEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC +G+L G +H+ + +GL S A N+L+DMY+KC + A VF + K+++
Sbjct: 465 ACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLV 524
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+WT+II + + AL + +M+ + + P+ TL ++L ACA +G L G++IH A
Sbjct: 525 AWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQA 584
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
LR + D NAL MY +CG ++ A + DV+ W +L ++++G ++A
Sbjct: 585 LRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVAL 644
Query: 585 EFFRKMIDSKG 595
E + +M +S+G
Sbjct: 645 ELYAEM-ESEG 654
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 256/510 (50%), Gaps = 26/510 (5%)
Query: 99 VNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
NL+R C +R D G +H+ +VS+ ++ ++ LG M+ + A +F M
Sbjct: 54 ANLLRQCGNQRALDHGRRVHAHIVSRRLARNAL-LGELVFQMYARCRCFDTAIALFDAMP 112
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DR F WNVL+ + A + L LY+RM V +P F + CG + DL +G+
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMS-VENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H V G + + +AL+TMY +CG + A FD + WNA++S G
Sbjct: 172 SIHYRVA-TGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAG 230
Query: 278 EYMKGLMLFIMMREVLVD--PDFMTLSSVISASELVG----DEKLGREVHGYVIKMGFSD 331
+ + + LF M + + L + +A L G +K+ E+HG
Sbjct: 231 HHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHG--------T 282
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V V N LI MY+ G +E +VF+ M ++VVSWT+MI+ S AV+ + M
Sbjct: 283 RVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMI 342
Query: 392 AEGSMPDEITIASVLSACACLGN---LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
AEG P+E T ASV+SA A LG LD G K+H +G+ + I+ N+LI+MY++
Sbjct: 343 AEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSG 402
Query: 449 CIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
+ +A EVF I + K V+S+T++I N +AL FR+M + PN +T ++
Sbjct: 403 LLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATV 462
Query: 506 LSACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
L+AC IG L G IH + G+ + D F N+L+DMY +CG + A F + +D
Sbjct: 463 LAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKD 522
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ AW ++ + G A + + +M+ S
Sbjct: 523 LVAWTTIIAANVQSGNNRAALDLYDRMLQS 552
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 239/469 (50%), Gaps = 11/469 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H + + V + NA +SM+V+ G L A VF M R++ SW +I A+
Sbjct: 268 GIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQ 327
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA 230
+G + A+ L+ M G+ P+ T+ V+ G L RG+++H + G +A
Sbjct: 328 SGHYSFAVKLFDGMI-AEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA 386
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIM 288
D V N+LI MY + G L AR VFD + + + +S+ MI+ Y NG + L +F
Sbjct: 387 DPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFRE 446
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFG 347
M V P+ +T ++V++A +GD G +H +I+ G S D N L+ MY G
Sbjct: 447 MTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCG 506
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +VF M++KD+V+WTT+I+ S A++ Y M G PD T++++L
Sbjct: 507 DLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLV 566
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
ACA LG+L +G K+H+ A+R+ L N L MY+KC ++KA ++ + +V +
Sbjct: 567 ACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVAT 626
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHA 525
WTS++ + AL + +M ++PN VT + +L +C++ G + G+E H+
Sbjct: 627 WTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSIT 686
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLT 572
G ++D+ R G+++ A +S D AW LL+
Sbjct: 687 SDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLS 735
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 199/411 (48%), Gaps = 15/411 (3%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIG 169
D G +HS ++ + + N+ ++M+ + G L A VF + + + + S+ +I
Sbjct: 370 DRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIA 429
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
YA G +AL +++ M GV P+ TF VL C + DL G +H +I G +
Sbjct: 430 AYAHNGHPRQALEIFREMT-ARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLD 488
Query: 230 A-DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ D N+L+ MY KCGDL A VF+ M +D ++W +I+ ++G L L+
Sbjct: 489 SSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDR 548
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M + + PD TLS+++ A +GD +G ++H ++ D N L MY G+
Sbjct: 549 MLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGS 608
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E+ +++ R DV +WT+M++ + L A+E Y ME+EG P+E+T VL +
Sbjct: 609 LEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLIS 668
Query: 409 CACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
C+ G + G + H + G ++D+ + + A E+ +P + I
Sbjct: 669 CSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEI 728
Query: 467 SWTSIILGLRLNNRSFEALIFFR--KMMLNLKPNS----VTLVSILSACAR 511
+W S++ +L+ +A I R + +L L P S V L I +A R
Sbjct: 729 AWQSLLSSCKLHT---DAEIGTRAAECLLELDPESTSQFVALSQIYAAAGR 776
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
L +R +AL+ K+ + ++L C AL G+ +HAH + +A + L
Sbjct: 28 LISRLDDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALL 87
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY--AERGQGALAEEFFRKM 590
+ MY RC A F++ +R WN+L+ + A+R + L E +R+M
Sbjct: 88 GELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTL--ELYRRM 142
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 251/465 (53%), Gaps = 11/465 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ MF +FGD+ A VF + ++ WN +I GY + G F EA+ L+ ++ V D
Sbjct: 256 IDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLD 315
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF L D+ G+++H ++I+ G + V+ NAL+ MY +CG++ A +
Sbjct: 316 VVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDL 374
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D ++WN M++ + +N ++GL+L M++ D +TL++V+SAS GD
Sbjct: 375 FDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDL 434
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMIS 372
++G++ HGY+I+ G + + + LI MY G E ++VF ++ +D V+W MI+
Sbjct: 435 QIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIA 493
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLI 431
Y S P+KA+ ++ M G P +T+ASVL AC + G + G ++H A+R L
Sbjct: 494 GYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLD 553
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + LIDMYSKC I A VF + K+ +++T++I GL + +AL F M
Sbjct: 554 TNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSM 613
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
LKP++VT +S +SAC G + G ++ G++ + D+ + GR+
Sbjct: 614 QEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRV 673
Query: 551 KPAWNQFNSNERD---VSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ + V+ W LL +G+ LA+ +K++D
Sbjct: 674 EEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLD 718
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 239/450 (53%), Gaps = 16/450 (3%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F M R++ SWN L G Y K G EAL L+ RM G +P +F +
Sbjct: 169 LFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML-EDGFRPTPVSFVNIF-PAAVAD 226
Query: 212 DLKRGKEVHVHVIRFGYE--ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
D +++ ++++G E D+ VV++ I M+ + GD+ AR VFD K++ WN M
Sbjct: 227 DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTM 286
Query: 270 ISGYFENGEYMKGLMLFIMM---REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
I+GY +NG++ + + LF + REV + D +T S ++A+ D LG+++HGY+IK
Sbjct: 287 ITGYVQNGQFSEAIDLFSKILGSREVPL--DVVTFLSALTAASQSQDVSLGQQLHGYLIK 344
Query: 327 -MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
M + V + N L+ MY GN + +F R+ KD+V+W TM++ + + + +
Sbjct: 345 GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLL 404
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
M+ G D +T+ +VLSA + G+L +G + H +R G I + + LIDMY+
Sbjct: 405 LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYA 463
Query: 446 KCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
K ++ A VF + ++ ++W ++I G + + +A++ FR M+ L+P SVTL
Sbjct: 464 KSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTL 523
Query: 503 VSILSACARI-GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
S+L AC + G + GK+IH A+R + + F+ AL+DMY +CG + A N F
Sbjct: 524 ASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMT 583
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + +++G + G G A F M
Sbjct: 584 GKSTVTYTTMISGLGQHGFGKKALALFNSM 613
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 19/446 (4%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
N L+ YA +EAL L + V+ D YT+ L C L+ G+ VH H
Sbjct: 71 NALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 223 VIRFGYE-ADVDVV-NALITMYVKCGDLVRARL-----VFDGMPKRDRISWNAMISGYFE 275
++R D V+ N+L+ +Y AR+ +FD MPKR+ +SWN + Y +
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDV 333
G + L LF+ M E P ++ ++ A+ + D +++G ++K G + +D+
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAA-VADDPSWPFQLYGLLVKYGVEYINDL 249
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + I M+ FG+ + +VF R K+ W TMI+ Y + +A++ + +
Sbjct: 250 FVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGS 309
Query: 394 GSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCID 451
+P D +T S L+A + ++ LG +LH ++ + +I+ N L+ MYS+C +
Sbjct: 310 REVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQ 369
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A ++F ++P+K++++W +++ N+ E L+ +M + +SVTL ++LSA +
Sbjct: 370 TAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASS 429
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERDVSAW 567
G L GK+ H + +R G+ +G L + L+DMY + GR++ A ++ F + +RD W
Sbjct: 430 NTGDLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTW 488
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY + GQ A FR M+++
Sbjct: 489 NAMIAGYTQSGQPEKAILVFRAMLEA 514
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 195/385 (50%), Gaps = 8/385 (2%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH + K M L V LGNA + M+ + G++ A+ +F ++ ++D+ +WN ++ +
Sbjct: 335 GQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFI 394
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F E L L M G D T VL DL+ GK+ H ++IR G E +
Sbjct: 395 QNDFDLEGLLLVYEM-QKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE- 452
Query: 233 DVVNALITMYVKCGDLVRARLVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI MY K G + A+ VFD KRD ++WNAMI+GY ++G+ K +++F M
Sbjct: 453 GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAML 512
Query: 291 EVLVDPDFMTLSSVISASELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E ++P +TL+SV+ A + VG G+++H + ++ +V V LI MY G
Sbjct: 513 EAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEI 572
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF M K V++TTMIS KA+ + M+ +G PD +T S +SAC
Sbjct: 573 TTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISAC 632
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN--VIS 467
G +D G+ L++ G+ + + D+ +K +++A E + ++ V
Sbjct: 633 NYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAI 692
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM 492
W S++ + + A + +K++
Sbjct: 693 WGSLLASCKAQGKQELAKLVTKKLL 717
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIKLHQLA 425
++ Y L ++A+ ++ P D T ++ L+ACA L LG +H
Sbjct: 72 ALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHM 131
Query: 426 MRTG--LISYIIIANTLIDMYSKC-----KCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+R L ++ N+L+++Y+ +D +F +P +NV+SW ++
Sbjct: 132 LRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKT 191
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGF 535
R EAL F +M+ + +P V+ V+I A A +++ ++ GV + D F
Sbjct: 192 GRPQEALELFVRMLEDGFRPTPVSFVNIFPA-AVADDPSWPFQLYGLLVKYGVEYINDLF 250
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ ++ +DM+ G ++ A F+ + +++ WN ++TGY + GQ + A + F K++ S+
Sbjct: 251 VVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSR 310
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 219/413 (53%), Gaps = 35/413 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPF 139
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL++C K G+++H HV++ G + D+ V +LI+MYV+ G L A VFD P RD
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 263 RIS-------------------------------WNAMISGYFENGEYMKGLMLFIMMRE 291
+S WNAMISGY E G Y + L LF M +
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR+VH ++ GF ++ + N LI +Y G E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F R+ KDV+SW T+I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ I K++ SW
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
++I G ++ R+ + F +M + ++P+ +T V +LSAC+ G L G+ I
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 216/430 (50%), Gaps = 40/430 (9%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGD---LVRARLVFDGMPKRDRISWNAMISGYFE 275
+H +I+ G ++ LI + L A VF + + + + WN M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ + + L L++ M + + P+ T V+ + K G+++HG+V+K+G D+ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 336 CNPLIKMYLSFGNREEGEKVFSR-------------------------------MESKDV 364
LI MY+ G E+ KVF + + KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSW MIS Y + +A+E ++ M PDE T+ +V+SACA G+++LG ++H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
G S + I N LID+YSKC ++ A +F ++P K+VISW ++I G N EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 485 LIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGFLPNALL 541
L+ F++M+ + + PN VT++SIL ACA +GA+ G+ IH + + GV L +L+
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG ++ A FNS + +S+WN ++ G+A G+ + + F +M I + +
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 599 KLMGLFRKCQ 608
+GL C
Sbjct: 472 TFVGLLSACS 481
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 179/374 (47%), Gaps = 34/374 (9%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
ALK M L + + +++ C + + EG +H V K L + + + +
Sbjct: 117 SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFS-------------------------------WNV 166
SM+V+ G L A VF K RD+ S WN
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I GYA+ G + EAL L++ M V+PD T V+ C ++ G++VH+ +
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ +++ +VNALI +Y KCG+L A +F+ +P +D ISWN +I GY Y + L+LF
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYL 344
M P+ +T+ S++ A +G +GR +H Y+ K G ++ S+ LI MY
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E +VF+ + K + SW MI + D + + + M G PD+IT
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 405 VLSACACLGNLDLG 418
+LSAC+ G LDLG
Sbjct: 476 LLSACSHSGMLDLG 489
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V +V C + G +H +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G+L A +F ++ +D+ SWN LIGGY + EAL L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G DV T +L C + + G+ +HV++ + G + +LI M
Sbjct: 355 FQEMLRSGETPNDV-TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ + + SWNAMI G+ +G LF MR++ + PD +T
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 302 SSVISASELVGDEKLGREV 320
++SA G LGR +
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 38/337 (11%)
Query: 295 DPDFMTLSSVISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNR 349
DP + ++ + S S L + L R +H +IK+G + + LI+ + F
Sbjct: 25 DPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
VF ++ +++ W TM + S P A++ Y M + G +P+ T VL +C
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 410 ACLGNLDLGIKLH----------QLAMRTGLISY---------------------IIIAN 438
A G ++H L + T LIS ++
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LI Y+ I+ A ++F +IP K+V+SW ++I G EAL F+ MM N++P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T+V+++SACA+ G++ G+++H G + + NAL+D+Y +CG ++ A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 29/257 (11%)
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T S Y LP + Y + S+ S+L C L +L + +H ++
Sbjct: 9 TVPSSSYPFHFLPSSSDPPYDSIRNHPSL-------SLLHNCKTLQSLRI---IHAQMIK 58
Query: 428 TGLISYIIIANTLID---MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
GL + + LI+ + + + A+ VF I + N++ W ++ G L++ A
Sbjct: 59 IGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSA 118
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L + M+ L L PNS T +L +CA+ A G++IH H L++G D ++ +L+ M
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISM 178
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRK-----------MI 591
YV+ GR++ A F+ S RDV ++ L+ GYA RG A++ F + MI
Sbjct: 179 YVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMI 238
Query: 592 D---SKGNWRKLMGLFR 605
GN+++ + LF+
Sbjct: 239 SGYAETGNYKEALELFK 255
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 268/532 (50%), Gaps = 65/532 (12%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
++H +V N L+ + K G L A +FG+M RD+ SWN L+ GY ++ + +L +
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G P+ +T C +++CG + ++ V +F + D +V AL+ M+V+
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 245 CGDL-VRARL------------------------------VFDGMPKRDRISWNAMISGY 273
CG + + +RL +FD MP+RD +SWN M+S
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++G + L + + M+ V D T +S ++A + + G+++H VI+ D
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+++Y G +E + VF+ + ++ V+WT +IS + ++VE + M AE
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
D+ +A+++S C +L LG +LH L +++G I ++++N+LI MY+KC + A
Sbjct: 386 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445
Query: 454 LEVFHQIPDKNVISWTSII------------------------------LGLRLNNRSFE 483
+F + +K+++SWTS+I LG + + + E
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 505
Query: 484 ALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ K+ML+ ++P+ VT V++ CA +GA G +I +++G+ D + NA+
Sbjct: 506 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 565
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ MY +CGR+ A F+ N +D+ +WN ++TGY++ G G A E F ++
Sbjct: 566 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 617
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 238/489 (48%), Gaps = 41/489 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L+ +VK + HA +F M +RD+ SWN+++ +++G EAL + M GV
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKGV 286
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ D T+ L C + L+ GK++H VIR D V +AL+ +Y K G A+
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + R+ ++W +ISG+ + G + + + LF MR L+ D L+++IS D
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LGR++H +K G V V N LI MY N + E +F M KD+VSWT+MI+
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466
Query: 374 YE--GSV---------LPDKAVETYQ---------------------MMEAEGSMPDEIT 401
Y G+V + +K V T+ M+ E PD +T
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ CA LG LG ++ ++ GLI +AN +I MYSKC I +A +VF +
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK- 519
K+++SW ++I G + +A+ F ++ KP+ ++ V++LS C+ G + GK
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 646
Query: 520 --EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYA 575
++ A I + F + ++D+ R G + A + + +A W LL+
Sbjct: 647 YFDMMKRAHNISPGLEHF--SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACK 704
Query: 576 ERGQGALAE 584
G LAE
Sbjct: 705 IHGNNELAE 713
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 185/387 (47%), Gaps = 33/387 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N ++ L +G + +AL + MQ + +D + + C G LH+ V +
Sbjct: 259 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 318
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ H+ + +A + ++ K G A VF + DR+ +W VLI G+ + G F E++ L
Sbjct: 319 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVEL 378
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + D + ++ C DL G+++H ++ G V V N+LI+MY
Sbjct: 379 FNQMR-AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYA 437
Query: 244 KC-------------------------------GDLVRARLVFDGMPKRDRISWNAMISG 272
KC G++ +AR FDGM +++ I+WNAM+
Sbjct: 438 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 497
Query: 273 YFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y ++G GL ++ +M+ E V PD++T ++ +G KLG ++ G +K+G
Sbjct: 498 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 557
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D SV N +I MY G E KVF + KD+VSW MI+ Y + +A+E + +
Sbjct: 558 DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDIL 617
Query: 392 AEGSMPDEITIASVLSACACLGNLDLG 418
G+ PD I+ +VLS C+ G + G
Sbjct: 618 KRGAKPDYISYVAVLSGCSHSGLVQEG 644
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 199/434 (45%), Gaps = 41/434 (9%)
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+CG + D +R + + +V N ++ Y K G L A +F MP RD S
Sbjct: 71 SCGALSDARRLLLMDI------AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVAS 124
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WN ++SGYF++ +Y+ L F+ M R P+ TL+ + + +G L ++ V
Sbjct: 125 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMV 184
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------------------- 358
K DD V L+ M++ G + ++F R
Sbjct: 185 QKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL 244
Query: 359 -----MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
M +DVVSW M+S S +A++ M+++G D T S L+ACA L
Sbjct: 245 ELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 304
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L G +LH +R +A+ L+++Y+K C +A VF+ + D+N ++WT +I
Sbjct: 305 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLIS 364
Query: 474 GLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G E++ F +M L + L +++S C L G+++H+ L+ G
Sbjct: 365 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQ 424
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ N+L+ MY +C ++ A F NE+D+ +W ++T Y++ G A A EFF M
Sbjct: 425 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 484
Query: 592 DSKG-NWRKLMGLF 604
+ W ++G +
Sbjct: 485 EKNVITWNAMLGAY 498
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAERGQ 579
H + +G+A FL N LL Y+ CG + A + +V N++L GYA+ G+
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 580 GALAEEFFRKM-IDSKGNWRKLM-GLFRKCQ 608
+ A E F +M +W LM G F+ Q
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQ 137
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 247/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ ++ G L A +FG+M D+ +WNV+I G+ K G A+ + M VK
Sbjct: 268 INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNM-RKSSVKST 326
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL G V +L G VH I+ G +++ V ++L++MY KC + A VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +R+ + WNAMI GY NGE K + LF+ M+ + D T +S++S + D ++
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEM 446
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G + H +IK + ++ V N L+ MY G E+ ++F M +D VSW T+I Y
Sbjct: 447 GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQ 506
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A + + M + G + D +AS L AC + L G ++H L+++ GL +
Sbjct: 507 DENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHT 566
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
++LIDMYSKC I+ A +VF +P+ +V+S ++I G NN EA++ F++M+ +
Sbjct: 567 GSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGV 625
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAW 554
P+ +T +I+ AC + +L G + H ++ G + +G +L +LL +Y+ RM A
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEAC 685
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ S+ + + W +++G+++ G A +F+++M
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 239/462 (51%), Gaps = 6/462 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + ++ M+ +D+ +L+ C + G HS++ K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GNA + M+ K G L A +F MCDRD SWN +IGGY + EA L
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ RM G+ D L+ C V L +GK+VH ++ G + + ++LI MY
Sbjct: 517 FMRMNSC-GIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYS 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR VF MP+ +S NA+I+GY +N + ++LF M V+P +T ++
Sbjct: 576 KCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFAT 634
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCN-PLIKMYLSFGNREEGEKVFSRMES- 361
++ A LG + HG +IK GFS + L+ +Y++ E +FS + S
Sbjct: 635 IVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSP 694
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K +V WT M+S + + ++A++ Y+ M +G++PD+ T +VL C+ L +L G +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L + +NTLIDMY+KC + + +VF ++ + NV+SW S+I G N
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ +AL F M ++ P+ +T + +L+AC+ G + G++I
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 261/522 (50%), Gaps = 11/522 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A++Y +M++ ++ L +++ D GL +H+ K ++ +G++ +S
Sbjct: 311 AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K + A VF + +R+ WN +I GYA G + + L+ M G D +
Sbjct: 371 MYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDF 429
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF +L TC DL+ G + H +I+ ++ V NAL+ MY KCG L AR +F+ M
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD +SWN +I GY ++ + LF+ M + D L+S + A V G+
Sbjct: 490 CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VH +K G + + LI MY G E+ KVFS M VVS +I+ Y +
Sbjct: 550 QVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN 609
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS---YII 435
L ++AV +Q M +G P EIT A+++ AC +L LG + H ++ G S Y+
Sbjct: 610 L-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLG 668
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
I +L+ +Y + + +A +F ++ K+++ WT ++ G N EAL F+++M +
Sbjct: 669 I--SLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
P+ T V++L C+ + +L G+ IH+ + D N L+DMY +CG MK +
Sbjct: 727 GALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSS 786
Query: 554 WNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F+ R +V +WN L+ GYA+ G A + F M S
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 217/446 (48%), Gaps = 38/446 (8%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + M+ K LG A VF + D + W L GY KAG +EA+ +++RM G
Sbjct: 198 GGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGH 257
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD F V+ T Y+ G L AR
Sbjct: 258 -RPDHLAFVTVINT-----------------------------------YISLGKLKDAR 281
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F MP D ++WN MISG+ + G + + F+ MR+ V TL SV+SA +V
Sbjct: 282 LLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ LG VH IK+G + ++ V + L+ MY E KVF +E ++ V W MI
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIR 401
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + K +E + M++ G D+ T S+LS CA +L++G + H + ++ L
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTK 461
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
+ + N L+DMY+KC ++ A ++F + D++ +SW +II G + EA F +M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMN 521
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ + L S L AC + L GK++H +++ G+ ++L+DMY +CG ++
Sbjct: 522 SCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIE 581
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAE 576
A F+S E V + N L+ GY++
Sbjct: 582 DARKVFSSMPEWSVVSMNALIAGYSQ 607
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 39/462 (8%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
RLGNA + ++ K + +A F + ++D+ +WN ++ Y+ G + L + +F
Sbjct: 96 RLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLF-E 153
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ P+ +TF VL T +++ G+++H +I+ G E + AL+ MY KC L
Sbjct: 154 NLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGD 213
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+ VFDG+ + + W + SGY + G + +++F MR PD + +VI+
Sbjct: 214 AQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINT--- 270
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
Y+S G ++ +F M S DVV+W M
Sbjct: 271 --------------------------------YISLGKLKDARLLFGEMPSPDVVAWNVM 298
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + A+E + M T+ SVLSA + NLDLG+ +H A++ GL
Sbjct: 299 ISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I + ++L+ MYSKC+ ++ A +VF + ++N + W ++I G N S + + F
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMD 418
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + T S+LS CA L G + H+ ++ + + F+ NAL+DMY +CG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGA 478
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F +RD +WN ++ GY + + A + F +M
Sbjct: 479 LEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRM 520
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 46/390 (11%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK VH + G +++ + NA++ +Y KC + A F+ + K D +WN+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEK-DVTAWNSMLSM 134
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y G+ K L F+ + E L+ P+ T S V+S S + + GR++H +IKMG +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
L+ MY + ++VF + + V WT + S Y + LP++AV ++ M
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD + +V++ LG L
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKL-----------------------------------KD 279
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV-----TLVSILS 507
A +F ++P +V++W +I G A+ +F LN++ +SV TL S+LS
Sbjct: 280 ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYF----LNMRKSSVKSTRSTLGSVLS 335
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
A + L G +HA A+++G+A + ++ ++L+ MY +C +M+ A F + ER+
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVL 395
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSKGN 596
WN ++ GYA G+ E F M S N
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%)
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTG 573
AL GK +H+ +L +G+ +G L NA++D+Y +C ++ A QFNS E+DV+AWN +L+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVTAWNSMLSM 134
Query: 574 YAERGQ 579
Y+ GQ
Sbjct: 135 YSSIGQ 140
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 221/408 (54%), Gaps = 32/408 (7%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+L + + ++ + ++FSWN I GY ++G + LY+RM G +KPD +T+P +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ C G G V HV++FG+E D+ V NA ITM + CG+L A VF+ RD +
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
+WN+MI+G + G ++ + ++ M V P+ +T+ +IS+ V D LG+E H Y+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY---------- 374
+ G + + N L+ MY+ G +F M K +VSWTTM+ Y
Sbjct: 286 KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAR 345
Query: 375 -------EGSVLP--------------DKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
E SV+P +A+ + M+ PD++T+ + LSAC+ LG
Sbjct: 346 EILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLG 405
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD+GI +H R L + + L+DMY+KC I +AL+VF +IP +N ++WT++I
Sbjct: 406 ALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVIC 465
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
GL L+ + +AL +F KM+ + + P+ +T + +LSAC G + G++
Sbjct: 466 GLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRK 513
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 181/361 (50%), Gaps = 34/361 (9%)
Query: 265 SWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
SWNA I GY E+G+ G ML+ M+ + PD T ++ LG V G+
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGH 183
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
V+K GF D+ V N I M LS G VF++ +D+V+W +MI+ L +A
Sbjct: 184 VLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEA 243
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ Y+ MEAE P+EIT+ ++S+C+ + +L+LG + H GL I + N L+DM
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 444 YSKCK-------------------------------CIDKALEVFHQIPDKNVISWTSII 472
Y KC +D A E+ ++IP+K+V+ W +II
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + EAL F +M + ++P+ VT+V+ LSAC+++GAL G IH + R ++
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLS 423
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D L AL+DMY +CG + A F +R+ W ++ G A G A +F KM
Sbjct: 424 IDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKM 483
Query: 591 I 591
I
Sbjct: 484 I 484
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 177/360 (49%), Gaps = 33/360 (9%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA ++M + G+L A+ VF K RDL +WN +I G K G EA+ +Y+ M V
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEM-EAEKV 255
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ T ++ +C V DL GKE H ++ G E + + NAL+ MYVKCG+L+ AR+
Sbjct: 256 RPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARV 315
Query: 254 VFDGM-------------------------------PKRDRISWNAMISGYFENGEYMKG 282
+FD M P++ + WNA+ISG + + +
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L LF M+ ++PD +T+ + +SA +G +G +H Y+ + S DV++ L+ M
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDM 435
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y GN +VF + ++ ++WT +I A+ + M G +PDEIT
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495
Query: 403 ASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
VLSAC G ++ G K +++ + + + + ++D+ + +++A E+ +P
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 184/446 (41%), Gaps = 92/446 (20%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G +A+K M+ + +E ++ ++ C + + G H + +
Sbjct: 228 NSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKE 287
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD----- 178
++ L NA + M+VK G+L A +F M + L SW ++ GYA+ GF D
Sbjct: 288 HGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREI 347
Query: 179 --------------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
EAL+L+ M + ++PD T L C +
Sbjct: 348 LYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM-QIRTIEPDKVTMVNCLSACSQLGA 406
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L G +H ++ R DV + AL+ MY KCG++ RA VF+ +P+R+ ++W A+I G
Sbjct: 407 LDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICG 466
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+G L F M + + PD +T V+SA HG ++
Sbjct: 467 LALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLV------- 508
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETY 387
EEG K FS M SK VS ++ M+ L +A
Sbjct: 509 -----------------EEGRKYFSEMSSKFNVSPKLKHYSCMVD------LLGRAGHLE 545
Query: 388 QMMEAEGSMP---DEITIASVLSACACLGNLDLG----IKLHQL-AMRTGLISYIIIANT 439
+ E +MP D + ++ AC GN+ +G KL ++ +G +Y+++A+
Sbjct: 546 EAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSG--NYVLLAS- 602
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNV 465
MYS+ K +A + DK V
Sbjct: 603 ---MYSEAKMWKEARSARKLMNDKGV 625
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 13/245 (5%)
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSAC--- 409
++ R++ +V SW I Y S + Y+ M G++ PD T +L C
Sbjct: 112 RILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQ 171
Query: 410 --ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CLG LG+ H ++ G I + N I M C + A +VF++ +++++
Sbjct: 172 YSSCLG---LGVLGH--VLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVT 226
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W S+I G + EA+ +++M ++PN +T++ ++S+C+++ L GKE H +
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEE 585
G+ F L NAL+DMYV+CG + A F N ++ + +W ++ GYA G +A E
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 586 FFRKM 590
K+
Sbjct: 347 ILYKI 351
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 251/465 (53%), Gaps = 11/465 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ MF +FGD+ A VF + ++ WN +I GY + G F EA+ L+ ++ V D
Sbjct: 256 IDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLD 315
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF L D+ G+++H ++I+ G + V+ NAL+ MY +CG++ A +
Sbjct: 316 VVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDL 374
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D ++WN M++ + +N ++GL+L M++ D +TL++V+SAS GD
Sbjct: 375 FDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDL 434
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMIS 372
++G++ HGY+I+ G + + + LI MY G E ++VF ++ +D V+W MI+
Sbjct: 435 QIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIA 493
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLI 431
Y S P+KA+ ++ M G P +T+ASVL AC + G + G ++H A+R L
Sbjct: 494 GYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLD 553
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + LIDMYSKC I A VF + K+ +++T++I GL + +AL F M
Sbjct: 554 TNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSM 613
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
LKP++VT +S +SAC G + G ++ G++ + D+ + GR+
Sbjct: 614 QEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRV 673
Query: 551 KPAWNQFNSNERD---VSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ + V+ W LL +G+ LA+ +K++D
Sbjct: 674 EEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLD 718
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 239/450 (53%), Gaps = 16/450 (3%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F M R++ SWN L G Y K G EAL L+ RM G +P +F +
Sbjct: 169 LFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML-EDGFRPTPVSFVNIF-PAAVAD 226
Query: 212 DLKRGKEVHVHVIRFGYE--ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
D +++ ++++G E D+ VV++ I M+ + GD+ AR VFD K++ WN M
Sbjct: 227 DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTM 286
Query: 270 ISGYFENGEYMKGLMLFIMM---REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
I+GY +NG++ + + LF + REV + D +T S ++A+ D LG+++HGY+IK
Sbjct: 287 ITGYVQNGQFSEAIDLFSKILGSREVPL--DVVTFLSALTAASQSQDVSLGQQLHGYLIK 344
Query: 327 -MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
M + V + N L+ MY GN + +F R+ KD+V+W TM++ + + + +
Sbjct: 345 GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLL 404
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
M+ G D +T+ +VLSA + G+L +G + H +R G I + + LIDMY+
Sbjct: 405 LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYA 463
Query: 446 KCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
K ++ A VF + ++ ++W ++I G + + +A++ FR M+ L+P SVTL
Sbjct: 464 KSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTL 523
Query: 503 VSILSACARI-GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
S+L AC + G + GK+IH A+R + + F+ AL+DMY +CG + A N F
Sbjct: 524 ASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMT 583
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + +++G + G G A F M
Sbjct: 584 GKSTVTYTTMISGLGQHGFGKKALALFNSM 613
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 231/446 (51%), Gaps = 19/446 (4%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
N L+ YA +EAL LY + V+ D YT+ L C L+ G+ VH H
Sbjct: 71 NALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 223 VIRFGYE-ADVDVV-NALITMYVKCGDLVRARL-----VFDGMPKRDRISWNAMISGYFE 275
++R D V+ N+L+ +Y AR+ +FD MPKR+ +SWN + Y +
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDV 333
G + L LF+ M E P ++ ++ A+ + D +++G ++K G + +D+
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAA-VADDPSWPFQLYGLLVKYGVEYINDL 249
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + I M+ FG+ + +VF R K+ W TMI+ Y + +A++ + +
Sbjct: 250 FVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGS 309
Query: 394 GSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCID 451
+P D +T S L+A + ++ LG +LH ++ + +I+ N L+ MYS+C +
Sbjct: 310 REVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQ 369
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A ++F ++P+K++++W +++ N+ E L+ +M + +SVTL ++LSA +
Sbjct: 370 TAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASS 429
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERDVSAW 567
G L GK+ H + +R G+ +G L + L+DMY + GR++ A ++ F + +RD W
Sbjct: 430 NTGDLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTW 488
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY + GQ A FR M+++
Sbjct: 489 NAMIAGYTQSGQPEKAILVFRAMLEA 514
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 195/385 (50%), Gaps = 8/385 (2%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH + K M L V LGNA + M+ + G++ A+ +F ++ ++D+ +WN ++ +
Sbjct: 335 GQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFI 394
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F E L L M G D T VL DL+ GK+ H ++IR G E +
Sbjct: 395 QNDFDLEGLLLVYEM-QKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE- 452
Query: 233 DVVNALITMYVKCGDLVRARLVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI MY K G + A+ VFD KRD ++WNAMI+GY ++G+ K +++F M
Sbjct: 453 GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAML 512
Query: 291 EVLVDPDFMTLSSVISASELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E ++P +TL+SV+ A + VG G+++H + ++ +V V LI MY G
Sbjct: 513 EAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEI 572
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF M K V++TTMIS KA+ + M+ +G PD +T S +SAC
Sbjct: 573 TTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISAC 632
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN--VIS 467
G +D G+ L++ G+ + + D+ +K +++A E + ++ V
Sbjct: 633 NYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAI 692
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM 492
W S++ + + A + +K++
Sbjct: 693 WGSLLASCKAQGKQELAKLVTKKLL 717
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%), Gaps = 15/240 (6%)
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIKLHQLA 425
++ Y LP++A+ Y ++ P D T ++ L+ACA L LG +H
Sbjct: 72 ALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHM 131
Query: 426 MRTG--LISYIIIANTLIDMYSKC-----KCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+R L ++ N+L+++Y+ +D +F +P +NV+SW ++
Sbjct: 132 LRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKT 191
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGF 535
R EAL F +M+ + +P V+ V+I A A +++ ++ GV + D F
Sbjct: 192 GRPQEALELFVRMLEDGFRPTPVSFVNIFPA-AVADDPSWPFQLYGLLVKYGVEYINDLF 250
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ ++ +DM+ G ++ A F+ + +++ WN ++TGY + GQ + A + F K++ S+
Sbjct: 251 VVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSR 310
>gi|297745796|emb|CBI15852.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 255/503 (50%), Gaps = 8/503 (1%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTM--SHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
LV+L+R K EG +H ++ K+ S+RL N M+ + AW VF
Sbjct: 78 LVDLLRDSAAKGSIREGKSVHGLLLKSSFGDEESIRLFNHVAYMYAECSCFVEAWRVFDG 137
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R+ FSW V+I G K G F + + M V G+ PD + + V+++C G+ ++
Sbjct: 138 MPHRNSFSWTVMIAGSKKNGLFLDGFRFFYDML-VDGILPDEFVYSAVIQSCIGLGCIEL 196
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ VH +++ G+ DV V +L++MY K + + VF+ + + +++SW A+ISG
Sbjct: 197 GEAVHGQIVKRGFWDDVIVGTSLLSMYAKLHNSEASVRVFNAIAEHNQVSWGAVISGLSS 256
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG Y++ F+ M P+ T SSV+ A + D GREVH V++ G +V V
Sbjct: 257 NGLYLEAFHQFLAMITQGFTPNMYTFSSVLKAVGKIRDATKGREVHHCVMEYGMESNVVV 316
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVS--WTTMISCYEGSVLPDKAVETYQMMEAE 393
LI MY G+ + VF R K V+ W MIS Y +A++ + M
Sbjct: 317 GTSLIDMYSKCGHLSDARSVFDRNFYKSKVNNPWNAMISSYTQCGYWQEALDLFIEMSLN 376
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII-IANTLIDMYSKCKCIDK 452
PD T V SA A L L G ++H + +++G S ++ + N ++D Y KC+ ++
Sbjct: 377 DVKPDLYTYGGVFSAIAALKWLYFGRQVHGMVVKSGNGSRVLSLNNAIVDAYFKCQSLED 436
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A +VF ++ +++++SWT+++ + EAL F +M PN T S+L ACA
Sbjct: 437 ARKVFDRMQERDMVSWTTLVSAYVQCYQPSEALSIFSQMREQGFMPNQFTFSSVLVACAS 496
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNIL 570
+ L G+++H + G+ D + ++L +MY + G + A F DV +W+ +
Sbjct: 497 LSLLEYGRQVHGLICKAGLDDDNCIESSLTNMYAKSGNIIDAVEVFEKIVCPDVVSWSAI 556
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
+ GYA+ G A E +KM S
Sbjct: 557 IYGYAQHGFLDKAVELVQKMEQS 579
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 228/438 (52%), Gaps = 5/438 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++ M I DE +++ C + G +H + K V +
Sbjct: 156 NGLFLDGFRFFYDMLVDGILPDEFVYSAVIQSCIGLGCIELGEAVHGQIVKRGFWDDVIV 215
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + LSM+ K + + VF + + + SW +I G + G + EA + M G
Sbjct: 216 GTSLLSMYAKLHNSEASVRVFNAIAEHNQVSWGAVISGLSSNGLYLEAFHQFLAMI-TQG 274
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P++YTF VL+ G + D +G+EVH V+ +G E++V V +LI MY KCG L AR
Sbjct: 275 FTPNMYTFSSVLKAVGKIRDATKGREVHHCVMEYGMESNVVVGTSLIDMYSKCGHLSDAR 334
Query: 253 LVFDGMPKRDRIS--WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VFD + +++ WNAMIS Y + G + + L LFI M V PD T V SA
Sbjct: 335 SVFDRNFYKSKVNNPWNAMISSYTQCGYWQEALDLFIEMSLNDVKPDLYTYGGVFSAIAA 394
Query: 311 VGDEKLGREVHGYVIKMGFSDDV-SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ GR+VHG V+K G V S+ N ++ Y + E+ KVF RM+ +D+VSWTT
Sbjct: 395 LKWLYFGRQVHGMVVKSGNGSRVLSLNNAIVDAYFKCQSLEDARKVFDRMQERDMVSWTT 454
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++S Y P +A+ + M +G MP++ T +SVL ACA L L+ G ++H L + G
Sbjct: 455 LVSAYVQCYQPSEALSIFSQMREQGFMPNQFTFSSVLVACASLSLLEYGRQVHGLICKAG 514
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L I ++L +MY+K I A+EVF +I +V+SW++II G + +A+ +
Sbjct: 515 LDDDNCIESSLTNMYAKSGNIIDAVEVFEKIVCPDVVSWSAIIYGYAQHGFLDKAVELVQ 574
Query: 490 KM-MLNLKPNSVTLVSIL 506
KM ++PNS L+S L
Sbjct: 575 KMEQSGIQPNSNILLSHL 592
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 235/464 (50%), Gaps = 10/464 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + + K G + A VF + +++SW +L+ YA+ G L L ++M +G V
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG-V 178
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI---RFGYEADVDVVNALITMYVKCGDLVR 250
P+ T V+ + + +++H + Y DV +V ALI MY KCGD+
Sbjct: 179 WPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTY--DVVLVTALIDMYAKCGDIFH 236
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +VFD +D NAMIS Y + G + + F ++ + P+ +T + + A
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G R H I DV V L+ MY G+ E+ +VF RM K+VV+W M
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVM 356
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y D+A++ Y MEA G PDEIT +VL +C+ +L G +H+ + G
Sbjct: 357 IAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGY 416
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQ--IPDKNVISWTSIILGLRLNNRSFEALIFF 488
S + + + LI MYS C + A++VFH+ +VISWT+++ L N AL F
Sbjct: 417 DSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALF 476
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
RKM L ++ N VT VS + AC+ IGAL+ G I + G D L +L+++Y +C
Sbjct: 477 RKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKC 536
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
GR+ A F+ + +++ WN +L ++ G+ L++E ++M
Sbjct: 537 GRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEM 580
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 227/445 (51%), Gaps = 5/445 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS-HLSVR 131
NG + L+ L M L + + L ++ +DE +H+ + T V
Sbjct: 160 NGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVV 219
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L A + M+ K GD+ HA VF + ++DL N +I Y + G+ +A+S + R+
Sbjct: 220 LVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRI-QPS 278
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++P+ T+ + R C + H+ I DV V AL++MY +CG L A
Sbjct: 279 GLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDA 338
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD MP ++ ++WN MI+GY + G + L L++ M V+PD +T +V+ + L
Sbjct: 339 RRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLA 398
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESKDVVSWTT 369
GR++H +V+ G+ ++V + LI MY + G+ + VF + V+SWT
Sbjct: 399 EHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTA 458
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M++ + A+ ++ M+ EG + +T S + AC+ +G L G + + + TG
Sbjct: 459 MLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTG 518
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ +++ +LI++Y KC +D ALEVFH + KN+++W +I+ N + +
Sbjct: 519 HLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQ 578
Query: 490 KMMLN-LKPNSVTLVSILSACARIG 513
+M L+ +PN +TL+++L C+ G
Sbjct: 579 EMDLDGAQPNEMTLLNMLFGCSHNG 603
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 193/405 (47%), Gaps = 9/405 (2%)
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G V P Y +L+ G V LK + H RF D ++N ++ Y KCG +
Sbjct: 79 GFVDPAAYV--SLLKQSGDVTALKTIQAHISHSKRFA--GDRLLLNCVVEAYGKCGCVKD 134
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
ARLVF + + SW +++ Y +NG + L L M + V P+ +TL++VI A
Sbjct: 135 ARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSE 194
Query: 311 VGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G+ R++H + DV + LI MY G+ E VF + +KD+
Sbjct: 195 LGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNA 254
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y AV T+ ++ G P+++T A + ACA G H + +
Sbjct: 255 MISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSK 314
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L +++ L+ MYS+C ++ A VF ++P KNV++W +I G + EAL +
Sbjct: 315 LRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYV 374
Query: 490 KM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M ++P+ +T V++L +C+ L G++IH H + G + +AL+ MY CG
Sbjct: 375 SMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACG 434
Query: 549 RMKPAWNQFN---SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A + F+ + V +W +LT G+G A FRKM
Sbjct: 435 SLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKM 479
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 245/495 (49%), Gaps = 42/495 (8%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F + F +A VF + + + WN ++ GYA + AL LY M +G + P
Sbjct: 6 FCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLG-LLP 64
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV----------------------- 232
+ YTFP +L++C + G+++H HV++ GYE D+
Sbjct: 65 NSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVF 124
Query: 233 ------DVVN--ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
DVV+ ALIT Y G++ A+ +FD +P +D +SWNAMISGY E G Y + L
Sbjct: 125 DRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALE 184
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M + V PD T+ +V+SA +LGR+VH ++ GF ++ + N LI +Y
Sbjct: 185 LFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYS 244
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E +F + KDVVSW T+I Y L +A+ +Q M G P+++TI S
Sbjct: 245 KCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVS 304
Query: 405 VLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+L ACA LG +D+G +H + + + + +LIDMY+KC I+ A +VF+ +
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
K++ SW ++I G ++ R+ F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Query: 522 HAHALR---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAE 576
+ I + + ++D+ G K A + E D W LL
Sbjct: 425 FKSMTQDYDITPKLEHY--GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRR 482
Query: 577 RGQGALAEEFFRKMI 591
G LAE F R ++
Sbjct: 483 HGNLELAESFARNLM 497
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 223/500 (44%), Gaps = 45/500 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L+ ALK M L + + L++ C + ++EG +H V K
Sbjct: 35 NTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLK 94
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------F 176
+ + + +SM+ + G L A VF + RD+ S+ LI GYA +G
Sbjct: 95 LGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEM 154
Query: 177 FD------------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
FD EAL L++ M V+PD T VL C
Sbjct: 155 FDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT-NVRPDEGTMVTVLSACAQSRS 213
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
++ G++VH + G+ +++ +VNALI +Y KCG + A +F+G+ +D +SWN +I G
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG 273
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFS 330
Y Y + L+LF M P+ +T+ S++ A +G +GR +H Y+ K +
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ S+ LI MY G+ E +VF+ M K + SW MI + + + + M
Sbjct: 334 NAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKC 449
G PD+IT +LSAC+ G LDLG + + + + + +ID+
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGL 453
Query: 450 IDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSIL 506
+A E+ +P + + + W S++ R + A F R +M P S L+S +
Sbjct: 454 FKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNI 513
Query: 507 SAC-------ARIGALMCGK 519
A A++ AL+ GK
Sbjct: 514 YATAGEWDEVAKVRALLNGK 533
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 136/272 (50%), Gaps = 33/272 (12%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF+ ++ + + W TM+ Y S P A++ Y +M + G +P+ T +L +CA
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSK-------CKCIDK--------------- 452
+ G ++H ++ G + + +LI MY++ K D+
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 453 ---------ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
A E+F +IP K+V+SW ++I G EAL F++MM N++P+ T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V++LSACA+ ++ G+++H+ G + + NAL+D+Y +CG+++ A F +
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 251/465 (53%), Gaps = 11/465 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ MF +FGD+ A VF + ++ WN +I GY + G F EA+ L+ ++ V D
Sbjct: 126 IDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLD 185
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF L D+ G+++H ++I+ G + V+ NAL+ MY +CG++ A +
Sbjct: 186 VVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDL 244
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D ++WN M++ + +N ++GL+L M++ D +TL++V+SAS GD
Sbjct: 245 FDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDL 304
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMIS 372
++G++ HGY+I+ G + + + LI MY G E ++VF ++ +D V+W MI+
Sbjct: 305 QIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIA 363
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLI 431
Y S P+KA+ ++ M G P +T+ASVL AC + G + G ++H A+R L
Sbjct: 364 GYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLD 423
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + LIDMYSKC I A VF + K+ +++T++I GL + +AL F M
Sbjct: 424 TNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSM 483
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
LKP++VT +S +SAC G + G ++ G++ + D+ + GR+
Sbjct: 484 QEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRV 543
Query: 551 KPAWNQFNSNERD---VSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ + V+ W LL +G+ LA+ +K++D
Sbjct: 544 EEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLD 588
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 239/450 (53%), Gaps = 16/450 (3%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F M R++ SWN L G Y K G EAL L+ RM G +P +F +
Sbjct: 39 LFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML-EDGFRPTPVSFVNIF-PAAVAD 96
Query: 212 DLKRGKEVHVHVIRFGYE--ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
D +++ ++++G E D+ VV++ I M+ + GD+ AR VFD K++ WN M
Sbjct: 97 DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTM 156
Query: 270 ISGYFENGEYMKGLMLF---IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
I+GY +NG++ + + LF + REV + D +T S ++A+ D LG+++HGY+IK
Sbjct: 157 ITGYVQNGQFSEAIDLFSKILGSREVPL--DVVTFLSALTAASQSQDVSLGQQLHGYLIK 214
Query: 327 -MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
M + V + N L+ MY GN + +F R+ KD+V+W TM++ + + + +
Sbjct: 215 GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLL 274
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
M+ G D +T+ +VLSA + G+L +G + H +R G I + + LIDMY+
Sbjct: 275 LVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYA 333
Query: 446 KCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
K ++ A VF + ++ ++W ++I G + + +A++ FR M+ L+P SVTL
Sbjct: 334 KSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTL 393
Query: 503 VSILSACARI-GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
S+L AC + G + GK+IH A+R + + F+ AL+DMY +CG + A N F
Sbjct: 394 ASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMT 453
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + +++G + G G A F M
Sbjct: 454 GKSTVTYTTMISGLGQHGFGKKALALFNSM 483
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 198/371 (53%), Gaps = 15/371 (4%)
Query: 236 NALITMYVKCGDLVRARL-----VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
N+L+ +Y AR+ +FD MPKR+ +SWN + Y + G + L LF+ M
Sbjct: 16 NSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML 75
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYLSFGN 348
E P ++ ++ A+ + D +++G ++K G + +D+ V + I M+ FG+
Sbjct: 76 EDGFRPTPVSFVNIFPAA-VADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGD 134
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLS 407
+ +VF R K+ W TMI+ Y + +A++ + + +P D +T S L+
Sbjct: 135 VQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALT 194
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
A + ++ LG +LH ++ + +I+ N L+ MYS+C + A ++F ++P+K+++
Sbjct: 195 AASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIV 254
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+W +++ N+ E L+ +M + +SVTL ++LSA + G L GK+ H +
Sbjct: 255 TWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYL 314
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERDVSAWNILLTGYAERGQGAL 582
+R G+ +G L + L+DMY + GR++ A ++ F + +RD WN ++ GY + GQ
Sbjct: 315 IRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEK 373
Query: 583 AEEFFRKMIDS 593
A FR M+++
Sbjct: 374 AILVFRAMLEA 384
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 195/385 (50%), Gaps = 8/385 (2%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH + K M L V LGNA + M+ + G++ A+ +F ++ ++D+ +WN ++ +
Sbjct: 205 GQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFI 264
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F E L L M G D T VL DL+ GK+ H ++IR G E +
Sbjct: 265 QNDFDLEGLLLVYEM-QKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE- 322
Query: 233 DVVNALITMYVKCGDLVRARLVFDGM--PKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI MY K G + A+ VFD KRD ++WNAMI+GY ++G+ K +++F M
Sbjct: 323 GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAML 382
Query: 291 EVLVDPDFMTLSSVISASELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E ++P +TL+SV+ A + VG G+++H + ++ +V V LI MY G
Sbjct: 383 EAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEI 442
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF M K V++TTMIS KA+ + M+ +G PD +T S +SAC
Sbjct: 443 TTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISAC 502
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN--VIS 467
G +D G+ L++ G+ + + D+ +K +++A E + ++ V
Sbjct: 503 NYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAI 562
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM 492
W S++ + + A + +K++
Sbjct: 563 WGSLLASCKAQGKQELAKLVTKKLL 587
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 435 IIANTLIDMYSKC-----KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
++ N+L+++Y+ +D +F +P +NV+SW ++ R EAL F
Sbjct: 13 VLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFV 72
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFLPNALLDMYVR 546
+M+ + +P V+ V+I A A +++ ++ GV + D F+ ++ +DM+
Sbjct: 73 RMLEDGFRPTPVSFVNIFPA-AVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSE 131
Query: 547 CGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
G ++ A F+ + +++ WN ++TGY + GQ + A + F K++ S+
Sbjct: 132 FGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSR 180
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 261/529 (49%), Gaps = 21/529 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
+G ++A+ MQ+ + D + +++ C +G +H+ +V + SV
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSV- 164
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L ++ G + A +F +M +RDL SWN I A++G D AL L+QRM +
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRM-QLE 222
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P T L C +++ + +H V G E + V AL + Y + G L +A
Sbjct: 223 GVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQA 279
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ VFD +RD +SWNAM+ Y ++G + +LF M + P +TL ++AS
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGC 336
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR +H ++ G D+ + N L+ MY G+ EE +F + + VSW TMI
Sbjct: 337 SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMI 395
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC----LGNLDLGIKLHQLAMR 427
+ +A+E +Q M+ EG P T ++L A A + G KLH +
Sbjct: 396 AGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS 455
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQ--IPDK-NVISWTSIILGLRLNNRSFEA 484
G S I ++ MY+ C ID+A F + + D+ +V+SW +II L + A
Sbjct: 456 CGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L FFR+M L+ + PN +T V++L ACA AL G +H H G+ + F+ AL M
Sbjct: 516 LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASM 575
Query: 544 YVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y RCG ++ A F + ERDV +N ++ Y++ G A + F +M
Sbjct: 576 YGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRM 624
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 245/502 (48%), Gaps = 20/502 (3%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV L+R R +G +H+ + L LGN L +++K LG VF ++
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSL--GLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD SW +I Y + G A+ ++ RM GV+ D TF VL+ C + DL +G+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRM-QQEGVRCDAVTFLAVLKACARLGDLSQGR 148
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H ++ G E + N L+ +Y CG + A L+F+ M +RD +SWNA I+ ++G
Sbjct: 149 SIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSG 207
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L LF M+ V P +TL +S + + R +H V + G + V
Sbjct: 208 DLDMALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVST 264
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L Y G+ ++ ++VF R +DVVSW M+ Y +A + M EG P
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP 324
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
++T+ + + C+ +L G +H A+ GL I++ N L+DMY++C ++A +F
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA----RI 512
IP N +SW ++I G + AL F++M L + P T +++L A A
Sbjct: 382 EGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN----SNERDVSAWN 568
A+ G+++H+ + G A + + A++ MY CG + A F + DV +WN
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
+++ ++ G G A FFR+M
Sbjct: 501 AIISSLSQHGHGKRALGFFRRM 522
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 231/458 (50%), Gaps = 17/458 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G L+ AL+ MQ + LV + +C R + +HS+V ++ ++ +
Sbjct: 206 SGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QARAIHSIVRESGLEQTLVV 262
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A S + + G L A VF + +RD+ SWN ++G YA+ G EA L+ RM G
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH-EG 321
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P T + G L+ G+ +H + G + D+ + NAL+ MY +CG AR
Sbjct: 322 IPPSKVTL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT----LSSVISAS 308
+F+G+P + +SWN MI+G + G+ + L LF M+ + P T L +V S
Sbjct: 379 HLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNP 437
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR--MESK-DVV 365
E GR++H ++ G++ + ++ ++KMY S G +E F R ME + DVV
Sbjct: 438 EEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVV 497
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +IS +A+ ++ M+ G P++IT +VL ACA L G+ +H
Sbjct: 498 SWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHL 557
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
+G+ S + +A L MY +C ++ A E+F ++ +++V+ + ++I N + EA
Sbjct: 558 RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617
Query: 485 L-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
L +F+R +P+ + VS+LSAC+ G G EI
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 154/286 (53%), Gaps = 11/286 (3%)
Query: 311 VGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
GD++L GR +H ++ +G +++ N L+++YL + + E+VFSR+E +D SW
Sbjct: 39 AGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASW 96
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TT+I+ Y +A+ + M+ EG D +T +VL ACA LG+L G +H +
Sbjct: 97 TTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVE 156
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+GL ++AN L+ +Y C C+ A+ +F ++ +++++SW + I + AL
Sbjct: 157 SGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALEL 215
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M L ++P +TLV LS CA+I + IH+ G+ + AL Y R
Sbjct: 216 FQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALASAYAR 272
Query: 547 CGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G + A F+ + ERDV +WN +L YA+ G + A F +M+
Sbjct: 273 LGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L +G ++AL + M + ++ V ++ C EG+ +H +
Sbjct: 500 NAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRH 559
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALS 182
+ +V + A SM+ + G L A +F K+ +RD+ +N +I Y++ G EAL
Sbjct: 560 SGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALK 619
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTC--GGVPD 212
L+ RM G +PD +F VL C GG+ D
Sbjct: 620 LFWRMQQEGS-RPDEQSFVSVLSACSHGGLAD 650
>gi|302756227|ref|XP_002961537.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
gi|300170196|gb|EFJ36797.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
Length = 675
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 259/559 (46%), Gaps = 60/559 (10%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D D L+R C R EG +H+ +SK S L N + MF +FG + A VF
Sbjct: 1 DADTYAVLIRQCTLARAVPEGRRVHAHISKHGCRDSFLL-NLLVQMFGRFGCVADASRVF 59
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM----------FWVGGVKPDVYTFPCV 203
+ R+ +SWN+++ +A+ G +A + +M + G++ D TF V
Sbjct: 60 DSIPARNCYSWNIMVAAFAQNGHLQQARITFDQMPPSDRSLFALMDLDGIRADTITFVSV 119
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
+ C + + G VHV G E V AL++MY KC L R++ +FD M +R+
Sbjct: 120 IDACSSLRRIDLGIAVHVEARESGTEMHYAVATALVSMYGKCRRLERSKEMFDRMEERNM 179
Query: 264 ISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W AMI+ Y +N + L +F M + PD S + A +GD +GR++H
Sbjct: 180 VTWTAMITAYAQNAQLDWAALEVFDAMEGDGIRPDKCVFVSALEACGALGDLAVGRKIHR 239
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP-- 380
+ +++ V N LI MY G EE VF + ++SW MI+ Y + P
Sbjct: 240 RIATARMEENLIVANGLIAMYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQNGHPRH 299
Query: 381 ------------DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++A+ +++M+ +G P+ +T S+L AC+ L +++ G +H + +
Sbjct: 300 CSIGCPRGIWWAEEALAGFRIMDLDGIQPNRVTFLSILDACSSLASIEFGRVVHACIVDS 359
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFH------------------------------ 458
+ + +L+ M+ +C+ +A FH
Sbjct: 360 CFAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAKNILAWTAILSANALSGHLDAARMLF 419
Query: 459 -QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
Q+P++NVISWT +I + EA F+ M +L +PN +T + L ACA
Sbjct: 420 DQMPERNVISWTGMISAYAYSGHRREAHDLFKAMDLLGQRPNKITYLKALEACAGGITAA 479
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGY 574
+ IHA A+ G + D + LL+++ +CG + A F+ + V AW+I+++ Y
Sbjct: 480 EARTIHAKAIESGYSSDTQVAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWSIMISAY 539
Query: 575 AERGQGALAEEFFRKMIDS 593
A+ G+ + E F +M+ S
Sbjct: 540 AQSGRPWRSLELFTEMVQS 558
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 229/502 (45%), Gaps = 60/502 (11%)
Query: 73 NGSLEQALKYLDSMQELN-----------ICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NG L+QA D M + I D V+++ C R D G+ +H
Sbjct: 80 NGHLQQARITFDQMPPSDRSLFALMDLDGIRADTITFVSVIDACSSLRRIDLGIAVHVEA 139
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EA 180
++ + + + A +SM+ K L + +F +M +R++ +W +I YA+ D A
Sbjct: 140 RESGTEMHYAVATALVSMYGKCRRLERSKEMFDRMEERNMVTWTAMITAYAQNAQLDWAA 199
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L ++ M G++PD F L CG + DL G+++H + E ++ V N LI
Sbjct: 200 LEVFDAMEG-DGIRPDKCVFVSALEACGALGDLAVGRKIHRRIATARMEENLIVANGLIA 258
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE--------------YMKGLMLF 286
MY KCG + AR VFD P+R +SWN MI+ Y +NG + L F
Sbjct: 259 MYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQNGHPRHCSIGCPRGIWWAEEALAGF 318
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
+M + P+ +T S++ A + + GR VH ++ F+ DV V L+ M+
Sbjct: 319 RIMDLDGIQPNRVTFLSILDACSSLASIEFGRVVHACIVDSCFAGDVHVGTSLVTMFGRC 378
Query: 347 GNREEGEK-------------------------------VFSRMESKDVVSWTTMISCYE 375
+ +E + +F +M ++V+SWT MIS Y
Sbjct: 379 EHAQEADAAFHAIVAKNILAWTAILSANALSGHLDAARMLFDQMPERNVISWTGMISAYA 438
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
S +A + ++ M+ G P++IT L ACA +H A+ +G S
Sbjct: 439 YSGHRREAHDLFKAMDLLGQRPNKITYLKALEACAGGITAAEARTIHAKAIESGYSSDTQ 498
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+A L++++ KC + A VF + + K V++W+ +I + R + +L F +M+ +
Sbjct: 499 VAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEMVQS 558
Query: 495 -LKPNSVTLVSILSACARIGAL 515
+ P +T+V++LSAC+ G L
Sbjct: 559 GVMPTEITVVNLLSACSHGGFL 580
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 168/567 (29%), Positives = 284/567 (50%), Gaps = 24/567 (4%)
Query: 37 RHFSSKNAQSVQVLNTQNTSSIATKNPNSR---LNELCLNGSLEQALKYLDSMQELNICV 93
RH+S+ + +++ L +NP S+ + + C +GSL +A+ L+S+ +
Sbjct: 9 RHYSTLASLNLKTL----------ENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSN 58
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYV 152
+L++ C + G+ HS K+ +GN+ L+++ K G +L A V
Sbjct: 59 KPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRV 118
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +DL SW +I GY K ++L L+ M + G++P+ +T V++ C G+ D
Sbjct: 119 FDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGL-GIEPNGFTLSAVIKACSGLGD 177
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK H V+ G++ + + ALI MY + + A LVF +P+ D I W ++IS
Sbjct: 178 LRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISA 237
Query: 273 YFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
+ N Y K L F M R+ + PD T +V++A +G K G+EVH VI G S
Sbjct: 238 FTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSG 297
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V V + L+ MY + + VF RM K++VSWT ++ G + E+ +
Sbjct: 298 NVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALL----GGYCQNGDFESVIRIF 353
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG D + +VL ACA L + G ++H ++ ++ + L+D+Y+KC CID
Sbjct: 354 REGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCID 413
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A +F ++ +N+I+W S+I G N R E F +M+ ++P+ ++ V +L AC+
Sbjct: 414 FAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACS 473
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLP-NALLDMYVRCGRMKPAWNQF-NSNERD-VSAW 567
G + GK+ A + G N ++D+ R G ++ A N N+N RD S W
Sbjct: 474 HAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLW 533
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSK 594
+LL A A AE +K ++ K
Sbjct: 534 TVLLGACAASPHSATAERIAKKAVELK 560
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 205/444 (46%), Gaps = 17/444 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+++L+ M L I + L +++ C G H VV L+ + A
Sbjct: 144 KKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTAL 203
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ + + A VF ++ D W +I + + +D+AL + M G+ PD
Sbjct: 204 IDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPD 263
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+TF VL CG + LK+GKEVH VI G +V V ++L+ MY KC + +++ VFD
Sbjct: 264 GFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFD 323
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M ++ +SW A++ GY +NG++ + +F ++V D + +V+ A + +
Sbjct: 324 RMSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKV----DTYSFGTVLRACAGLAAVRQ 379
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+EVH +K DV + L+ +Y G + ++F RM +++++W +MI +
Sbjct: 380 GKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQ 439
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-----LAMRTGLI 431
+ + + + M EG PD I+ VL AC+ G +D G K ++ G+
Sbjct: 440 NGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIE 499
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
Y N +ID+ + +++A + ++ S +++LG + K
Sbjct: 500 HY----NCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKK 555
Query: 492 MLNLKPNS----VTLVSILSACAR 511
+ LKP+ V L ++ A R
Sbjct: 556 AVELKPDHHLSYVYLANVYRAVGR 579
>gi|449484874|ref|XP_004157004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 881
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 277/577 (48%), Gaps = 35/577 (6%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+S + LCLN ++ L ++ Q D + + C + G L
Sbjct: 10 SSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINVGKALQGYA 69
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EA 180
K + + L+++ + G W +F ++ RD+ +WN+++ GY ++ D +A
Sbjct: 70 VKQGEIVCQSVYKGLLNLYARCGAFDECWKLFEQLNRRDVVTWNIILSGYCRSQIHDTKA 129
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+ +M G VKP T +L C V GK +H V++ G + D V NALI+
Sbjct: 130 IRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALIS 189
Query: 241 MYVKCGD-LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY K G A F+ + +D ++WN +IS E L LF +M E ++P+++
Sbjct: 190 MYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYI 249
Query: 300 TLSSVISASELVGDE---KLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
T++ ++ G+ + G+E+HGY+ + +D+SVCN L+ +YL G EE E +
Sbjct: 250 TIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEIL 309
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACL 412
FS ++ +D+VSW T+IS Y L DK AV+ + + GS PD +T+ SVL ACA
Sbjct: 310 FSHLKQRDLVSWNTLISGYS---LNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYS 366
Query: 413 GNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
NL +G +H +R ++S + N L+ Y+KC + A F I K++ISW S+
Sbjct: 367 QNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSV 426
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ + + L M+ KP+ T++SI++ C + KE+H +++R +
Sbjct: 427 LNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACL 486
Query: 531 AFDGFLP---NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+ P NALLD Y +CG + A F S+ +R++ N +++ Y A
Sbjct: 487 FEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALT 546
Query: 586 FFRKMIDSK-GNW-------------RKLMGLFRKCQ 608
F M ++ W R +GLFR+ Q
Sbjct: 547 IFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 261/523 (49%), Gaps = 45/523 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH-AWYVFGKMCDRDLFSWNVLIGGYA 172
G +HS V K+ +GNA +SM+ K G + A+ F + +D+ +WN +I A
Sbjct: 165 GKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALA 224
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIR-FGY 228
+ +AL L+ M ++P+ T C+L C G + GKE+H ++ R
Sbjct: 225 EKNLMFDALQLFSLMLE-EPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTEL 283
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
D+ V NAL+ +Y++ G + A ++F + +RD +SWN +ISGY N ++++ + F
Sbjct: 284 IEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCK 343
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFG 347
+ + DPD +TL SV+ A + ++G+ +HGY+++ S+D +V N L+ Y
Sbjct: 344 LLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCN 403
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ + FS + SKD++SW ++++ + + + +M E PD TI S+++
Sbjct: 404 DVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIIN 463
Query: 408 AC------------------ACLGNLDLGIKLHQLAM----RTGLISY------------ 433
C ACL D G + + + G+I Y
Sbjct: 464 FCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKR 523
Query: 434 -IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ N++I Y CK + AL +F + + ++ +W +I NN +AL FR++
Sbjct: 524 NLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ +KP++V+++S+L C + + KE H ++ R D +L ALLD Y +CG +
Sbjct: 584 IKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRFE-DVYLDGALLDAYAKCGAVD 642
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A+ F +S+++D+ + +++GYA G G A + F M++S
Sbjct: 643 CAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLES 685
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 228/440 (51%), Gaps = 14/440 (3%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKE 218
D SW+ I E LS++ F G KPD + F + ++C + + GK
Sbjct: 5 DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINVGKA 64
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+ + ++ G V L+ +Y +CG +F+ + +RD ++WN ++SGY +
Sbjct: 65 LQGYAVKQGEIVCQSVYKGLLNLYARCGAFDECWKLFEQLNRRDVVTWNIILSGYCRSQI 124
Query: 279 Y-MKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ K + LF+ M E V P +T++S++ VG +G+ +H +V+K G D V
Sbjct: 125 HDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVG 184
Query: 337 NPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N LI MY G + F+ + KDVV+W T+IS L A++ + +M E
Sbjct: 185 NALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPI 244
Query: 396 MPDEITIASVLSACACLGN---LDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCID 451
P+ ITIA +L CA GN G ++H + RT LI I + N L+++Y + ++
Sbjct: 245 EPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQME 304
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
+A +F + ++++SW ++I G LN++ EA+ F K++ L P+SVTL+S+L ACA
Sbjct: 305 EAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACA 364
Query: 511 RIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWN 568
L GK IH + LR + + D + NAL+ Y +C +K A++ F+ + +D+ +WN
Sbjct: 365 YSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWN 424
Query: 569 ILLTGYAERGQGALAEEFFR 588
+L +AE G +F R
Sbjct: 425 SVLNAFAEFGN---TTQFLR 441
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 245/521 (47%), Gaps = 50/521 (9%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA ++++++ G + A +F + RDL SWN LI GY+ + EA+ + ++
Sbjct: 287 ISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLC 346
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
+G PD T VL C +L+ GK +H +++R D V NAL++ Y KC D+
Sbjct: 347 LGS-DPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDV 405
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS-A 307
A F + +D ISWN++++ + E G + L L +M PD T+ S+I+
Sbjct: 406 KSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIINFC 465
Query: 308 SELVGDEKLGREVHGYVI----------------------KMGFSD-------------D 332
++G K+ +EVH Y + K G D +
Sbjct: 466 ITVLGGCKV-KEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRN 524
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ CN +I Y++ + + +FS M D+ +W MI Y + P A+ ++ ++
Sbjct: 525 LVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQI 584
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G PD ++I S+L C L + L + H + R+ + + L+D Y+KC +D
Sbjct: 585 KGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF-EDVYLDGALLDAYAKCGAVDC 643
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A ++F K+++ +TS+I G ++ EAL F M+ + +KP+ V + SILSAC+
Sbjct: 644 AYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSH 703
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAW 567
G + G I H++ + + + ++D+ R GR+K A++ + D + W
Sbjct: 704 TGLVDQGLNIF-HSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANIW 762
Query: 568 NILLTGYAERGQGAL----AEEFFRKMIDSKGNWRKLMGLF 604
LL + L AE+ F D GN+ + L+
Sbjct: 763 GTLLGACKTHHEVELGLVVAEKLFETKADDIGNYVVMSNLY 803
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V L A L + K G + A+ +F +DL + +I GYA G +EAL ++ M
Sbjct: 625 VYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLE 684
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDL 248
GVKPD +L C + +G + H + ++ ++ + + G +
Sbjct: 685 -SGVKPDHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRI 743
Query: 249 VRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP--DFMTLSSVI 305
A GMP + D W ++ + E GL++ + E D +++ +S++
Sbjct: 744 KDAYSFVIGMPIQPDANIWGTLLGACKTHHEVELGLVVAEKLFETKADDIGNYVVMSNLY 803
Query: 306 SA 307
+A
Sbjct: 804 AA 805
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 230/433 (53%), Gaps = 5/433 (1%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP-DVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+NVL+ + AG ++AL L+ M P D +T C L++C + L G+ V +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
++ G AD V+++LI MY CGD+ ARLVFD + + WNA+++ Y +NG++M+
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ +F M EV V D +TL SV++A +GD KLG+ V G+V + G + + + L+ M
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G + ++F M+S+DVV+W+ MIS Y + +A+ + M+ P+++T+
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SVLSACA LG L+ G +H R L I+ L+D Y+KC CID A+E F +P
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-KE 520
KN +WT++I G+ N R EAL F M ++P VT + +L AC+ + G +
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERG 578
+ A G+ ++D+ R G + A+ + E + W LL+ A
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505
Query: 579 QGALAEEFFRKMI 591
+ EE +++I
Sbjct: 506 NVGIGEEALKQII 518
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 172/341 (50%), Gaps = 3/341 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + M+ GD+ A VF + + WN ++ Y K G + E + +++ M V GV
Sbjct: 159 SSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEV-GV 217
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D T V+ CG + D K GK V HV G + +V AL+ MY KCG++ +AR
Sbjct: 218 AFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARR 277
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FDGM RD ++W+AMISGY + + + L LF M+ V+P+ +T+ SV+SA ++G
Sbjct: 278 LFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGA 337
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ G+ VH YV + S + L+ Y G ++ + F M K+ +WT +I
Sbjct: 338 LETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG 397
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLIS 432
+ +A+E + M G P ++T VL AC+ ++ G + +A G+
Sbjct: 398 MATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKP 457
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ ++D+ + +D+A + +P + N + W +++
Sbjct: 458 RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALL 498
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + ++ M E+ + DE LV++V C G ++ V + + +L
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G++G A +F M RD+ +W+ +I GY +A EAL L+ M +
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEM-QLAR 317
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ T VL C + L+ GK VH +V R + AL+ Y KCG + A
Sbjct: 318 VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
F+ MP ++ +W A+I G NG + L LF MRE ++P +T V+ A
Sbjct: 378 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL MQ + ++ +V+++ C + G ++HS V + L+ LG A +
Sbjct: 305 EALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALV 364
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ K G + A F M ++ ++W LI G A G EAL L+ M G++P
Sbjct: 365 DFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMR-EAGIEPTD 423
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G+ + R +G + V+ ++ + + G + A
Sbjct: 424 VTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIR 483
Query: 257 GMP-KRDRISWNAMIS 271
MP + + + W A++S
Sbjct: 484 TMPIEPNAVIWRALLS 499
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
T L +C+R+ AL G+ + A+A++ G+ D F+ ++L+ MY CG + A F++
Sbjct: 122 TAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAA 181
Query: 561 ERD-VSAWNILLTGYAERGQGALAEEFFRKMID 592
E V WN ++ Y + G E F+ M++
Sbjct: 182 EESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLE 214
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 240/448 (53%), Gaps = 17/448 (3%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
A + +++FG + A+ F +M RD+ +WN ++ G + EA+ L+ RM + GV
Sbjct: 109 ALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV-MEGVA 167
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D T VL C + D +H++ ++ G + ++ V NA+I +Y K G L R V
Sbjct: 168 GDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKV 227
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FDGM RD ++WN++ISG+ + G+ + +F MR+ V PD +TL S+ SA GD
Sbjct: 228 FDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDI 287
Query: 315 KLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR VH Y+++ G+ D+ N ++ MY E +++F M +D VSW T+I+
Sbjct: 288 CGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITG 347
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + L +A+ Y M + EG P + T SVL A + LG L G ++H L+++TGL
Sbjct: 348 YMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL 407
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + +ID+Y+KC +D+A+ +F Q P ++ W ++I G+ ++ +AL F +M
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQ 467
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVR 546
+ P+ VT VS+L+AC+ G + G+ + G P A ++DM+ R
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNF----FNMMQTAYGIKPIAKHYACMVDMFGR 523
Query: 547 CGRMKPAWNQFNSN---ERDVSAWNILL 571
G++ A++ F N + D + W LL
Sbjct: 524 AGQLDDAFD-FIRNMPIKPDSAIWGALL 550
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 207/400 (51%), Gaps = 8/400 (2%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLV 254
D +TFP +LR G ++H +R G D AL+ Y++ G + A
Sbjct: 70 DAFTFPPLLRAAQGP---GTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M RD +WNAM+SG N + + LF M V D +T+SSV+ L+GD
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
L +H Y +K G D++ VCN +I +Y G EE KVF M S+D+V+W ++IS +
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISY 433
E AVE + M G PD +T+ S+ SA A G++ G +H +R G +
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
II N ++DMY+K I+ A +F +P ++ +SW ++I G N + EA+ + M
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366
Query: 494 N--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ LKP T VS+L A + +GAL G +HA +++ G+ D ++ ++D+Y +CG++
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F + R WN +++G G GA A F +M
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQM 466
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKV 355
D T ++ A++ G ++H +++G D L+ YL FG + +
Sbjct: 70 DAFTFPPLLRAAQGPGTAA---QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F M +DV +W M+S + +AV + M EG D +T++SVL C LG+
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
L + +H A++ GL + + N +ID+Y K +++ +VF + +++++W SII G
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-D 533
+ A+ F M + P+ +TL+S+ SA A+ G + G+ +H + +R G D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
NA++DMY + +++ A F+S RD +WN L+TGY + G + A + M
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366
Query: 593 SKGNWRKLMGLF 604
+G + + G F
Sbjct: 367 HEG-LKPIQGTF 377
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 42/368 (11%)
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA + M+ K + A +F M RD SWN LI GY + G EA+ +Y M G
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP TF VL + L++G +H I+ G DV V +I +Y KCG L A
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAM 429
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
L+F+ P+R WNA+ISG +G K L LF M++ + PD +T S+++A G
Sbjct: 430 LLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAG 489
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR N M ++G + + + M+
Sbjct: 490 LVDQGR------------------NFFNMMQTAYGIKPIAKH------------YACMVD 519
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ--LAMRTGL 430
+ + D A + + M + PD ++L AC GN+++G Q +
Sbjct: 520 MFGRAGQLDDAFDFIRNMPIK---PDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKN 576
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ Y ++ + + K +D+ + + + W+SI + +N +F+
Sbjct: 577 VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVN-------VFYSG 629
Query: 491 MMLNLKPN 498
+N+ P
Sbjct: 630 NQMNIHPQ 637
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 4/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQEL-NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + NG +A+ D MQ+ + + V+++ +G +H++
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
KT +L V +G + ++ K G L A +F + R WN +I G G +ALS
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALS 461
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITM 241
L+ +M G+ PD TF +L C + +G+ ++ +G + ++ M
Sbjct: 462 LFSQM-QQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMI 270
+ + G L A MP K D W A++
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALL 550
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 238/455 (52%), Gaps = 1/455 (0%)
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
F G + H +F K+ DLF +NVLI G++ G ++ LY + ++PD +T
Sbjct: 56 FFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFT 115
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ + + D + G +H H I G +++ V +A++ +Y K AR VFD MP
Sbjct: 116 YAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP 175
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
+RD + WN MISG+ N + + +F+ M +V + D TL++V++A + + +LG
Sbjct: 176 ERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMG 235
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+ K G DV V LI +Y G +G +F +++ D++S+ MIS Y +
Sbjct: 236 IQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHE 295
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+ AV ++ + A G + T+ ++ +L L + L+++ G+I ++
Sbjct: 296 TESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTA 355
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
L +Y + + A ++F + P+K++ SW ++I G N + A+ F++MM L PN
Sbjct: 356 LTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNP 415
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN- 558
VT+ SILSACA++GAL GK +H + + ++ AL+DMY +CG + A F+
Sbjct: 416 VTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDL 475
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+++V WN ++TGY G G A + F +M+ S
Sbjct: 476 MVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 228/444 (51%), Gaps = 12/444 (2%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ HS+V S+L V G+A + ++ KF A VF M +RD WN +I G+++
Sbjct: 135 LHAHSIVDGVASNLFV--GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
+F++++ ++ M V G+ D T VL + + + G + + G +DV V
Sbjct: 193 SYFEDSIRVFVDMLDV-GLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ LI++Y KCG + R++FD + + D IS+NAMISGY N E + LF RE+L
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLF---RELLA 308
Query: 295 DPDFM---TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ TL +I +L R + +K+G SV L +Y +
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++F K + SW MIS Y + L D+A+ +Q M + S P+ +T+ S+LSACA
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSACAQ 427
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG L +G +H L L S + ++ L+DMY+KC I +A ++F + DKNV++W ++
Sbjct: 428 LGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIG 529
I G L+ EAL F +M+ + + P VT +SIL AC+ G + G EI H+ A G
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA 553
++D+ R G++ A
Sbjct: 548 FQPMSEHYACMVDILGRAGQLTNA 571
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 203/445 (45%), Gaps = 3/445 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ N E +++ M ++ + D L ++ + Y G+ + + SK
Sbjct: 183 NTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK 242
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H V + +S++ K G +F ++ DL S+N +I GY + A++L
Sbjct: 243 KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTL 302
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ + G + + T ++ L+ + + ++ G V AL T+Y
Sbjct: 303 FRELL-ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ ++ AR +FD P++ SWNAMISGY +NG + + LF M L P+ +T++S
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQL-SPNPVTVTS 420
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++SA +G +G+ VHG + +V V L+ MY G+ E ++F M K+
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-H 422
VV+W MI+ Y +A++ + M G P +T S+L AC+ G + G ++ H
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+A G ++D+ + + ALE ++P + + +LG + +++
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600
Query: 483 EALIFFRKMMLNLKPNSVTLVSILS 507
E K + L P +V +LS
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLS 625
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 241/465 (51%), Gaps = 14/465 (3%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M R++ SWN LI GY + GF+ E ++L++ + ++ D +TF L CG DL+
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEA-RMSDLRLDKFTFSNALSVCGRTLDLRL 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ +H + G V + N+LI MY KCG + ARLVF+ + D +SWN++I+GY
Sbjct: 60 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISA--SELVGDEKLGREVHGYVIKMGFSDDV 333
G + L L + M ++ + L S + A S + G+ +HG +K+G DV
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-----EGSVLPDKAVETYQ 388
V L+ Y G+ E+ K+F M +VV + MI+ + ++A+ +
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M++ G P E T +S+L AC+ + + G ++H + L S I N L+++YS
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE-ALIFFRKMMLN-LKPNSVTLVSIL 506
I+ L+ FH P +V+SWTS+I+G + N FE L F +++ + KP+ T+ +L
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVG-HVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVS 565
SACA + A+ G++IHA+A++ G+ + N+ + MY +CG + A F + D+
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
+W+++++ A+ G A + F M S N +G+ C
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS 463
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 238/496 (47%), Gaps = 20/496 (4%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D+ N + +C G +H++++ + V L N+ + M+ K G + A V
Sbjct: 39 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 98
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG--V 210
F + D SWN LI GY + G DE L L +M G+ + Y L+ CG
Sbjct: 99 FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFS 157
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
++ GK +H ++ G + DV V AL+ Y K GDL A +F MP + + +NAMI
Sbjct: 158 SSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 217
Query: 271 SGYFE----NGEYM-KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+G+ + E+ + + LF M+ + P T SS++ A + + G+++H +
Sbjct: 218 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 277
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K D + N L+++Y G+ E+G K F DVVSWT++I + + + +
Sbjct: 278 KYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 337
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ + G PDE TI+ +LSACA L + G ++H A++TG+ ++ II N+ I MY+
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
KC ID A F + + +++SW+ +I + + EA+ F M + PN +T +
Sbjct: 398 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 457
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNS 559
+L AC+ G + G I G PN ++D+ R GR+ A +
Sbjct: 458 VLVACSHGGLVEEG----LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMD 513
Query: 560 N--ERDVSAWNILLTG 573
+ E D W LL+
Sbjct: 514 SGFEGDPVMWRSLLSA 529
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 178/358 (49%), Gaps = 8/358 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLC--EWKRGYDEGLYLHSVVSKTMSHLSVR 131
GS ++ L+ L M + ++ AL + ++ C + + G LH K L V
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-----FFDEALSLYQR 186
+G A L + K GDL A +F M D ++ +N +I G+ + F +EA+ L+
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G+KP +TF +L+ C + + GK++H + ++ ++D + NAL+ +Y G
Sbjct: 241 M-QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ F PK D +SW ++I G+ +NG++ GL LF + PD T+S ++S
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + K G ++H Y IK G + + N I MY G+ + F ++ D+VS
Sbjct: 360 ACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVS 419
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
W+ MIS +AV+ +++M+ G P+ IT VL AC+ G ++ G++ ++
Sbjct: 420 WSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 477
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 235/466 (50%), Gaps = 12/466 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + K+ V +G A + MFVK + +A VF +M +RD +WN ++ G+ ++G
Sbjct: 680 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 739
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+A SL++ M + + PD T ++++ LK + +H IR G + V V N
Sbjct: 740 TDKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 798
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
I+ Y KCGDL A+LVF+ + + DR +SWN+M Y GE L+ +M
Sbjct: 799 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 858
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T ++ ++ + GR +H + I +G D+ N I MY +
Sbjct: 859 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 918
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M S+ VSWT MIS Y D+A+ + M G PD +T+ S++S C G+
Sbjct: 919 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 978
Query: 415 LDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G + A G ++I N LIDMYSKC I +A ++F P+K V++WT++I
Sbjct: 979 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 1038
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIG 529
G LN EAL F KM+ L+ KPN +T +++L ACA G+L G E I I
Sbjct: 1039 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 1098
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTG 573
D + + ++D+ R G+++ A S + D W LL
Sbjct: 1099 PGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 1142
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 228/454 (50%), Gaps = 12/454 (2%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+WN+ I E+L L++ M GG +P+ +TFP V + C + D+ + VH H
Sbjct: 625 AWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 683
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I+ + +DV V A + M+VKC + A VF+ MP+RD +WNAM+SG+ ++G K
Sbjct: 684 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 743
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
LF MR + PD +T+ ++I ++ KL +H I++G V+V N I
Sbjct: 744 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 803
Query: 343 YLSFGNREEGEKVFSRMESKD--VVSWTTMISCYEGSVLPD--KAVETYQMMEAEGSMPD 398
Y G+ + + VF ++ D VVSW +M Y SV + A Y +M E PD
Sbjct: 804 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY--SVFGEAFDAFGLYCLMLREEFKPD 861
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T ++ ++C L G +H A+ G I NT I MYSK + A +F
Sbjct: 862 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 921
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+ + +SWT +I G EAL F M+ + KP+ VTL+S++S C + G+L
Sbjct: 922 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 981
Query: 518 GKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYA 575
GK I A A G D + NAL+DMY +CG + A + F N+ E+ V W ++ GYA
Sbjct: 982 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 1041
Query: 576 ERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
G A + F KMI D K N + + + C
Sbjct: 1042 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 1075
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C +G ++A M+ I D ++ L++ +++ +H+V +
Sbjct: 728 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 787
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEAL 181
+ V + N ++S + K GDL A VF + DR + SWN + Y+ G +A
Sbjct: 788 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 847
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY M KPD+ TF + +C L +G+ +H H I G + D++ +N I+M
Sbjct: 848 GLYCLML-REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 906
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K D ARL+FD M R +SW MISGY E G+ + L LF M + PD +TL
Sbjct: 907 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 966
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+IS G + G+ + G D+V +CN LI MY G+ E +F
Sbjct: 967 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 1026
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K VV+WTTMI+ Y + + +A++ + M P+ IT +VL ACA G+L+ G +
Sbjct: 1027 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 1086
Query: 421 LHQLAMRT-----GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + GL Y + ++D+ + +++ALE+ + PD + W +++
Sbjct: 1087 YFHIMKQVYNISPGLDHY----SCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALL 1140
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSAC------ARIGALMCGKEI 521
++ +R+ + + + NL+P V + +I +A ARI ++M + I
Sbjct: 1141 NACKI-HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 1198
>gi|46390434|dbj|BAD15896.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125583606|gb|EAZ24537.1| hypothetical protein OsJ_08298 [Oryza sativa Japonica Group]
Length = 646
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 254/496 (51%), Gaps = 2/496 (0%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K+ ++ + L G + ++ M+ + V L +++ C R +H++
Sbjct: 126 KSASAAIVALAHAGRHAEVVELFCRMRRGGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 185
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V K V +G A + + FG + A F ++ D ++ SW+VLIGGYA++ ++E
Sbjct: 186 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 245
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M GV P+ ++ CG + L GK++H + G++ + V N L+
Sbjct: 246 LDAFSAMRR-AGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMD 304
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCGD+ ++VF+ M RD++SWN +IS Y G + L + + M+E D T
Sbjct: 305 MYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFT 364
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L S ++A + D GR HGY+++ DV + L+ MY N E VF RM+
Sbjct: 365 LGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMD 424
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++ VSW ++S Y + D A+E ++ M ++ A++L C + G +
Sbjct: 425 ERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQ 484
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A++T +++ LIDMY+KC CI+ A +F ++ ++N+ISW +++ G + +
Sbjct: 485 IHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQ 544
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ +R+M L ++P+ TL +LS C G L G++IHAH +++G + +
Sbjct: 545 PVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTI 604
Query: 540 LLDMYVRCGRMKPAWN 555
L+ MY++C R + A N
Sbjct: 605 LVHMYIKCMRQQDAEN 620
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 218/430 (50%), Gaps = 3/430 (0%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
S + I A AG E + L+ RM GGV + P VL C G+ D+ + VH
Sbjct: 127 SASAAIVALAHAGRHAEVVELFCRMRR-GGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 185
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
VI+ G V V AL+ Y G + AR FD + + +SW+ +I GY + + +
Sbjct: 186 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 245
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L F MR V P+ L I A +G G+++HG + +GF + +V N L+ M
Sbjct: 246 LDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMDM 305
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G+ + + VF M +D VSW T+IS Y L ++A++ M+ G + D T+
Sbjct: 306 YGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFTL 365
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
S ++ACA L ++D G H +R L + +I + L+DMY KC ++ A VF ++ +
Sbjct: 366 GSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDE 425
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+N +SW +++ G N + AL FR+M N+K N ++L C G++I
Sbjct: 426 RNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQI 485
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQG 580
H HA++ + L L+DMY +CG ++ A F NER++ +WN LL+GYA GQ
Sbjct: 486 HGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQP 545
Query: 581 ALAEEFFRKM 590
+R+M
Sbjct: 546 VATINIYRQM 555
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 7/391 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ L +M+ + ++ LV ++ C G LH + + + N
Sbjct: 243 EETLDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCL 302
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K GD+ VF M RD SWN LI YA+ G +EAL + +M G + D
Sbjct: 303 MDMYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYI-VD 361
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T + C + D+ G+ H +++R + DV +AL+ MY KC ++ A +VFD
Sbjct: 362 RFTLGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFD 421
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ +SW+A++SGY EN + L +F M + + ++++ +L G ++
Sbjct: 422 RMDERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLL---KLCGSQRY 478
Query: 317 ---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++HG+ IK +V + LI MY G E +F RM ++++SW ++S
Sbjct: 479 KEYGRQIHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSG 538
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y P + Y+ ME PD+ T+A +LS C G L G ++H ++ G
Sbjct: 539 YAADGQPVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMN 598
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+++ L+ MY KC A V I ++N
Sbjct: 599 VVMQTILVHMYIKCMRQQDAENVCIMIEERN 629
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G E+AL + MQE VD L + V C D G H + +
Sbjct: 331 NTLISSYARVGLCEEALDMIVQMQESGYIVDRFTLGSGVTACARLADIDSGRAFHGYLVR 390
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V G+A + M+ K ++ A VF +M +R+ SW+ L+ GY + D AL +
Sbjct: 391 RLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDERNYVSWDALLSGYVENEQVDLALEI 450
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M +K + + F +L+ CG + G+++H H I+ + +V + LI MY
Sbjct: 451 FRQM-GCANIKYNQHNFANLLKLCGSQRYKEYGRQIHGHAIKTINKMNVVLETELIDMYA 509
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + ARL+F M +R+ ISWNA++SGY +G+ + + ++ M + PD TL+
Sbjct: 510 KCGCIEVARLLFLRMNERNLISWNALLSGYAADGQPVATINIYRQMELACIRPDKYTLAG 569
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S G GR++H ++IKMG +V + L+ MY+ +++ E V +E ++
Sbjct: 570 LLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTILVHMYIKCMRQQDAENVCIMIEERN 629
>gi|115448537|ref|NP_001048048.1| Os02g0735800 [Oryza sativa Japonica Group]
gi|113537579|dbj|BAF09962.1| Os02g0735800, partial [Oryza sativa Japonica Group]
Length = 645
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 254/496 (51%), Gaps = 2/496 (0%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K+ ++ + L G + ++ M+ + V L +++ C R +H++
Sbjct: 125 KSASAAIVALAHAGRHAEVVELFCRMRRGGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 184
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V K V +G A + + FG + A F ++ D ++ SW+VLIGGYA++ ++E
Sbjct: 185 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 244
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M GV P+ ++ CG + L GK++H + G++ + V N L+
Sbjct: 245 LDAFSAMRR-AGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMD 303
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCGD+ ++VF+ M RD++SWN +IS Y G + L + + M+E D T
Sbjct: 304 MYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFT 363
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L S ++A + D GR HGY+++ DV + L+ MY N E VF RM+
Sbjct: 364 LGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMD 423
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++ VSW ++S Y + D A+E ++ M ++ A++L C + G +
Sbjct: 424 ERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQ 483
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A++T +++ LIDMY+KC CI+ A +F ++ ++N+ISW +++ G + +
Sbjct: 484 IHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQ 543
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ +R+M L ++P+ TL +LS C G L G++IHAH +++G + +
Sbjct: 544 PVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTI 603
Query: 540 LLDMYVRCGRMKPAWN 555
L+ MY++C R + A N
Sbjct: 604 LVHMYIKCMRQQDAEN 619
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 218/430 (50%), Gaps = 3/430 (0%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
S + I A AG E + L+ RM GGV + P VL C G+ D+ + VH
Sbjct: 126 SASAAIVALAHAGRHAEVVELFCRMRR-GGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 184
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
VI+ G V V AL+ Y G + AR FD + + +SW+ +I GY + + +
Sbjct: 185 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 244
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L F MR V P+ L I A +G G+++HG + +GF + +V N L+ M
Sbjct: 245 LDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMDM 304
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G+ + + VF M +D VSW T+IS Y L ++A++ M+ G + D T+
Sbjct: 305 YGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFTL 364
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
S ++ACA L ++D G H +R L + +I + L+DMY KC ++ A VF ++ +
Sbjct: 365 GSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDE 424
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+N +SW +++ G N + AL FR+M N+K N ++L C G++I
Sbjct: 425 RNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQI 484
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQG 580
H HA++ + L L+DMY +CG ++ A F NER++ +WN LL+GYA GQ
Sbjct: 485 HGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQP 544
Query: 581 ALAEEFFRKM 590
+R+M
Sbjct: 545 VATINIYRQM 554
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 7/391 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ L +M+ + ++ LV ++ C G LH + + + N
Sbjct: 242 EETLDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCL 301
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K GD+ VF M RD SWN LI YA+ G +EAL + +M G + D
Sbjct: 302 MDMYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYI-VD 360
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T + C + D+ G+ H +++R + DV +AL+ MY KC ++ A +VFD
Sbjct: 361 RFTLGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFD 420
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ +SW+A++SGY EN + L +F M + + ++++ +L G ++
Sbjct: 421 RMDERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLL---KLCGSQRY 477
Query: 317 ---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++HG+ IK +V + LI MY G E +F RM ++++SW ++S
Sbjct: 478 KEYGRQIHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSG 537
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y P + Y+ ME PD+ T+A +LS C G L G ++H ++ G
Sbjct: 538 YAADGQPVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMN 597
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+++ L+ MY KC A V I ++N
Sbjct: 598 VVMQTILVHMYIKCMRQQDAENVCIMIEERN 628
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G E+AL + MQE VD L + V C D G H + +
Sbjct: 330 NTLISSYARVGLCEEALDMIVQMQESGYIVDRFTLGSGVTACARLADIDSGRAFHGYLVR 389
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V G+A + M+ K ++ A VF +M +R+ SW+ L+ GY + D AL +
Sbjct: 390 RLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDERNYVSWDALLSGYVENEQVDLALEI 449
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M +K + + F +L+ CG + G+++H H I+ + +V + LI MY
Sbjct: 450 FRQM-GCANIKYNQHNFANLLKLCGSQRYKEYGRQIHGHAIKTINKMNVVLETELIDMYA 508
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + ARL+F M +R+ ISWNA++SGY +G+ + + ++ M + PD TL+
Sbjct: 509 KCGCIEVARLLFLRMNERNLISWNALLSGYAADGQPVATINIYRQMELACIRPDKYTLAG 568
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S G GR++H ++IKMG +V + L+ MY+ +++ E V +E ++
Sbjct: 569 LLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTILVHMYIKCMRQQDAENVCIMIEERN 628
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 239/455 (52%), Gaps = 4/455 (0%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K + A VF + +++FSW +++ Y++ G + EAL L+ RM W G +PD
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEG-TRPDKV 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F L C +L G+++H V+ G +++ + N+L+ MY KC D+ A VFDGM
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD +SW AM++ Y +NG + + L M V P+ +T +++ + LGR
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +I G D + N L+ MY S G+ ++ + VFSRM V+ WTTMI+ +
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++ + ++ M+ EG +E+T S++ C L + G + + + S ++A
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
+LI +Y +C +D+A + + ++V++W +++ N ++EA+ R+M M
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT +S+L ACA + AL G+EIHA L G + + + N+++ MY +CG+ + A +
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419
Query: 557 FNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
F + R D +WN ++ + A E F M
Sbjct: 420 FEAMPRKDDVSWNAVINASVGNSKFQDALELFHGM 454
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 262/524 (50%), Gaps = 7/524 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ MQ D+ V + C D G +HS V + ++ +
Sbjct: 36 NGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIII 95
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ ++M+ K D+ A VF M RD+ SW ++ YA+ G + +AL RM G
Sbjct: 96 SNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMD-AEG 154
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP+ TF ++ C + L G+++H +I G E D + NAL+ MY CG +
Sbjct: 155 VKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMK 214
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF M + + W MI+G +NG+Y +GL++F M V + +T S++ +
Sbjct: 215 SVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLD 274
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G + +++ F + LI +Y G + + + M +DVV+W M++
Sbjct: 275 AVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVT 334
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ +A+ + M+ EG +++T SVL ACA L L G ++H + GL+
Sbjct: 335 ACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQ 394
Query: 433 Y-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N++I MY KC + A+ VF +P K+ +SW ++I N++ +AL F M
Sbjct: 395 REVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGM 454
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGR 549
L L+ N TL+S+L AC + L ++IHA A G + + N++++MY RCG
Sbjct: 455 ELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGS 514
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAER--GQGALAEEFFRKM 590
+ A F+S E+ + AW+I+L YA+ G G A +FF++M
Sbjct: 515 LLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEM 558
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 270/550 (49%), Gaps = 23/550 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+ L M + +E +++V +C EG + + + ++ S L
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLL 297
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +S++ + G L A + M RD+ +WN ++ A+ G EA+ L +RM + G
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMD-MEG 356
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRA 251
+ T+ VL C + L +G+E+H V+ G + +V V N++ITMY KCG A
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ MP++D +SWNA+I+ N ++ L LF M + + TL S++ A +
Sbjct: 417 MSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGL 476
Query: 312 GDEKLGREVH-GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
D KL R++H + +V N ++ MY G+ + +K F +E K +V+W+ +
Sbjct: 477 EDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSII 536
Query: 371 ISCYEGSV--LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
++ Y S +A + +Q MEAEG P E+T S L ACA + L+ G +H+ A +
Sbjct: 537 LAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAAS 596
Query: 429 GLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + + +++ NT+I+MY KC A VF Q+P+K +ISW S+I+ N + EAL
Sbjct: 597 GFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSS 656
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LL 541
++M+L P+S T VSIL + G L G E R + G P++ L+
Sbjct: 657 LQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVE----HFRSSIQDHGLEPSSGQLKCLV 712
Query: 542 DMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG---YAERGQGA-LAEEFFRKMIDSK 594
D+ R G + A ++ + D AW LL Y + +G AE F
Sbjct: 713 DLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHS 772
Query: 595 GNWRKLMGLF 604
G++ L L+
Sbjct: 773 GSFVVLANLY 782
>gi|125541042|gb|EAY87437.1| hypothetical protein OsI_08845 [Oryza sativa Indica Group]
Length = 644
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 254/496 (51%), Gaps = 2/496 (0%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K+ ++ + L G + ++ M+ + V L +++ C R +H++
Sbjct: 124 KSASAAIVALAHAGRHAEVVELFCRMRRGGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 183
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V K V +G A + + FG + A F ++ D ++ SW+VLIGGYA++ ++E
Sbjct: 184 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 243
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L + M GV P+ ++ CG + L GK++H + G++ + V N L+
Sbjct: 244 LDAFSAMRR-AGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMD 302
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCGD+ ++VF+ M RD++SWN +IS Y G + L + + M+E D T
Sbjct: 303 MYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFT 362
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L S ++A + D GR HGY+++ DV + L+ MY N E VF RM+
Sbjct: 363 LGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMD 422
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
++ VSW ++S Y + D A+E ++ M ++ A++L C + G +
Sbjct: 423 ERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQ 482
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A++T +++ LIDMY+KC CI+ A +F ++ ++N+ISW +++ G + +
Sbjct: 483 IHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQ 542
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ +R+M L ++P+ TL +LS C G L G++IHAH +++G + +
Sbjct: 543 PVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTI 602
Query: 540 LLDMYVRCGRMKPAWN 555
L+ MY++C R + A N
Sbjct: 603 LVHMYIKCMRQQDAEN 618
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 218/430 (50%), Gaps = 3/430 (0%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
S + I A AG E + L+ RM GGV + P VL C G+ D+ + VH
Sbjct: 125 SASAAIVALAHAGRHAEVVELFCRMRR-GGVPVSRFVLPSVLAACAGLRDIGMLRAVHAL 183
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
VI+ G V V AL+ Y G + AR FD + + +SW+ +I GY + + +
Sbjct: 184 VIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDEITDANIVSWSVLIGGYARSSRWEET 243
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L F MR V P+ L I A +G G+++HG + +GF + +V N L+ M
Sbjct: 244 LDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCLMDM 303
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G+ + + VF M +D VSW T+IS Y L ++A++ M+ G + D T+
Sbjct: 304 YGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFTL 363
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
S ++ACA L ++D G H +R L + +I + L+DMY KC ++ A VF ++ +
Sbjct: 364 GSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDE 423
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+N +SW +++ G N + AL FR+M N+K N ++L C G++I
Sbjct: 424 RNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQI 483
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQG 580
H HA++ + L L+DMY +CG ++ A F NER++ +WN LL+GYA GQ
Sbjct: 484 HGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQP 543
Query: 581 ALAEEFFRKM 590
+R+M
Sbjct: 544 VATINIYRQM 553
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 7/391 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ L +M+ + ++ LV ++ C G LH + + + N
Sbjct: 241 EETLDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHGKQLHGLAVVLGFDRNATVWNCL 300
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K GD+ VF M RD SWN LI YA+ G +EAL + +M G + D
Sbjct: 301 MDMYGKCGDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYI-VD 359
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T + C + D+ G+ H +++R + DV +AL+ MY KC ++ A +VFD
Sbjct: 360 RFTLGSGVTACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFD 419
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +R+ +SW+A++SGY EN + L +F M + + ++++ +L G ++
Sbjct: 420 RMDERNYVSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLL---KLCGSQRY 476
Query: 317 ---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
GR++HG+ IK +V + LI MY G E +F RM ++++SW ++S
Sbjct: 477 KEYGRQIHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSG 536
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y P + Y+ ME PD+ T+A +LS C G L G ++H ++ G
Sbjct: 537 YAADGQPVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMN 596
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+++ L+ MY KC A V I ++N
Sbjct: 597 VVMQTILVHMYIKCMRQQDAENVCIMIEERN 627
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G E+AL + MQE VD L + V C D G H + +
Sbjct: 329 NTLISSYARVGLCEEALDMIVQMQESGYIVDRFTLGSGVTACARLADIDSGRAFHGYLVR 388
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V G+A + M+ K ++ A VF +M +R+ SW+ L+ GY + D AL +
Sbjct: 389 RLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDERNYVSWDALLSGYVENEQVDLALEI 448
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M +K + + F +L+ CG + G+++H H I+ + +V + LI MY
Sbjct: 449 FRQM-GCANIKYNQHNFANLLKLCGSQRYKEYGRQIHGHAIKTINKMNVVLETELIDMYA 507
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + ARL+F M +R+ ISWNA++SGY +G+ + + ++ M + PD TL+
Sbjct: 508 KCGCIEVARLLFLRMNERNLISWNALLSGYAADGQPVATINIYRQMELACIRPDKYTLAG 567
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S G GR++H ++IKMG +V + L+ MY+ +++ E V +E ++
Sbjct: 568 LLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTILVHMYIKCMRQQDAENVCIMIEERN 627
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 274/594 (46%), Gaps = 91/594 (15%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+L++LC + + LH ++ KT+ L N ++ + K G+L +A +VF +
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 159 RDLFSWNVL-------------------------------IGGYAKAGFFDEALSLYQRM 187
+LFSWN + I GYA G +A+ +Y+ M
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+ + TF +L C + G++++ +++FG+ +DV V + L+ MY K G
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 248 LVRARLVFDGMPKR-------------------------------DRISWNAMISGYFEN 276
+ A+ FD MP+R D ISW MI+G +N
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + L +F MR D T SV++A + G+++H YVI+ D+V V
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ L+ MY + + E VF RM K+V+SWT M+ Y + ++AV+ + M+ G
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD+ T+ SV+S+CA L +L+ G + H A+ +GLIS+I ++N LI +Y KC + + +
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F ++ ++ +SWT+++ G ++ E + F +M+ + LKP+ VT + +LSAC+R G +
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488
Query: 516 MCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
G + ++ G +P ++D+ R GR++ A N N+ DV W
Sbjct: 489 EKGLQYFESMIKE----HGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWA 544
Query: 569 ILLTGYAERG-----------------QGALAEEFFRKMIDSKGNWRKLMGLFR 605
LL+ G Q + + SKG W K+ L R
Sbjct: 545 TLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRR 598
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 222/457 (48%), Gaps = 65/457 (14%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ +L+ C + + K++H +++ + + + N LIT Y K G+L A VFD +P
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 260 K-------------------------------RDRISWNAMISGYFENGEYMKGLMLF-I 287
+ RD +SWN ISGY G + ++ +
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M+++ ++ + +T S+++ LGR+++G ++K GF DV V +PL+ MY G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 348 -----NR--------------------------EEGEKVFSRMESKDVVSWTTMISCYEG 376
R EE +++F ++ +D +SWT MI+
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ L +A++ ++ M G D+ T SVL+AC L L G ++H +RT + +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ L+DMYSKC+ I A VF ++P KNVISWT++++G N S EA+ F +M N +
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P+ TL S++S+CA + +L G + H AL G+ + NAL+ +Y +CG + +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F N RD +W LL GYA+ G+ F +M+
Sbjct: 428 LFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERML 464
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 199/385 (51%), Gaps = 14/385 (3%)
Query: 96 DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
D L + + KR +DE M +V + N ++ ++ G + + +F
Sbjct: 181 DMYTKLGLIYDAKRYFDE-----------MPERNVVMCNTMITGLMRCGMIEESQRLFCG 229
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+ +RD SW ++I G + G EAL +++ M + G D +TF VL CG + L
Sbjct: 230 LKERDSISWTIMITGLMQNGLEREALDMFREM-RLAGFAMDQFTFGSVLTACGSLLALGE 288
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK++H +VIR ++ +V V +AL+ MY KC + A VF MP+++ ISW AM+ GY +
Sbjct: 289 GKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQ 348
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + + +F M+ V+PD TL SVIS+ + + G + H + G ++V
Sbjct: 349 NGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITV 408
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N LI +Y G+ E ++F+ M +D VSWT +++ Y ++ + ++ M A G
Sbjct: 409 SNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGL 468
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKAL 454
PD +T VLSAC+ G ++ G++ + ++ G++ + +ID+ + +++A
Sbjct: 469 KPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEAR 528
Query: 455 EVFHQIP-DKNVISWTSIILGLRLN 478
+ +P +V+ W +++ R++
Sbjct: 529 NFINNMPCHPDVVGWATLLSSCRVH 553
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 3/302 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL M+ +D+ +++ C EG +H+ V +T +V +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A + M+ K + A VF +M +++ SW ++ GY + GF +EA+ ++ M G
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEM-QRNG 366
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PD +T V+ +C + L+ G + H + G + + V NALIT+Y KCG +
Sbjct: 367 VEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSH 426
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F M RD +SW A+++GY + G+ + + LF M + PD +T V+SA G
Sbjct: 427 RLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486
Query: 313 DEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTM 370
+ G + +IK G V C +I + G EE + M DVV W T+
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546
Query: 371 IS 372
+S
Sbjct: 547 LS 548
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 250/515 (48%), Gaps = 53/515 (10%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
L++ L + +S ++ G L HA + + D ++ WN LI Y G ++ L L+
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M + PD YTFP V + CG + ++ G+ H + G+ ++V V NAL+ MY +C
Sbjct: 117 LMHSLSWT-PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC 175
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSV 304
L AR VFD M D +SWN++I Y + G+ L +F M E PD +TL +V
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ +G LG+++H + + ++ V N L+ MY G +E VFS M KDV
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV 295
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAE------------------------------- 393
VSW M++ Y + AV ++ M+ E
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 394 ----GSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-------TGLISYIIIANTLID 442
G P+E+T+ SVLS CA +G L G ++H A++ G ++ N LID
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 443 MYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMM---LNLKP 497
MY+KCK +D A +F + +++V++WT +I G + + +AL +M +P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T+ L ACA + AL GK+IHA+ALR A F+ N L+DMY +CG + A
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F N ++ W L+TGY G G A F +M
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 210/447 (46%), Gaps = 53/447 (11%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P + C + +K +H ++ FG +++ + LI+ Y+ G L A + P
Sbjct: 32 PPFIHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 261 RDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D WN++I Y +NG K L LF +M + PD T V A + + G
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
H + GF +V V N L+ MY + + KVF M DVVSW ++I Y
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 379 LPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
P A+E + M E G PD IT+ +VL CA LG LG +LH A+ + +I + +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM------ 491
N L+DMY+KC +D+A VF + K+V+SW +++ G R +A+ F KM
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 492 ----------------------------MLN--LKPNSVTLVSILSACARIGALMCGKEI 521
ML+ +KPN VTL+S+LS CA +GALM GKEI
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 522 HAHALRI-------GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILL 571
H +A++ G + + N L+DMY +C ++ A F+S ERDV W +++
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 572 TGYAERGQGALAEEFFRKMIDSKGNWR 598
GY++ G A E +M + R
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTR 474
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 249/563 (44%), Gaps = 57/563 (10%)
Query: 44 AQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVR 103
+ +V +L S + NS + NG + L M L+ D + +
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFK 135
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
C G H++ T +V +GNA ++M+ + L A VF +M D+ S
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I YAK G AL ++ RM G +PD T VL C + GK++H
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ ++ V N L+ MY KCG + A VF M +D +SWNAM++GY + G + +
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 284 MLFIMMREVLVD-----------------------------------PDFMTLSSVISAS 308
LF M+E + P+ +TL SV+S
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 309 ELVGDEKLGREVHGYVIKM-------GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
VG G+E+H Y IK G D+ V N LI MY + +F +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 362 K--DVVSWTTMISCYEGSVLPDKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDL 417
K DVV+WT MI Y +KA+E M E + P+ TI+ L ACA L L +
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 418 GIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H A+R + + ++N LIDMY+KC I A VF + KN ++WTS++ G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
++ EAL F +M + K + VTL+ +L AC+ G + G E + R+ F G
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVF-GV 611
Query: 536 LPN-----ALLDMYVRCGRMKPA 553
P L+D+ R GR+ A
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAA 634
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 53/468 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLH--SV 120
NS + G + AL+ M E D LVN++ C + G LH +V
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
S+ + ++ V GN + M+ K G + A VF M +D+ SWN ++ GY++ G F++A
Sbjct: 257 TSEMIQNMFV--GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 181 LSLYQRM----------FWVG------------------------GVKPDVYTFPCVLRT 206
+ L+++M W G+KP+ T VL
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 207 CGGVPDLKRGKEVHVHVIRF-------GYEADVDVVNALITMYVKCGDLVRARLVFDGM- 258
C V L GKE+H + I++ G+ + V+N LI MY KC + AR +FD +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 259 PK-RDRISWNAMISGYFENGEYMKGLMLFIMMRE--VLVDPDFMTLSSVISASELVGDEK 315
PK RD ++W MI GY ++G+ K L L M E P+ T+S + A + +
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 316 LGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+G+++H Y ++ + + V N LI MY G+ + VF M +K+ V+WT++++ Y
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY 554
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISY 433
++A+ + M G D +T+ VL AC+ G +D G++ +++ G+
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
L+D+ + ++ AL + ++P + + W + + R++ +
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 378 VLPDKAVETYQMMEAE--GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++P+ A +++Q ++ + EIT + C + + L +HQ + G+++ +
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAPEIT-PPFIHKCKTISQVKL---IHQKLLSFGILT-LN 60
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + LI Y C+ A+ + + P D V W S+I N + + L F M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L+ P++ T + AC I ++ CG+ HA +L G + F+ NAL+ MY RC +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
A F+ + DV +WN ++ YA+ G+ +A E F +M + G
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 173/575 (30%), Positives = 279/575 (48%), Gaps = 44/575 (7%)
Query: 51 NTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG 110
NT T K + + LC G L +AL L M E I +L++ C +
Sbjct: 20 NTLKTKEGTGKGNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKS 79
Query: 111 YDEGLYLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
+ LH+ + +T + LGN +S++VK G L A VF +M +++ SW +I
Sbjct: 80 LPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIA 139
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
YA+ EAL + M VG ++P+ +TF +L C DL+ E H +++ G+E
Sbjct: 140 AYARHEHGQEALGFFYEMQDVG-IQPNHFTFASILPAC---TDLEVLGEFHDEIVKGGFE 195
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
++V V N L+ MY K G + AR +FD MP+RD +SWNAMI+GY +NG L LF
Sbjct: 196 SNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLF--- 252
Query: 290 REVLVDPDFMTLSSVISASELVGD--------EKLGRE--------VHGYV----IKMGF 329
+ + D +T +++++ GD EK+ + + GYV +K F
Sbjct: 253 -QEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAF 311
Query: 330 -------SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+V N +I + G EE K+F M +VVSW MI+ Y + +
Sbjct: 312 KLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAEN 371
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A++ + M+ P+ T A VL ACA L L+ G + H++ +R+G S +++ NTL+
Sbjct: 372 ALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVG 431
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MY+KC I+ A +VF ++ ++ S +++I+G +N S E+L F +M LKP+ VT
Sbjct: 432 MYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVT 491
Query: 502 LVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
V +LSAC G + G++ I I A + + ++D+ R G A + N
Sbjct: 492 FVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHY--GCMIDLLGRAGCFDEANDLIN 549
Query: 559 SN--ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ D W LL+ L E+ + +I
Sbjct: 550 KMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLI 584
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLP 537
R EAL + M+ N + P+S T S+L C +L K +HAH ++ D L
Sbjct: 44 RLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLG 103
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N L+ +YV+ G + A F+ ++V +W ++ YA G A FF +M D
Sbjct: 104 NKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQD 159
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 253/478 (52%), Gaps = 14/478 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + ++ + M+ + G + A +F +M +RD+ +W +I G G E LS RM
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 189 WV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
GG +P+ T L CG + +L G +H ++ G VV++L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
AR++F +P++D +SW ++I Y G K + LF+ M E + PD + +S ++
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 306 SASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ L D K+ G+ H +++ F D V + N LI MY + VF + +D
Sbjct: 324 AG--LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIK 420
SW++M+ Y + L K +E Y+ M+ D ++ S++S+C+ LG L LG
Sbjct: 382 TDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQS 441
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
H +++ +AN LI MY +C D A ++F + K+V++W+++I
Sbjct: 442 AHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGH 501
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S +AL+ + +M+ +KPNS TLVS++S+CA + AL G+ IH+H +G+ D + A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561
Query: 540 LLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
L+DMY++CG++ A F+S ERDV WN++++GY G+ A + F M +GN
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMM--ERGN 617
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 230/462 (49%), Gaps = 15/462 (3%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D F WN L+ +A F LS ++RM G +P +T P V + L G V
Sbjct: 71 DAFLWNSLLRSRHRASDFASTLSAHRRM-RASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 220 HVHVIRFGY---EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
H + +RFG + V V ++L+ MY +CG + A +FD MP+RD ++W A+ISG N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 277 GEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G+ +GL + M D P+ T+ S + A ++G+ +G +HG+ +K G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
SV + L MY + E+ +F + KD+VSWT++I Y + +KAVE + ME
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PDE+ I+ +L+ + G H +R ++I N LI MY+KCK +D
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSA 508
A VF + ++ SW+S+++ + L +R+M K ++ +L+SI+S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
C+R+G L G+ H ++++ + + NAL+ MY RCG A F +DV W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ L++ Y+ G A + +M+ K N L+ + C
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 230/444 (51%), Gaps = 7/444 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ SM+ K A +F ++ ++DL SW LIG Y +AG ++A+ L+ M G+
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM-EESGL 312
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD C+L G ++ GK H ++R + V + NALI+MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASEL 310
VF + +RD SW++M+ Y + G +K L L+ M+ D D +L S+IS+
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G +LG+ H Y IK ++ SV N LI MY GN + K+F +++KDVV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y A+ Y M EG P+ T+ SV+S+CA L L+ G +H GL
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I L+DMY KC + A ++F + +++V++W +I G ++ + +AL F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M N+KPNS+T ++ILSAC G + G+E+ + + ++D+ + G
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGH 672
Query: 550 MKPAWNQFNSN--ERDVSAWNILL 571
++ A + ++ E D W LL
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLL 696
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 21/438 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + C G E+A++ M+E + DE + L+ G H+ + +
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
SV +GNA +SM+ K + A VF + RD SW+ ++ Y KAG + L L
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 184 YQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y+ M + + D + ++ +C + L+ G+ H + I+ + V NALI+M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG+ AR +F + +D ++W+A+IS Y G L+L+ M V P+ TL
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SVIS+ + + G +H +V +G D+S+C L+ MY+ G K+F M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG--- 418
+DVV+W MIS Y +A++ + MME P+ +T ++LSAC G +D G
Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644
Query: 419 -IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII---- 472
++ + ++ L Y ++D+ K + +A +V +P + + W +++
Sbjct: 645 FTRMEEYSLEPNLKHYA----CMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACK 700
Query: 473 ------LGLRLNNRSFEA 484
+GLR+ ++F +
Sbjct: 701 MHDNFEMGLRVAKKAFAS 718
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL D M + + LV+++ C + G +HS V + +
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M++K G LG A +F M +RD+ +WNV+I GY G +AL L+ M G V
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFS-MMERGNV 618
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ TF +L C + +G+E+ + + E ++ ++ + K G L A
Sbjct: 619 KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAED 678
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
V MP + D W ++ + + GL + + DP+
Sbjct: 679 VVSAMPIEPDGGIWGTLLGACKMHDNFEMGLR--VAKKAFASDPE 721
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH LA+ +GL A L+ YS A F P + W S++ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDG--FL 536
L R+M + +P+ T + SA A +GAL G +HA+++R G + DG +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++L+ MY RCG ++ A F+ ERDV AW +++G GQ + +M+ S G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 596 N 596
+
Sbjct: 208 D 208
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 239/468 (51%), Gaps = 23/468 (4%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ G A F + R+L+SW L+ +A +G E L +RM GV+PD
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQ-DGVRPDAV 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF L +CG L+ G +H V+ E D V NAL+ MY KCG L A+ VF M
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 259 PK-RDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
+ R+ ISW+ M + +G E ++ +++ +T+ S S+ LV D
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQD- 178
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMIS 372
GR +H + GF ++ V N ++ MY G EE KVF M+ +DVVSW M+S
Sbjct: 179 --GRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + A++ YQ M+ PD++T S+LSAC+ ++ LG LH+ + L
Sbjct: 237 TYVHNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I+ N L+ MY+KC +A VF ++ +++ISWT+II EA F++M+
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQML 353
Query: 493 --------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+KP+++ V+IL+ACA + AL GK + A G++ D + A++++Y
Sbjct: 354 ELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLY 413
Query: 545 VRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG ++ A F++ + DV WN ++ YA+ GQ A + F +M
Sbjct: 414 GKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM 461
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 264/539 (48%), Gaps = 26/539 (4%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
++G ++ L+ L+ M++ + D + + C +G+ +H +V + + +
Sbjct: 35 ISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPK 94
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ NA L+M+ K G L HA VF KM R++ SW+++ G +A G EAL ++ M +
Sbjct: 95 VSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL 154
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G+K +L C ++ G+ +H + G+E+++ V NA++TMY +CG +
Sbjct: 155 -GIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEE 213
Query: 251 ARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD M + RD +SWN M+S Y N + L+ M+ + PD +T S++SA
Sbjct: 214 ARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSAC 270
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
D LGR +H ++ +V V N L+ MY G+ E VF +ME + ++SWT
Sbjct: 271 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWT 330
Query: 369 TMISCYEGSVLPDKAVETYQMM---EAEGS----MPDEITIASVLSACACLGNLDLGIKL 421
T+IS Y L +A +Q M E GS PD + ++L+ACA + L+ G +
Sbjct: 331 TIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMV 390
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
+ A GL S + ++++Y KC I++A +F + + +V W ++I +
Sbjct: 391 SEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQ 450
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGK----EIHAHALRIGVAFDGF 535
S EAL +F+R M ++P+S + VSIL AC+ G GK + + F
Sbjct: 451 SHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHF 510
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ D+ R GR+K A +F + D AW LL A+E K++
Sbjct: 511 --GCVADLLGRGGRLKEA-EEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLL 566
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 20/444 (4%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
L+G++ +AL++ M L I + A+V ++ C +G +HS ++ + +
Sbjct: 137 LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELL 196
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ NA ++M+ + G + A VF M + RD+ SWN+++ Y +A+ LYQRM
Sbjct: 197 VANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM-- 254
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++PD T+ +L C D+ G+ +H ++ E +V V NAL++MY KCG
Sbjct: 255 --QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHT 312
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-------LVDPDFMTLS 302
AR VFD M +R ISW +IS Y + LF M E+ V PD +
Sbjct: 313 EARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFV 372
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++++A V + G+ V G S D +V ++ +Y G EE ++F + S+
Sbjct: 373 TILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSR 432
Query: 363 -DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
DV W MI+ Y +A++ + ME EG PD + S+L AC+ G D G K
Sbjct: 433 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG-KS 491
Query: 422 HQLAMRT---GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ +M T + I + D+ + + +A E ++P K + ++WTS++ R
Sbjct: 492 YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACR- 550
Query: 478 NNRSFEALIFFRKMMLNLKPNSVT 501
N+R + +L L+P T
Sbjct: 551 NHRDLKRAKEVANKLLRLEPRCAT 574
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 253/478 (52%), Gaps = 14/478 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + ++ + M+ + G + A +F +M +RD+ +W +I G G E LS RM
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 189 WV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
GG +P+ T L CG + +L G +H ++ G VV++L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
AR++F +P++D +SW ++I Y G K + LF+ M E + PD + +S ++
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 306 SASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ L D K+ G+ H +++ F D V + N LI MY + VF + +D
Sbjct: 324 AG--LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIK 420
SW++M+ Y + L K +E Y+ M+ D ++ S++S+C+ LG L LG
Sbjct: 382 TDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQS 441
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
H +++ +AN LI MY +C D A ++F + K+V++W+++I
Sbjct: 442 AHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGH 501
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S +AL+ + +M+ +KPNS TLVS++S+CA + AL G+ IH+H +G+ D + A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561
Query: 540 LLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
L+DMY++CG++ A F+S ERDV WN++++GY G+ A + F M +GN
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMM--ERGN 617
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 230/462 (49%), Gaps = 15/462 (3%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D F WN L+ +A F LS ++RM G +P +T P V + L G V
Sbjct: 71 DAFLWNSLLRSRHRASDFASTLSAHRRMR-ASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 220 HVHVIRFGY---EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
H + +RFG + V V ++L+ MY +CG + A +FD MP+RD ++W A+ISG N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 277 GEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G+ +GL + M D P+ T+ S + A ++G+ +G +HG+ +K G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
SV + L MY + E+ +F + KD+VSWT++I Y + +KAVE + ME
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PDE+ I+ +L+ + G H +R ++I N LI MY+KCK +D
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSA 508
A VF + ++ SW+S+++ + L +R+M K ++ +L+SI+S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
C+R+G L G+ H ++++ + + NAL+ MY RCG A F +DV W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ L++ Y+ G A + +M+ K N L+ + C
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 230/444 (51%), Gaps = 7/444 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ SM+ K A +F ++ ++DL SW LIG Y +AG ++A+ L+ M G+
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME-ESGL 312
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD C+L G ++ GK H ++R + V + NALI+MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASEL 310
VF + +RD SW++M+ Y + G +K L L+ M+ D D +L S+IS+
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G +LG+ H Y IK ++ SV N LI MY GN + K+F +++KDVV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y A+ Y M EG P+ T+ SV+S+CA L L+ G +H GL
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I L+DMY KC + A ++F + +++V++W +I G ++ + +AL F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M N+KPNS+T ++ILSAC G + G+E+ + + ++D+ + G
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGH 672
Query: 550 MKPAWNQFNSN--ERDVSAWNILL 571
++ A + ++ E D W LL
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLL 696
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 13/434 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + C G E+A++ M+E + DE + L+ G H+ + +
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
SV +GNA +SM+ K + A VF + RD SW+ ++ Y KAG + L L
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 184 YQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y+ M + + D + ++ +C + L+ G+ H + I+ + V NALI+M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG+ AR +F + +D ++W+A+IS Y G L+L+ M V P+ TL
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SVIS+ + + G +H +V +G D+S+C L+ MY+ G K+F M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV+W MIS Y +A++ + MME P+ +T ++LSAC G +D G +L
Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-------- 472
L + ++D+ K + +A +V +P + + W +++
Sbjct: 645 FTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDN 704
Query: 473 --LGLRLNNRSFEA 484
+GLR+ ++F +
Sbjct: 705 FEMGLRVAKKAFAS 718
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH LA+ +GL A L+ YS A F P + W S++ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDG--FL 536
L R+M + +P+ T + SA A +GAL G +HA+++R G + DG +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++L+ MY RCG ++ A F+ ERDV AW +++G GQ + +M+ S G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 596 N 596
+
Sbjct: 208 D 208
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 244/487 (50%), Gaps = 61/487 (12%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+F WN LI G + +LY++M +G PD YTFP V + C + L G +H
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT-PDHYTFPFVFKACANLSSLSLGASLH 282
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR---DRISWNAMISGYFENG 277
V R G+ ++V V NA+++MY KCG L A +FD + R D +SWN+++S Y
Sbjct: 283 ATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWAS 342
Query: 278 EYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L LF M L+ PD ++L +++ A + GR+VHG+ I+ G DDV V
Sbjct: 343 DANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVG 402
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE--- 393
N ++ MY G EE KVF RM+ KDVVSW M++ Y + + A+ ++ M E
Sbjct: 403 NAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIE 462
Query: 394 --------------------------------GSMPDEITIASVLSACACLGNLDLGIKL 421
GS P+ +T+ S+LSAC +G L G +
Sbjct: 463 LDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKET 522
Query: 422 HQLAMRTGL--------ISYIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSI 471
H A++ L + + N LIDMY+KC+ + A ++F + D++V++WT +
Sbjct: 523 HCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVM 582
Query: 472 ILGLRLNNRSFEALIFFR---KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
I G + + AL F KM ++KPN TL L ACAR+ AL G+++HA+ LR
Sbjct: 583 IGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR- 641
Query: 529 GVAFDG----FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALA 583
F G F+ N L+DMY + G + A F N +R+ +W L+TGY G+G A
Sbjct: 642 --NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDA 699
Query: 584 EEFFRKM 590
F +M
Sbjct: 700 LRVFDEM 706
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 250/538 (46%), Gaps = 53/538 (9%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
GS M+ L D + + C G LH+ VS++ +V +
Sbjct: 238 GSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVC 297
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR---DLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
NA +SM+ K G L HA +F +C R DL SWN ++ Y A + AL+L+ +M
Sbjct: 298 NAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTR 357
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ PDV + +L C + RG++VH IR G DV V NA++ MY KCG +
Sbjct: 358 HLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEE 417
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD--------------- 295
A VF M +D +SWNAM++GY + G L LF M E ++
Sbjct: 418 ANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQ 477
Query: 296 --------------------PDFMTLSSVISASELVGDEKLGREVHGYVIKMGF------ 329
P+ +TL S++SA VG G+E H Y IK
Sbjct: 478 RGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPD 537
Query: 330 --SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVE 385
+DD+ V N LI MY + E K+F + KD VV+WT MI Y + A++
Sbjct: 538 PGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQ 597
Query: 386 TYQ-MMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII-IANTLID 442
+ M + + S+ P++ T++ L ACA L L G ++H +R S ++ +AN LID
Sbjct: 598 LFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLID 657
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
MYSK +D A VF +P +N +SWTS++ G ++ R +AL F +M + L P+ +T
Sbjct: 658 MYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGIT 717
Query: 502 LVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+ +L AC+ G + G + GV ++D++ R GR+ A N
Sbjct: 718 FLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLIN 775
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 188/406 (46%), Gaps = 53/406 (13%)
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
LI Y+ A L+ + +P WN +I G L+ M+ +
Sbjct: 197 LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT 256
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T V A + LG +H V + GF+ +V VCN ++ MY G +
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNM 316
Query: 356 FSRMESK---DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACAC 411
F + + D+VSW +++S Y + + A+ + M M PD I++ ++L ACA
Sbjct: 317 FDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACAS 376
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS---- 467
L G ++H ++R+GL+ + + N ++DMY+KC +++A +VF ++ K+V+S
Sbjct: 377 LAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAM 436
Query: 468 -------------------------------WTSIILGLRLNNRSFEALIFFRKMM-LNL 495
WT++I G + EAL FR+M
Sbjct: 437 VTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGS 496
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--------NALLDMYVRC 547
+PN VTLVS+LSAC +GAL+ GKE H +A++ + DG P N L+DMY +C
Sbjct: 497 RPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKC 556
Query: 548 GRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+S +RDV W +++ GYA+ G A + F M
Sbjct: 557 QSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 43/271 (15%)
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
P Y+ M++ G PD T V ACA L +L LG LH R+G S + + N
Sbjct: 240 PRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNA 299
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNV---ISWTSIILGLRLNNRSFEALIFFRKMMLN-- 494
++ MY KC + A +F + + + +SW S++ + + AL F KM
Sbjct: 300 VVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL 359
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA- 553
+ P+ ++LV+IL ACA + A + G+++H ++R G+ D F+ NA++DMY +CG+M+ A
Sbjct: 360 MSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEAN 419
Query: 554 -------------WNQFNSN----------------------ERDVSAWNILLTGYAERG 578
WN + E DV W ++TGYA+RG
Sbjct: 420 KVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRG 479
Query: 579 QGALAEEFFRKMID--SKGNWRKLMGLFRKC 607
QG A + FR+M D S+ N L+ L C
Sbjct: 480 QGCEALDVFRQMCDCGSRPNVVTLVSLLSAC 510
>gi|359488543|ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244618 [Vitis vinifera]
Length = 1154
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 217/395 (54%), Gaps = 6/395 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K SHL L + ++ + G + HA+ +F ++F WN +I ++
Sbjct: 486 LHASILK--SHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPH 543
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L LY RM +G ++ +TFP +L+ CG + D + G H HV+ FGYE+DV V N
Sbjct: 544 SRNSLRLYSRMLQLG-IQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVAN 602
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY + G +R VF+ MP+R+ +SW++M+ Y NG Y +GL+LF M + P
Sbjct: 603 SLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAP 662
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ S+++A + E + VI G D SV N + MY G + + F
Sbjct: 663 N---RGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFF 719
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ KD+V+WT+MI Y + LP A+E ++ M+ G +PD +T+ S++ A + L +
Sbjct: 720 YGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQ 779
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
L +H + R+ ++I + +ID+Y KC ++ A + F ++ +N+ISW+++I G
Sbjct: 780 LARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYG 839
Query: 477 LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
++ EAL F +M ++KP+ + V +LSAC+
Sbjct: 840 MHGHGREALCLFDQMKASIKPDHIAFVMVLSACSH 874
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 7/380 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ K +H +++ + +LI Y G + A +F + WN +I
Sbjct: 480 LEALKSLHASILK--SHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRA 537
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ L L+ M ++ + T ++ A + D +LG H +V+ G+ D
Sbjct: 538 FSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESD 597
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V N L+ MY FG + +VF RM ++VVSW++M+ Y + ++ + + M
Sbjct: 598 VFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLN 657
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG P+ S+++A AC+ ++ + GL S + N + MY++C ID
Sbjct: 658 EGIAPNR---GSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDV 714
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACAR 511
A F+ I DK++++WTS+I + AL F++M +L + P+SVTL+S++ A +
Sbjct: 715 ARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSN 774
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ + + +H R L A++D+YV+CG ++ A F+ + R++ +W+ +
Sbjct: 775 LASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTM 834
Query: 571 LTGYAERGQGALAEEFFRKM 590
++GY G G A F +M
Sbjct: 835 ISGYGMHGHGREALCLFDQM 854
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 166/336 (49%), Gaps = 13/336 (3%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ M +L I L++ C ++ G H+ V V + N+ ++
Sbjct: 547 SLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMA 606
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD-- 196
M+ +FG + VF +M +R++ SW+ ++G YA G ++E L L+ RM G+ P+
Sbjct: 607 MYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRML-NEGIAPNRG 665
Query: 197 --VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
V C+ R + VI G ++D V NA + MY +CG + AR
Sbjct: 666 SIVNAMACIHRE-------HEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRF 718
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F G+ +D ++W +MI Y + + L LF M+ + + PD +TL S+I A +
Sbjct: 719 FYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASF 778
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+L R VHG + + F + +++ +I +Y+ GN E K F RM +++++SW+TMIS Y
Sbjct: 779 QLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGY 838
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+A+ + M+A PD I VLSAC+
Sbjct: 839 GMHGHGREALCLFDQMKAS-IKPDHIAFVMVLSACS 873
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 118/291 (40%), Gaps = 32/291 (10%)
Query: 325 IKMGFSDD-----VSVCNPLIKMYLSF--GNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ +GF +D + P++ ++ G+ +G ++FS WT + +G+
Sbjct: 376 LSLGFGEDSINASAGLVMPMVSSKITGFRGSSPDGGRLFSLKNP----GWTKISMDEDGA 431
Query: 378 VLPDKAVET--------------YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+ D +++ M + E M + +++ C L L LH
Sbjct: 432 KMLDTSIDPPPQGASASICFGPQEHMNQGEVHMGMKANCIALIKQCVTLEALK---SLHA 488
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++ L ++ +LI Y+ I A +F NV W II S
Sbjct: 489 SILKSHLHPHL--CTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPHSRN 546
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+L + +M+ L ++ + T +L AC + G HAH + G D F+ N+L+
Sbjct: 547 SLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMA 606
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
MY R G + F ER+V +W+ ++ YA G+ F +M++
Sbjct: 607 MYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLN 657
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 252/464 (54%), Gaps = 10/464 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++MF + GD+ A VF +++ WN +I GY + G F EA+ L+ ++ GV D
Sbjct: 251 IAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLD 310
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLV 254
V TF + D K G+++H ++++ G + + V+ NAL+ MY +CG++ A +
Sbjct: 311 VVTFLSAITAASQSQDGKLGQQLHGYLMK-GMRSTLPVILGNALVVMYSRCGNVHAAFDL 369
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD +P++D +SWN M++ + +N +GL+L M + D +TL++V+SA+ GD
Sbjct: 370 FDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDL 429
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISC 373
++G++ HGY+I+ G + + + LI MY G+ + ++VF +D V+W MI+
Sbjct: 430 QIGKQSHGYLIRHGIEGE-GLESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAG 488
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG-NLDLGIKLHQLAMRTGLIS 432
Y S P++AV ++ M G P +T+ASVL AC +G + G ++H A+R L +
Sbjct: 489 YTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLDT 548
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I + L+DMYSKC I A VF ++ +K+ +++T++I GL + AL F M
Sbjct: 549 NIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQ 608
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
N LKP++VT ++ +SAC G + G ++ G++ ++D+ + GR++
Sbjct: 609 DNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSATPQHHCCIVDLLAKAGRVE 668
Query: 552 PAWNQFNSNERD---VSAWNILLTGYAERGQGALAEEFFRKMID 592
A++ S D ++ W LL +G+ L K+++
Sbjct: 669 EAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTAFVTDKLLN 712
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 243/454 (53%), Gaps = 19/454 (4%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD----VYTFPCVLRTC 207
+F R++ SWN L+G Y K G EAL ++ RM G++P V FP
Sbjct: 164 LFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRML-EDGIRPTPVSFVNVFPAAASDD 222
Query: 208 GGVPDLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
P G +I+ G Y +D+ VV++ I M+ + GD+ AR+VFD K++
Sbjct: 223 PSWPFFLYGM-----LIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEV 277
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WN MI+GY +NG++ + + LFI +M V D +T S I+A+ D KLG+++HGY+
Sbjct: 278 WNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYL 337
Query: 325 IK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
+K M + V + N L+ MY GN +F ++ KD+VSW TM++ + + +
Sbjct: 338 MKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEG 397
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M G + D +T+ +VLSA + G+L +G + H +R G I + + LI+M
Sbjct: 398 LLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHG-IEGEGLESYLINM 456
Query: 444 YSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
YSK ID A VF D++ ++W ++I G + + +A++ FR M+ ++P SVT
Sbjct: 457 YSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVT 516
Query: 502 LVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
L S+L AC +G + GK+IH+ ALR + + F+ AL+DMY +CG + A N F+
Sbjct: 517 LASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRM 576
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
E+ + +++G + G G A F M D+
Sbjct: 577 TEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDN 610
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 229/446 (51%), Gaps = 20/446 (4%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVH 222
NVL+ Y D AL LY + P D YT+ C L C L+ G+ VH H
Sbjct: 66 NVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYTYSCALTACARSRRLRLGRSVHAH 125
Query: 223 VIRFGYE-ADVDVV-NALITMYVKC-----GDLVRARLVFDGMPKRDRISWNAMISGYFE 275
++R D V+ N+L+ +Y C G + R +FD PKR+ +SWN ++ Y +
Sbjct: 126 LLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVK 185
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSDDV 333
G + L +F+ M E + P ++ +V A+ D ++G +IK G + D+
Sbjct: 186 TGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAA-SDDPSWPFFLYGMLIKHGVEYVSDL 244
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEA 392
V + I M+ G+ + VF K++ W TMI+ Y + +A++ + Q+M +
Sbjct: 245 FVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGS 304
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY--IIIANTLIDMYSKCKCI 450
+G D +T S ++A + + LG +LH M+ G+ S +I+ N L+ MYS+C +
Sbjct: 305 KGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMK-GMRSTLPVILGNALVVMYSRCGNV 363
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A ++F Q+P+K+++SW +++ N+ FE L+ +M + ++VTL ++LSA
Sbjct: 364 HAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAA 423
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAW 567
+ G L GK+ H + +R G+ +G L + L++MY + G + A F+ N+RD W
Sbjct: 424 SNTGDLQIGKQSHGYLIRHGIEGEG-LESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTW 482
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS 593
N ++ GY + GQ A FR M+++
Sbjct: 483 NAMIAGYTQSGQPEQAVLAFRAMVEA 508
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 221/439 (50%), Gaps = 9/439 (2%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + NG +A+ ++ M + +D ++ + + G LH +
Sbjct: 279 NTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLM 338
Query: 123 KTM-SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K M S L V LGNA + M+ + G++ A+ +F ++ ++D+ SWN ++ + + F E L
Sbjct: 339 KGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGL 398
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L +M G V D T VL DL+ GK+ H ++IR G E + + + LI M
Sbjct: 399 LLVYQMHKSGFVA-DAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLINM 456
Query: 242 YVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y K G + A+ VFDG RD ++WNAMI+GY ++G+ + ++ F M E V+P +T
Sbjct: 457 YSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVT 516
Query: 301 LSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
L+SV+ A E VG+ + G+++H + ++ ++ V L+ MY G E VF RM
Sbjct: 517 LASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRM 576
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K V++TTMIS D+A+ + M+ G PD +T + +SAC G +D G+
Sbjct: 577 TEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGL 636
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVIS-WTSIILGLRL 477
L++ GL + ++D+ +K +++A + + D N I+ W S++ +
Sbjct: 637 SLYRSMETFGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKA 696
Query: 478 NNRSFEALIFFRKMMLNLK 496
+ E F +LN++
Sbjct: 697 QGKQ-ELTAFVTDKLLNIE 714
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 15/240 (6%)
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIKLHQLAM 426
++ Y LPD A+ Y ++ P D T + L+ACA L LG +H +
Sbjct: 68 LLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYTYSCALTACARSRRLRLGRSVHAHLL 127
Query: 427 RTG--LISYIIIANTLIDMYSKCK-----CIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
R L ++ N+L+++Y+ C +D +F P +NV+SW +++
Sbjct: 128 RRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTG 187
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--DGFL 536
R +EAL F +M+ + ++P V+ V++ A A ++ ++ GV + D F+
Sbjct: 188 RPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASDDP-SWPFFLYGMLIKHGVEYVSDLFV 246
Query: 537 PNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++ + M+ G ++ A F+ + ++++ WN ++TGY + GQ + A + F +++ SKG
Sbjct: 247 VSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKG 306
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 259/507 (51%), Gaps = 46/507 (9%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
L +++ C +G H V K + + NA L M+ K G +G A +F M
Sbjct: 144 LASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMA 203
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV------- 210
+ S+ ++GG A+ G D+AL L+ RM GV D + VL C
Sbjct: 204 RPNEVSFTAMMGGLAQTGSIDDALRLFARMCR-SGVPVDPVSVSSVLGACAQACATDYSV 262
Query: 211 -PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ G+ +H V+R G+ +D V N+LI MY KC ++ A VF+ +P +SWN +
Sbjct: 263 ARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNIL 322
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+G+ + G K + + +M+E +P+ +T S+++++ R+VH
Sbjct: 323 ITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC------IKARDVH-------- 368
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
+F ++ V +W T++S Y +E ++
Sbjct: 369 ---------------------SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRR 407
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M+ + PD T+A +LS+C+ LG LD G ++H ++R L + + +A+ L+DMYSKC
Sbjct: 408 MQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQ 467
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
I A +F+++ +++V+ W SII GL +++ + EA FF++M N + P + S++++
Sbjct: 468 IGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINS 527
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C+R+ ++ G++IHA ++ G + ++ +AL+DMY +CG M A F++ +++ AW
Sbjct: 528 CSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 587
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSK 594
N ++ GYA+ G G A E F M+ ++
Sbjct: 588 NEMIHGYAQNGLGDKAVELFEYMLTTE 614
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 234/470 (49%), Gaps = 51/470 (10%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALSLYQRMFWVGG 192
NA LS + GDL A + G M R+ SWN +I A++ G EA+ +Y RM G
Sbjct: 78 NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRM-RAEG 136
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P +T VL CGG+ L G+ H ++ G +A+ V NAL+ MY KCG + A
Sbjct: 137 LLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAV 196
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS---- 308
+F GM + + +S+ AM+ G + G L LF M V D +++SSV+ A
Sbjct: 197 RLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQAC 256
Query: 309 ----ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ +LG+ +H V++ GF D V N LI MY +E KVF + S +
Sbjct: 257 ATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTI 316
Query: 365 VSWTTMISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
VSW +I+ + EGS KAVE +M+ G P+E+T +++L++C
Sbjct: 317 VSWNILITGFGQEGSCA--KAVEVLSLMQEAGFEPNEVTYSNLLASCI------------ 362
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
K + + A +F +I +V +W +++ G +
Sbjct: 363 -----------------------KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQ 399
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
+ + FR+M N++P+ TL ILS+C+++G L G+++H+ ++R + D F+ + L+
Sbjct: 400 DTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLV 459
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
DMY +CG++ A + FN ERDV WN +++G A +FF++M
Sbjct: 460 DMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQM 509
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 213/453 (47%), Gaps = 45/453 (9%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK--------RGYDEGLYLHSVV 121
L GS++ AL+ M + VD ++ +++ C R + G +H++V
Sbjct: 217 LAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALV 276
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ +GN+ + M+ K ++ A VF + + SWN+LI G+ + G +A+
Sbjct: 277 VRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV 336
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ M G +P+ T+ +L +C
Sbjct: 337 EVLSLM-QEAGFEPNEVTYSNLLASC---------------------------------- 361
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+K D+ AR +FD + + +WN ++SGY + ++ + LF M+ V PD TL
Sbjct: 362 -IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTL 420
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ ++S+ +G GR+VH ++ +D+ V + L+ MY G +F++M
Sbjct: 421 AVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTE 480
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV W ++IS L +A + ++ M G MP E + AS++++C+ L ++ G ++
Sbjct: 481 RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQI 540
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H M+ G + + + LIDMY+KC +D A F + KN+++W +I G N
Sbjct: 541 HAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLG 600
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+A+ F M+ KP++VT +++L+ C+ G
Sbjct: 601 DKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 633
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 2/330 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ +K D+ A +F K+ + +WN L+ GY + + + L++RM V+P
Sbjct: 357 LLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRM-QHQNVQP 415
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T +L +C + L G++VH +RF D+ V + L+ MY KCG + AR +F
Sbjct: 416 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 475
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ M +RD + WN++ISG + + F MRE + P + +S+I++ +
Sbjct: 476 NKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIP 535
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR++H V+K G+ +V V + LI MY GN ++ F M K++V+W MI Y
Sbjct: 536 HGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYA 595
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+ L DKAVE ++ M PD +T +VL+ C+ G +D + + + G+I
Sbjct: 596 QNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLA 655
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
LID + + + H++P K+
Sbjct: 656 EHYTCLIDALGRAGRFVEVEALIHKMPCKD 685
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 8/288 (2%)
Query: 32 FKPKTRHFSSKNAQSVQVLNTQNTSSIATK--NP-----NSRLNELCLNGSLEQALKYLD 84
F+P +S+ A ++ + + ++ K P N+ L+ C + ++
Sbjct: 347 FEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFR 406
Query: 85 SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFG 144
MQ N+ D L ++ C D G +HS + + H + + + + M+ K G
Sbjct: 407 RMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCG 466
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
+G A +F KM +RD+ WN +I G EA +++M G+ P ++ ++
Sbjct: 467 QIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQM-RENGIMPTESSYASMI 525
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+C + + G+++H V++ GY+ +V V +ALI MY KCG++ ARL FD M ++ +
Sbjct: 526 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 585
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+WN MI GY +NG K + LF M PD +T +V++ G
Sbjct: 586 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 633
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L ++ ++A + M+E I E + +++ C G +H+ V K
Sbjct: 487 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 546
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V +G+A + M+ K G++ A F M +++ +WN +I GYA+ G D+A+ L
Sbjct: 547 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVEL 606
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ M KPD TF VL C G+ D K + +G + LI
Sbjct: 607 FEYMLTT-EQKPDAVTFIAVLTGCSHSGLVD-KAMAFFNSMENSYGIIPLAEHYTCLIDA 664
Query: 242 YVKCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ G V + MP K D I W +++
Sbjct: 665 LGRAGRFVEVEALIHKMPCKDDPIIWEVLLAA 696
>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
Length = 846
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 272/556 (48%), Gaps = 23/556 (4%)
Query: 29 SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQE 88
+FY K H S S++V N S+I NG E A++ M
Sbjct: 250 NFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQ--------NGHHEPAVELFREMLL 301
Query: 89 LNICVDE--DALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGD 145
I ++ AL+ +V C+ D+ LH+ + V + A ++M+ + G
Sbjct: 302 DGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGS 361
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVL 204
+ A VF +M R++ SWN ++ Y+ EAL ++ M G GVKPD TF
Sbjct: 362 VSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAA 421
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLVFDGMPKRD 262
CG + DL R E+H + + DVV +ALI MY C L A V D MP+ +
Sbjct: 422 DACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTN 481
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
ISW +MI +N + + ++ M+ PD +T+ +VI A+ + D K G E H
Sbjct: 482 VISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHA 541
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM---ESKDVVSWTTMISCYEGSVL 379
GF+ V N L+ +Y + G+ + E VF + +DVV+W +M+S + + L
Sbjct: 542 QAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGL 601
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACAC-LGNLDLGIKLHQLAMRTGLISYIIIAN 438
P++A+ T+Q M G PD+ T ++L+ACA L +K+H LA GL S +AN
Sbjct: 602 PNQALRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVAN 661
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKP 497
TL+ MYS+C + +A +VFH I KNV+SW+++ N + AL FR M+ ++P
Sbjct: 662 TLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQP 721
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWN 555
N+VT +SILS C+ G LM + +A+ + + LLD+ R G+ A
Sbjct: 722 NAVTFISILSGCSHTG-LMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRA-E 779
Query: 556 QFNSNERDVSAWNILL 571
+ ++ + AWN LL
Sbjct: 780 ELATHLPNPVAWNSLL 795
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 259/534 (48%), Gaps = 20/534 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +AL M + D A V + C ++G LHS + + +G
Sbjct: 186 GHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVG 245
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA L+ + K G + + +F M +++ +W+ ++ YA+ G + A+ L++ M + G+
Sbjct: 246 NALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREML-LDGI 304
Query: 194 KPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRF----GYEADVDVVNALITMYVKCGD 247
P+ T ++ C L + +E+H RF DV V AL+ MY +CG
Sbjct: 305 APNKVTIALLRIVEACDQPDALDQARELHT---RFFPGAAAAGDVVVATALVNMYGRCGS 361
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVI 305
+ A+ VFD M R+ SWNAM+ Y N ++ L F +++ V PD +T S
Sbjct: 362 VSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAA 421
Query: 306 SASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
A ++GD E+H + + S+ DV + + LIKMY + + +V M +
Sbjct: 422 DACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTN 481
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+SWT+MI E + + A+ Y+ M+ G PD +T+ +V+ A A L +L GI+ H
Sbjct: 482 VISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHA 541
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK---NVISWTSIILGLRLNNR 480
A G + ++ N L+ +Y + A VF ++ + +V++W S++ N
Sbjct: 542 QAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGL 601
Query: 481 SFEALIFFRKMMLNLK-PNSVTLVSILSACA-RIGALMCGKEIHAHALRIGVAFDGFLPN 538
+AL F++M+ + + P+ T V+IL+ACA L+ +IHA A G+ D + N
Sbjct: 602 PNQALRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVAN 661
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
LL MY RCG + A F++ +++V +W+ + A G A + FR M+
Sbjct: 662 TLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGML 715
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 242/504 (48%), Gaps = 26/504 (5%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ D G +H + + H L N + M+ + + A VF + +++F+W +LI
Sbjct: 9 KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILI 68
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRF 226
+ G F EA+ L++ M V GV+ D +TF +L C G+ L GK +H + +
Sbjct: 69 VAHTHNGLFFEAVELFREMD-VHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQ 127
Query: 227 GYE----ADVDVVNALITMYVKCGDLVRARLVFDGMPKR----DRISWNAMISGYFENGE 278
G + V A+I Y + G + +A +F+ M + D I+W AM++ Y + G
Sbjct: 128 GLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGH 187
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L+LF M ++PD + I A + + G +H ++ D V N
Sbjct: 188 AREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ Y G E +FS M+ K+VV+W+ +++ Y + + AVE ++ M +G P+
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPN 307
Query: 399 EITIA--SVLSACACLGNLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
++TIA ++ AC LD +LH + +++A L++MY +C + A
Sbjct: 308 KVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKT 367
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACARI 512
VF ++ +N+ SW ++++ LN RS EAL FFR M+L +KP+++T VS AC +
Sbjct: 368 VFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMM 427
Query: 513 GALMCGKEIHAHALRIGVAF-----DGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSA 566
G L EIH+ RI ++ D L +AL+ MY C + A + R +V +
Sbjct: 428 GDLSRAVEIHS---RISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVIS 484
Query: 567 WNILLTGYAERGQGALAEEFFRKM 590
W ++ + A +R M
Sbjct: 485 WTSMILACEQNEDNEAAIHVYRAM 508
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 203/414 (49%), Gaps = 35/414 (8%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ G +L G+ VH+ +I GY D + N LI MY +C + A VF + +++
Sbjct: 1 MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KLGREV 320
+W +I + NG + + + LF M V D T S+++ A +G LG+ +
Sbjct: 61 VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120
Query: 321 HGYVIKMGF---SDDVSVCN-PLIKMYLSFGNREEGEKVFSRME----SKDVVSWTTMIS 372
H + + G S+ +C+ +I Y G+ E+ ++F RM+ D+++WT M++
Sbjct: 121 HSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMT 180
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ ++ M+ +G PD + + AC+ + +L+ G LH + + +
Sbjct: 181 AYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVEC 240
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ N L++ Y+K + ++ +F + KNV++W++I+ N A+ FR+M+
Sbjct: 241 DGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREML 300
Query: 493 LN-LKPNSVT--LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----------N 538
L+ + PN VT L+ I+ AC + AL +E+H F P
Sbjct: 301 LDGIAPNKVTIALLRIVEACDQPDALDQARELHTR----------FFPGAAAAGDVVVAT 350
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
AL++MY RCG + A F+ R++++WN +L Y+ + A FFR M+
Sbjct: 351 ALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTML 404
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 253/478 (52%), Gaps = 14/478 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + ++ + M+ + G + A +F +M +RD+ +W +I G G E LS RM
Sbjct: 144 SVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMV 203
Query: 189 WV---GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
GG +P+ T L CG + +L G +H ++ G VV++L +MY KC
Sbjct: 204 RSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKC 263
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
AR++F +P++D +SW ++I Y G K + LF+ M E + PD + +S ++
Sbjct: 264 DSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323
Query: 306 SASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+ L D K+ G+ H +++ F D V + N LI MY + VF + +D
Sbjct: 324 AG--LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRD 381
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIK 420
SW++M+ Y + L K +E Y+ M+ D ++ S++S+C+ LG L LG
Sbjct: 382 TDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQS 441
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
H +++ +AN LI MY +C D A ++F + K+V++W+++I
Sbjct: 442 AHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGH 501
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
S +AL+ + +M+ +KPNS TLVS++S+CA + AL G+ IH+H +G+ D + A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561
Query: 540 LLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
L+DMY++CG++ A F+S ERDV WN++++GY G+ A + F M +GN
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMM--ERGN 617
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 230/462 (49%), Gaps = 15/462 (3%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D F WN L+ +A F LS ++RM G +P +T P V + L G V
Sbjct: 71 DAFLWNSLLRSRHRASDFASTLSAHRRMR-ASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 220 HVHVIRFGY---EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
H + +RFG + V V ++L+ MY +CG + A +FD MP+RD ++W A+ISG N
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 277 GEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G+ +GL + M D P+ T+ S + A ++G+ +G +HG+ +K G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
SV + L MY + E+ +F + KD+VSWT++I Y + +KAVE + ME
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PDE+ I+ +L+ + G H +R ++I N LI MY+KCK +D
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSA 508
A VF + ++ SW+S+++ + L +R+M K ++ +L+SI+S+
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
C+R+G L G+ H ++++ + + NAL+ MY RCG A F +DV W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 568 NILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ L++ Y+ G A + +M+ K N L+ + C
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSC 531
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 230/444 (51%), Gaps = 7/444 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ SM+ K A +F ++ ++DL SW LIG Y +AG ++A+ L+ M G+
Sbjct: 254 SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME-ESGL 312
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD C+L G ++ GK H ++R + V + NALI+MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASEL 310
VF + +RD SW++M+ Y + G +K L L+ M+ D D +L S+IS+
Sbjct: 373 VFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G +LG+ H Y IK ++ SV N LI MY GN + K+F +++KDVV+W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y A+ Y M EG P+ T+ SV+S+CA L L+ G +H GL
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I L+DMY KC + A ++F + +++V++W +I G ++ + +AL F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M N+KPNS+T ++ILSAC G + G+E+ + + ++D+ + G
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGH 672
Query: 550 MKPAWNQFNSN--ERDVSAWNILL 571
++ A + ++ E D W LL
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLL 696
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 13/434 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S + C G E+A++ M+E + DE + L+ G H+ + +
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
SV +GNA +SM+ K + A VF + RD SW+ ++ Y KAG + L L
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 184 YQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y+ M + + D + ++ +C + L+ G+ H + I+ + V NALI+M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG+ AR +F + +D ++W+A+IS Y G L+L+ M V P+ TL
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SVIS+ + + G +H +V +G D+S+C L+ MY+ G K+F M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV+W MIS Y +A++ + MME P+ +T ++LSAC G +D G +L
Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-------- 472
L + ++D+ K + +A +V +P + + W +++
Sbjct: 645 FTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDN 704
Query: 473 --LGLRLNNRSFEA 484
+GLR+ ++F +
Sbjct: 705 FEMGLRVAKKAFAS 718
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH LA+ +GL A L+ YS A F P + W S++ +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDG--FL 536
L R+M + +P+ T + SA A +GAL G +HA+++R G + DG +
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++L+ MY RCG ++ A F+ ERDV AW +++G GQ + +M+ S G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 596 N 596
+
Sbjct: 208 D 208
>gi|297741134|emb|CBI31865.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 224/433 (51%), Gaps = 21/433 (4%)
Query: 146 LGHAWYVFGKMCDRDL----FSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTF 200
+G Y F + DL +N LI YA + A +Y R+ VG G PD+YTF
Sbjct: 51 IGFVDYAFDFLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRI--VGNGFVPDMYTF 108
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P VL+ C ++ G++VH ++ G+ D+ V N+L+ Y CG A VFD M
Sbjct: 109 PVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLV 168
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
RD +SW +ISGY G + + + LF+ M V P+ T SV+ A +G +G+ V
Sbjct: 169 RDVVSWTGLISGYVRTGLFDEAINLFLKMDVV---PNVATFVSVLVACGRMGYLSMGKGV 225
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG V K F + V N L+ MY+ E K+F + +D+VSWT++IS P
Sbjct: 226 HGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQP 285
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++E + M+ G PD I + SVLSACA LG LD G + + R G+ I I L
Sbjct: 286 KDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTAL 345
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNS 499
+DMY+KC CI+ AL +F+ IP++N+ +W +++ GL ++ EAL F M+ ++PN
Sbjct: 346 VDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNE 405
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQ- 556
VT ++IL+AC G + G+ + F L + ++D+ R G + A+N
Sbjct: 406 VTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYNGV 465
Query: 557 -------FNSNER 562
+ +NER
Sbjct: 466 YVLLSNIYATNER 478
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 202/383 (52%), Gaps = 11/383 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD----RISWNAMISG 272
K++H H+I G D V++ + + K V FD + + D + +N +I+
Sbjct: 22 KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVD--YAFDFLNQTDLHVGTLPYNTLIAA 79
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + +++ + PD T V+ A + G +VHG +KMGF D
Sbjct: 80 YASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCD 139
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ V N L+ Y G +VF M +DVVSWT +IS Y + L D+A+ + M+
Sbjct: 140 LYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDV 199
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+P+ T SVL AC +G L +G +H L + +++ N L+DMY KC+C+ +
Sbjct: 200 ---VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCE 256
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A ++F ++PD++++SWTSII GL + ++L F M ++ ++P+ + L S+LSACA
Sbjct: 257 ARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACAS 316
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+GAL G+ + + R G+ +D + AL+DMY +CG ++ A + FN R++ WN L
Sbjct: 317 LGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNAL 376
Query: 571 LTGYAERGQGALAEEFFRKMIDS 593
L G A G G A + F MI +
Sbjct: 377 LGGLAMHGHGHEALKHFELMIGA 399
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 162/309 (52%), Gaps = 4/309 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G EG +H V K + + N+ L + G G A VF +M RD
Sbjct: 111 VLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRD 170
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW LI GY + G FDEA++L+ +M V P+V TF VL CG + L GK VH
Sbjct: 171 VVSWTGLISGYVRTGLFDEAINLFLKM----DVVPNVATFVSVLVACGRMGYLSMGKGVH 226
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V + + + V NAL+ MYVKC L AR +FD +P RD +SW ++ISG + +
Sbjct: 227 GLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPK 286
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L LF M+ V+PD + L+SV+SA +G GR V Y+ + G D+ + L+
Sbjct: 287 DSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALV 346
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E +F+ + ++++ +W ++ +A++ +++M G P+E+
Sbjct: 347 DMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEV 406
Query: 401 TIASVLSAC 409
T ++L+AC
Sbjct: 407 TFLAILTAC 415
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+ +L+ MQ + D L +++ C D G ++ + + + +G A
Sbjct: 286 KDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTAL 345
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A ++F + +R++F+WN L+GG A G EAL ++ M G++P+
Sbjct: 346 VDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIG-AGIRPN 404
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRA 251
TF +L C + G+ +I F + ++ +I + + G L A
Sbjct: 405 EVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEA 461
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 245/490 (50%), Gaps = 46/490 (9%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 50 FDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLG-LLPNSYTFPF 108
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV-------- 254
+L++C K G+++H V++FG++ D+ + +LI+MYV+ G L A+ V
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168
Query: 255 -----------------------FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
FD +P +D +SWNA ISGY E G Y + L LF M +
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK 228
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR+VH ++ GF ++ + N LI +Y G E
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + +KDV+SW T+I Y L +A+ +Q M G P+++T+ S+LSACA
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAH 348
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF + ++++ SW
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G+ H R
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFRS 464
Query: 529 GVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGA 581
+P ++D+ G K A N+ E D W LL G
Sbjct: 465 MTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524
Query: 582 LAEEFFRKMI 591
L E + + +I
Sbjct: 525 LGESYAQNLI 534
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 167/329 (50%), Gaps = 19/329 (5%)
Query: 108 KRGYDEGLYLHSV----------------VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
K G+D LY+H+ V SH V A ++ + G + A
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F ++ +D+ SWN I GYA+ G + EAL L+++M V+PD T VL C
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN-VRPDESTMVTVLSACAQSG 249
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G++VH + G+ ++ +VNALI +Y KCG+L A +F G+ +D ISWN +I
Sbjct: 250 SIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIG 309
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGF 329
GY Y + L+LF M P+ +T+ S++SA +G +GR +H Y+ K G
Sbjct: 310 GYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGV 369
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ S+ LI MY G+ E ++VF M ++ + SW MI + + A + +
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSR 429
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLG 418
M G PD+IT +LSAC+ G LDLG
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 36/357 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V ++ C + G +HS ++
Sbjct: 204 NAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIND 263
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G+L A +F + ++D+ SWN LIGGY + EAL L
Sbjct: 264 HGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLL 323
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G KP+ T +L C + + G+ +HV++ + G + +LI M
Sbjct: 324 FQDML-RSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 382
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A+ VFD M R SWNAMI G+ +G +F MR+ ++PD +T
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 442
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + K+ ++E
Sbjct: 443 VGLLSACSHSGMLDLGRHI-------------------------FRSMTRDYKLMPKLE- 476
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ MI S L +A + ME E PD + S+L AC GN++LG
Sbjct: 477 ----HYGCMIDLXGHSGLFKEAEKMINTMEME---PDGVIWCSLLKACKMHGNVELG 526
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 38/328 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIK---MYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + L++ + F VF ++ ++ W TM +
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH----------QL 424
S P A++ Y M + G +P+ T +L +CA G +LH L
Sbjct: 79 ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138
Query: 425 AMRTGLISY---------------------IIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ T LIS ++ LI Y+ I+ A ++F +IP K
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW + I G EAL F+KMM N++P+ T+V++LSACA+ G++ G+++H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G + + NAL+D+Y +CG ++ A F + +DV +WN L+ GY
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318
Query: 582 LAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A F+ M+ S K N ++ + C
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSAC 346
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 22/222 (9%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK---ALEVFHQI 460
S+L C L +L + +H ++TGL + + L++ D A+ VF I
Sbjct: 7 SLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
+ ++ W ++ G L++ AL + M+ L L PNS T +L +CA+ A G+
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERG 578
++H L+ G D ++ +L+ MYV+ GR++ A + S+ RDV ++ L+TGYA RG
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 579 QGALAEEFFRKM--------------IDSKGNWRKLMGLFRK 606
A + F ++ GN+++ + LF+K
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225
>gi|255549315|ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545148|gb|EEF46658.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 462
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 220/392 (56%), Gaps = 11/392 (2%)
Query: 109 RGYDEGLYLHSVVS-----KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
+ + +G LH+ + + ++LS +L + + G + A +F + ++ F
Sbjct: 55 KSFTKGQQLHAYIITSGNLQNNTYLSTKLA----AFYASCGLMAAAQIIFDGIVLKNSFL 110
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I GYA GF +AL LYQ M G K D +T+P V++ CG + D++ G VH V
Sbjct: 111 WNFMIRGYACNGFPVKALFLYQDMSSFGQ-KADKFTYPFVIKACGDLRDVEFGWRVHCEV 169
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ G+ D+ V N+L+ MY K G++ AR+VFD MP RD SWN MISGY +NG+ + L
Sbjct: 170 VITGFNLDIYVGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPREVL 229
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKM 342
+F +M+++ + D MTL ++ + EK G+E+HGYV++ S + + N LI+M
Sbjct: 230 AIFNLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVRNRHSVFNHFLINSLIEM 289
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + + K+F M KD VSW +MIS Y + +++ + M EG+ PD+IT
Sbjct: 290 YCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTKPDKITF 349
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+VL AC + ++ G +H + G + I +A LIDMY+KC + A VF ++P+
Sbjct: 350 ITVLGACEQITAMEFGRSVHSYLSKKGFSATIFVATALIDMYAKCGNLACAHLVFEEMPE 409
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
KN+ W+++I G ++ EA+ F +M+ N
Sbjct: 410 KNLFCWSAMISGYGIHGMGREAISLFHEMIKN 441
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 211/396 (53%), Gaps = 6/396 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
VL+T + +G+++H ++I G + + + L Y CG + A+++FDG+ +
Sbjct: 47 VLQTLTSIKSFTKGQQLHAYIITSGNLQNNTYLSTKLAAFYASCGLMAAAQIIFDGIVLK 106
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN MI GY NG +K L L+ M D T VI A + D + G VH
Sbjct: 107 NSFLWNFMIRGYACNGFPVKALFLYQDMSSFGQKADKFTYPFVIKACGDLRDVEFGWRVH 166
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
V+ GF+ D+ V N L+ MY FGN + VF RM +D+ SW TMIS Y + P
Sbjct: 167 CEVVITGFNLDIYVGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPR 226
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--GLISYIIIANT 439
+ + + +M+ G D++T+ +L CA L G ++H +R + ++ +I N+
Sbjct: 227 EVLAIFNLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVRNRHSVFNHFLI-NS 285
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
LI+MY KC + A ++F + K+ +SW S+I G N +FE+L F +M+L KP+
Sbjct: 286 LIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTKPD 345
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+T +++L AC +I A+ G+ +H++ + G + F+ AL+DMY +CG + A F
Sbjct: 346 KITFITVLGACEQITAMEFGRSVHSYLSKKGFSATIFVATALIDMYAKCGNLACAHLVFE 405
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
E+++ W+ +++GY G G A F +MI +
Sbjct: 406 EMPEKNLFCWSAMISGYGIHGMGREAISLFHEMIKN 441
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 2/328 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL M D+ +++ C R + G +H V T +L + +
Sbjct: 121 NGFPVKALFLYQDMSSFGQKADKFTYPFVIKACGDLRDVEFGWRVHCEVVITGFNLDIYV 180
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ L+M+ KFG++ A VF +M RDL SWN +I GY K G E L+++ M +G
Sbjct: 181 GNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIG- 239
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRA 251
+ D T +L TC + K+GKE+H +V+R + + ++N+LI MY KC +V A
Sbjct: 240 LSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVRNRHSVFNHFLINSLIEMYCKCNSMVDA 299
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F+ M +D +SWN+MISGY N + + L +F M PD +T +V+ A E +
Sbjct: 300 RKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTKPDKITFITVLGACEQI 359
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR VH Y+ K GFS + V LI MY GN VF M K++ W+ MI
Sbjct: 360 TAMEFGRSVHSYLSKKGFSATIFVATALIDMYAKCGNLACAHLVFEEMPEKNLFCWSAMI 419
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDE 399
S Y + +A+ + M +PDE
Sbjct: 420 SGYGIHGMGREAISLFHEMIKNHIIPDE 447
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 47/488 (9%)
Query: 114 GLYLHSVVS-KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
GL H++ + + + H +V NA +S + GDL A + G+M DR+ SWN +I A
Sbjct: 59 GLPCHALRAFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA 118
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G EAL +YQ M G + P +T VL CG V L G+ H ++ G +
Sbjct: 119 RSGSPGEALEMYQGMLQEG-LAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQ 177
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V N L+ MY KCG + A +FDGMP + +S+ AM+ G + G L LF M
Sbjct: 178 FVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRT 237
Query: 293 LVDPDFMTLSSVIS--ASELVGDE------KLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ D + +SSV+ A GD +L + +H V++ GF D V N L+ +Y
Sbjct: 238 GIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYA 297
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
+E KVF + S +VSW +I+ Y ++A+E + M+ G P+E+T ++
Sbjct: 298 KGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSN 357
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L++C K + + A +F +IP +
Sbjct: 358 MLASCI-----------------------------------KARDVPSARAMFDKIPKPS 382
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
V +W +++ G E + FR+M N++P+ TL ILS+C+R+G GK++H+
Sbjct: 383 VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHS 442
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGAL 582
++R+ + D F+ + L+D+Y +CG++ A FN ERDV WN +++G A
Sbjct: 443 ASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEE 502
Query: 583 AEEFFRKM 590
A +F ++M
Sbjct: 503 AFDFLKQM 510
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 267/541 (49%), Gaps = 46/541 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + +GS +AL+ M + + L +++ C D+G H + K
Sbjct: 111 NTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVK 170
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ N L M+ K G + A +F M + S+ ++GG A+ G D+AL L
Sbjct: 171 VGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRL 230
Query: 184 YQRMFWVGGVKPDVYTFPCVL----RTCGGVPDLKRG----KEVHVHVIRFGYEADVDVV 235
+ RM G ++ D VL + C G ++ R + +H V+R G+ +D V
Sbjct: 231 FARMSRTG-IRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVG 289
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+L+ +Y K + A VF+ + +SWN +I+GY + G Y + + + M+E +
Sbjct: 290 NSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFE 349
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ +T S+++++ D R +
Sbjct: 350 PNEVTYSNMLASCIKARDVPSAR-----------------------------------AM 374
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F ++ V +W T++S Y L + ++ ++ M+ + PD T+A +LS+C+ LGN
Sbjct: 375 FDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNF 434
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++H ++R L + + +A+ LID+YSKC + AL +F+ + +++V+ W S+I GL
Sbjct: 435 ELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGL 494
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+++ S EA F ++M N + P + S+++ CAR+ ++ G+++HA L+ G +
Sbjct: 495 AIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNV 554
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++ +L+DMY + G M A FN +++ AWN ++ GYA+ G G A E F M+ +
Sbjct: 555 YVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTT 614
Query: 594 K 594
K
Sbjct: 615 K 615
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 217/453 (47%), Gaps = 45/453 (9%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L G+++ AL+ M I VD A+ +++ C D + +++++ L
Sbjct: 218 LAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALV 277
Query: 130 VR--------LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
VR +GN+ + ++ K + A VF + + SWN+LI GY + G ++ A+
Sbjct: 278 VRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAM 337
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ + M G +P+ T+ +L +C
Sbjct: 338 EVLEFM-QESGFEPNEVTYSNMLASC---------------------------------- 362
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+K D+ AR +FD +PK +WN ++SGY + + + + LF M+ V PD TL
Sbjct: 363 -IKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTL 421
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ ++S+ +G+ +LG++VH +++ +D+ V + LI +Y G +F+ M
Sbjct: 422 AVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTE 481
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV W +MIS L ++A + + M G P E + AS+++ CA L ++ G ++
Sbjct: 482 RDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQM 541
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G + + +LIDMY+K +D A F+ + KN+++W +I G N
Sbjct: 542 HAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFG 601
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+A+ F M+ KP+SVT +++L+ C+ G
Sbjct: 602 EKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 634
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 2/372 (0%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L+ +K D+ A +F K+ + +WN L+ GY + E + L++RM V+PD
Sbjct: 359 LASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRM-QHQNVQPD 417
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T +L +C + + + GK+VH +R D+ V + LI +Y KCG + A ++F+
Sbjct: 418 RTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFN 477
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M +RD + WN+MISG + + MRE + P + +S+I+ +
Sbjct: 478 MMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQ 537
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR++H V+K G+ +V V LI MY GN ++ F+ M K++V+W MI Y
Sbjct: 538 GRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQ 597
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYII 435
+ +KAVE ++ M PD +T +VL+ C+ G +D + + + G+ +
Sbjct: 598 NGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVE 657
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
LID ++ + V ++P K+ ++L + + + E F K + L
Sbjct: 658 HYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRL 717
Query: 496 KPNSVTLVSILS 507
P + + +LS
Sbjct: 718 DPKNPSPYVLLS 729
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 171/402 (42%), Gaps = 80/402 (19%)
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
C+ R+ G P K H V+ G AD ++N L+ +Y G A F +P
Sbjct: 15 CIKRSGGRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPH- 73
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
P+ + ++ ISA+ GD R++
Sbjct: 74 ----------------------------------PNVYSYNAAISAACRAGDLAAARDLL 99
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G RM ++ VSW T+I+ S P
Sbjct: 100 G-----------------------------------RMPDRNAVSWNTVIAAVARSGSPG 124
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+E YQ M EG P T+ASVLSAC + LD G + H LA++ GL + + N L+
Sbjct: 125 EALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLL 184
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSV 500
MY+KC + A+ +F +P N +S+T+++ GL +AL F +M ++ + V
Sbjct: 185 GMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPV 244
Query: 501 TLVSILSACAR--------IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ S+L ACA+ A+ + IHA +R G D + N+L+D+Y + +M
Sbjct: 245 AVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDE 304
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A F S + + +WNIL+TGY + G A E M +S
Sbjct: 305 AIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQES 346
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 246/495 (49%), Gaps = 42/495 (8%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F + F L +A VF + + +L WN + G+A + AL LY M +G + P
Sbjct: 28 FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LLP 86
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ YTFP +L++C + G+++H HV++ GY+ D+ V +LI+MYV+ G L AR VF
Sbjct: 87 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 146
Query: 256 DG-------------------------------MPKRDRISWNAMISGYFENGEYMKGLM 284
D +P +D +SWNAMISGY E G + L
Sbjct: 147 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 206
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M + V PD T+ SV+SA +LGR+VH ++ GF ++ + N LI +Y+
Sbjct: 207 LFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI 266
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E +F + KDV+SW T+I Y L +A+ +Q M G P+++T+ S
Sbjct: 267 KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 326
Query: 405 VLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+L ACA LG +++G +H + G+ + +LIDMY+KC I+ A +VF I +
Sbjct: 327 ILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN 386
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+++ SW ++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 387 RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446
Query: 522 H---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER--DVSAWNILLTGYAE 576
+I + + ++D+ G K A N+ E D W LL
Sbjct: 447 FRSMKEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 504
Query: 577 RGQGALAEEFFRKMI 591
G L E + + +I
Sbjct: 505 HGNVELGESYAQNLI 519
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 34/351 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + + EG +H V K L + + + +SM+V+ G L A VF + RD
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 161 LFSWNVLIGGYAKAGF-------FD------------------------EALSLYQRMFW 189
+ S+ LI GYA G+ FD EAL L++ M
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V+PD T V+ C ++ G++VH + G+ +++ +VNALI +Y+KCG++
Sbjct: 214 T-NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 272
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+G+ +D ISWN +I GY Y + L+LF M P+ +T+ S++ A
Sbjct: 273 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 332
Query: 310 LVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G ++GR +H Y+ K G ++ S LI MY G+ E ++VF + ++ + SW
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 392
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
MI + + A + + M PD+IT +LSAC+ G LDLG
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 443
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 166/357 (46%), Gaps = 36/357 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V++V C + G +HS +
Sbjct: 189 NAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD 248
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + +++K G++ A +F + +D+ SWN LIGGY + EAL L
Sbjct: 249 HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 308
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G P+ T +L C + ++ G+ +HV++ + G +LI M
Sbjct: 309 FQEML-RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 367
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A+ VFD + R SWNAMI G+ +G +F MR+ ++PD +T
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 427
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + +E K+ ++E
Sbjct: 428 VGLLSACSHSGMLDLGRHI-------------------------FRSMKEDYKITPKLE- 461
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ MI S L +A E ME E PD + S+L AC GN++LG
Sbjct: 462 ----HYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELG 511
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 36/312 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + LI+ + F VF ++ +++ W TM +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S P A+ Y M + G +P+ T +L +CA G ++H ++ G +
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQ-------------------------------IPDK 463
+ +LI MY + ++ A +VF Q IP K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW ++I G + EAL F++MM N++P+ T+VS++SACA+ ++ G+++H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G + + NAL+D+Y++CG ++ A F + +DV +WN L+ GY
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303
Query: 582 LAEEFFRKMIDS 593
A F++M+ S
Sbjct: 304 EALLLFQEMLRS 315
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 210/402 (52%), Gaps = 5/402 (1%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P + TF +L+ C DL G+ VH + G ++ AL MY KC V AR
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR--EVLVDPDFMTLSSVISASELV 311
VFD MP RDR++WNA+++GY NG + + M+ E PD +TL SV+ A
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
REVH + ++ G + V+V ++ Y G E VF M ++ VSW MI
Sbjct: 176 RVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMI 235
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +A+ + M EG + + + L AC LG LD ++H+L +R GL
Sbjct: 236 DGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLK 295
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + N LI YSKCK D A F+++ K ISW ++ILG N S +A F +
Sbjct: 296 SNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFAR 355
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M L N+KP+S TLVS++ A A I + + IH +++R + D ++ AL+DMY +CGR
Sbjct: 356 MQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGR 415
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F+S +R V WN ++ GY G G +A E F +M
Sbjct: 416 VTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEM 457
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 230/497 (46%), Gaps = 5/497 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++LC + G +H+ ++ A +M+ K A VF +M RD
Sbjct: 65 LLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPARD 124
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+WN L+ GYA+ G A+ RM GG +PD T VL C L +EV
Sbjct: 125 RVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACREV 184
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H +R G + V+V A++ Y KCG + AR VFD MP R+ +SWNAMI GY ENG
Sbjct: 185 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNA 244
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ L LF M + VD + + + A +G R VH ++++G +VSV N L
Sbjct: 245 SEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNAL 304
Query: 340 IKMYLSFGNREEGEKVFSRMESKDV-VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
I Y + F+ + K +SW MI + + + A + M+ E PD
Sbjct: 305 ITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKPD 364
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T+ SV+ A A + + +H ++R L I + LIDMYSKC + A ++F
Sbjct: 365 SFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFD 424
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
D++VI+W ++I G + A+ F +M PN T +S+L+AC+ G +
Sbjct: 425 SARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 484
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLTGYA 575
G++ A G+ L+D+ R G++ AW+ Q E +S + +L
Sbjct: 485 GRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGAMLGACK 544
Query: 576 ERGQGALAEEFFRKMID 592
LAEE +K+ +
Sbjct: 545 LHKNVELAEESAQKIFE 561
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 207/458 (45%), Gaps = 18/458 (3%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D LV+++ C R +H+ + V + A L + K G + A VF
Sbjct: 161 DSITLVSVLPACADARVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 220
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R+ SWN +I GYA+ G EAL+L+ RM G D L+ C + L
Sbjct: 221 DWMPVRNSVSWNAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVL-AALQACRELGCL 279
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ VH ++R G +++V V+NALIT Y KC A F+ + K+ RISWNAMI G
Sbjct: 280 DEARRVHELLVRVGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILG 339
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ +NG LF M+ V PD TL SVI A + D R +HGY I+ D
Sbjct: 340 FTQNGCSEDAERLFARMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQD 399
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ V LI MY G K+F + V++W MI Y AVE ++ M+
Sbjct: 400 IYVLTALIDMYSKCGRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKG 459
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
GS+P+E T SVL+AC+ G +D G K GL + TL+D+ + +D+
Sbjct: 460 TGSLPNETTFLSVLAACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDE 519
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSA---- 508
A +P + IS +LG +++ E + + L P +L ++A
Sbjct: 520 AWSFIQNMPIEPGISVYGAMLGACKLHKNVELAEESAQKIFELGPEEGSLSQTMNASMEE 579
Query: 509 ---CARIG--ALMCGKEIHAHALRIGVAFDGFLPNALL 541
C IG + C + +H+ +GFLP L
Sbjct: 580 LARCPGIGEQKVKCLYDSMSHS-------NGFLPAQTL 610
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 2/290 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG+ +AL M + + V + A++ ++ C DE +H ++ +
Sbjct: 232 NAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVR 291
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALS 182
+V + NA ++ + K A + F ++ + SWN +I G+ + G ++A
Sbjct: 292 VGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAER 351
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ RM + VKPD +T V+ + D + + +H + IR + D+ V+ ALI MY
Sbjct: 352 LFARM-QLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMY 410
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + AR +FD R I+WNAMI GY +G + LF M+ P+ T
Sbjct: 411 SKCGRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFL 470
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
SV++A G GR+ + G + L+ + G +E
Sbjct: 471 SVLAACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEA 520
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+P T ++L CA L G+ +HA G+A + AL +MY +C R A
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F+ RD AWN L+ GYA G ALA E +M +G
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEG 156
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 253/505 (50%), Gaps = 9/505 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +AL ++++ + G LH+++ L N ++M+ K G+L HA +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R+L SW +I G ++ F EA+ + M G V P + F +R C + +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSI 122
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ GK++H ++FG +++ V + L MY KCG + A VF+ MP +D +SW AMI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ GE+ + L+ F M + V D L S + A + K GR VH V+K+GF D+
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242
Query: 334 SVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N L MY G+ E VF E ++VVS+T +I Y + +K + + +
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G P+E T +S++ ACA L+ G +LH M+ +++ L+DMY KC ++
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEH 362
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A++ F +I D I+W S++ + +A+ FF +M+ +KPN++T +S+L+ C+
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422
Query: 512 IGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
G + G + ++ GV + ++D+ R GR+K A N E + W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 569 ILLTG---YAERGQGALAEEFFRKM 590
L + ++ G LA E K+
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKL 507
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 208/417 (49%), Gaps = 5/417 (1%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D V++T L+RGK++H +I GY + N L+ MY KCG+L A +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+R+ +SW AMISG +N ++ + + F MR P SS I A +G +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+++H +K G ++ V + L MY G + KVF M KD VSWT MI Y
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++A+ ++ M E D+ + S L AC L G +H ++ G S I
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEAL-IFFRKMML 493
+ N L DMYSK ++ A VF + +NV+S+T +I G + + L +F
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++PN T S++ ACA AL G ++HA ++I D F+ + L+DMY +CG ++ A
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHA 363
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ + AWN L++ + + G G A +FF +M+D K N + L C
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGC 420
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 7/445 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L N +A++ M+ + A + +R C + G +H + K
Sbjct: 78 ISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGI 137
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ +G+ M+ K G + A VF +M +D SW +I GY+K G F+EAL +++
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKK 197
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M V D + L CG + K G+ VH V++ G+E+D+ V NAL MY K G
Sbjct: 198 MI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256
Query: 247 DLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
D+ A VF G+ R+ +S+ +I GY E + KGL +F+ +R ++P+ T SS+
Sbjct: 257 DMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
I A + G ++H V+K+ F +D V + L+ MY G E + F +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE 375
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQ 423
++W +++S + L A++ ++ M G P+ IT S+L+ C+ G ++ G+ +
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYS 435
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSF 482
+ G++ + +ID+ + + +A E +++P + N W S + R++
Sbjct: 436 MDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495
Query: 483 EALIFFRKMMLNLKPNSVTLVSILS 507
+ K ++ L+P + + +LS
Sbjct: 496 MGKLAAEK-LVKLEPKNSGALVLLS 519
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 252/477 (52%), Gaps = 19/477 (3%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
DLG+ +F ++ +F WN +I G++ + L Y R+ GV PD +TFP +L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLR-NHGVIPDRHTFPLLL 111
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ + + + + + H+++FG + D V N+L++ + CG + +R +F K+D +
Sbjct: 112 KAFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVV 170
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SW A+I+G NG ++ L F+ MR V+ D +T+ SV+ A+ ++ D GR VHG+
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 325 IKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
++ G DV V + L+ MY G ++ KVF+ M ++++VSW +I+ Y +A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ +Q M EG P++ T+ S L+ACA LG+LD G LH+ R+ L + L+DM
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDM 350
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC C+D+AL VF ++P K+V WT++I GL + + +L F +M+ + ++PN VT
Sbjct: 351 YSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTF 410
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQF 557
+ +LSACA G + G E+ R+ + PN ++D+ R GR++ A
Sbjct: 411 LGVLSACAHGGLVDEGLEL----FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFI 466
Query: 558 NS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI----DSKGNWRKLMGLFRKCQ 608
S E W L +G L E +I G + L L+ +CQ
Sbjct: 467 ESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQ 523
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 27/407 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +S F G + + +F + +D+ SW LI G + G EAL + M GV
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR-SSGV 200
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRAR 252
+ D T VL + D+ G+ VH + G DV V +AL+ MY KCG A
Sbjct: 201 EVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ MP R+ +SW A+I+GY + Y + L +F M ++P+ T++S ++A +G
Sbjct: 261 KVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H YV + + + L+ MY G +E VF ++ +KDV WT MI+
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 373 --CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
G L ++ + M P+ +T VLSACA G +D G++L +L +
Sbjct: 381 GLAMRGDAL--SSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM----I 434
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
Y + N ++D+ + +++A++ +P + W ++ G + +++FE
Sbjct: 435 CDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMI-HKAFEL 493
Query: 485 LIFFRKMMLNLKPNS----VTLVSILSAC------ARIGALMCGKEI 521
++ L+P+ + L ++ S C A + LM GK +
Sbjct: 494 GEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGV 540
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL- 128
CL NG +AL+ M+ + VDE +V+++ R G ++H ++ +
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V +G+A + M+ K G A VF +M R+L SW LI GY + + EAL ++Q M
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ G++P+ T L C + L +G+ +H +V R + + AL+ MY KCG +
Sbjct: 299 -IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCV 357
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
A LVF+ +P +D W AMI+G G+ + L LF M V P+ +T V+SA
Sbjct: 358 DEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSA 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++ALK M I ++ + + + C D+G +LH V ++ L+ +LG A
Sbjct: 288 KEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTAL 347
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A VF K+ +D++ W +I G A G +L+L+ +M V+P+
Sbjct: 348 VDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMI-RSRVQPN 406
Query: 197 VYTFPCVLRTC--GGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
TF VL C GG+ D G E+ + + + E +VD ++ + + G L A
Sbjct: 407 GVTFLGVLSACAHGGLVD--EGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIK 464
Query: 254 VFDGMPKRDRIS-WNAMISG-----YFENGEYM 280
+ MP W A+ SG FE GE++
Sbjct: 465 FIESMPMEPTPGVWGALFSGCMIHKAFELGEHI 497
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 250/496 (50%), Gaps = 15/496 (3%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV + C +EGL +H + ++ + N+ LSM+ D+ A +F +MC
Sbjct: 153 LVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMC 211
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+RD+ SW+V+IGGY + G AL L+ M ++ D T VL+ C D+ G+
Sbjct: 212 ERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGR 271
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH VI G + D+ V N++I MY K D A F+ MP R+ +SWN++ISG
Sbjct: 272 SVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTE 331
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
++ + L LF M + D +TL +++ + + D + +H VI+ G+ + V N
Sbjct: 332 KHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVIN 391
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI Y E K+F R+++KD VSW+ MI+ + PD+A+ +Q M P
Sbjct: 392 SLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP 451
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +TI S+L A + +L H + +R GL + + + ++DMY+KC I + + F
Sbjct: 452 NGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAF 511
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
QIP+KN++SW ++I +N + +AL +M L+ LKPN VT +S+LSAC+ G +
Sbjct: 512 DQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVE 571
Query: 517 CG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSA-W 567
G + H + G+ + ++DM R G++ A N + RD + W
Sbjct: 572 EGLSFFENMVQDHGVEPGLEH----YSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLW 627
Query: 568 NILLTGYAERGQGALA 583
LL+ G L
Sbjct: 628 GALLSACRSSGNSRLG 643
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 238/469 (50%), Gaps = 5/469 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ + K GN+ ++K G L A +VF M RD SWN++I G+
Sbjct: 67 HGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHL 126
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G D L + R V +P+V T + C + ++ G ++H ++IR G+
Sbjct: 127 SRGASDXGLWWF-RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIP 185
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMRE 291
V N+L++MY D+ RA +FD M +RD ISW+ MI GY + GE L LF+ M
Sbjct: 186 SVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSN 244
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
++ D +T+ SV+ A GD +GR VHG VI G D+ V N +I MY + E
Sbjct: 245 AXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHES 304
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
K F+ M ++ VSW ++IS + +A+ + M G DE+T+ ++L +C
Sbjct: 305 AFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY 364
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ +H + +R G + N+LID YSKC I+ A ++F ++ K+ +SW+++
Sbjct: 365 FVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAM 424
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I G + EA+ F++M KPN VT++S+L A + L K H +R G+
Sbjct: 425 IAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGL 484
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
A + + A+LDMY +CG + + F+ E+++ +W ++ G
Sbjct: 485 AAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNG 533
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 225/435 (51%), Gaps = 7/435 (1%)
Query: 161 LFSWNVLIGGYAKAGFFD--EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
L +WN+ I ++D EA S Y +M G D +L+ C +P ++ GK
Sbjct: 12 LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP-VRHGKS 70
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H +++ G+++ N+ Y+K G L A VFD M RD +SWN MI G+ G
Sbjct: 71 IHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGA 130
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
GL F R + +P+ TL I A +G + G ++HGY+I+ GF D SV N
Sbjct: 131 SDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNS 190
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ MY + E E++F M +DV+SW+ MI Y + A++ + M + +
Sbjct: 191 LLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIEL 249
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D IT+ SVL ACA G++ +G +H + + GL + + N++IDMYSK + A + F
Sbjct: 250 DGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAF 309
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
+++P +N +SW SII GL + EAL F M + + VTLV++L +C
Sbjct: 310 NEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPF 369
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
K IH+ +R G + F+ N+L+D Y +C ++ AW F+ +D +W+ ++ G+
Sbjct: 370 QCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFN 429
Query: 576 ERGQGALAEEFFRKM 590
G+ A F++M
Sbjct: 430 HCGKPDEAIALFQEM 444
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 12/267 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ L +AL SM + DE LVNL++ C++ + ++HS+V +
Sbjct: 321 NSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIR 380
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L+ + N+ + + K + AW +F ++ +D SW+ +I G+ G DEA++L
Sbjct: 381 WGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIAL 440
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+Q M KP+ T +L DLKR K H IR G A+V V A++ MY
Sbjct: 441 FQEMN-QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYA 499
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ +R FD +P+++ +SW AMI+ NG L L M+ + P+ +T S
Sbjct: 500 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLS 559
Query: 304 VISASELVGDEKLGREVHGYVIKMGFS 330
V+SA HG +++ G S
Sbjct: 560 VLSACS-----------HGGLVEEGLS 575
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 271/546 (49%), Gaps = 25/546 (4%)
Query: 66 RLNELCLNGSLEQALKYL------DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
R++ C G L+++ + + D + +AL L++ ++ + G +H
Sbjct: 404 RISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ 463
Query: 120 VVSKTMSHLSVRLGN------AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+VS S RL N ++M+ G + +VF + ++LF WN +I Y++
Sbjct: 464 LVSG-----STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 518
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+DE L + M + PD +T+PCV++ C G+ D+ G VH V++ G DV
Sbjct: 519 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 578
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL++ Y G + A +FD MP+R+ +SWN+MI + +NG + +L M E
Sbjct: 579 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 638
Query: 294 VD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
D PD TL +V+ + LG+ VHG+ +K+ ++ + N L+ MY G
Sbjct: 639 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 698
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLS 407
+ +F +K+VVSW TM+ + + + M A G DE+TI + +
Sbjct: 699 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 758
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
C L +LH +++ + ++AN + Y+KC + A VFH I K V S
Sbjct: 759 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 818
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I G +N +L +M ++ L P+S T+ S+LSAC+++ +L GKE+H +
Sbjct: 819 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 878
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
R + D F+ ++L +Y+ CG + F++ E + + +WN ++TGY + G A
Sbjct: 879 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 938
Query: 586 FFRKMI 591
FR+M+
Sbjct: 939 VFRQMV 944
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 258/519 (49%), Gaps = 15/519 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C GL +H +V KT V +GNA +S + G + A +F M +R+
Sbjct: 548 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 607
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGK 217
L SWN +I ++ GF +E+ L M G PDV T VL C ++ GK
Sbjct: 608 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 667
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH ++ + ++ + NAL+ MY KCG + A+++F ++ +SWN M+ G+ G
Sbjct: 668 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 727
Query: 278 EYMKGLMLFIMMREVL-----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ F ++R++L V D +T+ + + +E+H Y +K F +
Sbjct: 728 DTHG---TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 784
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N + Y G+ ++VF + SK V SW +I + S P +++ + M+
Sbjct: 785 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 844
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G +PD T+ S+LSAC+ L +L LG ++H +R L + + +++ +Y C +
Sbjct: 845 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 904
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
+F + DK+++SW ++I G N AL FR+M+L ++ ++++ + AC+
Sbjct: 905 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 964
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ +L G+E HA+AL+ + D F+ +L+DMY + G + + FN E+ ++WN +
Sbjct: 965 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 1024
Query: 571 LTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKC 607
+ GY G A + F +M + N L +G+ C
Sbjct: 1025 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 1063
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 256/523 (48%), Gaps = 18/523 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN----ICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
NS + NG E++ L M E N D LV ++ +C +R G +H
Sbjct: 612 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 671
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
K + L NA + M+ K G + +A +F ++++ SWN ++GG++ G
Sbjct: 672 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 731
Query: 180 ALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+ ++M G VK D T + C L KE+H + ++ + + V NA
Sbjct: 732 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 791
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y KCG L A+ VF G+ + SWNA+I G+ ++ + L + M+ + PD
Sbjct: 792 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 851
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T+ S++SA + +LG+EVHG++I+ D+ V ++ +Y+ G + +F
Sbjct: 852 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 911
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
ME K +VSW T+I+ Y + PD+A+ ++ M G I++ V AC+ L +L LG
Sbjct: 912 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 971
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ H A++ L IA +LIDMY+K I ++ +VF+ + +K+ SW ++I+G ++
Sbjct: 972 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 1031
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ EA+ F +M P+ +T + +L+AC G + G + ++ +F G P
Sbjct: 1032 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR---YLDQMKSSF-GLKP 1087
Query: 538 N-----ALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILLT 572
N ++DM R G++ A + S E DV W LL+
Sbjct: 1088 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 1130
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 234/451 (51%), Gaps = 5/451 (1%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G + A RD F NV+I G A AG AL+ Y M G +PD +TFP V
Sbjct: 56 GRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAG-ARPDRFTFPVV 114
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L+ C + L G+ H IR G A DV N+L+ Y + G + A VFDGMP RD
Sbjct: 115 LKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARD 174
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVH 321
++WN+M+ GY NG L+ F M E L V D + + + ++A L GREVH
Sbjct: 175 VVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVH 234
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
YVI+ G DV V ++ MY G+ E VF+ M S+ VV+W MI Y + P+
Sbjct: 235 AYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPE 294
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A + + M+AEG + +T ++L+ACA + G +H R + ++++ L+
Sbjct: 295 EAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALL 354
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
+MYSK + + +VF Q+ K ++SW ++I EA+ F ++ L P+
Sbjct: 355 EMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYF 414
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
T+ +++ A +G L +++H++ +R+G + + NA++ MY RCG + + F+
Sbjct: 415 TMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKM 474
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DV +WN ++ GYA GQG A E F +M
Sbjct: 475 AAKDVISWNTMIMGYAIHGQGRSALEMFSEM 505
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 211/415 (50%), Gaps = 2/415 (0%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+++ C DEG HS + ++ V GN+ L+ + + G + A VF M R
Sbjct: 114 VLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR 173
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ +WN ++ GY G AL ++ M V+ D L C L +G+EV
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H +VIR G E DV V +++ MY KCGD+ A VF MP R ++WN MI GY N
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ F+ M+ + +T ++++A GR VHGY+ + F V + L
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
++MY G + EKVF +M +K +VSW MI+ Y + +A+ + + + PD
Sbjct: 354 LEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDY 413
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T+++V+ A LG L ++H +R G +I N ++ MY++C + + E+F +
Sbjct: 414 FTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDK 473
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+ K+VISW ++I+G ++ + AL F +M N L+PN T VS+L+AC+ G
Sbjct: 474 MAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSG 528
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/501 (29%), Positives = 250/501 (49%), Gaps = 6/501 (1%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
++ L ++V C R +G+ +HS + K + L N LS++ K + A +
Sbjct: 14 IEYSLLKDIVSFCN-SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQL 72
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M RD+ SW +L+ Y K G +EAL L+ M + G P+ +T LR+C + +
Sbjct: 73 FDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSML-ISGEYPNEFTLSTALRSCSALRE 131
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
G V + G++++ + +ALI Y KCG A VF+ M D +SW M+S
Sbjct: 132 FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSS 191
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ E G + + L L+ M + V P+ T +++AS +G G+ VH +++ +
Sbjct: 192 FVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELN 250
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ + L+ MY + E+ KV DV WT +IS + S+ +A+ + ME
Sbjct: 251 LVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET 310
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC-KCID 451
G +P+ T + +L+AC+ + LDLG ++H + GL + + + N+L+DMY KC I+
Sbjct: 311 SGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE 370
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A+ F I NVISWTS+I G + E++ F M + ++PNS TL +IL AC
Sbjct: 371 DAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACG 430
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNI 569
I +L +++H + ++ D + NAL+D Y G + AW+ + RDV +
Sbjct: 431 TIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTS 490
Query: 570 LLTGYAERGQGALAEEFFRKM 590
L T + G +A M
Sbjct: 491 LATRINQTGNHEMALNIITHM 511
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 265/522 (50%), Gaps = 9/522 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ E+AL+ DSM +E L +R C R ++ G ++V+K+ + LG
Sbjct: 95 GNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLG 154
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + + K G A+ VF M + D+ SW +++ + +AG + +AL LY RM GV
Sbjct: 155 SALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQT-GV 213
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ +TF +L L GK VH H++ + E ++ + AL+ MY KC + A
Sbjct: 214 APNEFTFVKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVK 272
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + D W A+ISG+ ++ ++ + + F M V P+ T S +++A +
Sbjct: 273 VSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILA 332
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMIS 372
LG+++H V+ G +DVSV N L+ MY+ N E+ + F + S +V+SWT++I+
Sbjct: 333 LDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIA 392
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ L +++++ + M+ G P+ T++++L AC + +L KLH ++ +
Sbjct: 393 GFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADN 452
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN---NRSFEALIFFR 489
+++ N L+D Y+ +D A V + ++VI++TS L R+N N I
Sbjct: 453 DVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTS--LATRINQTGNHEMALNIITH 510
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+++ + +L S LSA A I + GK++H ++++ G+ + N L+D+Y +CG
Sbjct: 511 MNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGC 570
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A F E D +WN L+ G A G + A F M
Sbjct: 571 IHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDM 612
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 265/528 (50%), Gaps = 15/528 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
GS QAL+ M + + +E V L+ + G + G +H+ + L++ L
Sbjct: 196 GSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSF-LGLNYGKLVHAHLMMWRIELNLVLK 254
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K + A V + D+F W +I G+ ++ F EA++ + M GV
Sbjct: 255 TALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEM-ETSGV 313
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR-AR 252
P+ +T+ +L C + L GK++H V+ G E DV V N+L+ MY+KC +++ A
Sbjct: 314 VPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F G+ + ISW ++I+G+ E+G + + +F M+ V V P+ TLS+++ A +
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIK 433
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
R++HGY+IK +DV V N L+ Y G ++ V S M+ +DV+++T++ +
Sbjct: 434 SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLAT 493
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + A+ M + D ++AS LSA A + ++ G +LH ++++GL S
Sbjct: 494 RINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGS 553
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I ++N L+D+Y KC CI A F +I + + +SW +I GL N AL F M
Sbjct: 554 WISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMR 613
Query: 493 L-NLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVR 546
L ++P+ +T + +L AC+ G + G + H +R D ++ L+D+ R
Sbjct: 614 LAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIR--PQLDHYV--CLVDLLGR 669
Query: 547 CGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
GR++ A N + + D + LL G L E R+ ++
Sbjct: 670 AGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLE 717
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 156/380 (41%), Gaps = 51/380 (13%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+++K +MQ + + + L ++ C + + LH + K + V +
Sbjct: 397 HGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVV 456
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA + + G + AW+V M RD+ ++ L + G + AL++ M
Sbjct: 457 GNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMN-KDD 515
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+ D ++ L G+P ++ GK++H + ++ G + + V N L+ +Y KCG + A
Sbjct: 516 VRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAH 575
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F + + D +SWN +I G NG L F MR V+PD +T V+ A G
Sbjct: 576 RSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGG 635
Query: 313 DEKLG-------REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+G RE HG ++ D VC L+ + G EE V M K
Sbjct: 636 LVDMGLDYFQSMREKHGIRPQL----DHYVC--LVDLLGRAGRLEEAMNVIETMPFK--- 686
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
PD + ++L AC GN+ LG + +
Sbjct: 687 -------------------------------PDALIYKTLLGACKLHGNIPLGEHMARQG 715
Query: 426 MR---TGLISYIIIANTLID 442
+ + Y+++AN D
Sbjct: 716 LELDPSDPAFYVLLANLYDD 735
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
GI +H ++ G + ++N L+ +Y KC + +A ++F ++P ++V SWT ++
Sbjct: 34 GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93
Query: 478 NNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
EAL F M+++ + PN TL + L +C+ + G A + G + L
Sbjct: 94 IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+AL+D Y +CG + A+ F N D+ +W ++++ + E G + A + + +MI +
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQT 211
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 253/548 (46%), Gaps = 39/548 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C G + M + D L L++ C G+ +H++ K
Sbjct: 132 NALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVK 191
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + VR G+A + M+ K L A + F M +R+ SW +I G + + L L
Sbjct: 192 TGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLEL 251
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
R C + L +++H H I+ + +D V A++ +Y
Sbjct: 252 LCR--------------------CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYA 291
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K LV AR F G+P + NAM+ G G + + LF M + ++LS
Sbjct: 292 KADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSG 351
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V SA V GF DV V N ++ +Y E VF ME +D
Sbjct: 352 VFSACAEV---------------KGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 396
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW T+I+ E + + + M G D+ T SVL ACA L +L+ G+ +H
Sbjct: 397 SVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHG 456
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A+++GL +++T++DMY KC I +AL++ +I + ++SW SII G LN +S E
Sbjct: 457 KAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEE 516
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A FF +M+ + +KP+ T ++L +CA + + GK+IH ++ + D F+ + L+D
Sbjct: 517 AQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVD 576
Query: 543 MYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRK 599
MY +CG M + F ++ D +WN ++ GYA GQG A E F + + N
Sbjct: 577 MYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHAT 636
Query: 600 LMGLFRKC 607
+ + R C
Sbjct: 637 FVAVLRAC 644
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 232/474 (48%), Gaps = 37/474 (7%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V TM H N L+ + GD G A + M D D+ SWN L+ GY + G F +
Sbjct: 88 VFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDL 147
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L M G V PD T +L+ CGG+ DL G ++H ++ G E DV +AL+
Sbjct: 148 VGLSIEMARCG-VAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVD 206
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC L A F GM +R+ +SW A+I+G +N +YM+GL L + +
Sbjct: 207 MYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAI------TC 260
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
LS+ R++H + IK FS D V ++ +Y + + + F +
Sbjct: 261 LST-------------ARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLP 307
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ V + M+ + L +A++ +Q M G ++++ V SACA + D+
Sbjct: 308 NHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVD-- 365
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+ + N ++D+Y KCK + +A VF ++ ++ +SW +II L N
Sbjct: 366 -------------VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNEC 412
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ ++ +M+ + ++ + T S+L ACA + +L G +H A++ G+ D F+ +
Sbjct: 413 YEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 472
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DMY +CG + A + +++ +WN ++ G++ Q A++FF +M+D
Sbjct: 473 VVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLD 526
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 219/456 (48%), Gaps = 33/456 (7%)
Query: 75 SLEQALKYLDSMQELNI---------CV-DEDALVNLVRLCEWKR----GYDEGLYLHSV 120
SLE AL + M E N CV +E + L LC K L+ H++
Sbjct: 213 SLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITCLSTARQLHAHAI 272
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+K S V G A + ++ K L A F + + + + N ++ G + G EA
Sbjct: 273 KNKFSSDRVV--GTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEA 330
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+Q M G+ V + V C V G++ DV V NA++
Sbjct: 331 MQLFQFMTR-SGIGFGVVSLSGVFSACAEVK---------------GFDVDVCVRNAILD 374
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y KC LV A LVF M +RD +SWN +I+ +N Y ++ M ++ D T
Sbjct: 375 LYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFT 434
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
SV+ A + + G VHG IK G D V + ++ MY G E K+ R+
Sbjct: 435 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+++VSW ++I+ + + ++A + + M G PD T A+VL +CA L ++LG +
Sbjct: 495 GQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQ 554
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ ++ I++TL+DMY+KC + + +F ++ + +SW ++I G L+ +
Sbjct: 555 IHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQ 614
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGAL 515
FEAL +F R N+ PN T V++L AC+ +G L
Sbjct: 615 GFEALEMFERTQKANVAPNHATFVAVLRACSHVGLL 650
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 168/410 (40%), Gaps = 69/410 (16%)
Query: 199 TFPCVLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF V + C G L G+ H ++ G+ + V N L+ MY +CG A VFD
Sbjct: 31 TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90
Query: 257 GMPKRDR-------------------------------ISWNAMISGYFENGEYMKGLML 285
MP RD +SWNA++SGY + G + + L
Sbjct: 91 TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
I M V PD TL+ ++ A + D LG ++H +K G DV + L+ MY
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
+ E+ F M ++ VSW +I+ V+ Q M +
Sbjct: 211 CRSLEDALHFFHGMGERNSVSWGAVIA---------GCVQNEQYMRG----------LEL 251
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L C + L +LH A++ S ++ ++D+Y+K + A F +P+ V
Sbjct: 252 LCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTV 311
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAH 524
+ ++++GL EA+ F+ M + + V+L + SACA +
Sbjct: 312 ETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK----------- 360
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
G D + NA+LD+Y +C + A+ F E RD +WN ++
Sbjct: 361 ----GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAA 406
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 242/490 (49%), Gaps = 43/490 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + +L WN ++ G A + L +Y RM G V P+ YTFP
Sbjct: 30 FDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHV-PNAYTFPF 88
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADV-----------------------------D 233
+L++C + G+++H V++ G E D D
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 234 VVN--ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
VV+ ALIT Y GD+ AR VFD + +RD +SWNAMI+GY EN Y + L LF M
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYV-IKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD TL SV+SA G +LGRE+H V GF + + N I +Y G+ E
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+F + KDVVSW T+I Y L +A+ +Q M G P+++T+ SVL ACA
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 411 CLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ + K++ SW
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
++I G ++ R+ A F +M N ++P+ +TLV +LSAC+ G L G+ I +
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448
Query: 528 ---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGAL 582
I + + ++D+ G K A + E D W LL G L
Sbjct: 449 DYNITPKLEHY--GCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLEL 506
Query: 583 AEEFFRKMID 592
AE F +K+++
Sbjct: 507 AESFAQKLME 516
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 45/315 (14%)
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
H ++K G + + L+++ + F VF + +++ W TM+
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG------- 429
S +E Y M + G +P+ T +L +CA + G ++H M+ G
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 430 ---LISY---------------------IIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
LIS ++ LI Y+ + A +VF I +++V
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
+SW ++I G N EAL F++MM N++P+ TLVS+LSACA+ G++ G+EIH
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT- 239
Query: 525 ALRIGVAFDGF-----LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
+ GF + NA + +Y +CG ++ A F + +DV +WN L+ GY
Sbjct: 240 ---LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296
Query: 579 QGALAEEFFRKMIDS 593
A F++M+ S
Sbjct: 297 LYKEALLLFQEMLRS 311
>gi|449460860|ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cucumis sativus]
Length = 489
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 226/385 (58%), Gaps = 10/385 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L+ L L++ + + +D + +L+ LC + G+ +H ++ + +V + +
Sbjct: 34 ALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISS 93
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDL--FSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
L ++ FG + A VF +M +R+ F+WN LI GYA+ G +++AL+LY +M G
Sbjct: 94 KLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQM-EEEG 152
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PD +TFP VL+ CGG+ ++ G+ VH HV+R G+ DV V+NAL+ MY KCG +VRAR
Sbjct: 153 VEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRAR 212
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D +SWN+M++GY +G + + L +F M + +PD + LS+++S +
Sbjct: 213 KVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSN---IS 269
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K +HG+VI+ G ++S+ N LI MY G + +F +M KD+VSW ++IS
Sbjct: 270 SMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIIS 329
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-RTGLI 431
+ S +A+ +++ME+ G PD +T S+LS CA LG + G KL+ L + G+
Sbjct: 330 AHFNSA---EALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGGKLYFLMKGKYGIR 386
Query: 432 SYIIIANTLIDMYSKCKCIDKALEV 456
I ++++Y + I++A ++
Sbjct: 387 PTIEHYACMVNLYGRAGMIEEAYKI 411
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 156/287 (54%), Gaps = 9/287 (3%)
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ +DP+ SS++ + G +H + +V + + L+++Y SFG E+
Sbjct: 50 LFIDPEI--FSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMED 107
Query: 352 GEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+VF M +++ +W ++IS Y L + A+ Y ME EG PD T VL AC
Sbjct: 108 AHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKAC 167
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+G++ +G +H+ +R+G + + N L+DMYSKC CI +A +VF QI K+++SW
Sbjct: 168 GGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWN 227
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S++ G + FEAL F +M+ +P+SV L ++LS I ++ IH +R
Sbjct: 228 SMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS---NISSMKFKLHIHGWVIRH 284
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPA-WNQFNSNERDVSAWNILLTGY 574
GV ++ + N+L+ MY +CG++ A W ++D+ +WN +++ +
Sbjct: 285 GVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAH 331
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G D +S+L C L + GI++H+L L + I++ L+ +Y+ ++ A
Sbjct: 49 GLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDA 108
Query: 454 LEVFHQIPDKN--VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACA 510
+VF ++ ++N +W S+I G +AL ++F+ ++P++ T +L AC
Sbjct: 109 HQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACG 168
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
IG++ G+ +H H +R G A D F+ NAL+DMY +CG + A F+ E +D+ +WN
Sbjct: 169 GIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNS 228
Query: 570 LLTGYAERGQGALAEEFFRKMI 591
+LTGY G A + F +MI
Sbjct: 229 MLTGYTRHGLHFEALDIFDQMI 250
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 229/419 (54%), Gaps = 21/419 (5%)
Query: 153 FGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F K D+ ++ SWN +I A+ G EAL + + +G + P +FPC +++C +
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTIKSCSALC 2029
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
DL G+ H FG+E D+ V +ALI MY KCG L AR +FD +P R+ +SW +MI+
Sbjct: 2030 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMIT 2089
Query: 272 GYFENGEYMKGLMLF--IMMREVLVDP------DFMTLSSVISASELVGDEKLGREVHGY 323
GY +N + L+LF + E V+ D + + SV+SA V + + VHG+
Sbjct: 2090 GYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 2149
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
V+K GF + V N L+ Y G +KVF ME KD +SW +MI+ Y S L +A
Sbjct: 2150 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 2209
Query: 384 VETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+E + M+ G + +T+++VL ACA G L G +H ++ L + + ++ID
Sbjct: 2210 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 2269
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVT 501
MY KC ++ A + F ++ +KNV SWT+++ G ++ R+ EAL IF++ + +KPN +T
Sbjct: 2270 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 2329
Query: 502 LVSILSACARIGALMCG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
VS+L+AC+ G + G H + + G+ G ++D++ R G + A+N
Sbjct: 2330 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG----CMVDLFGRAGCLNEAYN 2384
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 189/389 (48%), Gaps = 44/389 (11%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C + K +++H +IR G D + LI +Y G + A L+F +
Sbjct: 33 LLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+WN +I NG + LML+ M + D T VI A LG+ VHG
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 323 YVIKMGFSDDVSVCNPLIKMY-------------------------------LSFGNREE 351
+IK GFS DV V N LI Y +S G+ +E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++F + SK+VVSWT MI+ Y + P++A+E ++ M+AE P+E T+ S++ AC
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+G L LG +H A++ + + + LIDMYSKC I A+EVF +P K++ +W S+
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
I L ++ EAL F +M +N+KP+++T + +L AC I + KE A+ R+
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV---KEGCAYFTRMTQ 386
Query: 531 AFDGFLP-----NALLDMYVRCGRMKPAW 554
+ G P + ++Y R + A+
Sbjct: 387 HY-GIAPIPEHYECMTELYARSNNLDEAF 414
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 183/356 (51%), Gaps = 13/356 (3%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SWN++I+ G+ ++ L F +R++ + P + I + + D GR H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
GF D+ V + LI MY G ++ +F + ++VVSWT+MI+ Y + D A+
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 2101
Query: 385 -------ETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
E +E ++P D + + SVLSAC+ + + +H ++ G I +
Sbjct: 2102 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 2161
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LN 494
NTL+D Y+KC + +VF + +K+ ISW S+I + S EAL F M+ +
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ N+VTL ++L ACA GAL GK IH +++ + ++ + +++DMY +CGR++ A
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 2281
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ E++V +W ++ GY G+ A + F KM+ + K N+ + + C
Sbjct: 2282 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 220/467 (47%), Gaps = 37/467 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +L G +AL+ S+++L + + ++ C L +VS
Sbjct: 1984 NSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS---------ALCDLVSG 2034
Query: 124 TMSH---------LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
MSH + + +A + M+ K G L A +F ++ R++ SW +I GY +
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 175 GFFDEALSLYQRMFWV-------GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
D AL L++ V D VL C V + VH V++ G
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 2154
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ + V N L+ Y KCG + ++ VFD M ++D ISWN+MI+ Y ++G + L +F
Sbjct: 2155 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 2214
Query: 288 -MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+R V V + +TLS+V+ A G + G+ +H VIKM +V V +I MY
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 2274
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E +K F RM+ K+V SWT M++ Y +A++ + M G P+ IT SVL
Sbjct: 2275 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 2334
Query: 407 SACACLGNLDLG-----IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+AC+ G ++ G H+ + G+ Y ++D++ + C+++A + ++
Sbjct: 2335 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMK 2390
Query: 462 DK-NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
K + + W S++ R++ I +K + L P++ +LS
Sbjct: 2391 MKPDFVVWGSLLGACRIHKNVDLGEIAAQK-LFELDPDNCGYYVLLS 2436
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 35/388 (9%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + ++ G + +A +F ++ + F+WN++I G ++AL LY+ M
Sbjct: 61 LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV-CQ 119
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG----- 246
G+ D +TFP V++ C + GK VH +I++G+ DV V N LI Y KCG
Sbjct: 120 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 247 --------------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
DL AR +FD +P ++ +SW AMI+GY N +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF M+ + P+ T+ S+I A +G LGR +H Y IK V + LI
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALI 299
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ ++ +VF M K + +W +MI+ L +A+ + ME PD I
Sbjct: 300 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 359
Query: 401 TIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T VL AC + N+ G ++ G+ + ++Y++ +D+A + +
Sbjct: 360 TFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKE 419
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIF 487
+ ++ + SI R ++ L+F
Sbjct: 420 V--GSLANSPSICFDARAKQVAWTQLLF 445
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++H +I+ G S+D + LI +Y + G +F ++++ +W +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L ++A+ Y+ M +G D+ T V+ AC ++DLG +H ++ G + +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 438 NTLIDMYSKC-----------------------------KCID--KALEVFHQIPDKNVI 466
N LID Y KC C D +A +F +IP KNV+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SWT++I G N + EAL F++M N+ PN T+VS++ AC +G L G+ IH +A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAE 584
++ + +L AL+DMY +CG +K A F + R + WN ++T G G A
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 585 EFFRKM--IDSKGNWRKLMGLFRKC 607
F +M ++ K + +G+ C
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCAC 368
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 269/505 (53%), Gaps = 8/505 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
+DEG +H+ K +V +G++ ++++VK G + A VF ++++ WN ++
Sbjct: 339 AFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILY 398
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G+ + +E + ++Q M ++ D +TF VL C + L G++VH I+ G +
Sbjct: 399 GFVQNELQEETIQMFQYMRR-ADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMD 457
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
AD+ V NA++ MY K G + A+ +F +P +D +SWNA+I G N E + + + M
Sbjct: 458 ADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRM 517
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ + D ++ ++ I+A + + G+++H IK + +V + LI +Y FG+
Sbjct: 518 KFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E KV + +++ +V +I+ + D+A+E +Q + +G P T S+LS C
Sbjct: 578 ESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGC 637
Query: 410 ACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVIS 467
+ +G ++H +++ +++ + +L+ +Y KCK ++ A ++ ++PD KN++
Sbjct: 638 TRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVE 697
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
WT+ I G N S ++L+ F +M +++ + T S+L AC+ + AL GKEIH +
Sbjct: 698 WTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIV 757
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAE 584
+ G +AL+DMY +CG + ++ F N +++ WN ++ G+A+ G A
Sbjct: 758 KSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEAL 817
Query: 585 EFFRKMIDS--KGNWRKLMGLFRKC 607
F+KM +S K + L+G+ C
Sbjct: 818 LLFQKMQESQIKPDDVTLLGVLIAC 842
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 238/508 (46%), Gaps = 50/508 (9%)
Query: 98 LVNLVRLC-EWKRGYDEGLY----------LHSVVSKTMSHLSVRLGNAFLSMFVKFGDL 146
L +L R C +D GL+ LH+ + + L RLG+A + ++ + G +
Sbjct: 45 LASLSRECRHAHHPFDAGLHRTHQARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRV 104
Query: 147 GHAWYVFG--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
G+AW + + ++ +A++G + L +QR+ G PD + VL
Sbjct: 105 GYAWRALACCTGAPASSAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVL 164
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
C + L+ G++VH V++ G+ + V L+ MY KCG++ AR +FDG+ D I
Sbjct: 165 SACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTI 224
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
W +MI+GY G Y + L LF M ++ PD +T
Sbjct: 225 CWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT------------------------ 260
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
C +I S G + + R+ V+W +I+ Y S L +
Sbjct: 261 -----------CVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVF 309
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
Y+ M+ +G MP T AS+LSA A + D G ++H A++ GL + + + ++LI++Y
Sbjct: 310 GLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLY 369
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLV 503
K CI A +VF +KN++ W +I+ G N E + F+ M +L+ + T V
Sbjct: 370 VKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFV 429
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNER 562
S+L AC + +L G+++H ++ G+ D F+ NA+LDMY + G + A F+ +
Sbjct: 430 SVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK 489
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM 590
D +WN L+ G A + A ++M
Sbjct: 490 DSVSWNALIVGLAHNEEEGEAINMLKRM 517
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 250/515 (48%), Gaps = 42/515 (8%)
Query: 83 LDSMQELNICV----DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
LD+ Q + + D+ + ++ C + G +H V K+ SV +
Sbjct: 141 LDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVD 200
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G++ A +F + D W +I GY + G + +AL+L+ RM +G V V
Sbjct: 201 MYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQV- 259
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TC V +++ L +M G L AR + +
Sbjct: 260 -------TC------------------------VTIISTLASM----GRLGDARTLLKRI 284
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
++WNA+I+ Y ++G + L+ M++ + P T +S++SA+ + GR
Sbjct: 285 RMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGR 344
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +K G +V V + LI +Y+ G + +KVF K++V W ++ + +
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNE 404
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
L ++ ++ +Q M D+ T SVL AC L +LDLG ++H + ++ G+ + + +AN
Sbjct: 405 LQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVAN 464
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
++DMYSK ID A +F IP K+ +SW ++I+GL N EA+ ++M +
Sbjct: 465 AMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIAL 524
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ V+ + ++AC+ I A+ GK+IH+ +++ V + + ++L+D+Y + G ++ +
Sbjct: 525 DEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584
Query: 558 -NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + + N L+TG + + A E F++++
Sbjct: 585 AHVDASSIVPINALITGLVQNNREDEAIELFQQVL 619
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 231/459 (50%), Gaps = 5/459 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N E+ ++ M+ ++ D+ V+++ C D G +H + K
Sbjct: 394 NAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIK 453
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA L M+ K G + A +F + +D SWN LI G A EA+++
Sbjct: 454 NGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINM 513
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + G+ D +F + C + ++ GK++H I++ ++ V ++LI +Y
Sbjct: 514 LKRMKFY-GIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYS 572
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +R V + + NA+I+G +N + + LF + + P T +S
Sbjct: 573 KFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTS 632
Query: 304 VISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
++S +G++VH Y +K + D S+ L+ +YL E+ K+ + +
Sbjct: 633 ILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDH 692
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K++V WT IS Y + +++ + M + DE T SVL AC+ + L G ++
Sbjct: 693 KNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEI 752
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L +++G +SY + L+DMYSKC + + E+F ++ ++ N++ W S+I+G N
Sbjct: 753 HGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGY 812
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+ EAL+ F+KM + +KP+ VTL+ +L AC+ G + G
Sbjct: 813 ANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEG 851
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 216/450 (48%), Gaps = 7/450 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L N +A+ L M+ I +DE + + C + G +HS K
Sbjct: 495 NALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIK 554
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +G++ + ++ KFGD+ + V + + N LI G + DEA+ L
Sbjct: 555 YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIEL 614
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q++ G KP +TF +L C GK+VH + ++ D + +L+ +Y
Sbjct: 615 FQQVL-KDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIY 673
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+KC L A + + +P ++ + W A ISGY +NG ++ L++F MR V D T
Sbjct: 674 LKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATF 733
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV+ A + G+E+HG ++K GF + + L+ MY G+ ++F +++
Sbjct: 734 TSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKN 793
Query: 362 K-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ +++ W +MI + + ++A+ +Q M+ PD++T+ VL AC+ G + G+
Sbjct: 794 RQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLH 853
Query: 421 -LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
++ G++ + LID+ + + KA EV Q+P + + + W + + +++
Sbjct: 854 FFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMH 913
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSA 508
+ +K ++ ++P S + LS+
Sbjct: 914 KDEERGKVAAKK-LVEMEPQSSSTYVFLSS 942
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 271/538 (50%), Gaps = 11/538 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
S++ A L+S + +D A ++R C K +H + K S L + N
Sbjct: 29 SVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATN 88
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-V 193
L+ +VK G A +F +M +R+ S+ L GYA + + LY R+ G +
Sbjct: 89 ILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHEL 144
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P V+T L+ + + +H +++ GY+++ V ALI Y CG + AR
Sbjct: 145 NPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+G+ +D + W ++S Y ENG + L L MR P+ T + + AS +G
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ VHG ++K + D V L+++Y G+ + KVF+ M DVV W+ MI+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + ++AV+ + M +P+E T++S+L+ CA LG +LH L ++ G
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I ++N LID+Y+KC+ +D A+++F ++ KN +SW ++I+G +A FR+ +
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N + VT S L ACA + ++ G ++H A++ A + N+L+DMY +CG +K
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + FN E DV++WN L++GY+ G G A M D K N +G+ C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 218/413 (52%), Gaps = 2/413 (0%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+LHS + K + +G A ++ + G + A VF + +D+ W ++ Y + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+F+++L L M + G P+ YTF L+ G+ K VH +++ Y D V
Sbjct: 227 YFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
L+ +Y + GD+ A VF+ MPK D + W+ MI+ + +NG + + LFI MRE V
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ TLSS+++ + LG ++HG V+K+GF D+ V N LI +Y + K+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F+ + SK+ VSW T+I YE KA ++ E+T +S L ACA L ++
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
DLG+++H LA++T + ++N+LIDMY+KC I A VF+++ +V SW ++I G
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+ +AL M + KPN +T + +LS C+ G + G+E +R
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 202/416 (48%), Gaps = 10/416 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E +LK L M+ + ++ +D +H + KT L R+
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G L ++ + GD+ A+ VF +M D+ W+ +I + + GF +EA+ L+ RM
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAF 343
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +T +L C G+++H V++ G++ D+ V NALI +Y KC + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---VDPDFMTLSSVISASE 309
+F + ++ +SWN +I GY GE K F M RE L V +T SS + A
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKA---FSMFREALRNQVSVTEVTFSSALGACA 460
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ LG +VHG IK + V+V N LI MY G+ + + VF+ ME+ DV SW
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y L +A+ +M+ P+ +T VLS C+ G +D G + + +R
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 430 LISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-LGLRLNNRSF 482
I + T ++ + + +DKA+++ IP + +V+ W +++ + NN F
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
C NG +A+ M+E + +E L +++ C + G LH +V K L
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA + ++ K + A +F ++ ++ SWN +I GY G +A S+++
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V TF L C + + G +VH I+ V V N+LI MY KCGD+
Sbjct: 443 -NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ VF+ M D SWNA+ISGY +G + L + +M++ P+ +T V+S
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 310 LVGDEKLGREVHGYVIK 326
G G+E +I+
Sbjct: 562 NAGLIDQGQECFESMIR 578
>gi|449499688|ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Cucumis sativus]
Length = 489
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 226/385 (58%), Gaps = 10/385 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
+L+ L L++ + + +D + +L+ LC + G+ +H ++ + +V + +
Sbjct: 34 ALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISS 93
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDL--FSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
L ++ FG + A VF +M +R+ F+WN LI GYA+ G +++AL+LY +M G
Sbjct: 94 KLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQM-EEEG 152
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+PD +TFP VL+ CGG+ ++ G+ VH HV+R G+ DV V+NAL+ MY KCG +VRAR
Sbjct: 153 VEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRAR 212
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D +SWN+M++GY +G + + L +F M + +PD + LS+++S +
Sbjct: 213 KVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSN---IS 269
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K +HG+VI+ G ++S+ N LI MY G + +F +M KD+VSW ++IS
Sbjct: 270 SMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIIS 329
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-RTGLI 431
+ S +A+ +++ME+ G PD +T S+LS CA LG + G +L+ L + G+
Sbjct: 330 AHFNSA---EALTYFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGXELYFLMKGKYGIR 386
Query: 432 SYIIIANTLIDMYSKCKCIDKALEV 456
I ++++Y + I++A ++
Sbjct: 387 PTIEHYACMVNLYGRAGMIEEAYKI 411
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 156/287 (54%), Gaps = 9/287 (3%)
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ +DP+ SS++ + G +H + +V + + L+++Y SFG E+
Sbjct: 50 LFIDPEI--FSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMED 107
Query: 352 GEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+VF M +++ +W ++IS Y L + A+ Y ME EG PD T VL AC
Sbjct: 108 AHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKAC 167
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+G++ +G +H+ +R+G + + N L+DMYSKC CI +A +VF QI K+++SW
Sbjct: 168 GGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWN 227
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S++ G + FEAL F +M+ +P+SV L ++LS I ++ IH +R
Sbjct: 228 SMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS---NISSMKFKLHIHGWVIRH 284
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPA-WNQFNSNERDVSAWNILLTGY 574
GV ++ + N+L+ MY +CG++ A W ++D+ +WN +++ +
Sbjct: 285 GVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAH 331
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G D +S+L C L + GI++H+L L + I++ L+ +Y+ ++ A
Sbjct: 49 GLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDA 108
Query: 454 LEVFHQIPDKN--VISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACA 510
+VF ++ ++N +W S+I G +AL ++F+ ++P++ T +L AC
Sbjct: 109 HQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACG 168
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
IG++ G+ +H H +R G A D F+ NAL+DMY +CG + A F+ E +D+ +WN
Sbjct: 169 GIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNS 228
Query: 570 LLTGYAERGQGALAEEFFRKMI 591
+LTGY G A + F +MI
Sbjct: 229 MLTGYTRHGLHFEALDIFDQMI 250
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 271/546 (49%), Gaps = 25/546 (4%)
Query: 66 RLNELCLNGSLEQALKYL------DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
R++ C G L+++ + + D + +AL L++ ++ + G +H
Sbjct: 49 RISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ 108
Query: 120 VVSKTMSHLSVRLGN------AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+VS S RL N ++M+ G + +VF + ++LF WN +I Y++
Sbjct: 109 LVSG-----STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+DE L + M + PD +T+PCV++ C G+ D+ G VH V++ G DV
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL++ Y G + A +FD MP+R+ +SWN+MI + +NG + +L M E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 294 VD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
D PD TL +V+ + LG+ VHG+ +K+ ++ + N L+ MY G
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLS 407
+ +F +K+VVSW TM+ + + + M A G DE+TI + +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
C L +LH +++ + ++AN + Y+KC + A VFH I K V S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I G +N +L +M ++ L P+S T+ S+LSAC+++ +L GKE+H +
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
R + D F+ ++L +Y+ CG + F++ E + + +WN ++TGY + G A
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 586 FFRKMI 591
FR+M+
Sbjct: 584 VFRQMV 589
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 258/520 (49%), Gaps = 15/520 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C GL +H +V KT V +GNA +S + G + A +F M +R+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGK 217
L SWN +I ++ GF +E+ L M G PDV T VL C ++ GK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH ++ + ++ + NAL+ MY KCG + A+++F ++ +SWN M+ G+ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 278 EYMKGLMLFIMMREVL-----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ F ++R++L V D +T+ + + +E+H Y +K F +
Sbjct: 373 DTHG---TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N + Y G+ ++VF + SK V SW +I + S P +++ + M+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G +PD T+ S+LSAC+ L +L LG ++H +R L + + +++ +Y C +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
+F + DK+++SW ++I G N AL FR+M+L ++ ++++ + AC+
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 609
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ +L G+E HA+AL+ + D F+ +L+DMY + G + + FN E+ ++WN +
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 571 LTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKCQ 608
+ GY G A + F +M + N L +G+ C
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 256/523 (48%), Gaps = 18/523 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN----ICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
NS + NG E++ L M E N D LV ++ +C +R G +H
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 316
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
K + L NA + M+ K G + +A +F ++++ SWN ++GG++ G
Sbjct: 317 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 180 ALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+ ++M G VK D T + C L KE+H + ++ + + V NA
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y KCG L A+ VF G+ + SWNA+I G+ ++ + L + M+ + PD
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T+ S++SA + +LG+EVHG++I+ D+ V ++ +Y+ G + +F
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
ME K +VSW T+I+ Y + PD+A+ ++ M G I++ V AC+ L +L LG
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ H A++ L IA +LIDMY+K I ++ +VF+ + +K+ SW ++I+G ++
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ EA+ F +M P+ +T + +L+AC G + G + ++ +F G P
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR---YLDQMKSSF-GLKP 732
Query: 538 N-----ALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILLT 572
N ++DM R G++ A + S E DV W LL+
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 919
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 272/548 (49%), Gaps = 45/548 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + NG +L Y SM D ++ C G LH +V K
Sbjct: 248 NTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIK 307
Query: 124 T----MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ +H+SV N+ +SM+ K GD+ A VF ++ +D+ SWN ++ G + G F+E
Sbjct: 308 SGYSPEAHVSV--ANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEE 365
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNAL 238
A + + M V ++PD+ T + CG + G+ +H + +R ++ ++V+N++
Sbjct: 366 AFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSV 425
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-- 296
I MY KCG +A +F RD +SWN+MIS + +NG + LF REV+ +
Sbjct: 426 IDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLF---REVVSEYTC 482
Query: 297 ---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
T+ +++++ + G+ VH ++ K+G D++ L++M
Sbjct: 483 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG---DLTSAFLLLEMIF--------- 530
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACL 412
E++D+ SW ++I S +++ +Q M EG + D IT+ +SA
Sbjct: 531 ------ETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISAS--- 581
Query: 413 GNLDLGIK---LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
GNL L ++ LH LA+++ + NTLI MY +CK + A++VF I D N+ SW
Sbjct: 582 GNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWN 641
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I L N E FR L L+PN +T V +LSA ++G+ G + H H +R G
Sbjct: 642 CVISALSQNKAGREVFQLFRN--LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRG 699
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ F+ AL+DMY CG ++ F NS + +SAWN +++ Y G G A E F+
Sbjct: 700 FQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMGEKAMELFK 759
Query: 589 KMIDSKGN 596
+M S GN
Sbjct: 760 EM--SSGN 765
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 212/401 (52%), Gaps = 10/401 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H ++ G+ D+ + L+T+Y + GDLV + +F + ++D I WN+MI+ +N
Sbjct: 97 RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQN 156
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G Y+ + LF+ M + D TL +SA + K VH I+ G D S+C
Sbjct: 157 GRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLC 216
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ +Y + E VF+ ME +D+VSW T+++ + P ++ ++ M G
Sbjct: 217 NALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQE 276
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTLIDMYSKCKCIDKAL 454
D +T + V+SAC+CL L LG LH L +++G +++ +AN++I MYSKC I+ A
Sbjct: 277 ADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAE 336
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARI 512
VF ++ K+VISW +I+ GL N EA ++M ++P+ T+VSI S C
Sbjct: 337 TVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDF 396
Query: 513 GALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNIL 570
G+ IH + +R + + N+++DMY +CG A F + RD+ +WN +
Sbjct: 397 CLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSM 456
Query: 571 LTGYAERGQGALAEEFFRKMID----SKGNWRKLMGLFRKC 607
++ +A+ G A+ FR+++ SK + ++ + C
Sbjct: 457 ISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSC 497
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 231/471 (49%), Gaps = 34/471 (7%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NA ++++ K DL A VF M RD+ SWN ++ G+ +L ++ M
Sbjct: 215 LCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIG-S 273
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLV 249
G + D TF CV+ C + +L G+ +H VI+ GY EA V V N++I+MY KCGD+
Sbjct: 274 GQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIE 333
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISAS 308
A VF+ + +D ISWNA+++G NG + + + M+ V + PD +S+V+S +
Sbjct: 334 AAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPD---ISTVVSIT 390
Query: 309 ELVGD---EKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ GD + GR +HGY ++ S + V N +I MY G + E +F +D+
Sbjct: 391 SICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDL 450
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAE--GSMPDEITIASVLSACACLGNLDLGIKLH 422
VSW +MIS + + +A ++ + +E S T+ ++L++C +L G +H
Sbjct: 451 VSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVH 510
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ G D+ S ++ E +++ SW S+I G +
Sbjct: 511 CWLQKLG------------DLTSAFLLLEMIFET------RDLTSWNSVIYGCASSGHHL 552
Query: 483 EALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
E+L F+ M ++ + +TL+ +SA + ++ G+ +H A++ D L N L
Sbjct: 553 ESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTL 612
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ MY RC + A F ++ ++ +WN +++ ++ G + FR +
Sbjct: 613 ITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 663
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 223/464 (48%), Gaps = 29/464 (6%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+++ + GDL + +FG++ ++D+ WN +I + G + A+ L+ M G +
Sbjct: 118 LLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGN-EF 176
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T + + K+ VH I G +D + NAL+ +Y K DL A VF
Sbjct: 177 DSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVF 236
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M RD +SWN +++ NG L+ F M + D +T S VISA + +
Sbjct: 237 THMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELP 296
Query: 316 LGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG +HG VIK G+S + VSV N +I MY G+ E E VF + KDV+SW +++
Sbjct: 297 LGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNG 356
Query: 374 YEGSVLPDKAVETYQMMEA-EGSMPDEITIASVLSACA--CLGNLDLGIKLHQLAMRTGL 430
+ + ++A + M++ + PD T+ S+ S C CL G +H +R +
Sbjct: 357 LSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSR--EGRAIHGYTVRREM 414
Query: 431 ISYII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
S + + N++IDMY KC +A +F ++++SW S+I N + EA FR
Sbjct: 415 QSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFR 474
Query: 490 KMMLNL---KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+++ K + T+++IL++C +L+ GK +H ++G FL LL+M
Sbjct: 475 EVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL---LLEMIFE 531
Query: 547 CGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
RD+++WN ++ G A G + F+ M
Sbjct: 532 --------------TRDLTSWNSVIYGCASSGHHLESLRAFQAM 561
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 247/535 (46%), Gaps = 37/535 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHS-VV 121
N+ LN L NG E+A L MQ ++ I D +V++ +C EG +H V
Sbjct: 351 NAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTV 410
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ M ++ + N+ + M+ K G A ++F RDL SWN +I +A+ GF EA
Sbjct: 411 RREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAK 470
Query: 182 SLYQRMFW-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+L++ + K + T +L +C L GK VH + + G D+ +A +
Sbjct: 471 NLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLL 525
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
+ ++F+ RD SWN++I G +G +++ L F M RE + D +
Sbjct: 526 L----------EMIFE---TRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLI 572
Query: 300 TLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
TL ISAS G+ +L GR +HG IK D + N LI MY + E KVF
Sbjct: 573 TLLGTISAS---GNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVF 629
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++ SW +IS + + + ++ ++ E P+EIT +LSA LG+
Sbjct: 630 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTS 686
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G++ H +R G + ++ L+DMYS C ++ ++VF K++ +W S+I
Sbjct: 687 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYG 746
Query: 477 LNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAF 532
+ +A+ F++M ++PN T +S+LSAC+ G + G + + + GV
Sbjct: 747 FHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKP 806
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAERGQGALAEE 585
++DM R G++K A+ + W LL+ G L E
Sbjct: 807 VTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQKAGVWGALLSACNYHGDTKLGTE 861
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 161/332 (48%), Gaps = 38/332 (11%)
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+FD MPKRD + V+ FM L V+ + + +
Sbjct: 61 LFDEMPKRDNRT----------------------------VEASFMFLRDVLRSFMMRIE 92
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ R +H + +K GF D++ + L+ +Y G+ +F ++ KDV+ W +MI+C
Sbjct: 93 TETPRSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITC 152
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK---LHQLAMRTGL 430
+ AV + M +G+ D T+ L A + L +L L K +H LA+ TGL
Sbjct: 153 LNQNGRYIAAVGLFVEMIHKGNEFDSTTL---LLAVSALSSLHLSKKCPMVHCLAIETGL 209
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+S + N L+++Y+K + + A VF + ++++SW +I+ N +LI+F+
Sbjct: 210 VSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKS 269
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRC 547
M+ + ++VT ++SAC+ + L G+ +H ++ G + + + N+++ MY +C
Sbjct: 270 MIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKC 329
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
G ++ A F +DV +WN +L G + G
Sbjct: 330 GDIEAAETVFEELLCKDVISWNAILNGLSANG 361
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 271/556 (48%), Gaps = 11/556 (1%)
Query: 27 ETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCL-----NGSLEQALK 81
+ S+ RH + S L + ++S +N ++ L L G L Q +
Sbjct: 7 QCSWLLSNDARHANFAQIPSWVSLKSTHSSFRTHQNQQGQVENLHLISLAKQGKLRQVHE 66
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
++ +M I ++ + L ++C +G H+ + + M++ + + N L M+
Sbjct: 67 FIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR-MANSNKFIDNCILQMYC 125
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
A F K+ DRDL SW +I Y + G DEA+ L+ RM +G + P+ F
Sbjct: 126 DCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLG-IIPNFSIFS 184
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
++ + L GK++H +IR + AD+ + + MYVKCG L A + + M ++
Sbjct: 185 TLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRK 244
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
++ ++ GY + L+LF M V+ D S ++ A +GD G+++H
Sbjct: 245 SAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIH 304
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
Y IK+G +VSV PL+ Y+ E + F + + SW+ +I+ Y S D
Sbjct: 305 SYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFD 364
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+E ++ + ++G + + ++ AC+ + +L G ++H A++ GL++Y+ + +I
Sbjct: 365 RALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMI 424
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
MYSKC +D A + F I + ++WT+II + ++ EAL F++M ++PN V
Sbjct: 425 TMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVV 484
Query: 501 TLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
T + +L+AC+ G + GK+ + + + GV N ++D+Y R G + A S
Sbjct: 485 TFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRS 544
Query: 560 N--ERDVSAWNILLTG 573
E DV +W LL G
Sbjct: 545 MPFEPDVMSWKSLLGG 560
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 200/405 (49%), Gaps = 5/405 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D G +HS + + + + +M+VK G L A KM + + L+ GY
Sbjct: 197 DLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGY 256
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+A +AL L+ +M GV+ D + F +L+ C + DL GK++H + I+ G E++
Sbjct: 257 TQAARNRDALLLFSKMI-SEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE 315
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V V L+ YVKC AR F+ + + + SW+A+I+GY ++G++ + L +F +R
Sbjct: 316 VSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRS 375
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V + +++ A V D G ++H IK G +S + +I MY G +
Sbjct: 376 KGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDY 435
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+ F ++ D V+WT +I + +A+ ++ M+ G P+ +T +L+AC+
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSH 495
Query: 412 LGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
G + G + L + + G+ I N +ID+YS+ + +ALEV +P + +V+SW
Sbjct: 496 SGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWK 555
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIG 513
S +LG + R+ E + + L P +S T V + + A G
Sbjct: 556 S-LLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAG 599
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ H + +M S+ + N +++MY + E+ F ++ +D+ SW T+IS Y
Sbjct: 99 GKLFHNRLQRMANSNKF-IDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTE 157
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+AV + M G +P+ ++++ + A LDLG ++H +R + I I
Sbjct: 158 EGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISI 217
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ +MY KC +D A +++ K+ ++ T +++G R+ +AL+ F KM+ +
Sbjct: 218 ETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGV 277
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ + IL ACA +G L GK+IH++ +++G+ + + L+D YV+C R + A
Sbjct: 278 ELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQ 337
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F S +E + +W+ L+ GY + G+ A E F K I SKG
Sbjct: 338 AFESIHEPNDFSWSALIAGYCQSGKFDRALEVF-KTIRSKG 377
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
I G+ +N RS+E L KM C +GAL GK H R+ +
Sbjct: 73 IAGISINPRSYEYLF---KM-----------------CGTLGALSDGKLFHNRLQRMANS 112
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ N +L MY C A F+ +RD+S+W +++ Y E G+ A F +M
Sbjct: 113 -NKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRM 171
Query: 591 ID 592
+D
Sbjct: 172 LD 173
>gi|255545590|ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546941|gb|EEF48438.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 243/447 (54%), Gaps = 4/447 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +S++ + G+L A VF +M +R + SW +I GY G DEAL L+ + GV
Sbjct: 5 NNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELI-ENGV 63
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ TF C+L C D + G+++H V++ G ++ V +A+++ Y +CGDL A
Sbjct: 64 TANNRTFVCILNVCSKRLDFELGRQIHACVVK-GNWRNLIVDSAIVSFYAQCGDLESAFC 122
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F + ++D + W ++IS + G + +F M P+ T+ +++ A
Sbjct: 123 AFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKA 182
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K GR++H ++K + DDV + L+ MY G + ++VF M ++ V+WT++I+
Sbjct: 183 LKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAG 242
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y L ++A+ +++M+ + + +T+ SVL AC + G ++H +++G+ S
Sbjct: 243 YARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSN 302
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + +TL+ Y KC + A +V Q+ +NV+SWT++I G FEAL F ++MM
Sbjct: 303 VYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMD 362
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
++PN T S L ACA + +++ GK IH+ A + + + ++ +AL+ MY +CG +
Sbjct: 363 EGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSD 422
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERG 578
A F+S ER++ +W ++ YA G
Sbjct: 423 AIQVFDSMPERNLISWKTMILSYARNG 449
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 238/437 (54%), Gaps = 3/437 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL+ + E + + V ++ +C + ++ G +H+ V K + ++ + +A
Sbjct: 49 DEALRLFSELIENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKG-NWRNLIVDSAI 107
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+S + + GDL A+ F ++ ++D+ W +I ++ G +EA ++ +M G + P+
Sbjct: 108 VSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFL-PN 166
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+T +L+ CG LK G+++H +++ Y+ DV + +L+ MY KCG+++ ++ VFD
Sbjct: 167 EFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFD 226
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
GM KR+ ++W ++I+GY G + + LF +M+ + + +T+ SV+ A +
Sbjct: 227 GMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLT 286
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GREVH +IK G +V + + L+ Y G KV +M ++VVSWT MIS Y G
Sbjct: 287 GREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIG 346
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+E + M EG P+E T +S L ACA L ++ G +H A +T S + +
Sbjct: 347 LGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYV 406
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNL 495
+ LI MYSKC + A++VF +P++N+ISW ++IL N EAL + +R +
Sbjct: 407 GSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGI 466
Query: 496 KPNSVTLVSILSACARI 512
+ + S++ +C +
Sbjct: 467 EVDDYIYASVMGSCGDV 483
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 191/361 (52%), Gaps = 3/361 (0%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N LI++Y + G+L+ AR VFD M +R +SW AMI+GY G + L LF + E
Sbjct: 3 VDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENG 62
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V + T +++ D +LGR++H V+K G ++ V + ++ Y G+ E
Sbjct: 63 VTANNRTFVCILNVCSKRLDFELGRQIHACVVK-GNWRNLIVDSAIVSFYAQCGDLESAF 121
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
F ++ KDVV WT++IS ++A + M EG +P+E T+ ++L AC
Sbjct: 122 CAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKK 181
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L G +LH ++ + I +L+DMY+KC + + EVF + +N ++WTSII
Sbjct: 182 ALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIA 241
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G EA+ FR M + N++T+VS+L AC I A + G+E+HA ++ G+
Sbjct: 242 GYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQS 301
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ +L + L+ Y +CG A + R+V +W +++GY G A EF ++M+
Sbjct: 302 NVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMM 361
Query: 592 D 592
D
Sbjct: 362 D 362
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 169/344 (49%), Gaps = 4/344 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G E+A + M +E + +++ C K+ G LH + K M V +
Sbjct: 145 QGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFI 204
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + M+ K G++ + VF M R+ +W +I GYA+ G +EA+ L+ R+
Sbjct: 205 GTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLF-RVMKRRK 263
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ + T VLR CG + G+EVH +I+ G +++V + + L+ Y KCG+ A
Sbjct: 264 IISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIAS 323
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
V M R+ +SW AMISGY G + L M + V+P+ T SS + A +
Sbjct: 324 KVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLE 383
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+ +H + K S +V V + LI MY G + +VF M ++++SW TMI
Sbjct: 384 SVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMIL 443
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
Y + L +A++ M+AEG D+ ASV+ +C G++D
Sbjct: 444 SYARNGLCREALKLMYRMQAEGIEVDDYIYASVMGSC---GDVD 484
>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 873
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 278/580 (47%), Gaps = 41/580 (7%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
+S + LCLN ++ L ++ Q D + + C + G L
Sbjct: 10 SSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKALQGYA 69
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EA 180
K + L+++ + G W +F ++ RD+ +WN+++ GY ++ D +A
Sbjct: 70 VKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKA 129
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
+ L+ +M G VKP T +L C V GK +H V++ G + D V NALI+
Sbjct: 130 IRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALIS 189
Query: 241 MYVKCGD-LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY K G A F+ + +D ++WN +IS E L LF +M E ++P+++
Sbjct: 190 MYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYI 249
Query: 300 TLSSVISASELVGDE---KLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
T++ ++ G+ + G+E+HGY+ + +D+SVCN L+ +YL G EE E +
Sbjct: 250 TIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEIL 309
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACL 412
FS ++ +D+VSW T+IS Y L DK AV+ + + GS PD +T+ SVL ACA
Sbjct: 310 FSHLKQRDLVSWNTLISGYS---LNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYS 366
Query: 413 GNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
NL +G +H +R ++S + N L+ Y+KC + A F I K++ISW S+
Sbjct: 367 QNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSV 426
Query: 472 ILGLRL--NNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+ N F L+ +ML KP+ T++SI++ C + KE+H +++R
Sbjct: 427 LNAFAEFGNTTQFPRLL---HLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVR 483
Query: 528 IGVAFDGFLP---NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGAL 582
+ + P NALLD Y +CG + A F S+ +R++ N +++ Y
Sbjct: 484 ACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPND 543
Query: 583 AEEFFRKMIDSK-GNW-------------RKLMGLFRKCQ 608
A F M ++ W R +GLFR+ Q
Sbjct: 544 ALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 260/523 (49%), Gaps = 45/523 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGH-AWYVFGKMCDRDLFSWNVLIGGYA 172
G +HS V K+ +GNA +SM+ K G + A+ F + +D+ +WN +I A
Sbjct: 165 GKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALA 224
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIR-FGY 228
+ +AL L+ M ++P+ T C+L C G + GKE+H ++ R
Sbjct: 225 EKNLMFDALQLFSLML-EEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTEL 283
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
D+ V NAL+ +Y++ G + A ++F + +RD +SWN +ISGY N ++++ + F
Sbjct: 284 IEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCK 343
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFG 347
+ + DPD +TL SV+ A + ++G+ +HGY+++ S+D +V N L+ Y
Sbjct: 344 LLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCN 403
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ + FS + SKD++SW ++++ + + +M E PD TI S+++
Sbjct: 404 DVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIIN 463
Query: 408 AC------------------ACLGNLDLGIKLHQLAM----RTGLISY------------ 433
C ACL D G + + + G+I Y
Sbjct: 464 FCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKR 523
Query: 434 -IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ N++I Y CK + AL +F + + ++ +W +I NN +AL FR++
Sbjct: 524 NLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ +KP++V+++S+L C + + KE H ++ R D +L ALLD Y +CG +
Sbjct: 584 IKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRFE-DVYLDGALLDAYAKCGAVD 642
Query: 552 PAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A+ F +S+++D+ + +++GYA G G A + F M++S
Sbjct: 643 CAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLES 685
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 226/435 (51%), Gaps = 11/435 (2%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLK 214
M D SW+ I E LS++ F G KPD + F + ++C + +
Sbjct: 1 MLPLDFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAIN 60
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
GK + + ++ G A V L+ +Y +CG +F+ + RD ++WN ++SGY
Sbjct: 61 IGKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYC 120
Query: 275 ENGEY-MKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ + K + LF+ M E V P +T++S++ VG +G+ +H +V+K G D
Sbjct: 121 RSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRD 180
Query: 333 VSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V N LI MY G + F+ + KDVV+W T+IS L A++ + +M
Sbjct: 181 TLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLML 240
Query: 392 AEGSMPDEITIASVLSACACLGN---LDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKC 447
E P+ ITIA +L CA GN G ++H + RT LI I + N L+++Y +
Sbjct: 241 EEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRV 300
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSIL 506
+++A +F + ++++SW ++I G LN++ EA+ F K++ L P+SVTL+S+L
Sbjct: 301 GQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVL 360
Query: 507 SACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDV 564
ACA L GK IH + LR V + D + NAL+ Y +C +K A++ F+ + +D+
Sbjct: 361 PACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDL 420
Query: 565 SAWNILLTGYAERGQ 579
+WN +L +AE G
Sbjct: 421 ISWNSVLNAFAEFGN 435
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 248/522 (47%), Gaps = 52/522 (9%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA ++++++ G + A +F + RDL SWN LI GY+ + EA+ + ++
Sbjct: 287 ISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLC 346
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
+G PD T VL C +L+ GK +H +++R D V NAL++ Y KC D+
Sbjct: 347 LGS-DPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDV 405
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVIS- 306
A F + +D ISWN++++ + E G + +L +M+RE PD T+ S+I+
Sbjct: 406 KSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERF-KPDHFTILSIINF 464
Query: 307 ASELVGDEKLGREVHGYVI----------------------KMGFSD------------- 331
++G K+ +EVH Y + K G D
Sbjct: 465 CITVLGGCKV-KEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKR 523
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
++ CN +I Y++ + + +FS M D+ +W MI Y + P A+ ++ ++
Sbjct: 524 NLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G PD ++I S+L C L + L + H + R+ + + L+D Y+KC +D
Sbjct: 584 IKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF-EDVYLDGALLDAYAKCGAVD 642
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
A ++F K+++ +TS+I G ++ EAL F M+ + +KP+ V + SILSAC+
Sbjct: 643 CAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACS 702
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSA 566
G + G I H++ + + + ++D+ R GR+K A++ + D +
Sbjct: 703 HTGLVDQGLNIF-HSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANI 761
Query: 567 WNILLTGYAERGQGAL----AEEFFRKMIDSKGNWRKLMGLF 604
W LL + L AE+ F D GN+ + L+
Sbjct: 762 WGTLLGACKTHHEVELGLVVAEQLFETKADDIGNYVVMSNLY 803
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V L A L + K G + A+ +F +DL + +I GYA G +EAL ++ M
Sbjct: 625 VYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNML- 683
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDL 248
GVKPD +L C + +G + H + ++ ++ + + G +
Sbjct: 684 ESGVKPDHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRI 743
Query: 249 VRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP--DFMTLSSVI 305
A GMP + D W ++ + E GL++ + E D +++ +S++
Sbjct: 744 KDAYSFVIGMPIQPDANIWGTLLGACKTHHEVELGLVVAEQLFETKADDIGNYVVMSNLY 803
Query: 306 SA 307
+A
Sbjct: 804 AA 805
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 279/543 (51%), Gaps = 35/543 (6%)
Query: 60 TKNPNSRLNELCL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+ NP RL+ L + S+ + LK L +Q+++
Sbjct: 13 SSNPTQRLSPLAQPHASILRKLKDLKPLQQIHA--------------------------- 45
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+++ ++H + L N+ ++ +V G L A +F +++ SW +LI G AK F
Sbjct: 46 QIITSGLTH-NTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFV 104
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EA+ +++ M +G KP+ T VL + ++ K VH +R G+E +V V AL
Sbjct: 105 EAIDVFREMI-MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETAL 163
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY K G + AR +F+ M +R+ ++WNA++SGY ++G + + LF +MR + DF
Sbjct: 164 VDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDF 223
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T+ S+I AS VG ++G +HG++I+ G+ +D + L+ +Y+S ++ +VFS
Sbjct: 224 YTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSE 283
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDL 417
M KDV +WT M++ + D+A++ + +M+ + D I + +LS+C+ G L
Sbjct: 284 MSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQ 343
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H LA++T + I + + +IDMY+ C ++ A F+ + +K+V+ W ++I G +
Sbjct: 344 GRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGM 403
Query: 478 NNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N +A+ F +M L P+ T VS+L AC+ G + G +I H ++
Sbjct: 404 NGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQ 463
Query: 537 PNA-LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
A ++D+ R G++ A++ N+ + D ++ LL G L E +K+ +
Sbjct: 464 HYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEM 523
Query: 594 KGN 596
+ N
Sbjct: 524 EPN 526
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 238/457 (52%), Gaps = 28/457 (6%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G A + MF K GDL VF + +R + W +LI YA++G+ DEA+ L+ M
Sbjct: 189 VSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLE 248
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD-- 247
G +PD YT +L C + + G+++H +R G E+D V L+ MY K +
Sbjct: 249 -NGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307
Query: 248 -LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM-LFIMMREVLVDPDFMTLSSVI 305
L AR VF+ MPK + ++W A++SGY + G +M LF M + P+ +T SS++
Sbjct: 308 SLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSML 367
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A +GD+ GR++H + +K +D V N L+ MY G+ EE F ++ K++V
Sbjct: 368 KACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMV 427
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMP---DEITIASVLSACACLGNLDLGIKLH 422
S + G++ D TYQ + E M T S++SA A +G L G +LH
Sbjct: 428 S-------FSGNLDGDGRSNTYQDYQIE-RMELGISTFTFGSLISAAASVGMLTKGQRLH 479
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
L+++ G S I N+L+ MYS+C + A +VF ++ D NVISWTS+I GL + +
Sbjct: 480 ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAA 539
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--- 538
AL F M+ +KPN VT +++LSAC+ G + GKE R+ G +P
Sbjct: 540 RALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE----HFRMMQKHHGLIPRMEH 595
Query: 539 --ALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILL 571
++D+ R G ++ A + N V A W LL
Sbjct: 596 YACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLL 632
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 242/469 (51%), Gaps = 14/469 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N+ L+++ K + A VF M RDL SW + ++ G EAL L+
Sbjct: 86 VANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLE 145
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLK-RGKEVHVHVIRFGY-EADVDVVNALITMYVKCGD 247
G+ P+ +T + C G V V + G+ DV V ALI M+ K GD
Sbjct: 146 -EGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGD 204
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
LV R VFDG+ +R + W +I+ Y ++G + + LF+ M E PD TLSS++SA
Sbjct: 205 LVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSA 264
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE---GEKVFSRMESKDV 364
+G +LG+++H +++G D V L+ MY N + +VF+RM +V
Sbjct: 265 CTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNV 324
Query: 365 VSWTTMISCYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
++WT ++S Y D V + M EG P+ IT +S+L ACA LG+ D G ++H
Sbjct: 325 MAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHT 384
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+++ L ++ N L+ MY++ I++A F Q+ +KN++S++ + G +N +
Sbjct: 385 HCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD 444
Query: 484 ALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
++ + L ++ T S++SA A +G L G+ +HA +L+ G D + N+L+ M
Sbjct: 445 ----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSM 500
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
Y RCG + A F+ N+ +V +W +++G A+ G A A E F MI
Sbjct: 501 YSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMI 549
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 201/360 (55%), Gaps = 15/360 (4%)
Query: 212 DLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPK--RDRISWN 267
D+ G+ + H++R G E D V N+L+T+Y KC + AR VFDGMP RD +SW
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYV 324
AM S NG + L LF E + P+ TL + A SEL G V G V
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELF--HLAGGAVLGLV 179
Query: 325 IKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
K+GF DVSV LI M+ G+ +VF + + VV WT +I+ Y S D+A
Sbjct: 180 FKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
VE + M G PD+ T++S+LSAC LG+ LG +LH LA+R GL S ++ L+DM
Sbjct: 240 VELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDM 299
Query: 444 YSKC---KCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMM-LNLKPN 498
Y+K + + A EVF+++P NV++WT+++ G ++ ++ + +I F KM+ ++PN
Sbjct: 300 YAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPN 359
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
+T S+L ACA +G G++IH H ++ +A + NAL+ MY G ++ A + F+
Sbjct: 360 HITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFD 419
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 186/395 (47%), Gaps = 43/395 (10%)
Query: 100 NLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
++++ C D G +H+ V ++ L+V +GNA +SM+ + G + A + F ++ +
Sbjct: 365 SMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQLYE 423
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++ S++ + G ++ + + YQ G+ +TF ++ V L +G+
Sbjct: 424 KNMVSFSGNLDGDGRSNTYQD----YQIERMELGIS--TFTFGSLISAAASVGMLTKGQR 477
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++ G+ +D + N+L++MY +CG LV A VFD M + ISW +MISG ++G
Sbjct: 478 LHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGY 537
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE-------VHGYVIKMGFSD 331
+ L LF M V P+ +T +V+SA G K G+E HG + +M
Sbjct: 538 AARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRM---- 593
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMI-SCYEGSVLPDKAVETYQM 389
+ C ++ + G E+ + M + D + W T++ +C + + + +
Sbjct: 594 EHYAC--MVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHV 651
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA-----MRTGLISYIIIANTLI--- 441
++ E P + S L A A G D ++ L M+ +S++ + NT+
Sbjct: 652 IQLEPQDPAPYVLLSNLYAEA--GLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFR 709
Query: 442 ----------DMYSKCKCIDKALEVFHQIPDKNVI 466
++Y+K + + + ++V +PD +V+
Sbjct: 710 AGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVV 744
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 414 NLDLGIKLHQLAMRTG--LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--KNVISWT 469
++ LG L +RTG L + ++AN+L+ +YSKC + A VF +P ++++SWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 470 SIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSAC-ARIGALMCGKEIHAHALR 527
++ L N EAL +F + L PN+ TL + AC A + G + +
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 528 IGV-AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
+G D + AL+DM+ + G + F+ ER V W +L+T YA+ G A E
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 586 FFRKMIDS 593
F M+++
Sbjct: 242 LFLDMLEN 249
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 228/420 (54%), Gaps = 2/420 (0%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
ED V+ ++ C G +H+ K S+ N L+ +VK G L + +F
Sbjct: 215 EDFYVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFD 274
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+M +R++ SW+ +I G+ + G +EALSL+ RM G + P+ +T L C L
Sbjct: 275 EMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLI 334
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+++ ++R GY ++V ++NA +T ++ L+ A VF+ +D +SWNAM++GY
Sbjct: 335 CSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYL 394
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ Y + + M V PD T +S+++ + + +LG +VHG ++K G+ +D+
Sbjct: 395 QLA-YFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDIC 453
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L MY+ +G K F M S DV SWT M + P KA+E M+ G
Sbjct: 454 VGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVG 513
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
++ T+A+ L++CA L +++ G K H L ++ G + + N L+DMY+KC C+ A
Sbjct: 514 VRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSAN 573
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
VF + +++V+SWT++I+G N ++ EAL F +M +PN +T + +L+AC++ G
Sbjct: 574 VVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGG 633
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 198/393 (50%), Gaps = 10/393 (2%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C D + G +H ++ + N ++ YVKCG L +FD MP+R+
Sbjct: 222 LQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNV 281
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW+A+I+G+ ++G + L LF M + + P+ TL S + A L +++
Sbjct: 282 VSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYA 341
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV---L 379
+++++G+ +V + N + + E +VF SKD VSW M++ Y L
Sbjct: 342 FIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFEL 401
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
P + ++ M E PD T AS+L+ A L LG+++H +++G + I + N+
Sbjct: 402 P----KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNS 457
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPN 498
L DMY K + + + F ++ +V SWT + G +AL + + + ++ N
Sbjct: 458 LCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLN 517
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
TL + L++CA + ++ GK+ H +++G D + NALLDMY +CG M A F
Sbjct: 518 KFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFR 577
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
S +ER V +W ++ G+A GQ A + F +M
Sbjct: 578 SMDERSVVSWTTMIMGFAHNGQTKEALQIFDEM 610
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 36/401 (8%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V L NAFL+ ++ L A VF +D SWN ++ GY + +F+ L + R
Sbjct: 351 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFE--LPKFWRRM 408
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ VKPD +TF +L + + + G +VH +++ GY D+ V N+L MYVK L
Sbjct: 409 NLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKL 468
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+ FD M D SW M +G + GE MK L + M+ V V + TL++ +++
Sbjct: 469 LDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSC 528
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + G++ HG IK+G DV V N L+ MY G VF M+ + VVSWT
Sbjct: 529 ANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWT 588
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMR 427
TMI + + +A++ + M + P+ IT VL+AC+ G +D K ++
Sbjct: 589 TMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSAD 648
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G+ ++++ + CI +A ++ Q+P
Sbjct: 649 HGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMP-------------------------- 682
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+P S+ ++L AC G + GK HAL +
Sbjct: 683 -------FQPGSLVWQTLLGACLVHGDIETGKRAAEHALNL 716
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S L C + G +H ++ L + N +++ Y KC + L++F ++P++
Sbjct: 220 SFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPER 279
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEI 521
NV+SW++II G + R EAL F +M + + PN TLVS L AC+ L+C +I
Sbjct: 280 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQI 339
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
+A +R+G + FL NA L +R ++ A F S +D +WN ++ GY +
Sbjct: 340 YAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYF 399
Query: 581 ALAEEFFRKM 590
L +F+R+M
Sbjct: 400 ELP-KFWRRM 408
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
VS L C G IHA L+ + F F N +L+ YV+CGR+ F+ E
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPE 278
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+V +W+ ++ G+ + G+ A F +M
Sbjct: 279 RNVVSWSAIIAGFVQHGRPNEALSLFGRM 307
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 226/436 (51%), Gaps = 5/436 (1%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ L+ WN+ I GFF ++L Y M G+ + +TFP +L+ C + + G
Sbjct: 16 KPLYLWNLTIRSSVNGGFFAQSLETYSFMRH-SGIHGNNFTFPLLLKACANLASIGDGTM 74
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H H+I G+E+DV V +L+ MY K +L +R VFD R ISWN+MI+ Y +
Sbjct: 75 LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVIS--ASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L LF M +P+ T S++S A G GR +HG + K DD V
Sbjct: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVE 194
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L++MY++FG + VF + K V+SWT M+ Y + K ET+ M +
Sbjct: 195 NSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVV 254
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D+ ++S+C LGNL LG LH L ++TGL I LI MYSKC + A V
Sbjct: 255 LDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAV 314
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGAL 515
F + +K++ SWTS+I G EAL +F N++PN L + +SACA +G+L
Sbjct: 315 FDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSL 374
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGY 574
+EI A + G+A D + +L+ +Y + G ++ A FNS RD++AW+ ++ GY
Sbjct: 375 SMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 434
Query: 575 AERGQGALAEEFFRKM 590
A G G F +M
Sbjct: 435 AVHGMGEKTMNLFHEM 450
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 253/544 (46%), Gaps = 25/544 (4%)
Query: 47 VQVLNTQNTSSIATKNP----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLV 102
+Q+ ++S++ TK P N + G Q+L+ M+ I + L+
Sbjct: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
+ C +G LH+ + V + + + M+ KF +L + VF + R +
Sbjct: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-----LKRGK 217
SWN +I Y+++ +EAL L++ M GG +P+ TF +L G D L +G+
Sbjct: 121 SWNSMIAAYSRSFRVNEALKLFREMLG-GGFEPNSSTFVSLL---SGFADPTHGSLFQGR 176
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H + +F D V N+L+ MYV G + A VF + ++ ISW M+ GY + G
Sbjct: 177 LLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAG 236
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
K F MR+ V D +IS+ +G+ LG +H ++K G + +
Sbjct: 237 AVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGC 296
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI MY G+ VF + K + SWT+MIS Y + P +A+ + M P
Sbjct: 297 LLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRP 356
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +A+ +SACA LG+L + ++ + GL S ++ +LI +Y K I+KA +VF
Sbjct: 357 NGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVF 416
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ + +++ +W+S++ G ++ + + F +M + +KP+ SIL AC+ G +
Sbjct: 417 NSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVE 476
Query: 517 CGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNS--NERDVSAWNI 569
G E H +++ G +P L+D+ R G ++ A N + AW
Sbjct: 477 DGLE-HFKNMQLDY---GIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAP 532
Query: 570 LLTG 573
L+
Sbjct: 533 FLSA 536
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+S E F R + N+ T +L ACA + ++ G +HAH + +G D F+ +
Sbjct: 36 QSLETYSFMRHS--GIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTS 93
Query: 540 LLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
L+DMY + ++ + F+ ++ R V +WN ++ Y+ + A + FR+M+
Sbjct: 94 LVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREML 146
>gi|449442080|ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
gi|449490224|ref|XP_004158542.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 279/560 (49%), Gaps = 18/560 (3%)
Query: 32 FKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP-------NSRLNELCLNGSLEQALKYLD 84
F+P + S++ S L T N +T P + L C G +Y D
Sbjct: 16 FQPTSTSLSTRRTCSKWNLTTFNRCKSSTSFPFNFVEDHSKALPVACATGKCTTTEEYAD 75
Query: 85 ----SMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMF 140
S Q ++ C+ + +R R + +H+ + + + + +GN LS +
Sbjct: 76 VESCSNQSVSGCLSPYLIGVWLRS---SRSVKKLRAVHAFILRNFTSFGIYVGNNLLSSY 132
Query: 141 VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTF 200
++ G L A VF +M R + +W +I GY +EAL+L+ GV + F
Sbjct: 133 LRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSV-KSGVLANGQMF 191
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
C+L C D + G+++H +++ G ++ V +A+I Y +C D+ A + F+ M +
Sbjct: 192 VCILNLCAKRLDFELGRQIHGVIVK-GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRR 250
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
RD + W +MI+ + G + + +F M P+ ++ SV+ A + K+GR++
Sbjct: 251 RDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQL 310
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG +IK +DV V L+ MY GN + +VF M +++ V+WT++I+ Y L
Sbjct: 311 HGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLG 370
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
++A+ +++M+ + + +TI S+L AC + G ++H ++ + I I +TL
Sbjct: 371 EEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTL 430
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ Y KC+ KA V +P ++V+SWT+II G EAL F + M+ ++PNS
Sbjct: 431 VWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNS 490
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
T S L ACA++ A++ GK IH+ A + + F+ +AL+ MY +CG + A F+S
Sbjct: 491 FTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDS 550
Query: 560 NE-RDVSAWNILLTGYAERG 578
R++ +W ++ YA G
Sbjct: 551 MPVRNLVSWKAMILCYARNG 570
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 224/437 (51%), Gaps = 3/437 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL + + + V ++ LC + ++ G +H V+ K + ++ + +A
Sbjct: 170 EEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKG-NRGNLIVDSAI 228
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + + D+ A+ F +M RD+ W +I ++ G EA+S++ M P+
Sbjct: 229 IYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNML-SDEFLPN 287
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++ VL+ CG +LK G+++H +I+ + DV V +L+ MY KCG+L +R VFD
Sbjct: 288 EFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFD 347
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
GM R+ ++W ++I+GY G + L LF +M+ + + +T+ S++ A +
Sbjct: 348 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 407
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GREVH ++K F ++ + + L+ Y N+ + V M +DVVSWT +IS
Sbjct: 408 GREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAH 467
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+E + M EG P+ T +S L ACA + + G +H A +T +S + +
Sbjct: 468 LGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFV 527
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNL 495
+ LI MY+KC + +A +VF +P +N++SW ++IL N EAL + +R
Sbjct: 528 GSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGF 587
Query: 496 KPNSVTLVSILSACARI 512
+ + L ++ AC +
Sbjct: 588 EVDDYILGTVYGACGDV 604
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 202/385 (52%), Gaps = 7/385 (1%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+K+ + VH ++R + V N L++ Y++ G LV AR VFD MP R ++W A+I+
Sbjct: 102 SVKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIIN 161
Query: 272 GYFENGEYMKGLMLFI--MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
GY + + L LF + VL + + A L D +LGR++HG ++K G
Sbjct: 162 GYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRL--DFELGRQIHGVIVK-GN 218
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ V + +I Y + F RM +DVV WT+MI+ L +A+ +
Sbjct: 219 RGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSN 278
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M ++ +P+E ++ SVL AC L +G +LH L ++ + + + + +L+DMY+KC
Sbjct: 279 MLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGN 338
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSA 508
+ + EVF + ++N ++WTSII G EAL FR M P N++T+VSIL A
Sbjct: 339 LADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRA 398
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC-GRMKPAWNQFNSNERDVSAW 567
C I A + G+E+HA ++ + + + L+ Y +C ++K + RDV +W
Sbjct: 399 CGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSW 458
Query: 568 NILLTGYAERGQGALAEEFFRKMID 592
+++G A G + A EF + MI+
Sbjct: 459 TAIISGCAHLGHESEALEFLKNMIE 483
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H +R I + N L+ Y + + A +VF ++P ++V++WT+II G +
Sbjct: 109 VHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 168
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+ EAL F + + + N V IL+ CA+ G++IH ++ G + + +A
Sbjct: 169 TEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLIVDSA 227
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++ Y +C + A+ F RDV W ++T +++G G A F M+ +
Sbjct: 228 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDE 283
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 231/429 (53%), Gaps = 19/429 (4%)
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
YQ M GV PDV+T+P VLR C +L G+ VH+H G + ++ NAL++MY
Sbjct: 138 YQEM-GKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYA 196
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP------- 296
KCGDL AR VFDGM +RD +SWN+MIS Y G++ + + LF MR+ +P
Sbjct: 197 KCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREM 256
Query: 297 -------DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
D++TL ++A VG +LG+E+HG ++M SV N LI MY +
Sbjct: 257 VRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDM 316
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E +F +E VV+W TM+S + S ++A ++ M G P+ +T+ + L+ C
Sbjct: 317 ECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALC 376
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A + NL G +LH ++ G Y ++ N+LIDMYSK + A VF + D ++IS+T
Sbjct: 377 ARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYT 436
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI-HAHALR 527
S+I G + + AL F +M+ +KP+ + +V++LSAC+ G ++ G+E+ + +
Sbjct: 437 SMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVIS 496
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEE 585
G+ + ++D+Y R G ++ A + ++ W L+ +RG + E
Sbjct: 497 YGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGER 556
Query: 586 FFRKMIDSK 594
RK+++ +
Sbjct: 557 AARKLLEMR 565
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 191/388 (49%), Gaps = 15/388 (3%)
Query: 100 NLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
+++R C R G +H + ++ NA +SM+ K GDL A VF M R
Sbjct: 155 SVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQR 214
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRM-------------FWVGGVKPDVYTFPCVLRT 206
D+ SWN +I YA G + EA+ L++RM GG + D T L
Sbjct: 215 DVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMVRGGAEVDYVTLVIGLNA 274
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C V L+ GKE+H +R + V NALITMY +C D+ AR++F + ++W
Sbjct: 275 CSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTW 334
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
N M+S + + + +F M V P+++T+ + ++ V + + G+E+HG+++K
Sbjct: 335 NTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVK 394
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
GF + N LI MY G + VF M+ D++S+T+MI+ Y A+
Sbjct: 395 HGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRL 454
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYS 445
++ M G PD I + +VLSAC+ G + G +L +++ + G+ + + +ID+Y+
Sbjct: 455 FEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYA 514
Query: 446 KCKCIDKALEVFHQIP-DKNVISWTSII 472
+ ++KA E+ P W +++
Sbjct: 515 RAGLLEKAEEMLDHTPFPPTSTMWAALV 542
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 229/439 (52%), Gaps = 13/439 (2%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D S+N ++ D+AL+ RM G V+PD TF L G + +++
Sbjct: 114 DTRSYNTILSATPDP---DDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQL 170
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE- 278
H R G DV V NAL+T Y + G + AR VF+ MP RD +SWNA++ G ++GE
Sbjct: 171 HALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGEC 230
Query: 279 YMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + +F+ M+++ V PD +++ SVI A G +LGR++HG+ +K+G VS+ N
Sbjct: 231 SAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIAN 290
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G ++F M +DV+SWTT++S +G + AV + M +G P
Sbjct: 291 VLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS-MDG----EDAVSLFNGMRRDGVAP 345
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+E+T ++LS+ G +H + ++T L AN+LI MY+K + +D A +F
Sbjct: 346 NEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIF 405
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG--AL 515
+P +I+W ++I G N +AL F MM +KPN T SILSA + ++
Sbjct: 406 SLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKIMKPNETTFASILSAVTAVETVSM 465
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGY 574
G+ H AL++G+ ++ AL+DMY + G ++ +W F R + AW +++
Sbjct: 466 AYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISAN 525
Query: 575 AERGQGALAEEFFRKMIDS 593
++ G F M+ S
Sbjct: 526 SKHGNYDAVVSLFNDMVGS 544
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 234/445 (52%), Gaps = 17/445 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH++ S+ V +GNA ++ + + G + A VF +M RDL SWN L+ G A+ G
Sbjct: 170 LHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGE 229
Query: 177 FD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
E + ++ RM G V+PD + V+ CG L+ G+++H ++ G E V +
Sbjct: 230 CSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIA 289
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N L+ MY KCG AR +F+ M +RD ISW ++S +GE + LF MR V
Sbjct: 290 NVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS---MDGE--DAVSLFNGMRRDGVA 344
Query: 296 PDFMTLSSVISASELVGD--EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ +T +++S+ + GD + G+ +H +K SD + N LI MY ++
Sbjct: 345 PNEVTFVAMLSS--MPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDAR 402
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+FS M ++++W +IS Y + + A+E + M + P+E T AS+LSA +
Sbjct: 403 MIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAM-MKIMKPNETTFASILSAVTAVE 461
Query: 414 NLDL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ + G H A++ GL + ++ LIDMY+K ++++ + F + +++I+WT+I
Sbjct: 462 TVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAI 521
Query: 472 ILGLRLNNRSFEALI-FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI-HAHALRI 528
I + +++A++ F M+ + P+ V L+S+L+AC G + G+EI + A +
Sbjct: 522 I-SANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKH 580
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPA 553
G ++DM R GR++ A
Sbjct: 581 GAELWPEHYACVVDMLGRAGRLEEA 605
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 181/376 (48%), Gaps = 11/376 (2%)
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H + G A V N+L Y K A VF RD S+N ++S + +
Sbjct: 72 HALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATPDPDDA 131
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ M+R V PD +T + +S + G+ L R++H + G + DV V N L
Sbjct: 132 LA--FAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNAL 189
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSM-P 397
+ Y G + KVF M ++D+VSW ++ + + + + M +G + P
Sbjct: 190 VTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRP 249
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D I++ SV+ AC G L+LG ++H A++ G+ ++ IAN L+ MY KC A +F
Sbjct: 250 DRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLF 309
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ +++VISWT++ ++ +A+ F M + + PN VT V++LS+
Sbjct: 310 EFMGERDVISWTTV-----MSMDGEDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAR 364
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYA 575
G+ IHA L+ ++ N+L+ MY + RM A F+ ++ AWN L++GYA
Sbjct: 365 EGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYA 424
Query: 576 ERGQGALAEEFFRKMI 591
+ A E F M+
Sbjct: 425 QNEMCQDALEAFLAMM 440
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 186/396 (46%), Gaps = 10/396 (2%)
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+L +++ ++ D ++ +++ C + + G +H K V + N ++M+
Sbjct: 238 FLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYY 297
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
K G G A +F M +RD+ SW ++ ++A+SL+ M GV P+ TF
Sbjct: 298 KCGTPGCARRLFEFMGERDVISWTTVMSMDG-----EDAVSLFNGMRR-DGVAPNEVTFV 351
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+L + G + G+ +H ++ N+LITMY K + AR++F MP
Sbjct: 352 AMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHS 411
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GRE 319
+ I+WNA+ISGY +N L F+ M +++ P+ T +S++SA V + G+
Sbjct: 412 EIIAWNALISGYAQNEMCQDALEAFLAMMKIM-KPNETTFASILSAVTAVETVSMAYGQM 470
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
H +K+G V LI MY G+ EE K F + +++WT +IS
Sbjct: 471 YHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGN 530
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIAN 438
D V + M G PD + + SVL+AC G + LG ++ +A + G +
Sbjct: 531 YDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGAELWPEHYA 590
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
++DM + +++A E+ Q+P +S +LG
Sbjct: 591 CVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLG 626
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ SA D H LA+ +GL ++ + N+L Y+K A VF +
Sbjct: 54 TAFSAAVARSGPDALPAFHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSR 113
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEI 521
+ S+ +I L +AL F +M+ +++P++VT LS A G +++
Sbjct: 114 DTRSYNTI---LSATPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQL 170
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
HA A R G+A D F+ NAL+ Y R G M A F RD+ +WN L+ G A+ G+
Sbjct: 171 HALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGE 229
>gi|15217493|ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein; 45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 165/590 (27%), Positives = 289/590 (48%), Gaps = 26/590 (4%)
Query: 12 TPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP---NSRLN 68
P + +R +TR P TS KPK F ++A ++ + +KNP + +
Sbjct: 34 APAKSPIRPSRTRRPSTSPAKKPKP--FRERDA-------FPSSLPLHSKNPYIIHRDIQ 84
Query: 69 ELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+LE AL LD +++ I V+ L+ C ++ G +H +
Sbjct: 85 IFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFDEALSLYQR 186
+ L + M+ G + A VF + +++SWN L+ G +G + + LS +
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +G V +VY+ V ++ G L++G + H I+ G V + +L+ MY KCG
Sbjct: 205 MRELG-VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVI 305
+ AR VFD + +RD + W AMI+G N + L LF M+ E + P+ + L++++
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 306 SASELVGDEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
V KLG+EVH +V+K + + V + LI +Y G+ G +VF + ++
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SWT ++S Y + D+A+ + M+ EG PD +TIA+VL CA L + G ++H
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A++ + + + +L+ MYSKC + + +F ++ +NV +WT++I N
Sbjct: 444 ALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAG 503
Query: 485 LIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FR M+L+ +P+SVT+ +L+ C+ + AL GKE+H H L+ F+ ++ M
Sbjct: 504 IEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKM 563
Query: 544 YVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMID 592
Y +CG ++ A F++ S W ++ Y E FR I+
Sbjct: 564 YGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG-------CNELFRDAIN 606
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 244/494 (49%), Gaps = 9/494 (1%)
Query: 27 ETSFYFKPKTRHF-----SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALK 81
E++ + + K H S K+AQ +V + +S++ + N R + + L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQ--KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
M+EL + ++ +L N+ + +GL H++ K SV L + + M+
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
K G +G A VF ++ +RD+ W +I G A EAL L++ M + P+
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
+L G V LK GKEVH HV++ Y V + LI +Y KCGD+ R VF G +
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R+ ISW A++SGY NG + + L + M++ PD +T+++V+ + K G+E+
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H Y +K F +VS+ L+ MY G E ++F R+E ++V +WT MI CY +
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+E +++M PD +T+ VL+ C+ L L LG +LH ++ S ++ +
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARI 560
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNS 499
I MY KC + A F + K ++WT+II N +A+ F +M+ PN+
Sbjct: 561 IKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNT 620
Query: 500 VTLVSILSACARIG 513
T ++LS C++ G
Sbjct: 621 FTFTAVLSICSQAG 634
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 201/414 (48%), Gaps = 16/414 (3%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ + TF +L C L GK+VHVH+ G E++ + L+ MY CG + A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGE--YMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ VFD + SWNA++ G +G+ Y L F MRE+ VD + +LS+V +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G + H IK G + V + L+ MY G +VF + +D+V W
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI+ + +A+ ++ M +E + P+ + + ++L + L LG ++H +++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ + + LID+Y KC + VF+ +N ISWT+++ G N R +AL
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
M +P+ VT+ ++L CA + A+ GKEIH +AL+ + FLPN +L+
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK-----NLFLPNVSLVTSLM 460
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
MY +CG + F+ +R+V AW ++ Y E E FR M+ SK
Sbjct: 461 VMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 161/317 (50%), Gaps = 6/317 (1%)
Query: 114 GLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ V K+ +++ + + + ++ K GD+ VF R+ SW L+ GYA
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G FD+AL + + W+ G +PDV T VL C + +K+GKE+H + ++ +
Sbjct: 395 ANGRFDQAL---RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP 451
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V +V +L+ MY KCG +FD + +R+ +W AMI Y EN + G+ +F +M
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
PD +T+ V++ + KLG+E+HG+++K F V +IKMY G+
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
F + K ++WT +I Y + L A+ ++ M + G P+ T +VLS C+
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 411 CLGNLDLGIKLHQLAMR 427
G +D + L +R
Sbjct: 632 QAGFVDEAYRFFNLMLR 648
>gi|255543589|ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547868|gb|EEF49360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 454
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 209/369 (56%), Gaps = 16/369 (4%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
++FSWN LI A++G E+L + M + +KP+ TFPC ++ C + DL GK+
Sbjct: 46 NVFSWNSLIADLARSGDSIESLRAFYSMRKLN-LKPNRSTFPCAIKACSSLLDLHWGKQT 104
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H + FG+E+D+ V +AL+ MY KCG L AR++FD + R+ + W +MI+GY +N
Sbjct: 105 HQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQNDHA 164
Query: 280 MKGLMLFIMM-----------REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
+ L+LF EVL+D + + SV+SA + + + + VHG+V+K G
Sbjct: 165 HEALLLFKQFLIEESERNEEKDEVLMDS--VAMVSVLSACSRISGKGMTKGVHGFVVKKG 222
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+DV + N L+ Y G +VF + KD +SW +MI+ Y + L +A E +
Sbjct: 223 LDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFH 282
Query: 389 MMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M G + + +T++++L ACA G L G +H +R GL +I+ +LIDMY KC
Sbjct: 283 GMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKC 342
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSIL 506
+ A + F + +KNV SWT+++ G ++ + EAL IF++ + +KPN +T VS+L
Sbjct: 343 GRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREALNIFYKMIRSGVKPNYITFVSVL 402
Query: 507 SACARIGAL 515
+AC+ G L
Sbjct: 403 AACSHAGLL 411
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 186/363 (51%), Gaps = 14/363 (3%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
K + SWN++I+ +G+ ++ L F MR++ + P+ T I A + D G+
Sbjct: 43 EKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLDLHWGK 102
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+ H + GF D+ V + L+ MY G + +F + +++V WT+MI+ Y +
Sbjct: 103 QTHQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQND 162
Query: 379 LPDKAV---------ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+A+ E+ + E + + D + + SVLSAC+ + + +H ++ G
Sbjct: 163 HAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISGKGMTKGVHGFVVKKG 222
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L + I NTL+D Y+KC + + +VF +I +K+ ISW S+I N S EA F
Sbjct: 223 LDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFH 282
Query: 490 KMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M+ +K N+VTL ++L ACA GAL GK IH +R+G+ + + +L+DMY +C
Sbjct: 283 GMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKC 342
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLF 604
GR++ A F+ E++V +W ++ GY G A F KMI S K N+ + +
Sbjct: 343 GRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREALNIFYKMIRSGVKPNYITFVSVL 402
Query: 605 RKC 607
C
Sbjct: 403 AAC 405
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 174/364 (47%), Gaps = 9/364 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +L +G ++L+ SM++LN+ + ++ C G H
Sbjct: 51 NSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLDLHWGKQTHQQALV 110
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A + M+ K G L A +F ++ R++ W +I GY + EAL L
Sbjct: 111 FGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQNDHAHEALLL 170
Query: 184 YQRMFWVGG--------VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+++ V D VL C + K VH V++ G + DV +
Sbjct: 171 FKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISGKGMTKGVHGFVVKKGLDEDVGIE 230
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLV 294
N L+ Y KCG++ +R VFD + ++D ISWN+MI+ Y +NG + +F M++ V
Sbjct: 231 NTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFHGMIKYGYV 290
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+ +TLS+++ A G + G+ +H VI+MG D+V V LI MY G + K
Sbjct: 291 KYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKCGRVQMARK 350
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F M+ K+V SWT M++ Y +A+ + M G P+ IT SVL+AC+ G
Sbjct: 351 TFDGMKEKNVKSWTAMVAGYGMHGCAREALNIFYKMIRSGVKPNYITFVSVLAACSHAGL 410
Query: 415 LDLG 418
LD G
Sbjct: 411 LDEG 414
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 252/485 (51%), Gaps = 9/485 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H + K L + + N+ ++M+ K +G A VF M +RDL SWN +I G A+
Sbjct: 341 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ 400
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADV 232
+ EA+ L+ ++ G +KPD YT VL+ +P+ L K++HVH I+ AD
Sbjct: 401 SDLEVEAVCLFMQLLRCG-LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V ALI Y + + A ++F G D ++WNAM+SGY ++ + K L LF +M +
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D TL++V+ + G++VH Y IK G+ D+ V + ++ MY+ G+
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578
Query: 353 EKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+ F + D V+WTT+IS C E ++A+ + M G +PDE TIA++ A +C
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGE-EERALHVFSQMRLMGVLPDEFTIATLAKASSC 637
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L+ G ++H A++ S + +L+DMY+KC ID A +F +I N+ +W ++
Sbjct: 638 LTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 697
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIG 529
++GL + EAL F++M L +KP+ VT + +LSAC+ G + K I + G
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYG 757
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFF 587
+ + + L D R G +K A N +S + SA + LL +G +
Sbjct: 758 IKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVA 817
Query: 588 RKMID 592
K+++
Sbjct: 818 TKLLE 822
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 222/466 (47%), Gaps = 40/466 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA--GFFD---EALSLYQR 186
L N +SM+ K G L +A VF KM +RDL SWN ++ YA++ G + EA L+ R
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLF-R 141
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ V T +L+ C + + H + + G + D V AL+ +Y+K G
Sbjct: 142 ILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFG 201
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ R++F+ MP RD + WN M+ Y E G + + L + P+ +TL +
Sbjct: 202 KVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL-- 259
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
S + GD+ +V SF N + V +++S
Sbjct: 260 -SRISGDDSEAGQVK-----------------------SFENGNDASAV------SEIIS 289
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
++S Y + ++ + M D++T VL+ L +L LG ++H +A+
Sbjct: 290 RNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMAL 349
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL + ++N+LI+MY K + I A VF+ + ++++ISW S+I G+ ++ EA+
Sbjct: 350 KLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVC 409
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F +++ LKP+ T+ S+L A + + L K+IH HA++ D F+ AL+D Y
Sbjct: 410 LFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAY 469
Query: 545 VRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R MK A F N D+ AWN +++GY + G E F M
Sbjct: 470 SRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALM 515
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 37/462 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ A +++++KFG + +F +M RD+ WN+++ Y + GF +EA+ L F
Sbjct: 189 VAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHTS 247
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ P+ T + R G D + G+ V F D V+ +I
Sbjct: 248 GLHPNEITLRLLSRISGD--DSEAGQ-----VKSFENGNDASAVSEII------------ 288
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
S N ++SGY G+Y L F+ M E ++ D +T V++ + +
Sbjct: 289 -------------SRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRL 335
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
LG++VH +K+G ++V N LI MY VF+ M +D++SW ++I
Sbjct: 336 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVI 395
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGL 430
+ S L +AV + + G PD T+ SVL A + L L L ++H A++T
Sbjct: 396 AGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNN 455
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
++ ++ LID YS+ +C+ +A EV + ++++W +++ G ++ + L F
Sbjct: 456 VADSFVSTALIDAYSRNRCMKEA-EVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFAL 514
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + TL ++L C + A+ GK++HA+A++ G D ++ + +LDMYV+CG
Sbjct: 515 MHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 574
Query: 550 MKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
M A F+S D AW L++G E G+ A F +M
Sbjct: 575 MSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQM 616
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 41/381 (10%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
LR DL GK H ++ + +VN LI+MY KCG L AR VFD MP+RD
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 264 ISWNAMISGYFENGEYM-----KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+SWN++++ Y ++ E + + +LF ++R+ +V MTLS ++ G
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
HGY K+G D V L+ +YL FG +EG +F M +DVV W M+ Y
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++A++ G P+EIT+ +LS + + +K + +S II N
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITL-RLLSRISGDDSEAGQVKSFENGNDASAVSEIISRN 291
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI--FFRKMMLNLK 496
++ Y L+ + AL+ F + +L+
Sbjct: 292 KILSGY--------------------------------LHAGQYSALLKCFMDMVESDLE 319
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ VT + +L+ R+ +L G+++H AL++G+ + N+L++MY + ++ A
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379
Query: 557 FNS-NERDVSAWNILLTGYAE 576
FN+ +ERD+ +WN ++ G A+
Sbjct: 380 FNNMSERDLISWNSVIAGIAQ 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M+ + + DE + L + ++G +H+ K +
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + M+ K G + A+ +F ++ ++ +WN ++ G A+ G EAL L+++M + G
Sbjct: 663 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESL-G 721
Query: 193 VKPDVYTFPCVLRTC 207
+KPD TF VL C
Sbjct: 722 IKPDKVTFIGVLSAC 736
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
LM GK HA L + + FL N L+ MY +CG + A F+ ERD+ +WN +L
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 574 YAERGQGAL 582
YA+ +G +
Sbjct: 122 YAQSSEGVV 130
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 260/549 (47%), Gaps = 47/549 (8%)
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
R C R LHS + K+ + + N +S++ K + A +F +M R++
Sbjct: 11 RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIV 70
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SW ++ + EALSLY M +P+ + + VL+ CG V +++ GK VH H
Sbjct: 71 SWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLV---------------------------- 254
+ + + D+ ++NAL+ MYVKCG L A+ V
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190
Query: 255 ---FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
FD MP+ D +SWN++I+G +N + L MM + D T SV+ A
Sbjct: 191 MKLFDKMPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCS 249
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS----- 366
+ LGRE+H Y+IK GF + LI MY S E K+F + VS
Sbjct: 250 DELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLAL 309
Query: 367 WTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
W +M+S G V+ VE M M G D T + VL C NL L ++H
Sbjct: 310 WNSMLS---GHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHG 366
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSF 482
+ +G ++ + LID+Y+K I+ AL +F ++PDK+V++W+S+I G R +
Sbjct: 367 FVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKL 426
Query: 483 EALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+F + L L+ + + +L AC+ + + GK++H+ L+ G +G + AL+D
Sbjct: 427 AFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALID 486
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRK 599
MY +CG ++ A + F +E D +W ++ G A+ G+ A KMI+S K N
Sbjct: 487 MYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKIT 546
Query: 600 LMGLFRKCQ 608
++G+ C+
Sbjct: 547 ILGVLTACR 555
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 235/473 (49%), Gaps = 36/473 (7%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLV-RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+AL + M E I L + V + C R + G +H + + + + L NA
Sbjct: 86 HEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNA 145
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM------FW 189
L M+VK G L A VF ++ ++ SWN LI GYAK G D+A+ L+ +M W
Sbjct: 146 LLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSW 205
Query: 190 VG-----------------------GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
G+K D +TFP VL+ CG +L G+E+H ++I+
Sbjct: 206 NSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKS 265
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS-----WNAMISGYFENGEYMK 281
G+E+ ++ALI MY C L A +FD + +S WN+M+SG+ NG+Y++
Sbjct: 266 GFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVE 325
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L + M V DF T S V+ + L +VHG+VI G+ D V + LI
Sbjct: 326 ALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILID 385
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
+Y G+ ++F R+ KDVV+W+++I+ A + M G D
Sbjct: 386 IYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFV 445
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
I+ VL AC+ L + G ++H L ++ G S ++ LIDMY+KC I+ AL +F +
Sbjct: 446 ISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLS 505
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+ + +SWTSII+G N R+ EA+ KM+ + KPN +T++ +L+AC G
Sbjct: 506 EIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSG 558
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 38/434 (8%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D+ R C +K K +H H+I+ G+ + ++N +I++Y KC ++ AR +F
Sbjct: 2 DLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD-PDFMTLSSVISASELVGDE 314
D MP R+ +SW M+S + + L L+ M E ++ P+ S+V+ A LV +
Sbjct: 62 DEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNV 121
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LG+ VH ++ + D+ + N L+ MY+ G+ + ++VF + K+ SW T+I Y
Sbjct: 122 ELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGY 181
Query: 375 EGSVLPDKAVETY------------------------------QMMEAEGSMPDEITIAS 404
L D A++ + MM +G DE T S
Sbjct: 182 AKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPS 241
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL AC C L LG ++H +++G S + LIDMYS CK + +A ++F Q +
Sbjct: 242 VLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNS 301
Query: 465 VIS-----WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+S W S++ G +N EAL M + ++ + T +L C L
Sbjct: 302 SVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLA 361
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
++H + G D + + L+D+Y + G + A F ++DV AW+ L+TG A
Sbjct: 362 SQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421
Query: 578 GQGALAEEFFRKMI 591
G LA F MI
Sbjct: 422 GSDKLAFSLFMDMI 435
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 212/454 (46%), Gaps = 16/454 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L N S +AL+++ M + +DE ++++ C G +H + K
Sbjct: 206 NSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIK 264
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-----CDRDLFSWNVLIGGYAKAGFFD 178
+ S +A + M+ L A +F + L WN ++ G+ G +
Sbjct: 265 SGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYV 324
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
EALS+ M GV+ D YTF VL+ C +L +VH VI GYE D V + L
Sbjct: 325 EALSMISHMHR-SGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSIL 383
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
I +Y K G + A +F+ +P +D ++W+++I+G G LF+ M + + D
Sbjct: 384 IDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDH 443
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+S V+ A + + G++VH +K G+ + V LI MY G+ E+ +F
Sbjct: 444 FVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGC 503
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ D +SWT++I + ++A+ M G+ P++ITI VL+AC G ++
Sbjct: 504 LSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEA 563
Query: 419 IKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILG 474
+ + + GLI N ++D+ + ++A+++ ++ PDK + W+S++
Sbjct: 564 WDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTI--WSSLLGA 621
Query: 475 L-RLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
NR ++ + +L P V++ +LS
Sbjct: 622 CGTYKNRDLANIV--AEHLLATSPEDVSVYIMLS 653
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 230/452 (50%), Gaps = 16/452 (3%)
Query: 84 DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKF 143
D ++ D V ++ C R G +H+ + K+ H +V + N+ + M+ K
Sbjct: 31 DKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G + A +F M D+ + SW ++ G+ + G FDE +S++ RM ++P+ YT +
Sbjct: 91 GRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET--LQPNEYTLAVI 148
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C DLK + +H H+I+ G+ D + N+LI Y K G LV A + + RD
Sbjct: 149 LQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDV 208
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASELVGDE-----K 315
+SW ++ISG NG K L+ F M+E V P D LS+ A+ L G K
Sbjct: 209 VSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLK 268
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG ++HGY IK GF V N LI MY + ++F +M +D+VSW TMIS
Sbjct: 269 LGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLV 328
Query: 376 GSVLPDKAVETYQMMEAEGS----MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+A+ + + G PD +TI + + AC+ L +L LG +H R GLI
Sbjct: 329 KGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLI 388
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
I + N+L+DMY KC + A +V ++P +++ SW S+I +N AL F+++
Sbjct: 389 CDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQL 448
Query: 492 MLN--LKPNSVTLVSILSACARIGALMCGKEI 521
+PN++T +ILSACA G + G EI
Sbjct: 449 KNTGAHRPNAITFTNILSACAHAGLVAEGFEI 480
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 228/417 (54%), Gaps = 19/417 (4%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T VL +C DL+ G +H ++++ G +V V N+L+ MY KCG + A +F
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP + +SW +M+SG+ + G + + + +F M E L P+ TL+ ++ A D K
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLETL-QPNEYTLAVILQACAQKRDLK 159
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L + +H ++IK GF D + N LI Y G EK+ R+ +DVVSWT++IS
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCV 219
Query: 376 GSVLPDKAVETYQMMEAEGSMPDE--------ITIASVLSACACLGNLDLGIKLHQLAMR 427
+ + +KA+ + M+ +G P+ TIA++L C+ L LG ++H ++
Sbjct: 220 LNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIK 279
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G I+ N+LI MY++ + D A ++F ++ ++++SW ++I L + S++AL+
Sbjct: 280 HGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALML 339
Query: 488 FRKMMLN-----LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
++ N + P+ VT+++ + AC+ + +L G+ IH + R G+ D F+ N+L+D
Sbjct: 340 LSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVD 399
Query: 543 MYVRCGRMKPAWNQFNSNE---RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
MY +CGR+ A + S E RD+ +WN L+ Y G G A F+++ ++ +
Sbjct: 400 MYGKCGRLHLA--EKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAH 454
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 15/371 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S ++ C G+ ++ + M E + +E L +++ C KR +H + K
Sbjct: 112 TSMMSGHCQRGAFDEVISIFWRMLE-TLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIK 170
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + L N+ + + K G L A + ++ RD+ SW +I G G ++AL
Sbjct: 171 TGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLF 230
Query: 184 YQRMFWVGGVKPDV--------YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ M GV P+ T +L+ C LK G+++H + I+ G+ V
Sbjct: 231 FFEM-QEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVE 289
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV--- 292
N+LI MY + A +F M RD +SWN MIS + + LML +
Sbjct: 290 NSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGS 349
Query: 293 -LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
++ PDF+T+ + I A + +LG+ +HGY+ + G D+ V N L+ MY G
Sbjct: 350 DMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHL 409
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACA 410
EKV M +D+ SW ++I+ Y + A+ ++ ++ G+ P+ IT ++LSACA
Sbjct: 410 AEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACA 469
Query: 411 CLGNLDLGIKL 421
G + G ++
Sbjct: 470 HAGLVAEGFEI 480
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
++ D +T VLS+CA +L LG +H +++GL + + +AN+L+DMY+KC I+ A
Sbjct: 38 TLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAA 97
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGA 514
++F +PDK V+SWTS++ G E + F +M+ L+PN TL IL ACA+
Sbjct: 98 KLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLETLQPNEYTLAVILQACAQKRD 157
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
L + IH H ++ G D FL N+L+D Y + G + A RDV +W +++G
Sbjct: 158 LKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISG 217
Query: 574 YAERGQGALAEEFFRKM 590
G A FF +M
Sbjct: 218 CVLNGMVEKALLFFFEM 234
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 245/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +++ G L A +FG+M D+ +WNV+I G+ K G A+ + M VK
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKST 326
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL G V +L G VH I+ G +++ V ++L++MY KC + A VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +++ + WNAMI GY NGE K + LF+ M+ + D T +S++S D ++
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G + H +IK + ++ V N L+ MY G E+ ++F RM +D V+W T+I Y
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A + ++ M G + D +AS L AC + L G ++H L+++ GL +
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
++LIDMYSKC I A +VF +P+ +V+S ++I G NN EA++ F++M+ +
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGV 625
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAW 554
P+ +T +I+ AC + +L G + H + G + +G +L +LL MY+ M A
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEAC 685
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ S+ + + W +++G+++ G A +F+++M
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 240/462 (51%), Gaps = 6/462 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + ++ M+ +D+ +L+ C + G HS++ K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GNA + M+ K G L A +F +MCDRD +WN +IG Y + EA L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM + G+ D L+ C V L +GK+VH ++ G + D+ ++LI MY
Sbjct: 517 FKRMN-LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR VF +P+ +S NA+I+GY +N + ++LF M V+P +T ++
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCN-PLIKMYLSFGNREEGEKVFSRMES- 361
++ A LG + HG + K GFS + L+ MY++ E +FS + S
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K +V WT M+S + + ++A++ Y+ M +G +PD+ T +VL C+ L +L G +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L + +NTLIDMY+KC + + +VF ++ + NV+SW S+I G N
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ +AL F M ++ P+ +T + +L+AC+ G + G++I
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 259/522 (49%), Gaps = 11/522 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A++Y +M++ ++ L +++ D GL +H+ K ++ +G++ +S
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K + A VF + +++ WN +I GYA G + + L+ M G D +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDF 429
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF +L TC DL+ G + H +I+ ++ V NAL+ MY KCG L AR +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD ++WN +I Y ++ + LF M + D L+S + A V G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VH +K G D+ + LI MY G ++ KVFS + VVS +I+ Y +
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS---YII 435
L ++AV +Q M G P EIT A+++ AC +L LG + H + G S Y+
Sbjct: 610 L-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
I +L+ MY + + +A +F ++ K+++ WT ++ G N EAL F+++M +
Sbjct: 669 I--SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ P+ T V++L C+ + +L G+ IH+ + D N L+DMY +CG MK +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 554 WNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F+ R +V +WN L+ GYA+ G A + F M S
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 242/515 (46%), Gaps = 38/515 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ G + L+ S+ E I ++ ++ C + + G +H + K
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ G A + M+ K + A VF + D + W L GY KAG +EA+ +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM G +PD F V+ T Y+
Sbjct: 249 FERM-RDEGHRPDHLAFVTVINT-----------------------------------YI 272
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ G L ARL+F M D ++WN MISG+ + G + F MR+ V TL S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA +V + LG VH IK+G + ++ V + L+ MY E KVF +E K+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W MI Y + K +E + M++ G D+ T S+LS CA +L++G + H
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++ L + + N L+DMY+KC ++ A ++F ++ D++ ++W +II + E
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F++M L + + L S L AC + L GK++H +++ G+ D ++L+D
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
MY +CG +K A F+S E V + N L+ GY++
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 222/462 (48%), Gaps = 39/462 (8%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
RLGNA + ++ K + +A F ++D+ +WN ++ Y+ G + L + +F
Sbjct: 96 RLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF-E 153
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ P+ +TF VL TC +++ G+++H +I+ G E + AL+ MY KC +
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ + + + W + SGY + G + +++F MR+ PD + +VI+
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--- 270
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
Y+ G ++ +F M S DVV+W M
Sbjct: 271 --------------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + A+E + M T+ SVLSA + NLDLG+ +H A++ GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I + ++L+ MYSKC+ ++ A +VF + +KN + W ++I G N S + + F
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + T S+LS CA L G + H+ ++ +A + F+ NAL+DMY +CG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F +RD WN ++ Y + + A + F++M
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 42/388 (10%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK VH + G +++ + NA++ +Y KC + A FD + K D +WN+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSM 134
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y G+ K L F+ + E + P+ T S V+S + + GR++H +IKMG +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
L+ MY + +VF + + V WT + S Y + LP++AV ++ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD + +V++ LG L
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKL-----------------------------------KD 279
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI---FFRKMMLNLKPNSVTLVSILSAC 509
A +F ++ +V++W +I G R E + FF ++K TL S+LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISG--HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ L G +HA A+++G+A + ++ ++L+ MY +C +M+ A F + E++ WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 569 ILLTGYAERGQGALAEEFFRKMIDSKGN 596
++ GYA G+ E F M S N
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYN 425
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTG 573
AL GK +H+ +L +G+ +G L NA++D+Y +C ++ A QF+ E+DV+AWN +L+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSM 134
Query: 574 YAERGQ 579
Y+ G+
Sbjct: 135 YSSIGK 140
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 278/557 (49%), Gaps = 23/557 (4%)
Query: 54 NTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDA---LVNLVRLCEWKRG 110
T + +P++++ G Q L+ EL++C L ++++ +
Sbjct: 10 TTVAPTCSSPSNQIKSFLSKGLYHQTLQLFS---ELHLCGHSSISFFLPSVIKASSSAQC 66
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
+ G LH + KT SH + N+ ++M+ KF D+G A VF M RD +WN LI G
Sbjct: 67 HTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLING 126
Query: 171 YAKAGFFDEALSLYQRMFWVGGV-KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI---RF 226
Y G+ +EAL ++ +G V KP++ V+ CG K G+++H V+ R
Sbjct: 127 YLHNGYLEEALEALNDVYLLGLVPKPEL--LASVVSMCGRRMGSKIGRQIHALVVVNERI 184
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G + + AL+ Y +CGD + A VFDGM ++ +SW MISG + +Y + F
Sbjct: 185 G--QSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACF 242
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ V P+ +T +++SA G K G+E+HGY + GF S + L+ MY
Sbjct: 243 RAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQC 302
Query: 347 GNREE-GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G E +F +DVV W+++I + KA++ + M E P+ +T+ +V
Sbjct: 303 GEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAV 362
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+SAC L +L G LH + G I + N LI+MY+KC C++ + ++F ++P+++
Sbjct: 363 ISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDN 422
Query: 466 ISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
++W+S+I L+ +AL IF+ +KP+++T +++LSAC G + G+ I
Sbjct: 423 VTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQ 482
Query: 525 A---LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQ 579
I + + + L+D+ R G+++ A + SA W+ L++ G+
Sbjct: 483 VRADCEIPLTIEHY--ACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGR 540
Query: 580 GALAEEFFRKMIDSKGN 596
+AE ++I S+ N
Sbjct: 541 LDIAEMLAPQLIRSEPN 557
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 256/496 (51%), Gaps = 14/496 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L R C+ R ++ LH+ +S T + + + + + G + + VF + D
Sbjct: 7 LFRSCKTLRQLNQ---LHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPD 63
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
F W VLI + + F+EA+ LY +M + + FP VLR C G D+ G +VH
Sbjct: 64 SFMWGVLIKCHVWSHAFEEAILLYDKML-CNEAQITSFVFPSVLRACAGFGDMFIGAKVH 122
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I+ G++ D + +L+ +Y + G L AR VFD +P RD +SW+++IS Y + GE
Sbjct: 123 GRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEAN 182
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L +F ++ V D++ + SV A +G KL + +HGY+++ ++ N LI
Sbjct: 183 EALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLI 242
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+MY S + E++F M +K +SWT+MI CY S +A E + M P+ I
Sbjct: 243 EMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVI 302
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
TI VL +C+ L L G +H A++ G+ + LI++Y+ C + +V
Sbjct: 303 TIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLA 362
Query: 460 IPDKNVISWTSIILGLRLNNRSF---EALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
I ++NV+SW ++ L +N R EAL+ F +M L + +L S +SAC +G+L
Sbjct: 363 IGERNVVSWNTL---LSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSL 419
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G++IH +A++ + F+ NAL+ MY RCG A+ FN ++ AWN +++G+
Sbjct: 420 QLGRQIHGYAIKRCI-LGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGF 478
Query: 575 AERGQGALAEEFFRKM 590
+ G A +M
Sbjct: 479 VQSGNSIEAIHLVDQM 494
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 246/479 (51%), Gaps = 7/479 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ L ++ + G L A VF + RDL SW+ +I Y G +EAL ++ R+ V
Sbjct: 138 TSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMF-RLLVNERV 196
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
K D V C + LK K +H +++R + + N+LI MY C DL A
Sbjct: 197 KLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAER 256
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F M + ISW +MI Y +G + + +F+ M E+ V+P+ +T+ V+ + +
Sbjct: 257 IFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSW 316
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNP-LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G+ +H Y +K G + P LI++Y G EKV + ++VVSW T++S
Sbjct: 317 LREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLS 376
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
L ++A+ + M+ G M D +++S +SAC +G+L LG ++H A++ ++
Sbjct: 377 INARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILG 436
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ N LI MYS+C D A +F+ I K+ ++W SII G + S EA+ +M
Sbjct: 437 EFV-KNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMY 495
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
LN LK V +S + ACA + L GK +H + GV D ++ AL DMY +CG ++
Sbjct: 496 LNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLR 555
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLFRKC 607
A F+S +E+ V +W+ +++GY G+ A FF +M++ K N M + C
Sbjct: 556 TAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSAC 614
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 228/446 (51%), Gaps = 6/446 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ + M+ DL A +F M ++ SW +I Y ++G+F EA ++ +M +
Sbjct: 237 LDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELK 296
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDLVR 250
V+P+V T VL++C G+ L+ GK +H + ++ G D + LI +Y CG L
Sbjct: 297 -VEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGY 355
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
V + +R+ +SWN ++S G + + L+LF+ M++ + DF +LSS ISA
Sbjct: 356 CEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGN 415
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG +LGR++HGY IK + V N LI MY G + +F+ ++ K V+W ++
Sbjct: 416 VGSLQLGRQIHGYAIKRCILGEF-VKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSI 474
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + S +A+ M ++ S + ACA + L+ G LH + G+
Sbjct: 475 ISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGV 534
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ I L DMY+KC + A VFH + +K+V+SW+++I G ++ R A+ FF +
Sbjct: 535 EKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQ 594
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+ L +KPN +T ++ILSAC+ G++ GK GV L+D+ R G
Sbjct: 595 MVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGD 654
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTG 573
+ A+ NS D S LL G
Sbjct: 655 VNGAYKIINSMPFPADASVLGNLLNG 680
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G E+AL MQ+ + +D +L + + C G +H K L +
Sbjct: 381 QGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFV 439
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA + M+ + G A+ +F + + +WN +I G+ ++G EA+ L +M+ +
Sbjct: 440 KNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMY-LNC 498
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K F ++ C + L++GK +H +I +G E D+ + AL MY KCGDL A
Sbjct: 499 LKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAE 558
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF M ++ +SW+AMISGY +G + F M E+ + P+ +T +++SA G
Sbjct: 559 GVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSG 618
Query: 313 DEKLGR 318
+ G+
Sbjct: 619 SVEQGK 624
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+C L L+ +LH T L + + LI+ Y++ I + VF + +
Sbjct: 10 SCKTLRQLN---QLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFM 66
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W +I ++ EA++ + KM+ N + S S+L ACA G + G ++H +
Sbjct: 67 WGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRII 126
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
+ G D F+ +LL +Y G + A F+ RD+ +W+ +++ Y ++G+ A E
Sbjct: 127 KCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALE 186
Query: 586 FFRKMIDS--KGNWRKLMGLFRKC 607
FR +++ K +W ++ + C
Sbjct: 187 MFRLLVNERVKLDWVIMLSVTEAC 210
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 253/505 (50%), Gaps = 9/505 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +AL ++++ + G LH+++ L N ++M+ K G+L HA +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R+L SW +I G ++ F EA+ + M G V P + F +R C + +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSI 122
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ GK++H ++FG +++ V + L MY KCG + A VF+ MP +D +SW AMI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ GE+ + L+ F M + V D L S + A + K GR VH V+K+GF D+
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242
Query: 334 SVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N L MY G+ E VF E ++VVS+T +I Y + +K + + +
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G P+E T +S++ ACA L+ G +LH M+ +++ L+DMY KC +++
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 362
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A++ F +I D I+W S++ + +A+ F +M+ +KPN++T +S+L+ C+
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422
Query: 512 IGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
G + G + ++ GV + ++D+ R GR+K A N E + W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 569 ILLTG---YAERGQGALAEEFFRKM 590
L + ++ G LA E K+
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKL 507
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 207/417 (49%), Gaps = 5/417 (1%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D V++T L+RGK++H +I GY + N L+ MY KCG+L A +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+R+ +SW AMISG +N ++ + + F MR P SS I A +G +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+++H +K G ++ V + L MY G + KVF M KD VSWT MI Y
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++A+ ++ M E D+ + S L AC L G +H ++ G S I
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEAL-IFFRKMML 493
+ N L DMYSK ++ A VF + +NV+S+T +I G + + L +F
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++PN T S++ ACA AL G ++HA ++I D F+ + L+DMY +CG ++ A
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 363
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ + AWN L++ + + G G A + F +M+D K N + L C
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 420
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 215/445 (48%), Gaps = 7/445 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L N +A++ M+ + A + +R C + G +H + K
Sbjct: 78 ISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGI 137
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ +G+ M+ K G + A VF +M +D SW +I GY+K G F+EAL +++
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKK 197
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M V D + L CG + K G+ VH V++ G+E+D+ V NAL MY K G
Sbjct: 198 MI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAG 256
Query: 247 DLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
D+ A VF G+ R+ +S+ +I GY E + KGL +F+ +R ++P+ T SS+
Sbjct: 257 DMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
I A + G ++H V+K+ F +D V + L+ MY G E+ + F +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE 375
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQ 423
++W +++S + L A++ ++ M G P+ IT S+L+ C+ G ++ G+ +
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYS 435
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSF 482
+ G++ + +ID+ + + +A E +++P + N W S + R++
Sbjct: 436 MDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495
Query: 483 EALIFFRKMMLNLKPNSVTLVSILS 507
+ K ++ L+P + + +LS
Sbjct: 496 MGKLAAEK-LVKLEPKNSGALVLLS 519
>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
Length = 644
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 261/527 (49%), Gaps = 41/527 (7%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR- 159
L+R C + G +H+ ++++ + +GN + M++K G L A VF ++ +
Sbjct: 1 LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60
Query: 160 --DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+L +W LI YA+ G A+ L+Q+M + G PD T + CG +L+ GK
Sbjct: 61 VVNLVAWTALIAAYARNGQTKLAIRLFQQM-QLEGNSPDRITLVTIFEACGNPENLEDGK 119
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H + +DV + ++LITMY KCG L A L+F M + + ++WN+++ + ++
Sbjct: 120 KIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHD 176
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L+ M + P T +V++A + + G+ VH +++ G DDV V
Sbjct: 177 RVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQT 236
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G+ E +VF RM DV+ W+ +IS + ++++ ++ M+ EG+ P
Sbjct: 237 ALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRP 296
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ +T+ SVLSAC L+ G +H+ + G +I+ N ++ MY KC ++ A +VF
Sbjct: 297 NNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVF 356
Query: 458 HQIPDKN--------------------------------VISWTSIILGLRLNNRSFEAL 485
H++P +N ++W +++ +++
Sbjct: 357 HRVPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSI 416
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR+M+ P+ VT++++L+ CA + AL GK I A ++ + + NA+L+MY
Sbjct: 417 QLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMY 476
Query: 545 VRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG A F+ + RD +WN L+ Y +G A + F+ M
Sbjct: 477 AKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAM 523
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 230/476 (48%), Gaps = 37/476 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + A++ MQ D LV + C ++G +H+ +S + V L
Sbjct: 77 NGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAYLS---CNSDVVL 133
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G++ ++M+ K G L A +F M + + +WN L+G + + + A+ LY M G
Sbjct: 134 GSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELYWEMLQCGF 193
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P TF VL + L+ GK VH ++ G+E DV V AL+ MY KCG +V A
Sbjct: 194 L-PSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAV 252
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD MP+ D I W+A+IS + EY + L LF M+ P+ +TL SV+SA E
Sbjct: 253 EVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQ 312
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------- 358
+ G+ +H V++ G+ D+ V N ++ MY G+ E+ VF R
Sbjct: 313 ALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALI 372
Query: 359 ------------------MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
M +D V+W TM+S E +++ ++ M EG+ PD++
Sbjct: 373 SMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKV 432
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI +VL+ CA L L G + T L + +I N +++MY+KC D+A +F +
Sbjct: 433 TILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVM 492
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
++ +SW ++I +R A F+ M L P++VT +ILS C+ G L
Sbjct: 493 QGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLL 548
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 47/408 (11%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H + + V + A ++M+ K G + A VF +M D+ W+ +I +
Sbjct: 216 GKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVN 275
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD-- 231
++E+L L+++M + G +P+ T VL C G L+ GK +H V+ GYE D
Sbjct: 276 CAEYEESLRLFRKM-QLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLI 334
Query: 232 ------------------------------VDVVNALITMYVKCGDLVRARLVFDGMPKR 261
V + NALI+MY +CG +AR +FD M +R
Sbjct: 335 VGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAER 394
Query: 262 DRISWNAM--ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D ++WN M +S E+G + LF M + PD +T+ +V++ + + G+
Sbjct: 395 DAVTWNTMMSVSEQLEHGR--DSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKA 452
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+ ++ S + + N ++ MY G+R+E ++FS M+ +D VSW +I Y
Sbjct: 453 ICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSR 512
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
A + +Q M+ EGS PD +T ++LS C+ G L +K + MR Y + A T
Sbjct: 513 GRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRW-MRE---DYYVEAET 568
Query: 440 -----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
++D+ + + +A EV ++P + I WT+++ +++ +
Sbjct: 569 GHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGET 616
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 239/464 (51%), Gaps = 14/464 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L + G L A VF ++ D ++N LI Y+ G F A+ LY+ M V P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR-VAPN 99
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTFP VL+ C + DL+ G+ +H H G D+ V ALI +Y++C AR VF
Sbjct: 100 KYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLM-LFIMMREVLVDPDFMTLSSVISASELVGDEK 315
MP RD ++WNAM++GY +G Y + L M + P+ TL S++ G
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219
Query: 316 LGREVHGYVIKMGF---SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G +H Y ++ + V + L+ MY +VF M ++ V+W+ +I
Sbjct: 220 QGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIG 279
Query: 373 CYEGSVLPDKAVETYQM---MEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
G VL D+ E + + M EG ++AS L CA L +L +G +LH L ++
Sbjct: 280 ---GFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G+ + + +N+L+ MY+K I++A F +I K+ IS+ +++ G N ++ EA + F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM N++P+ T+VS++ AC+ + AL GK H + G+A + + N+L+DMY +C
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC 456
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
G++ + F+ RDV +WN ++ GY G G A F M
Sbjct: 457 GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGM 500
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 224/460 (48%), Gaps = 22/460 (4%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H + + A + ++++ G A VF KM RD+ +WN ++ GYA G + A++
Sbjct: 132 HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLD 191
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV---NALITMYV 243
M GG++P+ T +L L +G +H + +R E + + V AL+ MY
Sbjct: 192 MQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYA 251
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD-FMTLS 302
KC LV A VF GMP R+ ++W+A+I G+ + LF +++LV+ F++ +
Sbjct: 252 KCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLF---KDMLVEGLCFLSAT 308
Query: 303 SVISASEL---VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV SA + + D +G ++H + K G D++ N L+ MY G E F +
Sbjct: 309 SVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD +S+ ++S + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 369 AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL I N+LIDMY+KC ID + +VF ++P ++V+SW ++I G ++
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA F M P+ VT + +++AC+ G + GK H G LP
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK----HWFDTMTHKYGILPR 544
Query: 539 -----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++D+ R G + A+ S + DV W LL
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 226/458 (49%), Gaps = 11/458 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ L +G A+ +L MQ+ + + LV+L+ L +G +H+
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229
Query: 123 KT---MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ + V +G A L M+ K L +A VF M R+ +W+ LIGG+ E
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A +L++ M G + LR C + DL G ++H + + G AD+ N+L+
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+MY K G + A + FD + +D IS+ A++SG +NG+ + ++F M+ ++PD
Sbjct: 350 SMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I A + + G+ HG VI G + + S+CN LI MY G + +VF +M
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++DVVSW TMI+ Y L +A + M+ +G PD++T +++AC+ G + G
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529
Query: 420 K-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ + G++ + ++D+ ++ +D+A + +P K +V W +++ R+
Sbjct: 530 HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRI 589
Query: 478 NNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ + +++ L P N V L +I SA R
Sbjct: 590 -HKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 223/422 (52%), Gaps = 12/422 (2%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD +F L++C + L GK +H+ VI G + V NAL+ MY KCG L A
Sbjct: 5 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-VLVDPDFMTLSSVISASEL 310
R VFDGM RD ISWNA+I+ Y + G + + LF M+E ++PD +T +V+SA
Sbjct: 65 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 124
Query: 311 VGDEKLGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWT 368
+ + V + G D DV + N L+ MY G+ + VF RM+ + DVV WT
Sbjct: 125 PSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWT 184
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TMIS Y + A+E +Q ME E + +PD T+AS L+AC L+ G ++H L +
Sbjct: 185 TMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIE 244
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-I 486
G S +++ N L+ MY+ C + ALE F ++ +NV+SW ++I +N EA I
Sbjct: 245 RGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRI 304
Query: 487 FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYV 545
F++ + ++PNSVT V+ LS C+ A G I A + V + D + NALL Y
Sbjct: 305 FYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGL-IRALEVEKRVESLDALVGNALLHTYA 363
Query: 546 RCGRMKPAWNQFNSNER---DVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRKLMG 602
+ G++ F E+ DV WN ++ G G+ A E + + G+W L+G
Sbjct: 364 KLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQ--KNLGSWNGLLG 421
Query: 603 LF 604
+
Sbjct: 422 AY 423
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 237/507 (46%), Gaps = 53/507 (10%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + + ++ C + G ++H +V ++ + +GNA ++M+ K G L A VF
Sbjct: 9 DNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVF 68
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M RD+ SWN +I YA+AG EA+ L+Q M G ++PD TF V+ C L
Sbjct: 69 DGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSAL 128
Query: 214 KRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS-WNAMIS 271
+ + V G ++DV + NAL+ MY KCG L A +VF+ M RD + W MIS
Sbjct: 129 EAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMIS 188
Query: 272 GYFENGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMG 328
Y ++G L LF M +E + PD TL+S ++A G E L GRE+H VI+ G
Sbjct: 189 VYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAAC--TGPEMLEEGREIHALVIERG 246
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
++ V N L+ MY + G ++ + F +M ++VVSW MI+ Y +A +
Sbjct: 247 CESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFY 306
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M+ EG P+ +T + LS C+ + G I+ ++ R + ++ N L+ Y+K
Sbjct: 307 QMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLD-ALVGNALLHTYAKL 365
Query: 448 KCIDKALEVFHQIPDK--NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSI 505
+D+ VF ++ + +V++W ++I G N FR L L P
Sbjct: 366 GKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGE-------FRN-ALELMPQK------ 411
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
+G+ N LL Y+ GR+ F ERDV
Sbjct: 412 -----NLGSW----------------------NGLLGAYIHVGRLADTRKLFEEMEERDV 444
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
WN++L Y ER A FR+MI
Sbjct: 445 ITWNMILGAYVERDMAKEAVRLFRRMI 471
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/590 (28%), Positives = 262/590 (44%), Gaps = 75/590 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + G ++A++ +MQE I D V +V C + + ++V
Sbjct: 80 NAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAANRIFALVE 139
Query: 123 -KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD-LFSWNVLIGGYAKAGFFDEA 180
+ + V LGNA ++M+ K G L A VF +M RD + W +I YA+ G+ + A
Sbjct: 140 ERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISVYAQDGYSEAA 199
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L L+Q+M + PD +T L C G L+ G+E+H VI G E+++ V NAL++
Sbjct: 200 LELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVS 259
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY CG L A F M +R+ +SWNAMI+ Y + + +F M+ V P+ +T
Sbjct: 260 MYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVT 319
Query: 301 LSSVISA------------------------SELVGD------EKLGR--EVHGYVIKMG 328
+ +S LVG+ KLG+ EV +M
Sbjct: 320 FVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRME 379
Query: 329 FS-DDVSVCNPLIK----------------------------MYLSFGNREEGEKVFSRM 359
DDV N +I+ Y+ G + K+F M
Sbjct: 380 KQRDDVVTWNAVIEGSVRNGEFRNALELMPQKNLGSWNGLLGAYIHVGRLADTRKLFEEM 439
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
E +DV++W ++ Y + +AV ++ M AEG+ P+ IT ++L ACA +L G
Sbjct: 440 EERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGACAGEASLAEGR 499
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H+L G S + + N L+DM+ KC + A + F +I K+ SW ++ L N
Sbjct: 500 RVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNG 559
Query: 480 RSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGFL 536
+ EAL F R +KP VT + + AC+ G L K I A +LR G+A
Sbjct: 560 DAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFA-SLRHDYGIAPLPSH 618
Query: 537 PNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLT-----GYAERGQ 579
+ + D+ R G + A RD W LL+ G ERG+
Sbjct: 619 YSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVERGR 668
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 269/519 (51%), Gaps = 18/519 (3%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+ +++LC +G +HS + + ++ L + +VKFG+ +A VF +M +
Sbjct: 41 MKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPE 100
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R++ SW I GYAK G + +AL ++ +M GV+ + +T+ VLR C G+ L+RG +
Sbjct: 101 RNVVSWTAQISGYAKNGHYQDALLVFSQM-GRAGVRANQFTYGSVLRACTGLRCLERGMQ 159
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + + + ++ V +AL+ ++ KCG++ AR +F+ M +RD +SWNA+I GY
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDF 219
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+F M V PD TL SV+ AS + ++HG +I++GF + +
Sbjct: 220 NDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGS 279
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV-LPDKAVETYQMMEAEGSMP 397
LI Y + ++ M KDV+S+T +++ Y +A++ ++ M+
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D++T ++L+ CA + +L +G ++H LA++ + N L+DMY+K I+ A F
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAF 399
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+++ +KNVISWTS+I G + EA+ ++KM LKPN +T +S+L AC+ G
Sbjct: 400 YEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTG 459
Query: 517 CGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQF--NSNERDVSAWNI 569
G E + + LP A ++D++ R G+++ A+N + + + S W
Sbjct: 460 EGWECFNNM----ITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGA 515
Query: 570 LLTGYAERGQGALAE----EFFRKMIDSKGNWRKLMGLF 604
+L + G +L E R ++ N+ L G++
Sbjct: 516 ILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIY 554
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 221/458 (48%), Gaps = 36/458 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL M + ++ +++R C R + G+ +H + K ++ +
Sbjct: 116 NGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFV 175
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + + K G++ A Y+F M +RD+ SWN +IGGYA F D++ ++ M G
Sbjct: 176 QSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEG- 234
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD +T VL+ +L + ++H +I+ G+ + +D+ +LI Y K + A
Sbjct: 235 VTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSAS 294
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISASELV 311
++ M K+D IS+ A+++GY Y + L LF M+ + ++ D +T ++++ +
Sbjct: 295 ALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADI 354
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+GR++H IK S DV+ N L+ MY G E+ + F M+ K+V+SWT++I
Sbjct: 355 ASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLI 414
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
+ Y +A+ Y+ ME EG P++IT S+L AC+ G G + + + + +
Sbjct: 415 TGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNI 474
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + +ID++++ +++A + +
Sbjct: 475 LPRAEHYSCMIDLFARGGQLEEAYNMICK------------------------------- 503
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+N+KPNS +IL AC+ G + G+ H LR+
Sbjct: 504 --MNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRM 539
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+S + IL C L G IH+H +R G + L L+ YV+ G A F
Sbjct: 36 SSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVF 95
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ER+V +W ++GYA+ G A F +M
Sbjct: 96 DRMPERNVVSWTAQISGYAKNGHYQDALLVFSQM 129
>gi|302762016|ref|XP_002964430.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
gi|300168159|gb|EFJ34763.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
Length = 603
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 248/474 (52%), Gaps = 12/474 (2%)
Query: 124 TMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ H S R LGN + M+ + G + A +F + +++F+W VL+ GYA G F+ +++
Sbjct: 11 SHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYADFGEFERSVA 70
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L++ M G + YTF C L G + L++G+ VH + + + NALI+MY
Sbjct: 71 LFREML-ARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSRITAGNALISMY 129
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + A+ VFD M +R+ ++WNA+I+ Y +NG Y + L M V P+ ++
Sbjct: 130 GKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEVDGVRPNKISFM 189
Query: 303 SVISASELVGDEKL-GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ A D + R+VH + +G D+ L+KMY G E+ E VF +
Sbjct: 190 GISLAVPSFRDAFVSARQVHKRMFDLGL--DLVGYTALVKMYGRCGQVEDAEVVFEGIPW 247
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KDVV+WT M++ + + D+A E Y+ M+ EG +P++IT+ ++ AC ++
Sbjct: 248 KDVVAWTAMVTSFAQNGFSDRAFEYYRKMQLEGRVPNKITLLGIVDACDSAHRCR---EI 304
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
R S + N L+ + + ID A + F I +N++SW ++I L + +
Sbjct: 305 RTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIGKRNLVSWNAMIFALVQHQKF 364
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
E L +R++ L+ K + ++ + +L CA + L+ GK+ H H L G++ D + NAL
Sbjct: 365 EEVLDAYRQLQLDGEKADRISFIGVLDGCAMLEDLVEGKKAHRHVLEKGLSKDRMIRNAL 424
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVS--AWNILLTGYAERGQGALAEEFFRKMI 591
++MY RC ++ A F E+D++ +W+ +++ YA RG A E MI
Sbjct: 425 VNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYARRGLPDEALELLGSMI 478
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 239/493 (48%), Gaps = 36/493 (7%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R ++G +H + + + GNA +SM+ K G + A VF M +R++ +WN LI
Sbjct: 98 RMLEQGRVVHGIAREMSFSSRITAGNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALI 157
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK----RGKEVHVHVI 224
YA+ G + E L M V GV+P+ +F + VP + ++VH +
Sbjct: 158 AAYAQNGLYREIEWLLPAME-VDGVRPNKISF---MGISLAVPSFRDAFVSARQVHKRMF 213
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G D+ AL+ MY +CG + A +VF+G+P +D ++W AM++ + +NG +
Sbjct: 214 DLGL--DLVGYTALVKMYGRCGQVEDAEVVFEGIPWKDVVAWTAMVTSFAQNGFSDRAFE 271
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M+ P+ +TL ++ A + RE+ + + F D SV N L+ +
Sbjct: 272 YYRKMQLEGRVPNKITLLGIVDACD---SAHRCREIRTRMERAPFQSDTSVKNALLSRFG 328
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ ++ F + +++VSW MI ++ ++ Y+ ++ +G D I+
Sbjct: 329 RLGSIDDARDAFKSIGKRNLVSWNAMIFALVQHQKFEEVLDAYRQLQLDGEKADRISFIG 388
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VL CA L +L G K H+ + GL +I N L++MY +C ++KA +VF +I +K+
Sbjct: 389 VLDGCAMLEDLVEGKKAHRHVLEKGLSKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKD 448
Query: 465 V--ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG----ALMC 517
+ +SW+S+I EAL M+ L L P+ VT +S+LS C+ G A C
Sbjct: 449 ITQVSWSSMISAYARRGLPDEALELLGSMIQLGLDPDGVTFISLLSGCSYGGLVDEACQC 508
Query: 518 GKEI-HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ--FNSNERDVS----AWNIL 570
+ H H L+ GV ++D+ R G + A S+E+++ AW L
Sbjct: 509 FYSLEHDHGLKPGVEHQ----RIMVDVLGRAGWLDEAEKMAGMASDEKNIEGGTGAWTSL 564
Query: 571 LT-----GYAERG 578
L+ G +ERG
Sbjct: 565 LSSCRNFGDSERG 577
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 179/360 (49%), Gaps = 8/360 (2%)
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
RGK H H + G+ ++ + N L+ MY +CG + A+ +FD + ++ +W ++ GY
Sbjct: 1 RGKWGHAHALSHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYA 60
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ GE+ + + LF M + T S ++ + + GR VHG +M FS ++
Sbjct: 61 DFGEFERSVALFREMLARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSRIT 120
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI MY G+ + + VF M+ ++VV+W +I+ Y + L + ME +G
Sbjct: 121 AGNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEVDG 180
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-LIDMYSKCKCIDKA 453
P++I+ + A D + Q+ R + ++ T L+ MY +C ++ A
Sbjct: 181 VRPNKISFMGISLAVPSF--RDAFVSARQVHKRMFDLGLDLVGYTALVKMYGRCGQVEDA 238
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARI 512
VF IP K+V++WT+++ N S A ++RKM L + PN +TL+ I+ AC
Sbjct: 239 EVVFEGIPWKDVVAWTAMVTSFAQNGFSDRAFEYYRKMQLEGRVPNKITLLGIVDACD-- 296
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
A C +EI R D + NALL + R G + A + F S +R++ +WN ++
Sbjct: 297 SAHRC-REIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIGKRNLVSWNAMI 355
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ H + + G + + N L+ MY G E +K+F + K+V +WT ++ Y
Sbjct: 2 GKWGHAHALSHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYAD 61
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+++V ++ M A G +E T + L+ L L+ G +H +A S I
Sbjct: 62 FGEFERSVALFREMLARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSRITA 121
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
N LI MY KC I A VF + ++NV++W ++I N E M ++ +
Sbjct: 122 GNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEVDGV 181
Query: 496 KPNSVTLVSI-LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+PN ++ + I L+ + A + +++H +G+ G+ AL+ MY RCG+++ A
Sbjct: 182 RPNKISFMGISLAVPSFRDAFVSARQVHKRMFDLGLDLVGY--TALVKMYGRCGQVEDAE 239
Query: 555 NQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F +DV AW ++T +A+ G A E++RKM
Sbjct: 240 VVFEGIPWKDVVAWTAMVTSFAQNGFSDRAFEYYRKM 276
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 229/419 (54%), Gaps = 21/419 (5%)
Query: 153 FGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
F K D+ ++ SWN +I A+ G EAL + + +G + P +FPC +++C +
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTIKSCSALC 1156
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
DL G+ H FG+E D+ V +ALI MY KCG L AR +FD +P R+ +SW +MI+
Sbjct: 1157 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMIT 1216
Query: 272 GYFENGEYMKGLMLF--IMMREVLVDP------DFMTLSSVISASELVGDEKLGREVHGY 323
GY +N + L+LF + E V+ D + + SV+SA V + + VHG+
Sbjct: 1217 GYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 1276
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
V+K GF + V N L+ Y G +KVF ME KD +SW +MI+ Y S L +A
Sbjct: 1277 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 1336
Query: 384 VETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+E + M+ G + +T+++VL ACA G L G +H ++ L + + ++ID
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 1396
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVT 501
MY KC ++ A + F ++ +KNV SWT+++ G ++ R+ EAL IF++ + +KPN +T
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 1456
Query: 502 LVSILSACARIGALMCG-----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
VS+L+AC+ G + G H + + G+ G ++D++ R G + A+N
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG----CMVDLFGRAGCLNEAYN 1511
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 32/333 (9%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ K +++H +IR G D + LI +Y G + A L+F + +WN +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
NG + LML+ M + D T VI A LG+ VHG +IK GFS
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 332 DVSVCNPLIKMY-------------------------------LSFGNREEGEKVFSRME 360
DV V N LI Y +S G+ +E ++F +
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
SK+VVSWT MI+ Y + P++A+E ++ M+AE P+E T+ S++ AC +G L LG
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H A++ + + + LIDMYSKC I A+EVF +P K++ +W S+I L ++
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
EAL F +M +N+KP+++T + +L AC I
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 183/356 (51%), Gaps = 13/356 (3%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SWN++I+ G+ ++ L F +R++ + P + I + + D GR H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
GF D+ V + LI MY G ++ +F + ++VVSWT+MI+ Y + D A+
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228
Query: 385 -------ETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
E +E ++P D + + SVLSAC+ + + +H ++ G I +
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 1288
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LN 494
NTL+D Y+KC + +VF + +K+ ISW S+I + S EAL F M+ +
Sbjct: 1289 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 1348
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ N+VTL ++L ACA GAL GK IH +++ + ++ + +++DMY +CGR++ A
Sbjct: 1349 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 1408
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ E++V +W ++ GY G+ A + F KM+ + K N+ + + C
Sbjct: 1409 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 220/467 (47%), Gaps = 37/467 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +L G +AL+ S+++L + + ++ C L +VS
Sbjct: 1111 NSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCS---------ALCDLVSG 1161
Query: 124 TMSH---------LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
MSH + + +A + M+ K G L A +F ++ R++ SW +I GY +
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 175 GFFDEALSLYQRMFWV-------GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
D AL L++ V D VL C V + VH V++ G
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 1281
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ + V N L+ Y KCG + ++ VFD M ++D ISWN+MI+ Y ++G + L +F
Sbjct: 1282 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH 1341
Query: 288 -MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+R V V + +TLS+V+ A G + G+ +H VIKM +V V +I MY
Sbjct: 1342 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 1401
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E +K F RM+ K+V SWT M++ Y +A++ + M G P+ IT SVL
Sbjct: 1402 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 1461
Query: 407 SACACLGNLDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+AC+ G ++ G H+ + G+ Y ++D++ + C+++A + ++
Sbjct: 1462 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMK 1517
Query: 462 DK-NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
K + + W S++ R++ I +K + L P++ +LS
Sbjct: 1518 MKPDFVVWGSLLGACRIHKNVDLGEIAAQK-LFELDPDNCGYYVLLS 1563
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 166/361 (45%), Gaps = 33/361 (9%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + ++ G + +A +F ++ + F+WN++I G ++AL LY+ M
Sbjct: 61 LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV-CQ 119
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG----- 246
G+ D +TFP V++ C + GK VH +I++G+ DV V N LI Y KCG
Sbjct: 120 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 247 --------------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
DL AR +FD +P ++ +SW AMI+GY N +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF M+ + P+ T+ S+I A +G LGR +H Y IK V + LI
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALI 299
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ ++ +VF M K + +W +MI+ L +A+ + ME PD I
Sbjct: 300 DMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAI 359
Query: 401 TIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
T VL AC + N+ G ++ G+ + ++Y++ +D+A + +
Sbjct: 360 TFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKE 419
Query: 460 I 460
+
Sbjct: 420 V 420
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++H +I+ G S+D + LI +Y + G +F ++++ +W +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L ++A+ Y+ M +G D+ T V+ AC ++DLG +H ++ G + +
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 438 NTLIDMYSKC-----------------------------KCID--KALEVFHQIPDKNVI 466
N LID Y KC C D +A +F +IP KNV+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SWT++I G N + EAL F++M N+ PN T+VS++ AC +G L G+ IH +A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAE 584
++ + +L AL+DMY +CG +K A F + R + WN ++T G G A
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 585 EFFRKM--IDSKGNWRKLMGLFRKC 607
F +M ++ K + +G+ C
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCAC 368
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 265/539 (49%), Gaps = 17/539 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L+E +G LK M E ++ D+ + ++ G +H + K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + N+ ++M+ K G A VF M +RDL SWN +I G A+ G EA+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ ++ G+KPD YT VL+ +P+ L K+VHVH I+ +D V ALI Y
Sbjct: 404 FMQLLRC-GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ + A ++F+ D ++WNAM++GY ++ + K L LF +M + D TL+
Sbjct: 463 SRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+V + G++VH Y IK G+ D+ V + ++ MY+ G+ + F +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 363 DVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D V+WTTMIS C E ++A + M G +PDE TIA++ A +CL L+ G ++
Sbjct: 582 DDVAWTTMISGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A++ + + +L+DMY+KC ID A +F +I N+ +W ++++GL +
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--- 537
E L F++M L +KP+ VT + +LSAC+ G + E + H + + G P
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV---SEAYKHMRSMHGDY-GIKPEIE 756
Query: 538 --NALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+ L D R G +K A N S + SA + LL +G + K+++
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 40/466 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-----FFDEALSLYQR 186
L N +SM+ K G L +A VF KM DRDL SWN ++ YA++ +A L+ R
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-R 134
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ V T +L+ C + + H + + G + D V AL+ +Y+K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ +++F+ MP RD + WN M+ Y E G + + L ++P+ +TL +
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-- 252
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ + GD+ +V + +D S + +I F N+ E + S
Sbjct: 253 -ARISGDDSDAGQVKSF----ANGNDASSVSEII-----FRNKGLSEYLHSG-------Q 295
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
++ ++ C+ V D VE D++T +L+ + +L LG ++H +A+
Sbjct: 296 YSALLKCFADMVESD--VEC-----------DQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL + ++N+LI+MY K + A VF + ++++ISW S+I G+ N EA+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F +++ LKP+ T+ S+L A + + L K++H HA++I D F+ AL+D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 545 VRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R MK A F + D+ AWN ++ GY + G + F M
Sbjct: 463 SRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 39/382 (10%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
LR DL GK H ++ F + ++N LI+MY KCG L AR VFD MP RD
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 264 ISWNAMISGYFENGE-----YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+SWN++++ Y ++ E + +LF ++R+ +V MTLS ++ G
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
HGY K+G D V L+ +YL FG +EG+ +F M +DVV W M+ Y
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLISYIIIA 437
++A++ + G P+EIT+ L A + D G +K +S II
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLR--LLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
N + Y L+ F + + +V +
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDV------------------------------EC 313
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ VT + +L+ ++ +L G+++H AL++G+ + N+L++MY + + A F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 558 -NSNERDVSAWNILLTGYAERG 578
N +ERD+ +WN ++ G A+ G
Sbjct: 374 DNMSERDLISWNSVIAGIAQNG 395
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
LM GK HA L + FL N L+ MY +CG + A F+ +RD+ +WN +L
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 574 YAERGQ 579
YA+ +
Sbjct: 115 YAQSSE 120
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 287/645 (44%), Gaps = 88/645 (13%)
Query: 10 SQTPLRQNLRNPKTRIPETSFYFKP--KTRHFSSKNAQSVQV-LNTQNTSSI--ATKNPN 64
S L QN + F KP KT+ FS + + + ++ T +I + N
Sbjct: 11 SPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYN 70
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK- 123
+++ C G LE A++ + Q+ + + ++++LC + + +G +HS++
Sbjct: 71 AKILHFCQLGDLENAMELICMCQKSEL--ETKTYGSVLQLCAGLKSFTDGKKVHSIIKSN 128
Query: 124 ------------------------------TMSHLSVRLGNAFLSMFVKFGDLGH----- 148
TM +V L N +S + K GD
Sbjct: 129 SVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 149 ---------------AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A+ +F K+CDRD+ SWN +I GY G + L +Y++M ++G +
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-I 247
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D+ T VL C L GK VH I+ +E ++ N L+ MY KCGDL A
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M +R+ +SW +MI+GY +G + L M + V D + ++S++ A G
Sbjct: 308 VFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGS 367
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G++VH Y+ ++ VCN L+ MY G+ E VFS M KD++SW TMI
Sbjct: 368 LDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE 427
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ PD T+A VL ACA L L+ G ++H +R G S
Sbjct: 428 LK---------------------PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSD 466
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+AN L+D+Y KC + A +F IP K+++SWT +I G ++ EA+ F +M
Sbjct: 467 RHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD 526
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++P+ V+ +SIL AC+ G L G I + I + + ++D+ R G
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA--CMVDLLSRTGN 584
Query: 550 MKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ + D + W LL G LAE+ ++ +
Sbjct: 585 LSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFE 629
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 223/488 (45%), Gaps = 75/488 (15%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D + +N I + + G + A+ L + + + T+ VL+ C G+ GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL---ICMCQKSELETKTYGSVLQLCAGLKSFTDGK 119
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK----------------- 260
+VH + D + L++ Y CGDL R VFD M K
Sbjct: 120 KVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 261 ----------------------------------RDRISWNAMISGYFENGEYMKGLMLF 286
RD ISWN+MISGY NG +GL ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + +D D T+ SV+ G LG+ VH IK F ++ N L+ MY
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ + +VF +M ++VVSWT+MI+ Y D A++ Q ME EG D + I S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA G+LD G +H + S + + N L+DMY+KC ++ A VF + K++I
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDII 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
SW + M+ LKP+S T+ +L ACA + AL GKEIH + L
Sbjct: 420 SWNT--------------------MIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R G + D + NAL+D+YV+CG + A F+ +D+ +W +++ GY G G A
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 586 FFRKMIDS 593
F +M D+
Sbjct: 520 TFNEMRDA 527
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 211/450 (46%), Gaps = 33/450 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG E+ L M L I VD +++++ C G +HS+ K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N L M+ K GDL A VF KM +R++ SW +I GY + G D A+ L
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q+M GVK DV +L C L GK+VH ++ E+++ V NAL+ MY
Sbjct: 340 LQQM-EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF M +D ISWN MI GE + PD T++
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMI------GE---------------LKPDSRTMAC 437
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + G+E+HGY+++ G+S D V N L+ +Y+ G +F + SKD
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG----- 418
+VSWT MI+ Y ++A+ T+ M G PDE++ S+L AC+ G L+ G
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
I + + L Y ++D+ S+ + KA E +P + W +++ G R
Sbjct: 558 IMKNDFNIEPKLEHYA----CMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCR- 612
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
N E + + L+P + +L+
Sbjct: 613 NYHDIELAEKVAERVFELEPENTGYYVLLA 642
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 240/437 (54%), Gaps = 9/437 (2%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M DRD+ SWN LI G ++ G+ +AL ++ ++ G P T ++ +CG + +
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLR-EGFSPLQTTLVGLVPSCGRREFVFQ 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ +H I+ G + D V NAL MY K GDL A L+F+ + + +SWN MI Y
Sbjct: 60 GRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAG 119
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NG + + +++F M E V+ + +T+ S++ A+ + E +H Y IK G ++ SV
Sbjct: 120 NGFFNESMLVFKRMVEQKVEVNPVTIMSLLPAN--ISPEL----IHCYAIKTGLINNGSV 173
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ +Y G+ E E ++ K++VS T +IS Y D VE + M+
Sbjct: 174 VTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDM 233
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D + + S+L ++ +GI LH A++ GL ++ +++N LI MY K I+ A+
Sbjct: 234 KLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAIS 293
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGA 514
+F+++P+K +ISW S+I G R+ +A+ FF +M M L P+++T+ S+L+ C+++G
Sbjct: 294 LFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGY 353
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L G+ +H + LR + + F+ +L+DMY +CG + A F S E V+ WN +++G
Sbjct: 354 LRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISG 413
Query: 574 YAERGQGALAEEFFRKM 590
Y+ G A + KM
Sbjct: 414 YSWYGLEHNALNCYSKM 430
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 244/505 (48%), Gaps = 21/505 (4%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
+ LV LV C + +G +H KT L ++ NA M+ K GDL A +F
Sbjct: 41 QTTLVGLVPSCGRREFVFQGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFE 100
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
++ D+ + SWN +IG YA GFF+E++ +++RM V+ V P + + +P
Sbjct: 101 ELEDKSVVSWNTMIGAYAGNGFFNESMLVFKRM-----VEQKVEVNPVTIMSL--LPANI 153
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+ +H + I+ G + VV +L+ +Y KCG A L++ P+++ +S A+IS Y
Sbjct: 154 SPELIHCYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYA 213
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
E G + F M+++ + D + + S++ +G +HGY +K G
Sbjct: 214 EKGNMDLVVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNL 273
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAE 393
V N LI MY F + E +F M K ++SW ++IS C + D A++ + M+
Sbjct: 274 VSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASD-AMKFFCQMKMF 332
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G PD IT+AS+L+ C+ LG L LG +LH +R L + +LIDMY+KC I A
Sbjct: 333 GLSPDTITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLA 392
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
VF I + V +W ++I G AL + KM L+P+ +T + +L+AC
Sbjct: 393 ERVFKSIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHG 452
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPA--WNQFNSNERDVS 565
G L GK+ +I G +PN ++ + R G + A + + +E D +
Sbjct: 453 GLLHEGKK----HFQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSA 508
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
W LL + L E +K+
Sbjct: 509 VWGALLNACCIHQEIKLGECLAKKL 533
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 239/464 (51%), Gaps = 14/464 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L + G L A VF ++ D ++N LI Y+ G F A+ LY+ M V P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR-VAPN 99
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTFP VL+ C + DL+ G+ +H H G D+ V ALI +Y++C AR VF
Sbjct: 100 KYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLM-LFIMMREVLVDPDFMTLSSVISASELVGDEK 315
MP RD ++WNAM++GY +G Y + L M + P+ TL S++ G
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219
Query: 316 LGREVHGYVIKMGF---SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G +H Y ++ + V + L+ MY +VF M ++ V+W+ +I
Sbjct: 220 QGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIG 279
Query: 373 CYEGSVLPDKAVETYQM---MEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
G VL D+ E + + M EG ++AS L CA L +L +G +LH L ++
Sbjct: 280 ---GFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G+ + + +N+L+ MY+K I++A F +I K+ IS+ +++ G N ++ EA + F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM N++P+ T+VS++ AC+ + AL GK H + G+A + + N+L+DMY +C
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC 456
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
G++ + F+ RDV +WN ++ GY G G A F M
Sbjct: 457 GKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGM 500
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 224/460 (48%), Gaps = 22/460 (4%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H + + A + ++++ G A VF KM RD+ +WN ++ GYA G + A++
Sbjct: 132 HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLD 191
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV---NALITMYV 243
M GG++P+ T +L L +G +H + +R E + + V AL+ MY
Sbjct: 192 MQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYA 251
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-DFMTLS 302
KC LV A VF GMP R+ ++W+A+I G+ + LF +++LV+ F++ +
Sbjct: 252 KCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLF---KDMLVEGLCFLSAT 308
Query: 303 SVISASEL---VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV SA + + D +G ++H + K G D++ N L+ MY G E F +
Sbjct: 309 SVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEI 368
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
KD +S+ ++S + ++A ++ M+A PD T+ S++ AC+ L L G
Sbjct: 369 AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
H + GL I N+LIDMY+KC ID + +VF ++P ++V+SW ++I G ++
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA F M P+ VT + +++AC+ G + GK H G LP
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK----HWFDTMTHKYGILPR 544
Query: 539 -----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++D+ R G + A+ S + DV W LL
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 226/458 (49%), Gaps = 11/458 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ L +G A+ +L MQ+ + + LV+L+ L +G +H+
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229
Query: 123 KT---MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ + V +G A L M+ K L +A VF M R+ +W+ LIGG+ E
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A +L++ M G + LR C + DL G ++H + + G AD+ N+L+
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
+MY K G + A + FD + +D IS+ A++SG +NG+ + ++F M+ ++PD
Sbjct: 350 SMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I A + + G+ HG VI G + + S+CN LI MY G + +VF +M
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++DVVSW TMI+ Y L +A + M+ +G PD++T +++AC+ G + G
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529
Query: 420 K-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRL 477
+ + G++ + ++D+ ++ +D+A + +P K +V W +++ R+
Sbjct: 530 HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRI 589
Query: 478 NNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+++ + +++ L P N V L +I SA R
Sbjct: 590 -HKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGR 626
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 224/426 (52%), Gaps = 13/426 (3%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RD S+N ++ D+AL+ RM G V+PD TF L G + + ++
Sbjct: 122 RDTSSYNTILSATPDP---DDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQ 178
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H V R G ADV V NAL+T Y + L AR VF+ MP RD +SWNA++ G ++GE
Sbjct: 179 LHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGE 238
Query: 279 -YMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + +F+ M++ V PD +++ SVISA G +LGR++HG+ +K+G VS+
Sbjct: 239 CPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIA 298
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY G ++F M +DVVSWTT++S + AV + M +G
Sbjct: 299 NVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDR-----EDAVSLFNGMMRDGVA 353
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P+E+T ++LSA G +H + ++TGL AN+ I MY+K + +D A +
Sbjct: 354 PNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMI 413
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG--A 514
F +P VI+W ++I G N +AL F M+ KP+ T SILSA + +
Sbjct: 414 FGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKITKPSETTFASILSAVTAVETVS 473
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTG 573
+ G+ H L++G+ ++ AL+D+Y + G ++ +W F R + AW +++
Sbjct: 474 MAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISA 533
Query: 574 YAERGQ 579
++ G
Sbjct: 534 NSKHGN 539
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 246/515 (47%), Gaps = 32/515 (6%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH++VS+ V +GNA ++ + + L A VF +M RDL SWN L+ G A+ G
Sbjct: 179 LHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGE 238
Query: 177 FD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
E + ++ RM GGV+PD + V+ CGG L+ G+++H ++ G E V +
Sbjct: 239 CPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIA 298
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N L+ MY KCG AR +F+ M +RD +SW ++S E+ + LF M V
Sbjct: 299 NVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDRED-----AVSLFNGMMRDGVA 353
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ +T +++SA + G+ VH IK G SD + N I MY ++ + +
Sbjct: 354 PNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMI 413
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F M +V++W +IS Y + + A+E + M + + P E T AS+LSA + +
Sbjct: 414 FGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSM-VKITKPSETTFASILSAVTAVETV 472
Query: 416 DL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ G H ++ GL + ++ LID+Y+K ++++ + F + +++I+WT+II
Sbjct: 473 SMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIIS 532
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHALRIGVA 531
+ + F M + + P+ V L+S+L+AC G G+EI + A + G
Sbjct: 533 ANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKHGAE 592
Query: 532 FDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILL--------TGYAERGQG 580
++DM R GR++ A Q S VSA LL T ER G
Sbjct: 593 LWPEHYACVVDMLGRAGRLEEAEELMLQMPSGP-SVSAMQSLLGACRIHGNTDVGERVAG 651
Query: 581 ALAEE---------FFRKMIDSKGNWRKLMGLFRK 606
L E + KG+W + + RK
Sbjct: 652 VLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRK 686
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 188/377 (49%), Gaps = 11/377 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + G A V N+L Y K A VF P RD S+N ++S + +
Sbjct: 80 LHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSATPDPDD 139
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ M+R V PD +T + +S + G+ +L R++H V + G + DV V N
Sbjct: 140 ALA--FAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGIAADVFVGNA 197
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-SCYEGSVLPDKAVETY-QMMEAEGSM 396
L+ Y + + KVF M ++D+VSW ++ + P + + + +M++ G
Sbjct: 198 LVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHGGVR 257
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD I++ SV+SAC G L+LG ++H A++ G+ ++ IAN L+ MY KC A +
Sbjct: 258 PDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRL 317
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F + +++V+SWT++ ++ +A+ F MM + + PN VT V+ILSA
Sbjct: 318 FEFMGERDVVSWTTV-----MSMDREDAVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPA 372
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGY 574
G+ +HA ++ G++ N+ + MY + RM A F +V AWN L++GY
Sbjct: 373 REGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGY 432
Query: 575 AERGQGALAEEFFRKMI 591
A+ A E F M+
Sbjct: 433 AQNEMCQDALEAFLSMV 449
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 10/396 (2%)
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
+L ++ + D ++ +++ C + + G +H K V + N ++M+
Sbjct: 247 FLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYY 306
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
K G G A +F M +RD+ SW ++ + ++A+SL+ M GV P+ TF
Sbjct: 307 KCGTPGCARRLFEFMGERDVVSWTTVM-----SMDREDAVSLFNGMMR-DGVAPNEVTFV 360
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+L G + G+ VH I+ G N+ ITMY K + A+++F MP
Sbjct: 361 AILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHP 420
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GRE 319
+ I+WNA+ISGY +N L F+ M ++ P T +S++SA V + G+
Sbjct: 421 EVIAWNALISGYAQNEMCQDALEAFLSMVKI-TKPSETTFASILSAVTAVETVSMAYGQM 479
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
H +K+G V LI +Y G+ EE K F + +++WT +IS
Sbjct: 480 YHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGN 539
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIAN 438
D V + M G PD + + SVL+AC G LG ++ + +A + G +
Sbjct: 540 YDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKHGAELWPEHYA 599
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
++DM + +++A E+ Q+P +S +LG
Sbjct: 600 CVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLG 635
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 149/370 (40%), Gaps = 46/370 (12%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E A+ + M + +E V ++ EG +H+V KT N+F
Sbjct: 338 EDAVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSF 397
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K + A +FG M ++ +WN LI GYA+ +AL + M + KP
Sbjct: 398 ITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKI--TKPS 455
Query: 197 VYTFPCVLRTCGGVP--DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
TF +L V + G+ H ++ G A V ALI +Y K G L +
Sbjct: 456 ETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKA 515
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F R I+W A+IS ++G Y + LF M V PD + L SV++A G
Sbjct: 516 FGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFA 575
Query: 315 KLGREV-HGYVIKMGFS--DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
LGRE+ K G + C ++ M G EE E++ +M S VS
Sbjct: 576 SLGREIFESMATKHGAELWPEHYAC--VVDMLGRAGRLEEAEELMLQMPSGPSVS----- 628
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ S+L AC GN D+G ++ + + T
Sbjct: 629 -----------------------------AMQSLLGACRIHGNTDVGERVAGVLLETEPT 659
Query: 432 ---SYIIIAN 438
+Y++++N
Sbjct: 660 ESGAYVLLSN 669
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+ SA D LH LA+ +GL ++ + N+L Y+K A VF P +
Sbjct: 63 TAFSAAVARSGPDALPALHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSR 122
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEI 521
+ S+ +I L +AL F +M+ +++P+++T LS A G +++
Sbjct: 123 DTSSYNTI---LSATPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQL 179
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
HA R G+A D F+ NAL+ Y R + A F RD+ +WN L+ G A+ G+
Sbjct: 180 HALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGE 238
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 240/476 (50%), Gaps = 39/476 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N LS + K L VF M RD+ SWN LI YA GF +++ Y M + G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ +L + G +VH HV++FG+++ V V + L+ MY K G + AR
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 254 VFDGMPKR-------------------------------DRISWNAMISGYFENGEYMKG 282
FD MP++ D ISW AMI+G+ +NG +
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ LF MR ++ D T SV++A V + G++VH Y+I+ + D++ V + L+ M
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + + E VF +M K+VVSWT M+ Y + ++AV+ + M+ G PD+ T+
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SV+S+CA L +L+ G + H A+ +GLIS+I ++N L+ +Y KC I+ + +F ++
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+ +SWT+++ G ++ E L F M+ + KP+ VT + +LSAC+R G + G +I
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498
Query: 522 HAHAL---RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
+ RI D + ++D++ R GR++ A N D W LL+
Sbjct: 499 FESMIKEHRIIPIEDHY--TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 65/450 (14%)
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR----- 261
C + + K++H H+I+ ++ ++N L++ Y K + AR VFD MP+R
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 262 --------------------------DRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
D +SWN++IS Y G ++ + + +M+
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY----LSFGNR- 349
+ + + LS+++ + G LG +VHG+V+K GF V V +PL+ MY L F R
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 350 --------------------------EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
E+ ++F M+ KD +SWT MI+ + + L +A
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ ++ M E D+ T SVL+AC + L G ++H +RT I + + L+DM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
Y KCK I A VF ++ KNV+SWT++++G N S EA+ F M N ++P+ TL
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
S++S+CA + +L G + H AL G+ + NAL+ +Y +CG ++ + F+ +
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D +W L++GYA+ G+ F M+
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESML 468
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 207/386 (53%), Gaps = 4/386 (1%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M +V + N ++ ++ + + +F M ++D SW +I G+ + G EA+ L+
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
+ M + ++ D YTF VL CGGV L+ GK+VH ++IR Y+ ++ V +AL+ MY K
Sbjct: 263 REM-RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK 321
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
C + A VF M ++ +SW AM+ GY +NG + + +F M+ ++PD TL SV
Sbjct: 322 CKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSV 381
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
IS+ + + G + H + G ++V N L+ +Y G+ E+ ++FS M D
Sbjct: 382 ISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDE 441
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSWT ++S Y ++ + ++ M A G PD++T VLSAC+ G + G ++ +
Sbjct: 442 VSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFES 501
Query: 425 AMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSF 482
++ I I T +ID++S+ +++A + +++P + I W S++ R +R+
Sbjct: 502 MIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRF-HRNM 560
Query: 483 EALIFFRKMMLNLKPNSVTLVSILSA 508
E + + +L L+P++ +LS+
Sbjct: 561 EIGKWAAESLLKLEPHNTASYILLSS 586
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 148/294 (50%), Gaps = 37/294 (12%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ Y E E+VF M ++D+VSW ++IS Y G ++V+ Y +M G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 397 P-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+ I ++++L + G + LG+++H ++ G SY+ + + L+DMYSK + A +
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 456 VFHQIPDKNV-------------------------------ISWTSIILGLRLNNRSFEA 484
F ++P+KNV ISWT++I G N EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 485 LIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FR+M L NL+ + T S+L+AC + AL GK++HA+ +R + F+ +AL+DM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
Y +C +K A F N ++V +W +L GY GQ +EE + D + N
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGY---GQNGYSEEAVKIFCDMQNN 369
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 7/304 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +A+ M+ N+ +D+ +++ C EG +H+ + +T ++ +
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A + M+ K + A VF KM +++ SW ++ GY + G+ +EA+ ++ M G
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QNNG 370
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++PD +T V+ +C + L+ G + H + G + + V NAL+T+Y KCG + +
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F M D +SW A++SGY + G+ + L LF M PD +T V+SA G
Sbjct: 431 RLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAG 490
Query: 313 DEKLGREVHGYVIK---MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWT 368
+ G ++ +IK + +D C +I ++ G EE K ++M S D + W
Sbjct: 491 LVQKGNQIFESMIKEHRIIPIEDHYTC--MIDLFSRAGRLEEARKFINKMPFSPDAIGWA 548
Query: 369 TMIS 372
+++S
Sbjct: 549 SLLS 552
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 245/495 (49%), Gaps = 42/495 (8%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F + F L +A VF + + +L WN + G+A + AL LY M +G + P
Sbjct: 43 FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LLP 101
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ YTFP +L++C + G+++H HV++ GY+ D+ V +LI+MYV+ G L AR VF
Sbjct: 102 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 161
Query: 256 DG-------------------------------MPKRDRISWNAMISGYFENGEYMKGLM 284
D +P +D +SWNAMISGY E G + L
Sbjct: 162 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 221
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF M + V PD T+ SV+SA +LGR+VH ++ GF ++ + N LI +Y+
Sbjct: 222 LFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI 281
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G E +F + KDV+SW T+I Y L +A+ +Q M G P+++T+ S
Sbjct: 282 KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 341
Query: 405 VLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+L ACA LG +++G +H + G+ + +LIDMY+KC I+ A +VF I +
Sbjct: 342 ILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN 401
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+++ SW ++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 402 RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461
Query: 522 H---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAE 576
+I + + ++D+ G K A N+ E D W LL
Sbjct: 462 FRSMKEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 519
Query: 577 RGQGALAEEFFRKMI 591
L E + + +I
Sbjct: 520 YANVELGESYAQNLI 534
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 34/351 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + + EG +H V K L + + + +SM+V+ G L A VF + RD
Sbjct: 109 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 168
Query: 161 LFSWNVLIGGYAKAGF-------FD------------------------EALSLYQRMFW 189
+ S+ LI GYA G+ FD EAL L++ M
Sbjct: 169 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 228
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V+PD T V+ C ++ G++VH + G+ +++ +VNALI +Y+KCG++
Sbjct: 229 T-NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVE 287
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F+G+ +D ISWN +I GY Y + L+LF M P+ +T+ S++ A
Sbjct: 288 TACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACA 347
Query: 310 LVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+G ++GR +H Y+ K G ++ S LI MY G+ E ++VF + ++ + SW
Sbjct: 348 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 407
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
MI + + A + + M PD+IT +LSAC+ G LDLG
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 458
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 165/357 (46%), Gaps = 36/357 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V++V C + G +HS +
Sbjct: 204 NAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDD 263
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + +++K G++ A +F + +D+ SWN LIGGY + EAL L
Sbjct: 264 HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 323
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G P+ T +L C + ++ G+ +HV++ + G +LI M
Sbjct: 324 FQEML-RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 382
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A+ VFD + R SWNAMI G+ +G +F MR+ ++PD +T
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 442
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + +E K+ ++E
Sbjct: 443 VGLLSACSHSGMLDLGRHI-------------------------FRSMKEDYKITPKLE- 476
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ MI S L +A E ME E PD + S+L AC N++LG
Sbjct: 477 ----HYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMYANVELG 526
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 36/312 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + LI+ + F VF ++ +++ W TM +
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S P A+ Y M + G +P+ T +L +CA G ++H ++ G +
Sbjct: 79 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQ-------------------------------IPDK 463
+ +LI MY + ++ A +VF Q IP K
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW ++I G + EAL F++MM N++P+ T+VS++SACA+ ++ G+++H
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G + + NAL+D+Y++CG ++ A F + +DV +WN L+ GY
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318
Query: 582 LAEEFFRKMIDS 593
A F++M+ S
Sbjct: 319 EALLLFQEMLRS 330
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 259/496 (52%), Gaps = 21/496 (4%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLSV--RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
++ +G LH+ + K + +LS L N + + K G L A VF + +++ S+N
Sbjct: 20 QKSLKKGQILHAHIIK-IPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYN 78
Query: 166 VLIGGYAKAGFFDE--ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-----KE 218
LI G + G L L++RM + PD +TFP V L G ++
Sbjct: 79 CLIHGLSHNGSKGSNFVLELFRRMI-ANNILPDAHTFPGVFTAAA----LNLGCNFDARQ 133
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VHV I+ DV V ++L+ Y K G + AR +FD MP+R+ +SW MISGY
Sbjct: 134 VHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQM 193
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVC 336
+ L +F +MR V + + +SV+SA LV E + G++VH V+K G + VSV
Sbjct: 194 AKEALGVFGLMRLVEGNLNEFVFTSVLSA--LVCPEFVDSGKQVHCVVVKNGVLEFVSVL 251
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY GN +F K+ ++W+ +I+ Y + KA++ + M G +
Sbjct: 252 NALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFV 311
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P E T+ VL AC+ + ++ G + H +++G + I A L+DMY+K A +
Sbjct: 312 PSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKG 371
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGAL 515
F + + +++ WTSII G N ++ EAL + +M M + PN +T+ S+L AC+ + AL
Sbjct: 372 FDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAAL 431
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGY 574
GK+IHA ++ G+ + + +AL MY +CG ++ F +RD+ +WN +++G
Sbjct: 432 EQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGL 491
Query: 575 AERGQGALAEEFFRKM 590
++ G G A E F +M
Sbjct: 492 SQNGHGREALELFEEM 507
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 244/465 (52%), Gaps = 17/465 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H + KT S V +G++ ++ + K G + A +F +M +R+L SW +I GYA
Sbjct: 134 VHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQM 193
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL ++ M V G + + F VL + GK+VH V++ G V V+N
Sbjct: 194 AKEALGVFGLMRLVEG-NLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLN 252
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+TMY KCG+L + ++F+ ++ I+W+A+I+GY + G+ K L LF M P
Sbjct: 253 ALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVP 312
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
TL V+ A V + G++ HGY++K G+ + L+ MY FG + K F
Sbjct: 313 SEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGF 372
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ D+V WT++I+ Y + ++A+ Y M+ +P+E+T+ASVL AC+ L L+
Sbjct: 373 DFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALE 432
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H ++ GL + I + L MY+KC +++ + +F ++ ++++SW ++I GL
Sbjct: 433 QGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLS 492
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N EAL F +M L KP+ +T V++LSAC+ +G + G + FD F
Sbjct: 493 QNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY------FNMMFDEF 546
Query: 536 --LPNA-----LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
+P ++D+ R G++ A S + + W ILL
Sbjct: 547 CLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILL 591
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 250/510 (49%), Gaps = 43/510 (8%)
Query: 43 NAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNIC---------- 92
+A+ V VL + S +S +N C G + +A K D M E N+
Sbjct: 130 DARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYA 189
Query: 93 ---VDEDAL--VNLVRLCEWKRG----------------YDEGLYLHSVVSKTMSHLSVR 131
+ ++AL L+RL E D G +H VV K V
Sbjct: 190 SKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVS 249
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ NA ++M+ K G+L ++ +F D++ +W+ LI GY++AG +AL L+ +M + G
Sbjct: 250 VLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAG 309
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V P +T VL+ C V ++ GK+ H ++++ GYE + AL+ MY K G A
Sbjct: 310 FV-PSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDA 368
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISASE 309
R FD + + D + W ++I+GY +NG+ + L ++ + MR++L P+ +T++SV+ A
Sbjct: 369 RKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKIL--PNELTMASVLKACS 426
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G+++H IK G ++S+ + L MY G+ EEG +F RM +D+VSW
Sbjct: 427 NLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNA 486
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM-RT 428
MIS + +A+E ++ M EG+ PD IT +VLSAC+ +G + G +
Sbjct: 487 MISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEF 546
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQ-IPDKNVISWTSIILGLRLNNRSFEALIF 487
L+ + ++D+ S+ +++A E I D + W ++ R N+ ++E +
Sbjct: 547 CLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACR-NHCNYELGAY 605
Query: 488 FRKMMLNLKPNS----VTLVSILSACARIG 513
+ ++ L V L SI +A R+
Sbjct: 606 AGEKLMELGSRESSAYVLLSSIYTAMGRLA 635
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR--SFEALIFFRKMML 493
+AN LI Y+KC + A VF + KNV+S+ +I GL N S L FR+M+
Sbjct: 45 LANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIA 104
Query: 494 N-LKPNSVTLVSILSACA-RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
N + P++ T + +A A +G +++H ++ D F+ ++L++ Y + G +
Sbjct: 105 NNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVF 164
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
A F+ ER++ +W +++GYA + A F M +GN
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGN 210
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 260/523 (49%), Gaps = 12/523 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY-LHSVVSKTMSHLSVRL 132
G ++A+++ M E + +LV C+ EG + +H+ V K V +
Sbjct: 37 GWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFV 96
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L + FG + VF ++ + ++ SW L+ GYA G E +S+Y+R+ G
Sbjct: 97 GTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLR-RDG 155
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + V+R+CG + D G +V VI+ G + V V N+LI+M+ C + A
Sbjct: 156 VYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEAS 215
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD ISWN++I+ NG K L F MR D++T+S+++
Sbjct: 216 CVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQ 275
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ + GR +HG V+K G +V VCN L+ MY G E+ E VF +M +D++SW +M++
Sbjct: 276 NLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMA 335
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + +A+E M + +T + LSAC L L + +H + GL
Sbjct: 336 SHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHH 392
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN---NRSFEALIFFR 489
+II N L+ MY K + A V +PD++ ++W ++I G N N + EA R
Sbjct: 393 NLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLR 452
Query: 490 KMMLNLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ + N +T+V++LSA L+ G IHAH + G + F+ ++L+ MY +CG
Sbjct: 453 EE--GVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCG 510
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + F+ ++ S WN +L+ A G G A + KM
Sbjct: 511 DLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKM 553
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 265/527 (50%), Gaps = 15/527 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +++ + ++ + +E+A+ ++R C G + V K+ +V +
Sbjct: 138 NGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSV 197
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ +SMF + A VF M +RD SWN +I G +++L + +M +
Sbjct: 198 ANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHA 257
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
K D T +L CG +L+ G+ +H V++ G E++V V N+L++MY + G A
Sbjct: 258 -KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAE 316
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF M +RD ISWN+M++ + +NG Y + L L I M + +++T ++ +SA +
Sbjct: 317 FVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLE 376
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K+ VH +VI +G ++ + N L+ MY FG+ ++V M +D V+W +I
Sbjct: 377 TLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIG 433
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRTGLI 431
+ + P+ A+E + ++ EG + ITI ++LSA +L D G+ +H + G
Sbjct: 434 GHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFE 493
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ ++LI MY++C ++ + +F + +KN +W +I+ EAL K+
Sbjct: 494 LETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEAL----KL 549
Query: 492 MLNLKPNSVTL--VSILSACARIGALMC---GKEIHAHALRIGVAFDGFLPNALLDMYVR 546
++ ++ + + L S A A IG L G+++H+ ++ G + ++ NA +DMY +
Sbjct: 550 IIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGK 609
Query: 547 CGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
CG + + R +WNIL++ A G A E F +M+D
Sbjct: 610 CGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLD 656
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 236/452 (52%), Gaps = 7/452 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ KFG + HA +VF KM +R+ SWN L+ G+ + G++ +A+ + M GV+P Y
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHML-EHGVRPSSY 59
Query: 199 TFPCVLRTCGGVPDLKRGK-EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
++ C + G +VH HVI+ G DV V +L+ Y G + +VF
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + + +SW +++ GY NG + + ++ +R V + +++VI + ++ D+ LG
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+V G VIK G VSV N LI M+ + + EE VF M+ +D +SW ++I+ +
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+K++E + M + D ITI+++L C NL G LH + +++GL S + +
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
N+L+ MYS+ + A VFH++ ++++ISW S++ N AL +M+ K
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359
Query: 498 -NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT + LSAC + L K +HA + +G+ + + NAL+ MY + G M A
Sbjct: 360 TNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRV 416
Query: 557 FN-SNERDVSAWNILLTGYAERGQGALAEEFF 587
+RD WN L+ G+A+ + A E F
Sbjct: 417 CKIMPDRDEVTWNALIGGHADNKEPNAAIEAF 448
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 240/499 (48%), Gaps = 9/499 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG E++L+Y M+ + D + L+ +C + G LH +V K
Sbjct: 230 NSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVK 289
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V + N+ LSM+ + G A +VF KM +RDL SWN ++ + G + AL L
Sbjct: 290 SGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALEL 349
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
M V TF L C + LK VH VI G ++ + NAL+TMY
Sbjct: 350 LIEMLQTRKATNYV-TFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYG 405
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K G + A+ V MP RD ++WNA+I G+ +N E + F ++RE V +++T+ +
Sbjct: 406 KFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVN 465
Query: 304 VISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA L D+ L G +H +++ GF + V + LI MY G+ +F + +
Sbjct: 466 LLSAF-LSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLAN 524
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K+ +W ++S ++A++ M +G D+ + + + L LD G +L
Sbjct: 525 KNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQL 584
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H L ++ G S + N +DMY KC ID + Q ++ SW +I L +
Sbjct: 585 HSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFF 644
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNA 539
+A F +M+ L L+P+ VT VS+LSAC+ G + G + + + GV
Sbjct: 645 QQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVC 704
Query: 540 LLDMYVRCGRMKPAWNQFN 558
++D+ R G++ A N N
Sbjct: 705 IIDLLGRAGKLTEAENFIN 723
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 191/357 (53%), Gaps = 3/357 (0%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY K G + A+ VFD MP+R+ SWN ++SG+ G Y K + F M E V P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 301 LSSVISASELVGDEKLGR-EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+S+++A + G G +VH +VIK G + DV V L+ Y +FG E + VF +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
E ++VSWT+++ Y + + + Y+ + +G +E +A+V+ +C L + LG
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++ +++GL + + +AN+LI M+ C I++A VF + +++ ISW SII N
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
++L +F +M + K + +T+ ++L C L G+ +H ++ G+ + + N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+LL MY + G+ + A F+ ERD+ +WN ++ + + G A E +M+ ++
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357
>gi|359490688|ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 237/408 (58%), Gaps = 9/408 (2%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
PD+ T+ +L++C + + GK VH +++ G E D V+N LI++Y KCGD ARL+
Sbjct: 73 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 132
Query: 255 FDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F+GM KRD +SW+AM+S + N ++ + F+ M E+ P+ ++VI A
Sbjct: 133 FEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVIRACSNANH 192
Query: 314 EKLGREVHGYVIKMGFSD-DVSVCNPLIKMYL-SFGNREEGEKVFSRMESKDVVSWTTMI 371
+G ++G+V+K G+ + DV V LI M++ G+ KVF +M +++V+WT MI
Sbjct: 193 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 252
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + A++ + ME G +PD T +SVLSAC LG L LG +LH +R GL
Sbjct: 253 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 312
Query: 432 SYIIIANTLIDMYSKCKC---IDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIF 487
+ + +L+DMY+KC +D + +VF ++P+ NV+SWT+II ++ EA+
Sbjct: 313 LDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDKEAIEL 372
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F KM+ ++ PN + S+L AC + G++++++A+++G+A + N+L+ MY R
Sbjct: 373 FCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYAR 432
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
GRM+ A F+ E+++ ++N ++ GYA+ + A F ++ D+
Sbjct: 433 SGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 480
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 227/475 (47%), Gaps = 48/475 (10%)
Query: 56 SSIATKNPN-----SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG 110
SS++ KNPN +RL G L A LD M + N D L++ C R
Sbjct: 31 SSLSLKNPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRN 90
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIG 169
+ G +H + ++ L + N +S++ K GD A +F M + RDL SW+ ++
Sbjct: 91 FQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS 150
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY- 228
+A +A+ + M +G P+ Y F V+R C G+ ++ V++ GY
Sbjct: 151 CFANNSMELQAIWTFLDMLELG-FYPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYL 209
Query: 229 EADVDVVNALITMYVK-CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
EADV V LI M+VK GDL A VFD MP+R+ ++W MI+ + + G + LF+
Sbjct: 210 EADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFL 269
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL--- 344
M PD T SSV+SA +G LG+++H VI++G + DV V L+ MY
Sbjct: 270 DMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCA 329
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-AVETYQMMEAEGSMPDEITIA 403
+ G+ ++ KVF RM +V+SWT +I+ Y S DK A+E + M + P+ + +
Sbjct: 330 ADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIWPNHFSFS 389
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI---------------------- 441
SVL AC L + G +++ A++ G+ S + N+LI
Sbjct: 390 SVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEK 449
Query: 442 ---------DMYSKCKCIDKALEVFHQIPDKNV----ISWTSIILGLRLNNRSFE 483
D Y+K ++A +F++I D + ++ S++ G +N + E
Sbjct: 450 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAINLKHME 504
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 167/313 (53%), Gaps = 9/313 (2%)
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
+M + PD T S ++ + + +LG+ VH +++ G D V N LI +Y G
Sbjct: 65 LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 124
Query: 348 NREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
+ E +F M +K D+VSW+ M+SC+ + + +A+ T+ M G P+E A+V+
Sbjct: 125 DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVI 184
Query: 407 SACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKC-IDKALEVFHQIPDKN 464
AC+ + +G ++ ++TG L + + + LIDM+ K + A +VF ++P++N
Sbjct: 185 RACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 244
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+++WT +I + +A+ F M L+ P+ T S+LSAC +G L GK++H+
Sbjct: 245 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 304
Query: 524 HALRIGVAFDGFLPNALLDMYVRC---GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+R+G+A D + +L+DMY +C G + + F E +V +W ++T Y + G+
Sbjct: 305 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGE 364
Query: 580 -GALAEEFFRKMI 591
A E F KMI
Sbjct: 365 CDKEAIELFCKMI 377
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A T +M + + PD T + +L +C N LG +H+ M++GL ++ NTLI
Sbjct: 59 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 118
Query: 443 MYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
+YSKC + A +F + +K +++SW++++ N+ +A+ F M+ L PN
Sbjct: 119 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEY 178
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVR-CGRMKPAWNQFN 558
+++ AC+ G+ I+ ++ G + D + L+DM+V+ G + A+ F+
Sbjct: 179 CFAAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 238
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
ER++ W +++T +A+ G A + F M
Sbjct: 239 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 271
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 247/488 (50%), Gaps = 42/488 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + + WN +I G+A + +L+LY M +G + P+ YTFP
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLG-LLPNSYTFPF 69
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC----------------- 245
+L++C G+++H V++ G++ D+ V +LI+MYV+
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129
Query: 246 --------------GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
GD+ A+ +FD +P +D +SWNAMISGY E G Y + L LF M +
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ V PD T +V+SA G +LGR+VH +V GF ++ + N LI +Y G E
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW T+I Y L +A+ +Q M G P+++T+ SVL ACA
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ + K++ SW
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ R+ + F +M + ++P+ +T V +LSAC+ G L G+ I
Sbjct: 370 AMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD 429
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
++ + + ++D+ G K A N+ E D W LL G LA
Sbjct: 430 YKMTPKLEHY--GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA 487
Query: 584 EEFFRKMI 591
E F + +I
Sbjct: 488 ESFAQNLI 495
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 217/442 (49%), Gaps = 32/442 (7%)
Query: 108 KRGYDEGLYLHSV----------------VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
K G+D LY+H+ V SH V A ++ + GD+ A
Sbjct: 92 KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F ++ +D+ SWN +I GYA+ G + EAL L++ M + V+PD T+ VL C
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM-NVRPDESTYVTVLSACAHSG 210
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G++VH V G+++++ +VNALI +Y KCG++ A +F G+ +D ISWN +I
Sbjct: 211 SIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIG 270
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGF 329
GY Y + L+LF M P+ +T+ SV+ A +G +GR +H Y+ K G
Sbjct: 271 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 330
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ S+ LI MY G+ E +VF+ M K + SW MI + D + + +
Sbjct: 331 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSR 390
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCK 448
M G PD+IT +LSAC+ G LDLG + + + + + +ID+
Sbjct: 391 MRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 450
Query: 449 CIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+A E+ + + + + + W S++ +++ + E F + ++ ++P + + +LS
Sbjct: 451 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHG-NVELAESFAQNLIKIEPENPSSYILLS 509
Query: 508 A----------CARIGALMCGK 519
ARI AL+ GK
Sbjct: 510 NIYASAGRWEDVARIRALLNGK 531
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 172/380 (45%), Gaps = 39/380 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G ++AL+ + M ++N+ DE V ++ C + G +HS V
Sbjct: 165 NAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDD 224
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G++ A +F + +D+ SWN LIGGY + EAL L
Sbjct: 225 HGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLL 284
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G DV T VL C + + G+ +HV++ + G + +LI M
Sbjct: 285 FQEMLRSGETPNDV-TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 343
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ M + SWNAMI G+ +G LF MR++ ++PD +T
Sbjct: 344 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITF 403
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++SA G LGR + F + + K+ ++E
Sbjct: 404 VGLLSACSHSGMLDLGRHI-------------------------FRSMTQDYKMTPKLE- 437
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ MI S L +A E ME E PD + S+L AC GN++L
Sbjct: 438 ----HYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELAESF 490
Query: 422 HQLAMR---TGLISYIIIAN 438
Q ++ SYI+++N
Sbjct: 491 AQNLIKIEPENPSSYILLSN 510
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 33/272 (12%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF ++ + + W TMI + S P ++ Y M + G +P+ T +L +CA
Sbjct: 20 VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSK-------CKCIDK--------------- 452
G ++H ++ G + + +LI MY + K D+
Sbjct: 80 FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139
Query: 453 ---------ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
A ++F +IP K+V+SW ++I G EAL F +MM +N++P+ T
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V++LSACA G++ G+++H+ G + + NAL+D+Y +CG ++ A F +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 291
>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
Length = 736
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 249/465 (53%), Gaps = 10/465 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +GN+ ++K GDL F M RD SWNV++ G GF +E L + ++
Sbjct: 82 VSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLR- 140
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V G +P+ T V+ C + G+++H +VIR G+ V N+++ MY D +
Sbjct: 141 VWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSL 197
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR +FD M +RD ISW+ +I Y ++ E + GL LF M+ E +PD +T++SV+ A
Sbjct: 198 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 257
Query: 309 ELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
++ D +GR VHG+ I+ GF DV VCN LI MY + + +VF +++VSW
Sbjct: 258 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 317
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
++++ + + D+A+E + +M E DE+T+ S+L C +H + +R
Sbjct: 318 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 377
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G S + ++LID Y+ C +D A V + K+V+S +++I GL RS EA+
Sbjct: 378 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 437
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVR 546
F M PN++T++S+L+AC+ L K H A+R +A D + +++D Y +
Sbjct: 438 FCHM--RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 495
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG ++ A F+ E+++ +W ++++ YA G A F +M
Sbjct: 496 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 540
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 224/439 (51%), Gaps = 8/439 (1%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G + E +S Y + G D + FP V + C + L +G+ + +++ G+E+ V
Sbjct: 24 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVS 83
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N++ Y+KCGDL FD M RD +SWN ++ G + G +GL F +R
Sbjct: 84 VGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 143
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+P+ TL VI A + + G ++HGYVI+ GF SV N ++ MY +
Sbjct: 144 FEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSAR 200
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACL 412
K+F M +DV+SW+ +I Y S P ++ ++ M E + PD +T+ SVL AC +
Sbjct: 201 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 260
Query: 413 GNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
++D+G +H ++R G ++ + + N+LIDMYSK +D A VF + +N++SW SI
Sbjct: 261 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 320
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G N R EAL F M+ ++ + VT+VS+L C + K IH +R G
Sbjct: 321 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 380
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ ++L+D Y C + A +S +DV + + +++G A G+ A F
Sbjct: 381 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 440
Query: 590 MIDSKGNWRKLMGLFRKCQ 608
M D+ N ++ L C
Sbjct: 441 MRDTP-NAITVISLLNACS 458
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 229/459 (49%), Gaps = 27/459 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L M+ L A +F +M +RD+ SW+V+I Y ++ L L++ M
Sbjct: 185 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 243
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRAR 252
+PD T VL+ C + D+ G+ VH IR G++ ADV V N+LI MY K D+ A
Sbjct: 244 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 303
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD R+ +SWN++++G+ N Y + L +F +M + V+ D +T+ S++ +
Sbjct: 304 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 363
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG +I+ G+ + + LI Y S ++ V M KDVVS +TMIS
Sbjct: 364 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 423
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-I 431
+ D+A+ + M P+ IT+ S+L+AC+ +L H +A+R L I
Sbjct: 424 GLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 480
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I + +++D Y+KC I+ A F QI +KN+ISWT II +N +AL F +M
Sbjct: 481 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 540
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCG--------KEIHAHALRIGVAFDGFLPNALLD 542
PN+VT ++ LSAC G + G +E H +L+ + ++D
Sbjct: 541 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ--------HYSCIVD 592
Query: 543 MYVRCGRMKPAWNQFNSNERDV----SAWNILLTGYAER 577
M R G + A + DV SAW +L+G R
Sbjct: 593 MLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR 631
>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
Length = 680
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 240/465 (51%), Gaps = 16/465 (3%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
L M+V+ G + A +F M +R+ W V+I Y + G+ +EAL L+++ + GV+
Sbjct: 1 LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSL-LEGVR 59
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV--DVVNALITMYVKCGDLVRAR 252
P TF +L C L +GK++H + G++ + + +LI MY KCG L A
Sbjct: 60 PSEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAW 119
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
V + + RD W MI+ G+ + L M P MT +V+ A +
Sbjct: 120 KVMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACK--- 176
Query: 313 DEKLGREV----HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
D R+V HG + + G DV V L+ MY +G+ ++ ++VFS++E++DV SW
Sbjct: 177 DHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWN 236
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+++ Y ++A+ Y+ M EG PD +T+ +V+ CA L +L+ G ++HQ +
Sbjct: 237 CLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASS 296
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G S +++ LI Y +C ++ ALE+F +P ++ ++W ++I L ++ A+ FF
Sbjct: 297 GFASDLMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFF 356
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
++M + P+ VTL+++L C +G K +H+ G D + N L+ Y RC
Sbjct: 357 QRMQQEGMAPSRVTLLTVLGLCGSVGE---AKLVHSCVRESGFEQDSEVKNTLITAYGRC 413
Query: 548 GRMKPAWNQFNSNERDV-SAWNILLTGYAERGQGALAEEFFRKMI 591
G + A F + R + S+WN ++ YA +G+ A E F +M+
Sbjct: 414 GGLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMV 458
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 241/510 (47%), Gaps = 15/510 (2%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKT--MSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
E + L+ C D+G LH ++ + ++ L + + M+ K G L AW V
Sbjct: 62 EGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKV 121
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
K+ RD+ W V+I + G D A L +RM + G +P TF VLR C P+
Sbjct: 122 MEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMD-LEGDRPSKMTFMAVLRACKDHPE 180
Query: 213 LKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G +H + G E+DV V +L+ MY + GD +A+ VF + RD SWN +++
Sbjct: 181 ARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLA 240
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
Y + L+L+ M V PD +TL++VI + D + G +H + GF+
Sbjct: 241 AYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFAS 300
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
D+ + LI Y G E ++F + ++D V+W TMI+ P+ A+ +Q M+
Sbjct: 301 DLMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQ 360
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
EG P +T+ +VL C +G L +H +G + NTLI Y +C +
Sbjct: 361 QEGMAPSRVTLLTVLGLCGSVGEAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLP 417
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM---LNLKPNSVTLVSILSA 508
+ALE+F +P K SW +++ + AL F +M+ ++P+ T++ L++
Sbjct: 418 QALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNS 477
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSA 566
C +L GK + + V DGF+ A++DM RCG + A F+ +D
Sbjct: 478 CR---SLADGKLVISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVL 534
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDSKGN 596
W ++ +A G A A F M+ G
Sbjct: 535 WTTMVAAFARHGHSARALGLFEAMLLDGGG 564
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 248/517 (47%), Gaps = 21/517 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLC-EWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G L++A + L M + + ++R C + G LH ++ + V +
Sbjct: 144 GKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGV 203
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + ++M+ ++GD A VF ++ RD+ SWN L+ Y++ ++AL LY+ M + G
Sbjct: 204 GTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMM-LEG 262
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD T V+ C + DL++G +H + G+ +D+ + ALIT Y +CG L A
Sbjct: 263 VKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLEAAL 322
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F+ +P RD ++WN MI+ ++ + F M++ + P +TL +V+ VG
Sbjct: 323 EIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVG 382
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ KL VH V + GF D V N LI Y G + ++F + K SW M+
Sbjct: 383 EAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLPQALEIFEALPRKIESSWNAMMG 439
Query: 373 CYEGSVLPDKAVETYQMMEAEGSM--PDEITIASVLSACACL--GNLDLGIKLHQLAMRT 428
Y P A+E + M M P TI L++C L G L + L
Sbjct: 440 AYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRSLADGKLVISSIPESLVEED 499
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIF 487
G + ++DM ++C +D A E FH++ +K+ + WT+++ + S AL
Sbjct: 500 GFVQA-----AMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHGHSARALGL 554
Query: 488 FRKMMLNL--KPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGF-LPNALLDM 543
F M+L+ P+ VTLVS+LSAC+ G L G +I A A GV + L ++D+
Sbjct: 555 FEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQIFASTASDFGVQWRSLELYGCVIDL 614
Query: 544 YVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERG 578
R G+++ A S++ S+ W LL RG
Sbjct: 615 LGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVRG 651
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 237/463 (51%), Gaps = 22/463 (4%)
Query: 139 MFVKFGDLGHAWYVFGKMCDR--------DLFSWNVLIGGYAKAGFFDEALSLY---QRM 187
++ K GDL A +F + F N ++ YA AG EA+ LY QRM
Sbjct: 67 LYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM 126
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV + +T+P VL+ C G+ VH V+R G+ +D+ V AL+ MY KCG+
Sbjct: 127 ----GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A VFD M RD + W AMI+ Y + +K LMLF M+E D +T SV SA
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+GD ++ VHGY + GF DVSV N ++ MY GN E VF RME ++ +SW
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+M+S Y + P A+ + M+A P+ +T ++SAC+ LG+ LG KLH +
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 362
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFH--QIPDKNVISWTSIILGLRLNNRSFEAL 485
+ + + N ++DMY KC +D A+E+F+ ++ +++V SW +I G ++ EAL
Sbjct: 363 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 422
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F +M + ++PN +T SILSAC+ G + G++ A ++ V + ++DM
Sbjct: 423 ELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDML 482
Query: 545 VRCGRMKPAW---NQFNSNERDVSAWNILLTGYAERGQGALAE 584
R G + A+ + S D W LL G L E
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSD-EVWGALLLACRIHGNTELGE 524
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 199/367 (54%), Gaps = 16/367 (4%)
Query: 238 LITMYVKCGDLVRARLVFDGM--------PKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
LI +Y K GDL AR +FD + N M+ Y G + + L+I M
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123
Query: 290 REVLVDPDFMTLSSV--ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
+ + V + T V + ASEL G VHG V++ GF D+ V L+ MY G
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASEL--GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCG 181
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +VF RM +DVV WT MI+ YE + P KA+ ++ M+ EG + DEIT SV S
Sbjct: 182 EIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVAS 241
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A LG+ + I +H A+ G I + + N+++ MY+KC +++A VF ++ ++N IS
Sbjct: 242 AVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGIS 301
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W S++ G N R +AL F +M + PN VT + ++SAC+ +G+ G+++H +
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALA 583
+ D L NA++DMY++CG + A FN+ ERDVS+WN+L++GY G G A
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421
Query: 584 EEFFRKM 590
E F +M
Sbjct: 422 LELFSRM 428
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 226/434 (52%), Gaps = 17/434 (3%)
Query: 60 TKNPNSRLNELCLN-----GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
T+ PNS L L G +A+ MQ + + V+ ++++C + G G
Sbjct: 92 TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFG 151
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H V +T + + A + M+ K G++G A VF +M RD+ W +I Y +A
Sbjct: 152 EVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQA 211
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
+AL L+++M G + ++ T V G + D + VH + + G+ DV V
Sbjct: 212 ERPLKALMLFRKMQEEGFLGDEI-TAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSV 270
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+++ MY KCG++ RARLVFD M +R+ ISWN+M+SGY +NG L LF M+
Sbjct: 271 GNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASEC 330
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
DP+ +T ++SA +G + LGR++H +VI D ++ N ++ MY+ G+ + +
Sbjct: 331 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 390
Query: 355 VFSRME--SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+F+ E +DV SW +IS Y +A+E + M+ EG P++IT S+LSAC+
Sbjct: 391 MFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 450
Query: 413 GNLDLGIK----LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS- 467
G +D G K + +L++R + Y ++DM + +++A + +IP +
Sbjct: 451 GLIDEGRKCFADMTKLSVRPEMKHYA----CMVDMLGRAGFLNEAFRLIKKIPSRPSDEV 506
Query: 468 WTSIILGLRLNNRS 481
W +++L R++ +
Sbjct: 507 WGALLLACRIHGNT 520
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 228/420 (54%), Gaps = 2/420 (0%)
Query: 95 EDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
ED V+ ++ C G +H+ K S+ N L+ +VK G L + +F
Sbjct: 215 EDFYVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFD 274
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
+M +R++ SW+ +I G+ + G +EALSL+ RM G + P+ +T L C L
Sbjct: 275 EMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLI 334
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+++ ++R GY ++V ++NA +T ++ L+ A VF+ +D +SWNAM++GY
Sbjct: 335 CSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYL 394
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ Y + + M V PD T +S+++ + + +LG +VHG ++K G+ +D+
Sbjct: 395 QLA-YFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDIC 453
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L MY+ +G K F M S DV SWT M + P KA++ M+ G
Sbjct: 454 VGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVG 513
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
++ T+A+ L++CA L +++ G K H L ++ G + + N L+DMY+KC C+ A
Sbjct: 514 VRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSAN 573
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
VF + +++V+SWT++I+G N ++ EAL F +M +PN +T + +L+AC++ G
Sbjct: 574 VVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGG 633
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 198/393 (50%), Gaps = 10/393 (2%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C D + G +H ++ + N ++ YVKCG L +FD MP+R+
Sbjct: 222 LQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNV 281
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW+A+I+G+ ++G + L LF M + + P+ TL S + A L +++
Sbjct: 282 VSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYA 341
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV---L 379
+++++G+ +V + N + + E +VF SKD VSW M++ Y L
Sbjct: 342 FIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFEL 401
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
P + ++ M E PD T AS+L+ A L LG+++H +++G + I + N+
Sbjct: 402 P----KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNS 457
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPN 498
L DMY K + + + F ++ +V SWT + G +AL + + + ++ N
Sbjct: 458 LCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLN 517
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
TL + L++CA + ++ GK+ H +++G D + NALLDMY +CG M A F
Sbjct: 518 KFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFR 577
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
S +ER V +W ++ G+A GQ A + F +M
Sbjct: 578 SMDERSVVSWTTMIMGFAHNGQTKEALQIFDEM 610
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 36/401 (8%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V L NAFL+ ++ L A VF +D SWN ++ GY + +F+ L + R
Sbjct: 351 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFE--LPKFWRRM 408
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ VKPD +TF +L + + + G +VH +++ GY D+ V N+L MYVK L
Sbjct: 409 NLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKL 468
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+ FD M D SW M +G + GE MK L + M+ V V + TL++ +++
Sbjct: 469 LDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSC 528
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + G++ HG IK+G DV V N L+ MY G VF M+ + VVSWT
Sbjct: 529 ANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWT 588
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMR 427
TMI + + +A++ + M + P+ IT VL+AC+ G +D K ++
Sbjct: 589 TMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSAD 648
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G+ ++++ + CI +A ++ Q+P
Sbjct: 649 HGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMP-------------------------- 682
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+P S+ ++L AC G + GK HAL +
Sbjct: 683 -------FQPGSLVWQTLLGACLVHGDIETGKRAAEHALNL 716
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S L C + G +H ++ L + N +++ Y KC + L++F ++P++
Sbjct: 220 SFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPER 279
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEI 521
NV+SW++II G + R EAL F +M + + PN TLVS L AC+ L+C +I
Sbjct: 280 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQI 339
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
+A +R+G + FL NA L +R ++ A F S +D +WN ++ GY +
Sbjct: 340 YAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYF 399
Query: 581 ALAEEFFRKM 590
L +F+R+M
Sbjct: 400 ELP-KFWRRM 408
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
VS L C G IHA L+ + F F N +L+ YV+CGR+ F+ E
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPE 278
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM 590
R+V +W+ ++ G+ + G+ A F +M
Sbjct: 279 RNVVSWSAIIAGFVQHGRPNEALSLFGRM 307
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 210/401 (52%), Gaps = 5/401 (1%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P + TF +L+ C DL G+ VH + G ++ AL MY KC AR V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR--EVLVDPDFMTLSSVISASELVG 312
FD MP RDR++WNA+++GY NG + + M+ E PD +TL SV+ A
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
REVH + ++ G + V+V ++ Y G E VF M ++ VSW MI
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A+ + M EG + ++ + L AC LG LD ++H+L +R GL S
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV-ISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N LI Y+KCK D A +VF+++ +K ISW ++ILG N +A F +M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L N++P+S TLVS++ A A I + + IH +++R + D ++ AL+DMY +CGR+
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+S +R V WN ++ GY G G A E F +M
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM 414
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 246/502 (49%), Gaps = 28/502 (5%)
Query: 101 LVRLCEWKRGYDEGLYLHSVV-SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
L++LC + G +H+ + ++ ++ S+ A +M+ K A VF +M R
Sbjct: 22 LLKLCAARADLATGRAVHAQLEARGLASESI-ASTALANMYFKCRRPADARRVFDRMPSR 80
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
D +WN ++ GYA+ G A+ RM GG +PD T VL C L +E
Sbjct: 81 DRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACRE 140
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH +R G + V+V A++ Y KCG + AR VFD MP R+ +SWNAMI GY +NG
Sbjct: 141 VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGN 200
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG-----REVHGYVIKMGFSDDV 333
+ + LF M + VD +T +SV++A + G+ LG R VH ++++G S +V
Sbjct: 201 ATEAMALFWRMVQEGVD---VTDASVLAALQACGE--LGYLDEVRRVHELLVRVGLSSNV 255
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDV-VSWTTMISCYEGSVLPDKAVETYQMMEA 392
SV N LI Y + +VF+ + +K +SW MI + + P+ A + M+
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
E PD T+ SV+ A A + + +H ++R L + + LIDMYSKC +
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A +F D++VI+W ++I G + A+ F +M PN T +S+L+AC+
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435
Query: 512 IGALMCGKEIHA-----HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERD 563
G + G++ A + L G+ G ++D+ R G++ AW+ F N E
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYG----TMVDLLGRAGKLDEAWS-FIKNMPIEPG 490
Query: 564 VSAWNILLTGYAERGQGALAEE 585
+S + +L LAEE
Sbjct: 491 ISVYGAMLGACKLHKNVELAEE 512
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 187/406 (46%), Gaps = 3/406 (0%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D LV+++ C R +H+ + V + A L + K G + A VF
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M R+ SWN +I GYA G EA++L+ RM G D L+ CG + L
Sbjct: 178 DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVL-AALQACGELGYL 236
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ VH ++R G ++V V NALIT Y KC A VF+ + K+ RISWNAMI G
Sbjct: 237 DEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILG 296
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ +N LF M+ V PD TL SVI A + D R +HGY I+ D
Sbjct: 297 FTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQD 356
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V LI MY G ++F + V++W MI Y AVE ++ M+
Sbjct: 357 VYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKG 416
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
GS+P+E T SVL+AC+ G +D G K + GL + T++D+ + +D
Sbjct: 417 TGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLD 476
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
+A +P + IS +LG +++ E +++ L P
Sbjct: 477 EAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGP 522
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 33/302 (10%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P T ++++ D GR VH + G + + L MY + +V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE--GSMPDEITIASVLSACACLG 413
F RM S+D V+W +++ Y + LP A+E M+ E G PD +T+ SVL ACA
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L ++H A+R GL + ++ ++D Y KC ++ A VF +P +N +SW ++I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 474 GLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N + EA+ +F+R + + ++++ L AC +G L + +H +R+G++
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS- 252
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+VS N L+T YA+ + LA + F ++ +
Sbjct: 253 -----------------------------SNVSVTNALITTYAKCKRADLAAQVFNELGN 283
Query: 593 SK 594
K
Sbjct: 284 KK 285
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS- 559
T ++L CA L G+ +HA G+A + AL +MY +C R A F+
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
RD AWN ++ GYA G + A E +M +G R
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGER 116
>gi|48716412|dbj|BAD23021.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50251414|dbj|BAD28452.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 727
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 245/469 (52%), Gaps = 23/469 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + KT + + + N+ LS++ GD A +FG+M DRD+ SW +IG +G+
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL L++ M G ++PD VLR C + D++ G VH R G + D+ V N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY KC DL AR VFD + ++ +SWN M+SG G Y + L L + ++ V
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLAL--QIGVVG 327
Query: 297 DFMTLSSVISASELVGDEKLG----REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D TL+ ++ +L ++LG R VHG I+ +++ N L+ Y G E+
Sbjct: 328 DETTLAVLL---QLCKKKRLGGQAARSVHGAAIRRRLL-SMALLNALLDAYGKCGLVEDV 383
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F M ++V++W+T+I+ + P A+ + M G P+ IT+ S++ AC
Sbjct: 384 LRLFQGMRERNVITWSTVIAACAHNARPHAAMACFVAMLVTGERPNSITVLSLVEACGSC 443
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + H +A+R+GL + + N L+ MY KC + + VF +P K+V++W S+I
Sbjct: 444 AEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVKDVLTWNSMI 503
Query: 473 LGLRLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACARIG----ALMCGKEIHAHA 525
L +N R+ +AL +M ++PN VT+++ L ACA G + C + + +
Sbjct: 504 GALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIGCLESMARQS 563
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLT 572
L+ V + ++DM R G + A + +S +AW+ LL+
Sbjct: 564 LQPRVEH----VSCVVDMLARAGDLDGAAEIVRRSSGGGSPAAWSALLS 608
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 189/413 (45%), Gaps = 20/413 (4%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLV--RLCEWKRGYDEGLYLHSVVSKTMSH 127
CL +G +QAL+ M + + D +V +V R C G +H+V ++
Sbjct: 204 CLGSGYADQALRLFREMLA-DGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQ 262
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ + N+ + M+ K DL A VF + +++ SWN ++ G AG + EAL L
Sbjct: 263 GDLFVDNSLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQ 322
Query: 188 FWVGGVKPDVYTFPCVLRTC-----GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
GV D T +L+ C GG + + VH IR + ++NAL+ Y
Sbjct: 323 I---GVVGDETTLAVLLQLCKKKRLGG----QAARSVHGAAIRRRL-LSMALLNALLDAY 374
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + +F GM +R+ I+W+ +I+ N + F+ M P+ +T+
Sbjct: 375 GKCGLVEDVLRLFQGMRERNVITWSTVIAACAHNARPHAAMACFVAMLVTGERPNSITVL 434
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S++ A + R HG ++ G +++V N L+ MY G +VF M K
Sbjct: 435 SLVEACGSCAEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVK 494
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSACACLGNLDLGIK 420
DV++W +MI + A+ MEAEG P+ +T+ + L ACA G ++ GI
Sbjct: 495 DVLTWNSMIGALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIG 554
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ R L + + ++DM ++ +D A E+ + + +W++++
Sbjct: 555 CLESMARQSLQPRVEHVSCVVDMLARAGDLDGAAEIVRRSSGGGSPAAWSALL 607
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++T + +AN+L+ +Y+ A +F ++PD++V SWTS+I +
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 481 SFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +AL FR+M+ + L+P+ V V +L ACA + + G +HA A R G+ D F+ N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNW 597
+L+DMY +C ++ A F+ ++V +WN +L+G G A I G+
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQIGVVGDE 329
Query: 598 RKLMGLFRKCQ 608
L L + C+
Sbjct: 330 TTLAVLLQLCK 340
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 240/456 (52%), Gaps = 17/456 (3%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H +V + + +++FG + A+ VF +M +RD+ +WN ++ G + +A++L R
Sbjct: 99 HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158
Query: 187 MFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M VG GV D T VL C + D +HV+ ++ G ++ V NALI +Y K
Sbjct: 159 M--VGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKL 216
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G L A VF GM RD ++WN++IS + G+ + LF M E V PD +TL S+
Sbjct: 217 GMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLA 276
Query: 306 SASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
SA GDE + VH YV + G+ D+ N ++ MY + +KVF + +DV
Sbjct: 277 SAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336
Query: 365 VSWTTMISCYEGSVLPDKAVETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VSW T+I+ Y + L ++A+ Y M EG P + T SVL A + LG L G+++H
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L+++TGL + + LID+Y+KC + +A+ +F +P ++ W +II GL ++ +
Sbjct: 397 LSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA--- 539
AL F +M +KP+ VT VS+L+AC+ G + G+ + G +P A
Sbjct: 457 ALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF----FDLMQTVYGIVPIAKHY 512
Query: 540 --LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
++DM R G++ A+ S + D + W LL
Sbjct: 513 TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL 548
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 209/404 (51%), Gaps = 10/404 (2%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRA 251
++PD +TFP ++R P ++H +R G +V +L+ Y++ G + A
Sbjct: 65 LRPDSFTFPPLVRAA---PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD MP+RD +WNAM+SG N + L M V D +TLSSV+ ++
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD L +H Y +K G S ++ VCN LI +Y G E VF M +D+V+W ++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
S E AVE + M G PD +T+ S+ SA A G+ +LG K +H R G
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD-ELGAKSVHCYVRRRGW 300
Query: 431 -ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ II N ++DMY+K ID A +VF +PD++V+SW ++I G N + EA+ +
Sbjct: 301 DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYN 360
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + LKP T VS+L A + +G L G +HA +++ G+ D ++ L+D+Y +C
Sbjct: 361 DMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC 420
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
G++ A F R WN ++ G G GA A F +M
Sbjct: 421 GKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQM 464
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 206/456 (45%), Gaps = 9/456 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ LC N A+ L M + D L +++ +C L +H K
Sbjct: 137 NAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVK 196
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA + ++ K G L A +VFG M RDL +WN +I + G A+ L
Sbjct: 197 HGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVEL 256
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMY 242
+ M GV PDV T + D K VH +V R G++ D+ NA++ MY
Sbjct: 257 FHGMM-ESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMY 315
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K + A+ VFD +P RD +SWN +I+GY +NG + + ++ M + P T
Sbjct: 316 AKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTF 375
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV+ A +G + G +H IK G + DV V LI +Y G E +F M
Sbjct: 376 VSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPR 435
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ W +I+ KA+ + M+ E PD +T S+L+AC+ G +D G
Sbjct: 436 RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF 495
Query: 422 HQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
L M+T G++ ++DM + +D+A E +P K + W +++ R++
Sbjct: 496 FDL-MQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIH 554
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSAC-ARIG 513
+ E + + L P +V ++S A+IG
Sbjct: 555 G-NVEMGKVASQNLFELDPENVGYYVLMSNMYAKIG 589
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 152/313 (48%), Gaps = 8/313 (2%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEK 354
PD T ++ A+ ++H +++G +V L+ YL FG E +
Sbjct: 67 PDSFTFPPLVRAAP---GPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF M +DV +W M+S + AV M EG D +T++SVL C LG+
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L + +H A++ GL + + N LID+Y K + +A VF + +++++W SII
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF- 532
+ A+ F MM + + P+ +TLVS+ SA A+ G + K +H + R G
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D NA++DMY + ++ A F N +RDV +WN L+TGY + G A + M
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363
Query: 592 DSKGNWRKLMGLF 604
+ +G + + G F
Sbjct: 364 NHEG-LKPIQGTF 375
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 264/486 (54%), Gaps = 15/486 (3%)
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+++ ++H + L N+ ++ +V G L A +F +++ SW +LI G AK F E
Sbjct: 47 IITSGLTH-NTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVE 105
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
A+ +++ M +G KP+ T VL + ++ K VH +R G+E +V V AL+
Sbjct: 106 AIDVFREM-TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY K G + AR +F+ M +R+ +SWNA++SGY ++G + + LF +MR + DF
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ S+I AS VG ++G +HG++I+ G+ +D + L+ +Y+S ++ +VFS M
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM 284
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLG 418
KDV +WT M++ + D+A++ + +M+ + D I + +LS+C+ G L G
Sbjct: 285 FVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQG 344
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H LA++T + I + + +IDMY+ C ++ A F+ + +K+V+ W ++I G +N
Sbjct: 345 RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN 404
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+A+ F +M L P+ T VS+L AC+ G + G +I H ++ + D +P
Sbjct: 405 GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK--TSHD--IP 460
Query: 538 N-----ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N ++D+ R G++ A++ N+ + D ++ LL G L E +K+
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKI 520
Query: 591 IDSKGN 596
+ + N
Sbjct: 521 FEMEPN 526
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 212/399 (53%), Gaps = 6/399 (1%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P + +LR + DLK +++H +I G + + N+L+ YV CG L A+ +
Sbjct: 22 PLAQSHASILRK---LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQI 78
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F P ++ +SW +ISG +N +++ + +F M P+ +T+SSV+ A +G
Sbjct: 79 FHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLI 138
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++ + VH + ++ GF +V V L+ MY FG ++F M ++VVSW ++S Y
Sbjct: 139 RIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGY 198
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++A++ + +M +G + D TI S++ A +G L +G +H +RTG +
Sbjct: 199 SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDK 258
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-- 492
I L+D+Y C+D A VF ++ K+V +WT ++ G A+ F KM+
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGI 318
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
NLK +S+ L+ ILS+C+ GAL G+ +HA A++ A + F+ +A++DMY CG ++
Sbjct: 319 QNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLED 378
Query: 553 AWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F E+DV WN ++ G G G A + F +M
Sbjct: 379 AKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 125/254 (49%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+A+ + M+ + VD +++L+ G +H + +T +
Sbjct: 201 HGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + ++V + A VF +M +D+ +W +++ G++ +D A+ + +M +
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D +L +C L++G+ VH I+ + ++ V +A+I MY CG+L A+
Sbjct: 321 LKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F GM ++D + WNAMI+G NG + LF+ M+ +DPD T SV+ A G
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440
Query: 313 DEKLGREVHGYVIK 326
G ++ +++K
Sbjct: 441 MVYEGLQIFYHMVK 454
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 211/400 (52%), Gaps = 10/400 (2%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
FS+NV + +A AL L+ RM ++PD YT P +L P+ + H
Sbjct: 83 FSYNVTLRFFASTRP-RTALRLFLRML-RAALRPDAYTLPFLLLAAARAPEPPFARSAHA 140
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+ R G +A V++L+TMY GD + AR VFDG+P+RD +SWNAM+ Y G
Sbjct: 141 LLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAAD 200
Query: 282 GLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+F M+ E V P+ +T++ V++A GD LGR + +V V + L+
Sbjct: 201 VARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALV 260
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E +VF + KDVV+W MI+ Y + + +A+ + M EG+ PD+I
Sbjct: 261 GMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKI 320
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ VLSACA +G L+LG +L A GL + + L+DMYSKC +DKA++VF ++
Sbjct: 321 TLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKL 380
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCG 518
P KN +W ++I GL N R EA+ F M L+P+ +T + +LSAC G L G
Sbjct: 381 PCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDG 440
Query: 519 KEIH---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ +I + + + ++D+ R G ++ AW+
Sbjct: 441 RRWFNSLTSEFQIIPKIEHY--SCMVDLLARAGHLEEAWD 478
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 2/332 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ ++M+ GD A VF + RD+ SWN ++ Y +AG + +++ M G V
Sbjct: 155 HSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAV 214
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T VL C DL G+ + V E V +AL+ MY KCG++ AR
Sbjct: 215 APNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARR 274
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDG+ +D ++WNAMI+GY +NG + + LF MR+ PD +TL V+SA VG
Sbjct: 275 VFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGA 334
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+LG E+ Y G +V V L+ MY G+ ++ +VF ++ K+ +W +I
Sbjct: 335 LELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICG 394
Query: 374 YEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLI 431
+ +A+ +++M EG PD+IT VLSAC G L G + + L +I
Sbjct: 395 LAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQII 454
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
I + ++D+ ++ +++A + +IP K
Sbjct: 455 PKIEHYSCMVDLLARAGHLEEAWDFVEKIPGK 486
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 4/340 (1%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P S+N + +F + L LF+ M + PD TL ++ A+ + R
Sbjct: 78 PAPTAFSYNVTLR-FFASTRPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFAR 136
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
H + ++G + L+ MY + G+ +VF + +DVVSW M+ YE +
Sbjct: 137 SAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAG 196
Query: 379 LPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+ ++ M EG++ P+E+T+A VL+AC G+L LG L + + ++
Sbjct: 197 MAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVG 256
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
+ L+ MY KC + +A VF I K+V++W ++I G N S EA+ F M
Sbjct: 257 SALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGAS 316
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ +TLV +LSACA +GAL G E+ A+A G+ + ++ AL+DMY +CG + A
Sbjct: 317 PDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQV 376
Query: 557 FNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
F ++ + WN L+ G A G+G A F M + +G
Sbjct: 377 FGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEG 416
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +L V + +G+A + M+ K G++ A VF + +D+ +WN +I GYA+
Sbjct: 237 GRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQ 296
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA++L+ M G PD T VL C V L+ G E+ + G +V
Sbjct: 297 NGMSKEAIALFHSMRQEGA-SPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVY 355
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EV 292
V AL+ MY KCGDL +A VF +P ++ +WNA+I G NG + + F +MR E
Sbjct: 356 VGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEE 415
Query: 293 LVDPDFMTLSSVISASELVGDEKLGR 318
+ PD +T V+SA G K GR
Sbjct: 416 GLRPDDITFIGVLSACVHAGLLKDGR 441
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 4/254 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++A+ SM++ D+ LV ++ C + G L + S
Sbjct: 288 NAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASH 347
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V +G A + M+ K GDL A VFGK+ ++ +WN LI G A G EA+
Sbjct: 348 RGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIRQ 407
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMY 242
++ M G++PD TF VL C LK G+ + F ++ + ++ +
Sbjct: 408 FEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLL 467
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISG--YFENGEYMKGLMLFIMMREVLVDPDFM 299
+ G L A + +P K D + A+++ +N E + ++ IM E +++
Sbjct: 468 ARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQLEPSNSWNYV 527
Query: 300 TLSSVISASELVGD 313
S + ++S+ + D
Sbjct: 528 VSSKIYASSDRLDD 541
>gi|242066066|ref|XP_002454322.1| hypothetical protein SORBIDRAFT_04g028670 [Sorghum bicolor]
gi|241934153|gb|EES07298.1| hypothetical protein SORBIDRAFT_04g028670 [Sorghum bicolor]
Length = 637
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 271/552 (49%), Gaps = 7/552 (1%)
Query: 8 KTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSV-QVLNTQNTSSIATKNPNSR 66
+T+Q P R N N R+P+ S + + ++ Q + ++ K+ ++
Sbjct: 63 RTTQNPGRVNPPNLLDRMPDRSTTKISSAGNLLDERLRTGGQRASGRDPHEGGGKSESAD 122
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVVSKT 124
L G + ++ SM+ + V+ L ++ R C W R + ++ +
Sbjct: 123 FVALAHAGRHAEVVELFCSMRREGVPVNRFVLPSVFRACACLWDRRMLQAVHGLVINCSL 182
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
H+ V G A + ++ FG + A VF + ++ SW+V+IGGYA++ +D+A +
Sbjct: 183 CQHVVV--GTALAAAYIDFGLVDDASKVFNDISQPNVVSWSVIIGGYARSSQWDKAWDAF 240
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M G+ P+V ++ CG + L RGK++H + G+ + V N LI MY K
Sbjct: 241 SAM-QCSGLLPNVSVLVMAIQACGALGCLVRGKQMHTMAVVLGFGRNATVWNCLIDMYGK 299
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CG + R VFD RD++SWN +IS Y G + L + + M+E D TL S
Sbjct: 300 CGSMESCRRVFDTAISRDQVSWNTIISSYVRLGLCEEVLEMIVQMQESGFTIDRFTLGSG 359
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++A + D GR HGY+I+ +V L+ MY G + VF RM+ ++
Sbjct: 360 VAACAHLADIDSGRAFHGYLIRRALDTEVIQGTALLDMYSKCGYMDLARLVFDRMDERNY 419
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSW ++S + + D A++T++ ME+ ++ T A++L C + G ++H
Sbjct: 420 VSWDALLSGFVENGRVDSALDTFRQMESANIKSNQHTFANLLRLCGDRRYREYGRQIHGH 479
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A+R +++ LIDMY+KC I+ + +F ++ ++N+ISW +++ G + +
Sbjct: 480 AIRVINQMNVVLETELIDMYAKCGSIEVSQLLFLRMNERNLISWNTLLSGYVGDGQPVAT 539
Query: 485 LIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ +R+M M ++P+ TL +L+ C G L G++IHA ++ + L L+ M
Sbjct: 540 INIYRQMEMACVRPDHYTLAGLLNLCRFQGLLRYGRQIHARLIKTSSEMNVVLQTLLVHM 599
Query: 544 YVRCGRMKPAWN 555
Y +C R + A N
Sbjct: 600 YFKCKRWRDAHN 611
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 210/421 (49%), Gaps = 3/421 (0%)
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A AG E + L+ M GV + + P V R C + D + + VH VI
Sbjct: 127 AHAGRHAEVVELFCSMR-REGVPVNRFVLPSVFRACACLWDRRMLQAVHGLVINCSLCQH 185
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V V AL Y+ G + A VF+ + + + +SW+ +I GY + ++ K F M+
Sbjct: 186 VVVGTALAAAYIDFGLVDDASKVFNDISQPNVVSWSVIIGGYARSSQWDKAWDAFSAMQC 245
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ L I A +G G+++H + +GF + +V N LI MY G+ E
Sbjct: 246 SGLLPNVSVLVMAIQACGALGCLVRGKQMHTMAVVLGFGRNATVWNCLIDMYGKCGSMES 305
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VF S+D VSW T+IS Y L ++ +E M+ G D T+ S ++ACA
Sbjct: 306 CRRVFDTAISRDQVSWNTIISSYVRLGLCEEVLEMIVQMQESGFTIDRFTLGSGVAACAH 365
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L ++D G H +R L + +I L+DMYSKC +D A VF ++ ++N +SW ++
Sbjct: 366 LADIDSGRAFHGYLIRRALDTEVIQGTALLDMYSKCGYMDLARLVFDRMDERNYVSWDAL 425
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G N R AL FR+M N+K N T ++L C G++IH HA+R+
Sbjct: 426 LSGFVENGRVDSALDTFRQMESANIKSNQHTFANLLRLCGDRRYREYGRQIHGHAIRVIN 485
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ L L+DMY +CG ++ + F NER++ +WN LL+GY GQ +R+
Sbjct: 486 QMNVVLETELIDMYAKCGSIEVSQLLFLRMNERNLISWNTLLSGYVGDGQPVATINIYRQ 545
Query: 590 M 590
M
Sbjct: 546 M 546
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 175/356 (49%), Gaps = 15/356 (4%)
Query: 120 VVSKTMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
V K M ++V LG N + M+ K G + VF RD SWN +I Y
Sbjct: 269 VRGKQMHTMAVVLGFGRNATVWNCLIDMYGKCGSMESCRRVFDTAISRDQVSWNTIISSY 328
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+ G +E L + +M G D +T + C + D+ G+ H ++IR + +
Sbjct: 329 VRLGLCEEVLEMIVQM-QESGFTIDRFTLGSGVAACAHLADIDSGRAFHGYLIRRALDTE 387
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V AL+ MY KCG + ARLVFD M +R+ +SW+A++SG+ ENG L F M
Sbjct: 388 VIQGTALLDMYSKCGYMDLARLVFDRMDERNYVSWDALLSGFVENGRVDSALDTFRQMES 447
Query: 292 VLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
+ + T ++++ L GD + GR++HG+ I++ +V + LI MY G+
Sbjct: 448 ANIKSNQHTFANLL---RLCGDRRYREYGRQIHGHAIRVINQMNVVLETELIDMYAKCGS 504
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E + +F RM ++++SW T++S Y G P + Y+ ME PD T+A +L+
Sbjct: 505 IEVSQLLFLRMNERNLISWNTLLSGYVGDGQPVATINIYRQMEMACVRPDHYTLAGLLNL 564
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
C G L G ++H ++T +++ L+ MY KCK A V I ++N
Sbjct: 565 CRFQGLLRYGRQIHARLIKTSSEMNVVLQTLLVHMYFKCKRWRDAHNVCTLIRERN 620
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ VE + M EG + + SV ACACL + + +H L + L ++++ L
Sbjct: 134 EVVELFCSMRREGVPVNRFVLPSVFRACACLWDRRMLQAVHGLVINCSLCQHVVVGTALA 193
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
Y +D A +VF+ I NV+SW+ II G +++ +A F M + L PN
Sbjct: 194 AAYIDFGLVDDASKVFNDISQPNVVSWSVIIGGYARSSQWDKAWDAFSAMQCSGLLPNVS 253
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
LV + AC +G L+ GK++H A+ +G + + N L+DMY +CG M+ F++
Sbjct: 254 VLVMAIQACGALGCLVRGKQMHTMAVVLGFGRNATVWNCLIDMYGKCGSMESCRRVFDTA 313
Query: 561 -ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RD +WN +++ Y G L EE ++
Sbjct: 314 ISRDQVSWNTIISSYVRLG---LCEEVLEMIV 342
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 254/503 (50%), Gaps = 11/503 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
D V L++ C + D G +H V + ++ G+ + M+ + G + A V
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGH-LIQMYAQCGSVPEAQQV 62
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +D+F+W +IG Y + G +D AL ++ +M V P T+ +L C
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTES 121
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
LK G E+H +++ G+E DV V ALI MY KCG + A F + RD +SW AMI+
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGF 329
++ ++ L+ M+ V P+ +TL +V +A GD G+ ++ V
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA---YGDPHYLSEGKFIYSLVSSRVM 238
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
DV V N + M+ + G + ++F M +DVV+W +I+ Y + +AV +
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
++ +G ++IT +L+ L +L G +H+L G +++A L+ +Y +C+
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
+A ++F + K+VI+WT + + N EAL F++M L +P S TLV++L
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
CA + AL G++IH+H + G + + AL++MY +CG+M A + F +RD+ W
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
N +L YA+ G + F +M
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQM 501
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 236/485 (48%), Gaps = 3/485 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C G ++AL MQE ++ + V ++ C +G+ +H + + V
Sbjct: 82 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+G A ++M+ K G + AW F ++ RD+ SW +I + F A LY+RM +
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRM-QL 200
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV P+ T V G L GK ++ V E+DV V+N+ + M+ G L
Sbjct: 201 DGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGD 260
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +F+ M RD ++WN +I+ Y +N + + + LF +++ + + +T +++
Sbjct: 261 ARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTS 320
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +H V + G+ DV V L+ +Y + K+F M SKDV++WT M
Sbjct: 321 LTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 380
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
Y + +A++ +Q M+ EG P T+ +VL CA L L G ++H + G
Sbjct: 381 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGF 440
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+++ LI+MY KC + +A VF ++ ++++ W S++ + E L F +
Sbjct: 441 RMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 500
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCG 548
M L+ K ++V+ VS+LSA + G++ G + L+ + L ++D+ R G
Sbjct: 501 MQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAG 560
Query: 549 RMKPA 553
R++ A
Sbjct: 561 RIQEA 565
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 206/403 (51%), Gaps = 10/403 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD F +L+ C ++ G+ VH HV G+E + V LI MY +CG + A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + ++D +W MI Y + G+Y + L +F M+E V P +T ++++A
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G E+HG +++ GF DV V LI MY G+ F R+E +DVVSWT MI+
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA- 180
Query: 374 YEGSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
V D+ A Y+ M+ +G +P++IT+ +V +A L G ++ L +
Sbjct: 181 --ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF-EALIFFR 489
S + + N+ ++M+ + A +F + D++V++W +I++ + N +F EA+ F
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW-NIVITFYVQNENFGEAVRLFG 297
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
++ + +K N +T V +L+ + +L GK IH G D + AL+ +Y RC
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AW F + +DV W ++ YA+ G A + F++M
Sbjct: 358 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 400
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 193/377 (51%), Gaps = 8/377 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG +++S+VS + VR+ N+ ++MF G LG A +F M DRD+ +WN++I Y
Sbjct: 225 EGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYV 284
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F EA+ L+ R+ G+K + TF +L + L +GK +H V GY+ DV
Sbjct: 285 QNENFGEAVRLFGRL-QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDV 343
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V AL+++Y +C +A +F M +D I+W M Y +NG + L LF M+
Sbjct: 344 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 403
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P TL +V+ + + GR++H ++I+ GF ++ V LI MY G E
Sbjct: 404 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEA 463
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF +M +D++ W +M+ Y D+ ++ + M+ +G D ++ SVLSA +
Sbjct: 464 RSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHS 523
Query: 413 GNLDLGIKLHQLAMRTGLISYII-IANTLIDMYSKCKCIDKALEVFHQ----IPDKNVIS 467
G++ G + ++ I+ + ++D+ + I +A+++ + +PD I
Sbjct: 524 GSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDG--IL 581
Query: 468 WTSIILGLRLNNRSFEA 484
W +++ R +N++ +A
Sbjct: 582 WMTLLGACRTHNKTDQA 598
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 253/501 (50%), Gaps = 15/501 (2%)
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
L + + G G LH + K + A + M+ + G L A VF +M D
Sbjct: 103 LPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVC 162
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHV 221
N+LI ++AG +++ L++ M G + P T VL C + L+ G+ +H
Sbjct: 163 RNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHG 222
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVR---ARLVFDGMPKRDRISWNAMISGYFENGE 278
+VI+ G E D NAL++MY KCG + A L F + +D +SWN++I+GY ENG
Sbjct: 223 YVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGL 282
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDVSVCN 337
+ + L LF M P++ TL++V+ LV G+E+HG+V++ G D+SV N
Sbjct: 283 FEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSN 342
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ Y E +F + D+V+W T+I+ Y + P +A++ +Q + G P
Sbjct: 343 ALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAP 402
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMR-TGLISYIIIANTLIDMYSKCKCIDKALEV 456
D +++ S+L+ACA +GNL +GI++H R L+ + N L+ YS+C D A
Sbjct: 403 DSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRS 462
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFR---KMMLNLKP-NSVTLVSILSACARI 512
F I +K+ +SW +I+ + E FFR +M ++ +SVT+++I+
Sbjct: 463 FITIQNKDSVSWNAILSACANSEHHIEQ--FFRLLGEMWHDVTQWDSVTILNIIRMSTFC 520
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G M +E H ++LR+G D + NA+LD Y +CG + A F S R++ N ++
Sbjct: 521 GIKMV-QESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMI 579
Query: 572 TGYAERGQGALAEEFFRKMID 592
+ Y + AE F M +
Sbjct: 580 SCYLKNNCVEDAEMTFNHMAE 600
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 269/579 (46%), Gaps = 54/579 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
NG E+AL M + L N++ C E+ R Y G +H V + +
Sbjct: 280 NGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHY--GKEIHGFVVRHGLEMD 337
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA ++ + K ++ +F D+ +WN +I GY + AL L+Q + +
Sbjct: 338 ISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLF 397
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
G+ PD + +L C V +L+ G VH ++ R + ++NAL++ Y +C
Sbjct: 398 -AGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 456
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVI 305
A F + +D +SWNA++S + +++ F ++ E+ D D +T+ ++I
Sbjct: 457 DAAFRSFITIQNKDSVSWNAILSACANSEHHIE--QFFRLLGEMWHDVTQWDSVTILNII 514
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S G K+ +E HGY +++G++ D SV N ++ Y G + E +F + +++V
Sbjct: 515 RMSTFCGI-KMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIV 573
Query: 366 SWTTMISCY-------------------------------EGSVLPDKAVETYQMMEAEG 394
+ TMISCY + L D+A + +++EG
Sbjct: 574 TGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEG 633
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD I+I ++LSAC L ++ L + H +R L I + L+D YSKC I A
Sbjct: 634 LNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAY 692
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F K+++ +T++I ++ + +A+ F KM+ L++KP+ V L ++LSAC+ G
Sbjct: 693 NLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAG 752
Query: 514 ALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSAWNI 569
+ G +I I GV ++D+ R GR++ A++ + + +AW
Sbjct: 753 LVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGS 812
Query: 570 LLTGYAERGQ---GAL-AEEFFRKMIDSKGNWRKLMGLF 604
LL G+ G L A+ F + GN+ + +F
Sbjct: 813 LLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIF 851
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 14/352 (3%)
Query: 254 VFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV- 311
VFD +P DR+ +A++ G++ L M + P+ + L++ + +S +
Sbjct: 45 VFDAVPALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALP 104
Query: 312 ---GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G LGR +HG +K+G++D V ++ MY G+ + VF M D V
Sbjct: 105 DCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRN 164
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEG---SMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+I+ + L + ++ M A G SMP +T+A VL CA L L G +H
Sbjct: 165 ILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYV 224
Query: 426 MRTGLISYIIIANTLIDMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
++TGL + N L+ MY+KC +D A F I K+V+SW SII G N
Sbjct: 225 IKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFE 284
Query: 483 EALIFFRKMML-NLKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNAL 540
EAL F +M+ PN TL ++L C+ + GKEIH +R G+ D + NAL
Sbjct: 285 EALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNAL 344
Query: 541 LDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ Y + M+ + F S++ D+ WN ++ GY + A + F+ ++
Sbjct: 345 MAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLL 396
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 14/232 (6%)
Query: 390 MEAEGSMPDEITIASVLSACA----CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
M A G P+ + +A+ + + + C G LG LH LA++ G ++A ++DMY
Sbjct: 81 MLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYG 140
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN----LKPNSVT 501
+ + A VF ++ + + +I + FR M+ + P +VT
Sbjct: 141 RIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVT 200
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG---RMKPAWNQFN 558
+ +L CA++ L G+ IH + ++ G+ FD NAL+ MY +CG M A F+
Sbjct: 201 VAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFS 260
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
+ +DV +WN ++ GY+E G A F +MI + N+ L + C
Sbjct: 261 TICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC 312
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 264/512 (51%), Gaps = 30/512 (5%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + E +H + KT H + + ++++ K G + A VF + R+
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ +W L+ GY + AL L+ +M G P YT VL C + ++ GK+VH
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAY-PSNYTLGIVLNACSSLQSIEFGKQVH 188
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++I++ + D + N+L + Y K L A F + ++D ISW ++IS +NG+
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L F+ M + P+ TL+SV+SA ++ LG ++H IK+G+ + + N ++
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 308
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-------EGSVLPDK----AVETYQM 389
+YL G E +K+F ME+ ++V+W MI+ + E V K A+ +Q
Sbjct: 309 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQK 368
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
+ G PD T +SVLS C+ L L+ G ++H +++G+++ +++ L+ MY+KC
Sbjct: 369 LYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGS 428
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSA 508
IDKA + F ++P + +ISWTS+I G + S +AL F M ++ +KPN VT V +LSA
Sbjct: 429 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 488
Query: 509 CARIG---ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-----QFNSN 560
C+ G + E+ I D F L+DMY+R GR++ A++ F N
Sbjct: 489 CSHAGLADEALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFEPN 546
Query: 561 ERDVSAWNILLTGYAERGQGAL----AEEFFR 588
E + W++L+ G G+ L AE+ +
Sbjct: 547 E---TIWSMLIAGCRSHGKSDLGFYAAEQLLK 575
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 222/425 (52%), Gaps = 16/425 (3%)
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
Y FP +L+ C + +H H+++ G+ D+ V+ L+ +Y KCG + A VFD
Sbjct: 66 YYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDN 124
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+P+R+ +W +++GY +N + L LFI M E P TL V++A + + G
Sbjct: 125 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 184
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++VH Y+IK D S+ N L Y F E K F ++ KDV+SWT++IS +
Sbjct: 185 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN 244
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+++ + M ++G P+E T+ SVLSAC + LDLG ++H L+++ G S I+I
Sbjct: 245 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 304
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALI 486
N+++ +Y KC + +A ++F + N+++W ++I G + + AL
Sbjct: 305 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 364
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F+K+ + +KP+ T S+LS C+ + AL G++IH ++ GV D + AL+ MY
Sbjct: 365 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 424
Query: 546 RCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMG 602
+CG + A F R + +W ++TG+A G A + F M + K N +G
Sbjct: 425 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 484
Query: 603 LFRKC 607
+ C
Sbjct: 485 VLSAC 489
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 179/361 (49%), Gaps = 28/361 (7%)
Query: 28 TSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQ 87
+SFY K + F+ K + ++ + + +S+ ++ C NG ++L + M
Sbjct: 207 SSFYSKFRRLEFAIKAFKIIKEKDVISWTSV--------ISSCCDNGQAARSLSFFMDML 258
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLG 147
+ +E L +++ C D G +HS+ K S+ + N+ + +++K G L
Sbjct: 259 SDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLI 318
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE-----------ALSLYQRMFWVGGVKPD 196
A +F M +L +WN +I G+AK E AL+++Q+++ G+KPD
Sbjct: 319 EAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR-SGMKPD 377
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++TF VL C + L++G+++H +I+ G ADV V AL++MY KCG + +A F
Sbjct: 378 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 437
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG--DE 314
MP R ISW +MI+G+ +G + L LF MR V + P+ +T V+SA G DE
Sbjct: 438 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 497
Query: 315 KLGR-EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMI 371
L E+ + D C LI MYL G EE V +M E + + W+ +I
Sbjct: 498 ALYYFELMQKQYNIKPVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETI-WSMLI 554
Query: 372 S 372
+
Sbjct: 555 A 555
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 182/596 (30%), Positives = 283/596 (47%), Gaps = 60/596 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E A+K M LV++ C R D GL+L +
Sbjct: 82 NSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRD-GLWLGKQIHG 140
Query: 124 T---MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
H NA ++M+ K G L A + DRDL +WN +I +++ F EA
Sbjct: 141 CCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEA 200
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALI 239
L ++ R+ + GVKPD TF VL C + L+ GKE+H + +R + V +AL+
Sbjct: 201 L-MFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALV 259
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY CG + RLVFD + R WNAMI+GY ++ K LMLFI M + +
Sbjct: 260 DMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNA 319
Query: 299 MTLSSVISASELVGDEKLGRE--VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T+SS++ A V E + R+ +HGYVIK G + + N LI MY G+ + +++F
Sbjct: 320 TTMSSIVPA--YVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIF 377
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAV---ETYQMMEAEGSM-------------PDEI 400
ME +D+VSW T+I+ Y A+ Q +E + + P+ I
Sbjct: 378 DSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSI 437
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ +VL CA L L G ++H A+R L S + + + L+DMY+KC C++ A VF Q+
Sbjct: 438 TLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM 497
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN------LKPNSVTLVSILSACARIGA 514
P +NVI+W II+ ++ + E+L F M+ +KP VT +++ ++C+ G
Sbjct: 498 PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557
Query: 515 LMCGKEIHAHALR----IGVAFDGFLPNALLDMYVRCGRMKPAW---NQFNSNERDVSAW 567
+ G + H ++ I A D + ++D+ R G+++ A+ N S V AW
Sbjct: 558 VDEGLSLF-HKMKNEHGIEPAPDHYA--CIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW 614
Query: 568 NILLTG---YAERGQGALAEE--------------FFRKMIDSKGNWRKLMGLFRK 606
+ LL Y G +A E + S G W K M L R+
Sbjct: 615 SSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRR 670
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 256/513 (49%), Gaps = 38/513 (7%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + N ++M+ K G LG A+ VF ++ +RD SWN +I + ++ A+ + R+
Sbjct: 46 SVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAF-RLM 104
Query: 189 WVGGVKPDVYTFPCVLRTCGGV---PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G +P +T + C + L GK++H R G+ NAL+ MY K
Sbjct: 105 LMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN-NALMAMYAKL 163
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G L A+ + RD ++WN+MIS + +N +M+ LM +M V PD +T +SV+
Sbjct: 164 GRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVL 223
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVS----VCNPLIKMYLSFGNREEGEKVFSRMES 361
A + + G+E+H Y ++ +DDV V + L+ MY + G E G VF +
Sbjct: 224 PACSHLDLLRTGKEIHAYALR---TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSACACLGNLDLGIK 420
+ + W MI+ Y S +KA+ + ME A G + T++S++ A +
Sbjct: 281 RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG 340
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ GL + + N LIDMYS+ I + +F + D++++SW +II + R
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400
Query: 481 SFEALIFFRKM-----------------MLNLKPNSVTLVSILSACARIGALMCGKEIHA 523
S +AL+ +M + KPNS+TL+++L CA + AL GKEIHA
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
+A+R +A + +AL+DMY +CG + A F+ R+V WN+++ Y G+G
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE 520
Query: 583 AEEFFRKMI--DSKGNWRK-----LMGLFRKCQ 608
+ E F M+ +KG K + LF C
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCS 553
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 216/408 (52%), Gaps = 10/408 (2%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA--DVDVVNALITMYVKCGDLV 249
G PD + FP VL+ G+ +L GK++H HV +FGY + V + N L+ MY KCG L
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISAS 308
A VFD + +RD++SWN++IS E+ + F +M+ E F +S ++ S
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 309 ELVGDEK--LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
L + LG+++HG + G S N L+ MY G ++ + + E +D+V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W +MIS + + +A+ ++M EG PD +T ASVL AC+ L L G ++H A+
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243
Query: 427 RT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
RT +I + + L+DMY C ++ VF + D+ + W ++I G + +AL
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303
Query: 486 IFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ F +M L N+ T+ SI+ A R + + IH + ++ G+ + +L NAL+DM
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDM 363
Query: 544 YVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
Y R G +K + F+S E RD+ +WN ++T Y G+ + A +M
Sbjct: 364 YSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEM 411
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 162/308 (52%), Gaps = 9/308 (2%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGE 353
PD +V+ A + + LG+++H +V K G+ V++ N L+ MY G +
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF R+ +D VSW ++IS + A++ +++M EG P T+ S+ AC+ L
Sbjct: 68 KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLR 127
Query: 414 NLD---LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
D LG ++H R G N L+ MY+K +D A + D+++++W S
Sbjct: 128 KRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNS 186
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I N R EAL+F R M+L +KP+ VT S+L AC+ + L GKEIHA+ALR
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD 246
Query: 530 -VAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFF 587
V + F+ +AL+DMY CG+++ F+S +R + WN ++ GYA+ A F
Sbjct: 247 DVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLF 306
Query: 588 RKMIDSKG 595
+M + G
Sbjct: 307 IEMEAAAG 314
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY--IIIANTLIDMYSKC 447
M G PD +VL A A + L LG ++H + G S+ + I NTL++MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
+ A +VF +I +++ +SW SII L A+ FR M++ +P+S TLVS+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 507 SACARI---GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-R 562
AC+ + L GK+IH R G + F NAL+ MY + GR+ A + E R
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMI 591
D+ WN +++ +++ + A F R M+
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMV 208
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 253/501 (50%), Gaps = 15/501 (2%)
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
L + + G G LH + K + A + M+ + G L A VF +M D
Sbjct: 103 LPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVC 162
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHV 221
N+LI ++AG +++ L++ M G + P T VL C + L+ G+ +H
Sbjct: 163 RNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHG 222
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVR---ARLVFDGMPKRDRISWNAMISGYFENGE 278
+VI+ G E D NAL++MY KCG + A L F + +D +SWN++I+GY ENG
Sbjct: 223 YVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGL 282
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDVSVCN 337
+ + L LF M P++ TL++V+ LV G+E+HG+V++ G D+SV N
Sbjct: 283 FEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSN 342
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ Y E +F + D+V+W T+I+ Y + P +A++ +Q + G P
Sbjct: 343 ALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAP 402
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMR-TGLISYIIIANTLIDMYSKCKCIDKALEV 456
D +++ S+L+ACA +GNL +GI++H R L+ + N L+ YS+C D A
Sbjct: 403 DSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRS 462
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFR---KMMLNLKP-NSVTLVSILSACARI 512
F I +K+ +SW +I+ + E FFR +M ++ +SVT+++I+
Sbjct: 463 FITIQNKDSVSWNAILSACANSEHHIEQ--FFRLLGEMWHDVTQWDSVTILNIIRMSTFC 520
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G M +E H ++LR+G D + NA+LD Y +CG + A F S R++ N ++
Sbjct: 521 GIKMV-QESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMI 579
Query: 572 TGYAERGQGALAEEFFRKMID 592
+ Y + AE F M +
Sbjct: 580 SCYLKNNCVEDAEMTFNHMAE 600
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 269/579 (46%), Gaps = 54/579 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
NG E+AL M + L N++ C E+ R Y G +H V + +
Sbjct: 280 NGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHY--GKEIHGFVVRHGLEMD 337
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA ++ + K ++ +F D+ +WN +I GY + AL L+Q + +
Sbjct: 338 ISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLF 397
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
G+ PD + +L C V +L+ G VH ++ R + ++NAL++ Y +C
Sbjct: 398 -AGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 456
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVI 305
A F + +D +SWNA++S + +++ F ++ E+ D D +T+ ++I
Sbjct: 457 DAAFRSFITIQNKDSVSWNAILSACANSEHHIE--QFFRLLGEMWHDVTQWDSVTILNII 514
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S G K+ +E HGY +++G++ D SV N ++ Y G + E +F + +++V
Sbjct: 515 RMSTFCG-IKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIV 573
Query: 366 SWTTMISCY-------------------------------EGSVLPDKAVETYQMMEAEG 394
+ TMISCY + L D+A + +++EG
Sbjct: 574 TGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEG 633
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD I+I ++LSAC L ++ L + H +R L I + L+D YSKC I A
Sbjct: 634 LNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAY 692
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F K+++ +T++I ++ + +A+ F KM+ L++KP+ V L ++LSAC+ G
Sbjct: 693 NLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAG 752
Query: 514 ALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSAWNI 569
+ G +I I GV ++D+ R GR++ A++ + + +AW
Sbjct: 753 LVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGS 812
Query: 570 LLTGYAERGQ---GAL-AEEFFRKMIDSKGNWRKLMGLF 604
LL G+ G L A+ F + GN+ + +F
Sbjct: 813 LLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIF 851
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 14/352 (3%)
Query: 254 VFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV- 311
VFD +P DR+ +A++ G++ L M + P+ + L++ + +S +
Sbjct: 45 VFDAVPALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALP 104
Query: 312 ---GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G LGR +HG +K+G++D V ++ MY G+ + VF M D V
Sbjct: 105 DCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRN 164
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEG---SMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+I+ + L + ++ M A G SMP +T+A VL CA L L G +H
Sbjct: 165 ILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYV 224
Query: 426 MRTGLISYIIIANTLIDMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
++TGL + N L+ MY+KC +D A F I K+V+SW SII G N
Sbjct: 225 IKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFE 284
Query: 483 EALIFFRKMML-NLKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNAL 540
EAL F +M+ PN TL ++L C+ + GKEIH +R G+ D + NAL
Sbjct: 285 EALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNAL 344
Query: 541 LDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ Y + M+ + F S++ D+ WN ++ GY + A + F+ ++
Sbjct: 345 MAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLL 396
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 390 MEAEGSMPDEITIASVLSACA----CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
M A G P+ + +A+ + + + C G LG LH LA++ G ++A ++DMY
Sbjct: 81 MLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYG 140
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN----LKPNSVT 501
+ + A VF ++ + + +I + FR M+ + P +VT
Sbjct: 141 RIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVT 200
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG---RMKPAWNQFN 558
+ +L CA++ L G+ IH + ++ G+ FD NAL+ MY +CG M A F+
Sbjct: 201 VAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFS 260
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKCQ 608
+ +DV +WN ++ GY+E G A F +MI + N+ L + C
Sbjct: 261 TICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCS 313
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 225/428 (52%), Gaps = 15/428 (3%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D+ T L++C +L +GKE+H H+++ + + +LI MY KC + + VF
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 256 DGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+ ++ ++NA+I+G+ N + L L+ MR + + PD T VI A D
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDD 147
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ ++HG + K+G DV V + L+ YL F E +VF + +DVV W M++
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNG 207
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ ++A+ ++ M G +P T+ VLS + +G+ D G +H + G S
Sbjct: 208 FAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESG 267
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++++N LIDMY KCKC+ AL VF + + ++ SW SI+ + L F +MM
Sbjct: 268 VVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMG 327
Query: 494 N--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA-------FDG-FLPNALLDM 543
+ ++P+ VT+ ++L AC + ALM G+EIH + + G+A FD L NAL+DM
Sbjct: 328 SSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDM 387
Query: 544 YVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWRKL 600
Y +CG M+ A F N E+DV++WNI++TGY G G A + F +M ++ N
Sbjct: 388 YAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISF 447
Query: 601 MGLFRKCQ 608
+GL C
Sbjct: 448 VGLLSACS 455
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 255/526 (48%), Gaps = 26/526 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D + ++ C +G LH+ + K S + ++M+ K + H+ VF
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 154 G--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
++++F++N LI G+ AL+LY +M +G + PD +TFPCV+R CG
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLG-IAPDKFTFPCVIRACGDDD 146
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D ++H + + G E DV V +AL+ Y+K + A VF+ +P RD + WNAM++
Sbjct: 147 DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVN 206
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G+ + G + + L +F M V P T++ V+S ++GD GR VHG+V KMG+
Sbjct: 207 GFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYES 266
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMM 390
V V N LI MY + VF M+ D+ SW +++S +E + + +MM
Sbjct: 267 GVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMM 326
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL--------ISYIIIANTLID 442
+ PD +T+ +VL AC L L G ++H + GL +++ N L+D
Sbjct: 327 GSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMD 386
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVT 501
MY+KC + A VF + +K+V SW +I G ++ EAL IF R + PN ++
Sbjct: 387 MYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEIS 446
Query: 502 LVSILSACARIGALMCG----KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
V +LSAC+ G + G E+ + + GV+ ++DM R G++ A++
Sbjct: 447 FVGLLSACSHAGMVKEGLGFLSEMES---KYGVSPSIEHYTCVIDMLCRAGQLMEAYDLV 503
Query: 558 NSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMI----DSKGNW 597
+ + D W LL LAE K+I D GN+
Sbjct: 504 LTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNY 549
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 240/462 (51%), Gaps = 15/462 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ ++M+ K + A +F ++F++N +I G+ GF +E YQ+M G
Sbjct: 76 TSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM-RNEG 134
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD +TFPC ++ C V ++K+ +H + +FG E DV + +AL+ Y+K G + A+
Sbjct: 135 VIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ F+ +P RD + WNAM++GY + G++ L F M + V P T++ V+S ++G
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMG 251
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR +HG+ +KMG+ V+V N LI MY E+ ++F M KD+ SW +++S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-- 430
+E D + M G PD +T+ +VL AC+ L L G ++H + +GL
Sbjct: 312 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGK 371
Query: 431 ----ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
I +++ N +IDMY+KC + A VF ++ +K+V SW +I+G ++ EAL
Sbjct: 372 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALE 431
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMY 544
F +M + LKP+ VT V +LSAC+ G + G+ + VA ++DM
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 545 VRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
R G++ A+ + E + W LL LAE
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 533
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 219/407 (53%), Gaps = 14/407 (3%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF-DGMPKRDRISWNAMI 270
+L +GKE+H +++ G+ + +LI MY KC + A +F D + + ++NA+I
Sbjct: 52 NLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAII 111
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
SG+ NG +G + MR V PD T I A V + K ++HG + K G
Sbjct: 112 SGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLE 168
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
DV + + L+ YL FG E + F + +DVV W M++ Y + +ET++ M
Sbjct: 169 LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRM 228
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
E +P T+ VLS A +G+L+ G +H AM+ G S + ++N+LIDMY KCKCI
Sbjct: 229 NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 288
Query: 451 DKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSAC 509
+ ALE+F + +K++ SW SI+ + + + + R + ++P+ VT+ ++L AC
Sbjct: 289 EDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPAC 348
Query: 510 ARIGALMCGKEIHAHALRIGVAFDG------FLPNALLDMYVRCGRMKPAWNQFNS-NER 562
+ + ALM G+EIH + + G+ DG L NA++DMY +CG M+ A F + +
Sbjct: 349 SHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
DV++WNI++ GY G G A E F +M + K + +G+ C
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 21/446 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHS 119
N+ ++ NG E+ ++ M+ + D+ ++ C E K+ +H
Sbjct: 108 NAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK-------IHG 160
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
++ K L V +G+A ++ ++KFG + HA F ++ RD+ WN ++ GYA+ G F+
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++RM V P +T VL + DL G+ +H ++ GY++ V V N+LI
Sbjct: 221 VLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A +F+ M ++D SWN+++S + + G++ L L M + PD +
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS------DDVSVCNPLIKMYLSFGNREEGE 353
T+++V+ A + GRE+HGY+I G DDV + N +I MY G+ +
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF RM +KDV SW MI Y ++A+E + M PDE+T VLSAC+ G
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 459
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
+ G L Q+ + + I +IDM + +D+A E+ +P + N + W ++
Sbjct: 460 FVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP 497
+ RL+ + A + ++ + L+P
Sbjct: 520 LAACRLHKHAVLAEVAAQR-VFELEP 544
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF--- 457
T + L A A NL G ++H + G ++ + +LI+MYSKC ++ AL +F
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 458 -HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
H+I NV ++ +II G N E F++KM + P+ T + AC + +
Sbjct: 99 THEI---NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI 155
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
K+IH + G+ D F+ +AL++ Y++ G M+ A F RDV WN ++ GY
Sbjct: 156 ---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 575 AERGQGALAEEFFRKMID 592
A+ GQ + E FR+M D
Sbjct: 213 AQIGQFEMVLETFRRMND 230
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N T ++ L A A L GKEIH++ L G +L++MY +C +M A + F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 558 N--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++E +V A+N +++G+ G EF++KM
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM 130
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 243/468 (51%), Gaps = 17/468 (3%)
Query: 121 VSKTMSHLS-------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
V + +HL+ V + + L++++K G + A +F +M +RD WN LI GY++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ +A L+ M G P T +L CG + +G+ VH + G E D
Sbjct: 129 NGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NALI+ Y KC +L A ++F M + +SWN MI Y ++G + + +F M E
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+ +T+ +++SA V E L H V+K G +D+SV L+ Y G E
Sbjct: 248 VEISPVTIINLLSAH--VSHEPL----HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++++ + +V T+++SCY D AV + D + + +L C
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++D+G+ LH A+++GL + ++ N LI MYSK ++ L +F Q+ + +ISW S+I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 474 GLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + R+ A F +MML L P+++T+ S+L+ C+++ L GKE+H + LR
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERG 578
+ F+ AL+DMY +CG A + F S + +A WN +++GY+ G
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 218/449 (48%), Gaps = 9/449 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A K M + LVNL+ C +G +H V +K+ L ++
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +S + K +LG A +F +M D+ SWN +IG Y+++G +EA+++++ MF
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF---- 244
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ +V P + + + +H V++ G D+ VV +L+ Y +CG LV A
Sbjct: 245 -EKNVEISPVTIINL--LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ + + +++S Y E G+ ++ F R++ + D + L ++ +
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+G +HGY IK G V N LI MY F + E +F +++ ++SW ++IS
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 373 CYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S A E + QMM G +PD ITIAS+L+ C+ L L+LG +LH +R
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + LIDMY+KC +A VF I +W S+I G L+ AL + +M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGK 519
LKP+ +T + +LSAC G + GK
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGK 570
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 8/381 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
++V H+ + G + V V +L+ +Y+K G + A+++FD MP+RD + WNA+I GY N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G LFI+M + P TL +++ G GR VHG K G D V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI Y E +F M+ K VSW TMI Y S L ++A+ ++ M +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+TI ++LSA LH L ++ G+++ I + +L+ YS+C C+ A +
Sbjct: 250 ISPVTIINLLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGAL 515
+ +++ TSI+ A+++F K L +K ++V LV IL C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G +H +A++ G+ + N L+ MY + ++ F E + +WN +++G
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 575 AERGQGALAEEFFRKMIDSKG 595
+ G+ + A E F +M+ + G
Sbjct: 424 VQSGRASTAFEVFHQMMLTGG 444
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 8/361 (2%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+T + N+ + +G E+A+ +M E N+ + ++NL+ + LH
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL------SAHVSHEPLH 269
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+V K + + + + + + G L A ++ + ++ YA+ G D
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A+ + + + +K D +L C + G +H + I+ G VVN L
Sbjct: 330 IAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPD 297
ITMY K D+ +F+ + + ISWN++ISG ++G +F MM + PD
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+T++S+++ + LG+E+HGY ++ F ++ VC LI MY GN + E VF
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+++ +W +MIS Y S L +A+ Y M +G PDEIT VLSAC G +D
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 418 G 418
G
Sbjct: 569 G 569
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ A+ Y ++L + +D ALV ++ C+ D G+ LH K+ +
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++M+ KF D+ ++F ++ + L SWN +I G ++G A ++ +M GG+
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T +L C + L GKE+H + +R +E + V ALI MY KCG+ V+A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + +WN+MISGY +G + L ++ MRE + PD +T V+SA
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN---- 561
Query: 314 EKLGREVHGYVIKMGFSDDVSVC 336
HG GF D+ +C
Sbjct: 562 -------HG-----GFVDEGKIC 572
>gi|218188563|gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indica Group]
Length = 952
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 268/527 (50%), Gaps = 10/527 (1%)
Query: 75 SLEQALKYLDSMQELNICVDE-DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
+L +A++Y DS EL +L+ L G + L++ + S S L V G
Sbjct: 258 TLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYV--G 315
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A +S F + G L A ++ + +R+ + N LI G K + A ++ V
Sbjct: 316 SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 375
Query: 194 KPDVYT--FPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVR 250
D Y + L++G+EVH HV+R G+ + V N L+ MY KCG + +
Sbjct: 376 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIGK 435
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF M RDRISWN +I+ +NG +M + +MR+ + P S +S+
Sbjct: 436 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 495
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G G+++H +K G D S+ N L+KMY G E ++F+ M + DVVSW ++
Sbjct: 496 LGLLAAGQQLHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 555
Query: 371 ISCYEGSVLP-DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+ S P ++V+ + M G +P+++T + L+A L L+LG ++H + ++ G
Sbjct: 556 MGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHG 615
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFF 488
+ + N L+ Y+K +D +F ++ ++ ISW S+I G N EA+
Sbjct: 616 VTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCV 675
Query: 489 RKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
MML+ + + T +L+ACA + AL G E+HA LR + D + +AL+DMY +C
Sbjct: 676 WLMMLSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 735
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
GR+ A F+S ++++ +WN +++GYA G G A E F +M +S
Sbjct: 736 GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQES 782
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 252/500 (50%), Gaps = 23/500 (4%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L+L +V + ++H + L N ++ + K L A VF M R+ SW LI G+
Sbjct: 84 ESLHL-EIVKRGLTH-DLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVSWTCLISGHV 141
Query: 173 KAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH--VIRFGYE 229
+G ++A L++ M G G +P +TF VLR C + G V VH V + +
Sbjct: 142 LSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFT 201
Query: 230 ADVDVVNALITMYVKC--GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ V NALI+MY C G + A+ VFD P RD I+WNA++S Y + G+ + LF
Sbjct: 202 SNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKGDAICTFTLFR 261
Query: 288 MMR----EVLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
M+ + + P T S+I+A+ L L ++ V+K G S D+ V + L+
Sbjct: 262 AMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 321
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
+ G +E + ++ ++ ++ V+ +I+ + A E + M + + + T
Sbjct: 322 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDTY 380
Query: 403 ASVLSACACLGNLDLGIK----LHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVF 457
+LSA A + G++ +H +R G I I ++N L++MY+KC I KA VF
Sbjct: 381 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIGKACRVF 440
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ ++ ISW +II L N A++ + M N + P++ +S LS+CA +G L
Sbjct: 441 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 500
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+++H A++ G+ D + NAL+ MY CGRM W FNS + DV +WN ++ G
Sbjct: 501 AGQQLHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM-GVM 559
Query: 576 ERGQGALAE--EFFRKMIDS 593
Q + E + F M+ S
Sbjct: 560 ASSQAPITESVQVFSNMMKS 579
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 256/503 (50%), Gaps = 30/503 (5%)
Query: 100 NLVRLCEWKRGYDE---GLYLHSVVSKTMSHLSVRLGNAFLSMF--VKFGDLGHAWYVFG 154
+++R C+ G D + +H +VSKT + + NA +SM+ G A VF
Sbjct: 172 SVLRACQ-DSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFD 230
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG---VKPDVYTFPCV-----LRT 206
RDL +WN L+ YAK G +L++ M + ++P +TF + L +
Sbjct: 231 TTPVRDLITWNALMSVYAKKGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSS 290
Query: 207 CG-GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C G+ D ++ V V++ G +D+ V +AL++ + + G L A+ ++ G+ +R+ ++
Sbjct: 291 CSLGLLD-----QLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVT 345
Query: 266 WNAMISGYFENGEYMKGLMLFIMMRE---VLVDPDFMTLSSVISASELVGDEKLGREVHG 322
N +I+G + +F+ R+ V VD + LS++ S + GREVH
Sbjct: 346 LNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHA 405
Query: 323 YVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+V++ G ++V N L+ MY G + +VF ME++D +SW T+I+ + + +
Sbjct: 406 HVLRAGHIYRKIAVSNGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCE 465
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
A+ Y +M P S LS+CA LG L G +LH A++ GL I+N L+
Sbjct: 466 AAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSISNALV 525
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS--FEALIFFRKMMLN-LKPN 498
MY +C + + E+F+ + +V+SW S I+G+ ++++ E++ F MM + L PN
Sbjct: 526 KMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGLVPN 584
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
VT V+ L+A + L GK+IH+ L+ GV D + NAL+ Y + G + F+
Sbjct: 585 KVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFS 644
Query: 559 --SNERDVSAWNILLTGYAERGQ 579
S RD +WN +++GY G
Sbjct: 645 RMSGRRDAISWNSMISGYIYNGH 667
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 165/342 (48%), Gaps = 7/342 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L NG E A+ M++ +I A ++ + C G LH K
Sbjct: 452 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 511
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALS 182
+L + NA + M+ + G + W +F M D+ SWN ++G A + E++
Sbjct: 512 WGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQ 571
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G+ P+ TF L + L+ GK++H +++ G D V NAL++ Y
Sbjct: 572 VFSNMM-KSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCY 630
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGL--MLFIMMREVLVDPDFM 299
K GD+ +F M +RD ISWN+MISGY NG + + + +M+ E ++D
Sbjct: 631 AKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVWLMMLSEQMMD--HC 688
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T S V++A V + G E+H + ++ DV V + L+ MY G + KVF M
Sbjct: 689 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM 748
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
K+ SW +MIS Y L KA+E ++ M+ G PD +T
Sbjct: 749 SQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVT 790
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 175/645 (27%), Positives = 287/645 (44%), Gaps = 88/645 (13%)
Query: 10 SQTPLRQNLRNPKTRIPETSFYFKP--KTRHFSSKNAQSVQV-LNTQNTSSI--ATKNPN 64
S L QN + F KP KT+ FS + + + ++ T +I + N
Sbjct: 11 SPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYN 70
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK- 123
+++ C G LE A++ + ++ + + ++++LC + + +G +HS++
Sbjct: 71 AKILHFCQLGDLENAMELICMCKKSEL--ETKTYSSVLQLCAGLKSFTDGKKVHSIIKSN 128
Query: 124 ------------------------------TMSHLSVRLGNAFLSMFVKFGDLGH----- 148
TM +V L N +S + K GD
Sbjct: 129 SVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 149 ---------------AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A+ +F K+CDRD+ SWN +I GY G + L +Y++M ++G +
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-I 247
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D+ T VL C L GK VH I+ +E ++ N L+ MY KCGDL A
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M +R+ +SW +MI+GY +G + L M + V D + ++S++ A G
Sbjct: 308 VFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGS 367
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G++VH Y+ ++ VCN L+ MY G+ E VFS M KD++SW TMI
Sbjct: 368 LDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE 427
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ PD T+A VL ACA L L+ G ++H +R G S
Sbjct: 428 LK---------------------PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSD 466
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+AN L+D+Y KC + A +F IP K+++SWT +I G ++ EA+ F +M
Sbjct: 467 RHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD 526
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++P+ V+ +SIL AC+ G L G I + I + + ++D+ R G
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA--CMVDLLSRTGN 584
Query: 550 MKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ + D + W LL G LAE+ ++ +
Sbjct: 585 LSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFE 629
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 223/488 (45%), Gaps = 75/488 (15%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D + +N I + + G + A+ L + + + T+ VL+ C G+ GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL---ICMCKKSELETKTYSSVLQLCAGLKSFTDGK 119
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK----------------- 260
+VH + D + L++ Y CGDL R VFD M K
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 261 ----------------------------------RDRISWNAMISGYFENGEYMKGLMLF 286
RD ISWN+MISGY NG +GL ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + +D D T+ SV+ G LG+ VH IK F ++ N L+ MY
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ + +VF +M ++VVSWT+MI+ Y D A++ Q ME EG D + I S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA G+LD G +H + S + + N L+DMY+KC ++ A VF + K++I
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDII 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
SW + M+ LKP+S T+ +L ACA + AL GKEIH + L
Sbjct: 420 SWNT--------------------MIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R G + D + NAL+D+YV+CG + A F+ +D+ +W +++ GY G G A
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 586 FFRKMIDS 593
F +M D+
Sbjct: 520 TFNEMRDA 527
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 262/512 (51%), Gaps = 48/512 (9%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F+ + + +A VF ++ D I Y++ +EAL + M V+
Sbjct: 36 FIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQ-NNVRI 94
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+T P + ++C + + GK+VH VIR+G+ + V NALI Y K DL A L+F
Sbjct: 95 VCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIF 154
Query: 256 DGM-----------------------------PKRDR--ISWNAMISGYFENGEYMKGLM 284
DG+ RDR +SWNAMIS Y +NG+Y KG +
Sbjct: 155 DGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWI 214
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+F M++ + +P+ +TL++V+S +GD ++G + ++ V +++MY+
Sbjct: 215 IFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYV 274
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G ++G VF M +DVV+W+ MI+ Y + ++A+E ++ M++ P+++T+ S
Sbjct: 275 KCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVS 334
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VLSACA LG+++ G ++ GLIS + +A+ L+ MYSKC I KA ++F ++P ++
Sbjct: 335 VLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRD 394
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
++W S+I+GL +N + +A+ + +M + +KPN++T V +++AC G + G E
Sbjct: 395 NVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEF-- 452
Query: 524 HALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQF--NSNERDVSAWNILLTGYAE 576
R + PN ++D++ R GR+ A+ E +V W LL+
Sbjct: 453 --FRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRI 510
Query: 577 RGQGALAEEFFRKMI----DSKGNWRKLMGLF 604
LAE +K++ D+ GN+ L ++
Sbjct: 511 HLNVELAELAGKKLLELEPDNSGNYVILSNIY 542
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 224/471 (47%), Gaps = 39/471 (8%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ SM + N+ + + + + C D G +HS+V + H SV NA +
Sbjct: 79 EALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALI 138
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM------FWVG 191
+ + K DLG A +F + +D ++N LI Y+++G A L+ +M W
Sbjct: 139 NFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNA 198
Query: 192 GV------------------------KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+ +P+ T VL C + DL+ G +
Sbjct: 199 MISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKN 258
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+++ V A++ MYVKCG + RLVFD M +RD ++W+AMI+GY +NG + L LF
Sbjct: 259 LGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFE 318
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M+ + P+ +TL SV+SA +G + G + YV G +V V + L+ MY G
Sbjct: 319 NMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCG 378
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
N + ++F ++ +D V+W +MI + + A+ Y M+ P+ IT +++
Sbjct: 379 NIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMT 438
Query: 408 ACACLGNLDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKN 464
AC G+++LG++ + +MR+ + I ++D++ + + A E ++ + N
Sbjct: 439 ACTHAGHVELGLEFFR-SMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPN 497
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
V+ W +++ R+ + + E K +L L+P N V L +I ++ R
Sbjct: 498 VVIWGTLLSASRI-HLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGR 547
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 150/302 (49%), Gaps = 3/302 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + MQ+ +E L ++ +C + GL + + ++ +
Sbjct: 206 NGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIV 265
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+VK G + VF M RD+ +W+ +I GYA+ G +EAL L++ M
Sbjct: 266 STAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENM-KSAQ 324
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T VL C + ++ G+ + +V G ++V V +AL+ MY KCG++++AR
Sbjct: 325 IKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKAR 384
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD +P+RD ++WN+MI G NG + L+ M+E+ V P+ +T +++A G
Sbjct: 385 QIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAG 444
Query: 313 DEKLGRE-VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
+LG E S ++ ++ ++ G + + RME + +VV W T+
Sbjct: 445 HVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTL 504
Query: 371 IS 372
+S
Sbjct: 505 LS 506
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP--DKNV-ISWTSIILGLRLNNRSFEALI 486
+I Y+ + I I A +VF QIP D+ V S+ + L LNN + +
Sbjct: 26 IIKYLSLTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFV 85
Query: 487 FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ N++ T+ I +CA + A+ GK++H+ +R G F NAL++ Y +
Sbjct: 86 SMHQN--NVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAK 143
Query: 547 CGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMID-SKGNWRKLMGLF 604
+ A F+ +D A+N L++ Y+ G+ A E F KM D S +W ++ +
Sbjct: 144 INDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCY 203
Query: 605 RK 606
+
Sbjct: 204 AQ 205
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 243/488 (49%), Gaps = 42/488 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + A+ LY M +G + P+ YTFP
Sbjct: 50 FDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLG-LLPNSYTFPF 108
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG----- 257
+L++C + K G+++H HV++ GYE D+ V +LI+MYVK G A VFDG
Sbjct: 109 LLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRD 168
Query: 258 --------------------------MPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+P +D +SWNA+ISGY + G + L LF M +
Sbjct: 169 VVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK 228
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR+VH ++ G ++ + N LI +Y G E
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + +KDV+SW TMI Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQ 348
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D G +H + G+ + + +LIDMY+KC I+ A +VF+ + + + +
Sbjct: 349 LGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQN 468
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALA 583
+I + + ++D+ G K A N + E D W LL G L
Sbjct: 469 YKITPKLEHY--GCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELG 526
Query: 584 EEFFRKMI 591
E F +K+I
Sbjct: 527 ESFAQKLI 534
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 19/332 (5%)
Query: 108 KRGYDEGLYLH-SVVSKTM---------------SHLSVRLGNAFLSMFVKFGDLGHAWY 151
K GY+ LY+H S++S + SH V A ++ + G + A
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F ++ +D+ SWN +I GYA G EAL L++ M VKPD T V+ C
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN-VKPDESTMVTVVSACAQSG 249
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
++ G++VH + G +++ +VNALI +Y KCG++ A +F G+ +D ISWN MI
Sbjct: 250 SIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIG 309
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGF 329
GY Y + L+LF M +P+ +T+ S++ A +G GR +H Y+ K G
Sbjct: 310 GYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGV 369
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ S+ LI MY G+ E +VF+ M + + + MI + + A + +
Sbjct: 370 TNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSR 429
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
M G PD+IT +LSAC+ G LDLG ++
Sbjct: 430 MRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 164/370 (44%), Gaps = 39/370 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G+ ++AL M + N+ DE +V +V C G +HS + ++++
Sbjct: 214 GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIV 273
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + ++ K G++ A +F + ++D+ SWN +IGGY + EAL L+Q M G
Sbjct: 274 NALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLR-SGE 332
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITMYVKCGDLVRA 251
P+ T +L C + + G+ +HV++ + G + +LI MY KCGD+ A
Sbjct: 333 NPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAA 392
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M R + NAMI G+ +G +F MR+ ++PD +T ++SA
Sbjct: 393 HQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHS 452
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR + F + + K+ ++E + MI
Sbjct: 453 GMLDLGRRI-------------------------FRSMTQNYKITPKLE-----HYGCMI 482
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--- 428
L +A E M E PD + S+L AC GN++LG Q ++
Sbjct: 483 DLLGHLGLFKEAEEMINTMTME---PDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539
Query: 429 GLISYIIIAN 438
SY++++N
Sbjct: 540 NPGSYVLLSN 549
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 36/315 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMISCY 374
R +H +IK G + + L++ + +F VF ++ +++ W TM +
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S P A++ Y M + G +P+ T +L +CA L G ++H ++ G +
Sbjct: 79 ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138
Query: 435 IIANTLIDMYSKCK-------------------------------CIDKALEVFHQIPDK 463
+ +LI MY K I+ A ++F +IP K
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
+V+SW +II G + EAL F++MM N+KP+ T+V+++SACA+ G++ G+++H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGA 581
+ G+ + + NAL+D+Y +CG ++ A F + +DV +WN ++ GY
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318
Query: 582 LAEEFFRKMIDSKGN 596
A F++M+ S N
Sbjct: 319 EALLLFQEMLRSGEN 333
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID---MYSKCKCIDKALEVFHQI 460
S+L C L +L + +H ++TGL + + L++ + + A+ VF I
Sbjct: 7 SLLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
+ N++ W ++ G L++ A+ + M+ L L PNS T +L +CA++ G+
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERG 578
+IH H L++G D ++ +L+ MYV+ GR K A F+ S+ RDV ++ L+TGYA RG
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183
Query: 579 QGALAEEFFRKM 590
A++ F ++
Sbjct: 184 YIESAQKMFDEI 195
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 230/454 (50%), Gaps = 6/454 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + + + G+ G A V M R+ F+WN I G +G F EAL Y M G
Sbjct: 77 LAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDG 136
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGK----EVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V D +T+P V++ C + +++G+ V V+R V V AL+ M+ KCG
Sbjct: 137 SVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGC 196
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L AR VF+ M +RD +W AMI G G+++ + LF MR D + +++VI A
Sbjct: 197 LGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPA 256
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + G +HG ++ G DD V N L+ MY G ++VF + KDVVSW
Sbjct: 257 CGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSW 316
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+T+I+ Y + +V + M G P+ T+AS+L + + + G ++H ++R
Sbjct: 317 STLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLR 376
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + + ID YS+ I +A V +P ++++ W S++ G +N + AL
Sbjct: 377 NGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCA 436
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
FR + + +P+ VT+VS+L C L+ GKE+HA+ +R ++ + NAL+DMY +
Sbjct: 437 FRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCK 496
Query: 547 CGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQ 579
C ++ F +RD + +N L++ + + G
Sbjct: 497 CCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGH 530
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 233/444 (52%), Gaps = 4/444 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + A + MF K G LG A VF M +RDL +W +IGG AG + +A+SL+ RM
Sbjct: 180 SVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRM- 238
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G D V+ CG +L+ G +H +R G D V NAL+ MY KCG L
Sbjct: 239 RSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCL 298
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF + +D +SW+ +I+GY +NG+ + LF M + P+ T++S++ +
Sbjct: 299 GMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSL 358
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ + G+E+HG+ ++ GF + + I Y G+ E E V M +D+V W
Sbjct: 359 SEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWN 418
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+M++ Y + D A+ ++ ++ G PD +T+ SVL C L G +LH +R
Sbjct: 419 SMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRH 478
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ S ++N LIDMY KC C++K E+F + D++ ++ ++I + EA++ F
Sbjct: 479 YMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLF 538
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVR 546
M + + P+ VT V++LS+C+ G + G + L+ ++ + ++D+Y R
Sbjct: 539 DLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSR 598
Query: 547 CGRMKPAWNQFNSNERDVSAWNIL 570
G++ AW +F S+ +D + ++L
Sbjct: 599 SGKLDDAW-KFVSSLQDEAEIDVL 621
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 200/397 (50%), Gaps = 15/397 (3%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA-LITMYVKCGDLVRARLVFDGMPKRD 262
LR+C P L + +H ++ G+ V+ A L+ Y + G+ RA V DGMP R+
Sbjct: 49 LRSC---PTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRN 105
Query: 263 RISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGR--- 318
+WNA I G ++G++ + L + M+R+ V D T VI A +G + GR
Sbjct: 106 SFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVR 165
Query: 319 -EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI--SCYE 375
V V++ + V V L+ M+ G E VF M +D+ +WT MI + +
Sbjct: 166 ENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHA 225
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
G L A+ + M +EG + D + IA+V+ AC L G+ LH A+R G+
Sbjct: 226 GDWL--DAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTC 283
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
++N L+DMY KC C+ A VF I K+V+SW+++I G N + ++ F +M+
Sbjct: 284 VSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAG 343
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
LKPNS T+ SIL + + + GKEIH +LR G FL +A +D Y R G ++ A
Sbjct: 344 LKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAE 403
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+RD+ WN ++ GYA G A FR +
Sbjct: 404 IVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRAL 440
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 11/413 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G A+ M+ D + ++ C + G+ LH + +
Sbjct: 226 GDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVS 285
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ K G LG A VF + +D+ SW+ LI GY++ G +++L+ M G+
Sbjct: 286 NALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMV-TAGL 344
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ T +L + + + GKE+H +R G++ + +A I Y + G + A +
Sbjct: 345 KPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEI 404
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + MPKRD + WN+M++GY NG L F +++V PD +T+ SV+
Sbjct: 405 VLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSR 464
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+E+H YV++ S SV N LI MY E+G+++F + +D ++ T+IS
Sbjct: 465 LIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISS 524
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS- 432
+ D+A+ + +M+ +G PD++T ++LS+C+ G ++ G+ + + ++ IS
Sbjct: 525 FGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISP 584
Query: 433 ----YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNR 480
Y + ++D+YS+ +D A + + D+ I +LG R++NR
Sbjct: 585 GKEHY----SCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNR 633
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ Y G V M ++ +W I S +A+ETY M +GS+
Sbjct: 81 LVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAA 140
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLA----MRTGLISYIIIANTLIDMYSKCKCIDKA 453
D T V+ ACA LG ++ G + + +R + + + L+DM++KC C+ +A
Sbjct: 141 DGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEA 200
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARI 512
VF + ++++ +WT++I G +A+ F +M +SV + +++ AC R
Sbjct: 201 RSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRA 260
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L G +H A+R GV D + NAL+DMY +CG + A F S +DV +W+ L+
Sbjct: 261 KELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLI 320
Query: 572 TGYAERGQGALAEEFFRKMIDS 593
GY++ G+ ++ F +M+ +
Sbjct: 321 AGYSQNGKDHVSVNLFTEMVTA 342
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 263/533 (49%), Gaps = 26/533 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHSVVSKTMSHL 128
NG ++ L ++ + + + ++R C + GY L V+ +
Sbjct: 328 NGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQ---ILGDVIKSGLDTS 384
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + N+ +SMF + + A VF M +RD SWN +I A G F+E+L + F
Sbjct: 385 SVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHF---F 441
Query: 189 WVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
W+ P D T +L CG LK G+ +H + + G E++V V N+L++MY + G
Sbjct: 442 WMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAG 501
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A LVF MP RD ISWN+M++ + E+G+Y ++L + M + +++T ++ +S
Sbjct: 502 SSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALS 561
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + EKL + VH +VI ++ + N L+ MY FG +E +KV M +DVV+
Sbjct: 562 ACYNL--EKL-KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVT 618
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLA 425
W +I + P+ ++ + +M EG + + ITI ++L C L G+ +H
Sbjct: 619 WNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHI 678
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ G + ++LI MY++C ++ + +F + +KN +W +I EAL
Sbjct: 679 VVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEAL 738
Query: 486 IFFRKMMLNLKPNSVTL--VSILSACARIGALMC---GKEIHAHALRIGVAFDGFLPNAL 540
F +M + + V L S A A IG L G+++H+ +++G D ++ NA
Sbjct: 739 KFIARM----RNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNAT 794
Query: 541 LDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+DMY +CG + + + R +WNIL++ A G A E F +M+D
Sbjct: 795 MDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLD 847
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 261/525 (49%), Gaps = 15/525 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL-YLHSVVSKTMSHLSVRL 132
G +A+++ M E + + ++V C+ EG +H V K +V +
Sbjct: 227 GWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFV 286
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L + G + A +F ++ + ++ SW L+ YA G E L++Y R G
Sbjct: 287 GTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIY-RHLRHNG 345
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRA 251
+ T V+RTCG D G ++ VI+ G + + V V N+LI+M+ + A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ M +RD ISWN++I+ NG + + L F MR D++T+S+++ A
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
K GR +HG + K G +V VCN L+ MY G+ E+ E VF M ++D++SW +M+
Sbjct: 466 QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMM 525
Query: 372 SCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ + E + +M++ +M + +T + LSAC L L + +H + +
Sbjct: 526 ASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYNLEKLKI---VHAFVIHFAV 581
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL---RLNNRSFEALIF 487
+II NTL+ MY K +D+A +V +P+++V++W ++I G + N + +A
Sbjct: 582 HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNL 641
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
R+ L N +T+V++L C L+ G IHAH + G D ++ ++L+ MY +
Sbjct: 642 MRRE--GLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQ 699
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG + + F+ ++ S WN + + A G G A +F +M
Sbjct: 700 CGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARM 744
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 251/479 (52%), Gaps = 14/479 (2%)
Query: 108 KRGYDE------GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++G+ E G LH++ K + + N ++M+ KFG + +A +VF KM DR+
Sbjct: 154 QKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRND 213
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG-KEVH 220
SWN +I G+ + G++ +A+ + MF GV P Y ++ C + G +++H
Sbjct: 214 ASWNNMISGFVRVGWYHKAMQFFCHMF-ENGVTPSSYVIASMVTACDRSGCMTEGARQIH 272
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+V++ G ++V V +L+ Y G + A +F+ + + + +SW +++ Y +NG
Sbjct: 273 GYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTK 332
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPL 339
+ L ++ +R + T+++VI + GD+ +G ++ G VIK G + VSV N L
Sbjct: 333 EVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSL 392
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I M+ ++ + EE +VF+ M+ +D +SW ++I+ + ++++ + M D
Sbjct: 393 ISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDY 452
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
ITI+++L AC +L G LH L ++GL S + + N+L+ MY++ + A VFH
Sbjct: 453 ITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHT 512
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCG 518
+P +++ISW S++ + + A++ +M+ K N VT + LSAC + L
Sbjct: 513 MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL--- 569
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
K +HA + V + + N L+ MY + G M A ERDV WN L+ G+A+
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHAD 628
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 200/383 (52%), Gaps = 4/383 (1%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK +H ++ + + N L+ MY K G + A+ VFD M R+ SWN MISG+
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG-REVHGYVIKMGFSDDVS 334
G Y K + F M E V P ++S+++A + G G R++HGYV+K G +V
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ Y + G+ E K+F +E ++VSWT+++ CY + + + Y+ + G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKA 453
+ T+A+V+ C G+ +G ++ +++GL S + +AN+LI M+ +++A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARI 512
VF+ + +++ ISW SII N R E+L FF + K + +T+ ++L AC
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
L G+ +H + G+ + + N+LL MY + G + A F++ RD+ +WN ++
Sbjct: 466 QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMM 525
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
+ E G+ + A +M+ ++
Sbjct: 526 ASHVEDGKYSHAILLLVEMLKTR 548
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 12/455 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG E++L + M+ + D + L+ C + G LH +++K
Sbjct: 421 NSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V + N+ LSM+ + G A VF M RDL SWN ++ + + G + A+ L
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILL 540
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
M V TF L C +L++ K VH VI F ++ + N L+TMY
Sbjct: 541 LVEMLKTRKAMNYV-TFTTALSAC---YNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYG 596
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT--- 300
K G + A+ V MP+RD ++WNA+I G+ ++ + + F +MR + +++T
Sbjct: 597 KFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVN 656
Query: 301 -LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
L + +S L+ K G +H +++ GF D V + LI MY G+ +F +
Sbjct: 657 LLGTCMSPDYLL---KHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVL 713
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+K+ +W + S ++A++ M +G D+ + + L+ L LD G
Sbjct: 714 ANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQ 773
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+LH ++ G + N +DMY KC ID + ++ SW +I L +
Sbjct: 774 QLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHG 833
Query: 480 RSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+A F +M+ L LKP+ VT VS+LSAC+ G
Sbjct: 834 FFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGG 868
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 16/371 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK--- 173
+H+ V H ++ +GN ++M+ KFG + A V M +RD+ +WN LIGG+A
Sbjct: 572 VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKD 631
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEAD 231
+A +L +R G+ + T +L TC PD LK G +H H++ G+E D
Sbjct: 632 PNATIQAFNLMRRE----GLLSNYITIVNLLGTCMS-PDYLLKHGMPIHAHIVVAGFELD 686
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V ++LITMY +CGDL + +FD + ++ +WNA+ S G + L MR
Sbjct: 687 TYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRN 746
Query: 292 VLVDPDFMTLSSVIS--ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
VD D + S ++ + V DE G+++H ++IK+GF D V N + MY G
Sbjct: 747 DGVDLDQFSFSVALATIGNLTVLDE--GQQLHSWIIKLGFELDEYVLNATMDMYGKCGEI 804
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
++ ++ + + SW +IS +A E + M G PD +T S+LSAC
Sbjct: 805 DDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSAC 864
Query: 410 ACLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
+ G +D G + + G+ + I +ID+ + + +A ++P N
Sbjct: 865 SHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFV 924
Query: 468 WTSIILGLRLN 478
W S++ +++
Sbjct: 925 WRSLLAACKVH 935
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 144/303 (47%), Gaps = 6/303 (1%)
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + +G+ +H +K + N L+ MY FG+ + + VF +M ++ SW M
Sbjct: 160 ISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNM 219
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTG 429
IS + KA++ + M G P IAS+++AC G + G + +H ++ G
Sbjct: 220 ISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCG 279
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L+S + + +L+ Y + +A ++F +I + N++SWTS+++ N + E L +R
Sbjct: 280 LMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYR 339
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRC 547
+ N L T+ +++ C G G +I ++ G+ + N+L+ M+
Sbjct: 340 HLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNY 399
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERG--QGALAEEFFRKMIDSKGNWRKLMGLF 604
++ A FN+ ERD +WN ++T A G + +L F+ + K ++ + L
Sbjct: 400 DSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALL 459
Query: 605 RKC 607
C
Sbjct: 460 PAC 462
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 48/333 (14%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
K+PN+ + L Y+ + L C+ D L+ G+ +H+
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLK------------HGMPIHAH 677
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
+ L + ++ ++M+ + GDL + Y+F + +++ +WN + A G +EA
Sbjct: 678 IVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEA 737
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L RM GV D ++F L T G + L G+++H +I+ G+E D V+NA +
Sbjct: 738 LKFIARM-RNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMD 796
Query: 241 MYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCG++ + +PK R + SWN +IS +G + + F M ++ + PD +
Sbjct: 797 MYGKCGEIDDVFRILP-IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHV 855
Query: 300 TLSSVISASELVG--DEKL-----------------------------GR--EVHGYVIK 326
T S++SA G DE L GR E G++ K
Sbjct: 856 TFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDK 915
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
M + V L+ GN E G K R+
Sbjct: 916 MPVPPNEFVWRSLLAACKVHGNLELGRKAADRL 948
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 138/354 (38%), Gaps = 77/354 (21%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ALK++ M+ + +D+ + + DEG LHS + K L +
Sbjct: 732 GPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVL 791
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ K G++ + + R SWN+LI A+ GFF +A + M + G+
Sbjct: 792 NATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDL-GL 850
Query: 194 KPDVYTFPCVLRTC--GGVPDLKRGKEVHVH----VIRFGYEADVDVVNALITMYVKCGD 247
KPD TF +L C GG+ D E V+ FG ++ +I + + G
Sbjct: 851 KPDHVTFVSLLSACSHGGLVD-----EGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGR 905
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
L A D MP V P+ S+++A
Sbjct: 906 LAEAEGFIDKMP----------------------------------VPPNEFVWRSLLAA 931
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-------EEGEKVFSRME 360
++ G+ +LGR+ + ++ SDD + Y+ + N + E V +ME
Sbjct: 932 CKVHGNLELGRKAADRLFELNSSDDSA--------YVLYSNVCASTQRWGDVENVRKQME 983
Query: 361 S-----KDVVSWTTM----ISCYEGSVLPDKAVETY-------QMMEAEGSMPD 398
S K SW + ++ G ++ + Y +M EG MPD
Sbjct: 984 SQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPD 1037
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 242/433 (55%), Gaps = 15/433 (3%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH------LSVRLGNAFLSMFVKFGDLGHAW 150
+ ++ ++ C+ +G + +H+ + KTM +S RL +A + + D +A
Sbjct: 24 SFLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTISTRL-SALCAQSLPI-DPRYAL 78
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
+ ++ +L +N +I G A + E L +Y++M G+ PD YT P VL+ C
Sbjct: 79 SLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQML-SKGIVPDNYTIPFVLKACAE 137
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
++ G+EVH I+ G +DV V N L+ MY C + AR VFD P+RD +SW M
Sbjct: 138 SRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTM 197
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I GY + G +G+ LF M + D MTL V+S+ +GD +LGR++H Y+I+
Sbjct: 198 IQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSN 257
Query: 330 SD-DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ DV V N L+ MYL G+ KVF M K+VVSW +MIS +++ ++
Sbjct: 258 VNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFR 317
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ G PD++T+ +VL++CA LG L+LG +H R + + I N L+DMY+KC
Sbjct: 318 KMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCG 377
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILS 507
ID+A VF + K+V S+T++I+GL ++ + +AL F +M + ++P+ VT V +L+
Sbjct: 378 SIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLT 437
Query: 508 ACARIGALMCGKE 520
AC+ +G + G++
Sbjct: 438 ACSHVGLVEEGRK 450
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 214/409 (52%), Gaps = 21/409 (5%)
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P +F L+TC + LK ++H +I+ D A +T+ + L L
Sbjct: 20 PHKLSFLSTLQTCKSIKGLK---QIHASIIKTMPSPD-----AQLTISTRLSALCAQSLP 71
Query: 255 FDGMPKRDRIS---------WNAMISGY-FENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
D ++ +NA+I G N + ++GL+++ M + PD T+ V
Sbjct: 72 IDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFV 131
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ A + G EVHG IKMG + DV V N L++MY KVF +D+
Sbjct: 132 LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDL 191
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSWTTMI Y + V + M E D +T+ VLS+CA LG+L LG KLH+
Sbjct: 192 VSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRY 251
Query: 425 AMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+R ++ + + N L+DMY KC + A +VF ++P KNV+SW S+I GL + E
Sbjct: 252 IIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKE 311
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+L FRKM L +KP+ VTLV++L++CA +G L GK +HA+ R + DGF+ NAL+D
Sbjct: 312 SLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVD 371
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY +CG + A F + N +DV ++ ++ G A GQG A + F +M
Sbjct: 372 MYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEM 420
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 195/395 (49%), Gaps = 12/395 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N S+E + Y M I D + +++ C R EG +H K V +
Sbjct: 104 NDSIEGLVVY-KQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYV 162
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N + M+ + A VF RDL SW +I GY K GF E + L+ M
Sbjct: 163 SNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCG-EN 221
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
++ D T VL +C + DL+ G+++H ++IR DV V NAL+ MY+KCGD A
Sbjct: 222 LQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFA 281
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VF MP ++ +SWN+MISG + G++ + L +F M+ + V PD +TL +V+++ +
Sbjct: 282 RKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL 341
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +LG+ VH Y+ + D + N L+ MY G+ ++ VF M KDV S+T MI
Sbjct: 342 GVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMI 401
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-----LAM 426
KA++ + M G PDE+T VL+AC+ +G ++ G K + +
Sbjct: 402 VGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNL 461
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
R L Y ++D+ + I++A E +P
Sbjct: 462 RPQLEHY----GCMVDLLGRAGLINEAEEFIRNMP 492
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 184/381 (48%), Gaps = 44/381 (11%)
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGH 148
N+ D LV ++ C G LH ++ + +L V +GNA + M++K GD
Sbjct: 221 NLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANF 280
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF +M +++ SWN +I G A+ G F E+L ++++M +G VKPD T VL +C
Sbjct: 281 ARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG-VKPDDVTLVAVLNSCA 339
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ L+ GK VH ++ R AD + NAL+ MY KCG + +A VF M ++D S+ A
Sbjct: 340 NLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTA 399
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MI G +G+ K L LF M ++ ++PD +T V++A VG + GR+
Sbjct: 400 MIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK--------- 450
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ +D+S L +G M+ + L ++A E +
Sbjct: 451 YFEDMSTIYNLRPQLEHYG---------------------CMVDLLGRAGLINEAEEFIR 489
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLG----IKLHQLAMRTGLISYIIIANTLIDMY 444
M E PD + ++L AC G ++LG K+ ++ R +Y++++N +Y
Sbjct: 490 NMPIE---PDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKD-GAYVLMSN----IY 541
Query: 445 SKCKCIDKALEVFHQIPDKNV 465
S AL++ + ++N+
Sbjct: 542 SSANRWRDALKLRKTMKERNL 562
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 30 FYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQEL 89
Y K +F+ K Q + V N + NS ++ L G +++L MQ L
Sbjct: 271 MYLKCGDANFARKVFQEMPVKNVVSW--------NSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHA 149
+ D+ LV ++ C + G ++H+ + + +GNA + M+ K G + A
Sbjct: 323 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 382
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
+VF M +D++S+ +I G A G +AL L+ M + G++PD TF VL C
Sbjct: 383 CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKM-GIEPDEVTFVGVLTACSH 441
Query: 210 VPDLKRGKE 218
V ++ G++
Sbjct: 442 VGLVEEGRK 450
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 255/491 (51%), Gaps = 26/491 (5%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E +H + KT H + + ++++ K G + A VF + R++ +W L+ GY
Sbjct: 76 EARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYV 135
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ AL L+ +M G P YT VL C + ++ GK+VH ++I++ + D
Sbjct: 136 QNSHPLLALQLFIKMLEAGAY-PSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDT 194
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ N+L + Y K L A F + ++D ISW ++IS +NG+ + L F+ M
Sbjct: 195 SIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSD 254
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P+ TL+SV+SA ++ LG ++H IK+G+ + + N ++ +YL G E
Sbjct: 255 GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEA 314
Query: 353 EKVFSRMESKDVVSWTTMISCY-------EGSVLPDK----AVETYQMMEAEGSMPDEIT 401
+K+F ME+ ++V+W MI+ + E V K A+ +Q + G PD T
Sbjct: 315 QKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFT 374
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+SVLS C+ L L+ G ++H +++G+++ +++ L+ MY+KC IDKA + F ++P
Sbjct: 375 FSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 434
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIG---ALMC 517
+ +ISWTS+I G + S +AL F M ++ +KPN VT V +LSAC+ G +
Sbjct: 435 SRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALY 494
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLT 572
E+ I D F L+DMY+R GR++ A++ F NE + W++L+
Sbjct: 495 YFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFEPNE---TIWSMLIA 549
Query: 573 GYAERGQGALA 583
G G+ L
Sbjct: 550 GCRSHGKSDLG 560
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 222/425 (52%), Gaps = 16/425 (3%)
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
Y FP +L+ C + +H H+++ G+ D+ V+ L+ +Y KCG + A VFD
Sbjct: 60 YYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDN 118
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+P+R+ +W +++GY +N + L LFI M E P TL V++A + + G
Sbjct: 119 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 178
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++VH Y+IK D S+ N L Y F E K F ++ KDV+SWT++IS +
Sbjct: 179 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN 238
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+++ + M ++G P+E T+ SVLSAC + LDLG ++H L+++ G S I+I
Sbjct: 239 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 298
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALI 486
N+++ +Y KC + +A ++F + N+++W ++I G + + AL
Sbjct: 299 NSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 358
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F+K+ + +KP+ T S+LS C+ + AL G++IH ++ GV D + AL+ MY
Sbjct: 359 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 418
Query: 546 RCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMG 602
+CG + A F R + +W ++TG+A G A + F M + K N +G
Sbjct: 419 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 478
Query: 603 LFRKC 607
+ C
Sbjct: 479 VLSAC 483
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 179/361 (49%), Gaps = 28/361 (7%)
Query: 28 TSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQ 87
+SFY K + F+ K + ++ + + +S+ ++ C NG ++L + M
Sbjct: 201 SSFYSKFRRLEFAIKAFKIIKEKDVISWTSV--------ISSCCDNGQAARSLSFFMDML 252
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLG 147
+ +E L +++ C D G +HS+ K S+ + N+ + +++K G L
Sbjct: 253 SDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLI 312
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE-----------ALSLYQRMFWVGGVKPD 196
A +F M +L +WN +I G+AK E AL+++Q+++ G+KPD
Sbjct: 313 EAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY-RSGMKPD 371
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++TF VL C + L++G+++H +I+ G ADV V AL++MY KCG + +A F
Sbjct: 372 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 431
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG--DE 314
MP R ISW +MI+G+ +G + L LF MR V + P+ +T V+SA G DE
Sbjct: 432 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 491
Query: 315 KLGR-EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMI 371
L E+ + D C LI MYL G EE V +M E + + W+ +I
Sbjct: 492 ALYYFELMQKQYNIKPVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETI-WSMLI 548
Query: 372 S 372
+
Sbjct: 549 A 549
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 248/492 (50%), Gaps = 47/492 (9%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + + WN++ G+A + AL LY M +G + P+ +TFP
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLG-LLPNFFTFPF 80
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD------ 256
+L++C K G+++H HV++ G++ D+ V +LI+MY + G L A+ VFD
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 257 -------------------------GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+P +D +SWNAMISGY E G Y K L LF M +
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+++V+SA G +LGR+VH ++ GF ++ + N LI +Y G E
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
++ + +KDV+SW T+I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIAN------TLIDMYSKCKCIDKALEVFHQIP-DKN 464
LG +D+G +H + + +++ N +LIDMY+KC ID A +V +++
Sbjct: 321 LGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRS 378
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
+ +W ++I G ++ R+ A F +M N ++P+ +T V +LSAC+ G L G+ I
Sbjct: 379 LSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIF- 437
Query: 524 HALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQ 579
++R L + ++D+ G K A N+ E D W LL G
Sbjct: 438 RSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 497
Query: 580 GALAEEFFRKMI 591
L E F +K+I
Sbjct: 498 LELGESFAKKLI 509
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 212/452 (46%), Gaps = 45/452 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L++ C + + EG +H V K L + + + +SM+ + G L A VF + RD
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 161 LFSWNVLIGGYAKAGF-------FDE------------------------ALSLYQRMFW 189
+ S+ LI GYA G+ FDE AL L++ M
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
VKPD T V+ C ++ G++VH + G+ +++ +VNALI +Y KCG++
Sbjct: 201 T-NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVE 259
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A + +G+ +D ISWN +I GY Y + L+LF M P+ +T+ S++ A
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319
Query: 310 LVGDEKLGREVHGYVIK----MGFSDDVSVCNPLIKMYLSFGNREEGEKVF-SRMESKDV 364
+G +GR +H Y+ K + ++ S+ LI MY G+ + +V S ++ +
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSL 379
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+W MI + + A + + M G PD+IT +LSAC+ G LDLG + +
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFR- 438
Query: 425 AMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+MR + + +ID+ +A E+ + +P + + + W S++ +++ +
Sbjct: 439 SMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG-N 497
Query: 482 FEALIFFRKMMLNLKPN---SVTLVSILSACA 510
E F K ++ ++P S L+S + A A
Sbjct: 498 LELGESFAKKLIKIEPENPGSYVLLSNIYATA 529
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE + +V C + G +HS ++
Sbjct: 176 NAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWIND 235
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G++ A + + ++D+ SWN LIGGY + EAL L
Sbjct: 236 HGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLL 295
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA------ 237
+Q M G DV T +L C + + G+ +HV++ + V V NA
Sbjct: 296 FQEMLRSGETPNDV-TMLSILPACAHLGAIDIGRWIHVYIDK--KLKGVVVTNASSLRTS 352
Query: 238 LITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI MY KCGD+ A V D R +WNAMI G+ +G +F MR+ ++P
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 412
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +T ++SA G LGR + F + + +
Sbjct: 413 DDITFVGLLSACSHSGMLDLGRNI-------------------------FRSMRQDYNIT 447
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
++E + MI S L +A E M E PD + S+L AC GNL+
Sbjct: 448 PKLE-----HYGCMIDLLGHSGLFKEAEEMINTMPME---PDGVIWCSLLKACKIHGNLE 499
Query: 417 LG 418
LG
Sbjct: 500 LG 501
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 33/272 (12%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF + + + W M + S P A++ Y +M + G +P+ T +L +CA
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK-------------------------- 448
G ++H ++ G + + +LI MY++
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 449 -----CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
I+ A ++F +IP K+V+SW ++I G +AL F++MM N+KP+ T+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
+++SACA+ G++ G+++H+ G + + NAL+D+Y +CG ++ A +
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 302
>gi|226498716|ref|NP_001141997.1| uncharacterized protein LOC100274147 [Zea mays]
gi|194706740|gb|ACF87454.1| unknown [Zea mays]
gi|413916679|gb|AFW56611.1| hypothetical protein ZEAMMB73_013723 [Zea mays]
Length = 688
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 268/569 (47%), Gaps = 25/569 (4%)
Query: 40 SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALV 99
+ + +Q+ +++N S+++ + L L G L AL LD + + A
Sbjct: 48 TPRTSQAELRPDSKNASALSAE-----LRRLARAGRLPSALSLLDHLSHRGVPATASAFA 102
Query: 100 NLVRLCE---WKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
L+ C R L +H + T L RL + +++ G A V M
Sbjct: 103 TLLSACRSLLHARQIHAHLRIHGL--DTNEFLLARL----VELYITLGATDDARGVLDGM 156
Query: 157 CDR--DLFSWNVLIGGYAKAGFFDEALSLYQRM--FWVGGVKPDVYTFPCVLRTCGGV-- 210
+SWN L+ G+ + G + A + G + YT+ CVL++ G
Sbjct: 157 QQHGATAYSWNALLHGHVRWGRGEAAGPVADAFAEMRAAGANANEYTYGCVLKSISGSVR 216
Query: 211 PDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
P + H +++ + A ++ L+ +Y KCG + A VF+ MP+RD ++W A
Sbjct: 217 PSMTMATATHATLVKNAFAGAPGMLMTGLMDVYFKCGKVKLAVRVFEEMPERDVVAWGAA 276
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK-MG 328
I+G+ G + L F M E V + + LSS++ + LGREVHG+V+K G
Sbjct: 277 IAGFAHKGMKREALEHFRWMVEDGVKVNCVVLSSIVPVIGELRARNLGREVHGFVLKKFG 336
Query: 329 FSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
DV+ V L+ MY G+ G +VF + ++ VSWT ++S Y + PD+A+
Sbjct: 337 NRKDVAKVQAGLVDMYCKCGDMISGRRVFYNSKKRNAVSWTALMSGYASNSRPDQALRCI 396
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M+ EG PD I + +VL C L L G +LH A+R + + + +LI MY C
Sbjct: 397 AWMQQEGIRPDLIAVGTVLPVCTKLKALREGKQLHAYALRRWFLPNVSLCTSLITMYGTC 456
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSIL 506
++ + VFH + K V +WT+++ N F A+ FR M+L N +P++V + +L
Sbjct: 457 DHLEYSHRVFHDMDKKTVQAWTALVDANLKNGDPFTAMDLFRSMLLTNRRPDAVAITRML 516
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS- 565
SAC IGAL GKE+H L++ + + +++MY RCG +K A FN E S
Sbjct: 517 SACTDIGALRVGKEVHRQVLQLRMEQLPLVAAEVVNMYGRCGDLKAAQRVFNRTESKGSM 576
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDSK 594
++ YA + A F M+ +K
Sbjct: 577 TCTAIIEAYAVNQRHKDALHLFTWMLSNK 605
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 193/385 (50%), Gaps = 4/385 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + ++ K G + A VF +M +RD+ +W I G+A G EAL ++ M
Sbjct: 241 LMTGLMDVYFKCGKVKLAVRVFEEMPERDVVAWGAAIAGFAHKGMKREALEHFRWMV-ED 299
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNA-LITMYVKCGDLV 249
GVK + ++ G + G+EVH V++ FG DV V A L+ MY KCGD++
Sbjct: 300 GVKVNCVVLSSIVPVIGELRARNLGREVHGFVLKKFGNRKDVAKVQAGLVDMYCKCGDMI 359
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
R VF KR+ +SW A++SGY N + L M++ + PD + + +V+
Sbjct: 360 SGRRVFYNSKKRNAVSWTALMSGYASNSRPDQALRCIAWMQQEGIRPDLIAVGTVLPVCT 419
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G+++H Y ++ F +VS+C LI MY + + E +VF M+ K V +WT
Sbjct: 420 KLKALREGKQLHAYALRRWFLPNVSLCTSLITMYGTCDHLEYSHRVFHDMDKKTVQAWTA 479
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++ + P A++ ++ M PD + I +LSAC +G L +G ++H+ ++
Sbjct: 480 LVDANLKNGDPFTAMDLFRSMLLTNRRPDAVAITRMLSACTDIGALRVGKEVHRQVLQLR 539
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ ++A +++MY +C + A VF++ K ++ T+II +N R +AL F
Sbjct: 540 MEQLPLVAAEVVNMYGRCGDLKAAQRVFNRTESKGSMTCTAIIEAYAVNQRHKDALHLFT 599
Query: 490 KMMLN-LKPNSVTLVSILSACARIG 513
M+ N P T +L C G
Sbjct: 600 WMLSNKFVPTKATFDVVLKICEAAG 624
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 256/513 (49%), Gaps = 42/513 (8%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+ LH + ++ ++ LG +S V+ DL +A +F ++ + F +N LI GY+ +
Sbjct: 59 IILHGLATQVLT-----LGK-LVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNS 112
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
++L LY+RM G+ P+ +T P VL+ C G VH + G + V
Sbjct: 113 SDPIKSLLLYRRMV-CDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACV 171
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NA++ +YV CG + AR VFD + +R +SWN+MI+GY + G + +++F M+EV +
Sbjct: 172 QNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGL 231
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+PD TL ++S S G+ LGR VH +++ G D V N L+ MY GN + +
Sbjct: 232 EPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKS 291
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE--------------------- 393
VF +M KDVVSWT MI+ Y L D A+E + M +
Sbjct: 292 VFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEA 351
Query: 394 ----------GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
G M ++ T+ ++LS+C+ +G+L LG + H + + N +IDM
Sbjct: 352 VDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDM 411
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
Y+KC + A++VF +P+KN +SW II L L+ EA+ F KM + + P+ +T
Sbjct: 412 YAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITF 471
Query: 503 VSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN- 560
+LSAC+ G + G+ L G++ D ++D+ R G + A +
Sbjct: 472 TGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMP 531
Query: 561 -ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ DV W+ LL G A+ ++ +++++
Sbjct: 532 VKPDVVVWSALLGACRTYGNLAIGKQIMKQLLE 564
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 201/411 (48%), Gaps = 33/411 (8%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
LK+ K VH +I G V + L++ V+ DL A +FD +P+ ++ +N +I G
Sbjct: 49 LKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKG 108
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + + +K L+L+ M + P+ T+ V+ A LG VH K+G
Sbjct: 109 YSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSH 168
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N ++ +Y++ G +VF + + +VSW +MI+ Y ++AV ++ M+
Sbjct: 169 ACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQE 228
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC---KC 449
G PD T+ +LS GN DLG +H + TG+ I+ N L+DMY+KC KC
Sbjct: 229 VGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKC 288
Query: 450 ----------------------------IDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
ID ALE F+Q+P KNV+SW SII
Sbjct: 289 AKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLY 348
Query: 482 FEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA+ +F+R + N TLV+ILS+C+ +G L GK+ H++ + L NA+
Sbjct: 349 AEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAI 408
Query: 541 LDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY +CG ++ A + F E++ +WN+++ A G G A E F KM
Sbjct: 409 IDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKM 459
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 224/496 (45%), Gaps = 72/496 (14%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSK--TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+++ C K Y G+ +H+ K SH V+ NA L+++V G + A VF + +
Sbjct: 140 VLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQ--NAILNIYVACGLITSARRVFDDISE 197
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R L SWN +I GY+K G +EA+ +++ M VG ++PDV+T +L + G+
Sbjct: 198 RTLVSWNSMINGYSKMGRSEEAVLMFREMQEVG-LEPDVFTLVGLLSVSTKHGNFDLGRF 256
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY----- 273
VH+H++ G E D V NAL+ MY KCG+L A+ VFD M +D +SW MI+ Y
Sbjct: 257 VHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGL 316
Query: 274 --------------------------FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ G Y + + LF M + V + TL +++S+
Sbjct: 317 IDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSS 376
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+GD LG++ H Y+ + ++CN +I MY G + VF M K+ VSW
Sbjct: 377 CSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSW 436
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+I +A+E ++ M+A G PDEIT +LSAC+ G +D G ++
Sbjct: 437 NVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNL 496
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
T IS PD + +LG R EA+
Sbjct: 497 TFGIS----------------------------PDVEHYACMVDLLGRR--GLLGEAISL 526
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+KM +KP+ V ++L AC G L GK+I L +G ++ L L +MY
Sbjct: 527 IKKM--PVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELG-RYNSGLYVLLSNMYSES 583
Query: 548 GR---MKPAWNQFNSN 560
R MK W + N
Sbjct: 584 QRWDDMKNIWKILDQN 599
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +A+ M + + ++ LV ++ C G HS + LS L
Sbjct: 346 GLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLC 405
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ K G L A VF M +++ SWNV+IG A G+ EA+ ++++M GV
Sbjct: 406 NAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKM-QASGV 464
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD TF +L C + G+ + + FG DV+ ++ + + G L A
Sbjct: 465 CPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAI 524
Query: 253 LVFDGMP-KRDRISWNAMISG 272
+ MP K D + W+A++
Sbjct: 525 SLIKKMPVKPDVVVWSALLGA 545
>gi|15227389|ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|4584344|gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330251504|gb|AEC06598.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 256/480 (53%), Gaps = 11/480 (2%)
Query: 116 YLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
++ +V K + LS + GN+ ++K GDL F M RD SWNV++ G
Sbjct: 46 FVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDY 105
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
GF +E L + ++ V G +P+ T V+ C + G+++H +VIR G+ V
Sbjct: 106 GFEEEGLWWFSKLR-VWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSV 162
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVL 293
N+++ MY D + AR +FD M +RD ISW+ +I Y ++ E + GL LF M+ E
Sbjct: 163 QNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK 221
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEG 352
+PD +T++SV+ A ++ D +GR VHG+ I+ GF DV VCN LI MY + +
Sbjct: 222 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSA 281
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF +++VSW ++++ + + D+A+E + +M E DE+T+ S+L C
Sbjct: 282 FRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+H + +R G S + ++LID Y+ C +D A V + K+V+S +++I
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
GL RS EA+ F M PN++T++S+L+AC+ L K H A+R +A
Sbjct: 402 SGLAHAGRSDEAISIFCHM--RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 533 -DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + +++D Y +CG ++ A F+ E+++ +W ++++ YA G A F +M
Sbjct: 460 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 229/459 (49%), Gaps = 27/459 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L M+ L A +F +M +RD+ SW+V+I Y ++ L L++ M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRAR 252
+PD T VL+ C + D+ G+ VH IR G++ ADV V N+LI MY K D+ A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD R+ +SWN++++G+ N Y + L +F +M + V+ D +T+ S++ +
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG +I+ G+ + + LI Y S ++ V M KDVVS +TMIS
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-I 431
+ D+A+ + M P+ IT+ S+L+AC+ +L H +A+R L I
Sbjct: 403 GLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I + +++D Y+KC I+ A F QI +KN+ISWT II +N +AL F +M
Sbjct: 460 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCG--------KEIHAHALRIGVAFDGFLPNALLD 542
PN+VT ++ LSAC G + G +E H +L+ + ++D
Sbjct: 520 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ--------HYSCIVD 571
Query: 543 MYVRCGRMKPAWNQFNSNERDV----SAWNILLTGYAER 577
M R G + A + DV SAW +L+G R
Sbjct: 572 MLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR 610
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 213/439 (48%), Gaps = 27/439 (6%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G + E +S Y + G D + FP V + C + L +G
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG----------------- 64
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
N++ Y+KCGDL FD M RD +SWN ++ G + G +GL F +R
Sbjct: 65 --NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+P+ TL VI A + + G ++HGYVI+ GF SV N ++ MY +
Sbjct: 123 FEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSAR 179
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACL 412
K+F M +DV+SW+ +I Y S P ++ ++ M E + PD +T+ SVL AC +
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 413 GNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
++D+G +H ++R G ++ + + N+LIDMYSK +D A VF + +N++SW SI
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G N R EAL F M+ ++ + VT+VS+L C + K IH +R G
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 359
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ ++L+D Y C + A +S +DV + + +++G A G+ A F
Sbjct: 360 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 419
Query: 590 MIDSKGNWRKLMGLFRKCQ 608
M D+ N ++ L C
Sbjct: 420 MRDTP-NAITVISLLNACS 437
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L N ++AL+ M + + VDE +V+L+R+C++ +H V+ +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ + + + A V M +D+ S + +I G A AG DEA+S+
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMY 242
+ M P+ T +L C DL+ K H IR D+ V +++ Y
Sbjct: 417 FCHM----RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + AR FD + +++ ISW +IS Y NG K L LF M++ P+ +T
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 303 SVISASELVGDEKLGREVHGYVIKMGF 329
+ +SA HG ++K G
Sbjct: 533 AALSACN-----------HGGLVKKGL 548
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 227/441 (51%), Gaps = 23/441 (5%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
+N L+ GYA A +Y+R+ G PD++TFP VL++C + G++VH +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIV-KDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
I+ G+ ++ V N+L+ Y C A VFD M RD +SW +ISGY G + + +
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAV 120
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF+ M V+P+ T SV+ A G +G+ +HG K F + V N L+ MY
Sbjct: 121 GLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMY 177
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
+ G ++VF + KD+VSWT++IS P +A+E +Q M++ G PD I +
Sbjct: 178 VKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILT 237
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVLSACA LG LD G +H+ R + I I ++DMY+KC CI+ ++++F+ +P K
Sbjct: 238 SVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-- 520
NV++W +++ GL ++ +++ L F +M+ + ++PN VT ++IL+AC G + G++
Sbjct: 298 NVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYF 357
Query: 521 ---------IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILL 571
+ G D LLD + + P DV LL
Sbjct: 358 NWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPM-------SPDVRIMGALL 410
Query: 572 TGYAERGQGALAEEFFRKMID 592
+ E G L +E + ++
Sbjct: 411 SACKENGNTELPQEILDRFVE 431
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 188/367 (51%), Gaps = 14/367 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G EG +H V+ K ++ + N+ + + G A VF +M RD
Sbjct: 40 VLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRD 99
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW +I GY +AG FDEA+ L+ RM V+P+ TF VL CG L GK +H
Sbjct: 100 VVSWTGVISGYVRAGLFDEAVGLFLRM----DVEPNAATFVSVLVACGRKGYLSVGKGIH 155
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ + ++V NAL+ MYVKCG L A+ VFD + ++D +SW ++ISG +
Sbjct: 156 GLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPK 215
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF M+ ++PD + L+SV+SA +G GR VH ++ + D+ + ++
Sbjct: 216 EALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMV 275
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E ++F+ M K+V++W +++ K +E ++ M G P+E+
Sbjct: 276 DMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEV 335
Query: 401 TIASVLSACACLGNLDLG------IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
T ++L+AC G ++ G +K Q + L Y ++D+ + + +D+AL
Sbjct: 336 TFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHY----GCMVDLLCRARLLDEAL 391
Query: 455 EVFHQIP 461
E+ +P
Sbjct: 392 ELTKAMP 398
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ ++S Y P A Y+ + +G +PD T +VL +CA + G ++H + +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ G + I + N+L+ YS CK A VF ++ ++V+SWT +I G EA+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 487 FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F +M +++PN+ T VS+L AC R G L GK IH + + + NAL+DMYV+
Sbjct: 122 LFLRM--DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVK 179
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG + A F+ E+D+ +W +++G + A E F+ M S
Sbjct: 180 CGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSS 227
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 250/502 (49%), Gaps = 9/502 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D V L++ C + D G +H V + + + M+ + G + A VF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ +D+F+W +IG Y + G +D AL ++ +M V P T+ +L C L
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTESL 121
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
K G E+H +++ G+E DV V ALI MY KCG + A F + RD +SW AMI+
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL---GREVHGYVIKMGFS 330
++ ++ L+ M+ V P+ +TL +V +A GD G+ V+G V
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA---YGDPNYLSEGKFVYGLVSSGVME 238
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
DV V N + M+ + G + ++F M +DVV+W +I+ Y + +AV + +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ +G ++IT +L+ L +L G +H+L G ++A L+ +Y +C+
Sbjct: 299 QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
+A ++F + K+VI+WT + + N EAL F++M L +P S TLV++L C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
A + AL G++IH+H + + + AL++MY +CG+M A + F +RD+ WN
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWN 478
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
+L YA+ G + F +M
Sbjct: 479 SMLGAYAQHGYYDETLQLFNQM 500
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 236/485 (48%), Gaps = 3/485 (0%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C G ++AL MQE ++ + V ++ C +G+ +H + + V
Sbjct: 81 CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+G A ++M+ K G + AW F ++ RD+ SW +I + F A LY+RM +
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRM-QL 199
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV P+ T V G L GK V+ V E+DV V+N+ + M+ G L
Sbjct: 200 DGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGD 259
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +F+ M RD ++WN +I+ Y +N + + + LF +++ V + +T +++
Sbjct: 260 ARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTS 319
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +H V + G+ D V L+ +Y + K+F M SKDV++WT M
Sbjct: 320 LTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVM 379
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
Y + +A++ +Q M+ EG P T+ +VL CA L L G ++H +
Sbjct: 380 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRF 439
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+++ LI+MY KC + +A+ VF ++ ++++ W S++ + E L F +
Sbjct: 440 RMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 499
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCG 548
M L+ +K ++V+ VS+LSA + G++ G + L+ + L ++D+ R G
Sbjct: 500 MQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAG 559
Query: 549 RMKPA 553
R++ A
Sbjct: 560 RIQEA 564
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 10/403 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD F +L+ C ++ G+ VH HV G+E + V LI MY +CG + A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + ++D +W MI Y + G+Y + L +F M+E V P +T ++++A
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G E+HG +++ GF DV V LI MY G+ F R+E +DVVSWT MI+
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA- 179
Query: 374 YEGSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
V D+ A Y+ M+ +G +P++IT+ +V +A L G ++ L +
Sbjct: 180 --ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF-EALIFFR 489
S + + N+ ++M+ + A +F + D++V++W +I++ L + N +F EA+ F
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW-NIVITLYVQNENFGEAVRLFG 296
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
++ + +K N +T V +L+ + +L GK IH G D + AL+ +Y RC
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCE 356
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AW F + +DV W ++ YA+ G A + F++M
Sbjct: 357 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 399
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 190/377 (50%), Gaps = 8/377 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG +++ +VS + VR+ N+ ++MF G LG A +F M DRD+ +WN++I Y
Sbjct: 224 EGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYV 283
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F EA+ L+ R+ GVK + TF +L + L +GK +H V GY+ D
Sbjct: 284 QNENFGEAVRLFGRL-QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDA 342
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V AL+++Y +C +A +F M +D I+W M Y +NG + L LF M+
Sbjct: 343 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 402
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P TL +V+ + + GR++H ++I+ F ++ V LI MY G E
Sbjct: 403 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEA 462
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF +M +D++ W +M+ Y D+ ++ + M+ +G D ++ SVLSA +
Sbjct: 463 MSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHS 522
Query: 413 GNLDLGIKLHQLAMRTGLISYII-IANTLIDMYSKCKCIDKALEVFHQ----IPDKNVIS 467
G++ G + ++ I+ + ++D+ + I +A+++ + +PD I
Sbjct: 523 GSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDG--IL 580
Query: 468 WTSIILGLRLNNRSFEA 484
W +++ R +N++ +A
Sbjct: 581 WMTLLGACRTHNKTDQA 597
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 237/463 (51%), Gaps = 34/463 (7%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+ ++ LI G++ G +A+ +++++ +G V PD +TFP VL C L G +VH
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAV-PDNFTFPFVLSACTKSAALTEGFQVHG 163
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+++ G+E D+ V N+LI Y +CG++ R VFD M +R+ +SW ++I GY + G Y +
Sbjct: 164 AIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKE 223
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M EV + P+ +T+ VISA + D +LG +V + ++ + + N L+
Sbjct: 224 AVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVD 283
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G ++ K+F K++V + T++S Y L + + M G PD IT
Sbjct: 284 MYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT 343
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC-----KC------- 449
+ S +SAC+ L ++ G H +R GL + + N +I+MY KC C
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403
Query: 450 -------------------IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
++ A ++F +PD +++SW ++I L + EA+ FR
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + VT+V + SAC +GAL K IH + + + FD L AL+DM+ RCG
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ A FN +RDVSAW + A G G A E F +M+
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEML 566
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 247/504 (49%), Gaps = 36/504 (7%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C EG +H + K + + N+ + + + G++ VF KM +R++ SW
Sbjct: 149 CTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSW 208
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
LIGGYAK G + EA+SL+ M V G++P+ T V+ C + DL+ G++V +
Sbjct: 209 TSLIGGYAKRGCYKEAVSLFFEMVEV-GIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
E + +VNAL+ MY+KCG + +AR +FD ++ + +N ++S Y G + L
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M + PD +T+ S +SA + D G+ HGYV++ G +VCN +I MY+
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYM 387
Query: 345 SFGNREEGEKVFSRMESK-------------------------------DVVSWTTMISC 373
G +E +VF RM +K D+VSW TMI
Sbjct: 388 KCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGA 447
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ +A+E +++M++EG D++T+ V SAC LG LDL +H + +
Sbjct: 448 LVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFD 507
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+ + L+DM+++C A++VF+++ ++V +WT+ I + + A+ F +M+
Sbjct: 508 MHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQ 567
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMK 551
+KP+ V V++L+A + G + G I I G+A ++D+ R G +
Sbjct: 568 QGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLS 627
Query: 552 PAWNQFNSNERDVS--AWNILLTG 573
A + NS + + + W LL
Sbjct: 628 EALSLINSMQMEPNDVIWGSLLAA 651
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 210/468 (44%), Gaps = 37/468 (7%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++A+ M E+ I + +V ++ C + G + + + + ++ +
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV 278
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M++K G + A +F + D++L +N ++ Y + G E L++ M G
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEML-KHGP 337
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG------- 246
+PD T + C + D+ GK H +V+R G E +V NA+I MY+KCG
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACR 397
Query: 247 ------------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
D+ A +F MP D +SWN MI + + +
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ LF +M+ + D +T+ V SA +G L + +HGY+ K D+ + L+ M
Sbjct: 458 IELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDM 517
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
+ G+ + +VF++M +DV +WT I A+E + M +G PD +
Sbjct: 518 FARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVF 577
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++L+A + G ++ G + + +M+ G+ + ++D+ + + +AL + + +
Sbjct: 578 VALLTALSHGGLVEQGWHIFR-SMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSM 636
Query: 461 P-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ N + W S++ R+ +++ + + + + L P + +LS
Sbjct: 637 QMEPNDVIWGSLLAACRV-HKNVDIAAYAAERISELDPERTGIHVLLS 683
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 420 KLHQLAMRTGL------ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS----WT 469
+LH + GL ++ +I + T + + + KALE+F I D ++ ++
Sbjct: 51 QLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELF--IEDNGIMGTHYMFS 108
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I G ++A++ FR++M + P++ T +LSAC + AL G ++H +++
Sbjct: 109 SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G D F+ N+L+ Y CG + F+ +ER+V +W L+ GYA+RG A F
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 588 RKMIDS--KGNWRKLMGLFRKC 607
+M++ + N ++G+ C
Sbjct: 229 FEMVEVGIRPNSVTMVGVISAC 250
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L ++A++ MQ I D+ +V + C + D ++H + K
Sbjct: 442 NTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKK 501
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
H + LG A + MF + GD A VF KM RD+ +W IG A G A+ L
Sbjct: 502 KDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIEL 561
Query: 184 YQRMFWVGGVKPDVYTFPCVL 204
+ M G+KPD F +L
Sbjct: 562 FDEMLQ-QGIKPDGVVFVALL 581
>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
Length = 906
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 246/490 (50%), Gaps = 13/490 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S + A + + +FG L A +F +M D WN+LI ++ G F++A L++ M
Sbjct: 105 SATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSML 164
Query: 189 --WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
VG P T ++ C L+ G+ VH +V++ G E+D NAL++MY KCG
Sbjct: 165 SCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCG 224
Query: 247 D---LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+V A F + +D +SWN++I+GY EN + + L LF M P++ T++S
Sbjct: 225 GSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVAS 284
Query: 304 VISASELVG-DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
++ G+EVH +V++ G DVSV N L+ Y ++ E +F+ M+ +
Sbjct: 285 ILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVR 344
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D+VSW T+I+ Y + +A+ +Q + + G PD ++ S+L+ACA +G++ G+++H
Sbjct: 345 DIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVH 404
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ ++ + N L+ YS C D A F I +K+ ISW +I+ + +
Sbjct: 405 GYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHI 464
Query: 483 EALIFFRKMML----NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
E M + +SVT+++++ G M +E H +LR+G + + N
Sbjct: 465 EKFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGIKMV-REAHGWSLRVGYTGETSVAN 523
Query: 539 ALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-GN 596
A+LD YV+CG A F N R++ NI+++ Y + AE F M + +
Sbjct: 524 AILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTS 583
Query: 597 WRKLMGLFRK 606
W ++ L+ +
Sbjct: 584 WNLMIQLYAQ 593
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 257/552 (46%), Gaps = 51/552 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD---LGHAWYVFGKMC 157
+V C R G +H V KT GNA +SM+ K G + A F +
Sbjct: 181 IVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIR 240
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRG 216
+D+ SWN +I GY + F EAL+L+ +M G + P+ T +L C G
Sbjct: 241 CKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYL-PNYSTVASILPVCSFTEFGRHHG 299
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
KEVH V+R G E DV V NAL+T Y K ++ +F M RD +SWN +I+GY N
Sbjct: 300 KEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMN 359
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G + + L LF + + PD ++ S+++A VGD K G EVHGY+ + + S+
Sbjct: 360 GYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLM 419
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE--- 393
N L+ Y ++ + F+ + +KD +SW ++S S ++ +E + ++ +E
Sbjct: 420 NALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATS---EQHIEKFFVLMSEMCR 476
Query: 394 ---GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC--- 447
D +T+ +V+ G + + + H ++R G +AN ++D Y KC
Sbjct: 477 GVNQCQWDSVTVLNVIHMSTFCG-IKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYS 535
Query: 448 ----------------------------KCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
CI+ A +F+ + +K++ SW +I N+
Sbjct: 536 HDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQND 595
Query: 480 RSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+A F + LKP+ V++ +IL AC + ++ ++ HA+ LR + D L
Sbjct: 596 MDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEG 654
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKG 595
AL+D Y +CG + A+N F S ++D+ + ++ YA G A E F KM +D +
Sbjct: 655 ALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRP 714
Query: 596 NWRKLMGLFRKC 607
+ L L C
Sbjct: 715 DHVVLTTLLSAC 726
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 263/560 (46%), Gaps = 60/560 (10%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKR-GYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+AL M + + +++ +C + G G +HS V + + V + NA
Sbjct: 262 EALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNAL 321
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ + K ++ +F M RD+ SWN +I GY G+ AL L+Q + G + PD
Sbjct: 322 MTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTG-IAPD 380
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+F +L C V D+K G EVH ++ + + ++NAL+T Y C A F
Sbjct: 381 SVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFT 440
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-----VDPDFMTLSSVISASELV 311
+ +D ISWNA++S + ++++ F++M E+ D +T+ +VI S
Sbjct: 441 DILNKDSISWNAILSACATSEQHIE--KFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFC 498
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR---------------------- 349
G K+ RE HG+ +++G++ + SV N ++ Y+ G
Sbjct: 499 GI-KMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMI 557
Query: 350 ---------EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
E+ E +F+ M KD+ SW MI Y + + +A + +++EG PD +
Sbjct: 558 SCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIV 617
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+IA++L AC L ++ L + H +R L I + L+D YSKC I A +F
Sbjct: 618 SIANILEACIHLCSVQLVRQCHAYMLRASL-EDIHLEGALVDAYSKCGNITNAYNIFQIS 676
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P K+++++T++I ++ + EA+ F KM+ L+++P+ V L ++LSAC+ G + G
Sbjct: 677 PKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGI 736
Query: 520 EIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWN---QFNSNERDVSAWNILL 571
+I I +P A ++D+ R G ++ A+ + + +AW+ LL
Sbjct: 737 KIFKSIREI----HRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANAWSSLL 792
Query: 572 -----TGYAERGQGALAEEF 586
G E GQ A F
Sbjct: 793 GACKVHGKVEIGQLAAGRLF 812
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 12/310 (3%)
Query: 296 PDFMTLSSVI-SASELVGD-EKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEG 352
P + L++ I S+S L G L R +HG +K G + +V ++ Y FG+ +
Sbjct: 66 PGALELAAAIRSSSALPGSGSALARCLHGLAVKAGRVASSATVAKAVMDAYGRFGSLADA 125
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG---SMPDEITIASVLSAC 409
+F M D V W +I+ L + A ++ M + G MP +T+A ++ AC
Sbjct: 126 LLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPAC 185
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC---KCIDKALEVFHQIPDKNVI 466
A +L G +H ++TGL S + N L+ MY+KC + + A F I K+V+
Sbjct: 186 AKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVV 245
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG-ALMCGKEIHAH 524
SW S+I G N EAL F +M+ PN T+ SIL C+ GKE+H+
Sbjct: 246 SWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSF 305
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALA 583
+R G+ D + NAL+ Y + MK + F S + RD+ +WN ++ GY G A
Sbjct: 306 VVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRA 365
Query: 584 EEFFRKMIDS 593
F+ ++ +
Sbjct: 366 LGLFQGLLST 375
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 390 MEAEGSMPDEITIASVLSACACL--GNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSK 446
M EG P + +A+ + + + L L LH LA++ G + S +A ++D Y +
Sbjct: 59 MLGEGHRPGALELAAAIRSSSALPGSGSALARCLHGLAVKAGRVASSATVAKAVMDAYGR 118
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML----NLKPNSVTL 502
+ AL +F ++ + + W +I +A I FR M+ P +VT+
Sbjct: 119 FGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTV 178
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR---MKPAWNQFNS 559
I+ ACA+ L G+ +H + ++ G+ D NAL+ MY +CG M A F+S
Sbjct: 179 AVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSS 238
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
+DV +WN ++ GY E A F +MI S+G N+ + + C
Sbjct: 239 IRCKDVVSWNSVIAGYIENQLFGEALALFSQMI-SQGYLPNYSTVASILPVC 289
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 251/477 (52%), Gaps = 19/477 (3%)
Query: 145 DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVL 204
DLG+ +F ++ +F WN ++ ++ + L Y R+ GV PD +TFP +L
Sbjct: 53 DLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLR-NHGVIPDRHTFPLLL 111
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
+ + + + + + H+++FG + D V N+L++ + CG + +R +F K+D +
Sbjct: 112 KAFSKLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVV 170
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
SW A+I+G NG ++ L F+ MR V+ D +T+ SV+ A+ ++ D GR VHG+
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 325 IKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
++ G DV V + L+ MY G ++ KVF+ M ++++VSW +I+ Y +A
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ +Q M EG P++ T+ S L+ACA LG+LD G LH+ R+ L + L+DM
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDM 350
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC C+D+AL VF ++P K+V WT++I GL + + +L F +M+ + ++PN VT
Sbjct: 351 YSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTF 410
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQF 557
+ +LSACA G + G E+ R+ + PN ++D+ R GR++ A
Sbjct: 411 LGVLSACAHGGLVDEGLEL----FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFI 466
Query: 558 NS--NERDVSAWNILLTGYAERGQGALAEEFFRKMI----DSKGNWRKLMGLFRKCQ 608
S E W L +G L E +I G + L L+ +CQ
Sbjct: 467 ESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQ 523
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 27/407 (6%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ +S F G + + +F + +D+ SW LI G + G EAL + M GV
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR-SSGV 200
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRAR 252
+ D T VL + D+ G+ VH + G DV V +AL+ MY KCG A
Sbjct: 201 EVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF+ MP R+ +SW A+I+GY + Y + L +F M ++P+ T++S ++A +G
Sbjct: 261 KVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLG 320
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
GR +H YV + + + L+ MY G +E VF ++ +KDV WT MI+
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 373 --CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
G L ++ + M P+ +T VLSACA G +D G++L +L +
Sbjct: 381 GLAMRGDAL--SSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM----I 434
Query: 431 ISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
Y + N ++D+ + +++A++ +P + W ++ G + +++FE
Sbjct: 435 CDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMI-HKAFEL 493
Query: 485 LIFFRKMMLNLKPNS----VTLVSILSAC------ARIGALMCGKEI 521
++ L+P+ + L ++ S C A + LM GK +
Sbjct: 494 GEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGV 540
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL- 128
CL NG +AL+ M+ + VDE +V+++ R G ++H ++ +
Sbjct: 179 CLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW 238
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V +G+A + M+ K G A VF +M R+L SW LI GY + + EAL ++Q M
Sbjct: 239 DVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ G++P+ T L C + L +G+ +H +V R + + AL+ MY KCG +
Sbjct: 299 -IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCV 357
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
A LVF+ +P +D W AMI+G G+ + L LF M V P+ +T V+SA
Sbjct: 358 DEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSA 416
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++ALK M I ++ + + + C D+G +LH V ++ L+ +LG A
Sbjct: 288 KEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTAL 347
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G + A VF K+ +D++ W +I G A G +L+L+ +M V+P+
Sbjct: 348 VDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMI-RSRVQPN 406
Query: 197 VYTFPCVLRTC--GGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
TF VL C GG+ D G E+ + + + E +VD ++ + + G L A
Sbjct: 407 GVTFLGVLSACAHGGLVD--EGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIK 464
Query: 254 VFDGMPKRDRIS-WNAMISG-----YFENGEYM 280
+ MP W A+ SG FE GE++
Sbjct: 465 FIESMPMEPTPGVWGALFSGCMIHKAFELGEHI 497
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 253/508 (49%), Gaps = 70/508 (13%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
Y+H+ V K+ + + N + + K G L VF KM R++++WN ++ G K G
Sbjct: 41 YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 176 FFDEALSLYQRM------FWVG------------------------GVKPDVYTFPCVLR 205
F DEA SL++ M W G + Y+F VL
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C G+ D+ +G +VH + + + +DV + +AL+ MY KCG++ A+ VFD M R+ +S
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN++I+ + +NG ++ L +F MM E V+PD +TL+SVISA + K+G+EVHG V+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 326 KMG-FSDDVSVCNPLIKMYLSFGNREEGEKVF---------------------------- 356
K +D+ + N + MY +E +F
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 357 ---SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++M ++VVSW +I+ Y + ++A+ + +++ E P + A++L ACA L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 414 NLDLGIKLHQLAMRTGLI------SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
L LG++ H ++ G I + N+LIDMY KC C+++ VF ++ +++ +S
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I+G N EAL FR+M+ + KP+ +T++ +LSAC G + G+ +
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 527 R-IGVAFDGFLPNALLDMYVRCGRMKPA 553
R GVA ++D+ R G ++ A
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 238/484 (49%), Gaps = 42/484 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ + E+AL Y M + ++E + +++ C ++G+ +HS+++K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V +G+A + M+ K G++ A VF +M DR++ SWN LI + + G EAL +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M V+PD T V+ C + +K G+EVH V++ D+ + NA + MY
Sbjct: 241 FQMML-ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 243 VKCGDLVRARLVFDGMP-------------------------------KRDRISWNAMIS 271
KC + AR +FD MP +R+ +SWNA+I+
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-- 329
GY +NGE + L LF +++ V P + ++++ A + + LG + H +V+K GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 330 ----SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
DD+ V N LI MY+ G EEG VF +M +D VSW MI + + ++A+E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMY 444
++ M G PD IT+ VLSAC G ++ G R G+ ++D+
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 445 SKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLV 503
+ +++A + ++P + + W S++ ++ +R+ + + +L ++P++
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV-HRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 504 SILS 507
+LS
Sbjct: 599 VLLS 602
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 170/309 (55%), Gaps = 34/309 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS----- 372
R VH VIK GFS+++ + N LI Y G+ E+G +VF +M +++ +W ++++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 373 ------------------CYEGSVLP--------DKAVETYQMMEAEGSMPDEITIASVL 406
C S++ ++A+ + MM EG + +E + ASVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
SAC+ L +++ G+++H L ++ +S + I + L+DMYSKC ++ A VF ++ D+NV+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW S+I N + EAL F+ M+ + ++P+ VTL S++SACA + A+ G+E+H
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 526 LRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALA 583
++ + D L NA +DMY +C R+K A F+S R+V A +++GYA A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 584 EEFFRKMID 592
F KM +
Sbjct: 340 RLMFTKMAE 348
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 33/207 (15%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---- 476
+H +++G + I I N LID YSKC ++ +VF ++P +N+ +W S++ GL
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 477 ---------------------------LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
++R EAL +F M N + S+LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C+ + + G ++H+ + D ++ +AL+DMY +CG + A F+ +R+V +W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSK 594
N L+T + + G A + F+ M++S+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESR 248
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 488 FRKMMLNLKP--NSVTLVSILSAC--ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
F K+ +L +S +L +C +++ A+ + +HA ++ G + + F+ N L+D
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID-SKGNWRKLM 601
Y +CG ++ F+ +R++ WN ++TG + G A+ FR M + + W ++
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 602 GLFRK 606
F +
Sbjct: 125 SGFAQ 129
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 50/487 (10%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V K + H ++ NA LS F K +L +A +F +M +R+ S N +I K G+
Sbjct: 60 HHVFDK-IPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYE 118
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL Y M VKP TF V CGG+ D+ G+ H V++ G+++++ V NA
Sbjct: 119 RQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNA 178
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY KCG A VF+G+ + + +++ M+ G + + +GL LF +M + D
Sbjct: 179 LLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVD 238
Query: 298 FMTLSSVI------------SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
++LS+++ S + G+++H +K GF D+ +CN L+ MY
Sbjct: 239 SVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAK 298
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ + E VF ++ VVSW MIS Y +KA+E +Q M+ G PD++T ++
Sbjct: 299 TGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINM 358
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L+AC G++ +G ++F + ++
Sbjct: 359 LTACVKSGDVKVG-----------------------------------RQIFDCMSSPSL 383
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAH 524
ISW +I+ G + EA+ FRKM + P+ TL ILS+CA +G L GK++HA
Sbjct: 384 ISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAV 443
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALA 583
+ ++G D ++ ++L+++Y +CG+M+ + + F+ +E DV WN ++ G++ A
Sbjct: 444 SQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDA 503
Query: 584 EEFFRKM 590
F++M
Sbjct: 504 LACFKRM 510
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 268/549 (48%), Gaps = 51/549 (9%)
Query: 60 TKNPNSRLNELCLNGSLEQALKYLDSMQEL-NICVDEDALVNLVRLCEWKRGYDEGLYLH 118
T + N+ + + NG QAL D M ++ + C + + G H
Sbjct: 102 TVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNH 161
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+V K ++ + NA L M+ K G A+ VF + + + ++ ++GG ++
Sbjct: 162 GLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVK 221
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCG-----GVPDLKRG-------KEVHVHVIRF 226
E L L+ R+ G+ D + +L C GV D RG K++H ++
Sbjct: 222 EGLELF-RLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKH 280
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+E D+ + N+L+ MY K GD+ A VF+ + K +SWN MISGY + K L F
Sbjct: 281 GFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECF 340
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ +PD +T ++++A GD K+GR+
Sbjct: 341 QRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQ--------------------------- 373
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
+F M S ++SW ++S Y S +AVE ++ M+ + PD T+A +L
Sbjct: 374 --------IFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
S+CA LG L+ G ++H ++ + G + +A++LI++YSKC ++ + VF ++ + +V+
Sbjct: 426 SSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVV 485
Query: 467 SWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
W S+I G +N+ +AL F++M P+ + +I S+CA++ +L G++IHA
Sbjct: 486 CWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQI 545
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAE 584
++ G + F+ ++L++MY +CG + A F+ +++ WN ++ GYA G G A
Sbjct: 546 IKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAV 605
Query: 585 EFFRKMIDS 593
++ MI S
Sbjct: 606 SLYKDMISS 614
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 255/535 (47%), Gaps = 60/535 (11%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLC---------EWKRGYD---EGLYLHSVVSK 123
+++ L+ M ICVD +L ++ +C + RG +G +H++ K
Sbjct: 220 VKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVK 279
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L N+ L M+ K GD+ A VF + + SWN++I GY ++AL
Sbjct: 280 HGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALEC 339
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+QRM + CG PD DV +N ++T V
Sbjct: 340 FQRM-----------------QCCGYEPD------------------DVTYIN-MLTACV 363
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ R +FD M ISWNA++SGY ++ ++ + + LF M+ +PD TL+
Sbjct: 364 KSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAI 423
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++S+ +G + G++VH K+GF DDV V + LI +Y G E + VFS++ D
Sbjct: 424 ILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELD 483
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV W +MI+ + + L A+ ++ M G P E + A++ S+CA L +L G ++H
Sbjct: 484 VVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHA 543
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ G + + + ++L++MY KC + A F +P KN+++W +I G N E
Sbjct: 544 QIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLE 603
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPNA 539
A+ ++ M+ + KP+ +T V++L+AC+ + G EI + L+ + D +
Sbjct: 604 AVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHY--TC 661
Query: 540 LLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGAL----AEEFFR 588
++D R GR ++ + D W ++L+ +L AEE R
Sbjct: 662 IIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHR 716
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 195/433 (45%), Gaps = 79/433 (18%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L++C L K +H + RF +D + N LI +Y KC + A VFD +P ++
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMM---------------------REVL-------- 293
S+NA++S + ++ LF+ M R+ L
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 294 ---VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V P +T ++V SA + D GR HG V+K+GF ++ V N L+ MY G E
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +VF + + V++TTM+ + + +E +++M +G D ++++++L CA
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250
Query: 411 -------C-----LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
C L G ++H LA++ G + + N+L+DMY+K +D A VF
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+ +V+SW +I G S +AL F++M +P+ VT +++L+AC + G +
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAER 577
G++I FD +L+ +WN +L+GY +
Sbjct: 371 GRQI----------FDCMSSPSLI------------------------SWNAILSGYNQS 396
Query: 578 GQGALAEEFFRKM 590
A E FRKM
Sbjct: 397 ADHGEAVELFRKM 409
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ + ++L +C +L +H R L S + N LID+YSKC I A VF +
Sbjct: 6 LNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDK 65
Query: 460 IPDKNVISWTSIILGL-RLNNRSF------------------------------EALIFF 488
IP KN+ S+ +I+ + NN + +AL +
Sbjct: 66 IPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTY 125
Query: 489 RKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
MM+ ++KP+ +T ++ SAC + + CG+ H L++G + ++ NALL MY +
Sbjct: 126 DLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTK 185
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
CG + A+ F E + + ++ G ++ Q E FR M+
Sbjct: 186 CGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLML 231
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +N + AL M++ E + + C +G +H+ + K
Sbjct: 488 NSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIK 547
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V +G++ + M+ K GD+G A Y F M +++ +WN +I GYA G+ EA+SL
Sbjct: 548 DGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSL 607
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMY 242
Y+ M G KPD TF VL C + G E+ ++ +F +D +I
Sbjct: 608 YKDMI-SSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCL 666
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMIS 271
+ G ++ D MP K D I W ++S
Sbjct: 667 GRVGRFNEVEVILDTMPYKDDTIVWEVVLS 696
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ S+ L+++L +C +L K IHA R + D FL N L+D+Y +C ++ A
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ F+ +++ ++N +L+ + + A F +M
Sbjct: 61 HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQM 97
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 240/462 (51%), Gaps = 15/462 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ ++M+ K + A +F ++F++N +I G+ GF +E YQ+M G
Sbjct: 76 TSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM-RNEG 134
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD +TFPC ++ C V ++K+ +H + +FG E DV + +AL+ Y+K G + A+
Sbjct: 135 VIPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ F+ +P RD + WNAM++GY + G++ L F M + V P T++ V+S ++G
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMG 251
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D GR +HG+ +KMG+ V+V N LI MY E+ ++F M KD+ SW +++S
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-- 430
+E D + M G PD +T+ +VL AC+ L L G ++H + +GL
Sbjct: 312 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGK 371
Query: 431 ----ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
I +++ N +IDMY+KC + A VF ++ +K+V SW +I+G ++ EAL
Sbjct: 372 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALE 431
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMY 544
F +M + LKP+ VT V +LSAC+ G + G+ + VA ++DM
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 545 VRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
R G++ A+ + E + W LL LAE
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 533
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 219/407 (53%), Gaps = 14/407 (3%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF-DGMPKRDRISWNAMI 270
+L +GKE+H +++ G+ + +LI MY KC + A +F D + + ++NA+I
Sbjct: 52 NLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAII 111
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
SG+ NG +G + MR V PD T I A V + K ++HG + K G
Sbjct: 112 SGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLE 168
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
DV + + L+ YL FG E + F + +DVV W M++ Y + +ET++ M
Sbjct: 169 LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRM 228
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
E +P T+ VLS A +G+L+ G +H AM+ G S + ++N+LIDMY KCKCI
Sbjct: 229 NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCI 288
Query: 451 DKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSAC 509
+ ALE+F + +K++ SW SI+ + + + + R + ++P+ VT+ ++L AC
Sbjct: 289 EDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPAC 348
Query: 510 ARIGALMCGKEIHAHALRIGVAFDG------FLPNALLDMYVRCGRMKPAWNQFNS-NER 562
+ + ALM G+EIH + + G+ DG L NA++DMY +CG M+ A F + +
Sbjct: 349 SHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
DV++WNI++ GY G G A E F +M + K + +G+ C
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 21/446 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHS 119
N+ ++ NG E+ ++ M+ + D+ ++ C E K+ +H
Sbjct: 108 NAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKK-------IHG 160
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
++ K L V +G+A ++ ++KFG + HA F ++ RD+ WN ++ GYA+ G F+
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++RM V P +T VL + DL G+ +H ++ GY++ V V N+LI
Sbjct: 221 VLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A +F+ M ++D SWN+++S + + G++ L L M + PD +
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS------DDVSVCNPLIKMYLSFGNREEGE 353
T+++V+ A + GRE+HGY+I G DDV + N +I MY G+ +
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF RM +KDV SW MI Y ++A+E + M PDE+T VLSAC+ G
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 459
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
+ G L Q+ + + I +IDM + +D+A E+ +P + N + W ++
Sbjct: 460 FVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP 497
+ RL+ + A + ++ + L+P
Sbjct: 520 LAACRLHKHAVLAEVAAQR-VFELEP 544
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF--- 457
T + L A A NL G ++H + G ++ + +LI+MYSKC ++ AL +F
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 458 -HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGAL 515
H+I NV ++ +II G N E F++KM + P+ T + AC + +
Sbjct: 99 THEI---NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI 155
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGY 574
K+IH + G+ D F+ +AL++ Y++ G M+ A F RDV WN ++ GY
Sbjct: 156 ---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 575 AERGQGALAEEFFRKMID 592
A+ GQ + E FR+M D
Sbjct: 213 AQIGQFEMVLETFRRMND 230
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N T ++ L A A L GKEIH++ L G +L++MY +C +M A + F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 558 N--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++E +V A+N +++G+ G EF++KM
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM 130
>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 237/489 (48%), Gaps = 44/489 (8%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H RL N +L M+V G + A +F +M +R L SW +++ GYA+ G E L ++
Sbjct: 48 HARTRLFNLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWD 107
Query: 187 MFWVGG---VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
M G ++PD + F VLR CG V L G+ VH V++ D V NAL++MY
Sbjct: 108 MLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYG 167
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
CG L A +VF G+ K D + W++++SGY +NG +GL +F M ++PD S
Sbjct: 168 SCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSM 227
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + G + H Y+IKMGF + + N L+ Y G+ E +VFS M K+
Sbjct: 228 VLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKN 287
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW T I+ Y + +A+ +Q++ E S D+ ++ S+L A + LG+LD G ++H
Sbjct: 288 LVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHG 347
Query: 424 LAMRTGLISYIIIANTLIDMYSKC------------------------------------ 447
+R G+ + + ++L+DMY C
Sbjct: 348 YILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKW 407
Query: 448 ----KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
++ A VF ++ + W+++I G N EAL FRKM + +K N T
Sbjct: 408 CSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTF 467
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER 562
S++ AC + L GKE+H LR G + + N L+++Y + K A +
Sbjct: 468 TSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPD 527
Query: 563 DVSAWNILL 571
+WN L+
Sbjct: 528 SEISWNFLI 536
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 257/533 (48%), Gaps = 46/533 (8%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
++R C G +H +V K S + + NA +SM+ G L A VFG + D
Sbjct: 127 VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 186
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L W+ ++ GY K G +E L ++ M GG++PD + F VL C + G + H
Sbjct: 187 LVGWSSILSGYVKNGLEEEGLRIFCDMV-SGGIEPDAFAFSMVLGACTNLECWDFGTQAH 245
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++I+ G+++ + + N+L+ Y KCGDL R VF M +++ +SWN I+GY N Y+
Sbjct: 246 CYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYL 305
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L +F ++ E + D +L S++ A +G G+E+HGY+++ G + V + L+
Sbjct: 306 EALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLL 365
Query: 341 KMYLSFGNRE----------------EG------------------------EKVFSRME 360
MY+ + E EG ++VF+R+E
Sbjct: 366 DMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVE 425
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D W+ +IS + + +A++ ++ M+ +G +E T SV+ AC L NL G +
Sbjct: 426 QPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKE 485
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH +R+G S + NTLI++YS+ +AL++ IPD ISW +I L
Sbjct: 486 LHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRAC-LGAE 543
Query: 481 SFEAL--IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+E + + +R + + + V+ I ++C+ L G + HA+ + G+ + N
Sbjct: 544 DYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISN 603
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+L+ MY CG+ A FN E+D +W +L+ E G + A +M
Sbjct: 604 SLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQM 656
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 228/490 (46%), Gaps = 59/490 (12%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+ L+ M I D A ++ C +D G H + K + L
Sbjct: 200 NGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYL 259
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + + K GDL VF M +++L SWN I GY + EAL ++Q +
Sbjct: 260 ENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQ-ILMEEV 318
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD----- 247
+ D ++ +L+ G+ L GKE+H +++R G E + VV++L+ MY+ C D
Sbjct: 319 SQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLY 378
Query: 248 -----------------------------------LVRARLVFDGMPKRDRISWNAMISG 272
L A+ VF + + D W+A+ISG
Sbjct: 379 PRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISG 438
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ NG + + L LF M+ + + T +SVI A + + + G+E+H +++ G+ +
Sbjct: 439 HSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESN 498
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME- 391
SV N LI +Y ++ K+ S + + +SW +I G+ E Y+++
Sbjct: 499 FSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRACLGA-------EDYEIIHK 550
Query: 392 -------AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ G++ D ++ + ++C+ L++G + H + GLIS+ I+N+LI MY
Sbjct: 551 LLWRIQVSHGNL-DPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMY 609
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLV 503
S C D+A++ F+ +P+K+ SWTSI+ + EAL +M KP + T
Sbjct: 610 SACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFR 669
Query: 504 SILSACARIG 513
S+L+ACA++G
Sbjct: 670 SVLNACAQMG 679
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 6/272 (2%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
VF ++ D W+ LI G++ G F EAL L+++M + G+K + +TF V+ C +
Sbjct: 420 VFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQF-DGIKANEFTFTSVILACLALE 478
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+L++GKE+H ++R GYE++ VVN LI +Y + +A + +P + ISWN +I
Sbjct: 479 NLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIR 537
Query: 272 GYF--ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
E+ E + L+ I + +DP ++ + ++ +G + H Y+ K G
Sbjct: 538 ACLGAEDYEIIHKLLWRIQVSHGNLDP--VSACDIFASCSSPVLLNVGTQAHAYMTKRGL 595
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
++ N LI+MY + G +E + F+ M KD SWT+++S P +A+
Sbjct: 596 ISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQ 655
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
M + D+ T SVL+ACA +G +D +L
Sbjct: 656 MRWKNKPADQSTFRSVLNACAQMGLVDEAFRL 687
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGS 395
N ++MY++ G +E K+F M + +VSWT ++S Y + + + M+ G
Sbjct: 55 NLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGG 114
Query: 396 ---MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD A VL AC + L G +H L ++ + + N L+ MY C ++
Sbjct: 115 GLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALED 174
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A VF I +++ W+SI+ G N E L F M+ ++P++ +L AC
Sbjct: 175 AAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTN 234
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ G + H + +++G +L N+L+D Y +CG ++ F+ +E+++ +WN
Sbjct: 235 LECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTF 294
Query: 571 LTGYAERGQGALAEEFFRKMID 592
+ GY A F+ +++
Sbjct: 295 INGYVHNFHYLEALRIFQILME 316
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 246/463 (53%), Gaps = 11/463 (2%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S + KF DL A VF + + + SWN+++ + G EAL LY++M GVK
Sbjct: 68 LISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKM-RESGVKT 126
Query: 196 DVYTFPCVLRTCGGV-PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D +TFP + R + D+ GK VH ++ G+ D+ N +I +Y +CG + R++
Sbjct: 127 DAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGRVM 186
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD M RD +SW +MISGY G LF MR + ++P+ +TL ++ +
Sbjct: 187 FDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMR-LEMEPNSVTLIVMLKGCYAYDNF 245
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
GR++H Y+IK G SV N +++MY G+ +E E +F + +DV+SW T+I Y
Sbjct: 246 SEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFY 305
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++ V + M E ++ E T+ V+S A +GNL G KLH +++ GL +
Sbjct: 306 ALRGDAEEMVCGFNQMRGEVALSSE-TLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDV 364
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++A +L+D Y+KC + ++++F +IP ++ +W ++ G N EA+ FR+M +
Sbjct: 365 LLA-SLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQAS 423
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALR----IGVAFDGFLPNALLDMYVRCGR 549
++ + L S++ AC+ +G+L KEIH + R I + L ++L+MY+RCG
Sbjct: 424 GVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGS 483
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ A FN +D W ++ GY G A + F +M+
Sbjct: 484 ISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQML 526
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 217/430 (50%), Gaps = 18/430 (4%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + ++ + G + + +F +M RDL SW +I GY G A L+ +M +
Sbjct: 168 NTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRL--EM 225
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ T +L+ C + G+++H ++I+ G V N+++ MY G
Sbjct: 226 EPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVES 285
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVG 312
+F + +RD ISWN +I Y G+ + + F MR EV + + +TL VIS +G
Sbjct: 286 LFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTL--VISVFAKIG 343
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ G ++H + IK+G DDV + + L+ Y G ++F + + +W M+S
Sbjct: 344 NLVEGEKLHSFSIKVGLCDDVLLAS-LLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMS 402
Query: 373 -CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
C + D+A+ ++ M+A G + S++ AC+ LG+L L ++H R
Sbjct: 403 GCIQNGYF-DEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRN--F 459
Query: 432 SYII------IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
YI+ + ++++MY +C I A E F+++ K+ I+WTS+I G ++ + EAL
Sbjct: 460 FYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEAL 519
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH-AHALRIGVAFDGFLPNALLDM 543
F +M++ + PN VT +S+LSAC+ G + G E+ + G+ D ++D+
Sbjct: 520 KLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDL 579
Query: 544 YVRCGRMKPA 553
RCG++K A
Sbjct: 580 LGRCGKIKEA 589
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 199/385 (51%), Gaps = 10/385 (2%)
Query: 212 DLKRGKEVHVHV-IRFGYEADVDVVNA-LITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
DL+ K++H + + G+ + + LI+ Y K DL A VF + + + +SWN +
Sbjct: 40 DLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLI 99
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS-ELVGDEKLGREVHGYVIKMG 328
+ + + G + L+L+ MRE V D T ++ A L D LG+ VH +K+G
Sbjct: 100 MRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLG 159
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVET 386
F D+ CN +I++Y G G +F M +D+VSWT+MIS Y EG+V A E
Sbjct: 160 FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFS--AFEL 217
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M E P+ +T+ +L C N G +LH ++ GL+ Y + N+++ MYS
Sbjct: 218 FNKMRLEME-PNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSI 276
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
+ +F +I ++VISW ++I L + E + F +M + +S TL ++
Sbjct: 277 TGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVI 336
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVS 565
S A+IG L+ G+++H+ ++++G+ D L +LLD Y +CG ++ + F R S
Sbjct: 337 SVFAKIGNLVEGEKLHSFSIKVGLC-DDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSS 395
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
W ++++G + G A FR+M
Sbjct: 396 TWKLMMSGCIQNGYFDEAIHLFRQM 420
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 219/443 (49%), Gaps = 17/443 (3%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G++ A + + M+ L + + L+ +++ C + EG LH + K + +
Sbjct: 209 GNVFSAFELFNKMR-LEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQ 267
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L M+ G +F ++ RD+ SWN LIG YA G +E + + +M G V
Sbjct: 268 NSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQM--RGEV 325
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
T V+ + +L G+++H I+ G DV ++ +L+ Y KCG+L +
Sbjct: 326 ALSSETLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDV-LLASLLDFYAKCGELRNSVQ 384
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
+F +P R +W M+SG +NG + + + LF M+ V L S++ A +G
Sbjct: 385 LFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGS 444
Query: 314 EKLGREVHGYVIKMGF----SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+L +E+HGY+ + F D++ + ++ MY+ G+ + F+RM +KD ++WT+
Sbjct: 445 LQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTS 504
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-- 427
MI Y + +A++ + M E +P+ +T S+LSAC+ G + G +L L+M+
Sbjct: 505 MIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELF-LSMKWV 563
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQ---IPDKNVISWTSIILGLRLNNRSFEA 484
G+ + ++D+ +C I +AL + + + D + W +++ R++ +
Sbjct: 564 FGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRI--WGALVASCRVHGDK-KV 620
Query: 485 LIFFRKMMLNLKPNSVTLVSILS 507
F + +L ++ ++V ++LS
Sbjct: 621 GEFAAQRLLEMESDNVGYYTLLS 643
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 41/366 (11%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG LHS K V L + L + K G+L ++ +FG++ R +W +++ G
Sbjct: 347 EGEKLHSFSIKVGLCDDVLLA-SLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCI 405
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEAD 231
+ G+FDEA+ L+++M GV+ ++ C + L+ KE+H ++ R F Y +
Sbjct: 406 QNGYFDEAIHLFRQM-QASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILE 464
Query: 232 VDVVN---ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
D ++ +++ MY++CG + AR F+ M +D I+W +MI GY +G ++ L LF
Sbjct: 465 GDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQ 524
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M V P+ +T S++SA H +I+ G C + M FG
Sbjct: 525 MLVERVLPNRVTFLSLLSACS-----------HSGLIRQG-------CELFLSMKWVFG- 565
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
ME D+ +T M+ K E M+ + D +++++
Sbjct: 566 ----------ME-PDLDHYTCMVDLLGRC---GKIKEALAMIIRMVVVADSRIWGALVAS 611
Query: 409 CACLGNLDLGIKLHQ--LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
C G+ +G Q L M + + Y + + + M K +++ +V H+ +
Sbjct: 612 CRVHGDKKVGEFAAQRLLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTP 671
Query: 467 SWTSII 472
W+ I+
Sbjct: 672 GWSCIV 677
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 270/542 (49%), Gaps = 42/542 (7%)
Query: 73 NGSLEQALKYLDSMQELNI-----CVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
NG LE + LD+ + + + V V L+ C LH + KT +
Sbjct: 51 NGRLEAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTI 110
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ + + + ++++++ G+ A +F +M ++++ +W LI GY AL ++ M
Sbjct: 111 VDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEM 170
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+G P YT +L C ++ GK+VH + I++G + + N+L +Y K G+
Sbjct: 171 LKLGRY-PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGN 229
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVIS 306
L F +P ++ I+W MIS E+ Y + GL LF+ M + V P+ TL+SV+S
Sbjct: 230 LESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMS 289
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
D LG++V G+ K+G + ++ V N + +YL G EE ++F ME V++
Sbjct: 290 LCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVIT 349
Query: 367 WTTMISCYE---GSVLPD--------KAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
W MIS + S D +A++ ++ + PD T +S+LS C+ + L
Sbjct: 350 WNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMAL 409
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G ++H ++TG +S +++ + L++MY+KC CI+ A + F ++P + +++WTS+I G
Sbjct: 410 EQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGY 469
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGAL--------MCGKEIHAHAL 526
+ R +A+ F M+L KPN +T VS+LSAC+ G + M E H L
Sbjct: 470 SQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPL 529
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAW-----NQFNSNERDVSAWNILLTGYAERGQGA 581
D + ++DM+VR GR+ A+ F NE + W+ L+ G G
Sbjct: 530 -----MDHY--GCMIDMFVRLGRLDDAYAFIKRKGFEPNE---AIWSSLVAGCRSHGNME 579
Query: 582 LA 583
LA
Sbjct: 580 LA 581
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 227/421 (53%), Gaps = 16/421 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L C L K +H H+++ G D+ V +L+ +Y++CG+ AR +FD MP+++
Sbjct: 84 LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKN 143
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W A+I+GY N + + L +F+ M ++ P TL ++SA + LG++VHG
Sbjct: 144 VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHG 203
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPD 381
Y IK G + S+ N L ++Y GN E G + F R+ K+V++WTTMIS C E +
Sbjct: 204 YTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTE 263
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ + M MP+E T+ SV+S C +++LG ++ + G + + + N+ +
Sbjct: 264 LGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTM 323
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALIFFRK 490
+Y + ++A+ +F ++ D +VI+W ++I G L +R F+AL FR
Sbjct: 324 YLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRD 383
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++ + +KP+ T SILS C+ + AL G++IHA ++ G D + +AL++MY +CG
Sbjct: 384 LVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRK 606
++ A F R + W +++GY++ G+ A + F MI +K N + L
Sbjct: 444 IEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSA 503
Query: 607 C 607
C
Sbjct: 504 C 504
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 209/449 (46%), Gaps = 16/449 (3%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LN AL+ M +L + L ++ C D G +H K +
Sbjct: 156 LNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITS 215
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE-ALSLYQRMFWV 190
+GN+ ++ K G+L F ++ D+++ +W +I A+ + E L+L+ M
Sbjct: 216 IGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDML-K 274
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G V P+ +T V+ CG D+ GK+V + G ++ V N+ + +Y++ G+
Sbjct: 275 GEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEE 334
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMK--------GLMLFIMMREVL---VDPDFM 299
A +F+ M I+WNAMISG+ + + K G + R+++ + PD
Sbjct: 335 AMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLF 394
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T SS++S + + G ++H IK GF DV V + L+ MY G E K F M
Sbjct: 395 TFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEM 454
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++ +V+WT+MIS Y P A++ ++ M G+ P+EIT S+LSAC+ G ++ +
Sbjct: 455 PTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAM 514
Query: 420 KLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ + I ++ +IDM+ + +D A + + N W+S++ G R
Sbjct: 515 RYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCR- 573
Query: 478 NNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
++ + E + +L LKP V +L
Sbjct: 574 SHGNMELAFYAADRLLELKPKVVETYVLL 602
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 244/446 (54%), Gaps = 9/446 (2%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ +A +F + + ++NV+I G A D AL L+++M V+ D +TF VL+
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE-KSVQHDKFTFSSVLK 129
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C + L+ G++VH +++ G++++ V N LI MY CG + AR VFDGMP+R ++
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN+M+SGY +NG + + + LF + E+ ++ D +T+ SV+ A + + ++G + Y++
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
G + ++ LI MY G + K+F M+ +DVV+W+ MIS Y + +A+
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M+ P+E+T+ SVL +CA LG + G +H + + + + LID Y+
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
KC ID+++EVF ++ KNV +WT++I GL N AL FF M+ N +KPN VT +
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSN-- 560
+LSAC+ + G+ + +++R + + + ++D+ R G ++ A+ QF N
Sbjct: 430 VLSACSHACLVDQGRHLF-NSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY-QFIDNMP 487
Query: 561 -ERDVSAWNILLTGYAERGQGALAEE 585
+ W LL +AE+
Sbjct: 488 FPPNAVVWRTLLASCRAHKNIEMAEK 513
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 211/411 (51%), Gaps = 9/411 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI-TMYVKCGDLVRARL-VFDGMPK 260
+L+ C DL+ +VH H+++ D + A++ + + D + L +F+ + K
Sbjct: 27 ILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+ ++N MI G L+LF M E V D T SSV+ A + + G +V
Sbjct: 84 PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H ++K GF + V N LI+MY + G VF M + +V+W +M+S Y + L
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
D+ V+ ++ + D++T+ SVL AC L NL++G + + + GL + +L
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNS 499
IDMY+KC +D A ++F ++ ++V++W+++I G +R EAL F +M N+ PN
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
VT+VS+L +CA +GA GK +H + + + L L+D Y +CG + + F
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
++V W L+ G A G+G +A EFF M+ D K N +G+ C
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSAC 434
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 229/472 (48%), Gaps = 18/472 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N + L S + AL M E ++ D+ ++++ C + EG +H+++ K
Sbjct: 90 NVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILK 149
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N + M+ G +G A +VF M +R + +WN ++ GY K G +DE + L
Sbjct: 150 SGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKL 209
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++++ + ++ D T VL CG + +L+ G+ + +++ G + + +LI MY
Sbjct: 210 FRKILELR-IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYA 268
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR +FD M KRD ++W+AMISGY + + L LF M++ V P+ +T+ S
Sbjct: 269 KCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVS 328
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ + ++G + G+ VH Y+ K V++ LI Y G + +VF M K+
Sbjct: 329 VLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKN 388
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC--ACLGNLDLGIKL 421
V +WT +I + A+E + M P+++T VLSAC ACL +D G L
Sbjct: 389 VFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACL--VDQGRHL 446
Query: 422 HQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
R I I ++D+ + +++A + +P N + W +++ R +
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRA-H 505
Query: 480 RSFEALIFFRKMMLNLKP----------NSVTLVSILSACARIGALMCGKEI 521
++ E + + L+P N+ LV + R+ +L+ KEI
Sbjct: 506 KNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEI 557
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 233/460 (50%), Gaps = 47/460 (10%)
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G L LY+ + G +PD TFP +L+ C + + G HV+R G ++DV V
Sbjct: 103 GVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFV 162
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREV 292
VNA G + AR +FD P RD +SWN +I GY G + L LF ++ +
Sbjct: 163 VNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDA 222
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+V PD +T+ + +S + D +LGR +HG+V G S V + N L+ MY+ G+ E
Sbjct: 223 VVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMA 282
Query: 353 EKVFSRMESKDVVSWTTMISCY-----------------EGSVLP--------------D 381
+ VF R+E + VVSWTTMI + E V P
Sbjct: 283 KSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCK 342
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+ + M+ +PDEIT+ ++L+AC+ LG L++G+ +H+ + L+ + + +LI
Sbjct: 343 EALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLI 402
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY+KC I+KA+ +F +IP+KN ++WT++I GL + + EA+ FR M+ L KP+ +
Sbjct: 403 DMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEI 462
Query: 501 TLVSILSACARIGALMCGKEIHA------HALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
T + +LSAC G + G+E + H R + + ++D+ R G + A
Sbjct: 463 TFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHY-----SCMIDLLGRAGHLDEAE 517
Query: 555 NQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N+ E D W + +G +L E+ K+++
Sbjct: 518 QLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVE 557
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 192/411 (46%), Gaps = 38/411 (9%)
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
RL EW GY + H V + V + NA G + A +F + RDL
Sbjct: 137 RLREW--GYGDAALAH--VLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLV 192
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SWN LIGGY + G EAL L+ RM V+PD T + CG + DL+ G+ +H
Sbjct: 193 SWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHG 252
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLV-------------------------------R 250
V G V ++NAL+ MY+KCG L
Sbjct: 253 FVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDD 312
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VFD MP+RD WNA+++GY + + + L LF M+E V PD +T+ ++++A
Sbjct: 313 ARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQ 372
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G ++G VH Y+ K V++ LI MY GN E+ +F + K+ ++WT M
Sbjct: 373 LGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAM 432
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL-AMRTG 429
I ++A+E ++ M G PDEIT VLSAC G + G + L +
Sbjct: 433 ICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYH 492
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
L + + +ID+ + +D+A ++ + +P + + + W +I R+
Sbjct: 493 LERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQG 543
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 165/405 (40%), Gaps = 88/405 (21%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE ++ V C R + G LH V +VRL NA + M++K G L A VF
Sbjct: 227 DEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVF 286
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFD-------------------------------EALS 182
++ R + SW +I G+AK G D EALS
Sbjct: 287 ERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALS 346
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M V PD T +L C + L+ G VH ++ + V + +LI MY
Sbjct: 347 LFHEM-QEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMY 405
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG++ +A +F +P+++ ++W AMI G +G + + F M E+ PD +T
Sbjct: 406 AKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFI 465
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+SA H ++K EG + FS ME+K
Sbjct: 466 GVLSAC-----------CHAGLVK------------------------EGREFFSLMETK 490
Query: 363 -----DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ ++ MI + D+A + M E PD + ++ AC GN+ L
Sbjct: 491 YHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPME---PDAVVWGAIFFACRMQGNISL 547
Query: 418 GIKLHQLAMRTGLIS------YIIIANTLIDMYSKCKCIDKALEV 456
G K AM+ I Y+++AN MY++ KA +V
Sbjct: 548 GEK---AAMKLVEIDPSDSGIYVLLAN----MYAEANMRKKADKV 585
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL MQE ++ DE +VNL+ C + G+++H + K SV LG +
Sbjct: 342 KEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSL 401
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G++ A ++F ++ +++ +W +I G A G +EA+ ++ M +G KPD
Sbjct: 402 IDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQ-KPD 460
Query: 197 VYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
TF VL C +K G+E + ++ E + + +I + + G L A +
Sbjct: 461 EITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 520
Query: 256 DGMP-KRDRISWNAM 269
+ MP + D + W A+
Sbjct: 521 NTMPMEPDAVVWGAI 535
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 280/557 (50%), Gaps = 19/557 (3%)
Query: 55 TSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYD 112
+S + T +P+ + L G Q L++ + + V ++++ C + +
Sbjct: 24 SSVVPTHSPSDHIKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHA 83
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH + T S+ + N+ +SM+ KF D+ A VF M RD +WN +I Y
Sbjct: 84 FGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYL 143
Query: 173 KAGFFDEALSLYQRMFWVGGV-KPDVYTFPCVLRTCGGVPDL--KRGKEVHVHVI---RF 226
+ G EAL + + +++G + KP++ ++ CG DL + G+++H V+ R
Sbjct: 144 QNGLLVEALQMLKDFYFLGFLPKPEL--LASMVSMCGREMDLGWRIGRQIHGLVVVDGRI 201
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
+ V + A + Y +CGD + AR VFD M ++ +SW A+ISG N +Y L +
Sbjct: 202 RIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACY 261
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ V P+ +TL ++++A G K G+E+HGY + GF S LI +Y
Sbjct: 262 REMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCEC 321
Query: 347 GNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G E++F +DVV W+++I Y DKA++ + M E + P+ +T+ +V
Sbjct: 322 GQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAV 381
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+SAC L + G +H ++ G+ I + N LI+MY+KC +D + ++F ++P ++
Sbjct: 382 ISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDS 441
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
++W S+I L+ +AL F +M +K ++VT +++LSAC G + G+++
Sbjct: 442 VTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQ 501
Query: 525 A---LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQ 579
I + + + L+D++ R G+++ A + SA W+ L++ G+
Sbjct: 502 VNADCEIPITIEHY--ACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGR 559
Query: 580 GALAEEFFRKMIDSKGN 596
+AE ++I S+ N
Sbjct: 560 LDIAESLSSQLIRSEPN 576
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 229/456 (50%), Gaps = 13/456 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC--EWKRGYDEGLYLHSVV 121
NS +N NG L +AL+ L L + L ++V +C E G+ G +H +V
Sbjct: 136 NSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLV 195
Query: 122 ---SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ SV L AF+ + + GD A VF +M ++ SW +I G A +D
Sbjct: 196 VVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYD 255
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
AL+ Y+ M V GV P+ T +L C +K GKE+H + R G+++ AL
Sbjct: 256 VALACYREM-QVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPAL 314
Query: 239 ITMYVKCGD-LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
I +Y +CG L A +F+G RD + W+++I Y GE K L LF MR +P+
Sbjct: 315 IYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPN 374
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
++TL +VISA + K G +HGY++K G + VCN LI MY G+ ++ K+F
Sbjct: 375 YVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFL 434
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M S+D V+W +MIS Y ++A++ + M+ G D +T +VLSAC G +
Sbjct: 435 EMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTE 494
Query: 418 GIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGL 475
G +L Q+ + I LID++ + ++ ALE+ +P K + W+S++
Sbjct: 495 GQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSC 554
Query: 476 RLNNRSFEALIFFRKMMLNLKPN---SVTLVSILSA 508
+L+ R + ++ +PN S TL+S++ A
Sbjct: 555 KLHGR-LDIAESLSSQLIRSEPNNAASYTLLSMIHA 589
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 239/475 (50%), Gaps = 3/475 (0%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V + L + N L+M+ K G L A +F +M +R++ S+ L+ +A+ G F
Sbjct: 84 HVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF 143
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+ A +L++R+ W G + + + +L+ + VH + G++ + V +
Sbjct: 144 EAAAALFRRLRWEGH-EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSG 202
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI Y C + A VF+G+ ++D + W AM+S Y EN +F MR P+
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
L+SV+ A+ + LG+ +HG IK + V L+ MY G+ ++ F
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ DV+ + MIS Y S ++A E + + +P+E +++SVL AC + LD
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H A++ G S + + N L+D Y+KC +D +L++F + D N +SW +I++G
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 442
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+ EAL F +M P VT S+L ACA ++ +IH + D +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N+L+D Y +CG ++ A F ERD+ +WN +++GYA GQ A A E F +M
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 17/432 (3%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L +M +L I +D L V C WK G+D ++ G+ + +
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFV---------------GSGLIDAYSL 209
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
+ A +VF + +D W ++ Y++ + A ++ +M V G KP+ +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTS 268
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ +P + GK +H I+ + + V AL+ MY KCGD+ ARL F+ +P D
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I + MIS Y ++ + + LF+ + V P+ +LSSV+ A + G+++H
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ IK+G D+ V N L+ Y + + K+FS + + VSW T++ + S L ++
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M+A ++T +SVL ACA ++ ++H ++ + +I N+LID
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
Y+KC I AL+VF + ++++ISW +II G L+ ++ +AL F +M N++ N +T
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568
Query: 502 LVSILSACARIG 513
V++LS C+ G
Sbjct: 569 FVALLSVCSSTG 580
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 205/402 (50%), Gaps = 6/402 (1%)
Query: 195 PDVYTFPCV--LRTCGGVPDLKRGKEVHVHVIRFGYEADVDV--VNALITMYVKCGDLVR 250
P V +F C L+ C D + G+ VH HV+R G +D+ N L+ MY K G L
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +FD MP+R+ +S+ ++ + + G++ LF +R + + L++++ +
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ L VH K+G + V + LI Y + E VF+ + KD V WT M
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+SCY + P+ A + M G P+ + SVL A CL ++ LG +H A++T
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
+ + L+DMY+KC I A F IP +VI + +I +N++ +A +F R
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M ++ PN +L S+L AC + L GK+IH HA++IG D F+ NAL+D Y +C
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
M + F+S + + +WN ++ G+++ G G A F +M
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM 456
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 190/396 (47%), Gaps = 4/396 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H KT++ +G A L M+ K GD+ A F + D+ + +I YA+
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ ++A L+ R+ V P+ Y+ VL+ C + L GK++H H I+ G+E+D+
Sbjct: 342 SNQNEQAFELFLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ Y KC D+ + +F + + +SWN ++ G+ ++G + L +F M+
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ +T SSV+ A + ++H + K F++D + N LI Y G +
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL 520
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + +D++SW +IS Y A+E + M ++IT ++LS C+ G
Sbjct: 521 KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Query: 414 NLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSI 471
++ G+ L + + G+ + ++ + + ++ AL+ IP + + W ++
Sbjct: 581 LVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRAL 640
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ + +++ F + +L ++P T +LS
Sbjct: 641 LSSCII-HKNVALGRFSAEKILEIEPQDETTYVLLS 675
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 4/287 (1%)
Query: 312 GDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GD + GR VHG+V++ G D+ N L+ MY G ++F RM +++VS+ T
Sbjct: 73 GDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVT 132
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++ + + A ++ + EG ++ + ++L + L +H A + G
Sbjct: 133 LVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLG 192
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + LID YS C + A VF+ I K+ + WT+++ N+ A F
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFS 252
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
KM ++ KPN L S+L A + +++ GK IH A++ + + ALLDMY +CG
Sbjct: 253 KMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCG 312
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+K A F DV + +++ YA+ Q A E F +++ S
Sbjct: 313 DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQA + + ++ +E +L ++++ C D G +H+ K + +GNA
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + K D+ + +F + D + SWN ++ G++++G +EALS++ M +
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM-QAAQMPCT 464
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T+ VLR C ++ ++H + + + D + N+LI Y KCG + A VF
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV---DPDFMTLSSVISASELV 311
+ +RD ISWNA+ISGY +G+ L LF M + V D F+ L SV S++ LV
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLV 582
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL MQ + + +++R C +H + K+ + +GN+
Sbjct: 447 EEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSL 506
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + K G + A VF + +RD+ SWN +I GYA G +AL L+ RM V+ +
Sbjct: 507 IDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN-KSNVESN 565
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
TF +L C + G + + I G + ++ ++ + + G L A
Sbjct: 566 DITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFI 625
Query: 256 DGMPKR-DRISWNAMIS 271
+P + W A++S
Sbjct: 626 GDIPSAPSAMVWRALLS 642
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 239/475 (50%), Gaps = 3/475 (0%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V + L + N L+M+ K G L A +F +M +R++ S+ L+ +A+ G F
Sbjct: 84 HVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF 143
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+ A +L++R+ W G + + + +L+ + VH + G++ + V +
Sbjct: 144 EAAAALFRRLRWEGH-EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSG 202
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI Y C + A VF+G+ ++D + W AM+S Y EN +F MR P+
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
L+SV+ A+ + LG+ +HG IK + V L+ MY G+ ++ F
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFE 322
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ DV+ + MIS Y S ++A E + + +P+E +++SVL AC + LD
Sbjct: 323 MIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDF 382
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H A++ G S + + N L+D Y+KC +D +L++F + D N +SW +I++G
Sbjct: 383 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 442
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+ EAL F +M P VT S+L ACA ++ +IH + D +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N+L+D Y +CG ++ A F ERD+ +WN +++GYA GQ A A E F +M
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 221/437 (50%), Gaps = 17/437 (3%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L +M +L I +D L V C WK G+D ++ G+ + +
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFV---------------GSGLIDAYSL 209
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
+ A +VF + +D W ++ Y++ + A ++ +M V G KP+ +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTS 268
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ +P + GK +H I+ + + V AL+ MY KCGD+ ARL F+ +P D
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I + MIS Y ++ + + LF+ + V P+ +LSSV+ A + G+++H
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ IK+G D+ V N L+ Y + + K+FS + + VSW T++ + S L ++
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M+A ++T +SVL ACA ++ ++H ++ + +I N+LID
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
Y+KC I AL+VF + ++++ISW +II G L+ ++ +AL F +M N++ N +T
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568
Query: 502 LVSILSACARIGALMCG 518
V++LS C+ G + G
Sbjct: 569 FVALLSVCSSTGLVNHG 585
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 205/402 (50%), Gaps = 6/402 (1%)
Query: 195 PDVYTFPCV--LRTCGGVPDLKRGKEVHVHVIRFGYEADVDV--VNALITMYVKCGDLVR 250
P V +F C L+ C D + G+ VH HV+R G +D+ N L+ MY K G L
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +FD MP+R+ +S+ ++ + + G++ LF +R + + L++++ +
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ L VH K+G + V + LI Y + E VF+ + KD V WT M
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+SCY + P+ A + M G P+ + SVL A CL ++ LG +H A++T
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
+ + L+DMY+KC I A F IP +VI + +I +N++ +A +F R
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M ++ PN +L S+L AC + L GK+IH HA++IG D F+ NAL+D Y +C
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
M + F+S + + +WN ++ G+++ G G A F +M
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM 456
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 190/396 (47%), Gaps = 4/396 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H KT++ +G A L M+ K GD+ A F + D+ + +I YA+
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ ++A L+ R+ V P+ Y+ VL+ C + L GK++H H I+ G+E+D+
Sbjct: 342 SNQNEQAFELFLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ Y KC D+ + +F + + +SWN ++ G+ ++G + L +F M+
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ +T SSV+ A + ++H + K F++D + N LI Y G +
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL 520
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + +D++SW +IS Y A+E + M ++IT ++LS C+ G
Sbjct: 521 KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Query: 414 NLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSI 471
++ G+ L + + G+ + ++ + + ++ AL+ IP + + W +
Sbjct: 581 LVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA- 639
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+L + +++ F + +L ++P T +LS
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLS 675
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 312 GDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GD + GR VHG+V++ G D+ N L+ MY G ++F RM +++VS+ T
Sbjct: 73 GDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVT 132
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++ + + A ++ + EG ++ + ++L + L +H A + G
Sbjct: 133 LVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLG 192
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + LID YS C + A VF+ I K+ + WT+++ N+ A F
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFS 252
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
KM ++ KPN L S+L A + +++ GK IH A++ + + ALLDMY +CG
Sbjct: 253 KMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCG 312
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+K A F DV + +++ YA+ Q A E F +++ S
Sbjct: 313 DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 358
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQA + + ++ +E +L ++++ C D G +H+ K + +GNA
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + K D+ + +F + D + SWN ++ G++++G +EALS++ M +
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM-QAAQMPCT 464
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T+ VLR C ++ ++H + + + D + N+LI Y KCG + A VF
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV---DPDFMTLSSVISASELV 311
+ +RD ISWNA+ISGY +G+ L LF M + V D F+ L SV S++ LV
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLV 582
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL MQ + + +++R C +H + K+ + +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ + + K G + A VF + +RD+ SWN +I GYA G +AL L+ RM
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN-KSN 561
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVKCGDLVRA 251
V+ + TF +L C + G + + I G + ++ ++ + + G L A
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 621
Query: 252 RLVFDGMPKR-DRISWNAMIS 271
+P + W A++S
Sbjct: 622 LQFIGDIPSAPSAMVWRALLS 642
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 257/494 (52%), Gaps = 15/494 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLV----RLCEWKRGYDEGLYLHSVVSKT-MSHLSVR 131
E A K M++L + ++ D+ V L+ + G +G +H+ V +T ++ V
Sbjct: 365 EAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA 423
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN ++M+ K G + A VF M ++D SWN LI G + ++A + RM G
Sbjct: 424 IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTG 483
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ P +T L +C + + G+++H ++ G + DV V NAL+ +Y + G
Sbjct: 484 SM-PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 542
Query: 252 RLVFDGMPKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF MP+ D++SWN++I ++ + + F+ M +T +++SA
Sbjct: 543 LKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSS 602
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTT 369
+ ++ ++H V+K SDD ++ N L+ Y G E EK+F+RM E++D VSW +
Sbjct: 603 LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNS 662
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y + L KA++ M +G D T A++LSACA + L+ G+++H +R
Sbjct: 663 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 722
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L S +++ + L+DMYSKC ID A F +P +NV SW S+I G + +AL F
Sbjct: 723 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 782
Query: 490 KMMLNLK-PNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMYV 545
+MML+ + P+ VT V +LSAC+ +G + G E + R+ + F + ++D+
Sbjct: 783 RMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHF--SCMVDLLG 840
Query: 546 RCGRMKPAWNQFNS 559
R G++ + NS
Sbjct: 841 RAGKLDEVGDFINS 854
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 241/470 (51%), Gaps = 13/470 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ +A +S F +FG A +F +M R++ S N L+ G K + A ++ M +
Sbjct: 319 VSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLV 378
Query: 192 GVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDL 248
G+ D Y + V + ++G+EVH HVIR G + V + N L+ MY K G +
Sbjct: 379 GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 438
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF+ M ++D +SWN++ISG +N F MR P TL S +S+
Sbjct: 439 ADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSC 498
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G LG ++H +K+G DVSV N L+ +Y G E KVFS M D VSW
Sbjct: 499 ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 558
Query: 369 TMI---SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
++I S E SV +AV+ + M G +T ++LSA + L ++ ++H L
Sbjct: 559 SVIGALSDSEASV--SQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 616
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEA 484
++ L I N L+ Y KC +++ ++F ++ + ++ +SW S+I G N +A
Sbjct: 617 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 676
Query: 485 --LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L++F M + +S T +ILSACA + L G E+HA +R + D + +AL+D
Sbjct: 677 MDLVWF-MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVD 735
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
MY +CGR+ A F R+V +WN +++GYA G G A + F +M+
Sbjct: 736 MYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 785
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 259/518 (50%), Gaps = 16/518 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK--RGYDEGLYLHSVVSKTMSHLSV 130
NG ++A M + A + +R C+ G G+ +H ++SKT V
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 131 RLGNAFLSMFVKFGDLGH-AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N +SM+ D + A VF + R+ SWN +I Y++ G A L+ M
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 190 VG---GVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
G KP+ YTF ++ T D L +++ V + G+ D+ V +AL++ + +
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---VDPDFMTL 301
G A+ +F+ M R+ +S N ++ G + + +F M++++ D + L
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLL 389
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDD-VSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+ S L + GREVH +VI+ G +D+ V++ N L+ MY G + VF M
Sbjct: 390 SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 449
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD VSW ++IS + + + A E++ M GSMP T+ S LS+CA LG + LG +
Sbjct: 450 EKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 509
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ GL + + ++N L+ +Y++ C + L+VF +P+ + +SW S+I L +
Sbjct: 510 IHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEA 569
Query: 481 SF-EALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
S +A+ +F +MM + VT ++ILSA + + +IHA L+ ++ D + N
Sbjct: 570 SVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 629
Query: 539 ALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGY 574
ALL Y +CG M F S RD +WN +++GY
Sbjct: 630 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 667
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 248/484 (51%), Gaps = 23/484 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++++V+ GDLG A +F +M +R+L +W LI GY + G DEA + ++ M G
Sbjct: 108 LSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAG 167
Query: 192 GVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ P+ Y F LR C G K G ++H + + Y +DV V N LI+MY C D
Sbjct: 168 FI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 226
Query: 250 R-ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE----VLVDPDFMTLSSV 304
AR VFDG+ R+ ISWN++IS Y G+ + LF M++ P+ T S+
Sbjct: 227 NDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSL 286
Query: 305 ISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
I+ + D L ++ V K GF D+ V + L+ + FG ++ + +F +M +
Sbjct: 287 ITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVR 346
Query: 363 DVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIK- 420
+VVS ++ + A + + +M + G D + +LSA + L+ G +
Sbjct: 347 NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRK 404
Query: 421 ---LHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+H +RTGL + + I N L++MY+K I A VF + +K+ +SW S+I GL
Sbjct: 405 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 464
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N S +A F +M P++ TL+S LS+CA +G +M G++IH L++G+ D
Sbjct: 465 QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 524
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE-RGQGALAEEFFRKMIDS 593
+ NALL +Y G F+ E D +WN ++ ++ + A ++F +M+
Sbjct: 525 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM-- 582
Query: 594 KGNW 597
+G W
Sbjct: 583 RGGW 586
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 205/409 (50%), Gaps = 19/409 (4%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF ++ G + +E+H+ I++G+ ++ + N LI +YV+ GDL A+ +FD M
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KL 316
R+ ++W +ISGY +NG+ + F M P+ S + A + G KL
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLS-FGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G ++HG + K + DV VCN LI MY S + + VF + ++ +SW ++IS Y
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252
Query: 376 GSVLPDKAVETYQMMEAEG----SMPDEITIASVLSACACLGNLDLGI-KLHQLAMR--- 427
A + + M+ EG P+E T S+++ AC ++D G+ L Q+ R
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITT-AC-SSVDFGLCVLEQMLARVEK 310
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G + + +++ L+ +++ D A +F Q+ +NV+S +++GL + A
Sbjct: 311 SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGAL----MCGKEIHAHALRIGVAFDGF-LPNALLD 542
F +M + NS + V +LSA + L G+E+HAH +R G+ + + N L++
Sbjct: 371 FHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 430
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY + G + A + F E+D +WN L++G + A E F +M
Sbjct: 431 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRM 479
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 11/290 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
RE+H IK GF ++ + N LI +Y+ G+ +K+F M ++++V+W +IS Y
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG--NLDLGIKLHQLAMRTGLISYI 434
+ PD+A ++ M G +P+ S L AC G LG+++H L +T S +
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 435 IIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++ N LI MY C + A VF I +N ISW SII + A F M
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 493 ----LNLKPNSVTLVS-ILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ KPN T S I +AC+ + +C +++ A + G D ++ +AL+ + R
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
G A N F R+V + N L+ G ++ QG A + F +M D G
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG 379
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N L +A+ + M + +D ++ C + G+ +H+ +
Sbjct: 661 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIR 720
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G+A + M+ K G + +A F M R+++SWN +I GYA+ G ++AL L
Sbjct: 721 ACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 780
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ RM + G PD TF VL C V ++ G E
Sbjct: 781 FTRMM-LDGQPPDHVTFVGVLSACSHVGFVEEGFE 814
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 249/471 (52%), Gaps = 10/471 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + ++ + M+ + G LG A +F +M +RD+ +W ++ G + G + + +M
Sbjct: 150 SVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMI 209
Query: 189 WVGG---VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G +P+ T L CG + +L G+ +H + ++ G VV+AL +MY KC
Sbjct: 210 RLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKC 269
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
A ++F + ++D +SW +I Y G + + LF M + + PD + +S V+
Sbjct: 270 DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVL 329
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S + G+ H +I+ F D V + N LI MY F + VF + +D
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGS---MPDEITIASVLSACACLGNLDLGIKLH 422
SW+ M++ Y + L K +E Y+ M+ + D ++ S +S+C+ LG L LG +H
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRS 481
+++ L+ I N+LI MY +C + A ++F ++V++W ++I RS
Sbjct: 450 CYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRS 508
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+AL + +M+ ++KPNS TL++++SACA + AL G+ +H++ +G+ D + AL
Sbjct: 509 NDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTAL 568
Query: 541 LDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY +CG++ A F+S +RDV WN++++GY G+ A + F +M
Sbjct: 569 VDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEM 619
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 251/510 (49%), Gaps = 21/510 (4%)
Query: 115 LYLHSVVSKTMSHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
L LH++ S S LS R +S + G G A F D F WN L+ +
Sbjct: 32 LRLHALAST--SGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHH 89
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY---E 229
A FD ALS ++RM G +P +T P + L G VH + ++FG +
Sbjct: 90 CASDFDSALSAHRRMR-ASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGD 148
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V V ++L+ MY +CG L A +FD M +RD ++W A++SG NGE KG+ + M
Sbjct: 149 GSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQM 208
Query: 290 REVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
+ D P+ T+ S + A ++G+ GR +HGY +K G D V + L MY
Sbjct: 209 IRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSK 268
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
E+ +F + KDVVSWT +I Y L +AVE +Q ME G PDE+ ++ V
Sbjct: 269 CDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCV 328
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
LS N++ G H + +R ++IAN+LI MY K + +D A VF + ++
Sbjct: 329 LSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDD 388
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMML----NLKPNSVTLVSILSACARIGALMCGKEI 521
SW+ ++ G + L +R+M + +LVS +S+C+R+G L G+ +
Sbjct: 389 ESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSV 448
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQ 579
H ++++ + + + N+L+ MY RCG + A F + RDV WN L++ Y+ G+
Sbjct: 449 HCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGR 507
Query: 580 GALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + +M+ D K N L+ + C
Sbjct: 508 SNDALSLYGQMLTEDVKPNSSTLITVISAC 537
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 211/393 (53%), Gaps = 7/393 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A SM+ K A +F ++ ++D+ SW LIG Y + G EA+ L+Q M G+
Sbjct: 260 SALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQ-SGL 318
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD CVL G ++ RGK H +IR + V + N+LI+MY K + A
Sbjct: 319 QPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGT 378
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVISASEL 310
VF + +RD SW+ M++GY + G +K L L+ M+ D D +L S IS+
Sbjct: 379 VFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSR 438
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTT 369
+G +LG+ VH Y IK D+ S+ N LI MY GN E K+F+ + +DVV+W
Sbjct: 439 LGRLRLGQSVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNA 497
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y + A+ Y M E P+ T+ +V+SACA L L+ G LH G
Sbjct: 498 LISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMG 557
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L S + I+ L+DMY+KC + A +F + ++V++W +I G ++ + +AL F
Sbjct: 558 LESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFS 617
Query: 490 KMML-NLKPNSVTLVSILSACARIGALMCGKEI 521
+M ++KPNS+T ++ILSAC G + G+++
Sbjct: 618 EMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL 650
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 208/433 (48%), Gaps = 25/433 (5%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
C G +A++ M++ + DE + ++ + G H+V+ + SV
Sbjct: 298 CRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSV 357
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ +SM+ KF + A VFG + RD SW++++ GY KAG + L LY++M
Sbjct: 358 LIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCR 417
Query: 191 GGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+ D+ + + +C + L+ G+ VH + I+ + + + N+LI MY +CG+
Sbjct: 418 DHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN-SITNSLIGMYGRCGNF 476
Query: 249 VRARLVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
A +F +RD ++WNA+IS Y G L L+ M V P+ TL +VISA
Sbjct: 477 ELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISA 536
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + G +H YV MG DVS+ L+ MY G +F M +DVV+W
Sbjct: 537 CANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTW 596
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MIS Y ++A++ + MEA P+ +T ++LSAC G +D G KL +R
Sbjct: 597 NVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLF---IR 653
Query: 428 TGLISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSII--------- 472
G Y + N ++D+ K + +A ++ +P K + W +++
Sbjct: 654 MG--GYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNF 711
Query: 473 -LGLRLNNRSFEA 484
+GLR+ ++F +
Sbjct: 712 EMGLRVAKKAFSS 724
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 235/435 (54%), Gaps = 6/435 (1%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ WN + + + G EA+ + M V D TF +L G+ L+ GK++
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMI-NSRVACDGLTFVVMLTVVAGLNCLELGKQI 957
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V+R G + V V N LI MYVK G + RAR VF M + D ISWN MISG +G
Sbjct: 958 HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017
Query: 280 MKGLMLFI-MMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ +F+ ++R+ L+ PD T++SV+ A S L G L ++H +K G D V
Sbjct: 1018 ECSVGMFVHLLRDSLL-PDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVST 1076
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI +Y G EE E +F + D+ SW ++ Y S KA+ Y +M+ G
Sbjct: 1077 ALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERS 1136
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D+IT+ + A L L G ++H + ++ G + + + ++DMY KC ++ A VF
Sbjct: 1137 DQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVF 1196
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+IP + ++WT++I G N + AL + +M L+ ++P+ T +++ AC+ + AL
Sbjct: 1197 SEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALE 1256
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYA 575
G++IHA+ +++ AFD F+ +L+DMY +CG ++ A F +N R +++WN ++ G A
Sbjct: 1257 QGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLA 1316
Query: 576 ERGQGALAEEFFRKM 590
+ G A +FF+ M
Sbjct: 1317 QHGNAKEALQFFKYM 1331
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 237/457 (51%), Gaps = 6/457 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H +V ++ V +GN ++M+VK G + A VFG+M + DL SWN +I G
Sbjct: 954 GKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTL 1013
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADV 232
+G + ++ ++ + + PD +T VLR C + ++H ++ G D
Sbjct: 1014 SGLEECSVGMFVHLLR-DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDS 1072
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V ALI +Y K G + A +F D SWNA++ GY +G++ K L L+I+M+E
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQES 1132
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D +TL + A+ + K G+++H V+K GF+ D+ V + ++ MYL G E
Sbjct: 1133 GERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESA 1192
Query: 353 EKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+VFS + S D V+WTTMIS C E + A+ TY M PDE T A+++ AC+
Sbjct: 1193 RRVFSEIPSPDDVAWTTMISGCVENG-QEEHALFTYHQMRLSKVQPDEYTFATLVKACSL 1251
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L L+ G ++H ++ + +L+DMY+KC I+ A +F + + + SW ++
Sbjct: 1252 LTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAM 1311
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIG 529
I+GL + + EAL FF+ M + P+ VT + +LSAC+ G + E ++ G
Sbjct: 1312 IVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYG 1371
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA 566
+ + + L+D R GR++ A +S + SA
Sbjct: 1372 IEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASA 1408
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 231/501 (46%), Gaps = 33/501 (6%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
L + ++C LH K V + A ++++ KFG + A +F M
Sbjct: 763 LAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA 822
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD+ WNV++ Y EA+ L+ F G +PD T + R ++ K
Sbjct: 823 VRDVVLWNVMMKAYVDTCLEYEAMLLFSE-FHRTGFRPDDVTLRTLSRVVKCKKNILELK 881
Query: 218 EVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ + + F Y+ D D I WN +S + +
Sbjct: 882 QFKAYATKLFMYDDD----------------------------GSDVIVWNKALSRFLQR 913
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
GE + + F+ M V D +T +++ + +LG+++HG V++ G VSV
Sbjct: 914 GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI MY+ G+ VF +M D++SW TMIS S L + +V + + + +
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033
Query: 397 PDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD+ T+ASVL AC+ L G L ++H AM+ G++ ++ LID+YSK +++A
Sbjct: 1034 PDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEF 1093
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
+F ++ SW +I+ G ++ +AL + M + + + +TLV+ A +
Sbjct: 1094 LFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVG 1153
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L GK+IHA ++ G D F+ + +LDMY++CG M+ A F+ D AW +++G
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213
Query: 574 YAERGQGALAEEFFRKMIDSK 594
E GQ A + +M SK
Sbjct: 1214 CVENGQEEHALFTYHQMRLSK 1234
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 173/386 (44%), Gaps = 37/386 (9%)
Query: 197 VYTFP---CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+++ P +LR DL GK H ++ G+ D V N LITMY KCG L AR
Sbjct: 653 IHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARK 712
Query: 254 VFDGMP--KRDRISWNAMISGYFENGE-YMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+FD P RD ++WNA++S + + G LF ++R +V TL+ V L
Sbjct: 713 LFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+HGY +K+G DV V L+ +Y FG E +F M +DVV W M
Sbjct: 773 SASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVM 832
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL-AMRTG 429
+ Y + L +A+ + G PD++T+ ++ C N+ ++L Q A T
Sbjct: 833 MKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNI---LELKQFKAYATK 889
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L Y +VI W + ++EA+ F
Sbjct: 890 LFMY-------------------------DDDGSDVIVWNKALSRFLQRGEAWEAVDCFV 924
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M+ + + + +T V +L+ A + L GK+IH +R G+ + N L++MYV+ G
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAG 984
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTG 573
+ A + F NE D+ +WN +++G
Sbjct: 985 SVSRARSVFGQMNEVDLISWNTMISG 1010
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S+L +L LG + H + +G + N LI MY+KC + A ++F PD
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 464 N--VISWTSIILGLRLN-NRSFEALIFFRKMMLNLKPNSV-TLVSILSACARIGALMCGK 519
N +++W +I+ L + ++S + FR + ++ + TL + C + +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
+H +A++IG+ +D F+ AL+++Y + G ++ A F+ RDV WN+++ Y +
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
F L I+AS+L LG+ H ++ G D V N LI MY G+ K+F
Sbjct: 660 FSILRQAIAASDL----SLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFD 715
Query: 358 RM--ESKDVVSWTTMISCYEGSVLPDKA---VETYQMMEAEGSMPDEITIASVLSACACL 412
++D+V+W ++S DK+ ++++ T+A V C
Sbjct: 716 TTPDTNRDLVTWNAILSALAAHA--DKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLS 773
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ LH A++ GL + +A L+++Y+K I +A +F + ++V+ W ++
Sbjct: 774 ASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMM 833
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
+EA++ F + +P+ VTL ++ ++ K+ A+A ++
Sbjct: 834 KAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL--- 890
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ ++ + DV WN L+ + +RG+ A + F MI
Sbjct: 891 ---FM--------------------YDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMI 927
Query: 592 DSK 594
+S+
Sbjct: 928 NSR 930
>gi|222623987|gb|EEE58119.1| hypothetical protein OsJ_09011 [Oryza sativa Japonica Group]
Length = 1112
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 245/469 (52%), Gaps = 23/469 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + KT + + + N+ LS++ GD A +FG+M DRD+ SW +IG +G+
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL L++ M G ++PD VLR C + D++ G VH R G + D+ V N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY KC DL AR VFD + ++ +SWN M+SG G Y + L L + ++ V
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLAL--QIGVVG 327
Query: 297 DFMTLSSVISASELVGDEKLG----REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D TL+ ++ +L ++LG R VHG I+ +++ N L+ Y G E+
Sbjct: 328 DETTLAVLL---QLCKKKRLGGQAARSVHGAAIRRRLL-SMALLNALLDAYGKCGLVEDV 383
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F M ++V++W+T+I+ + P A+ + M G P+ IT+ S++ AC
Sbjct: 384 LRLFQGMRERNVITWSTVIAACAHNARPHAAMACFVAMLVTGERPNSITVLSLVEACGSC 443
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + H +A+R+GL + + N L+ MY KC + + VF +P K+V++W S+I
Sbjct: 444 AEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVKDVLTWNSMI 503
Query: 473 LGLRLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACARIG----ALMCGKEIHAHA 525
L +N R+ +AL +M ++PN VT+++ L ACA G + C + + +
Sbjct: 504 GALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIGCLESMARQS 563
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLT 572
L+ V + ++DM R G + A + +S +AW+ LL+
Sbjct: 564 LQPRVEH----VSCVVDMLARAGDLDGAAEIVRRSSGGGSPAAWSALLS 608
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 182/399 (45%), Gaps = 19/399 (4%)
Query: 71 CL-NGSLEQALKYLDSMQELNICVDEDALVNLV--RLCEWKRGYDEGLYLHSVVSKTMSH 127
CL +G +QAL+ M + + D +V +V R C G +H+V ++
Sbjct: 204 CLGSGYADQALRLFREMLA-DGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQ 262
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ + N+ + M+ K DL A VF + +++ SWN ++ G AG + EAL L
Sbjct: 263 GDLFVDNSLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQ 322
Query: 188 FWVGGVKPDVYTFPCVLRTC-----GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
GV D T +L+ C GG + + VH IR + ++NAL+ Y
Sbjct: 323 I---GVVGDETTLAVLLQLCKKKRLGG----QAARSVHGAAIRRRL-LSMALLNALLDAY 374
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + +F GM +R+ I+W+ +I+ N + F+ M P+ +T+
Sbjct: 375 GKCGLVEDVLRLFQGMRERNVITWSTVIAACAHNARPHAAMACFVAMLVTGERPNSITVL 434
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S++ A + R HG ++ G +++V N L+ MY G +VF M K
Sbjct: 435 SLVEACGSCAEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVK 494
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSACACLGNLDLGIK 420
DV++W +MI + A+ MEAEG P+ +T+ + L ACA G ++ GI
Sbjct: 495 DVLTWNSMIGALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIG 554
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ R L + + ++DM ++ +D A E+ +
Sbjct: 555 CLESMARQSLQPRVEHVSCVVDMLARAGDLDGAAEIVRR 593
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++T + +AN+L+ +Y+ A +F ++PD++V SWTS+I +
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 481 SFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +AL FR+M+ + L+P+ V V +L ACA + + G +HA A R G+ D F+ N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVAVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNW 597
+L+DMY +C ++ A F+ ++V +WN +L+G G A I G+
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQIGVVGDE 329
Query: 598 RKLMGLFRKCQ 608
L L + C+
Sbjct: 330 TTLAVLLQLCK 340
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 241/479 (50%), Gaps = 3/479 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
++ H V + L + N L+M+ K G L A +F +M +R++ S+ L+ +A+
Sbjct: 80 AVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQ 139
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G F+ A +L++R+ W G + + + +L+ + VH + G++ +
Sbjct: 140 RGDFEAAAALFRRLRWEGH-EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAF 198
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V + LI Y C + A VF+G+ ++D + W AM+S Y EN +F MR
Sbjct: 199 VGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSG 258
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ L+SV+ A+ + LG+ +HG IK + V L+ MY G+ ++
Sbjct: 259 CKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDAR 318
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
F + DV+ + MIS Y S ++A E + + +P+E +++SVL AC +
Sbjct: 319 LAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMV 378
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LD G ++H A++ G S + + N L+D Y+KC +D +L++F + D N +SW +I++
Sbjct: 379 QLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVV 438
Query: 474 GLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G + EAL F +M P VT S+L ACA ++ +IH +
Sbjct: 439 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 498
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + N+L+D Y +CG ++ A F ERD+ +WN +++GYA GQ A A E F +M
Sbjct: 499 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRM 557
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 17/432 (3%)
Query: 83 LDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK 142
L +M +L I +D L V C WK G+D ++ G+ + +
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFV---------------GSGLIDAYSL 209
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
+ A +VF + +D W ++ Y++ + A ++ +M V G KP+ +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTS 268
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ +P + GK +H I+ + + V AL+ MY KCGD+ ARL F+ +P D
Sbjct: 269 VLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDD 328
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I + MIS Y ++ + + LF+ + V P+ +LSSV+ A + G+++H
Sbjct: 329 VILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN 388
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ IK+G D+ V N L+ Y + + K+FS + + VSW T++ + S L ++
Sbjct: 389 HAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M+A ++T +SVL ACA ++ ++H ++ + +I N+LID
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
Y+KC I AL+VF + ++++ISW +II G L+ ++ +AL F +M N++ N +T
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568
Query: 502 LVSILSACARIG 513
V++LS C+ G
Sbjct: 569 FVALLSVCSSTG 580
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 205/402 (50%), Gaps = 6/402 (1%)
Query: 195 PDVYTFPCV--LRTCGGVPDLKRGKEVHVHVIRFGYEADVDV--VNALITMYVKCGDLVR 250
P V +F C L+ C D + G+ VH HV+R G +D+ N L+ MY K G L
Sbjct: 55 PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR +FD MP+R+ +S+ ++ + + G++ LF +R + + L++++ +
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIA 174
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ L VH K+G + V + LI Y + E VF+ + KD V WT M
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+SCY + P+ A + M G P+ + SVL A CL ++ LG +H A++T
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
+ + L+DMY+KC I A F IP +VI + +I +N++ +A +F R
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M ++ PN +L S+L AC + L GK+IH HA++IG D F+ NAL+D Y +C
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
M + F+S + + +WN ++ G+++ G G A F +M
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM 456
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 190/396 (47%), Gaps = 4/396 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H KT++ +G A L M+ K GD+ A F + D+ + +I YA+
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ ++A L+ R+ V P+ Y+ VL+ C + L GK++H H I+ G+E+D+
Sbjct: 342 SNQNEQAFELFLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ Y KC D+ + +F + + +SWN ++ G+ ++G + L +F M+
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ +T SSV+ A + ++H + K F++D + N LI Y G +
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL 520
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + +D++SW +IS Y A+E + M ++IT ++LS C+ G
Sbjct: 521 KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Query: 414 NLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSI 471
++ G+ L + + G+ + ++ + + ++ AL+ IP + + W ++
Sbjct: 581 LVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRAL 640
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ + +++ F + +L ++P T +LS
Sbjct: 641 LSSCII-HKNVALGRFSAEKILEIEPQDETTYVLLS 675
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 312 GDEKLGREVHGYVIKMGFSD--DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
GD + GR VHG+V++ G D+ N L+ MY G ++F RM +++VS+ T
Sbjct: 73 GDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVT 132
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++ + + A ++ + EG ++ + ++L + L +H A + G
Sbjct: 133 LVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLG 192
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + LID YS C + A VF+ I K+ + WT+++ N+ A F
Sbjct: 193 HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFS 252
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
KM ++ KPN L S+L A + +++ GK IH A++ + + ALLDMY +CG
Sbjct: 253 KMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCG 312
Query: 549 RMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+K A F DV + +++ YA+ Q A E F +++ S
Sbjct: 313 DIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 358
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
EQA + + ++ +E +L ++++ C D G +H+ K + +GNA
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ + K D+ + +F + D + SWN ++ G++++G +EALS++ M +
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM-QAAQMPCT 464
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T+ VLR C ++ ++H + + + D + N+LI Y KCG + A VF
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV---DPDFMTLSSVISASELV 311
+ +RD ISWNA+ISGY +G+ L LF M + V D F+ L SV S++ LV
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLV 582
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E+AL MQ + + +++R C +H + K+ + +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ + + K G + A VF + +RD+ SWN +I GYA G +AL L+ RM
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN-KSN 561
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVKCGDLVRA 251
V+ + TF +L C + G + + I G + ++ ++ + + G L A
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 621
Query: 252 RLVFDGMPKR-DRISWNAMIS 271
+P + W A++S
Sbjct: 622 LQFIGDIPSAPSAMVWRALLS 642
>gi|147774530|emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
Length = 664
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 269/577 (46%), Gaps = 79/577 (13%)
Query: 4 AFCAKTSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP 63
A + TP R +TR+ PK + FS K+A + + + TKNP
Sbjct: 70 AIYSDNQTTPSRPTQTQFRTRLKS------PKKKPFSEKDAFPMSL-------PLHTKNP 116
Query: 64 N---SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSV 120
+ S + G L++AL LD + I V+ +L+R C V
Sbjct: 117 HAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRAC--------------V 162
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
SK+++H G Y EA
Sbjct: 163 ESKSLTH-------------------GRRHY--------------------------REA 177
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
LS Y M +G V+ +VY+F C++++ G ++G + H +I+ G + +LI
Sbjct: 178 LSTYSEMRELG-VELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLID 236
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG + ARL+F+ + +RD + W AMI+G+ N + L MR + P+ +
Sbjct: 237 MYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVI 296
Query: 301 LSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
+++++ VG KLGREVH YV+K +S V + + LI MY G+ G +VF
Sbjct: 297 MTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYAS 356
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++ VSWT ++S Y + D+A+ + M+ EG PD +T+A+VL CA L L G
Sbjct: 357 TERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGK 416
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H A++ G + + IA +L+ MYSKC +D + ++F + +NVISWT++I N
Sbjct: 417 EIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENG 476
Query: 480 RSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
EA+ FR M L+ +P+SV + ILS C + L GKEIH L+ F+
Sbjct: 477 CLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSA 536
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
++ MY + G + A F + + AW ++ Y
Sbjct: 537 EIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAY 573
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 164/325 (50%), Gaps = 13/325 (4%)
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
Y + L + MRE+ V+ + + S +I + + G + H +IK G D +
Sbjct: 173 HYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRT 232
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
LI MY G + +F + +DVV W MI+ + + L +A+E + M EG P
Sbjct: 233 SLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICP 292
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEV 456
+ + + ++L +G LG ++H ++T S + I + LIDMY KC + +V
Sbjct: 293 NSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQV 352
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F+ ++N +SWT+++ G N R +AL M +P+ VT+ ++L CA + AL
Sbjct: 353 FYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRAL 412
Query: 516 MCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
GKEIH++A++ +GFLPN +L+ MY +CG + ++ F+ + R+V +W
Sbjct: 413 RQGKEIHSYAVK-----NGFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTA 467
Query: 570 LLTGYAERGQGALAEEFFRKMIDSK 594
++ Y E G A FR M SK
Sbjct: 468 MIDSYVENGCLHEAVGVFRSMQLSK 492
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 1/237 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L+QAL+ + MQ+ D + ++ +C R +G +HS K +V +
Sbjct: 374 NGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSI 433
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ + M+ K G+L +++ +F M R++ SW +I Y + G EA+ +++ M +
Sbjct: 434 ATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSM-QLSK 492
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+PD +L CG + LK GKE+H +++ +E+ V +I MY K G + +A+
Sbjct: 493 HRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAK 552
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
L F +P + ++W A+I Y N Y + LF M+ P+ T +V+S E
Sbjct: 553 LAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICE 609
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 241/493 (48%), Gaps = 15/493 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L +H++ + + L +S + G G A F D F WN LI +
Sbjct: 28 ELLRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHH 87
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY---E 229
A F ALS ++RM G +P +T P + L G VH + +R+G +
Sbjct: 88 CASDFVAALSAHRRML-ASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGD 146
Query: 230 AD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
D V V ++L+ MY +CG++ A VF+ MP+RD ++W A+ISG NGE +GL +
Sbjct: 147 GDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVE 206
Query: 289 MREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
M + D P+ T+ S + A ++ + GR +HGYV+K+G D V + L MY
Sbjct: 207 MVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYS 266
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
+ E+ +F + KDVVSWT++I Y L +A+E +Q M G PDEI ++
Sbjct: 267 KCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSC 326
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VLS GN+ G H + + ++I N LI MY K + +D A VF + ++
Sbjct: 327 VLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRD 386
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSACARIGALMCGKE 520
SW +++G + L +R+M L K + +LVS +S+C+R+ L G+
Sbjct: 387 ADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRS 446
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERG 578
H ++++ + D + N L+ MY RCG+ A F + DV WN L++ YA G
Sbjct: 447 AHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLG 506
Query: 579 QGALAEEFFRKMI 591
A + +M+
Sbjct: 507 HSNAAMSLYDQML 519
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 244/473 (51%), Gaps = 13/473 (2%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
SV + ++ + M+ + G++ A VF +M +RD+ +W +I G + G E L M
Sbjct: 149 SVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMV 208
Query: 189 WVGG---VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
+ G V+P+ T L CG + +L G+ +H +V++ G V++AL +MY KC
Sbjct: 209 RLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKC 268
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
A +F +P++D +SW ++I Y G + + LF M E + PD + +S V+
Sbjct: 269 YSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVL 328
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S G+ G+ H + K F D V + N LI MY F + +VF + +D
Sbjct: 329 SGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDAD 388
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGS-----MPDEITIASVLSACACLGNLDLGIK 420
SW M+ Y + K +E Y+ M+ + D ++ S +S+C+ L L LG
Sbjct: 389 SWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISSCSRLAELRLGRS 446
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNN 479
H +++ L +AN LI MY +C D A ++F K +V++W ++I
Sbjct: 447 AHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLG 506
Query: 480 RSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
S A+ + +M++ L PNS TL++++SACA + AL G++IH++ +G +D +
Sbjct: 507 HSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINT 566
Query: 539 ALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +CG++ A F+S + DV AWN++++GY G+ A E F KM
Sbjct: 567 ALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKM 619
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 248/514 (48%), Gaps = 18/514 (3%)
Query: 73 NGSLEQALKYLDSMQEL----NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
NG + L+YL M L ++ + + + + C + G LH V K
Sbjct: 194 NGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGD 253
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S + +A SM+ K A +F ++ ++D+ SW LIG Y + G EA+ L+Q+M
Sbjct: 254 SPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMM 313
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G++PD CVL G ++ GK H + + + V + NALI+MY K +
Sbjct: 314 -ESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMV 372
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM------TLS 302
A VF + +RD SWN M+ GY + G +K L L+ RE+ + + +L
Sbjct: 373 DSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELY---REMQLRDKYEFWCVADSLV 429
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S IS+ + + +LGR H Y IK +D SV N LI MY G + K+F + K
Sbjct: 430 SAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLK 489
Query: 363 -DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
DVV+W T+IS Y + A+ Y M EG P+ T+ +V+SACA L L+ G K+
Sbjct: 490 GDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKI 549
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H G + I LIDMY+KC + A +F + +V++W +I G ++ +
Sbjct: 550 HSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEA 609
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+AL F KM ++KPN VT ++ILSA G L G+++ + + + +
Sbjct: 610 KQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACM 669
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
+D+ + G ++ A + + E D W LL+
Sbjct: 670 VDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLS 703
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 206/435 (47%), Gaps = 28/435 (6%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLS 129
C G + +A++ M E + DE LV+ V G G H+V++K S
Sbjct: 297 CRRGLITEAMELFQQMMESGLQPDE-ILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDS 355
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +GNA +SM+ KF + A VF + RD SWN+++ GY KAG + L LY+ M
Sbjct: 356 VLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQL 415
Query: 190 VGGVKPDVYTFPCV-------LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
D Y F CV + +C + +L+ G+ H + I+ + D V N LI MY
Sbjct: 416 -----RDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMY 470
Query: 243 VKCGDLVRARLVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+CG A +F K D ++WN +IS Y G + L+ M + P+ TL
Sbjct: 471 GRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTL 530
Query: 302 SSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+VISA + LV E+ G ++H YV +MG+ DVS+ LI MY G ++F M
Sbjct: 531 ITVISACANLVALER-GEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSML 589
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
DVV+W MIS Y +A+E + ME P+ +T ++LSA G L+ G K
Sbjct: 590 QHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRK 649
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII------- 472
+ + L + ++D+ K + +A ++ +P + + W +++
Sbjct: 650 VFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHD 709
Query: 473 ---LGLRLNNRSFEA 484
+GLR+ ++F +
Sbjct: 710 NFEMGLRIAKKAFAS 724
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 178/394 (45%), Gaps = 53/394 (13%)
Query: 92 CVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
CV D+LV+ + C G H K + + N + M+ + G HA
Sbjct: 423 CV-ADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACK 481
Query: 152 VFG-KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+FG D+ +WN LI YA G + A+SLY +M + G+ P+ T V+ C +
Sbjct: 482 IFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQML-IEGLTPNSTTLITVISACANL 540
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
L+RG+++H +V G++ DV + ALI MY KCG L AR +FD M + D ++WN MI
Sbjct: 541 VALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMI 600
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
SGY +GE + L LF M + P+ +T +++SA
Sbjct: 601 SGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSA----------------------- 637
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+C+ G EEG KVF+RM + +C + D ++ +
Sbjct: 638 ----LCHS--------GLLEEGRKVFTRMGKYSLEPNLKHYAC-----MVDLLGKSGHLQ 680
Query: 391 EAEGSM------PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS---YIIIANTLI 441
EAE + PD ++LSAC N ++G+++ + A + + YI+I+N+
Sbjct: 681 EAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSY- 739
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
K I+K E + + + W+++ G+
Sbjct: 740 GGAKKWDEIEKLRETMKNLGVQKGVGWSAVDYGV 773
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 10/284 (3%)
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VH + G + L+ Y S G FS D W ++I + +
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI----SYII 435
A+ ++ M A G+ P T SA A LG L +G +H +R GL+ +
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-- 493
+A++L+ MY++C + A++VF ++P+++V++WT++I G N S E L + +M+
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 494 ---NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+++PNS T+ S L AC + L G+ +H + +++G+ + +AL MY +C
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271
Query: 551 KPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A F E+DV +W L+ Y RG A E F++M++S
Sbjct: 272 EDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMES 315
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+++H LA+ +GL +A L+ YS A F P + W S+I
Sbjct: 30 LRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCA 89
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DG-- 534
+ AL R+M+ + +P+ T SA A +GAL G +HA+ +R G+ DG
Sbjct: 90 SDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDS 149
Query: 535 -FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ ++L+ MY RCG ++ A F ERDV AW +++G G+ + +M+
Sbjct: 150 VAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVR 209
Query: 593 SKGN 596
G+
Sbjct: 210 LAGD 213
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G A+ D M + + L+ ++ C + G +HS V + V +
Sbjct: 506 GHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSIN 565
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A + M+ K G LG A +F M D+ +WNV+I GY G +AL L+ +M G +
Sbjct: 566 TALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG-GSI 624
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KP+ TF +L L+ G++V + ++ E ++ ++ + K G L A
Sbjct: 625 KPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAED 684
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
+ MP + D W ++S + + GL I + DP+
Sbjct: 685 MVLAMPIEPDGGIWGTLLSACKLHDNFEMGLR--IAKKAFASDPE 727
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 262/561 (46%), Gaps = 74/561 (13%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
+++L++ C R + ++ H +++ + H + + L+ + +L A +
Sbjct: 38 IIDLLKSCSNIREFSP-IHAH-LITANLIH-DPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+ + WN L+ K G E L Y M GV D+ TF ++ C D+K G
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMV-TQGVLLDISTFHFLIHACCKNFDVKLGS 153
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EVH +++ G+ + + N L+ +Y KCG L +F+ M RD ISWN MIS Y G
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
Y + L LF M V PD +T+ S++S + D ++G+ +H Y++ S+ N
Sbjct: 214 MYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLN 273
Query: 338 PLIKMYLSFGNREEGEKVFSRMESK--DVVSWTTMISCYEGSVLPDKA------------ 383
L+ MY G +E + SR + DVV WTT++S Y S DKA
Sbjct: 274 CLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSL 333
Query: 384 -------------------VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+E +Q M E +PDE+ + +VLSAC L + DLG +H
Sbjct: 334 VSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAF 393
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL--------- 475
+ G++ + N L+D+Y+KC +D+AL F Q+P K+ SW S++ G
Sbjct: 394 IVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKA 453
Query: 476 -------------------------RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACA 510
L N SFE IF + N+KP+ TL+S+LS+CA
Sbjct: 454 RDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFE--IFCKMQSSNVKPDKTTLISLLSSCA 511
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
++GAL G ++ + + + D L AL+DMY +CG ++ A+ F E++V W
Sbjct: 512 KVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTA 571
Query: 570 LLTGYAERGQGALAEEFFRKM 590
++ YA GQ A + + +M
Sbjct: 572 MMAAYAMEGQALEAIDLYLEM 592
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 258/533 (48%), Gaps = 77/533 (14%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N + ++ K G L +F KM RD+ SWN +I Y G + EAL L+ M V
Sbjct: 170 LNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEML-VS 228
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG----- 246
GV PD T ++ TC + DL+ GK +H++++ ++N L+ MY KCG
Sbjct: 229 GVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEA 288
Query: 247 ------------DLV----------------RARLVFDGMPKRDRISWNAMISGYFENGE 278
D+V +AR +FD M +R +SW M+SGY + G
Sbjct: 289 HGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGY 348
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y + L LF MR V PD + L +V+SA + D LGR VH +++ G D + N
Sbjct: 349 YCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNA 408
Query: 339 LIKMYLSFGNREEGEKV-------------------------------FSRMESKDVVSW 367
L+ +Y G +E + F+++ KD+VSW
Sbjct: 409 LLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSW 468
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
TM++ Y L +++ E + M++ PD+ T+ S+LS+CA +G L+ GI ++ +
Sbjct: 469 NTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEK 528
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ ++ LIDMY KC C++ A E+F QI +KNV WT+++ + ++ EA+
Sbjct: 529 NEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDL 588
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
+ +M +KP+ VT +++L+AC+ G + G + + + LR +F +P ++
Sbjct: 589 YLEMEERGVKPDHVTFIALLAACSHGGLVDEGYK-YFNKLR---SFYNIIPTIHHYGCMV 644
Query: 542 DMYVRCGRMKPA--WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
D+ R G ++ + + E DVS W+ L+ LAE+ F+++I+
Sbjct: 645 DLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 221/473 (46%), Gaps = 71/473 (15%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L++C + + +H H+I D ++ + ++ + +L A + + +
Sbjct: 41 LLKSCSNIREFS---PIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WN ++ + G + L + M V D T +I A D KLG EVHG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
++K GF + S+ N L+ +Y G +E ++F +M +DV+SW TMISCY + +
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A++ + M G +PDEIT+ S++S CA L +L++G +LH + L + N L+D
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVD 277
Query: 443 MYSKC-----------KC----------------------IDKALEVFHQIPDKNVISWT 469
MYSKC +C IDKA ++F ++ +++++SWT
Sbjct: 278 MYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWT 337
Query: 470 SIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+++ G E+L F++M N+ P+ V LV++LSAC + G+ +HA +
Sbjct: 338 TMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY 397
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPA--------------WNQ-----------------F 557
G+ DGFL NALLD+Y +CG++ A WN F
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFF 457
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
N E+D+ +WN ++ Y + + E F KM S K + L+ L C
Sbjct: 458 NKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N + ++ + MQ N+ D+ L++L+ C + G++++ + K
Sbjct: 469 NTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEK 528
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ LG A + M+ K G + A+ +F ++ ++++F W ++ YA G EA+ L
Sbjct: 529 NEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDL 588
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTC--GGVPD 212
Y M GVKPD TF +L C GG+ D
Sbjct: 589 YLEM-EERGVKPDHVTFIALLAACSHGGLVD 618
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/563 (29%), Positives = 277/563 (49%), Gaps = 17/563 (3%)
Query: 37 RHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDED 96
RHFS + L +SS TK SR+ ELC G L +A++ L+S I
Sbjct: 8 RHFSQ---HASLCLTPSISSSAPTKQ--SRILELCKLGQLTEAIRILNSTHSSEIPATPK 62
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGK 155
+L++ C + G+ H+ V K+ +GN+ LS++ K G + VF
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+D SW ++ GY +AL ++ M G+ + +T ++ C + +++
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGEVRL 181
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ H VI G+E + + + L +Y + V AR VFD MP+ D I W A++S + +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 276 NGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
N Y + L LF M R + PD T +V++A + K G+E+HG +I G +V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V + L+ MY G+ E +VF+ M K+ VSW+ ++ Y + +KA+E ++ ME +
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK- 360
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
D +VL ACA L + LG ++H +R G +I+ + LID+Y K CID A
Sbjct: 361 ---DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
V+ ++ +N+I+W +++ L N R EA+ FF M+ +KP+ ++ ++IL+AC G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 514 ALMCGKEIHA-HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNIL 570
+ G+ A G+ + ++D+ R G + A N E D S W +L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 571 LTGYAERGQGA-LAEEFFRKMID 592
L A + +AE ++M++
Sbjct: 538 LGPCAANADASRVAERIAKRMME 560
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 192/375 (51%), Gaps = 18/375 (4%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF +M + D+ W ++ ++K ++EAL L+ M G+ PD TF VL CG
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ LK+GKE+H +I G ++V V ++L+ MY KCG + AR VF+GM K++ +SW+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
++ GY +NGE+ K + +F M E D +V+ A + +LG+E+HG ++ G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+V V + LI +Y G + +V+S+M +++++W M+S + ++AV +
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-----LIDM 443
M +G PD I+ ++L+AC G +D G L + SY I T +ID+
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK----SYGIKPGTEHYSCMIDL 508
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMMLNLKP----N 498
+ ++A + + +N S ++LG N + K M+ L+P +
Sbjct: 509 LGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMS 568
Query: 499 SVTLVSILSACARIG 513
V L ++ A R G
Sbjct: 569 YVLLSNMYKAIGRHG 583
>gi|302782105|ref|XP_002972826.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
gi|300159427|gb|EFJ26047.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
Length = 624
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 243/481 (50%), Gaps = 12/481 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G H+ +S+ S GNA ++M+ KFG + A VF ++ +RD+ +W +++ YA
Sbjct: 26 QGKLAHACLSEATSGSDRVAGNAAINMYGKFGCVESAKVVFDRVLERDIITWTLMVSAYA 85
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G +A ++ +M V GV P+ TF +L C + VH + G++
Sbjct: 86 QNGHTRQAFQVFGKML-VEGVVPNKVTFLAILNACSSSSE---AAFVHRLLFESGFQFTA 141
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V ++L+ Y KC ++ AR VF M K + ++WNA I + + L F +
Sbjct: 142 KVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAFIRALASSRDASGALQTFRSLLL 201
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD +T I+AS+ + + + G DV++ N LI M+ E
Sbjct: 202 QGLVPDTVTF---INASQGAKTPPEAKYLEACRQESGVQLDVALGNTLINMFGGSSQPCE 258
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACA 410
+VF +K++VSW M+S Y + ++ + ++ M + ++ PD++T ASVLS+CA
Sbjct: 259 ARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCA 318
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
L NL G H A+ GL + +A TLI MYSKC C+++A ++F + P +V++WT
Sbjct: 319 NLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTV 378
Query: 471 IILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+I N R EA+ F +M + P+ V ++L ACA L G+ + A + +G+
Sbjct: 379 MISAYAQNGRPQEAIALFFRM--TVPPDGVAFATVLGACASSENLEAGRVVRAQIVELGL 436
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ + NA+LD+Y +C + F +RD +WN ++ YA G A + FR
Sbjct: 437 DAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRA 496
Query: 590 M 590
M
Sbjct: 497 M 497
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 13/444 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG QA + M + ++ + ++ C E ++H ++ ++ + ++
Sbjct: 87 NGHTRQAFQVFGKMLVEGVVPNKVTFLAILNACS---SSSEAAFVHRLLFESGFQFTAKV 143
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
++ + + K ++ A VF M D+ ++ +WN I A + AL + R +
Sbjct: 144 ESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAFIRALASSRDASGALQTF-RSLLLQ 202
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD TF + G K + G + DV + N LI M+ A
Sbjct: 203 GLVPDTVTF---INASQGAKTPPEAKYLEACRQESGVQLDVALGNTLINMFGGSSQPCEA 259
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASEL 310
R VFD ++ +SWNAM+S Y +NG + + + LF M V PD +T +SV+S+
Sbjct: 260 RRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCAN 319
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + + G+ H ++ G V V LI+MY EE +FSR S DVV+WT M
Sbjct: 320 LENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVM 379
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + P +A+ + M PD + A+VL ACA NL+ G + + GL
Sbjct: 380 ISAYAQNGRPQEAIALFFRMTVP---PDGVAFATVLGACASSENLEAGRVVRAQIVELGL 436
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ +AN ++D+Y KC I + E+F ++ ++ +SW +++ + +L FR
Sbjct: 437 DAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRA 496
Query: 491 MMLN-LKPNSVTLVSILSACARIG 513
M L + P+ V+LVS LS + G
Sbjct: 497 MQLEGVCPSEVSLVSALSTYSHAG 520
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V + + + E YL + ++ L V LGN ++MF A VF +
Sbjct: 209 VTFINASQGAKTPPEAKYLEACRQESGVQLDVALGNTLINMFGGSSQPCEARRVFDATHN 268
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+++ SWN ++ Y++ G F+E ++L+++M VKPD TF VL +C + +L+ GK
Sbjct: 269 KNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKL 328
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + G E V V LI MY KC L AR +F P D ++W MIS Y +NG
Sbjct: 329 AHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGR 388
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ + LF M V PD + ++V+ A + + GR V ++++G + +V N
Sbjct: 389 PQEAIALFFRM---TVPPDGVAFATVLGACASSENLEAGRVVRAQIVELGLDAERAVANA 445
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
++ +Y E ++F RM +D VSW TM++ Y + ++ ++ M+ EG P
Sbjct: 446 VLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPS 505
Query: 399 EITIASVLSACACLGNLDLGIK 420
E+++ S LS + G ++ G +
Sbjct: 506 EVSLVSALSTYSHAGLVEQGCQ 527
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 194/410 (47%), Gaps = 15/410 (3%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ P+ + VL + G L +GK H + +D NA I MY K G + A
Sbjct: 5 GIAPNKFLLVRVLSS--GCSSLAQGKLAHACLSEATSGSDRVAGNAAINMYGKFGCVESA 62
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++VFD + +RD I+W M+S Y +NG + +F M V P+ +T ++++A
Sbjct: 63 KVVFDRVLERDIITWTLMVSAYAQNGHTRQAFQVFGKMLVEGVVPNKVTFLAILNACSSS 122
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
+ VH + + GF V + L+ Y N VFS M K +VV+W
Sbjct: 123 SEAAF---VHRLLFESGFQFTAKVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAF 179
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I S A++T++ + +G +PD +T ++A L +G+
Sbjct: 180 IRALASSRDASGALQTFRSLLLQGLVPDTVTF---INASQGAKTPPEAKYLEACRQESGV 236
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + NTLI+M+ +A VF +KN++SW +++ N E + F++
Sbjct: 237 QLDVALGNTLINMFGGSSQPCEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQ 296
Query: 491 M--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M +KP+ +T S+LS+CA + L GK HA A+ G+ F + L+ MY +C
Sbjct: 297 MASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCH 356
Query: 549 RMKPAWNQFN-SNERDVSAWNILLTGYAERG--QGALAEEFFRKMIDSKG 595
++ A + F+ S DV AW ++++ YA+ G Q A+A FFR + G
Sbjct: 357 CLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIA-LFFRMTVPPDG 405
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 256/519 (49%), Gaps = 45/519 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAG 175
LHS++ H SV ++ + F D ++ VF +++ WN +I G
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F EALSLY + ++PD YTFP V+ C G+ D + K +H V+ G+ +D+ +
Sbjct: 95 LFSEALSLYSETQRI-RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NALI MY + DL +AR VF+ MP RD +SWN++ISGY NG + + L ++ ++ ++
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213
Query: 296 ------PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
PD +T++S++ A +GD + G+ VH Y+I G+ D + N LI MY GN
Sbjct: 214 MVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA----------------- 392
++VFS M+ KD VSW +MI+ Y + +++ ++ M+A
Sbjct: 274 LASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSE 333
Query: 393 --------------EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
EG PD T+ S+L C+ L G ++H + GL S + + N
Sbjct: 334 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 393
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
LI+MYSKC + + +VF + K+V++WT++I + +A+ F +M + P
Sbjct: 394 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 453
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWN 555
+ V V+I+ AC+ G + G + H ++ + + + ++D+ R + A +
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 512
Query: 556 QFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
S + D S W LL+ G +AE ++I+
Sbjct: 513 FILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE 551
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 224/453 (49%), Gaps = 38/453 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L NG +AL Q + + D +++ C ++ +H V
Sbjct: 84 NSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ +F DL A VF +M RD+ SWN LI GY G+++EAL +
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 184 YQR-----MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
Y + M V KPD+ T +L+ CG + DL+ GK VH ++I GYE D N L
Sbjct: 204 YYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 263
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG---------EYMK-------- 281
I MY KCG+L+ ++ VF GM +D +SWN+MI+ Y +NG E MK
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323
Query: 282 --------------GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
GL + MR V PD T+ S++ L+ ++ G+E+HG + K+
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
G DV V N LI+MY G+ +VF M++KDVV+WT +IS KAV +
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAF 443
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSK 446
MEA G +PD + +++ AC+ G ++ G+ H++ + I ++D+ S+
Sbjct: 444 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSR 503
Query: 447 CKCIDKALEVFHQIPDKNVIS-WTSIILGLRLN 478
+DKA + +P K S W +++ R++
Sbjct: 504 SALLDKAEDFILSMPLKPDSSIWGALLSACRMS 536
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 197/431 (45%), Gaps = 40/431 (9%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD-GM 258
F + R + ++H +I G V LI Y D + VF
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P + WN++I NG + + L L+ + + + PD T SVI+A + D ++ +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+H V+ MGF D+ + N LI MY F + ++ KVF M +DVVSW ++IS Y +
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 379 LPDKAVETYQ-----MMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
++A+E Y ME PD +TI S+L AC LG+L+ G +H + +G
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+N LI+MY+KC + + EVF + K+ +SW S+I N + ++L F M
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 493 ---------------------LNLK-----------PNSVTLVSILSACARIGALMCGKE 520
L L+ P+ T++SIL C+ + A GKE
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQ 579
IH ++G+ D + N L++MY +CG ++ ++ F +DV W L++ G+
Sbjct: 376 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 435
Query: 580 GALAEEFFRKM 590
G A F +M
Sbjct: 436 GKKAVRAFGEM 446
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH-Q 459
+I+ L++ A L KLH L + GL +I + LI Y+ + + VF
Sbjct: 18 SISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG 518
P NV W SII L N EAL + + + L+P++ T S+++ACA +
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAER 577
K IH L +G D ++ NAL+DMY R + A F RDV +WN L++GY
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 578 GQGALAEEFFRKMI 591
G A E + + I
Sbjct: 195 GYWNEALEIYYQSI 208
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 256/483 (53%), Gaps = 14/483 (2%)
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+VS LSV + ++++ + D A+ + + + WN +I + +G F
Sbjct: 75 IVSSGFQPLSV--ASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGY 132
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRGKEVHVHVIRFGYEADVDVVNAL 238
AL Y RM + GV D +TFP + + + ++ G+ VH ++ G+ DV N +
Sbjct: 133 ALLQYGRMREL-GVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTM 191
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ +YVKCG + A +FD M RD +SW ++ISGY + +G LF MR + ++P+
Sbjct: 192 LEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMR-MEMEPNS 250
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL-SFGNREEGEKVFS 357
+T+ ++ A GRE+H YVIK GF D SV N +++MY + G+ EE E FS
Sbjct: 251 VTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFS 310
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+E +D++SW +I+ Y + E + M E + E ++ V+SA A NL
Sbjct: 311 EIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIE-SLTLVVSAIANCANLSE 369
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G LH A++TGL +++ L+ +Y+KC ++ + ++F IP +N I+W+S++ G
Sbjct: 370 GGMLHCSAIKTGLHDTVLM-TCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQ 428
Query: 478 NNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF---- 532
N EA+ +++M+ + L+PN + +++ A +GAL GK HA +R ++
Sbjct: 429 NGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEED 488
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
L +LL+MY+RCG + A FN +DV W ++ G+ G A +FF+ M+
Sbjct: 489 SAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSML 548
Query: 592 DSK 594
+S+
Sbjct: 549 ESE 551
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 251/502 (50%), Gaps = 20/502 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVV 121
NS + +G AL M+EL + D ++ W G + G +H V
Sbjct: 118 NSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTF-PIINQAIWSLGCRVEYGETVHCVA 176
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K V GN L ++VK G +G+A +F +M RDL SW +I GY F
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGF 236
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L+ +M ++P+ T +L+ C + G+E+H +VI+ G+ D V N+++ M
Sbjct: 237 KLFNKMRM--EMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRM 294
Query: 242 YVKCGDL-VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFM 299
Y K G F + +RD ISWN +I+ Y G+ + F M REV + +
Sbjct: 295 YTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESL 354
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
TL V+SA + G +H IK G D V + L+ +Y G E ++F +
Sbjct: 355 TL--VVSAIANCANLSEGGMLHCSAIKTGLHDTV-LMTCLLALYAKCGALEISAQLFRDI 411
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
++ ++W++M+S + + +A+E YQ M A G P+ I++++ A LG L LG
Sbjct: 412 PHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGK 471
Query: 420 KLHQLAMRTGLISY-----IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
H +R L S+ + +L++MY +C I AL F+++ K+V++WTS+I G
Sbjct: 472 ATHAFFIRN-LSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEG 530
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ +FEAL FF+ M+ + ++PNSVT +S+LSAC+ G + G E+ H+++ G +
Sbjct: 531 FGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVF-HSMKWGFRIE 589
Query: 534 GFLPN--ALLDMYVRCGRMKPA 553
L + ++D+ R G++K A
Sbjct: 590 PDLNHYTCMVDLLGRSGKLKEA 611
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 8/399 (2%)
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+ + +L +C + LKR +H +I + V + LIT+Y + D A + +
Sbjct: 52 FPYSSLLHSCNNLQALKR---IHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNS 108
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KL 316
+ + + WN++I + ++G + L+ + MRE+ V D T + A +G +
Sbjct: 109 FEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEY 168
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G VH +KMGF DV N ++++Y+ G+ K+F M +D+VSWT++IS Y
Sbjct: 169 GETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIY 228
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ + + M E P+ +T+ +L AC+ +++ G +LH ++ G + +
Sbjct: 229 GESFSRGFKLFNKMRMEME-PNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSV 287
Query: 437 ANTLIDMYSKCKCIDKALEV-FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
N+++ MY+K + +E F +I ++++ISW +I E F +M +
Sbjct: 288 QNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREV 347
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ +L ++SA A L G +H A++ G+ D L LL +Y +CG ++ +
Sbjct: 348 TSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGL-HDTVLMTCLLALYAKCGALEISAQ 406
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F R+ W+ +++G+ + G A E +++M+ S
Sbjct: 407 LFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLAS 445
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 264/513 (51%), Gaps = 21/513 (4%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKM 156
L L++ C G LH K + H+S + L L+++ K G L + +FG+M
Sbjct: 42 LAALLKSCVAISAIRFGSVLHGYALK-LGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEM 100
Query: 157 CDRDLFSWNVLIGGYAKAGFFD---EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
RD WN+++ G AGF E + L++ M V KP+ T VL C + +
Sbjct: 101 DQRDPVIWNIVLSGL--AGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE- 157
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR-ARLVFDGMPKRDRISWNAMISG 272
GK VH +VI+ G E+ NALI+MY KCG + A F+ + +D +SWNA+I+G
Sbjct: 158 DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 217
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI---SASELVGDEKLGREVHGYVI-KMG 328
+ EN + LF M + + P++ T++S++ ++ E + G+EVH +V+ +M
Sbjct: 218 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRME 277
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY- 387
+DVSV N L+ YL G E+ E +F M+S+D+VSW +I+ Y + KA+E +
Sbjct: 278 LVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 337
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-TGLISYIIIANTLIDMYSK 446
+ + E PD +T+ SVL ACA + NL + +H +R GL + N L+ Y+K
Sbjct: 338 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 397
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
C AL+ F I K++ISW +I+ + + M+ ++P+S+T+++I
Sbjct: 398 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 457
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLP---NALLDMYVRCGRMKPAWNQFN--SN 560
+ A + + KE H++++R G+ P N +LD Y +CG MK A N F S
Sbjct: 458 IQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSE 517
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+R+V N +++GY A F M ++
Sbjct: 518 KRNVVTCNSMISGYVNSSSHDDAYAIFNTMSET 550
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 275/585 (47%), Gaps = 59/585 (10%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
N E+A K +M + I + + +++ +C E GY G +H V + M +
Sbjct: 221 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 280
Query: 130 -VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V + N+ +S +++ G + A ++F M RDL SWN +I GYA G + +AL L+
Sbjct: 281 DVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFI 340
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGD 247
+ +KPD T VL C V +L+ K +H ++IR G D V NAL++ Y KC
Sbjct: 341 SLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNY 400
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENG-EYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A F + ++D ISWNA++ + E+G E +L M+RE + PD +T+ ++I
Sbjct: 401 TQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-IRPDSITILTIIQ 459
Query: 307 ASELVGDEKLGREVHGYVIKMGF-----------------------------------SD 331
V K +E H Y I+ G
Sbjct: 460 YYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 519
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V CN +I Y++ + ++ +F+ M D+ +W M+ Y + PD+A+ + ++
Sbjct: 520 NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 579
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G PD +TI S+L ACA + ++ + + H +R + + + IDMYSKC +
Sbjct: 580 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVF 638
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F P K+++ +T+++ G ++ EAL F M+ L +KP+ V + ++L AC+
Sbjct: 639 GAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACS 698
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERD 563
G + G +I ++ GF P ++D+ R GR+K A+ E +
Sbjct: 699 HAGLVDEGWKIFNSIEKV----HGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEAN 754
Query: 564 VSAWNILL----TGYAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ W LL T + +A+ F+ D+ GN+ + L+
Sbjct: 755 ANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLY 799
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 210/414 (50%), Gaps = 15/414 (3%)
Query: 178 DEALSLY-QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
DEALSL+ +R+ G KP+ +L++C + ++ G +H + ++ G+ + +
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY--FENGEYMKGLMLFIMMREV-L 293
L+ +Y K G L +F M +RD + WN ++SG F++ E + + LF M V
Sbjct: 79 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHE-AEVMRLFRAMHMVNE 137
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-EEG 352
P+ +T++ V+ + E G+ VH YVIK G N LI MY G +
Sbjct: 138 AKPNSVTIAIVLPVCARL-REDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDA 196
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
F+R+E KDVVSW +I+ + + ++A + + M P+ TIAS+L CA L
Sbjct: 197 YAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASL 256
Query: 413 ---GNLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
G ++H + R L+ + + N+L+ Y + ++KA +F + ++++SW
Sbjct: 257 EENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSW 316
Query: 469 TSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
+II G N +AL F + + +KP+SVTLVS+L ACA + L K IH + +
Sbjct: 317 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYII 376
Query: 527 R-IGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
R G+ D + NALL Y +C + A F + +D+ +WN +L + E G
Sbjct: 377 RHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESG 430
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 278/525 (52%), Gaps = 9/525 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
Q LK+ + +I + + ++++ C + + G+ L+S+V K+ + N+F
Sbjct: 8 HQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSF 67
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV-KP 195
+S + K A VF M +D SWN +I GY + G+F + +++ M+ G V KP
Sbjct: 68 ISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKP 127
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNALITMYVKCGDLVRARLV 254
++ V+ C + D+K G+ +H V+ G A ++ V+ +L+ Y K GD + A V
Sbjct: 128 EL--VASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRV 185
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + ++ +SW A++SG N +Y L F M+ V P+ +TL +++ A +G
Sbjct: 186 FDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCA 245
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYL-SFGNREEGEKVFSRMESKDVVSWTTMISC 373
K G+E+HGY + GF D + LI +Y S + + F R KDVV W+++I
Sbjct: 246 KTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGS 305
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y S +A++ ++ M A+G+ P+ +T+ +V++AC L +L G H ++ GL
Sbjct: 306 YCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFD 365
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I N LI+MYSKC C+ + ++F ++ K+ +SW+++I L+ EAL F +M L
Sbjct: 366 TYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQL 425
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMK 551
++P+++T +++LSAC G + G++I + + G V+ L+D+ + G++
Sbjct: 426 QGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVD 485
Query: 552 PAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
A++ + + + W+ L++ G+ +AE +++I S+
Sbjct: 486 DAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSE 530
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
+S + C + +ALK M+ + L+ ++ C G H + K
Sbjct: 300 SSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVK 359
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA ++M+ K G + + +F +M +D SW+ LI Y G EAL L
Sbjct: 360 CGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCL 419
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+ M + GV+PD TF VL C +K G+++ +V + G V+ L+ +
Sbjct: 420 FHEM-QLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLL 478
Query: 243 VKCGDLVRARLVFDGMPKRDRIS-WNAMISG 272
K G + A + MP + + W++++S
Sbjct: 479 GKSGKVDDAFDILRAMPMKPSTTIWSSLVSA 509
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 267/527 (50%), Gaps = 10/527 (1%)
Query: 75 SLEQALKYLDSMQELNICVDE-DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
+L +A++Y DS EL +L+ L G + L++ + S S L V G
Sbjct: 259 TLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYV--G 316
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A +S F + G L A ++ + +R+ + N LI G K + A ++ V
Sbjct: 317 SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 376
Query: 194 KPDVYT--FPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVR 250
D Y + L++G+EVH HV+R G+ + V N L+ MY KCG + +
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF M RDRISWN +I+ +NG +M + +MR+ + P S +S+
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G G+++H +K G D SV N L+KMY G E ++F+ M + DVVSW ++
Sbjct: 497 LGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 556
Query: 371 ISCYEGSVLP-DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+ S P ++V+ + M G +P+++T + L+A L L+LG ++H + ++ G
Sbjct: 557 MGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHG 616
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFF 488
+ + N L+ Y+K +D +F ++ ++ ISW S+I G N EA+
Sbjct: 617 VTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCV 676
Query: 489 RKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
MM + + + T +L+ACA + AL G E+HA LR + D + +AL+DMY +C
Sbjct: 677 CLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 736
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
GR+ A F+S ++++ +WN +++GYA G G A E F +M +S
Sbjct: 737 GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQES 783
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 253/500 (50%), Gaps = 23/500 (4%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
E L+L VV + ++H + L N ++ + K L A VF M R+ SW LI G+
Sbjct: 85 ESLHL-EVVKRGLTH-DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHV 142
Query: 173 KAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH--VIRFGYE 229
+G ++A L++ M G G +P +TF VLR C + G V VH V + +
Sbjct: 143 LSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFT 202
Query: 230 ADVDVVNALITMYVKC--GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ V NALI+MY C G + A+ VFD P RD I+WNA++S Y + G+ + LF
Sbjct: 203 SNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR 262
Query: 288 MMR----EVLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
M+ + + P T S+I+A+ L L ++ V+K G S D+ V + L+
Sbjct: 263 AMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 322
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
+ G +E + ++ ++ ++ V+ +I+ + A E + M + + + T
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDTY 381
Query: 403 ASVLSACACLGNLDLGIK----LHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVF 457
+LSA A + G++ +H +R G I I ++N L++MY+KC IDKA VF
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ ++ ISW +II L N A++ + M N + P++ +S LS+CA +G L
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G+++H A++ G+ D + NAL+ MY CGRM W FNS + DV +WN ++ G
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM-GVM 560
Query: 576 ERGQGALAE--EFFRKMIDS 593
Q + E + F M+ S
Sbjct: 561 ASSQAPITESVQVFSNMMKS 580
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 240/464 (51%), Gaps = 21/464 (4%)
Query: 68 NELCLNGSLEQALK--YLDSMQELNICVDEDALVN----------LVRLCEWKRGYDEGL 115
N + LNG + +K + ++ E+ + + A VN + ++G +G
Sbjct: 343 NAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGR 402
Query: 116 YLHSVVSKTMSHL--SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+H+ V + H+ + + N ++M+ K G + A VF M RD SWN +I +
Sbjct: 403 EVHAHVLRA-GHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQ 461
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ + A+ Y M + P + L +C G+ L G+++H +++G D
Sbjct: 462 NGYCEAAMMNYCLMRQ-NSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTS 520
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE--YMKGLMLFIMMRE 291
V NAL+ MY +CG + +F+ M D +SWN+ I G + + + + +F M +
Sbjct: 521 VSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMK 579
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ +T + ++A + +LG+++H ++K G ++D +V N L+ Y G+ +
Sbjct: 580 SGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDS 639
Query: 352 GEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E++FSRM + D +SW +MIS Y + +A++ +M M D T + VL+ACA
Sbjct: 640 CERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACA 699
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ L+ G+++H +R+ L S +++ + L+DMYSKC ID A +VFH + KN SW S
Sbjct: 700 SVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNS 759
Query: 471 IILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
+I G + +AL F +M + + P+ VT VS+LSAC+ G
Sbjct: 760 MISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAG 803
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 248/483 (51%), Gaps = 26/483 (5%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMF--VKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H +VSKT + + NA +SM+ G A VF RDL +WN L+ YAK
Sbjct: 192 VHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKR 251
Query: 175 GFFDEALSLYQRMFWVGG---VKPDVYTFPCV-----LRTCG-GVPDLKRGKEVHVHVIR 225
G +L++ M + ++P +TF + L +C G+ D ++ V V++
Sbjct: 252 GDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLD-----QLFVRVLK 306
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
G +D+ V +AL++ + + G L A+ ++ G+ +R+ ++ N +I+G + +
Sbjct: 307 SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEI 366
Query: 286 FIMMRE---VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIK 341
F+ R+ V VD + LS++ S + GREVH +V++ G ++V N L+
Sbjct: 367 FMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVN 426
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G ++ +VF ME++D +SW T+I+ + + + A+ Y +M P
Sbjct: 427 MYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFA 486
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
S LS+CA LG L G +LH A++ GL ++N L+ MY +C + + E+F+ +
Sbjct: 487 AISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS 546
Query: 462 DKNVISWTSIILGLRLNNRS--FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+V+SW S I+G+ ++++ E++ F MM + L PN VT V+ L+A + L G
Sbjct: 547 AHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELG 605
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAE 576
K+IH+ L+ GV D + NAL+ Y + G + F+ S RD +WN +++GY
Sbjct: 606 KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIY 665
Query: 577 RGQ 579
G
Sbjct: 666 NGH 668
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 6/441 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L NG E A+ M++ +I A ++ + C G LH K
Sbjct: 453 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 512
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALS 182
+L + NA + M+ + G + W +F M D+ SWN ++G A + E++
Sbjct: 513 WGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQ 572
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M G+ P+ TF L + L+ GK++H +++ G D V NAL++ Y
Sbjct: 573 VFSNMM-KSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCY 631
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
K GD+ +F M +RD ISWN+MISGY NG + + +M D T
Sbjct: 632 AKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTF 691
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S V++A V + G E+H + ++ DV V + L+ MY G + KVF M
Sbjct: 692 SIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQ 751
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K+ SW +MIS Y L KA+E ++ M+ G PD +T SVLSAC+ G ++ G+
Sbjct: 752 KNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDY 811
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
+L G++ I + +ID+ + +DK E ++P K N + W ++++ + +
Sbjct: 812 FELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKH 871
Query: 481 --SFEALIFFRKMMLNLKPNS 499
+ +M+L L+P +
Sbjct: 872 RAKIDLGTEASRMLLELEPQN 892
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 248/497 (49%), Gaps = 21/497 (4%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+ V+L+ C ++ +G +H+ + +T S SV L N+ ++++ K G + A VF +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 157 CDRDLFSWNVLIGGYAKAGF--FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
++D+ SWN LI GY++ G + + L+QRM P+ +TF V P+
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRM-RAENTLPNGHTFSGVFTAASSSPETF 130
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G + H I+ DV V ++LI MY K G ++ AR VFD +P+R+ +SW +ISGY
Sbjct: 131 GGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ LF++MR D +SV+SA + G+++H +K G S
Sbjct: 191 MERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V N L+ MY G ++ K F KD ++W+ MI+ Y + +A+ + M G
Sbjct: 251 VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ P E T V++AC+ +G L+ G ++H +++ G I + +KC + A
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDAR 370
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGA 514
+ F + + +++ WTS R M + P+ +T+ S+L AC+ + A
Sbjct: 371 KGFDYLKEPDIVLWTSC-----------------RMQMERIMPHELTMASVLRACSSLAA 413
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L GK+IHA ++ G + + + +AL MY +CG ++ F RD+ WN +++G
Sbjct: 414 LEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISG 473
Query: 574 YAERGQGALAEEFFRKM 590
++ G+G A E F ++
Sbjct: 474 LSQNGEGLKALELFEEL 490
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 197/380 (51%), Gaps = 4/380 (1%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P +F +L C DL++GK +H ++R G + V + N+L+ +Y KCG +V+A+
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 253 LVFDGMPKRDRISWNAMISGYFENGE--YMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
LVF+ + +D +SWN +I+GY + G Y + LF MR P+ T S V +A+
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ G + H IK DV V + LI MY G + KVF + ++ VSW T+
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATI 185
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + +A E + +M E D+ SVLSA + G ++H LA++ GL
Sbjct: 186 ISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGL 245
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+S + N L+ MY KC C+D A + F DK+ I+W+++I G S EAL F
Sbjct: 246 LSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYN 305
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M LN KP+ T V +++AC+ IGAL GK+IH ++L+ G + + +CG
Sbjct: 306 MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGS 365
Query: 550 MKPAWNQFNS-NERDVSAWN 568
+ A F+ E D+ W
Sbjct: 366 LVDARKGFDYLKEPDIVLWT 385
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 228/467 (48%), Gaps = 33/467 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL H++ KT + V +G++ ++M+ K G + A VF + +R+ SW +I GYA
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADV 232
EA L+ M G D + + VL VPDL GK++H ++ G +
Sbjct: 192 ERMAFEAWELFLLMRREEGAH-DKFIYTSVLSALT-VPDLVHYGKQIHCLALKNGLLSIA 249
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V NAL+TMY KCG L A F+ +D I+W+AMI+GY + G+ + L LF M
Sbjct: 250 SVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
P T VI+A +G + G+++HGY +K G+ + + G+ +
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDA 369
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ D+V WT SC M+ E MP E+T+ASVL AC+ L
Sbjct: 370 RKGFDYLKEPDIVLWT---SC---------------RMQMERIMPHELTMASVLRACSSL 411
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+ G ++H ++ G + I + L MY+KC ++ VF ++P +++++W ++I
Sbjct: 412 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 471
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
GL N +AL F ++ KP+ VT V++LSAC+ +G + GK R+ +
Sbjct: 472 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVY----FRMMLD 527
Query: 532 FDGFLPNA-----LLDMYVRCGRMKPAWNQFNSNERD--VSAWNILL 571
G +P ++D+ R G++ S D + W ILL
Sbjct: 528 EFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 574
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 24/385 (6%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GNA ++M+ K G L A+ F D+D +W+ +I GYA+AG EAL+L+ M +
Sbjct: 251 VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH-LN 309
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G KP +TF V+ C + L+ GK++H + ++ GYE + + KCG LV A
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDA 369
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R FD + + D + W + M+ + P +T++SV+ A +
Sbjct: 370 RKGFDYLKEPDIVLWTS------------------CRMQMERIMPHELTMASVLRACSSL 411
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++H IK GFS +V + + L MY G+ E+G VF RM S+D+++W MI
Sbjct: 412 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 471
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGL 430
S + KA+E ++ + + PD +T +VLSAC+ +G ++ G + + G+
Sbjct: 472 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGI 531
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I + ++D+ S+ + + E + + I+LG N R++E + +
Sbjct: 532 IPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGE 591
Query: 491 MMLNLKPNS----VTLVSILSACAR 511
++ L + L SI +A R
Sbjct: 592 KLMELGSQESSAYILLSSIYTALGR 616
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P + +L C +L G +H +RTG S + + N+L+++Y+KC I KA V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 457 FHQIPDKNVISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILSACARIG 513
F I +K+V+SW +I G SF +F R N PN T + +A +
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
G + HA A++ +D F+ ++L++MY + G M A F++ ER+ +W +++
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 573 GYAERGQGALAEEFFRKMIDSKGNWRKLM 601
GYA A E F M +G K +
Sbjct: 188 GYAMERMAFEAWELFLLMRREEGAHDKFI 216
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 242/468 (51%), Gaps = 15/468 (3%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK-- 194
+ M+ + G L A VF +M D N+LI ++AG +++ L++ M G +
Sbjct: 1 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR---A 251
P T VL C + L+ G+ +H +VI+ G E D NAL++MY KCG + A
Sbjct: 61 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
L F + +D +SWN++I+GY ENG + + L LF M P++ TL++V+ LV
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180
Query: 312 G-DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+E+HG+V++ G D+SV N L+ Y E +F + D+V+W T+
Sbjct: 181 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-TG 429
I+ Y + P +A++ +Q + G PD +++ S+L+ACA +GNL +GI++H R
Sbjct: 241 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPE 300
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L+ + N L+ YS+C D A F I +K+ +SW +I+ + E FFR
Sbjct: 301 LLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQ--FFR 358
Query: 490 ---KMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+M ++ +SVT+++I+ G M +E H ++LR+G D + NA+LD Y
Sbjct: 359 LLGEMWHDVTQWDSVTILNIIRMSTFCGIKMV-QESHGYSLRVGYTGDSSVANAILDAYA 417
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+CG + A F S R++ N +++ Y + AE F M +
Sbjct: 418 KCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAE 465
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 251/545 (46%), Gaps = 44/545 (8%)
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD---LGHAWYVFGKMCDRD 160
+C R G +H V KT GNA +SM+ K G + A F +C +D
Sbjct: 72 VCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKD 131
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR-GKEV 219
+ SWN +I GY++ G F+EAL+L+ +M + P+ T VL C V + GKE+
Sbjct: 132 VVSWNSIIAGYSENGLFEEALALFGQMISEECL-PNYSTLANVLPFCSLVEYGRHYGKEI 190
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V+R G E D+ V NAL+ Y K ++ +F D ++WN +I+GY N
Sbjct: 191 HGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYP 250
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNP 338
+ L LF + + PD ++L S+++A VG+ ++G VHGY+ + + S+ N
Sbjct: 251 SRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNA 310
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMP 397
L+ Y + + F +++KD VSW ++S C ++ M + +
Sbjct: 311 LVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQW 370
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC---------- 447
D +TI +++ G + + + H ++R G +AN ++D Y+KC
Sbjct: 371 DSVTILNIIRMSTFCG-IKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLF 429
Query: 448 ---------------------KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
C++ A F+ + +K++ +W + N+ +A
Sbjct: 430 RSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFC 489
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F ++ L P+++++ +ILSAC + ++ K+ H + LR + D L ALLD Y
Sbjct: 490 LFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE-DIHLEGALLDAYS 548
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMG 602
+CG + A+N F S +D+ + ++ YA G A E F KM +D K + L
Sbjct: 549 KCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTA 608
Query: 603 LFRKC 607
L C
Sbjct: 609 LLSAC 613
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 269/579 (46%), Gaps = 54/579 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
NG E+AL M + L N++ C E+ R Y G +H V + +
Sbjct: 145 NGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHY--GKEIHGFVVRHGLEMD 202
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA ++ + K ++ +F D+ +WN +I GY + AL L+Q + +
Sbjct: 203 ISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLF 262
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDL 248
G+ PD + +L C V +L+ G VH ++ R + ++NAL++ Y +C
Sbjct: 263 -AGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 321
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP---DFMTLSSVI 305
A F + +D +SWNA++S + +++ F ++ E+ D D +T+ ++I
Sbjct: 322 DAAFRSFITIQNKDSVSWNAILSACANSEHHIE--QFFRLLGEMWHDVTQWDSVTILNII 379
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S G K+ +E HGY +++G++ D SV N ++ Y G + E +F + +++V
Sbjct: 380 RMSTFCGI-KMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIV 438
Query: 366 SWTTMISCY-------------------------------EGSVLPDKAVETYQMMEAEG 394
+ TMISCY + L D+A + +++EG
Sbjct: 439 TGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEG 498
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD I+I ++LSAC L ++ L + H +R L I + L+D YSKC I A
Sbjct: 499 LNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAY 557
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F K+++ +T++I ++ + +A+ F KM+ L++KP+ V L ++LSAC+ G
Sbjct: 558 NLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAG 617
Query: 514 ALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWN---QFNSNERDVSAWNI 569
+ G +I I GV ++D+ R GR++ A++ + + +AW
Sbjct: 618 LVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGS 677
Query: 570 LLTGYAERGQ---GAL-AEEFFRKMIDSKGNWRKLMGLF 604
LL G+ G L A+ F + GN+ + +F
Sbjct: 678 LLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIF 716
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN----LK 496
+DMY + + A VF ++ + + +I + FR M+ +
Sbjct: 1 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG---RMKPA 553
P +VT+ +L CA++ L G+ IH + ++ G+ FD NAL+ MY +CG M A
Sbjct: 61 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
F++ +DV +WN ++ GY+E G A F +MI + N+ L + C
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC 177
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 254/500 (50%), Gaps = 42/500 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++++V+ GDLG A +F +M +R+L +W LI GY + G DEA + ++ M G
Sbjct: 136 LSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAG 195
Query: 192 GVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ P+ Y F LR C G K G ++H + + Y +DV V N LI+MY C D
Sbjct: 196 FI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 254
Query: 250 R-ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFDG+ R+ ISWN++IS Y G+ + LF M++ + F + S
Sbjct: 255 NDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFS 314
Query: 309 ELVGDEKLGREVHGYVIKMGFSDD-VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
L + GREVH +VI+ G +D+ V++ N L+ MY G + VF M KD VSW
Sbjct: 315 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 374
Query: 368 TTMISCYEGSVLPDKAVETYQMM----------------EAEGSMPD------------- 398
++IS + + + A E + +M ++E S+
Sbjct: 375 NSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGW 434
Query: 399 ---EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
+T ++LSA + L ++ ++H L ++ L I N L+ Y KC +++ +
Sbjct: 435 GLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEK 494
Query: 456 VFHQIPD-KNVISWTSIILGLRLNNRSFEA--LIFFRKMMLNLKPNSVTLVSILSACARI 512
+F ++ + ++ +SW S+I G N +A L++F M + +S T +ILSACA +
Sbjct: 495 IFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF-MMQKGQRLDSFTFATILSACASV 553
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
L G E+HA +R + D + +AL+DMY +CGR+ A F R+V +WN ++
Sbjct: 554 ATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMI 613
Query: 572 TGYAERGQGALAEEFFRKMI 591
+GYA G G A + F +M+
Sbjct: 614 SGYARHGHGEKALKLFTRMM 633
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 257/532 (48%), Gaps = 52/532 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK--RGYDEGLYLHSVVSKTMSHLSV 130
NG ++A M + A + +R C+ G G+ +H ++SKT V
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237
Query: 131 RLGNAFLSMFVKFGDLGH-AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N +SM+ D + A VF + R+ SWN +I Y++ G A L+ M
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 190 VG---GVKP-DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVK 244
G KP D ++ VL ++G+EVH HVIR G + V + N L+ MY K
Sbjct: 298 EGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 352
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE-----------VL 293
G + A VF+ M ++D +SWN++ISG +N +F +M E L
Sbjct: 353 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGAL 412
Query: 294 VDPDF---------------------MTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
D + +T +++SA + ++ ++H V+K SDD
Sbjct: 413 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 472
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
++ N L+ Y G E EK+F+RM E++D VSW +MIS Y + L KA++ M
Sbjct: 473 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 532
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G D T A++LSACA + L+ G+++H +R L S +++ + L+DMYSKC ID
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 592
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACA 510
A F +P +NV SW S+I G + +AL F +MML+ + P+ VT V +LSAC+
Sbjct: 593 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 652
Query: 511 RIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+G + G E + R+ + F + ++D+ R G++ + NS
Sbjct: 653 HVGFVEEGFEHFKSMSEVYRLSPRVEHF--SCMVDLLGRAGKLDEVGDFINS 702
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 194/420 (46%), Gaps = 49/420 (11%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF ++ G + +E+H+ I++G+ ++ + N LI +YV+ GDL A+ +FD M
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KL 316
R+ ++W +ISGY +NG+ + F M P+ S + A + G KL
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLS-FGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G ++HG + K + DV VCN LI MY S + + VF + ++ +SW ++IS Y
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280
Query: 376 GSVLPDKAVETYQMMEAEG-----SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
A + + M+ EG D + SVL G ++H +RTGL
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGL 335
Query: 431 -ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS-------- 481
+ + I N L++MY+K I A VF + +K+ +SW S+I GL N S
Sbjct: 336 NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFS 395
Query: 482 ------------------------FEALIFFRKMML-NLKPNSVTLVSILSACARIGALM 516
+A+ +F +MM + VT ++ILSA + +
Sbjct: 396 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHE 455
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGY 574
+IHA L+ ++ D + NALL Y +CG M F S RD +WN +++GY
Sbjct: 456 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 515
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 17/298 (5%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
RE+H IK GF ++ + N LI +Y+ G+ +K+F M ++++V+W +IS Y
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG--NLDLGIKLHQLAMRTGLISYI 434
+ PD+A ++ M G +P+ S L AC G LG+++H L +T S +
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237
Query: 435 IIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++ N LI MY C + A VF I +N ISW SII + A F M
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 493 ----LNLKPN-SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVR 546
+ KPN + + S+L R G+E+HAH +R G+ + + N L++MY +
Sbjct: 298 EGLGFSFKPNDAFSEFSVLEEGRRK-----GREVHAHVIRTGLNDNKVAIGNGLVNMYAK 352
Query: 547 CGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID-SKGNWRKLMG 602
G + A + F E+D +WN L++G + A E F M + + +W ++G
Sbjct: 353 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIG 410
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N L +A+ + M + +D ++ C + G+ +H+ +
Sbjct: 509 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIR 568
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G+A + M+ K G + +A F M R+++SWN +I GYA+ G ++AL L
Sbjct: 569 ACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 628
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ RM + G PD TF VL C V ++ G E
Sbjct: 629 FTRMM-LDGQPPDHVTFVGVLSACSHVGFVEEGFE 662
>gi|255570240|ref|XP_002526080.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534577|gb|EEF36274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 221/422 (52%), Gaps = 31/422 (7%)
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+FD AL +Y M G PD YT+P V++ C + ++ GK +H ++ EA
Sbjct: 60 YFD-ALKVYSEMLRSGYCFPDNYTYPVVIKACSELGLIELGKMIHGQTVK---EA----- 110
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
A +FD M +R ISWN MI+GYF+NG K LM+F M ++ V+
Sbjct: 111 ---------------AERIFDVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVE 155
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
D ++ SV+ A + + ++GR VH V + ++ N LI MY G+ E V
Sbjct: 156 IDCASVVSVLPACGHLKELEMGRRVHATVEDKDLGNKIAARNALIDMYAKCGSMAEARLV 215
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F M+ +DV+SWT+MI+ Y + A+ ++ M+ E +P +TIASVLSAC NL
Sbjct: 216 FDGMDERDVISWTSMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVLSACI---NL 272
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
G H MR L S II+ +LIDMY+KC +D + V + + W +++ G
Sbjct: 273 KDGRCFHGWTMRQNLDSEIIVETSLIDMYAKCNRVDLSYGVLRRTSGERTAPWNAMLSGC 332
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N+ + EA+ F++M+L ++P+ T S+L A A + L+ K IH + + G
Sbjct: 333 IHNDLATEAITLFKQMLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSGL 392
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ L+D+Y +CG ++ A FN+ RD+ AW+++++GY G G A FR+M+
Sbjct: 393 EVATCLIDIYSKCGSLESAHRIFNAIPIGVRDIFAWSVIISGYGMHGHGETAVSLFRQMV 452
Query: 592 DS 593
S
Sbjct: 453 QS 454
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 208/402 (51%), Gaps = 12/402 (2%)
Query: 116 YLHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
Y + VV K S L + LG VK A +F M +R + SWN++I GY K
Sbjct: 81 YTYPVVIKACSELGLIELGKMIHGQTVKEA----AERIFDVMKERSVISWNIMINGYFKN 136
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G ++AL ++ +M + GV+ D + VL CG + +L+ G+ VH V +
Sbjct: 137 GCAEKALMVFNQMVDL-GVEIDCASVVSVLPACGHLKELEMGRRVHATVEDKDLGNKIAA 195
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
NALI MY KCG + ARLVFDGM +RD ISW +MI+GY NG+ L LF M+ +
Sbjct: 196 RNALIDMYAKCGSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTLFRTMQMERI 255
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P +T++SV+SA + D GR HG+ ++ ++ V LI MY +
Sbjct: 256 IPSSVTIASVLSACINLKD---GRCFHGWTMRQNLDSEIIVETSLIDMYAKCNRVDLSYG 312
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
V R + W M+S + L +A+ ++ M + PD T S+L A A L +
Sbjct: 313 VLRRTSGERTAPWNAMLSGCIHNDLATEAITLFKQMLLKKVEPDGATFNSLLPAYAILAD 372
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--KNVISWTSII 472
L +H +TG +S + +A LID+YSKC ++ A +F+ IP +++ +W+ II
Sbjct: 373 LLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGSLESAHRIFNAIPIGVRDIFAWSVII 432
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
G ++ A+ FR+M+ + ++PN VT SIL AC+ G
Sbjct: 433 SGYGMHGHGETAVSLFRQMVQSGVRPNEVTFTSILHACSHAG 474
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +N NG E+AL + M +L + +D ++V+++ C + + G +H+ V
Sbjct: 127 NIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPACGHLKELEMGRRVHATVED 186
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ NA + M+ K G + A VF M +RD+ SW +I GY G AL+L
Sbjct: 187 KDLGNKIAARNALIDMYAKCGSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTL 246
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M + + P T VL C +LK G+ H +R ++++ V +LI MY
Sbjct: 247 FRTM-QMERIIPSSVTIASVLSAC---INLKDGRCFHGWTMRQNLDSEIIVETSLIDMYA 302
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + + V WNAM+SG N + + LF M V+PD T +S
Sbjct: 303 KCNRVDLSYGVLRRTSGERTAPWNAMLSGCIHNDLATEAITLFKQMLLKKVEPDGATFNS 362
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--S 361
++ A ++ D + +H Y+ K GF + V LI +Y G+ E ++F+ +
Sbjct: 363 LLPAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSKCGSLESAHRIFNAIPIGV 422
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+D+ +W+ +IS Y + AV ++ M G P+E+T S+L AC+ G +D
Sbjct: 423 RDIFAWSVIISGYGMHGHGETAVSLFRQMVQSGVRPNEVTFTSILHACSHAGLVD 477
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 245/470 (52%), Gaps = 15/470 (3%)
Query: 133 GNAFLSMFVKFGDLGH---AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
GN+ + + LGH A VF K + +WN +I Y++ G EALSLY RM
Sbjct: 39 GNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMA- 97
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV+PD T+ VL+ C DL+ G+E + GY DV V A++ +Y KCG +
Sbjct: 98 SEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMD 157
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VFD M +RD + W MI+G +NG+ + + ++ M + V+ D + + +I A
Sbjct: 158 EAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACT 217
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G K+G +HGY+I+ DV V L+ MY G+ E VF RM K+V+SW+
Sbjct: 218 TLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSA 277
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS + + A++ M++ G PD +++ SVL AC+ +G L LG +H +R
Sbjct: 278 LISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR- 336
Query: 430 LISYIIIANT-LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ + +++T +IDMYSKC + A VF QI ++ ISW +II ++ EAL F
Sbjct: 337 -LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLF 395
Query: 489 RKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMY 544
+M N+KP+ T S+LSA + G + G+ I + +I + + ++D+
Sbjct: 396 LQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHY--ACMVDLL 453
Query: 545 VRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR++ A S E ++ W LL+G G+ + E +K+++
Sbjct: 454 SRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 13/384 (3%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G A L+++ K G + A VF KM RDL W +I G A+ G EA+ +Y++M
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMH- 198
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V+ D +++ C + K G +H ++IR DV V +L+ MY K G L
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLE 258
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF M ++ ISW+A+ISG+ +NG L L + M+ PD ++L SV+ A
Sbjct: 259 LASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACS 318
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
VG KLG+ VHGY+++ D VS +I MY G+ VF ++ +D +SW
Sbjct: 319 QVGFLKLGKSVHGYIVRRLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNA 377
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-----IKLHQL 424
+I+ Y ++A+ + M PD T AS+LSA + G ++ G I +++
Sbjct: 378 IIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEY 437
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ-IPDKNVISWTSIILGLRLNNRSFE 483
++ Y ++D+ S+ +++A E+ I + + W +++ G LN+ F
Sbjct: 438 KIQPSEKHYA----CMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGC-LNHGKFL 492
Query: 484 ALIFFRKMMLNLKPNSVTLVSILS 507
K +L L P+ + S++S
Sbjct: 493 IGEMAAKKVLELNPDDPGIYSLVS 516
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 150/307 (48%), Gaps = 8/307 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG +A+ M + + D ++ L++ C GL +H + + +
Sbjct: 181 LAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMD 240
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + + + M+ K G L A VF +M +++ SW+ LI G+A+ GF AL L M
Sbjct: 241 VIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQS 300
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G KPD + VL C V LK GK VH +++R D A+I MY KCG L
Sbjct: 301 F-GYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLS 358
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR VFD + RD ISWNA+I+ Y +G + L LF+ MRE V PD T +S++SA
Sbjct: 359 FARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFS 418
Query: 310 LVGDEKLGREVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
G + GR ++ K+ S+ C ++ + G EE +++ M ++ ++
Sbjct: 419 HSGLVEKGRYWFSIMVNEYKIQPSEKHYAC--MVDLLSRAGRVEEAQELIESMITEPGIA 476
Query: 367 -WTTMIS 372
W ++S
Sbjct: 477 IWVALLS 483
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
DE ++H +I G + LI+ Y G+ E +VF + V +W MI
Sbjct: 19 DEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMII 78
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +A+ Y M +EG PD T VL AC +L G + + A+ G
Sbjct: 79 AYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGD 138
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + ++++Y+KC +D+A+ VF ++ ++++ WT++I GL N ++ EA+ +R+M
Sbjct: 139 DVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMH 198
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
++ + V ++ ++ AC +G G IH + +R + D + +L+DMY + G ++
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLE 258
Query: 552 PAWNQFNSN-ERDVSAWNILLTGYAERG 578
A F ++V +W+ L++G+A+ G
Sbjct: 259 LASCVFRRMLYKNVISWSALISGFAQNG 286
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 283/602 (47%), Gaps = 76/602 (12%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
R++ LC NG + +AL + M NI + + +++ C ++R G +H+ + K
Sbjct: 17 RVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKG 76
Query: 126 SHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + K L A +F K+ R++FSW +IG + G + AL
Sbjct: 77 DFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG 136
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD + P V + CG + + G+ VH +V + G V V ++L MY
Sbjct: 137 FVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 195
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L AR VFD +P R+ ++WNA++ GY +NG Y + + L MR+ ++P +T+S+
Sbjct: 196 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVST 255
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SAS +G + G++ H I G D + ++ Y G E E +F M KD
Sbjct: 256 CLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKD 315
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV+W +IS Y L ++A+ Q+M E D +T+++++SA NL LG ++
Sbjct: 316 VVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 375
Query: 424 LAMRTGLISYIIIA-------------------------------NTLIDMYSKCKCIDK 452
+R GL S I++A NTL+ Y+ +
Sbjct: 376 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 435
Query: 453 ALEVFHQI------PD---------------------------------KNVISWTSIIL 473
AL +F+++ P+ N+ISWT+++
Sbjct: 436 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 495
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVA 531
GL N S EA++F RKM + L+PN+ T+ LSAC + +L G+ IH + +R +
Sbjct: 496 GLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYS 555
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + +L+DMY +CG + A F S ++ +N +++ YA G+ A +R +
Sbjct: 556 FSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 615
Query: 591 ID 592
D
Sbjct: 616 ED 617
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 211/443 (47%), Gaps = 42/443 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ L M++ I + + G +EG H++ L L
Sbjct: 228 NGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 287
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L+ + K G + +A +F M ++D+ +WN+LI GY + G +EA+ + Q M
Sbjct: 288 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRR-EN 346
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D T ++ +LK GKE+ + IR G E+D+ + + + MY KCG +V A+
Sbjct: 347 LKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK 406
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD ++D I WN ++S Y ++G + L LF M+ V P+ +T
Sbjct: 407 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITW----------- 455
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK----DVVSWT 368
N +I L G E +++F +M+S +++SWT
Sbjct: 456 ------------------------NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWT 491
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM++ + ++A+ + M+ G P+ TI LSAC L +L G +H +R
Sbjct: 492 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRN 551
Query: 429 GLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
S+ I +L+DMY+KC I+KA VF + + ++I L + EA+
Sbjct: 552 QQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITL 611
Query: 488 FRKMM-LNLKPNSVTLVSILSAC 509
+R + +KP+++T+ S+LSAC
Sbjct: 612 YRSLEDGGVKPDNITITSLLSAC 634
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 11/237 (4%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLF----SWNVLIGGYAKAGFFDEALSLYQRMFW 189
N + ++ G + A +F +M +F SW ++ G + G +EA+ L+ R
Sbjct: 456 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAI-LFLRKMQ 514
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR---FGYEADVDVVNALITMYVKCG 246
G++P+ +T L C + L G+ +H ++IR + + A ++ +L+ MY KCG
Sbjct: 515 ESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIET--SLVDMYAKCG 572
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ +A VF + +NAMIS Y G+ + + L+ + + V PD +T++S++S
Sbjct: 573 DINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 632
Query: 307 ASELVGDEKLGREV-HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
A D EV V K G + ++ + S G ++ ++ M K
Sbjct: 633 ACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 689
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 234/430 (54%), Gaps = 15/430 (3%)
Query: 134 NAFLSMFVKFGDLG--HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N ++ + G LG +A+ VF + D+ +WN ++ + + AL Y M
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD +TFP +L+ C + + K GK +H V+++ +D+ + L+ MY CGDL A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F+ M R+++ W +MISGY +N + L+L+ M E PD +T+++++SA +
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVC----NPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D +G ++H ++ +M D+ +C + L+ MY G+ + +VF ++ KDV +W
Sbjct: 194 KDLGVGMKLHSHIREM----DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAW 249
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ +I Y + +A++ ++ + +M P+E+TI +V+SACA LG+L+ G +H
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
RT + + N+LIDM+SKC ID A +F + K++ISW S++ G L+ EAL
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALA 369
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI--HAHALRIGVAFDGFLPNALLDM 543
FR M +L+P+ +T + +L+AC+ G + GK++ AL GV ++D+
Sbjct: 370 QFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL-YGVRLKSEHYGCMVDL 428
Query: 544 YVRCGRMKPA 553
R G + A
Sbjct: 429 LCRAGLLAEA 438
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 215/381 (56%), Gaps = 8/381 (2%)
Query: 235 VNALITMYVKCGDLV--RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+N LI + G L A VF + D ++WN+M+ + + + L + M E
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 293 LVD-PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD T S++ L+ + K+G+ +HG V+K D+ + L+ MY + G+ +
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F RM ++ V WT+MIS Y + P++A+ Y+ ME +G PDE+T+A+++SACA
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L +L +G+KLH + ++ + L++MY+KC + A +VF ++ DK+V +W+++
Sbjct: 193 LKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSAL 252
Query: 472 ILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
I G NNRS EAL FR++ N++PN VT+++++SACA++G L G+ +H + R
Sbjct: 253 IFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ 312
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG--ALAEEF 586
L N+L+DM+ +CG + A F+S + +D+ +WN ++ G+A G G ALA+
Sbjct: 313 KGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFR 372
Query: 587 FRKMIDSKGNWRKLMGLFRKC 607
+ D + + +G+ C
Sbjct: 373 LMQTTDLQPDEITFIGVLTAC 393
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 211/420 (50%), Gaps = 11/420 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +L++ C + G LH V K M H + + L+M+ GDL A ++F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M R+ W +I GY K +EAL LY++M G PD T ++ C + DL
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDL 196
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G ++H H+ + + +AL+ MY KCGDL AR VFD + +D +W+A+I GY
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGY 256
Query: 274 FENGEYMKGLMLFIMMREVL----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
+N + L LF REV + P+ +T+ +VISA +GD + GR VH Y+ +
Sbjct: 257 VKNNRSTEALQLF---REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
VS+ N LI M+ G+ + +++F M KD++SW +M++ + L +A+ +++
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRL 373
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ PDEIT VL+AC+ G + G KL +++ G+ ++D+ +
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433
Query: 449 CIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ +A E +P + W S++ R+ N + E + +L L+P + + +LS
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYN-NLELGEEAARFLLKLEPTNDGVYILLS 492
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 187/396 (47%), Gaps = 50/396 (12%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL M+E DE + LV C + G+ LHS + + + LG+A +
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K GDL A VF K+ D+D+++W+ LI GY K EAL L++ + ++P+
Sbjct: 223 NMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNE 282
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T V+ C + DL+ G+ VH ++ R V + N+LI M+ KCGD+ A+ +FD
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDS 342
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +D ISWN+M++G+ +G + L F +M+ + PD +T V++A G
Sbjct: 343 MSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAG----- 397
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV-----SWTTMIS 372
L+ +EG+K+F +E+ V + M+
Sbjct: 398 ---------------------LV---------QEGKKLFYEIEALYGVRLKSEHYGCMVD 427
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---TG 429
+ L +A E ++M + PD S+L AC NL+LG + + ++ T
Sbjct: 428 LLCRAGLLAEAREFIRVMPLQ---PDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTN 484
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
YI+++N +Y+K K ++ +V + +K +
Sbjct: 485 DGVYILLSN----IYAKRKMWNEVKKVRELMNEKGI 516
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 232/441 (52%), Gaps = 4/441 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F++ + FGD+ +A F ++ + D+ WN +I GY + D + +Y M + V P
Sbjct: 25 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHP 83
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ +TF VL+ CGG GK++H ++G+ ++V V N+L++MY K G + AR+VF
Sbjct: 84 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVF 143
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + R +SW ++ISGY +NG+ M+ L +F MR+ V PD++ L SV++A V D
Sbjct: 144 DKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLG 203
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG V K+G + + L MY G E F+RME +++ W MIS Y
Sbjct: 204 QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYA 263
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++A++ ++ M + D IT+ S + A A +G+L+L L ++
Sbjct: 264 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 323
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ LIDMY+KC I A VF ++ DK+V+ W+ +I+G L+ EA+ + +M
Sbjct: 324 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 383
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ PN T + +L+AC G + G E+ G+ + ++D+ R G + A+
Sbjct: 384 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 443
Query: 555 NQFNSN--ERDVSAWNILLTG 573
+ S + VS W LL+
Sbjct: 444 DFIMSMPIKPGVSVWGALLSA 464
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 182/353 (51%), Gaps = 2/353 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + N+ +SM+ KFG + +A VF K+ DR + SW +I GY + G EAL++++ M
Sbjct: 119 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
VKPD V+ V DL +GK +H V + G E + D+V +L TMY K G +
Sbjct: 179 QC-NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV 237
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR F+ M K + I WNAMISGY NG + + LF M + D +T+ S + AS
Sbjct: 238 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 297
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
VG +L R + GY+ K + DD V LI MY G+ VF R+ KDVV W+
Sbjct: 298 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 357
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI Y +A+ Y M+ G P++ T +L+AC G + G +L L
Sbjct: 358 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 417
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR 480
G+ + + ++D+ + +++A + +P K +S W +++ +++ +
Sbjct: 418 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRK 470
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 196/399 (49%), Gaps = 4/399 (1%)
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
K +V+V +I G ++ I + GD+ A F + + D + WNA+I GY
Sbjct: 1 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ + +++ M+ V P+ T V+ A E +G+++HG K GF +V
Sbjct: 61 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V N L+ MY FG VF ++ + VVSWT++IS Y + P +A+ ++ M
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
PD I + SV++A + +L G +H L + GL I +L MY+K ++ A
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 240
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARI 512
F+++ N+I W ++I G N EA+ FR+M+ N++ +S+T+ S + A A++
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G+L + + + + D F+ L+DMY +CG + A F+ ++DV W++++
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360
Query: 572 TGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKCQ 608
GY G G A + +M + N +GL C+
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACK 399
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL M++ N+ D ALV+++ +G +H +V+K +
Sbjct: 164 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 223
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +M+ K G + A + F +M +L WN +I GYA G+ +EA+ L++ M
Sbjct: 224 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI-TKN 282
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D T + V L+ + + ++ + Y D V LI MY KCG + AR
Sbjct: 283 IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLAR 342
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D + W+ MI GY +G + + L+ M++ V P+ T +++A + G
Sbjct: 343 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSG 402
Query: 313 DEKLGREV 320
K G E+
Sbjct: 403 LVKEGWEL 410
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 242/468 (51%), Gaps = 42/468 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + + SWN +I G+A + AL+LY M +G + P+ YTFP
Sbjct: 25 FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLG-LSPNSYTFPF 83
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---------------D 247
+ ++C + GK++H ++++G D+ V +LI+MY + G D
Sbjct: 84 LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143
Query: 248 LV----------------RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+V +A+ +FD +P +D +SWNAMISGY E G Y + L LF M +
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ V PD T+++V+S G+ +LGR++H ++ GF ++ + N LI +Y G E
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F ++ KDV+SW T+I Y +A+ +Q M G P+++T+ S+L ACA
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+I+ + +LIDMY+KC I+ A +VF I +K++ S
Sbjct: 324 LGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCN 383
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL-- 526
++I G ++ R+ A +M + ++P+ +T V +LSAC+ G G++I
Sbjct: 384 AMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLD 443
Query: 527 -RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILL 571
RI + + ++D+ R G K A NS E D W LL
Sbjct: 444 YRIEPKLEHY--GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 207/398 (52%), Gaps = 8/398 (2%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V T SH V A ++ + G++ A +F ++ +D+ SWN +I GYA+ G + EA
Sbjct: 135 VFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEA 194
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L L+ M + VKPD T VL TC +++ G+++H + G+ +++ +VNALI
Sbjct: 195 LELFNEMMKM-DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
+Y KCG++ RA +F+G+ +D ISWN +I GY + + L++F M ++ P+ +T
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 301 LSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
+ S++ A +G +GR +H Y+ K G + S+ LI MY GN E +VF
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ +K + S MI + D A + M+ +G PD+IT +LSAC+ G DLG
Sbjct: 374 ILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLG 433
Query: 419 IKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLR 476
K+ + + + + + +ID+ + +A E+ + + + + + W S++ +
Sbjct: 434 RKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACK 493
Query: 477 LN-NRSFEALIFFRKMMLNLK-PNSVTLVS-ILSACAR 511
++ N LI + M + K P S L+S I + AR
Sbjct: 494 IHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSAR 531
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 177/382 (46%), Gaps = 70/382 (18%)
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD------- 331
Y GL I + + + +P+ ++ +++I L D ++ Y+I +G S
Sbjct: 24 YFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPF 83
Query: 332 ----------------------------DVSVCNPLIKMY-------------------- 343
D+ V LI MY
Sbjct: 84 LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143
Query: 344 -----------LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
S GN ++ +K+F + KDVVSW MIS Y +A+E + M
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PDE T+A+VLS C GN++LG ++H G S + + N LID+YSKC +++
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A +F + K+VISW ++I G N EAL+ F++M+ L PN VT++SIL ACA
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323
Query: 512 IGALMCGKEIHAHALR--IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWN 568
+GA+ G+ IH + + G+ + L +L+DMY +CG ++ A F++ + +S+ N
Sbjct: 324 LGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCN 383
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
++ G+A G+ A + +M
Sbjct: 384 AMIFGFAMHGRADAAFDLLSRM 405
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++AL+ + M ++++ DE + ++ C + G +HS + +++L
Sbjct: 189 GRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV 248
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + ++ K G++ A +F + +D+ SWN LIGGYA EAL ++Q M +G
Sbjct: 249 NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGET 308
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALITMYVKCGDLVRA 251
DV T +L C + + G+ +HV++ + G + + +LI MY KCG++ A
Sbjct: 309 PNDV-TMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD + + S NAMI G+ +G L M++ ++PD +T ++SA
Sbjct: 368 NQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHA 427
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LGR++ M L + R+E K + + MI
Sbjct: 428 GLSDLGRKI------------------FKSMTLDY-----------RIEPK-LEHYGCMI 457
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---T 428
S L +A E M E PD + S+L AC NL+LG + Q M+
Sbjct: 458 DLLGRSGLFKEAEELINSMTME---PDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPK 514
Query: 429 GLISYIIIAN 438
SY++++N
Sbjct: 515 NPGSYVLLSN 524
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 33/270 (12%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF ++ + +SW TMI + S P A+ Y M + G P+ T + +CA
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI------------------------ 450
G ++H ++ GL + + +LI MY++ +
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 451 -------DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
DKA ++F +IP K+V+SW ++I G R EAL F +MM +++KP+ T+
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
++LS C G + G++IH+ G + L NAL+D+Y +CG M+ A F +
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+DV +WN L+ GYA A F++M+
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEML 303
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACAR 511
A+ VF I + N +SW ++I G L++ AL + M+ L L PNS T + +CA+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE---------- 561
A GK+IHA L+ G+ D + +L+ MY + G ++ A F+++
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 562 ----------------------RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNW 597
+DV +WN +++GYAE G+ A E F +M +D K +
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 598 RKLMGLFRKC 607
+ + C
Sbjct: 211 STMATVLSTC 220
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 227/433 (52%), Gaps = 16/433 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGF-FDEALSLYQRMFWVG 191
N LS + + ++ +F + + +++N++I + ALSL+ RM +
Sbjct: 58 NHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLS 117
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ PD +TFP +C + L H + + +D ++LIT Y +CG + A
Sbjct: 118 -LTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASA 176
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASEL 310
R VFD +P RD +SWN+MI+GY + G + + +F M R +PD M+L S++ A
Sbjct: 177 RKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGE 236
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+GD +LGR V G+V++ G + + + + LI MY G E ++F M ++DV++W +
Sbjct: 237 LGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAV 296
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y + + D+A+ + M+ + ++IT+ +VLSACA +G LDLG ++ + A + G
Sbjct: 297 ISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGF 356
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I +A LIDMY+K +D A VF +P KN SW ++I L + ++ EAL F+
Sbjct: 357 QHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQH 416
Query: 491 MMLN---LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLD 542
M +PN +T V +LSAC G + G + + G +P + ++D
Sbjct: 417 MSDEGGGARPNDITFVGLLSACVHAGLVDEGYRL----FDMMSTLFGLVPKIEHYSCMVD 472
Query: 543 MYVRCGRMKPAWN 555
+ R G + AW+
Sbjct: 473 LLARAGHLYEAWD 485
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 210/386 (54%), Gaps = 5/386 (1%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
HS++ K H ++ ++ + + G + A VF ++ RD SWN +I GYAKAG
Sbjct: 145 HSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCA 204
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
EA+ +++ M G +PD + +L CG + DL+ G+ V V+ G + + +A
Sbjct: 205 REAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSA 264
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
LI+MY KCG+L AR +FDGM RD I+WNA+ISGY +NG + ++LF M+E V +
Sbjct: 265 LISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTAN 324
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+TL++V+SA +G LG+++ Y + GF D+ V LI MY G+ + ++VF
Sbjct: 325 KITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFK 384
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMM--EAEGSMPDEITIASVLSACACLGNL 415
M K+ SW MIS +A+ +Q M E G+ P++IT +LSAC G +
Sbjct: 385 DMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLV 444
Query: 416 DLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
D G +L + M T GL+ I + ++D+ ++ + +A ++ ++P+K +L
Sbjct: 445 DEGYRLFDM-MSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALL 503
Query: 474 GLRLNNRSFEALIFFRKMMLNLKPNS 499
G + ++ + +M+L + P++
Sbjct: 504 GACRSKKNVDIGERVMRMILEVDPSN 529
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 199/428 (46%), Gaps = 13/428 (3%)
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMYVKCGDL 248
VGG +T C++ K ++VH ++ + + N L++ + +
Sbjct: 14 VGGKCKYYHTAECLVFLAKQCSSTKTLQQVHTQMV---VNSSIHTPNNHLLSKAIHLKNF 70
Query: 249 VRARLVFDGM-PKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ L+F + P + ++N MI Y L LF M + + PD T
Sbjct: 71 PYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFL 130
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ + H + K+ D + LI Y G KVF + +D VS
Sbjct: 131 SCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVS 190
Query: 367 WTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W +MI+ Y + +AVE + +M +G PDE+++ S+L AC LG+L+LG +
Sbjct: 191 WNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFV 250
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ G+ I + LI MY+KC ++ A +F + ++VI+W ++I G N + EA+
Sbjct: 251 VERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAI 310
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ F M + + N +TL ++LSACA IGAL GK+I +A + G D F+ AL+DMY
Sbjct: 311 LLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMY 370
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR----K 599
+ G + A F +++ ++WN +++ A G+ A F+ M D G R
Sbjct: 371 AKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDIT 430
Query: 600 LMGLFRKC 607
+GL C
Sbjct: 431 FVGLLSAC 438
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 3/210 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG ++A+ M+E + ++ L ++ C D G + S+
Sbjct: 294 NAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQ 353
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + A + M+ K G L +A VF M ++ SWN +I A G EALSL
Sbjct: 354 RGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSL 413
Query: 184 YQRMF-WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITM 241
+Q M GG +P+ TF +L C + G + + FG ++ + ++ +
Sbjct: 414 FQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDL 473
Query: 242 YVKCGDLVRARLVFDGMPKR-DRISWNAMI 270
+ G L A + MP++ D+++ A++
Sbjct: 474 LARAGHLYEAWDLIRKMPEKPDKVTLGALL 503
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 236/475 (49%), Gaps = 41/475 (8%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-------------------------- 191
+ DL SW+ LI GY + G +EAL Y M+ +G
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 192 -------------GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
G+ P+ ++ VL C G+ D G +VH ++I+ GY++D NAL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY K G A VF +PK D +SWNA+I+G + + L L M V P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
TLSS + A +G KLGR++H ++KM D V LI MY G ++ VF
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M KDV+ W ++IS Y +A+ + M EG ++ T++++L + A
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H +++++G +AN+L+D Y KC ++ A +VF P ++++++TS+I
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 479 NRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EAL ++ R ++KP++ S+ +ACA + A GK+IH H L+ G+ D F
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
N+L++MY +CG + A FN + R + +W+ ++ G A+ G G A + F +M+
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQML 584
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 224/429 (52%), Gaps = 2/429 (0%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M I +E +L ++ C + G+ +H + K NA L M+ K G
Sbjct: 179 MISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGC 238
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
A VF ++ D+ SWN +I G D AL L +M V P ++T L+
Sbjct: 239 PEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR-VAPSMFTLSSALK 297
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C + +K G+++H +++ E D V LI MY KCG L AR+VFD MP +D I
Sbjct: 298 ACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIV 357
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN++ISGY G ++ + LF M + ++ + TLS+++ ++ +VH I
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K G+ D V N L+ Y E+ KVF ++D+V++T+MI+ Y L ++A++
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALK 477
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
Y M+ PD +S+ +ACA L + G ++H ++ GL+S + N+L++MY+
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYA 537
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
KC ID A +F++I + ++SW+++I GL + +AL F +M+ N + PN +TLVS
Sbjct: 538 KCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVS 597
Query: 505 ILSACARIG 513
+LSAC G
Sbjct: 598 VLSACNHAG 606
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 204/438 (46%), Gaps = 51/438 (11%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+P +L D+ G +H +IR + + N L+ +Y KC AR +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMM------------------------------ 289
+ D +SW+A+ISGY +NG + L+ + M
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 290 --REVLV--------DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
R LV P+ +LS+V++A + DE G +VHGY+IK+G+ D N L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS---M 396
+ MY G E VF + D+VSW +I+ G VL +K +++ GS
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIA---GCVLHEKNDLALKLLGKMGSYRVA 286
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P T++S L ACA +G + LG +LH M+ + + LIDMYSKC + A V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F +P K+VI W SII G EA+ F M L+ N TL +IL + A A
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQAN 406
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGY 574
+++H +++ G +DG++ N+LLD Y +C ++ A F D+ A+ ++T Y
Sbjct: 407 GFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAY 466
Query: 575 AERGQGALAEEFFRKMID 592
++ G G A + + +M D
Sbjct: 467 SQYGLGEEALKMYLRMQD 484
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 2/420 (0%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
ALK L M + L + ++ C G LHS + K +G +
Sbjct: 273 ALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLID 332
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A VF M +D+ WN +I GY+ G+ EA+SL+ M+ G++ +
Sbjct: 333 MYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMY-KEGLEFNQT 391
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T +L++ G ++VH I+ GY+ D V N+L+ Y KC L A VF+
Sbjct: 392 TLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVC 451
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P D +++ +MI+ Y + G + L +++ M++ + PD SS+ +A + + G+
Sbjct: 452 PAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGK 511
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++H +V+K G DV N L+ MY G+ ++ +F+ + + +VSW+ MI
Sbjct: 512 QIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHG 571
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIA 437
KA++ + M G +P+ IT+ SVLSAC G + + L + G+
Sbjct: 572 HGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHY 631
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
++D+ + +D+A+ + ++P + + +LG +++ E +M+L L+P
Sbjct: 632 ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEP 691
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+ALK MQ+ +I D +L C Y++G +H V K V GN+
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSL 532
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K G + A +F ++ R + SW+ +IGG A+ G +AL L+ +M G+ P+
Sbjct: 533 VNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQML-KNGILPN 591
Query: 197 VYTFPCVLRTC 207
T VL C
Sbjct: 592 HITLVSVLSAC 602
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 250/507 (49%), Gaps = 70/507 (13%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ V K+ V + N + + K G L +F KM R++F+WN ++ G K GF
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 177 FDEALSLYQRM------FWVG------------------------GVKPDVYTFPCVLRT 206
DEA SL++ M W G + YTF L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C G+ D+ RG ++H + + +DV + +AL+ MY KCG++ A+ VFD M R+ +SW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
N++I+ Y +NG ++ L +F +M E V+PD +TL+SVISA + K+G+EVH V+K
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 327 MG-FSDDVSVCNPLIKMYLSFGNREEGEKVF----------------------------- 356
M +D+ + N + MY +E +F
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341
Query: 357 --SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
++M ++VVSW +I+ Y + ++A+ + +++ E P T A++L ACA L +
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAD 401
Query: 415 LDLGIKLHQLAMRTGLI------SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
L LG++ H ++ G I + N+LIDMY KC C+++ VF ++ +++ +SW
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 469 TSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
++I+G N EAL FR+M+ KP+ +T++ +LSAC G + G+ + R
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 528 -IGVAFDGFLPNALLDMYVRCGRMKPA 553
GVA ++D+ R G ++ A
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 242/534 (45%), Gaps = 80/534 (14%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ + E+AL Y M + ++E + + C + G+ +HS+++K
Sbjct: 121 NSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK 180
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V +G+A + M+ K G++ A VF +M DR++ SWN LI Y + G EAL +
Sbjct: 181 SPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKV 240
Query: 184 YQRMF--WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALIT 240
+Q M WV +PD T V+ C + +K G+EVH V++ D+ + NA +
Sbjct: 241 FQVMLESWV---EPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVD 297
Query: 241 MYVKCGDLVRARLVFDGMP-------------------------------KRDRISWNAM 269
MY KC + AR +FD MP +R+ +SWNA+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+GY +NGE + L LF +++ V P T ++++ A + D LG + H +V+K GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGF 417
Query: 330 ------SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
DD+ V N LI MY+ G EEG VF +M +D VSW MI + + ++A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLID 442
+E ++ M G PD IT+ VLSAC G ++ G R G+ ++D
Sbjct: 478 LELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTL 502
+ + +++A + ++P ++P+SV
Sbjct: 538 LLGRAGFLEEAKSIIEEMP---------------------------------VQPDSVIW 564
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL-DMYVRCGRMKPAWN 555
S+L+AC + GK + + + G P LL +MY G+ A N
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLFEVETSNSG--PYVLLSNMYAELGKWGDAMN 616
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 172/309 (55%), Gaps = 34/309 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS----- 372
R VH VIK GFS++V + N LI Y G+ E+G ++F +M ++V +W ++++
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 373 ------------------CYEGSVLP--------DKAVETYQMMEAEGSMPDEITIASVL 406
C S++ ++A+ + MM EG + +E T AS L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
SAC+ L +++ G+++H L ++ +S + I + L+DMYSKC ++ A +VF ++ D+NV+
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW S+I N + EAL F+ M+ + ++P+ VTL S++SACA + A+ G+E+HA
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279
Query: 526 LRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALA 583
+++ + D L NA +DMY +C R+K A F+S R+V A +++GYA A
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339
Query: 584 EEFFRKMID 592
F KM +
Sbjct: 340 RLMFTKMAE 348
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 34/225 (15%)
Query: 403 ASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
A +L +C L + ++ +H +++G + + I N LID Y+KC ++ ++F ++P
Sbjct: 23 AKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMP 82
Query: 462 DKNVISWTSIILGLR-------------------------------LNNRSFEALIFFRK 490
+NV +W S++ GL ++R EAL +F
Sbjct: 83 QRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAM 142
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M N T S LSAC+ + + G +IH+ + D ++ +AL+DMY +CG
Sbjct: 143 MHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGN 202
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ A F+ +R+V +WN L+T Y + G A + F+ M++S
Sbjct: 203 VNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLES 247
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+HA ++ G + + F+ N L+D Y +CG ++ F+ +R+V WN ++TG + G
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 580 GALAEEFFRKMID-SKGNWRKLMGLFRK 606
A+ FR M + + W ++ F +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQ 129
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 239/450 (53%), Gaps = 12/450 (2%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +VF ++ + WN++I YA +G F +++ LY M +G V P +TFP +L+ C
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-VTPTNFTFPFLLKACS 118
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR--ISW 266
+ L+ G+ +H H G D+ V AL+ MY KCG L +A+ +F+ + +DR ++W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
NAMI+ + + + + + M++ V P+ TL S++ G+ +H Y I+
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK---A 383
F D+V + L+ MY K+F+ + K+ V W+ MI G VL D A
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIG---GYVLHDSISDA 295
Query: 384 VETYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+ Y M+ G P T+A++L ACA L +L G KLH +++G+ + N+LI
Sbjct: 296 LALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLIS 355
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MY+KC +D A+ ++ K+ +S+++II G N + +AL+ FR+M + + P T
Sbjct: 356 MYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
++++L AC+ + AL G H + + G D + NA++DMY +CG++ + F+
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ 475
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
RD+ +WN ++ GY G A F+++
Sbjct: 476 NRDIISWNTMIIGYGIHGLCVEALSLFQEL 505
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 230/451 (50%), Gaps = 5/451 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +Q++ M +L + L++ C + G +H+ + + +
Sbjct: 85 SGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYV 144
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
A L M+ K G L A +F + DRD+ +WN +I ++ + + +M
Sbjct: 145 STALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQM-QQ 203
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV P+ T +L T G L +GK +H + IR + +V + AL+ MY KC L
Sbjct: 204 AGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFY 263
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASE 309
AR +F+ + K++ + W+AMI GY + L L+ M + ++P TL++++ A
Sbjct: 264 ARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACA 323
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ D K G+++H ++IK G D +V N LI MY G + M +KD VS++
Sbjct: 324 QLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSA 383
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS + +KA+ ++ M++ G P T+ ++L AC+ L L G H + G
Sbjct: 384 IISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRG 443
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ I N +IDMYSKC I + E+F ++ ++++ISW ++I+G ++ EAL F+
Sbjct: 444 FTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQ 503
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGK 519
++ L LKP+ VTL+++LSAC+ G + GK
Sbjct: 504 ELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 213/421 (50%), Gaps = 10/421 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + Q + + MQ+ + + LV+++ +G +H+ +
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V L A L M+ K L +A +F + ++ W+ +IGGY +AL+L
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y M + G+ P T +LR C + DLKRGK++H H+I+ G + D V N+LI+MY
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A D M +D +S++A+ISG +NG K L++F M+ + P T+ +
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + + G HGY + GF++D S+CN +I MY G ++F RM+++D
Sbjct: 419 LLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRD 478
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-- 421
++SW TMI Y L +A+ +Q ++A G PD++T+ +VLSAC+ G + G
Sbjct: 479 IISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS 538
Query: 422 ---HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
++ + YI ++D+ ++ +D+A ++P NV W +++ R
Sbjct: 539 SMSQNFNIKPRMAHYI----CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRT 594
Query: 478 N 478
+
Sbjct: 595 H 595
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 186/370 (50%), Gaps = 6/370 (1%)
Query: 230 ADVDVVNALITMY-VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+D D + Y + ++ AR VFD +PK + WN MI Y +G + + + L++
Sbjct: 38 SDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLH 97
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
M ++ V P T ++ A + +LGR +H + +G S D+ V L+ MY G+
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGH 157
Query: 349 REEGEKVFSRM--ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
+ + +F+ + + +D+V+W MI+ + L + + + M+ G P+ T+ S+L
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
L G +H +R +++ L+DMY+KC + A ++F+ + KN +
Sbjct: 218 PTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV 277
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAH 524
W+++I G L++ +AL + M+ L P TL ++L ACA++ L GK++H H
Sbjct: 278 CWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCH 337
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALA 583
++ G+ D + N+L+ MY +CG M A + +D +++ +++G + G A
Sbjct: 338 MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKA 397
Query: 584 EEFFRKMIDS 593
FR+M S
Sbjct: 398 LLIFRQMQSS 407
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 237/457 (51%), Gaps = 15/457 (3%)
Query: 139 MFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K + A +F ++F++N +I G+ GF +E YQ+M GV PD
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM-RNEGVMPDK 59
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TFPC ++ C V ++K+ +H + +FG E DV + +AL+ Y+K G + A++ F+
Sbjct: 60 FTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+P RD + WNAM++GY + G++ L F M + V P T++ ++S ++GD G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R +HG+ +KMG+ V+V N LI MY E+ ++F M KD+ SW ++ S +E
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL------I 431
D + M G PD +T+ +VL AC+ L L G ++H + +GL I
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ N +IDMY+KC + A VF ++ +K+V SW +I+G ++ EAL F +M
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRM 356
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVRCGR 549
+ LKP+ VT V +LSAC+ G + G+ A + VA ++DM R G+
Sbjct: 357 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQ 416
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAE 584
+ A+ + E + W LL LAE
Sbjct: 417 LDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 453
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 200/378 (52%), Gaps = 14/378 (3%)
Query: 241 MYVKCGDLVRARLVF-DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A +F D + + ++NA+ISG+ NG +G + MR V PD
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T I A V + K ++HG + K G DV + + L+ YL FG E + F +
Sbjct: 61 TFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DVV W M++ Y + +ET++ M E +P T+ +LS A +G+L+ G
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII-LGLRLN 478
+H AM+ G S + ++N+LIDMY KCKCI+ ALE+F + +K++ SW SI + +
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG---- 534
+ + R + ++P+ VT+ ++L AC+ + ALM G+EIH + + G+ DG
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 535 --FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM- 590
L NA++DMY +CG M+ A F +DV++WNI++ GY G G A E F +M
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 591 -IDSKGNWRKLMGLFRKC 607
+ K + +G+ C
Sbjct: 358 EVQLKPDEVTFVGVLSAC 375
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 21/446 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHS 119
N+ ++ NG E+ ++ M+ + D+ ++ C E K+ +H
Sbjct: 28 NAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKK-------IHG 80
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
++ K L V +G+A ++ ++KFG + HA F ++ RD+ WN ++ GYA+ G F+
Sbjct: 81 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 140
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++RM V P +T +L + DL G+ +H ++ GY++ V V N+LI
Sbjct: 141 VLETFRRM-NDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 199
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A +F+ M ++D SWN++ S + + G++ L L M + PD +
Sbjct: 200 DMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 259
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS------DDVSVCNPLIKMYLSFGNREEGE 353
T+++V+ A + GRE+HGY+I G DDV + N +I MY G+ +
Sbjct: 260 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 319
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF RM +KDV SW MI Y ++A+E + M PDE+T VLSAC+ G
Sbjct: 320 LVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 379
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
+ G L Q+ + + I +IDM + +D+A E+ +P + N + W ++
Sbjct: 380 FVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 439
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP 497
+ RL+ + A + ++ + L+P
Sbjct: 440 LAACRLHKHAVLAEVAAQR-VFELEP 464
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 251/529 (47%), Gaps = 15/529 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G + AL + M D+ +++ C G +H + L V +G
Sbjct: 126 GQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG 185
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + + + G + A Y+F +M +D WNV++ GY K G +D A ++ M
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE-T 244
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN--ALITMYVKCGDLVRA 251
P+ TF CVL C + G ++H V+ G E D V N ALI +Y KC D+ A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMA 304
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +FD D + AMISGY NG L +F + + + + +TL+SV+ A +
Sbjct: 305 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 364
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
LG+E+HG+++K G V + ++ MY G + + F + KD V W +MI
Sbjct: 365 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 424
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ + P++A++ ++ M G+ D ++I++ LSACA L L G ++H MR
Sbjct: 425 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR 484
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + + LIDMYSKC +D A VF + +KN +SW SII + R ++L F M
Sbjct: 485 SDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGM 544
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYV 545
+ + ++P+ VT ++I+SAC G + G H R G + ++D++
Sbjct: 545 LGDGIQPDHVTFLAIISACGHAGQVDEG----IHYFRCMTEELGIMARMEHYACMVDLFG 600
Query: 546 RCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R GR+ A+ NS D W LL G LAE R + D
Sbjct: 601 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 204/392 (52%), Gaps = 4/392 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+TC L +G++ H ++ G + + L+ MYV CG + A+ +F +
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN MI G+ G++ L+ + M PD T VI A + LGR VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ MGF DV V + LIK Y G + +F RM SKD V W M++ Y + D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT--L 440
A + M + P+ +T A VLS CA ++ G +LH L + +GL +ANT L
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
ID+Y KC+ ++ A ++F Q +++ T++I G LN + AL FR ++ ++ NS
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-N 558
VTL S+L ACA + AL GKE+H H L+ G ++ +A++DMY +CGR+ A F
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+++D WN ++T ++ G+ A + FR+M
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQM 443
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR+ H ++ G + + L+ MY+ G + + +F ++ W MI +
Sbjct: 65 GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D A+ Y M G++PD+ T V+ AC L ++ LG +H G + +
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
++LI YS+ CI A +F ++P K+ + W ++ G N A F +M
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPA 553
PNSVT +LS CA + G ++H + G+ D + N AL+D+Y +C ++ A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMA 304
Query: 554 WNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
F+ D+ +++GY G A E FR ++ +
Sbjct: 305 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ S+L C L G + H + G+ I+ L+ MY C A +F+Q+
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
W +I G + + AL+F+ KM+ P+ T ++ AC + ++ G+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQ 579
+H +G D F+ ++L+ Y G + A F+ +D WN++L GY + G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 580 GALAEEFFRKMIDSKGN 596
A F +M ++ N
Sbjct: 229 WDNATGVFMEMRRTETN 245
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 245/458 (53%), Gaps = 12/458 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L+ VK G L A +F +M +++ +W ++ GY + G + AL+++ M GV P+
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE-SGVAPN 113
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ L C + L+ G++VH +R G+ D + + LI MY +CG L A+ VFD
Sbjct: 114 DFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFD 173
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M D + + ++IS + NGE+ I M + + P+ T++++++A V L
Sbjct: 174 RMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 317 GREVHGYVI-KMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G+++HGY+I K+G S V LI Y G + + VF + K+VVSW +M+ Y
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++A++ + M +EG P+E ++ VL AC G++ LG +LH A++ LI+ I
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDI 346
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++N L+ MY + +++ + ++I + +++SWT+ I N +A+ +M
Sbjct: 347 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 406
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
PN S+LS+CA + +L G + H AL++G + NAL++MY +CG+M A
Sbjct: 407 GFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSA 466
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + DV++WN L+ G+A+ G A E F KM
Sbjct: 467 RLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 504
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 240/510 (47%), Gaps = 22/510 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E AL M E + ++ A + C G +HS+ + +
Sbjct: 92 NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 151
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+ + M+ + G L A VF +M D+ + LI + + G F+ A +M G
Sbjct: 152 GSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQML-KQG 210
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEAD-VDVVNALITMYVKCGDLVR 250
+KP+ +T +L C V G+++H ++I+ G + V ALI Y + G+
Sbjct: 211 LKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKL 266
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+ VFD + ++ +SW +M+ Y +G + L +F M VDP+ LS V+ A
Sbjct: 267 AKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS 326
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G LGR++H IK D+ V N L+ MY G EE E + +++E+ D+VSWTT
Sbjct: 327 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + +KA+ M +EG P+ +SVLS+CA + +LD G++ H LA++ G
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I N LI+MYSKC + A F + +V SW S+I G + + +AL F K
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMY 544
M N +KP+ T + +L C G + G+ R+ + F P ++DM
Sbjct: 504 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF----FRLMIDQYSFTPAPSHYACMIDML 559
Query: 545 VRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
R GR A N E D W LL
Sbjct: 560 GRNGRFDEALRMINDMPFEPDALIWKTLLA 589
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 13/267 (4%)
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D V C L ++ S G + +F RM K+VV+WT+++S Y + P+ A+ + M
Sbjct: 47 DVVLECKRLNRLVKS-GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
G P++ + L ACA LG L G ++H LA+R G I + LI+MYS+C +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILS 507
A EVF ++ +V+ +TS+I N + EALI K LKPN T+ +IL+
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ--GLKPNEHTMTTILT 223
Query: 508 ACARIGALMCGKEIHAHAL-RIGVAFDG-FLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
AC R+ G++IH + + +IG+ + AL+D Y R G K A F+S + ++V
Sbjct: 224 ACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
+W ++ Y G+ A + F MI
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMI 306
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 259/508 (50%), Gaps = 15/508 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM---SHLSVRLGNAFLSMFVKFG-DLGHA 149
+E L+R C + GL + + + KT SH+ V G A + MF K G D+ A
Sbjct: 144 NEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCV--GCALIDMFTKGGLDIQSA 201
Query: 150 WYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGG 209
VF KM ++L +W ++I Y++ G D+A+ L+ R+ V PD +T +L C
Sbjct: 202 RMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLL-VSEYTPDKFTLTSLLSACVE 260
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
+ GK++H VIR G +DV V L+ MY K + +R +F+ M + +SW A+
Sbjct: 261 LEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTAL 320
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
ISGY ++ + + + LF M V P+ T SSV+ A + D +G+++HG IK+G
Sbjct: 321 ISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGL 380
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
S V N LI MY G E K F+ + K+++S+ T ++ D++
Sbjct: 381 STINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HE 438
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
+E G T A +LS AC+G + G ++H L +++G + + I N LI MYSKC
Sbjct: 439 VEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGN 498
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSA 508
+ AL+VF+ + +NVI+WTSII G + + +AL F +M+ + +KPN VT +++LSA
Sbjct: 499 KEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSA 558
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNSNERDVSA 566
C+ +G L+ H +++ + + + ++D+ R G + A NS D A
Sbjct: 559 CSHVG-LIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADA 617
Query: 567 --WNILLTGYAERGQGALAEEFFRKMID 592
W L L E +K+++
Sbjct: 618 LVWRTFLGSCRVHRNTKLGEHAAKKILE 645
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 253/501 (50%), Gaps = 12/501 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-- 158
L++ C + G LH + + L L N+ ++++ K GD +A +F M
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRG 216
RDL SW+ +I +A AL + M + P+ Y F +LR+C G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 217 KEVHVHVIRFGY-EADVDVVNALITMYVKCG-DLVRARLVFDGMPKRDRISWNAMISGYF 274
+ +++ GY ++ V V ALI M+ K G D+ AR+VFD M ++ ++W MI+ Y
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ G + LF + PD TL+S++SA + LG+++H +VI+ G + DV
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ MY E K+F+ M +V+SWT +IS Y S +A++ + M
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P+ T +SVL ACA L + +G +LH ++ GL + + N+LI+MY++ ++ A
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARI 512
+ F+ + +KN+IS+ + N ++ ++ F + + + T +LS A I
Sbjct: 405 KAFNILFEKNLISYNT---AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACI 461
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
G ++ G++IHA ++ G + + NAL+ MY +CG + A FN R+V W ++
Sbjct: 462 GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSII 521
Query: 572 TGYAERGQGALAEEFFRKMID 592
+G+A+ G A E F +M++
Sbjct: 522 SGFAKHGFATKALELFYEMLE 542
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 247/466 (53%), Gaps = 36/466 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QA++ M+ I ++E + V ++ +C + G LH++V K + NA +
Sbjct: 172 QAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALM 231
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G L +F +M RD+ SWN +I K ++ A L++ M + G + D
Sbjct: 232 GLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDH 291
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL--------- 248
+T +L G+ + G+E+H HVI+ G+E+++ V+NALI Y KCG +
Sbjct: 292 FTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEK 350
Query: 249 --VR--------------------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
VR A VFD MP R+ IS+NA++SG+ +NGE K L F
Sbjct: 351 MRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFF 410
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M E V+ TL+ V++A L+ + K+ +++HG+++K GF + + L+ M
Sbjct: 411 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 470
Query: 347 GNREEGEKVFSRMESKDV--VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIA 403
G + +K+FS+ + WT+MI Y + P++A+ + + EG+M D++
Sbjct: 471 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST 530
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+VL C L ++G ++H A+++G +S + + N++I MYSKC +D A++VF+ +P
Sbjct: 531 AVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAH 590
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSA 508
+++SW +I G L+ + EAL + KM +KP++VT V I+SA
Sbjct: 591 DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 636
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 239/498 (47%), Gaps = 39/498 (7%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ L NA + ++K G + +A+ VF + ++ S+ +I G+AK+ +A+ ++ RM
Sbjct: 123 IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM-R 181
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++ + ++F +L C + DL+ G ++H VI+ G+ V NAL+ +Y KCG L
Sbjct: 182 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 241
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISAS 308
+FD MP RD SWN +IS + Y + LF MR + D TLS+++ A+
Sbjct: 242 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 301
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ +GRE+H +VIK+GF ++SV N LI+ Y G+ + +F +M +DV++WT
Sbjct: 302 RGLAS-MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 360
Query: 369 TMISCYEGSVLPDKAVETYQMMEA-------------------------------EGSMP 397
MI+ Y L D A+E + M A EG
Sbjct: 361 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 420
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA--LE 455
+ T+ VL+AC L + ++H ++ G S I L+DM ++C + A +
Sbjct: 421 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 480
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIG 513
I WTS+I G N + EA+ F + L + + V ++L C +
Sbjct: 481 SQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA 540
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
GK+IH HAL+ G D + N+++ MY +C M A FN D+ +WN L+
Sbjct: 541 FHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIA 600
Query: 573 GYAERGQGALAEEFFRKM 590
G+ QG A + KM
Sbjct: 601 GHLLHRQGDEALSVWSKM 618
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 39/412 (9%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D++ K VH + + D+ + NALI Y+K G + A VF G+ + +S+ AMIS
Sbjct: 105 DVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 162
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G+ ++ + + +F MR ++ + + ++++ + D +LG ++H VIKMGF +
Sbjct: 163 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 222
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ-MM 390
V N L+ +Y G + ++F M +D+ SW T+IS ++ ++A E ++ M
Sbjct: 223 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMR 282
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+G D T++++L A L ++ +G ++H ++ G S I + N LI Y+KC I
Sbjct: 283 RIDGFRIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSI 341
Query: 451 -------------------------------DKALEVFHQIPDKNVISWTSIILGLRLNN 479
D ALEVF ++P +N IS+ +I+ G N
Sbjct: 342 KHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 401
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+AL FF +M+ ++ TL +L+AC + K+IH L+ G + +
Sbjct: 402 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 461
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSA---WNILLTGYAERGQGALAEEFF 587
ALLDM RCGRM A F+ S W ++ GYA Q A F
Sbjct: 462 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLF 513
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 155/284 (54%), Gaps = 12/284 (4%)
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D +L + VH + K+ ++D+ + N LI YL G KVF + +VVS+T MIS
Sbjct: 105 DVELIKAVHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 162
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ S +A+E + M + G +E + ++L+ C L +L+LG +LH + ++ G ++
Sbjct: 163 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 222
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL---RLNNRSFEALIFFR 489
Y ++N L+ +Y KC +D L++F ++P +++ SW ++I + + R+FE FR
Sbjct: 223 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFE---LFR 279
Query: 490 KM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + + + TL +IL A AR A M G+EIHAH ++IG + + NAL+ Y +C
Sbjct: 280 DMRRIDGFRIDHFTLSTILVA-ARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKC 338
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
G +K F RDV W ++T Y E G LA E F KM
Sbjct: 339 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKM 382
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 175/404 (43%), Gaps = 51/404 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C NG +AL + M E + + + L ++ C GL + + +SK
Sbjct: 391 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC--------GLLMEAKISK 442
Query: 124 TMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFS--WNVLIGGYAK 173
+ ++ G A L M + G + A +F + S W +I GYA+
Sbjct: 443 QIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYAR 502
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+EA+SL+ + G + D VL CG + + GK++H H ++ G+ +D+
Sbjct: 503 NAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLG 562
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N++ITMY KC ++ A VF+ MP D +SWN +I+G+ + + + L ++ M +
Sbjct: 563 VGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG 622
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T +ISA S+ V C +++LS
Sbjct: 623 IKPDTVTFVLIISAYRHTN-----------------SNLVDNCR---RLFLSM------- 655
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K ++ V +T+++ L ++A E M E P+ ++L AC
Sbjct: 656 KTIYHIDPT-VEHYTSLVGVLGYWGLLEEAEEMINKMPIE---PEASVWRALLDACRIHS 711
Query: 414 NLDLGIKL--HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
N +G + H LAM+ S I+ + L Y + C D E
Sbjct: 712 NTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVRE 755
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 232/441 (52%), Gaps = 4/441 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
F++ + FGD+ +A F ++ + D+ WN +I GY + D + +Y M + V P
Sbjct: 40 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHP 98
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ +TF VL+ CGG GK++H ++G+ ++V V N+L++MY K G + AR+VF
Sbjct: 99 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVF 158
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + R +SW ++ISGY +NG+ M+ L +F MR+ V PD++ L SV++A V D
Sbjct: 159 DKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLG 218
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG V K+G + + L MY G E F+RME +++ W MIS Y
Sbjct: 219 QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYA 278
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++A++ ++ M + D IT+ S + A A +G+L+L L ++
Sbjct: 279 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 338
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLN 494
+ LIDMY+KC I A VF ++ DK+V+ W+ +I+G L+ EA+ + +M
Sbjct: 339 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 398
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ PN T + +L+AC G + G E+ G+ + ++D+ R G + A+
Sbjct: 399 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 458
Query: 555 NQFNSN--ERDVSAWNILLTG 573
+ S + VS W LL+
Sbjct: 459 DFIMSMPIKPGVSVWGALLSA 479
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 182/353 (51%), Gaps = 2/353 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + N+ +SM+ KFG + +A VF K+ DR + SW +I GY + G EAL++++ M
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
VKPD V+ V DL +GK +H V + G E + D+V +L TMY K G +
Sbjct: 194 QC-NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV 252
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR F+ M K + I WNAMISGY NG + + LF M + D +T+ S + AS
Sbjct: 253 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 312
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
VG +L R + GY+ K + DD V LI MY G+ VF R+ KDVV W+
Sbjct: 313 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 372
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI Y +A+ Y M+ G P++ T +L+AC G + G +L L
Sbjct: 373 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 432
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR 480
G+ + + ++D+ + +++A + +P K +S W +++ +++ +
Sbjct: 433 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRK 485
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 197/400 (49%), Gaps = 4/400 (1%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
LK +V+V +I G ++ I + GD+ A F + + D + WNA+I G
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + + +++ M+ V P+ T V+ A E +G+++HG K GF +
Sbjct: 75 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V V N L+ MY FG VF ++ + VVSWT++IS Y + P +A+ ++ M
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
PD I + SV++A + +L G +H L + GL I +L MY+K ++
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
A F+++ N+I W ++I G N EA+ FR+M+ N++ +S+T+ S + A A+
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+G+L + + + + D F+ L+DMY +CG + A F+ ++DV W+++
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374
Query: 571 LTGYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKCQ 608
+ GY G G A + +M + N +GL C+
Sbjct: 375 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACK 414
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 1/248 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL M++ N+ D ALV+++ +G +H +V+K +
Sbjct: 179 NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDI 238
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +M+ K G + A + F +M +L WN +I GYA G+ +EA+ L++ M
Sbjct: 239 VISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI-TKN 297
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D T + V L+ + + ++ + Y D V LI MY KCG + AR
Sbjct: 298 IRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLAR 357
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D + W+ MI GY +G + + L+ M++ V P+ T +++A + G
Sbjct: 358 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSG 417
Query: 313 DEKLGREV 320
K G E+
Sbjct: 418 LVKEGWEL 425
>gi|302790281|ref|XP_002976908.1| hypothetical protein SELMODRAFT_106129 [Selaginella moellendorffii]
gi|300155386|gb|EFJ22018.1| hypothetical protein SELMODRAFT_106129 [Selaginella moellendorffii]
Length = 704
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 236/474 (49%), Gaps = 12/474 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS + S+ + A + M+ G L A VF M RD+ +W +I +A+
Sbjct: 143 GKQIHSQIVAAGWDSSLIVSTALIDMYAACGSLRGAIRVFQGMKKRDVVAWTAIIAAFAQ 202
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G ++A Y+ M + G P + TF +L D RG+ +H H+ E+++
Sbjct: 203 YGHLEKAFLTYRGML-LEGFLPVLVTFLALLNALAEERDWDRGRWIHRHITEMKLESELS 261
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ ALITM+ KCGDL +AR VF + + D +NA+++ + ENGE+ L+LF M+E
Sbjct: 262 MAAALITMFGKCGDLKKARRVFRRIHQPDLEVYNALLAAHTENGEFWNALLLFRRMQEDG 321
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD T+ + A D + G+ +H VI D+ V N LI MY G+ E+ E
Sbjct: 322 VAPDRETVLVALGACIRPVDLEHGKGIHVSVINHDLEKDIDVANALIYMYSKCGSLEDAE 381
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F R+E +VSW T+++ Y ++A+ +++ M EG P S L AC L
Sbjct: 382 WMFQRVERPSMVSWRTLLAAYVKHGRNEEALISFRKMLLEGISPGRGACVSALRACGSLR 441
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII- 472
G +H + GL S+ + T+++MY KCKC++ A VF +I N SW SI+
Sbjct: 442 LPGQGRLIHLIVRELGLESHNRVVCTVVEMYGKCKCLEDARSVFEKIEQPNPSSWNSIVA 501
Query: 473 --LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE----IHAHA 525
L +F L FR+M+L+ +KP+ T +LSAC + IH+
Sbjct: 502 AYLDCGCMEEAFGQL--FRRMLLDGVKPDKTTFTLVLSACMEAQEAPVSADQVAFIHSFI 559
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERG 578
+ + D + LL Y RC ++ A+ F+ N V+ WN +++ +AE G
Sbjct: 560 IECELETDATIAVFLLSAYGRCKALQEAYAVFSKNHHLGVAVWNAMISAFAENG 613
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 258/504 (51%), Gaps = 13/504 (2%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGK 155
A ++L+R + G+ +H +VS+ + + + + M+VK G A VF +
Sbjct: 25 AYIHLLRAYANSKDLQAGILIHDRIVSRGLDR-DPTIADHVVYMYVKCGSFETAKSVFQR 83
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M D + SWN +I G+A+ +EA++ ++R+ + GV P T+ L C G L
Sbjct: 84 MPDPGILSWNRIIAGHAQRHELEEAIATFRRLL-LQGVTPGRITYVAALGACCGSRFLPV 142
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK++H ++ G+++ + V ALI MY CG L A VF GM KRD ++W A+I+ + +
Sbjct: 143 GKQIHSQIVAAGWDSSLIVSTALIDMYAACGSLRGAIRVFQGMKKRDVVAWTAIIAAFAQ 202
Query: 276 NGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
G K F+ R +L++ P +T ++++A D GR +H ++ +M +
Sbjct: 203 YGHLEKA---FLTYRGMLLEGFLPVLVTFLALLNALAEERDWDRGRWIHRHITEMKLESE 259
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+S+ LI M+ G+ ++ +VF R+ D+ + +++ + + A+ ++ M+
Sbjct: 260 LSMAAALITMFGKCGDLKKARRVFRRIHQPDLEVYNALLAAHTENGEFWNALLLFRRMQE 319
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
+G PD T+ L AC +L+ G +H + L I +AN LI MYSKC ++
Sbjct: 320 DGVAPDRETVLVALGACIRPVDLEHGKGIHVSVINHDLEKDIDVANALIYMYSKCGSLED 379
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACAR 511
A +F ++ +++SW +++ + R+ EALI FRKM+L + P VS L AC
Sbjct: 380 AEWMFQRVERPSMVSWRTLLAAYVKHGRNEEALISFRKMLLEGISPGRGACVSALRACGS 439
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNIL 570
+ G+ IH +G+ + +++MY +C ++ A + F E+ + S+WN +
Sbjct: 440 LRLPGQGRLIHLIVRELGLESHNRVVCTVVEMYGKCKCLEDARSVFEKIEQPNPSSWNSI 499
Query: 571 LTGYAERG--QGALAEEFFRKMID 592
+ Y + G + A + F R ++D
Sbjct: 500 VAAYLDCGCMEEAFGQLFRRMLLD 523
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 237/488 (48%), Gaps = 21/488 (4%)
Query: 74 GSLEQA-LKYLDSMQE--LNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
G LE+A L Y + E L + V AL+N L E +R +D G ++H +++ +
Sbjct: 204 GHLEKAFLTYRGMLLEGFLPVLVTFLALLNA--LAE-ERDWDRGRWIHRHITEMKLESEL 260
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ A ++MF K GDL A VF ++ DL +N L+ + + G F AL L++RM
Sbjct: 261 SMAAALITMFGKCGDLKKARRVFRRIHQPDLEVYNALLAAHTENGEFWNALLLFRRM-QE 319
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
GV PD T L C DL+ GK +HV VI E D+DV NALI MY KCG L
Sbjct: 320 DGVAPDRETVLVALGACIRPVDLEHGKGIHVSVINHDLEKDIDVANALIYMYSKCGSLED 379
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A +F + + +SW +++ Y ++G + L+ F R++L++ + +SA
Sbjct: 380 AEWMFQRVERPSMVSWRTLLAAYVKHGRNEEALISF---RKMLLEGISPGRGACVSALRA 436
Query: 311 VGDEKL---GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G +L GR +H V ++G V +++MY E+ VF ++E + SW
Sbjct: 437 CGSLRLPGQGRLIHLIVRELGLESHNRVVCTVVEMYGKCKCLEDARSVFEKIEQPNPSSW 496
Query: 368 TTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC----ACLGNLDLGIKLH 422
++++ Y + + + + ++ M +G PD+ T VLSAC + D +H
Sbjct: 497 NSIVAAYLDCGCMEEAFGQLFRRMLLDGVKPDKTTFTLVLSACMEAQEAPVSADQVAFIH 556
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ L + IA L+ Y +CK + +A VF + V W ++I N
Sbjct: 557 SFIIECELETDATIAVFLLSAYGRCKALQEAYAVFSKNHHLGVAVWNAMISAFAENGVPK 616
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGA--LMCGKEIHAHALRIGVAFDGFLPNA 539
+ F++M + PN T +L+A +GA L GK +H+ A+++G+ D + A
Sbjct: 617 NGFLLFQRMAREGVMPNRSTFAGVLNAIGSVGASGLEQGKIVHSEAVQLGIELDPIVATA 676
Query: 540 LLDMYVRC 547
L++MY C
Sbjct: 677 LVNMYHGC 684
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 181/395 (45%), Gaps = 8/395 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L NG AL MQE + D + ++ + C + G +H V
Sbjct: 295 NALLAAHTENGEFWNALLLFRRMQEDGVAPDRETVLVALGACIRPVDLEHGKGIHVSVIN 354
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA + M+ K G L A ++F ++ + SW L+ Y K G +EAL
Sbjct: 355 HDLEKDIDVANALIYMYSKCGSLEDAEWMFQRVERPSMVSWRTLLAAYVKHGRNEEALIS 414
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+++M + G+ P LR CG + +G+ +H+ V G E+ VV ++ MY
Sbjct: 415 FRKML-LEGISPGRGACVSALRACGSLRLPGQGRLIHLIVRELGLESHNRVVCTVVEMYG 473
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL-MLFIMMREVLVDPDFMTLS 302
KC L AR VF+ + + + SWN++++ Y + G + LF M V PD T +
Sbjct: 474 KCKCLEDARSVFEKIEQPNPSSWNSIVAAYLDCGCMEEAFGQLFRRMLLDGVKPDKTTFT 533
Query: 303 SVISASELVGDEKLGRE----VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
V+SA + + + +H ++I+ D ++ L+ Y +E VFS+
Sbjct: 534 LVLSACMEAQEAPVSADQVAFIHSFIIECELETDATIAVFLLSAYGRCKALQEAYAVFSK 593
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG--NLD 416
V W MIS + + +P +Q M EG MP+ T A VL+A +G L+
Sbjct: 594 NHHLGVAVWNAMISAFAENGVPKNGFLLFQRMAREGVMPNRSTFAGVLNAIGSVGASGLE 653
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G +H A++ G+ I+A L++MY C C+D
Sbjct: 654 QGKIVHSEAVQLGIELDPIVATALVNMYHGCNCVD 688
>gi|255555443|ref|XP_002518758.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542139|gb|EEF43683.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 379
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 202/376 (53%), Gaps = 4/376 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ KFG +G A +F +M RD SWN +I GY + G E L + M GV D +
Sbjct: 1 MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMR-KDGVAMDAF 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L C + D+ GK +H+ VI+ G E D V NALI MY K G L A+ VFD M
Sbjct: 60 AVASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHM 119
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD +SWN++I+ Y +N + F MR++ V PD +T+ S+ S + D + R
Sbjct: 120 VVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSR 179
Query: 319 EVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+HG+V + G F D + N ++ MY G E VF R+ KDV+SW T+I+ Y +
Sbjct: 180 SIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQN 239
Query: 378 VLPDKAVETYQMM-EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
L +A+E Y MM E + P + T S+L A + LG L G++ H ++ L + +
Sbjct: 240 GLASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFV 299
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
LIDMY KC +D A+ +F+++P K+ + W +II ++ + + FR+M+ + +
Sbjct: 300 GTCLIDMYGKCGKLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGV 359
Query: 496 KPNSVTLVSILSACAR 511
KP+ + + + S +
Sbjct: 360 KPDQLVAIQVWSVMVK 375
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 186/356 (52%), Gaps = 4/356 (1%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY K G + AR +FD MP RD SWNAMISGY +NG ++ L + MR+ V D
Sbjct: 1 MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFA 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
++S++ + D G+ +H VIK+G D V N LI MY FG+ +KVF M
Sbjct: 61 VASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMV 120
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+D+VSW ++I+ YE + A + M G PD +T+ S+ S A L +
Sbjct: 121 VRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSRS 180
Query: 421 LHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H R G + +I N ++DMY+K + A VF ++P K+VISW ++I G N
Sbjct: 181 IHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNG 240
Query: 480 RSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ EA+ + M + P T VSIL A + +GAL G H H ++ + D F+
Sbjct: 241 LASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVG 300
Query: 538 NALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
L+DMY +CG++ A + F R D WN +++ +A G G + FR+MID
Sbjct: 301 TCLIDMYGKCGKLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMID 356
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 173/346 (50%), Gaps = 3/346 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C NG++ + L +D M++ + +D A+ +++ +C G +H +V K
Sbjct: 27 NAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFAVASILPVCAKLNDVLSGKLIHLLVIK 86
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ NA ++M+ KFG LG A VF M RD+ SWN +I Y + A S
Sbjct: 87 LGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMVVRDIVSWNSIIAAYEQNDDAATARSF 146
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+ +M + GV+PD+ T + + D + + +H V R G + D + NA++ MY
Sbjct: 147 FDKMRQI-GVRPDLLTVLSLASIVAQLNDHQNSRSIHGFVTRRGWFMKDTVIGNAVVDMY 205
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTL 301
K G AR VF+ +P +D ISWN +I+GY +NG + + ++ MM E V P T
Sbjct: 206 AKLGATESARAVFERLPVKDVISWNTLITGYAQNGLASEAIEVYNMMEECKEVSPTQGTW 265
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++ A +G G HG+VIK DV V LI MY G ++ +F +
Sbjct: 266 VSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLIDMYGKCGKLDDAMSLFYEVPR 325
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
KD V W +ISC+ +K ++ ++ M +G PD++ V S
Sbjct: 326 KDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGVKPDQLVAIQVWS 371
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 13/271 (4%)
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDE 399
MY FG E K+F M +D SW MIS C G+V+ + ++ M +G D
Sbjct: 1 MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVV--EVLDIVDEMRKDGVAMDA 58
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+AS+L CA L ++ G +H L ++ GL ++N LI MY+K + A +VF
Sbjct: 59 FAVASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDH 118
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCG 518
+ ++++SW SII N+ + A FF KM + ++P+ +T++S+ S A++
Sbjct: 119 MVVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNS 178
Query: 519 KEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
+ IH R G D + NA++DMY + G + A F +DV +WN L+TGYA+
Sbjct: 179 RSIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQ 238
Query: 577 RGQGALAEEFFRKMIDSK------GNWRKLM 601
G + A E + M + K G W ++
Sbjct: 239 NGLASEAIEVYNMMEECKEVSPTQGTWVSIL 269
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 247/466 (53%), Gaps = 36/466 (7%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
QA++ M+ I ++E + V ++ +C + G LH++V K + NA +
Sbjct: 154 QAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALM 213
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G L +F +M RD+ SWN +I K ++ A L++ M + G + D
Sbjct: 214 GLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDH 273
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL--------- 248
+T +L G+ + G+E+H HVI+ G+E+++ V+NALI Y KCG +
Sbjct: 274 FTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEK 332
Query: 249 --VR--------------------ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
VR A VFD MP R+ IS+NA++SG+ +NGE K L F
Sbjct: 333 MRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFF 392
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M E V+ TL+ V++A L+ + K+ +++HG+++K GF + + L+ M
Sbjct: 393 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 452
Query: 347 GNREEGEKVFSRMESKDV--VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIA 403
G + +K+FS+ + WT+MI Y + P++A+ + + EG+M D++
Sbjct: 453 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST 512
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
+VL C L ++G ++H A+++G +S + + N++I MYSKC +D A++VF+ +P
Sbjct: 513 AVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAH 572
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSA 508
+++SW +I G L+ + EAL + KM +KP++VT V I+SA
Sbjct: 573 DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 618
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 239/498 (47%), Gaps = 39/498 (7%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ L NA + ++K G + +A+ VF + ++ S+ +I G+AK+ +A+ ++ RM
Sbjct: 105 IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM-R 163
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G++ + ++F +L C + DL+ G ++H VI+ G+ V NAL+ +Y KCG L
Sbjct: 164 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 223
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISAS 308
+FD MP RD SWN +IS + Y + LF MR + D TLS+++ A+
Sbjct: 224 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 283
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ +GRE+H +VIK+GF ++SV N LI+ Y G+ + +F +M +DV++WT
Sbjct: 284 RGLAS-MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 342
Query: 369 TMISCYEGSVLPDKAVETYQMMEA-------------------------------EGSMP 397
MI+ Y L D A+E + M A EG
Sbjct: 343 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 402
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA--LE 455
+ T+ VL+AC L + ++H ++ G S I L+DM ++C + A +
Sbjct: 403 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 462
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIG 513
I WTS+I G N + EA+ F + L + + V ++L C +
Sbjct: 463 SQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA 522
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
GK+IH HAL+ G D + N+++ MY +C M A FN D+ +WN L+
Sbjct: 523 FHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIA 582
Query: 573 GYAERGQGALAEEFFRKM 590
G+ QG A + KM
Sbjct: 583 GHLLHRQGDEALSVWSKM 600
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 39/412 (9%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D++ K VH + + D+ + NALI Y+K G + A VF G+ + +S+ AMIS
Sbjct: 87 DVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 144
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G+ ++ + + +F MR ++ + + ++++ + D +LG ++H VIKMGF +
Sbjct: 145 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 204
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ-MM 390
V N L+ +Y G + ++F M +D+ SW T+IS ++ ++A E ++ M
Sbjct: 205 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMR 264
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+G D T++++L A L ++ +G ++H ++ G S I + N LI Y+KC I
Sbjct: 265 RIDGFRIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSI 323
Query: 451 -------------------------------DKALEVFHQIPDKNVISWTSIILGLRLNN 479
D ALEVF ++P +N IS+ +I+ G N
Sbjct: 324 KHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 383
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+AL FF +M+ ++ TL +L+AC + K+IH L+ G + +
Sbjct: 384 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 443
Query: 539 ALLDMYVRCGRMKPAWNQFNSNERDVSA---WNILLTGYAERGQGALAEEFF 587
ALLDM RCGRM A F+ S W ++ GYA Q A F
Sbjct: 444 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLF 495
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 155/284 (54%), Gaps = 12/284 (4%)
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D +L + VH + K+ ++D+ + N LI YL G KVF + +VVS+T MIS
Sbjct: 87 DVELIKAVHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMIS 144
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ S +A+E + M + G +E + ++L+ C L +L+LG +LH + ++ G ++
Sbjct: 145 GFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN 204
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL---RLNNRSFEALIFFR 489
Y ++N L+ +Y KC +D L++F ++P +++ SW ++I + + R+FE FR
Sbjct: 205 YTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFE---LFR 261
Query: 490 KM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + + + TL +IL A AR A M G+EIHAH ++IG + + NAL+ Y +C
Sbjct: 262 DMRRIDGFRIDHFTLSTILVA-ARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKC 320
Query: 548 GRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
G +K F RDV W ++T Y E G LA E F KM
Sbjct: 321 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKM 364
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 175/404 (43%), Gaps = 51/404 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C NG +AL + M E + + + L ++ C GL + + +SK
Sbjct: 373 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC--------GLLMEAKISK 424
Query: 124 TMSHLSVRLG--------NAFLSMFVKFGDLGHAWYVFGKMCDRDLFS--WNVLIGGYAK 173
+ ++ G A L M + G + A +F + S W +I GYA+
Sbjct: 425 QIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYAR 484
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+EA+SL+ + G + D VL CG + + GK++H H ++ G+ +D+
Sbjct: 485 NAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLG 544
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N++ITMY KC ++ A VF+ MP D +SWN +I+G+ + + + L ++ M +
Sbjct: 545 VGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG 604
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T +ISA S+ V C +++LS
Sbjct: 605 IKPDTVTFVLIISAYRHTN-----------------SNLVDNCR---RLFLSM------- 637
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K ++ V +T+++ L ++A E M E P+ ++L AC
Sbjct: 638 KTIYHIDPT-VEHYTSLVGVLGYWGLLEEAEEMINKMPIE---PEASVWRALLDACRIHS 693
Query: 414 NLDLGIKL--HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
N +G + H LAM+ S I+ + L Y + C D E
Sbjct: 694 NTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVRE 737
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 263/513 (51%), Gaps = 21/513 (4%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKM 156
L L++ C G LH K + H+S + L L+++ K G L + +FG+M
Sbjct: 974 LAALLKSCVAXSAIRFGSVLHGYALK-LGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEM 1032
Query: 157 CDRDLFSWNVLIGGYAKAGFFD---EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
RD WN+++ G AGF E + L++ M V KP+ T VL C + +
Sbjct: 1033 DQRDPVIWNIVLSGL--AGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE- 1089
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR-ARLVFDGMPKRDRISWNAMISG 272
GK VH +VI+ G E+ NALI+MY KCG + A F+ + +D +SWNA+I+G
Sbjct: 1090 DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 1149
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI---SASELVGDEKLGREVHGYVI-KMG 328
+ EN + LF M + + P++ T++S++ ++ E + G+EVH +V+ +M
Sbjct: 1150 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRME 1209
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY- 387
+DVSV N L+ YL E+ E +F M+S+D+VSW +I+ Y + KA+E +
Sbjct: 1210 LVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 1269
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-TGLISYIIIANTLIDMYSK 446
+ + E PD +T+ SVL ACA + NL + +H +R GL + N L+ Y+K
Sbjct: 1270 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 1329
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSI 505
C AL+ F I K++ISW +I+ + + M+ ++P+S+T+++I
Sbjct: 1330 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 1389
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLP---NALLDMYVRCGRMKPAWNQFN--SN 560
+ A + + KE H++++R G+ P N +LD Y +CG MK A N F S
Sbjct: 1390 IQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSE 1449
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+R+V N +++GY A F M ++
Sbjct: 1450 KRNVVTCNSMISGYVTSSSHDDAYAIFNTMSET 1482
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 274/585 (46%), Gaps = 59/585 (10%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
N E+A K +M + I + + +++ +C E GY G +H V + M +
Sbjct: 1153 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 1212
Query: 130 -VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V + N+ +S +++ + A ++F M RDL SWN +I GYA G + +AL L+
Sbjct: 1213 DVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFI 1272
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGD 247
+ +KPD T VL C V +L+ K +H ++IR G D V NAL++ Y KC
Sbjct: 1273 SLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNY 1332
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENG-EYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A F + ++D ISWNA++ + E+G E +L M+RE + PD +T+ ++I
Sbjct: 1333 TQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-IRPDSITILTIIQ 1391
Query: 307 ASELVGDEKLGREVHGYVIKMGF-----------------------------------SD 331
V K +E H Y I+ G
Sbjct: 1392 YYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 1451
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V CN +I Y++ + ++ +F+ M D+ +W M+ Y + PD+A+ + ++
Sbjct: 1452 NVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 1511
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G PD +TI S+L ACA + ++ + + H +R + + + IDMYSKC +
Sbjct: 1512 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA-CFNDVRLNGAFIDMYSKCGSVF 1570
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F P K+++ +T+++ G ++ EAL F M+ L +KP+ V + ++L AC+
Sbjct: 1571 GAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACS 1630
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERD 563
G + G +I ++ GF P ++D+ R GR+K A+ E +
Sbjct: 1631 HAGLVDEGWKIFNSIEKV----HGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEAN 1686
Query: 564 VSAWNILL----TGYAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ W LL T + +A+ F+ D+ GN+ + L+
Sbjct: 1687 ANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLY 1731
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 209/414 (50%), Gaps = 15/414 (3%)
Query: 178 DEALSLY-QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
DEALSL+ +R+ G KP+ +L++C ++ G +H + ++ G+ + +
Sbjct: 951 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCK 1010
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY--FENGEYMKGLMLFIMMREV-L 293
L+ +Y K G L +F M +RD + WN ++SG F++ E + + LF M V
Sbjct: 1011 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHE-AEVMRLFRAMHMVNE 1069
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-EEG 352
P+ +T++ V+ + E G+ VH YVIK G N LI MY G +
Sbjct: 1070 AKPNSVTIAIVLPVCARL-REDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDA 1128
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
F+R+E KDVVSW +I+ + + ++A + + M P+ TIAS+L CA L
Sbjct: 1129 YAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASL 1188
Query: 413 ---GNLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
G ++H + R L+ + + N+L+ Y + ++KA +F + ++++SW
Sbjct: 1189 EENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSW 1248
Query: 469 TSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
+II G N +AL F + + +KP+SVTLVS+L ACA + L K IH + +
Sbjct: 1249 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYII 1308
Query: 527 R-IGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
R G+ D + NALL Y +C + A F + +D+ +WN +L + E G
Sbjct: 1309 RHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESG 1362
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 225/409 (55%), Gaps = 33/409 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G+L +A +F + D LF +NV++ YAK G + L L+Q++ G+ PD +T+P
Sbjct: 144 LGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQL-REDGLWPDGFTYPF 202
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ G + D+++G++V +++ G + D V N+LI MY + ++ A+ +FD M RD
Sbjct: 203 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRD 262
Query: 263 RISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+SWN MISGY + + F M +E PD T+ S +SA + + +LG E+H
Sbjct: 263 SVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH 322
Query: 322 GYVIK-MGFS------------------------DDVSVCN-----PLIKMYLSFGNREE 351
YV K +GF+ D++S+ N +I Y++ G+ E
Sbjct: 323 NYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLRE 382
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + +DVV WT MI+ Y D AV ++ M+ + PD+ T+ ++L+ CA
Sbjct: 383 ARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQ 442
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG L+ G +H + +++ LI+MYSKC C+DK+LE+F+++ DK+ SWTSI
Sbjct: 443 LGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSI 502
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK 519
I GL +N ++ EAL F +M + KP+ +T + +LSAC+ G + G+
Sbjct: 503 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR 551
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 219/442 (49%), Gaps = 42/442 (9%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC--GDLVRARLVFDGMPKR 261
LR C + LK ++ + R G E D D +N L+ G+L A +F+ +
Sbjct: 104 LRNCKSMDQLK---QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 160
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+N M+ Y + G K L+LF +RE + PD T V+ A + D + G +V
Sbjct: 161 SLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 220
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G+++K G D V N LI MY N E +K+F M ++D VSW MIS Y +
Sbjct: 221 GFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFE 280
Query: 382 KAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A+ T++ M+ EG+ PDE T+ S LSAC L NL+LG ++H +R L I N L
Sbjct: 281 DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNAL 339
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG------LRLNNRSFE----------- 483
+DMY+KC C++ A +F ++ KNVI WTS+I G LR F+
Sbjct: 340 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 399
Query: 484 --------------ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
A+ FR+M + +KP+ T+V++L+ CA++GAL GK IH +
Sbjct: 400 AMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 459
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
+ D + AL++MY +CG + + F ++D ++W ++ G A G+ + A F
Sbjct: 460 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 519
Query: 588 RKM--IDSKGNWRKLMGLFRKC 607
+M + +K + +G+ C
Sbjct: 520 SEMERVGAKPDDITFIGVLSAC 541
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 35/389 (8%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R +G + + KT L + N+ + M+ + ++ +A +F +M RD SWNV+I
Sbjct: 211 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMI 270
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FG 227
GY + F++A++ ++ M G KPD T L C + +L+ G E+H +V + G
Sbjct: 271 SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELG 330
Query: 228 YEADVDVVNALITMYVKCG-------------------------------DLVRARLVFD 256
+ +D NAL+ MY KCG DL AR +FD
Sbjct: 331 FTTRID--NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 388
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P RD + W AMI+GY + + + LF M+ + PD T+ ++++ +G +
Sbjct: 389 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQ 448
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ +HGY+ + + DV V LI+MY G ++ ++F +E KD SWT++I
Sbjct: 449 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 508
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YII 435
+ +A+ + ME G+ PD+IT VLSAC+ G ++ G + + I +
Sbjct: 509 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 568
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+ID+ + +D+A E+ +IP +N
Sbjct: 569 HYGCVIDLLGRAGLLDEAEELIQEIPIEN 597
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 10/189 (5%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+ A+ MQ I D+ +V L+ C ++G ++H + + + V +G A
Sbjct: 411 FDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 470
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G + + +F ++ D+D SW +I G A G EAL L+ M VG KP
Sbjct: 471 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA-KP 529
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEV-----HVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
D TF VL C ++ G+ VH I E V+ +I + + G L
Sbjct: 530 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI----EPKVEHYGCVIDLLGRAGLLDE 585
Query: 251 ARLVFDGMP 259
A + +P
Sbjct: 586 AEELIQEIP 594
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 248/499 (49%), Gaps = 46/499 (9%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H ++ NA LS L +F M RD+ S+N +I G++ G +A
Sbjct: 63 VFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQA 122
Query: 181 LSLYQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
+ +Y + V+P T ++ + D GK+ H ++R G+ A+ V + L+
Sbjct: 123 VRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLV 182
Query: 240 TMYVK---CGDLVR----------------------------ARLVFDGMPKRDRISWNA 268
MY K GD R AR +F+ M RD I+W
Sbjct: 183 DMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTT 242
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
M++G+ +NG + L +F MR + D T S+++A + + G+++H Y+I+
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ D+V V + L+ MY + + E VF RM K+++SWT +I Y + ++AV +
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ +G PD+ T+ SV+S+CA L +L+ G + H LA+ +GL+ YI ++N L+ +Y KC
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
I+ A +F ++ + +SWT+++ G R+ E + F KM+ +KP+ VT + +LS
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKPAWNQFNSN-- 560
AC+R G + G+ + H+++ G +P ++D+Y R G++K A +F
Sbjct: 483 ACSRAGFVEKGRS-YFHSMQKD---HGIVPIDDHYTCMIDLYSRSGKLKEA-EEFIKQMP 537
Query: 561 -ERDVSAWNILLTGYAERG 578
D W LL+ RG
Sbjct: 538 MHPDAIGWGTLLSACRLRG 556
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 219/442 (49%), Gaps = 68/442 (15%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMP-------------------------------KRD 262
++N L+T Y K G RAR VFD MP +RD
Sbjct: 43 LLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRD 102
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREV 320
+S+NA+I+G+ G + + + +++ + + V P +T+S+++ A+ +GD LG++
Sbjct: 103 IVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQF 162
Query: 321 HGYVIKMGFSDDVSVCNPLIKMY-------------------------------LSFGNR 349
H ++++GF + V +PL+ MY L
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
EE ++F M +D ++WTTM++ + + L +A+E ++ M +G D+ T S+L+AC
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L L+ G ++H +RT + + + L+DMYSKC+ I A VF ++ KN+ISWT
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I+G N S EA+ F +M + + P+ TL S++S+CA + +L G + H AL
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
G+ + NAL+ +Y +CG ++ A F+ D +W L++GYA+ G+ + F
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLF 462
Query: 588 RKMIDS--KGNWRKLMGLFRKC 607
KM+ K + +G+ C
Sbjct: 463 EKMLAKGVKPDGVTFIGVLSAC 484
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 194/372 (52%), Gaps = 14/372 (3%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
KR +DE V SK +V + N ++ ++ + A +F M DRD +W +
Sbjct: 195 KRAFDE------VDSK-----NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTM 243
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+ G+ + G EAL +++RM + G+ D YTF +L CG + L++GK++H ++IR
Sbjct: 244 VTGFTQNGLESEALEIFRRMRF-QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
Y+ +V V +AL+ MY KC + A VF M ++ ISW A+I GY +NG + + +F
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M+ +DPD TL SVIS+ + + G + H + G ++V N L+ +Y G
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ E+ ++F M D VSWT ++S Y + ++ ++ M A+G PD +T VLS
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482
Query: 408 ACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNV 465
AC+ G ++ G H + G++ +ID+YS+ + +A E Q+P +
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDA 542
Query: 466 ISWTSIILGLRL 477
I W +++ RL
Sbjct: 543 IGWGTLLSACRL 554
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 149/304 (49%), Gaps = 7/304 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ M+ I +D+ +++ C ++G +H+ + +T +V +
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A + M+ K + A VF +M +++ SW LI GY + G +EA+ ++ M G
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEM-QRDG 368
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD YT V+ +C + L+ G + H + G + V NAL+T+Y KCG + A
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M D++SW A++SGY + G + + LF M V PD +T V+SA G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 313 DEKLGRE-VHGYVIKMGFS--DDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWT 368
+ GR H G DD C +I +Y G +E E+ +M D + W
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTC--MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546
Query: 369 TMIS 372
T++S
Sbjct: 547 TLLS 550
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 249/504 (49%), Gaps = 16/504 (3%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G H+ + KT+ + L + N ++M+ K A + +R + +W LI G
Sbjct: 25 GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G F AL + M ++P+ +TFPC + G + GK+VH ++ G +DV
Sbjct: 85 QNGRFTSALFHFSNM-RRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V + MY K G AR +FD MP+R+ +WNA +S G Y L FI R
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+P+ +T + ++A +LGR++HG+V++ GF DVSV N LI Y
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS 263
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
E +FS + + VSW +MI Y + +KA + EG P + ++SVLSACA L
Sbjct: 264 EIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGL 323
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L++G +H LA++ ++ I + + L+DMY KC I+ A F ++P++N+++W ++I
Sbjct: 324 SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMI 383
Query: 473 LGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCGKEI-HAHALRI 528
G ++ A+ F +M + PN VT V +LSAC+R G++ G EI + R
Sbjct: 384 GGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY 443
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLT-----GYAERGQG 580
G+ ++D+ R G ++ A+ QF VS W LL G +E G+
Sbjct: 444 GIEPGAEHYACVVDLLGRAGMVEQAY-QFIKKMPIRPTVSVWGALLGASKMFGKSELGKV 502
Query: 581 ALAEEFFRKMIDSKGNWRKLMGLF 604
A F +DS GN L +F
Sbjct: 503 AADNLFELDPLDS-GNHVLLSNMF 525
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 202/405 (49%), Gaps = 4/405 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL + +M+ +I ++ + R G +H++ K V +
Sbjct: 86 NGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFV 145
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + M+ K G A +F +M +R++ +WN + G +D+AL+ + F G
Sbjct: 146 GCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE-FRHEG 204
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+P++ TF L C G L+ G+++H V++ G+EADV V N LI Y KC + +
Sbjct: 205 WEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSE 264
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++F G+ K + +SW +MI Y +N E K ++F+ R+ ++P +SSV+SA +
Sbjct: 265 IIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLS 324
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++G+ VH +K ++ V + L+ MY G+ E+ E+ F M +++V+W MI
Sbjct: 325 VLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIG 384
Query: 373 CYEGSVLPDKAVETYQMME--AEGSMPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTG 429
Y D AV + M + P+ +T VLSAC+ G++++G+++ + + R G
Sbjct: 385 GYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYG 444
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ ++D+ + +++A + ++P + +S +LG
Sbjct: 445 IEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 489
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSR 358
+L+S++ ++ +LGR H +IK + S + N L+ MY + + S
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 359 MESKDVVSWTTMISCYEGSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
++ VV+WT +I+ GSV + A+ + M + P++ T A L +
Sbjct: 68 TPNRSVVTWTALIA---GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP 124
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+G ++H LA++ G IS + + + DMYSK ++A ++F ++P++N+ +W + +
Sbjct: 125 LVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNS 184
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
L R +AL F + +PN +T + L+ACA L G+++H L+ G D
Sbjct: 185 VLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADV 244
Query: 535 FLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQ 579
+ N L+D Y +C ++ + F+ S DVS W ++ Y + +
Sbjct: 245 SVANGLIDFYGKCHQVGCSEIIFSGISKPNDVS-WCSMIVSYVQNDE 290
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 225/409 (55%), Gaps = 33/409 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
G+L +A +F + D LF +NV++ YAK G + L L+Q++ G+ PD +T+P
Sbjct: 190 LGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQL-REDGLWPDGFTYPF 248
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL+ G + D+++G++V +++ G + D V N+LI MY + ++ A+ +FD M RD
Sbjct: 249 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRD 308
Query: 263 RISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+SWN MISGY + + F M +E PD T+ S +SA + + +LG E+H
Sbjct: 309 SVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH 368
Query: 322 GYVIK-MGFS------------------------DDVSVCN-----PLIKMYLSFGNREE 351
YV K +GF+ D++S+ N +I Y++ G+ E
Sbjct: 369 NYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLRE 428
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + +DVV WT MI+ Y D AV ++ M+ + PD+ T+ ++L+ CA
Sbjct: 429 ARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQ 488
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
LG L+ G +H + +++ LI+MYSKC C+DK+LE+F+++ DK+ SWTSI
Sbjct: 489 LGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSI 548
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK 519
I GL +N ++ EAL F +M + KP+ +T + +LSAC+ G + G+
Sbjct: 549 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR 597
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 219/442 (49%), Gaps = 42/442 (9%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC--GDLVRARLVFDGMPKR 261
LR C + LK ++ + R G E D D +N L+ G+L A +F+ +
Sbjct: 150 LRNCKSMDQLK---QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 206
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+N M+ Y + G K L+LF +RE + PD T V+ A + D + G +V
Sbjct: 207 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 266
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G+++K G D V N LI MY N E +K+F M ++D VSW MIS Y +
Sbjct: 267 GFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFE 326
Query: 382 KAVETYQMMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
A+ T++ M+ EG+ PDE T+ S LSAC L NL+LG ++H +R L I N L
Sbjct: 327 DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNAL 385
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG------LRLNNRSFE----------- 483
+DMY+KC C++ A +F ++ KNVI WTS+I G LR F+
Sbjct: 386 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 445
Query: 484 --------------ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
A+ FR+M + +KP+ T+V++L+ CA++GAL GK IH +
Sbjct: 446 AMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 505
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
+ D + AL++MY +CG + + F ++D ++W ++ G A G+ + A F
Sbjct: 506 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 565
Query: 588 RKM--IDSKGNWRKLMGLFRKC 607
+M + +K + +G+ C
Sbjct: 566 SEMERVGAKPDDITFIGVLSAC 587
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 35/389 (8%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R +G + + KT L + N+ + M+ + ++ +A +F +M RD SWNV+I
Sbjct: 257 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMI 316
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FG 227
GY + F++A++ ++ M G KPD T L C + +L+ G E+H +V + G
Sbjct: 317 SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELG 376
Query: 228 YEADVDVVNALITMYVKCG-------------------------------DLVRARLVFD 256
+ +D NAL+ MY KCG DL AR +FD
Sbjct: 377 FTTRID--NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 434
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P RD + W AMI+GY + + + LF M+ V PD T+ ++++ +G +
Sbjct: 435 KSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQ 494
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+ +HGY+ + + DV V LI+MY G ++ ++F +E KD SWT++I
Sbjct: 495 GKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 554
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ +A+ + ME G+ PD+IT VLSAC+ G ++ G + + I +
Sbjct: 555 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 614
Query: 437 A-NTLIDMYSKCKCIDKALEVFHQIPDKN 464
+ID+ + +D+A E+ +IP +N
Sbjct: 615 HYGCVIDLLGRAGLLDEAEELIQEIPIEN 643
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 10/189 (5%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+ A+ MQ + D+ +V L+ C ++G ++H + + + V +G A
Sbjct: 457 FDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 516
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G + + +F ++ D+D SW +I G A G EAL L+ M VG KP
Sbjct: 517 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA-KP 575
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEV-----HVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
D TF VL C ++ G+ VH I E V+ +I + + G L
Sbjct: 576 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI----EPKVEHYGCVIDLLGRAGLLDE 631
Query: 251 ARLVFDGMP 259
A + +P
Sbjct: 632 AEELIQEIP 640
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 253/501 (50%), Gaps = 35/501 (6%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM---SHLSVRLGNAFLSMFVK---FGDLG 147
+E ++R C + GL L V KT SH+ V G + MFVK DL
Sbjct: 155 NEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCV--GCELIDMFVKGCSLADLE 212
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
A VF KM ++++ +W ++I A+ G+ DEA+ L+ M G PD +T ++ C
Sbjct: 213 SARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
+ L GKE+H VIR G D+ V +L+ MY KCG + AR VFDGM + + +SW
Sbjct: 273 AEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWT 332
Query: 268 AMISGYFENG-----EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
A+++GY G E M+ M M+ + V P+ T S V+ A + D G +VHG
Sbjct: 333 ALVNGYVRGGGGYEREAMR--MFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHG 390
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
IK+G S V N L+ +Y G E K F + K++VS T + + + + D
Sbjct: 391 QTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVV----DDTNVKDF 446
Query: 383 AVETYQMMEAE----GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+ + Q ++ E GS T AS+LS AC+G + G ++H + ++ G + + + N
Sbjct: 447 NLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNN 506
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LI MYSKC + AL+VF+ + D NVI+WTSII G + + +AL F M+ +KP
Sbjct: 507 ALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKP 566
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKP 552
N VT +++LSAC+ +G L+ H ++R G +P ++D+ R G +
Sbjct: 567 NDVTYIAVLSACSHVG-LIDEAWKHFTSMRDN---HGIVPRMEHYACMVDLLGRSGLLSE 622
Query: 553 AWNQFNSNERDVSA--WNILL 571
A NS D A W L
Sbjct: 623 AIEFINSMPFDADALVWRTFL 643
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 257/508 (50%), Gaps = 18/508 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CD 158
L++ C + G LH ++ + L L N+ ++++ K D A+ +F M
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RD+ S++ +I +A +A+ ++ ++ GV P+ Y F V+R C K G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 219 VHVHVIRFGY-EADVDVVNALITMYVK---CGDLVRARLVFDGMPKRDRISWNAMISGYF 274
+ V++ GY ++ V V LI M+VK DL AR VFD M +++ ++W MI+
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237
Query: 275 ENGEYMKGLMLFIMMREVLVD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+ G + + LF+ E+LV PD TL+ +IS + LG+E+H +VI+ G
Sbjct: 238 QYGYNDEAIDLFL---EMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQ 388
D+ V L+ MY G +E KVF M +V+SWT +++ Y G +A+ +
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354
Query: 389 MMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M +G + P+ T + VL ACA L + D G ++H ++ GL + + N L+ +Y+K
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKS 414
Query: 448 KCIDKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
++ A + F + +KN++S T + ++ N + E + + +S T S+L
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLL 474
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVS 565
S A IG + G++IHA ++IG D + NAL+ MY +CG + A FN E +V
Sbjct: 475 SGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVI 534
Query: 566 AWNILLTGYAERGQGALAEEFFRKMIDS 593
W ++ G+A+ G + A E F M+++
Sbjct: 535 TWTSIINGFAKHGFASKALELFYNMLET 562
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 200/372 (53%), Gaps = 12/372 (3%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
T +L+ C + GK +H + D ++N+LIT+Y K D + A +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 259 --PKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEK 315
KRD +S++++IS + N +K + +F ++ + V P+ ++VI A G K
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 316 LGREVHGYVIKMGFSDD-VSVCNPLIKMYL---SFGNREEGEKVFSRMESKDVVSWTTMI 371
G + G+V+K G+ D V V LI M++ S + E KVF +M K+VV+WT MI
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ D+A++ + +M+ + G +PD T+ ++S CA + L LG +LH +R+GL
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF--EALIFF 488
+ + + +L+DMY+KC + +A +VF + + NV+SWT+++ G + EA+ F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 489 RKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
M+L + PN T +L ACA + G+++H +++G++ + N L+ +Y +
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAK 413
Query: 547 CGRMKPAWNQFN 558
GRM+ A F+
Sbjct: 414 SGRMESARKCFD 425
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 15/240 (6%)
Query: 382 KAVETYQMMEAEGSMPDEITIASVL-SACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
KA+ T + + E + +++ +S+L C N LG LH + L ++ N+L
Sbjct: 34 KAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSL 93
Query: 441 IDMYSKCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LK 496
I +YSK A +F + + ++V+S++SII N +A+ F +++L +
Sbjct: 94 ITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVY 153
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVR---CGRMK 551
PN +++ AC + G G + L+ G FD + L+DM+V+ ++
Sbjct: 154 PNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGY-FDSHVCVGCELIDMFVKGCSLADLE 212
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
A F+ E++V W +++T A+ G A + F +M+ S G + L GL C
Sbjct: 213 SARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
>gi|255550217|ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544645|gb|EEF46161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1439
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 228/439 (51%), Gaps = 5/439 (1%)
Query: 157 CD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
CD D+ WN + Y +AG F A+ + M VK D T VL G DL
Sbjct: 946 CDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDLM 1005
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
GK +H ++ G+++ V V N+LI MY K G + A VF GM + D ISWN+MIS Y
Sbjct: 1006 LGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYA 1065
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDV 333
+NG + + L + + + PD TL+SV+ A S L L +++H YV K +
Sbjct: 1066 QNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAEN 1125
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V LI +Y G E E +F D+ +W M+ Y DK ++ + M +
Sbjct: 1126 FVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEK 1185
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G DE T+A+ AC L L+ G ++H LA++ GL S + +++ ++DMY KC ++
Sbjct: 1186 GESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDG 1245
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
+F IP + ++WT +I G N AL +R+M L+ + P+ T +++ A + +
Sbjct: 1246 HLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPDEYTFATLIKASSCL 1305
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
AL G++IHA+ +++ A D F+ +L+DMY +CG ++ A+ F + R++ WN +L
Sbjct: 1306 TALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRMDVRNIVVWNAML 1365
Query: 572 TGYAERGQGALAEEFFRKM 590
A+ G G A F+ M
Sbjct: 1366 VSLAQHGHGEEALHLFKVM 1384
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 239/454 (52%), Gaps = 6/454 (1%)
Query: 64 NSRLNELCLNGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N +L+E G+ A+ +++ + ++ D LV ++ G +H +
Sbjct: 956 NKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHGMTL 1015
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ V + N+ ++M+ K G + A VF M + DL SWN +I YA+ G E+++
Sbjct: 1016 KSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVN 1075
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITM 241
L + G++PD +T VL+ C + + L K++HV+V + A+ V ALI +
Sbjct: 1076 LLVGLLR-DGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDV 1134
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y + G + A +F+ K D +WNAM+ GY G++ KGL LF M E D TL
Sbjct: 1135 YSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTL 1194
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ A + + G+++H IK G + D+ + + ++ MY+ GN E+G +F +
Sbjct: 1195 ATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPV 1254
Query: 362 KDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D V+WT MIS C E D+A+ Y+ M G +PDE T A+++ A +CL L+ G +
Sbjct: 1255 PDDVAWTIMISGCVENGD-EDRALSVYRQMRLSGILPDEYTFATLIKASSCLTALEQGRQ 1313
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ S + +LIDMY+KC I+ A +F ++ +N++ W ++++ L +
Sbjct: 1314 IHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGH 1373
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
EAL F+ M + +KP+ VT + +LSAC+ G
Sbjct: 1374 GEEALHLFKVMQSHSIKPDKVTFIGVLSACSHSG 1407
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 242/512 (47%), Gaps = 36/512 (7%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
++E + + L +++LC +H K L V + A ++++ KFG
Sbjct: 801 LRERFVSTSKLTLAPMLKLCLLSGYVCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGL 860
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ A +F M +RD+ WNV++ Y + G EALS + + F G++PD + CV+
Sbjct: 861 VREARGLFDIMQERDVVLWNVMLKAYVEMGLVKEALSFFSQ-FHQSGLRPDDASMRCVV- 918
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEAD---VDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
G+ ++ GY+ ++ + A T C D D
Sbjct: 919 --SGISEV-------------GYDTGRRYIEQIQAYATKLFFCDD------------NTD 951
Query: 263 RISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+ WN +S Y + G + + FI M+ V D +TL V++A+ GD LG+ +H
Sbjct: 952 VVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIH 1011
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
G +K GF VSV N LI MY G VF+ M D++SW +MISCY + L
Sbjct: 1012 GMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQK 1071
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMRTGLISYIIIANTL 440
++V + +G PD T+ASVL AC+ L L L ++H +T +I+ ++ L
Sbjct: 1072 ESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTAL 1131
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP-NS 499
ID+YS+ + +A +F ++ +W +++ G + + L F M + +
Sbjct: 1132 IDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDE 1191
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-N 558
TL + AC + L GK+IHA A++ G+ D FL + +LDMY++CG M+ F N
Sbjct: 1192 YTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDN 1251
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D AW I+++G E G A +R+M
Sbjct: 1252 IPVPDDVAWTIMISGCVENGDEDRALSVYRQM 1283
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 217/454 (47%), Gaps = 39/454 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA--GFFDEALSLYQ--RM 187
L N ++M+ K G + A +F + DRDL +WN ++ YA++ +D + + R+
Sbjct: 741 LANNLITMYSKCGSVSSARQLFDRTPDRDLVTWNAVLSAYARSDESEYDHVVEGFHIFRL 800
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V T +L+ C + + VH + ++ G E DV V AL+ +Y K G
Sbjct: 801 LRERFVSTSKLTLAPMLKLCLLSGYVCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGL 860
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR +FD M +RD + WN M+ Y E G + L F + + PD ++ V+S
Sbjct: 861 VREARGLFDIMQERDVVLWNVMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSG 920
Query: 308 SELVGDEKLGR---EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
VG + R ++ Y K+ F DD + DV
Sbjct: 921 ISEVGYDTGRRYIEQIQAYATKLFFCDD----------------------------NTDV 952
Query: 365 VSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W +S Y + AV+ + M+ + D +T+ VL+A G+L LG +H
Sbjct: 953 VMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHG 1012
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ +++G S + +AN+LI+MYSK + A VF + + ++ISW S+I N E
Sbjct: 1013 MTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKE 1072
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNALL 541
++ ++ + L+P+ TL S+L AC+ + L K+IH + + + + F+ AL+
Sbjct: 1073 SVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALI 1132
Query: 542 DMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGY 574
D+Y R G M A F N N+ D++AWN ++ GY
Sbjct: 1133 DVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGY 1166
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 184/356 (51%), Gaps = 8/356 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYL----HS 119
NS ++ NG ++++ L + + D L ++++ C EGL+L H
Sbjct: 1058 NSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACS---SLTEGLFLSKQIHV 1114
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V+KT + A + ++ + G + A ++F DL +WN ++ GY G D+
Sbjct: 1115 YVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDK 1174
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L L+ M G D YT + CG + L++GK++H I+FG +D+ + + ++
Sbjct: 1175 GLKLFAFMH-EKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGIL 1233
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY+KCG++ L+FD +P D ++W MISG ENG+ + L ++ MR + PD
Sbjct: 1234 DMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVYRQMRLSGILPDEY 1293
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T +++I AS + + GR++H VIK+ + D V LI MY G E+ +F RM
Sbjct: 1294 TFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRM 1353
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
+ +++V W M+ ++A+ +++M++ PD++T VLSAC+ G++
Sbjct: 1354 DVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDKVTFIGVLSACSHSGHV 1409
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 37/386 (9%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LR +L GK +H ++I G +D + N LITMY KCG + AR +FD P RD
Sbjct: 710 LLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDRD 769
Query: 263 RISWNAMISGYFENGE-----YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++WNA++S Y + E ++G +F ++RE V +TL+ ++ L G
Sbjct: 770 LVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLSGYVCAS 829
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+ VHGY +K+G DV V L+ +Y FG E +F M+ +DVV W M+ Y
Sbjct: 830 QAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYVEM 889
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L +A+ + G PD+ ++ V+S + +G D G + YI
Sbjct: 890 GLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEVG-YDTGRR------------YI--- 933
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NL 495
I Y A ++F + +V+ W + + A+ F M+ ++
Sbjct: 934 -EQIQAY--------ATKLFFCDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHV 984
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPA 553
K ++VTLV +L+A G LM GK IH L+ G FD + N+L++MY + G + A
Sbjct: 985 KYDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSG--FDSVVSVANSLINMYSKMGFVSLA 1042
Query: 554 WNQFNS-NERDVSAWNILLTGYAERG 578
F NE D+ +WN +++ YA+ G
Sbjct: 1043 HTVFTGMNELDLISWNSMISCYAQNG 1068
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
S+L A NL LG +H + +GL S +AN LI MYSKC + A ++F + PD+
Sbjct: 709 SLLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDR 768
Query: 464 NVISWTSIILGLRLNNRS-----FEALIFFRKMMLNLKPNS-VTLVSILSACARIGALMC 517
++++W +++ ++ S E FR + S +TL +L C G +
Sbjct: 769 DLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLSGYVCA 828
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
+ +H +A++IG+ D F+ AL+++Y + G ++ A F+ ERDV WN++L Y E
Sbjct: 829 SQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYVE 888
Query: 577 RGQGALAEEFFRKMIDS 593
G A FF + S
Sbjct: 889 MGLVKEALSFFSQFHQS 905
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
F L + +S S L LG+ +H +I G + D + N LI MY G+ ++F
Sbjct: 708 FSLLRAAVSTSNL----HLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFD 763
Query: 358 RMESKDVVSWTTMISCYEGSVLP--DKAVE---TYQMMEAEGSMPDEITIASVLSACACL 412
R +D+V+W ++S Y S D VE ++++ ++T+A +L C
Sbjct: 764 RTPDRDLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLS 823
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
G + +H A++ GL + ++ L+++YSK + +A +F + +++V+ W ++
Sbjct: 824 GYVCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVML 883
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
EAL FF + + L+P+ ++ ++S + +G
Sbjct: 884 KAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEVG 925
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 247/501 (49%), Gaps = 50/501 (9%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N LS + K G L VF M + D+ SWN L+ GYA G E++ +Y M G V
Sbjct: 75 NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134
Query: 194 KPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGY----------------------- 228
+ TF +L + G DL G+++H + +FGY
Sbjct: 135 NLNRITFSTMLILSSNRGFVDL--GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDA 192
Query: 229 --------EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
E ++ V N +IT ++C +V A +FD MP++D ISW +I+G +NG +
Sbjct: 193 NRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFK 252
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASE--LVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ + F M D T SV++A L DE G+++H Y+I+ + D++ V +
Sbjct: 253 EAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDE--GKQIHAYIIRTDYQDNIFVGSA 310
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY N + E VF +M K+V+SWT M+ Y + ++AV + M+ PD
Sbjct: 311 LLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ T+ SV+S+CA L +L+ G + H A+ +GLI ++ ++N LI +Y KC ++ A ++FH
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
++ ++ +SWT+++ G ++ E + F M+ + + P+ VT V +LSAC+R G +
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490
Query: 518 GK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
G E RI D + ++D+ R GR++ A N N D W LL+
Sbjct: 491 GYHYFECMVKEHRITPIPDHY--TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLS 548
Query: 573 GYAERGQ---GALAEEFFRKM 590
G G A E K+
Sbjct: 549 SCRLNGNLEIGKWAAESLHKL 569
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 224/433 (51%), Gaps = 38/433 (8%)
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
P+ + + ++ T G + DLK + V H+ + ++ N L++ Y K G L +
Sbjct: 36 TNPETFLYNNLINTYGKLGDLKNARNVFDHIP----QPNLFSWNTLLSAYSKLGYLQDMQ 91
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELV 311
VFD MP D +SWN+++SGY NG + + ++ +M+++ V+ + +T S+++ S
Sbjct: 92 RVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNR 151
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG-----NR----------------- 349
G LGR++HG + K G+ + V +PL+ MY G NR
Sbjct: 152 GFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMI 211
Query: 350 ---------EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
E E++F M KD +SWTT+I+ + L +AV+ ++ M EG D+
Sbjct: 212 TGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQF 271
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T SVL+AC LD G ++H +RT I + + L+DMY KC+ + A VF ++
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
KNVISWT++++G N S EA+ F M N + P+ TL S++S+CA + +L G
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGA 391
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
+ H AL G+ + NAL+ +Y +CG ++ A F+ + RD +W L++GYA+ G
Sbjct: 392 QFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFG 451
Query: 579 QGALAEEFFRKMI 591
+ F M+
Sbjct: 452 KANETISLFETML 464
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 41/339 (12%)
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
L +P+ +++I+ +GD K R V ++ + ++ N L+ Y G ++
Sbjct: 34 TLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ----PNLFSWNTLLSAYSKLGYLQD 89
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP-DEITIASVLSACA 410
++VF M + DVVSW +++S Y G+ L ++V Y MM +GS+ + IT +++L +
Sbjct: 90 MQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSS 149
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV----- 465
G +DLG ++H + G SY+ + + L+DMY+K I+ A +F +IP+KN+
Sbjct: 150 NRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNT 209
Query: 466 --------------------------ISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
ISWT+II GL N EA+ F++M + +
Sbjct: 210 MITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMD 269
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T S+L+AC AL GK+IHA+ +R + F+ +ALLDMY +C +K A F
Sbjct: 270 QFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFR 329
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGN 596
++V +W +L GY GQ +EE R D + N
Sbjct: 330 KMRHKNVISWTAMLVGY---GQNGYSEEAVRIFCDMQRN 365
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 151/307 (49%), Gaps = 7/307 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG ++A+ M C+D+ +++ C DEG +H+ + +T +
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDN 304
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ +G+A L M+ K ++ +A VF KM +++ SW ++ GY + G+ +EA+ ++ M
Sbjct: 305 IFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM-Q 363
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ PD +T V+ +C + L+ G + H + G V V NALIT+Y KCG L
Sbjct: 364 RNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLE 423
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +F M RD +SW A++SGY + G+ + + LF M + PD +T V+SA
Sbjct: 424 HAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACS 483
Query: 310 LVGDEKLGREVHGYVIK---MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVV 365
G + G ++K + D C +I + G EE + ++M S D +
Sbjct: 484 RAGLVEKGYHYFECMVKEHRITPIPDHYTC--MIDLLSRAGRLEEAKNFINQMPFSPDAI 541
Query: 366 SWTTMIS 372
W T++S
Sbjct: 542 GWATLLS 548
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 244/453 (53%), Gaps = 17/453 (3%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF-WVGGVKPDVYTFPCVLRTCGGV 210
VF M RD+ +WN ++ Y K + EA+ ++ M W G+KP +F V V
Sbjct: 56 VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKW--GIKPSPVSFVNVFPAISSV 113
Query: 211 PDLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
D K ++ +++ G Y D+ VV++ I+MY + G L R VFD ++ WN
Sbjct: 114 GDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNT 173
Query: 269 MISGYFENGEYMKGLMLFIMM----REVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
MI G+ +N +++G+ LF+ +L D F++ + +S + +G LG+++H +
Sbjct: 174 MIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLG---LGQQMHAFT 230
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+K V+V N ++ MY + + +VF +M KDVVSW TMIS + + L ++ +
Sbjct: 231 MKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGL 290
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
M+ +G + D +T+ S+LSA + L N ++G + H +R G I + + + LIDMY
Sbjct: 291 MLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHG-IKFDGMDSYLIDMY 349
Query: 445 SKCKCIDKALEVF--HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVT 501
+K I + VF + I +++ +W ++I G N +A I FR M+ NL+PN+VT
Sbjct: 350 AKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVT 409
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSN 560
L SIL AC+ +G++ GK++H ++R + + F+ AL+DMY + G + A + F S+
Sbjct: 410 LASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSS 469
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
ER+ + ++ GY + G G A F M S
Sbjct: 470 ERNSVTYTTMILGYGQHGMGENALSLFHSMKKS 502
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 247/480 (51%), Gaps = 18/480 (3%)
Query: 130 VRLGNAF----------LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
++LGN + +SM+ + G L VF ++ WN +IGG+ + F E
Sbjct: 127 LKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLE 186
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
+ L+ + D TF L + L G+++H ++ V V+NA++
Sbjct: 187 GVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAIL 246
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY +C + + VF+ MP++D +SWN MISG+ +NG +GLML M++ D +
Sbjct: 247 VMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSV 306
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF--S 357
T++S++SA+ + + ++G++ H Y+I+ G D + + LI MY G ++VF +
Sbjct: 307 TVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRVFENN 365
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
++++D +W +I+ Y + L ++A T+++M + P+ +T+AS+L AC+ LG+++L
Sbjct: 366 NIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINL 425
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +LH +++R L I + L+DMYSK I+ A VF Q ++N +++T++ILG
Sbjct: 426 GKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQ 485
Query: 478 NNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGF 535
+ AL F M + ++P+++T V++LSAC+ G + G I R +
Sbjct: 486 HGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTA 545
Query: 536 LPNALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ DM R GR+ A+ Q + W LL G L EE ++++
Sbjct: 546 HYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLE 605
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 188/357 (52%), Gaps = 14/357 (3%)
Query: 249 VRARL------VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+R+RL VF M KRD I+WN M+S Y + Y++ + F +M + + P ++
Sbjct: 45 IRSRLSRLLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFV 104
Query: 303 SVISASELVGDEKLGREVHGYVIKMG--FSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+V A VGD K ++G ++K+G +++D+ V + I MY G + KVF
Sbjct: 105 NVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCL 164
Query: 361 SKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K W TMI + + + + Q M+ E ++ D++T S L+A + L L LG
Sbjct: 165 EKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQ 224
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H M+ + + + N ++ MYS+C + + EVF ++P+K+V+SW ++I G N
Sbjct: 225 QMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNG 284
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
E L+ +M +SVT+ S+LSA + + GK+ HA+ +R G+ FDG + +
Sbjct: 285 LDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDS 343
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
L+DMY + G ++ + F +N RD + WN ++ GY + G A FR M++
Sbjct: 344 YLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLE 400
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 211/415 (50%), Gaps = 15/415 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N LE +L +M+ + +D+ ++ + + G +H+ K + LSV +
Sbjct: 182 NSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTV 241
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA L M+ + + ++ VF KM ++D+ SWN +I G+ + G +E L L M G
Sbjct: 242 LNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGF 301
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D T +L + + + GK+ H ++IR G + D + + LI MY K G + ++
Sbjct: 302 I-ADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQ 359
Query: 253 LVFDG--MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF+ + RD+ +WNA+I+GY +NG + + F +M E + P+ +TL+S++ A
Sbjct: 360 RVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSS 419
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G LG+++HG I+ ++ V L+ MY G E VF++ ++ V++TTM
Sbjct: 420 LGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTM 479
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ-----LA 425
I Y + + A+ + M+ G PD IT +VLSAC+ G +D G+++ +
Sbjct: 480 ILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFK 539
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVIS-WTSIILGLRLN 478
++ Y +A DM + + +A E Q+ ++ +VI W S++ RL+
Sbjct: 540 IQPSTAHYCCVA----DMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLH 590
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 225/441 (51%), Gaps = 6/441 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-G 175
L + ++ + H SV N + V+ GD +A ++ + + +S+N +I G
Sbjct: 50 LREIQAQMLLH-SVEKPNFLIPKAVELGDFNYASFLLSVTEEPNHYSFNYMIRGLTNIWN 108
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ ALSLY+RM + G+KPD +T+ V CG ++ G+ VH + + G E D +
Sbjct: 109 DHEGALSLYRRMKY-SGLKPDNFTYNFVFIACGKREEIGVGRSVHSSLFKVGLERDDHIS 167
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
++LI MY KCG + AR VFD + R +SWN+MISGY E G + LF M E +
Sbjct: 168 HSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEAGRAKDAMDLFRKMEEEGFE 227
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD TL S++ A +GD GR + I + + LI MY G+ + +V
Sbjct: 228 PDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLITMYGKCGDLDSARRV 287
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F++M KD V+W MI+ Y + +A + + ME G PD T+++VLSAC +G L
Sbjct: 288 FNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 347
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++ A L I +A L+DMY KC I++AL VF +P KN +W ++I
Sbjct: 348 ELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKNEATWNAMITAY 407
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDG 534
+ EAL+ F +M + P+ VT + +LSAC G + G + H + G+
Sbjct: 408 AHQGHAKEALLLFDQM--PVPPSDVTFIGVLSACVHAGLVDQGCRYFHEMSSLFGLVPKI 465
Query: 535 FLPNALLDMYVRCGRMKPAWN 555
++D+ R G + AW
Sbjct: 466 EHYTNIIDLLSRAGLLDEAWE 486
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 187/362 (51%), Gaps = 5/362 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS + K + ++ + M+ K G +G+A VF ++ DR SWN +I GY++
Sbjct: 148 GRSVHSSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSE 207
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG +A+ L+++M G +PD T +L C + DL G+ + I
Sbjct: 208 AGRAKDAMDLFRKM-EEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTF 266
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + LITMY KCGDL AR VF+ M K+DR++WNAMI+ Y +NG+ + LF M +
Sbjct: 267 LGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTG 326
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD TLS+V+SA VG +LG+ + + ++ ++ V L+ MY G+ EE
Sbjct: 327 VSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEAL 386
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M K+ +W MI+ Y +A+ + M P ++T VLSAC G
Sbjct: 387 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQMPVP---PSDVTFIGVLSACVHAG 443
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+D G + H+++ GL+ I +ID+ S+ +D+A E + P K + I
Sbjct: 444 LVDQGCRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPGKPDEIMLAAI 503
Query: 473 LG 474
LG
Sbjct: 504 LG 505
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 181/417 (43%), Gaps = 50/417 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G + A+ M+E DE LV+++ C G L +
Sbjct: 199 NSMISGYSEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAIT 258
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
LS LG+ ++M+ K GDL A VF +M +D +WN +I Y++ G EA L
Sbjct: 259 KKIGLSTFLGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKL 318
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD T VL CG V L+ GK + H + ++ V L+ MY
Sbjct: 319 FFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYG 377
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF+ MP ++ +WNAMI+ Y G + L+LF M V P +T
Sbjct: 378 KCGHIEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQMP---VPPSDVTFIG 434
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA VH ++ G C +M FG + ++E
Sbjct: 435 VLSAC-----------VHAGLVDQG-------CRYFHEMSSLFG-------LVPKIE--- 466
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+T +I + L D E ++ ME PDEI +A++L AC ++ + K +
Sbjct: 467 --HYTNIIDLLSRAGLLD---EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 521
Query: 424 LAMR----TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI-----SWTSI 471
+ M +Y+I + L DM K D++ ++ + D+ V+ SW I
Sbjct: 522 MLMEMKEAKNAGNYVISSKVLADM----KMWDESAKMRALMRDRGVVKTPGCSWIEI 574
>gi|255552163|ref|XP_002517126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543761|gb|EEF45289.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 463
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 210/409 (51%), Gaps = 2/409 (0%)
Query: 114 GLYLHSVVSKTM-SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G H+ + KT S L L N +SM+ K A V R + +W LI G
Sbjct: 25 GRATHARIIKTFQSPLPPFLSNHLISMYSKLDLPNSAQLVLHLTPTRSVVTWTSLISGSV 84
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G F AL + M ++P+ +TFPC + + GK++H ++FG DV
Sbjct: 85 QNGHFSFALYHFFNM-RRDNIQPNDFTFPCAFKASASLLLPFVGKQIHAIAVKFGQINDV 143
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V + MY K G A+ +FD +P+R+ ++WNA IS G Y + F+ +R
Sbjct: 144 FVGCSAFDMYSKTGLKQDAQKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRA 203
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+PD T +A LGR++HG+VI+ GF VSV N LI Y
Sbjct: 204 GCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVRLA 263
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
E VF +ME+++ VSW +M++ E + +KA + EG P + ++SV+SACA L
Sbjct: 264 EMVFGKMENRNAVSWCSMVAACEQNGEEEKACLFFVEGRKEGIEPTDYMVSSVISACAGL 323
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+LG H LA++ L I + + L+DMY KC I+ + + FH++ ++N+++W ++I
Sbjct: 324 AGLELGRSFHALAVKACLEGDIFVGSALVDMYGKCGGIEDSEQAFHEMSERNLVTWNALI 383
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEI 521
G + A+ F++M + PN VTLV +LSAC R GA+ G EI
Sbjct: 384 GGYAHQGHAEMAVRLFKEMTTEVVPNYVTLVCVLSACGRGGAVELGMEI 432
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 201/401 (50%), Gaps = 14/401 (3%)
Query: 216 GKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G+ H +I+ F + N LI+MY K A+LV P R ++W ++ISG
Sbjct: 25 GRATHARIIKTFQSPLPPFLSNHLISMYSKLDLPNSAQLVLHLTPTRSVVTWTSLISGSV 84
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
+NG + L F MR + P+ T AS + +G+++H +K G +DV
Sbjct: 85 QNGHFSFALYHFFNMRRDNIQPNDFTFPCAFKASASLLLPFVGKQIHAIAVKFGQINDVF 144
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK---AVETYQMME 391
V MY G +++ +K+F + ++VV+W IS +VL + A + +
Sbjct: 145 VGCSAFDMYSKTGLKQDAQKLFDELPERNVVTWNAYIS---NAVLYGRYQNAAVAFVELR 201
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G PD T +ACA +DLG +LH +R+G + + N LID Y KCK +
Sbjct: 202 RAGCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVR 261
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF---RKMMLNLKPNSVTLVSILSA 508
A VF ++ ++N +SW S++ N +A +FF RK ++P + S++SA
Sbjct: 262 LAEMVFGKMENRNAVSWCSMVAACEQNGEEEKACLFFVEGRKE--GIEPTDYMVSSVISA 319
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
CA + L G+ HA A++ + D F+ +AL+DMY +CG ++ + F+ +ER++ W
Sbjct: 320 CAGLAGLELGRSFHALAVKACLEGDIFVGSALVDMYGKCGGIEDSEQAFHEMSERNLVTW 379
Query: 568 NILLTGYAERGQGALAEEFFRKM-IDSKGNWRKLMGLFRKC 607
N L+ GYA +G +A F++M + N+ L+ + C
Sbjct: 380 NALIGGYAHQGHAEMAVRLFKEMTTEVVPNYVTLVCVLSAC 420
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L G + A ++ D C + D G LH V +
Sbjct: 178 NAYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIR 237
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ SV + N + + K ++ A VFGKM +R+ SW ++ + G ++A
Sbjct: 238 SGFEKSVSVLNGLIDFYGKCKEVRLAEMVFGKMENRNAVSWCSMVAACEQNGEEEKAC-- 295
Query: 184 YQRMFWV----GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
+F+V G++P Y V+ C G+ L+ G+ H ++ E D+ V +AL+
Sbjct: 296 ---LFFVEGRKEGIEPTDYMVSSVISACAGLAGLELGRSFHALAVKACLEGDIFVGSALV 352
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KCG + + F M +R+ ++WNA+I GY G + LF M +V P+++
Sbjct: 353 DMYGKCGGIEDSEQAFHEMSERNLVTWNALIGGYAHQGHAEMAVRLFKEMTTEVV-PNYV 411
Query: 300 TLSSVISASELVGDEKLGREVHG 322
TL V+SA G +LG E+ G
Sbjct: 412 TLVCVLSACGRGGAVELGMEIFG 434
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 201/362 (55%), Gaps = 9/362 (2%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
F N+LI GYA A+ +Y+ W G PDVYTFP VL++C + ++
Sbjct: 75 FPCNLLISGYASGQLPWLAILIYR---WTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQF 131
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H ++ G D+ V N L+ +Y CGD V A VF+ M RD +SW +ISGY + G +
Sbjct: 132 HSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLF 191
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + LF+ M V+P+ T S++ A +G LG+ +HG V K + +++ VCN +
Sbjct: 192 NEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAV 248
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY+ + + K+F M KD++SWT+MI P ++++ + M+A G PD
Sbjct: 249 LDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDG 308
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ + SVLSACA LG LD G +H+ + + I TL+DMY+KC CID A +F+
Sbjct: 309 VILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNG 368
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
+P KN+ +W + I GL +N EAL F ++ + +PN VT +++ +AC G + G
Sbjct: 369 MPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEG 428
Query: 519 KE 520
++
Sbjct: 429 RK 430
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 199/400 (49%), Gaps = 10/400 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C G E HSV KT + + N + ++ GD A VF M RD
Sbjct: 115 VLKSCAKFSGIGEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRD 174
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SW LI GY K G F+EA+SL+ RM V+P+V TF +L CG + L GK +H
Sbjct: 175 VVSWTGLISGYVKTGLFNEAISLFLRM----NVEPNVGTFVSILGACGKLGRLNLGKGIH 230
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V + Y ++ V NA++ MY+KC + AR +FD MP++D ISW +MI G +
Sbjct: 231 GLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPR 290
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L LF M+ +PD + L+SV+SA +G GR VH Y+ DV + L+
Sbjct: 291 ESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLV 350
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G + +++F+ M SK++ +W I + +A++ ++ + G+ P+E+
Sbjct: 351 DMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEV 410
Query: 401 TIASVLSACACLGNLDLGIKL--HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T +V +AC G +D G K + L + ++D+ + + +A+E+
Sbjct: 411 TFLAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIK 470
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+P + ILG L++R+ + F + ML PN
Sbjct: 471 TMPMPPDVQ----ILGALLSSRNTYGNVGFTQEMLKSLPN 506
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 197/409 (48%), Gaps = 23/409 (5%)
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNA--------LITMYVKCGDLVRARLVFDGMPKRDR 263
DL+ K++H H++ + VV + ++ C L + P
Sbjct: 21 DLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSLSSFP---- 76
Query: 264 ISWNAMISGYFENG-EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
N +ISGY ++ L+ +R V PD T +V+ + R+ H
Sbjct: 77 --CNLLISGYASGQLPWLAILIYRWTVRNGFV-PDVYTFPAVLKSCAKFSGIGEVRQFHS 133
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+K G D+ V N L+ +Y G+ KVF M +DVVSWT +IS Y + L ++
Sbjct: 134 VSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNE 193
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M E P+ T S+L AC LG L+LG +H L + +++ N ++D
Sbjct: 194 AISLFLRMNVE---PNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLD 250
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MY KC + A ++F ++P+K++ISWTS+I GL E+L F +M + +P+ V
Sbjct: 251 MYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVI 310
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
L S+LSACA +G L CG+ +H + + +D + L+DMY +CG + A FN
Sbjct: 311 LTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMP 370
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+++ WN + G A G G A + F +++S + N + +F C
Sbjct: 371 SKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTAC 419
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
S ++L MQ D L +++ C D G ++H + V +G
Sbjct: 288 SPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGT 347
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ K G + A +F M +++ +WN IGG A G+ EAL ++ + G +
Sbjct: 348 TLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLV-ESGTR 406
Query: 195 PDVYTFPCVLRTC 207
P+ TF V C
Sbjct: 407 PNEVTFLAVFTAC 419
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 265/525 (50%), Gaps = 46/525 (8%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL-GHAWYVFGKMCDRDLFSWNVLIGG 170
D G +HS V K+ GNA +SM+ K G + A+ F ++ +D+ SWN +I G
Sbjct: 97 DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 156
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVI-RF 226
+++ F +EA L+ M G ++P+ T +L C + + + GKEVH HV+ R
Sbjct: 157 FSENKFTEEAFKLFHAML-KGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRM 215
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
DV V+N+L++ Y++ G + +A +F M RD +SWNA+I+GY NGE++K L LF
Sbjct: 216 ELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELF 275
Query: 287 IMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYL 344
+ + PD +TL SV+ A V + ++ + +HGY+I+ G +D SV N L+ Y
Sbjct: 276 SEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 335
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
+ + F + KD++SW ++ + S V M EG PD ITI +
Sbjct: 336 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 395
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLI---SYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ A + + + H ++R GL+ + + N ++D Y+KC + A+ +F +
Sbjct: 396 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 455
Query: 462 DK-NVISWTSIILG----------------------------LRL---NNRSFEALIFFR 489
+K NV++ S+I G +R+ N+ +AL F
Sbjct: 456 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 515
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
++ +KP+ VT++SIL ACA + ++ ++ H + +R D L A +DMY +CG
Sbjct: 516 ELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCG 574
Query: 549 RMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A+ F +S ++D+ + ++ G+A G G A F M++
Sbjct: 575 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLE 619
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 250/478 (52%), Gaps = 19/478 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD---EALSLYQRMF 188
L L+++ K G L + +FG+M RD WN+++ G A GF E + L++ M
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA--GFQSHEAEVMRLFRAMH 72
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
V KP+ T VL C + + GK VH +VI+ G E+ NALI+MY KCG +
Sbjct: 73 MVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLV 131
Query: 249 VR-ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI-- 305
A F+ + +D +SWNA+I+G+ EN + LF M + + P++ T++S++
Sbjct: 132 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 191
Query: 306 -SASELVGDEKLGREVHGYVI-KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ E + G+EVH +V+ +M +DVSV N L+ YL G E+ E +F M+S+D
Sbjct: 192 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 251
Query: 364 VVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+VSW +I+ Y + KA+E + + + E PD +T+ SVL ACA + NL + +H
Sbjct: 252 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 311
Query: 423 QLAMR-TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
+R GL + N L+ Y+KC AL+ F I K++ISW +I+ +
Sbjct: 312 GYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCE 371
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--- 537
+ M+ ++P+S+T+++I+ A + + KE H++++R G+ P
Sbjct: 372 THLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLG 431
Query: 538 NALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
N +LD Y +CG MK A N F S +R+V N +++GY A F M ++
Sbjct: 432 NGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSET 489
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 275/585 (47%), Gaps = 59/585 (10%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSHLS 129
N E+A K +M + I + + +++ +C E GY G +H V + M +
Sbjct: 160 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 219
Query: 130 -VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V + N+ +S +++ G + A ++F M RDL SWN +I GYA G + +AL L+
Sbjct: 220 DVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFI 279
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGD 247
+ +KPD T VL C V +L+ K +H ++IR G D V NAL++ Y KC
Sbjct: 280 SLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNY 339
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENG-EYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A F + ++D ISWNA++ + E+G E +L M+RE + PD +T+ ++I
Sbjct: 340 TQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREG-IRPDSITILTIIQ 398
Query: 307 ASELVGDEKLGREVHGYVIKMGF-----------------------------------SD 331
V K +E H Y I+ G
Sbjct: 399 YYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 458
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
+V CN +I Y++ + ++ +F+ M D+ +W M+ Y + PD+A+ + ++
Sbjct: 459 NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 518
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+G PD +TI S+L ACA + ++ + + H +R + + + IDMYSKC +
Sbjct: 519 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVF 577
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F P K+++ +T+++ G ++ EAL F M+ L +KP+ V + ++L AC+
Sbjct: 578 GAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACS 637
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSN--ERD 563
G + G +I ++ GF P ++D+ R GR+K A+ E +
Sbjct: 638 HAGLVDEGWKIFNSIEKV----HGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEAN 693
Query: 564 VSAWNILL----TGYAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ W LL T + +A+ F+ D+ GN+ + L+
Sbjct: 694 ANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLY 738
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 17/364 (4%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY--FENGEYMKGLM 284
GY++ + L+ +Y K G L +F M +RD + WN ++SG F++ E + +
Sbjct: 11 GYDS---LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHE-AEVMR 66
Query: 285 LFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
LF M V P+ +T++ V+ + E G+ VH YVIK G N LI MY
Sbjct: 67 LFRAMHMVNEAKPNSVTIAIVLPVCARL-REDAGKSVHSYVIKSGLESHTLAGNALISMY 125
Query: 344 LSFGNR-EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
G + F+R+E KDVVSW +I+ + + ++A + + M P+ TI
Sbjct: 126 AKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATI 185
Query: 403 ASVLSACACL---GNLDLGIKLH-QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
AS+L CA L G ++H + R L+ + + N+L+ Y + ++KA +F
Sbjct: 186 ASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFR 245
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGALM 516
+ ++++SW +II G N +AL F + + +KP+SVTLVS+L ACA + L
Sbjct: 246 NMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQ 305
Query: 517 CGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGY 574
K IH + +R G+ D + NALL Y +C + A F + +D+ +WN +L +
Sbjct: 306 VAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAF 365
Query: 575 AERG 578
E G
Sbjct: 366 TESG 369
>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 214/397 (53%), Gaps = 3/397 (0%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + + L M+ GDL A VFG + +D WN +I G K +E + L+ +M
Sbjct: 45 VFVQTSLLGMYSNCGDLESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMV- 103
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+ P +T+ +L CG + D + G+ +H VI AD+ + NAL+ MY CGD
Sbjct: 104 RHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTE 163
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISAS 308
VF+ + D +SWN+MISGY ENGE + LF+ + V L PD T ++VISA+
Sbjct: 164 TGFNVFNKIENPDLVSWNSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISAT 223
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G+ +H V+K+G V + L+ MYL G+ E E+VF+ +E KDVV WT
Sbjct: 224 SAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWT 283
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI + + A++ + MM EG D ++ LSACA L L+ G +H ++
Sbjct: 284 EMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKR 343
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G + I + +L+ MY+K + A +F Q+ + ++ W S++ G + + EA+I F
Sbjct: 344 GCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIF 403
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAH 524
K+++N +P+ VT +S+LSAC+ G + GK + +H
Sbjct: 404 AKILVNGQRPDQVTFLSLLSACSHSGLVEEGKLLWSH 440
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 206/403 (51%), Gaps = 3/403 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ P+ TF L+ C + D G +H ++ G+ DV V +L+ MY CGDL A
Sbjct: 5 GLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF + ++D + WN+MI G +N + +G++LF M + P T S +++A +
Sbjct: 65 NKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKL 124
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD + G+ +H VI + D+ + N L+ MY S G+ E G VF+++E+ D+VSW +MI
Sbjct: 125 GDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMI 184
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
S Y + A+ + Q++ PDE T A+V+SA + G LH ++ G
Sbjct: 185 SGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGS 244
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFR 489
+ I TL+ MY K I+ A +VF+ I K+V+ WT +I+G RL +F
Sbjct: 245 ERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSM 304
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
K +S L LSACA + L G+ IH ++ G + + +L+ MY + G
Sbjct: 305 MCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGD 364
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ A + F+ + D+ WN +L GY++ G A F K++
Sbjct: 365 LHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKIL 407
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 188/404 (46%), Gaps = 7/404 (1%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C W G +H+ V + L NA L M+ GD + VF K+ + DL SW
Sbjct: 127 CRW------GQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSW 180
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N +I GYA+ G +A++L+ ++ V KPD YTF V+ GK +H V+
Sbjct: 181 NSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVL 240
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ G E V + L++MY+K GD+ A VF+ + +D + W MI G+ G +
Sbjct: 241 KVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIK 300
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
LF MM D LS +SA + G +H +K G ++SVC L+ MY
Sbjct: 301 LFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYA 360
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ +FS++ + D+ W +M+ Y + ++A+ + + G PD++T S
Sbjct: 361 KNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLS 420
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE-VFHQIPDK 463
+LSAC+ G ++ G L + +I + ++ + S+ +D+A E + K
Sbjct: 421 LLSACSHSGLVEEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSK 480
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ + +L +N R+ + + + +L L+P +LS
Sbjct: 481 DHLELWRTLLSSCVNKRNLKIGVRAAEEILQLEPEDSATHILLS 524
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 2/204 (0%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M +G P+ T +S L AC L + +G +H +++ G + + + +L+ MYS C
Sbjct: 1 MGTQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGD 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
++ A +VF + K+ + W S+I G N + E ++ F KM+ + + P T IL+A
Sbjct: 61 LESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNA 120
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAW 567
C ++G G+ IHA + + V D L NALLDMY CG + +N FN E D+ +W
Sbjct: 121 CGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSW 180
Query: 568 NILLTGYAERGQGALAEEFFRKMI 591
N +++GYAE G+GA A F +++
Sbjct: 181 NSMISGYAENGEGADAMNLFLQLV 204
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E A+K M +D AL + C ++G +H+ K + +
Sbjct: 293 GGGESAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVC 352
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + M+ K GDL A +F ++ + DL WN ++GGY++ G +EA+ ++ ++ V G
Sbjct: 353 GSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKIL-VNGQ 411
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA-R 252
+PD TF +L C ++ GK + H+ + + ++++ + G L A
Sbjct: 412 RPDQVTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEE 471
Query: 253 LVFDGMPKRDRIS-WNAMIS 271
L+ +D + W ++S
Sbjct: 472 LIIKSTYSKDHLELWRTLLS 491
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 244/472 (51%), Gaps = 17/472 (3%)
Query: 133 GNAFLSMFVKFGDLGH---AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
N+ + +G + + A VF KM R + +WN +I Y++ + DE L+LY RM
Sbjct: 18 ANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMI- 76
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+KPD TF L+ C + DL G+ + + FGY DV VV++++ +Y K G +
Sbjct: 77 SEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMD 136
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+A++VFD M KRD +SW MI+G+ ++G + + ++ M++ + D + + +I A
Sbjct: 137 KAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACT 196
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+GD K G VHG++++ + D + LI MY G E +VF + K V+SW
Sbjct: 197 SLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGA 256
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS + + +K + + M+ G PD +++ S LSACA +GNL +G LH ++
Sbjct: 257 LISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRL 316
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + LIDMY+KC + A +F QI +++I W ++I ++ EAL F
Sbjct: 317 YLDK-VSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFL 375
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDM 543
KM N+ P+ T S+LSAC+ G + G+ + + + P+ ++D+
Sbjct: 376 KMKETNITPDHATFASLLSACSHSGLVEEGQ----YWFHVLIDKSKIQPSEKHYACMVDL 431
Query: 544 YVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
R G+++ A+ S + ++ W LL+G + E +K+++S
Sbjct: 432 LSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILES 483
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 199/378 (52%), Gaps = 8/378 (2%)
Query: 218 EVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
++H ++ G + D + + LI Y + +++ AR VF+ MP+R +WN+MI Y
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L L+ M + PD T + + A + D +G + + G+ DV V
Sbjct: 63 NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVV 122
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
+ ++ +Y G ++ + VF +M +DVVSWTTMI+ + S P A++ Y+ M+ E +
Sbjct: 123 SSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTE 182
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D + + ++ AC LG+ G+ +H +R + ++ +LIDMY+K ++ A V
Sbjct: 183 GDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRV 242
Query: 457 FHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG 513
F IP K+VISW ++I G N N++ +L+ + KP+ V+L+S LSACA++G
Sbjct: 243 FEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNS--GFKPDLVSLISSLSACAQVG 300
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLT 572
L GK +H H ++ + D AL+DMY +CG + A F+ E RD+ WN +++
Sbjct: 301 NLKVGKSLHGHIVK-RLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMIS 359
Query: 573 GYAERGQGALAEEFFRKM 590
Y G G A F KM
Sbjct: 360 SYGIHGDGIEALSLFLKM 377
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 162/334 (48%), Gaps = 12/334 (3%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A+ +MQ+ D +V L++ C GL +H + + ++ L + +
Sbjct: 169 AIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLID 228
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L A VF + + + SW LI G+A+ GF ++ L+ M G KPD+
Sbjct: 229 MYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEM-QNSGFKPDLV 287
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+ L C V +LK GK +H H+++ Y V ALI MY KCG L AR +FD +
Sbjct: 288 SLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVSGT-ALIDMYAKCGALTFARALFDQI 346
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD I WNAMIS Y +G+ ++ L LF+ M+E + PD T +S++SA G + G+
Sbjct: 347 EPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQ 406
Query: 319 EVHGYVI---KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-WTTMIS-C 373
+I K+ S+ C ++ + G EE ++ M K ++ W ++S C
Sbjct: 407 YWFHVLIDKSKIQPSEKHYAC--MVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGC 464
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
L + +++E S PD++ I ++S
Sbjct: 465 LNHKNLLIGEMVAKKILE---SNPDDLGIYVLVS 495
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L L MQ D +L++ + C G LH + K + +L
Sbjct: 264 NGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRL-YLDKVS 322
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A + M+ K G L A +F ++ RDL WN +I Y G EALSL+ +M
Sbjct: 323 GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKET-N 381
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ PD TF +L C ++ G+ HV + + + ++ + + G + A
Sbjct: 382 ITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEA 441
Query: 252 RLVFDGMPKRDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ + M + ++ W A++SG + + G M+ + E +PD + + ++S
Sbjct: 442 YQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILE--SNPDDLGIYVLVS 495
>gi|148906116|gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 193/378 (51%), Gaps = 35/378 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L+ LC + E +H+ + T + L+++VK G L A F M D
Sbjct: 17 LLHLCTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLNLYVKCGSLPDARLAFDNMTKGD 76
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+F WNV+IGGY K G EAL LY +M V PD YT+ VL C + L GK ++
Sbjct: 77 VFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIY 136
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I G E DV V NALI M++KCG + AR VFD M +R+ +SW AM+SGY + G
Sbjct: 137 DEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYAQGGFAD 196
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ L +F M+ V +++T++SV+ A + D + G+E+HGY+I+ G + V N LI
Sbjct: 197 EALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALI 256
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVS---------------------------------- 366
MY G+ +KVF +M +DVVS
Sbjct: 257 DMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKMQCAGLKIDVI 316
Query: 367 -WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W T+I+ Y + D+ +E +Q M+ G P+ ITIASVLSACA + L G ++H L
Sbjct: 317 TWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIHDLV 376
Query: 426 MRTGLISYIIIANTLIDM 443
R+ S I + N LIDM
Sbjct: 377 NRSECKSDICVGNALIDM 394
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 192/378 (50%), Gaps = 37/378 (9%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L C L K+VH H++ G V L+ +YVKCG L ARL FD M K D
Sbjct: 17 LLHLCTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLNLYVKCGSLPDARLAFDNMTKGD 76
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVH 321
WN MI GY ++GE + L L+ M++V +PD T SSV++A + G+ ++
Sbjct: 77 VFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIY 136
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+I G DV V N LI M++ G+ E+ +VF +M +++VSWT M+S Y D
Sbjct: 137 DEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYAQGGFAD 196
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A+ + M+ E + +T+ASVL ACA L +L G ++H +R GL I++ N LI
Sbjct: 197 EALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALI 256
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM---------- 491
DMY+KC I A +VF ++ ++V+SW I G N R E + FRKM
Sbjct: 257 DMYAKCGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKMQCAGLKIDVI 316
Query: 492 --------------------------MLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
+ +KPNS+T+ S+LSACA + AL GK IH
Sbjct: 317 TWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIHDLV 376
Query: 526 LRIGVAFDGFLPNALLDM 543
R D + NAL+DM
Sbjct: 377 NRSECKSDICVGNALIDM 394
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 152/277 (54%), Gaps = 3/277 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
++VH +++ G SV L+ +Y+ G+ + F M DV W MI Y
Sbjct: 30 AKQVHAHMLLTGILRIPSVETKLLNLYVKCGSLPDARLAFDNMTKGDVFPWNVMIGGYVK 89
Query: 377 SVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+A+E Y QM + + PD T +SVL+ACA L +L G ++ + G +I
Sbjct: 90 HGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIYDEIISKGCEMDVI 149
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N LI+M+ KC I+ A VF ++ ++N++SWT+++ G + EAL F +M +
Sbjct: 150 VENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYAQGGFADEALRMFYEMQGED 209
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+K N VT+ S+L ACA++ L GKEIH + +R G+ + NAL+DMY +CG + A
Sbjct: 210 VKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQ 269
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +RDV +WN+ + GYA+ G+ E FRKM
Sbjct: 270 KVFDKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKM 306
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 157/313 (50%), Gaps = 51/313 (16%)
Query: 73 NGSLEQALKYLDSMQELNICVDED--------ALVNLVRLCEWKRGYDEGLYLHSVVSKT 124
+G +AL+ MQ+++ ++ A L L E K YDE ++SK
Sbjct: 90 HGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLASLSEGKLIYDE------IISKG 143
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
+ V + NA ++MF+K G + A VF KMC+R+L SW ++ GYA+ GF DEAL ++
Sbjct: 144 -CEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSGYAQGGFADEALRMF 202
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M VK + T VL C + DL++GKE+H ++IR G + + V NALI MY K
Sbjct: 203 YEM-QGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAK 261
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR------EVL----- 293
CG + A+ VFD M +RD +SWN I+GY +NG + + + LF M+ +V+
Sbjct: 262 CGSIGSAQKVFDKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKMQCAGLKIDVITWNTL 321
Query: 294 ------------------------VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
V P+ +T++SV+SA V + G+ +H V +
Sbjct: 322 ITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIHDLVNRSEC 381
Query: 330 SDDVSVCNPLIKM 342
D+ V N LI M
Sbjct: 382 KSDICVGNALIDM 394
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R L+ P S L+ + C + L K++HAH L G+ + LL++YV+C
Sbjct: 3 LRVFALHCHPRSSLLLHL---CTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLNLYVKC 59
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
G + A F N + DV WN+++ GY + G+ A E + +M
Sbjct: 60 GSLPDARLAFDNMTKGDVFPWNVMIGGYVKHGETREALELYHQM 103
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 254/508 (50%), Gaps = 10/508 (1%)
Query: 90 NICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM---SHLSVRLGNAFLSMFVKFGDL 146
N C E +L+ L+R +R + +H V K L+V L N + + K D
Sbjct: 56 NCCYSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVML-NQLVIAYSKCSDF 114
Query: 147 GHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRT 206
G A VF ++ + +FSW VL+ G + GF+ + + + + + PD Y ++
Sbjct: 115 GSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCD-IVPDEYALSAAIQA 173
Query: 207 CGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
C GV + G+ VH VI G+ + V +L+ MY K G + + VF+ + R+++SW
Sbjct: 174 CIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSW 233
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK 326
NAMISG+ NG Y + F+ M + P+ SV A +GD + GR ++ +
Sbjct: 234 NAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFE 293
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS--WTTMISCYEGSVLPDKAV 384
+G ++ V LI M+ G E VF S V+ W MIS + S ++A+
Sbjct: 294 IGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAM 353
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ M D T S L++ A + +L+ +LH + ++G I + + N L+D Y
Sbjct: 354 LLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG-VSLCNALMDAY 412
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLV 503
+KC +D ++F + N ISWT+++ ++ +AL F +M + +PN VT
Sbjct: 413 AKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFS 472
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NER 562
+L++CA + +L G+++H+ + G A D + + L+DMY +CG ++ A F S +
Sbjct: 473 GVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDP 532
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM 590
DV +W +++GYA+ G A E FRKM
Sbjct: 533 DVISWTAMISGYAQHGMAKDALELFRKM 560
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 266/526 (50%), Gaps = 10/526 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
NG + Y + +I DE AL ++ C G +H+ V+++ S +
Sbjct: 142 NGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTF- 200
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ + L M+ K G +G + VF + +R+ SWN +I G+ G + EA + + RM
Sbjct: 201 VNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLG-E 259
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
++P+V F V + G + D+++G+ ++ G ++++ V ALI M+ KCG + +
Sbjct: 260 EIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTES 319
Query: 252 RLVF--DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
VF + + WNAMISG+ +G + ++LF+ M + + D T S +++
Sbjct: 320 WSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIA 379
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + +++HG + K G S VS+CN L+ Y G + K+F E + +SWTT
Sbjct: 380 DMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTT 438
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+++ Y S + A+ + M G P+++T + VL++CA L +L+ G ++H L +TG
Sbjct: 439 LVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTG 498
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + LIDMY+KC + A++VF + D +VISWT++I G + + +AL FR
Sbjct: 499 FARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFR 558
Query: 490 KMMLNL-KPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRC 547
KM L L PNS T + +L AC+ G + G + H R G+ + ++D+ R
Sbjct: 559 KMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRV 618
Query: 548 GRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
GR+ AW E D W+ LL G LA+ +K++
Sbjct: 619 GRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVL 664
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 209/407 (51%), Gaps = 13/407 (3%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM---CDRDLFSWNVLI 168
++G Y++ + + ++ +G A + MF K G + +W VF C +L WN +I
Sbjct: 282 EKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNL-PWNAMI 340
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G+ +G +EA+ L+ RM +K DVYT+ L + + L+ K++H + + G
Sbjct: 341 SGFTISGHGEEAMLLFLRMCQ-NNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG- 398
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
V + NAL+ Y KCG+L R +FD + ++ISW +++ Y ++ E+ L +F
Sbjct: 399 SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQ 458
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MRE+ P+ +T S V+++ + + G++VH K GF+ D V + LI MY G+
Sbjct: 459 MREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGS 518
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ KVF ++ DV+SWT MIS Y + A+E ++ ME P+ T +L A
Sbjct: 519 VRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFA 578
Query: 409 CACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKN 464
C+ G +D G++ H + R GL+ I ++D+ + + +A + ++ PD+
Sbjct: 579 CSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEK 638
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
V W++++ R++ A I +K +L+ P+ + +LS R
Sbjct: 639 V--WSTLLGACRVHGNIQLAKIAAQK-VLSYNPDDFAALVLLSNTYR 682
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 260/532 (48%), Gaps = 12/532 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L +G+ +A + L +M + + AL + +R R G L S+ K
Sbjct: 62 NALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALK 121
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V +A L ++ K G + A VF M +R+ SWN LI GY ++G AL L
Sbjct: 122 SGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALEL 181
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD TF +L G P ++H ++++G + V+NA IT Y
Sbjct: 182 FLEM-EREGLAPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 244 KCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTL 301
+CG L +R +FDG+ RD ISWNAM+ Y NG + + F+ MM+E V PD +
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 302 SSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR---EEGEKVFS 357
+S+IS+ SE D+ GR +HG VIK VCN LI MY + E+ K F+
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ KD VSW +M++ Y L A++ ++ M +E DE ++ L + + L L L
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H L + +G S ++++LI MYSK ID A + F + + + W ++I G
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGF 535
+ ++ I F +M+ P + +T V ++++C+ G + G EI + + GV
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRME 539
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+D+Y R G++ A +S E D W LL G LA +
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASD 591
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 245/473 (51%), Gaps = 14/473 (2%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A VF ++ RD SWN L+ A +G EA L + M G+ + + LR
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH-AQGLASNTFALGSALR 101
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+ G ++ ++ G +V +AL+ +Y KCG + AR VFDGMP+R+ +S
Sbjct: 102 SAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVS 161
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGYV 324
WNA+I+GY E+G+ L LF+ M + PD T +S+++A E G L ++HG +
Sbjct: 162 WNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE--GPSCFLMHQLHGKI 219
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKA 383
+K G + ++V N I Y G+ ++ ++F + + +D++SW M+ Y + + D+A
Sbjct: 220 VKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEA 279
Query: 384 VETY-QMMEAEGSMPDEITIASVLSACACLGNLD-LGIKLHQLAMRTGLISYIIIANTLI 441
++ + +MM+ G PD + S++S+C+ G+ D G +H L +++ L + N LI
Sbjct: 280 MKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALI 339
Query: 442 DMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
MY++ ++ A + F+ + K+ +SW S++ G + S +AL FFR M N++
Sbjct: 340 AMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ + L + + + L GK+IH + G A + F+ ++L+ MY + G + A F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459
Query: 558 NSNERDVSA-WNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKC 607
++ S WN ++ GYA+ GQ + F +M+ K + +GL C
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSC 512
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 21/370 (5%)
Query: 236 NALITMYVKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
N L+T Y + L AR VFD +P+RD +SWNA+++ +G + + L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ + L S + ++ + +G ++ +K G +++V + L+ +Y G +
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC---A 410
+VF M ++ VSW +I+ Y S A+E + ME EG PDE T AS+L+A +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWT 469
C L +LH ++ G + + N I YS+C + + +F I D +++ISW
Sbjct: 209 CF----LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWN 264
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGA-LMCGKEIHAHAL 526
+++ N EA+ FF +MM + P+ + SI+S+C+ G G+ I H L
Sbjct: 265 AMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI--HGL 322
Query: 527 RIGVAFDGFLP--NALLDMYVRCGR---MKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
I A +G P NAL+ MY R M+ A+ FNS +D +WN +LTGY++ G
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLS 382
Query: 581 ALAEEFFRKM 590
A A +FFR M
Sbjct: 383 ADALKFFRCM 392
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 269/521 (51%), Gaps = 23/521 (4%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYV 152
D A+ ++++ C G LH + + + H+S + A L+M+ K G L + +
Sbjct: 23 DYQAVASILKSCAGLSAIKWGRALHGSIVR-IGHVSCHAVSKALLNMYAKCGALDESKKL 81
Query: 153 FGKM--C-DRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
FG++ C DRD WN+L+ GYA + +D E L L++ M KP T VL C
Sbjct: 82 FGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCA 141
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR-ARLVFDGMPKRDRISWN 267
+ D+ G+ V+ + I+ G + NAL++MY KCG + + A FD + ++D +SWN
Sbjct: 142 RLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWN 201
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL----GREVHGY 323
A+ISG+ EN LF M + + P++ TL++++ DE + G+E+HGY
Sbjct: 202 AIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASF-DEYIAYWFGKEIHGY 260
Query: 324 VIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
V++ DV V N L+ YL G EE E +F RME +D+VSW +I+ Y + K
Sbjct: 261 VLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSK 320
Query: 383 AVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTL 440
A+E + +++ + PD +T+ ++ ACA NL +G +H +R L+ + N L
Sbjct: 321 ALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNAL 380
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ Y+KC I+ A E F I +++ISW S++ L + + L R M+ P+S
Sbjct: 381 VSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTPDS 440
Query: 500 VTLVSILSACARIGALMCGKEIHAHALR---IGVAFD--GFLPNALLDMYVRCGRMKPAW 554
VT++S++ C + KE H++++R + FD + NA+LD Y +CG ++ A
Sbjct: 441 VTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYAS 500
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F S R++ + +++GY G A F +M S
Sbjct: 501 KVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSS 541
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 275/594 (46%), Gaps = 57/594 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE------GLYL 117
N+ ++ N +E A + SM + I + L N++ +C +DE G +
Sbjct: 201 NAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCA---SFDEYIAYWFGKEI 257
Query: 118 HSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
H V + L+ V + NA +S +++ G + A +F +M RDL SWN +I GYA G
Sbjct: 258 HGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGE 317
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVV 235
+ +AL L+ + + ++PD T C++ C +L GK +H +V+R D V
Sbjct: 318 WSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVG 377
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NAL++ Y KC D+ A F + +RD ISWN+M+ E+G L L M
Sbjct: 378 NALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTT 437
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKM-----GFSDDVSVCNPLIKMYLSFGNRE 350
PD +T+ SV+ V E +E H Y I+ F + ++ N ++ Y GN E
Sbjct: 438 PDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIE 497
Query: 351 EGEKV--------------------------------FSRMESKDVVSWTTMISCYEGSV 378
KV F+RM S D+ W M+ Y +
Sbjct: 498 YASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAEND 557
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+A+ + ++A G PD +TI S+L ACA + ++ L + H A+R+ + +
Sbjct: 558 CSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRS-CFGDLHLDG 616
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKP 497
L D+Y+KC I A ++F IP+K++I +T++I G ++ EAL FF + L +KP
Sbjct: 617 ALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKP 676
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ V + ++LSAC+ G + G I ++ G+ + ++D+ R GR+ A++
Sbjct: 677 DHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSM 736
Query: 557 FNSN--ERDVSAWNILLTGYAERGQGAL----AEEFFRKMIDSKGNWRKLMGLF 604
E + + W LL + L A+ F+ ++ GN+ L L+
Sbjct: 737 VTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIGNYVVLSNLY 790
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 204/415 (49%), Gaps = 14/415 (3%)
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G + D +L++C G+ +K G+ +H ++R G+ + V AL+ MY KCG L
Sbjct: 18 GDFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDE 77
Query: 251 ARLVFDGMPK---RDRISWNAMISGYFENGEY-MKGLMLFIMMREV-LVDPDFMTLSSVI 305
++ +F + RD I WN ++SGY + Y + L LF M P +T + V+
Sbjct: 78 SKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVL 137
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDV 364
+GD +GR V+ Y IK G N L+ MY G ++ F ++ KDV
Sbjct: 138 PVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDV 197
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD---LGIKL 421
VSW +IS + + L + A + M P+ T+A++L CA G ++
Sbjct: 198 VSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEI 257
Query: 422 HQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
H +R L++ + + N L+ Y + +++A +F ++ ++++SW +II G N
Sbjct: 258 HGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGE 317
Query: 481 SFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFLP 537
+AL F +++ ++P+SVTL+ I+ ACA+ L GK IH + LR + D +
Sbjct: 318 WSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVG 377
Query: 538 NALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
NAL+ Y +C ++ A+ F + RD+ +WN +L E G E R M+
Sbjct: 378 NALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWML 432
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 214/489 (43%), Gaps = 48/489 (9%)
Query: 73 NGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSV 130
NG +AL+ + L+ I D L+ ++ C R G +H V+ +
Sbjct: 315 NGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDT 374
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+GNA +S + K D+ A+ F + RDL SWN ++ ++G+ L L + M
Sbjct: 375 SVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWML-S 433
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-----GYEADVDVVNALITMYVKC 245
G PD T V+ C V + KE H + IR ++ + + NA++ Y KC
Sbjct: 434 EGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKC 493
Query: 246 GD--------------------------------LVRARLVFDGMPKRDRISWNAMISGY 273
G+ L A + F+ MP D WN M+ Y
Sbjct: 494 GNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLY 553
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
EN + L LF ++ + PD +T+ S++ A + +L ++ HGY I+ F D+
Sbjct: 554 AENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCFG-DL 612
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ L +Y G+ K+F + +KD++ +T MI Y + +A+ T+ M
Sbjct: 613 HLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIEL 672
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G PD + I +VLSAC+ G +D G+ + + + G+ + + ++D+ ++ ID
Sbjct: 673 GIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDD 732
Query: 453 ALEVFHQIP-DKNVISWTSIILGLRLNNR----SFEALIFFRKMMLNLKPNSVTLVSILS 507
A + +P + N W +++ R ++ F A F+ N+ N V L ++ +
Sbjct: 733 AFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIG-NYVVLSNLYA 791
Query: 508 ACARIGALM 516
A AR +M
Sbjct: 792 ADARWDGVM 800
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 29/253 (11%)
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W TMIS G D YQ +AS+L +CA L + G LH
Sbjct: 8 AWNTMISDCNGDFRQD-----YQ------------AVASILKSCAGLSAIKWGRALHGSI 50
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP---DKNVISWTSIILGLRLNNRSF 482
+R G +S ++ L++MY+KC +D++ ++F +I D++ I W +I+L +R +
Sbjct: 51 VRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFW-NILLSGYAGSRVY 109
Query: 483 EA--LIFFRKMM-LNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+A L FR+M N KP+SVT +L CAR+G + G+ ++ +A++ G+ N
Sbjct: 110 DAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGN 169
Query: 539 ALLDMYVRCGRM-KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--K 594
AL+ MY +CG + + A+ F+S +E+DV +WN +++G+AE A F M+ K
Sbjct: 170 ALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIK 229
Query: 595 GNWRKLMGLFRKC 607
N+ L + C
Sbjct: 230 PNYTTLANILPVC 242
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 244/458 (53%), Gaps = 12/458 (2%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
L+ VK G L A +F +M +++ +W ++ GY + G + AL+++ M GV P+
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV-ESGVAPN 113
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+ L C + L+ G++VH +R G+ D + + LI MY +CG L A+ VFD
Sbjct: 114 DFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFD 173
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M D + + ++IS + NGE+ I M + + P+ T++++++A V L
Sbjct: 174 RMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 317 GREVHGYVI-KMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G+++HGY+I K+G S V LI Y G + + VF + K+VVSW +M+ Y
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
++A++ + M +EG P+E ++ VL AC +G LG +LH A++ LI+ I
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDI 346
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++N L+ MY + +++ + ++I + +++SWT+ I N +A+ +M
Sbjct: 347 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 406
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
PN S+LS+CA + +L G + H AL++G + NAL++MY +CG+M A
Sbjct: 407 GFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSA 466
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + DV++WN L+ G+A+ G A E F KM
Sbjct: 467 RLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 504
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 240/510 (47%), Gaps = 22/510 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E AL M E + ++ A + C G +HS+ + +
Sbjct: 92 NGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWI 151
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+ + M+ + G L A VF +M D+ + LI + + G F+ A +M G
Sbjct: 152 GSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQML-KQG 210
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEAD-VDVVNALITMYVKCGDLVR 250
+KP+ +T +L C V G+++H ++I+ G + V ALI Y + G+
Sbjct: 211 LKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKL 266
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+ VFD + ++ +SW +M+ Y +G + L +F M VDP+ LS V+ A
Sbjct: 267 AKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS 326
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G LGR++H IK D+ V N L+ MY G EE E + +++E+ D+VSWTT
Sbjct: 327 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + +KA+ M +EG P+ +SVLS+CA + +LD G++ H LA++ G
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I N LI+MYSKC + A F + +V SW S+I G + + +AL F K
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK 503
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMY 544
M N +KP+ T + +L C G + G+ R+ + F P ++DM
Sbjct: 504 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF----FRLMIDQYSFTPAPSHYACMIDML 559
Query: 545 VRCGRMKPAWNQFNSN--ERDVSAWNILLT 572
R GR A N E D W LL
Sbjct: 560 GRNGRFDEALRMINDMPFEPDALIWKTLLA 589
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 13/267 (4%)
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D V C L ++ S G + +F RM K+VV+WT+++S Y + P+ A+ + M
Sbjct: 47 DVVLECKRLNRLVKS-GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
G P++ + L ACA LG L G ++H LA+R G I + LI+MYS+C +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILS 507
A EVF ++ +V+ +TS+I N + EALI K LKPN T+ +IL+
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ--GLKPNEHTMTTILT 223
Query: 508 ACARIGALMCGKEIHAHAL-RIGVAFDG-FLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
AC R+ G++IH + + +IG+ + AL+D Y R G K A F+S + ++V
Sbjct: 224 ACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMI 591
+W ++ Y G+ A + F MI
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMI 306
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 267/593 (45%), Gaps = 57/593 (9%)
Query: 9 TSQTPLRQNLRNPKTRIPETSFYFKPKTRHFSSKN--AQSVQVLNTQNTSSIATKNPNSR 66
+S P+R + P I + K HF +++++ S + TK +S
Sbjct: 47 SSCLPIRISA-TPTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSV 105
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L + SL K ++ N+ VDE + LV L EG V TM
Sbjct: 106 LQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEG----RRVFDTME 161
Query: 127 HLSVRLGNAFLSMFVKFGDLGH--------------------AWYVFGKMCDRDLFSWNV 166
+V L N +S + K GD A +F K+CDRD+ SWN
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I GY G + L +Y++M ++G + D+ T VL C L GK VH I+
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
+E ++ N L+ MY KCGDL A VF+ M +R+ +SW +MI+GY +G + L
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + V D + +S++ A G G++VH Y+ ++ VCN L+ MY
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ + VFS M KD++SW TMI + PD T+A +L
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGELK---------------------PDSRTMACIL 439
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA L L+ G ++H +R G S +AN L+D+Y KC + A +F IP K+++
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE---IH 522
SWT +I G ++ EA+ F +M ++P+ V+ +SIL AC+ G L G I
Sbjct: 500 SWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 559
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTG 573
+ I + + ++D+ R G + A+ + D + W LL G
Sbjct: 560 KNDFNIEPKLEHYA--CMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 224/488 (45%), Gaps = 75/488 (15%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DR + +N I + + G + A+ L + + + T+ VL+ C G L GK
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMEL---VCMCQKSELETKTYSSVLQLCAGSKSLTDGK 119
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK----------------- 260
+VH + D + L+++Y CGDL R VFD M K
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 261 ----------------------------------RDRISWNAMISGYFENGEYMKGLMLF 286
RD ISWN+MISGY NG +GL ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + +D D T+ SV+ G LG+ VH IK F ++ N L+ MY
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ + +VF +M ++VVSWT+MI+ Y D A+ Q ME EG D + S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA G+LD G +H + S + + N L+DMY+KC +D A VF + K++I
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDII 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
SW + M+ LKP+S T+ IL ACA + AL GKEIH + L
Sbjct: 420 SWNT--------------------MIGELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R G + D + NAL+D+YV+CG + A F+ +D+ +W ++++GY G G A
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519
Query: 586 FFRKMIDS 593
F +M D+
Sbjct: 520 TFNEMRDA 527
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 237/444 (53%), Gaps = 10/444 (2%)
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+ K+G ++AL L + + +L+TC V RG++ H HV++ G E
Sbjct: 34 FCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLET 93
Query: 231 DVDVVNALITMYVKCG-DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D V N+L+++Y K G D + R VFDG+ +D +SW +MI+GY G+ + LF M
Sbjct: 94 DRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDM 153
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ ++P+ TLS+VI A +G+ LG+ HG V++ GF + + + LI MY
Sbjct: 154 LDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVS 213
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSA 408
+ ++F + D V WTT+IS + + L ++A+ + + A PD T SVL+A
Sbjct: 214 SDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTA 273
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C LG L G ++H + G ++ ++L+DMY KC ++K+ +F ++ ++N +SW
Sbjct: 274 CGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSW 333
Query: 469 TSIILGLRLNNRSFE-ALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
S +L + +N +E A+ FR+M + + + +++ ACA + A+ GKEIH +R
Sbjct: 334 -SALLAVYCHNGDYEKAVNLFREMK---EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIR 389
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
G D + +AL+D+Y +CG + A+ F+ R++ WN ++ G+A+ G +A +
Sbjct: 390 KGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQI 449
Query: 587 FRKMIDS--KGNWRKLMGLFRKCQ 608
F MI K + +GL C
Sbjct: 450 FEAMIKEGIKPDCISFIGLLFACS 473
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 277/544 (50%), Gaps = 29/544 (5%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDAL-VNLVRLCEWKRGYDEGLYLHSVVSK 123
S++ + C +G L AL L+S+ + +++ L +L++ C + G H+ V K
Sbjct: 29 SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVK 88
Query: 124 TMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ +GN+ LS++ K G D VF + +D+ SW +I GY + G A+
Sbjct: 89 SGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIE 148
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M G++P+ +T V++ C + +L GK H V+R G++++ ++++LI MY
Sbjct: 149 LFWDML-DSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMY 207
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM-MREVLVDPDFMTL 301
+ AR +FD + + D + W +IS + N Y + L F + R + PD T
Sbjct: 208 GRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTF 267
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV++A +G + G E+H VI GFS +V + L+ MY G E+ +++F RM +
Sbjct: 268 GSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSN 327
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
++ VSW+ +++ Y + +KAV ++ M+ D + +V+ ACA L + G ++
Sbjct: 328 RNSVSWSALLAVYCHNGDYEKAVNLFREMKE----VDLYSFGTVIRACAGLAAVTPGKEI 383
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R G +I+ + L+D+Y+KC CI+ A VF ++P +N+I+W S+I G N S
Sbjct: 384 HCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSS 443
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIGA---------LMCGKEIHAHALRIGVA 531
A+ F M+ +KP+ ++ + +L AC+ G LM GK + ++ GV
Sbjct: 444 GIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGK----YGIKPGVE 499
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAER-GQGALAEEFFR 588
N ++D+ R G ++ A N + E D S W +LL A AE +
Sbjct: 500 H----YNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAK 555
Query: 589 KMID 592
K+++
Sbjct: 556 KLME 559
>gi|255579533|ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529857|gb|EEF31789.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 237/463 (51%), Gaps = 14/463 (3%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL-YQRMFWVGGVK 194
+S K G + +A +F M RD+ WN LI G ++G +E + L Y R GV+
Sbjct: 138 LVSACAKLGHVDYACVLFDVMPQRDVVVWNALITGCMESG--NEEIGLNYFRDMCRSGVR 195
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D Y+ VL C V + G +VH VI+ G + V+NALITMY C +++ LV
Sbjct: 196 HDNYSLASVLSGCKLVM-VNFGMQVHSLVIKSGSLVEPSVINALITMYFNCENVLDGYLV 254
Query: 255 FDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ RD+I++N MI G G + L++ M + P+ +T S++S+
Sbjct: 255 FEEAEDSVRDQITYNVMIDGLVSVGRIEEALIICRKMLGSCLRPNELTFVSLMSS---CL 311
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++G + H IKMGF S+ N I MY S + KVF R+E KD VSW TMIS
Sbjct: 312 HAEIGYQFHAQAIKMGFEASTSLSNATITMYSSCKDLHAARKVFERLERKDPVSWNTMIS 371
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+ Y M G+ PDE T S+L++ L +++ +H L R LIS
Sbjct: 372 SYTQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSELLETVEM---IHALVFRNSLIS 428
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
I ++N L YSK ++++ ++F + +++ISW SII G LN L F ++
Sbjct: 429 NIQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQ 488
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
M K N TL ILS CA I AL GK++H + +R G + + L N L+ Y +CG +
Sbjct: 489 MSEFKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLID 548
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ F + ++D +WN L++ YA+ G+G A F M S
Sbjct: 549 WSSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAMQHS 591
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 229/443 (51%), Gaps = 12/443 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G+ E L Y M + D +L +++ C+ + G+ +HS+V K+ S + +
Sbjct: 176 SGNEEIGLNYFRDMCRSGVRHDNYSLASVLSGCKLVM-VNFGMQVHSLVIKSGSLVEPSV 234
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
NA ++M+ ++ + VF + D RD ++NV+I G G +EAL + ++M
Sbjct: 235 INALITMYFNCENVLDGYLVFEEAEDSVRDQITYNVMIDGLVSVGRIEEALIICRKMLG- 293
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
++P+ TF ++ +C + G + H I+ G+EA + NA ITMY C DL
Sbjct: 294 SCLRPNELTFVSLMSSC---LHAEIGYQFHAQAIKMGFEASTSLSNATITMYSSCKDLHA 350
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ + ++D +SWN MIS Y + ++ ++ MR +PD T S++++SEL
Sbjct: 351 ARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSEL 410
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ ++ +H V + ++ V N L Y GN E+ ++FS M +D++SW ++
Sbjct: 411 LETVEM---IHALVFRNSLISNIQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSI 467
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + LP +E + ++ +E T+ +LS CA + L G ++H MR+G
Sbjct: 468 ISGFLLNGLPLLGLEKFSELQMSEFKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGF 527
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S + + N LI Y+KC ID + VF + K+ +SW ++I + + EA+ F
Sbjct: 528 SSEVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEA 587
Query: 491 MMLN--LKPNSVTLVSILSACAR 511
M + ++P+ T +LSAC+
Sbjct: 588 MQHSSEVQPDDATFKIVLSACSH 610
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 200/432 (46%), Gaps = 48/432 (11%)
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
FD+ SLY + KPD YT L C + D G ++H + I+ + V
Sbjct: 51 LFDKIRSLYYYL------KPDHYTLSTTLTACANLCDTTFGNKLHAYAIKSSLKTYTHVA 104
Query: 236 NALITMYVKC-------------------------------GDLVRARLVFDGMPKRDRI 264
N L+++Y K G + A ++FD MP+RD +
Sbjct: 105 NTLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKLGHVDYACVLFDVMPQRDVV 164
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WNA+I+G E+G GL F M V D +L+SV+S +LV G +VH V
Sbjct: 165 VWNALITGCMESGNEEIGLNYFRDMCRSGVRHDNYSLASVLSGCKLVM-VNFGMQVHSLV 223
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES--KDVVSWTTMISCYEGSVLPDK 382
IK G + SV N LI MY + N +G VF E +D +++ MI ++
Sbjct: 224 IKSGSLVEPSVINALITMYFNCENVLDGYLVFEEAEDSVRDQITYNVMIDGLVSVGRIEE 283
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M P+E+T S++S+C + ++G + H A++ G + ++N I
Sbjct: 284 ALIICRKMLGSCLRPNELTFVSLMSSCL---HAEIGYQFHAQAIKMGFEASTSLSNATIT 340
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVT 501
MYS CK + A +VF ++ K+ +SW ++I N A++ + +M +P+ T
Sbjct: 341 MYSSCKDLHAARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTEPDEFT 400
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE 561
S+L++ + + + IHA R + + + NAL Y + G M+ ++ F+
Sbjct: 401 FGSLLASSELLETV---EMIHALVFRNSLISNIQVSNALASAYSKHGNMEQSYQIFSDMS 457
Query: 562 -RDVSAWNILLT 572
RD+ +WN +++
Sbjct: 458 FRDLISWNSIIS 469
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 18/356 (5%)
Query: 74 GSLEQALKYLDSMQELNICV--DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
G +E+AL M L C+ +E V+L+ C + G H+ K S
Sbjct: 279 GRIEEALIICRKM--LGSCLRPNELTFVSLMSSCLHA---EIGYQFHAQAIKMGFEASTS 333
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NA ++M+ DL A VF ++ +D SWN +I Y + F A+ Y M G
Sbjct: 334 LSNATITMYSSCKDLHAARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTG 393
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+PD +TF +L + L+ + +H V R +++ V NAL + Y K G++ ++
Sbjct: 394 -TEPDEFTFGSLLASS---ELLETVEMIHALVFRNSLISNIQVSNALASAYSKHGNMEQS 449
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F M RD ISWN++ISG+ NG + GL F ++ + TL+ ++S +
Sbjct: 450 YQIFSDMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQMSEFKSNEYTLNIILSICASI 509
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G++VHGY+++ GFS +VS+ N LI Y G + +VF+ + KD VSW +I
Sbjct: 510 PALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALI 569
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSAC------ACLGNLDLGIK 420
S Y ++A+ ++ M+ + PD+ T VLSAC A L N +GI+
Sbjct: 570 SAYAQHGKGNEAIYQFEAMQHSSEVQPDDATFKIVLSACSHAARNAMLRNCLIGIR 625
>gi|356507622|ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 226/435 (51%), Gaps = 34/435 (7%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H +V+K +V LG++ + ++ K G + A +F ++ + +WNV++ Y AG
Sbjct: 185 VHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLDAGD 244
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA+ ++ RMF V+P +TF L C V L+ G ++H V++ G D V +
Sbjct: 245 AKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVVSS 304
Query: 237 ALITMYVKCGDL-------------------------------VRARLVFDGMPKRDRIS 265
+L+ MYVKCG L + AR FD MP+R+ IS
Sbjct: 305 SLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERNVIS 364
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WNAM++GY + E+ K L +M +V+ D D +TL +++ S + D ++G++VHGY+
Sbjct: 365 WNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHGYIY 424
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAV 384
+ GF D+ + N L+ MY GN F++M + +D VSW +++ Y L ++A+
Sbjct: 425 RHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQAL 484
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ M+ E + P + T ++L ACA L LG ++H +R G + L+ MY
Sbjct: 485 TMFSKMQWE-TKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMY 543
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLV 503
KC+C++ A+EV + ++VI W +II+G N++ EAL F M +KP+ VT
Sbjct: 544 CKCRCLEYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALELFVIMEAEGIKPDHVTFK 603
Query: 504 SILSACARIGALMCG 518
IL AC G + G
Sbjct: 604 GILLACIEEGLVEFG 618
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 248/519 (47%), Gaps = 35/519 (6%)
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
RLC R E + S + + L N + + K L A +F +M D
Sbjct: 70 RLCSSHRAVVEARKVESHLLTFSPNPPTFLLNRAIEAYAKCHCLRDARELFDEMPQPDGG 129
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN LI Y++ GF +E SL+ M G P TF VL +C +L K+VH
Sbjct: 130 SWNALITAYSQLGFPNETFSLFLCM-TRSGFFPTEVTFASVLASCAASSELLLSKQVHGL 188
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
V +FG+ +V + ++L+ +Y KCG + AR +F +P+ + ++WN ++ Y + G+ +
Sbjct: 189 VTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLDAGDAKEA 248
Query: 283 LMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ +F M V P T S+ + A V + G ++HG V+K+G +D V + L+
Sbjct: 249 VFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVVSSSLVN 308
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS-----------VLPDKAVETYQMM 390
MY+ G E+G +VF ++ +D+V WT+++S Y S +P++ V ++ M
Sbjct: 309 MYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERNVISWNAM 368
Query: 391 EAEGSM--------------------PDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
A + D +T+ +L+ A + + ++G ++H R G
Sbjct: 369 LAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHGYIYRHGF 428
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFR 489
S + ++N L+DMY KC ++ F+Q+ D ++ +SW +++ + S +AL F
Sbjct: 429 HSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQALTMFS 488
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
KM KP T V++L ACA L GK+IH +R G D AL+ MY +C
Sbjct: 489 KMQWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMYCKCRC 548
Query: 550 MKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFF 587
++ A + RDV WN ++ G +G A E F
Sbjct: 549 LEYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALELF 587
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 213/456 (46%), Gaps = 41/456 (8%)
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYT-FPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
Y KAG +A S+ KP ++ + R C + ++V H++ F
Sbjct: 40 YLKAGRIRKATSIL-----FAFPKPFPFSLYALFFRLCSSHRAVVEARKVESHLLTFSPN 94
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
++N I Y KC L AR +FD MP+ D SWNA+I+ Y + G + LF+ M
Sbjct: 95 PPTFLLNRAIEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCM 154
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
P +T +SV+++ + L ++VHG V K GF +V + + L+ +Y G
Sbjct: 155 TRSGFFPTEVTFASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVM 214
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSA 408
+ ++F + + V+W ++ Y + +AV + +M P T ++ L A
Sbjct: 215 ADARRMFHEIPQPNAVTWNVIVRRYLDAGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVA 274
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
C+ + L G+++H + ++ GL +++++L++MY KC ++ +VF Q+ ++++ W
Sbjct: 275 CSSVSALREGVQIHGVVVKLGLREDNVVSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCW 334
Query: 469 TSIILGLRLNNRSFEALIFFRKM------------------------------MLNL--K 496
TSI+ G ++ ++ EA FF +M ML++
Sbjct: 335 TSIVSGYAMSGKTLEAREFFDEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKD 394
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ VTL +L+ A I GK++H + R G D L NALLDMY +CG +
Sbjct: 395 VDHVTLGLLLNVSAGISDHEMGKQVHGYIYRHGFHSDLRLSNALLDMYGKCGNLNSTRVW 454
Query: 557 FN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
FN S+ RD +WN LL Y + A F KM
Sbjct: 455 FNQMSDRRDRVSWNALLASYGQHQLSEQALTMFSKM 490
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 150/295 (50%), Gaps = 4/295 (1%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
R+V +++ + + N I+ Y + ++F M D SW +I+ Y
Sbjct: 81 ARKVESHLLTFSPNPPTFLLNRAIEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQ 140
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
P++ + M G P E+T ASVL++CA L L ++H L + G +I+
Sbjct: 141 LGFPNETFSLFLCMTRSGFFPTEVTFASVLASCAASSELLLSKQVHGLVTKFGFCGNVIL 200
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-- 494
++L+D+Y KC + A +FH+IP N ++W I+ + EA+ F +M
Sbjct: 201 GSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLDAGDAKEAVFMFSRMFSTSA 260
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P + T + L AC+ + AL G +IH +++G+ D + ++L++MYV+CGR++ +
Sbjct: 261 VRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVVSSSLVNMYVKCGRLEDGF 320
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG-NWRKLMGLFRKC 607
F+ RD+ W +++GYA G+ A EFF +M + +W ++ + +C
Sbjct: 321 QVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERNVISWNAMLAGYTQC 375
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 3/231 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL ++ M ++ VD L L+ + ++ G +H + + H +RL NA L
Sbjct: 380 KALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHGYIYRHGFHSDLRLSNALL 439
Query: 138 SMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
M+ K G+L F +M DR D SWN L+ Y + ++AL+++ +M W KP
Sbjct: 440 DMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQALTMFSKMQW--ETKPT 497
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
YTF +L C L GK++H +IR G+ D AL+ MY KC L A V
Sbjct: 498 QYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMYCKCRCLEYAIEVLK 557
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
RD I WN +I G N + + L LF++M + PD +T ++ A
Sbjct: 558 RAVSRDVIIWNTIIMGCVHNHKGKEALELFVIMEAEGIKPDHVTFKGILLA 608
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 256/487 (52%), Gaps = 6/487 (1%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ + EG +H+ +V +G++ ++++ K G A VF C++++ WN ++
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G+ + +EA+ ++Q M ++ D +TF +L C + GK+VH I+
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ + V NA + MY K G + A+ +F +P +D ISWNA+ G +N E + + +
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 517
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MR + PD ++ S+ I+A + + G+++H IK G + +V + LI +Y G+
Sbjct: 518 MRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGD 577
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E K+F+++++ +V +I+ + + D+A++ +Q + +G P +T +S+LS
Sbjct: 578 VESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSG 637
Query: 409 CACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVI 466
C+ N +G ++H +++G L ++ +L +Y K K ++ A ++ ++PD KN+
Sbjct: 638 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 467 SWTSIILGLRLNNRSFEALI-FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
WT+II G N +L+ F+R N++ + T S+L AC+ + A GKEIH
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+ G +AL+DMY +CG + ++ F N++D+ WN ++ G+A+ G A
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 584 EEFFRKM 590
F+KM
Sbjct: 818 LLLFQKM 824
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 237/461 (51%), Gaps = 5/461 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N E+A++ M + DE V+++ C + + G +H V K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+S+ + NA L M+ K+G +G A +F + +D SWN L G A+ +EA+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + G+ PD +F + C + + GK++H I++G ++ V ++LI +Y
Sbjct: 515 LKRM-RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +R +F + + NA+I+G+ +N + + LF + + + P +T SS
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 304 VISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
++S + +G++VH Y +K G DD + L +YL E+ K+ + M +
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K++ WT +IS Y + D ++ ++ M DE T ASVL AC+ + G ++
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L ++G SY + LIDMYSKC + + E F ++ +K +++ W S+I+G N
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 813
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE 520
+ EAL+ F+KM L +KP+ VT + +L AC G + G+
Sbjct: 814 ADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 242/475 (50%), Gaps = 7/475 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y E L L S + K S +S G L HA + KM +WN +I G
Sbjct: 240 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299
Query: 171 YAKAGFFDEALSLYQRM-FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+A++G L LY+ M W G+ P TF +L + G+++H + G +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSW--GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
A+V V ++LI +Y KCG A+ VFD +++ + WNAM++G+ +N + + +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ D T S++ A + LG++VH IK + V N + MY +G
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ + +FS + KD +SW + ++ ++AV + M G PD+++ ++ ++AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ + + G ++H LA++ G+ S + ++LID+YSK ++ + ++F Q+ +++
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I G NN EA+ F++++ + LKP+SVT SILS C+ GK++H + L+
Sbjct: 598 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657
Query: 529 GVAFDG-FLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQG 580
GV +D L +L +Y++ ++ A + +++ W +++GYA+ G G
Sbjct: 658 GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYG 712
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 222/462 (48%), Gaps = 37/462 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH + + S L RLG++ + ++ K G +G+AW G +R + + L+ +A++G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ L ++ + G +PD + VL C V L G++VH V++ G+ + V
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCGD+ AR VFDG+ D I W++MI+ Y G Y + L LF M ++ P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ++IS S G + +
Sbjct: 258 DQVTLVTIIST-----------------------------------LASSGRLDHATALL 282
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M + V+W +IS + S L + Y+ M + G P T AS+LSA A +
Sbjct: 283 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 342
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H A+ GL + + + ++LI++Y+KC C A VF +KN++ W +++ G
Sbjct: 343 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 402
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N EA+ F+ MM L+ + T VSIL AC + + GK++H ++ + F
Sbjct: 403 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 462
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
+ NA LDMY + G + A F+ +D +WN L G A+
Sbjct: 463 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 227/480 (47%), Gaps = 38/480 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K+ SV A + M+ K GD+ +A VF + D W+ +I Y +
Sbjct: 177 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 236
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + EAL+L+ RM +G PD T ++ T
Sbjct: 237 VGCYQEALALFSRMDKMGSA-PDQVTLVTIIST--------------------------- 268
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
G L A + MP ++WNA+ISG+ ++G L L+ MR
Sbjct: 269 --------LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P T +S++SA+ + G+++H + G +V V + LI +Y G + +
Sbjct: 321 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAK 380
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF K++V W M++ + + LP++A+ +Q M DE T S+L AC L
Sbjct: 381 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 440
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ LG ++H + ++ + + +AN +DMYSK I A +F IP K+ ISW ++ +
Sbjct: 441 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 500
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
GL N EA+ ++M L+ + P+ V+ + ++AC+ I A GK+IH A++ G+
Sbjct: 501 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 560
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + ++L+D+Y + G ++ + F + + N L+ G+ + A + F++++
Sbjct: 561 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 41/375 (10%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H ++R G + ++L+ +Y K G + A +R + ++++S + +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 277 GEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G L F +R PD L+ V+SA VG GR+VH V+K GFS V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G+ +VF + D + W++MI+CY +A+ + M+ GS
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD++T+ +++S A G LD A
Sbjct: 256 APDQVTLVTIISTLASSGRLD-----------------------------------HATA 280
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
+ ++P + ++W ++I G + F L ++ M L P T S+LSA A + A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTG 573
+ G+++HA A+ G+ + F+ ++L+++Y +CG A N F+ S E+++ WN +LTG
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 574 YAERGQGALAEEFFR 588
+ Q L EE R
Sbjct: 401 FV---QNELPEEAIR 412
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG + +++K L A + +M D ++LF W +I GYA+ G+ D +L + RM
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+ D TF VL+ C V GKE+H + + G+ + +ALI MY KCGD++
Sbjct: 726 N-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVIS 784
Query: 251 ARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ F + K+D + WN+MI G+ +NG + L+LF M E+ + PD +T V+ A
Sbjct: 785 SFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACT 844
Query: 310 LVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSW 367
G GR G + K+ G + + I + G+ +E ++ ++ + D V W
Sbjct: 845 HSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 904
Query: 368 TTMIS 372
T ++
Sbjct: 905 ATYLA 909
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 260/532 (48%), Gaps = 12/532 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L +G+ +A + L +M + + AL + +R R G L S+ K
Sbjct: 62 NALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALK 121
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V +A L ++ K G + A VF M +R+ SWN LI GY ++G AL L
Sbjct: 122 SGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALEL 181
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD TF +L G P ++H ++++G + V+NA IT Y
Sbjct: 182 FLEME-REGLAPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 244 KCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTL 301
+CG L +R +FDG+ RD ISWNAM+ Y NG + + F+ MM+E V PD +
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 302 SSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR---EEGEKVFS 357
+S+IS+ SE D+ GR +HG VIK VCN LI MY + E+ K F+
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ KD VSW +M++ Y L A++ ++ M +E DE ++ L + + L L L
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H L + +G S ++++LI MYSK ID A + F + + + W ++I G
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGF 535
+ ++ I F +M+ P + +T V ++++C+ G + G EI + + GV
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRME 539
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+D+Y R G++ A +S E D W LL G LA +
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASD 591
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 245/473 (51%), Gaps = 14/473 (2%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A VF ++ RD SWN L+ A +G EA L + M G+ + + LR
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH-AQGLASNTFALGSALR 101
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+ G ++ ++ G +V +AL+ +Y KCG + AR VFDGMP+R+ +S
Sbjct: 102 SAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVS 161
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGYV 324
WNA+I+GY E+G+ L LF+ M + PD T +S+++A E G L ++HG +
Sbjct: 162 WNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE--GPSCFLMHQLHGKI 219
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKA 383
+K G + ++V N I Y G+ ++ ++F + + +D++SW M+ Y + + D+A
Sbjct: 220 VKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEA 279
Query: 384 VETY-QMMEAEGSMPDEITIASVLSACACLGNLD-LGIKLHQLAMRTGLISYIIIANTLI 441
++ + +MM+ G PD + S++S+C+ G+ D G +H L +++ L + N LI
Sbjct: 280 MKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALI 339
Query: 442 DMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKP 497
MY++ ++ A + F+ + K+ +SW S++ G + S +AL FFR M N++
Sbjct: 340 AMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ + L + + + L GK+IH + G A + F+ ++L+ MY + G + A F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459
Query: 558 NSNERDVSA-WNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKC 607
++ S WN ++ GYA+ GQ + F +M+ K + +GL C
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSC 512
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 22/386 (5%)
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENG 277
H +++ G A N L+T Y + L AR VFD +P+RD +SWNA+++ +G
Sbjct: 14 HASLLKSGVAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + L M + + L S + ++ + +G ++ +K G +++V +
Sbjct: 73 AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ +Y G + +VF M ++ VSW +I+ Y S A+E + ME EG P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192
Query: 398 DEITIASVLSAC---ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
DE T AS+L+A +C L +LH ++ G + + N I YS+C + +
Sbjct: 193 DEATFASLLTAVEGPSCF----LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR 248
Query: 455 EVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACAR 511
+F I D +++ISW +++ N EA+ FF +MM + P+ + SI+S+C+
Sbjct: 249 RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSE 308
Query: 512 IGA-LMCGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGR---MKPAWNQFNS-NERDV 564
G G+ I H L I A +G P NAL+ MY R M+ A+ FNS +D
Sbjct: 309 HGHDDHQGRVI--HGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDT 366
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
+WN +LTGY++ G A A +FFR M
Sbjct: 367 VSWNSMLTGYSQHGLSADALKFFRCM 392
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 273/553 (49%), Gaps = 45/553 (8%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL--SMFVKFGDLGHAW 150
+ E + L+ C+ R + + +H+ + KT H ++ + + S + GD+ +A
Sbjct: 27 LQEHPSLKLLSKCQSIRTFKQ---IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAI 83
Query: 151 YVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F + + +LF WN +I G + + AL + RM + GV+P+ YTFP +L++C +
Sbjct: 84 SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIY-SGVEPNSYTFPFLLKSCAKL 142
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV--------------------- 249
GK++H HV++ G+ +DV + +LI MY + G++
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202
Query: 250 ----------RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
RAR +FD MP +D +SWNAMI+GY + G + L+LF MR+ V P+
Sbjct: 203 AGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNES 262
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
T+ SV+SA LG + ++ G ++ + N LI MY G+ + ++F M
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+DV+SW MI Y +A+ ++ M A G P EIT S+L +CA LG +DLG
Sbjct: 323 LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H + ++ +LID+Y+KC I A +VF + K++ SW ++I GL ++
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHG 442
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLP 537
++ +A F KM + ++PN +T V ILSAC G + G++ + ++ ++
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY 502
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERGQGAL----AEEFFRKMI 591
++D+ R G + A + + E D + W LL + G+ L AE F
Sbjct: 503 GCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEP 562
Query: 592 DSKGNWRKLMGLF 604
D+ G + L ++
Sbjct: 563 DNPGAYVLLSNIY 575
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 4/340 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++AL + M++ N+ +E +V+++ C D G + S + +++L
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLV 299
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ K GDL A +F M +RD+ SWNV+IGGY + EAL+L++ M GV
Sbjct: 300 NALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREML-ASGV 358
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P TF +L +C + + GK +H ++ + + +LI +Y KCG++V AR
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQ 418
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDGM + SWNAMI G +G+ K LF M ++P+ +T ++SA + G
Sbjct: 419 VFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGL 478
Query: 314 EKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMI 371
LG++ +++ S +I + G EE E + ME K D W +++
Sbjct: 479 VDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538
Query: 372 -SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+C + + + ++ E E P + S + A A
Sbjct: 539 GACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGA 578
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 256/487 (52%), Gaps = 6/487 (1%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ + EG +H+ +V +G++ ++++ K G A VF C++++ WN ++
Sbjct: 339 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 398
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G+ + +EA+ ++Q M ++ D +TF +L C + GK+VH I+
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ + V NA + MY K G + A+ +F +P +D ISWNA+ G +N E + + +
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 517
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MR + PD ++ S+ I+A + + G+++H IK G + +V + LI +Y G+
Sbjct: 518 MRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGD 577
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E K+F+++++ +V +I+ + + D+A++ +Q + +G P +T +S+LS
Sbjct: 578 VESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSG 637
Query: 409 CACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVI 466
C+ N +G ++H +++G L ++ +L +Y K K ++ A ++ ++PD KN+
Sbjct: 638 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 697
Query: 467 SWTSIILGLRLNNRSFEALI-FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
WT+II G N +L+ F+R N++ + T S+L AC+ + A GKEIH
Sbjct: 698 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 757
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+ G +AL+DMY +CG + ++ F N++D+ WN ++ G+A+ G A
Sbjct: 758 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 817
Query: 584 EEFFRKM 590
F+KM
Sbjct: 818 LLLFQKM 824
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 237/461 (51%), Gaps = 5/461 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N E+A++ M + DE V+++ C + + G +H V K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+S+ + NA L M+ K+G +G A +F + +D SWN L G A+ +EA+ +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + G+ PD +F + C + + GK++H I++G ++ V ++LI +Y
Sbjct: 515 LKRM-RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +R +F + + NA+I+G+ +N + + LF + + + P +T SS
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 304 VISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
++S + +G++VH Y +K G DD + L +YL E+ K+ + M +
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K++ WT +IS Y + D ++ ++ M DE T ASVL AC+ + G ++
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L ++G SY + LIDMYSKC + + E F ++ +K +++ W S+I+G N
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 813
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE 520
+ EAL+ F+KM L +KP+ VT + +L AC G + G+
Sbjct: 814 ADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 242/475 (50%), Gaps = 7/475 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y E L L S + K S +S G L HA + KM +WN +I G
Sbjct: 240 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 299
Query: 171 YAKAGFFDEALSLYQRM-FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+A++G L LY+ M W G+ P TF +L + G+++H + G +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSW--GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
A+V V ++LI +Y KCG A+ VFD +++ + WNAM++G+ +N + + +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ D T S++ A + LG++VH IK + V N + MY +G
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ + +FS + KD +SW + ++ ++AV + M G PD+++ ++ ++AC
Sbjct: 478 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ + + G ++H LA++ G+ S + ++LID+YSK ++ + ++F Q+ +++
Sbjct: 538 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I G NN EA+ F++++ + LKP+SVT SILS C+ GK++H + L+
Sbjct: 598 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657
Query: 529 GVAFDG-FLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQG 580
GV +D L +L +Y++ ++ A + +++ W +++GYA+ G G
Sbjct: 658 GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYG 712
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 222/462 (48%), Gaps = 37/462 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH + + S L RLG++ + ++ K G +G+AW G +R + + L+ +A++G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ L ++ + G +PD + VL C V L G++VH V++ G+ + V
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCGD+ AR VFDG+ D I W++MI+ Y G Y + L LF M ++ P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ++IS S G + +
Sbjct: 258 DQVTLVTIIST-----------------------------------LASSGRLDHATALL 282
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M + V+W +IS + S L + Y+ M + G P T AS+LSA A +
Sbjct: 283 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 342
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H A+ GL + + + ++LI++Y+KC C A VF +KN++ W +++ G
Sbjct: 343 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 402
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N EA+ F+ MM L+ + T VSIL AC + + GK++H ++ + F
Sbjct: 403 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 462
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
+ NA LDMY + G + A F+ +D +WN L G A+
Sbjct: 463 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 227/480 (47%), Gaps = 38/480 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K+ SV A + M+ K GD+ +A VF + D W+ +I Y +
Sbjct: 177 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 236
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + EAL+L+ RM +G PD T ++ T
Sbjct: 237 VGCYQEALALFSRMDKMGSA-PDQVTLVTIIST--------------------------- 268
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
G L A + MP ++WNA+ISG+ ++G L L+ MR
Sbjct: 269 --------LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P T +S++SA+ + G+++H + G +V V + LI +Y G + +
Sbjct: 321 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAK 380
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF K++V W M++ + + LP++A+ +Q M DE T S+L AC L
Sbjct: 381 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 440
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ LG ++H + ++ + + +AN +DMYSK I A +F IP K+ ISW ++ +
Sbjct: 441 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 500
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
GL N EA+ ++M L+ + P+ V+ + ++AC+ I A GK+IH A++ G+
Sbjct: 501 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 560
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + ++L+D+Y + G ++ + F + + N L+ G+ + A + F++++
Sbjct: 561 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 620
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 41/375 (10%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H ++R G + ++L+ +Y K G + A +R + ++++S + +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 277 GEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G L F +R PD L+ V+SA VG GR+VH V+K GFS V
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G+ +VF + D + W++MI+CY +A+ + M+ GS
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD++T+ +++S A G LD A
Sbjct: 256 APDQVTLVTIISTLASSGRLD-----------------------------------HATA 280
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
+ ++P + ++W ++I G + F L ++ M L P T S+LSA A + A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 340
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTG 573
+ G+++HA A+ G+ + F+ ++L+++Y +CG A N F+ S E+++ WN +LTG
Sbjct: 341 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 400
Query: 574 YAERGQGALAEEFFR 588
+ Q L EE R
Sbjct: 401 FV---QNELPEEAIR 412
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG + +++K L A + +M D ++LF W +I GYA+ G+ D +L + RM
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+ D TF VL+ C V GKE+H + + G+ + +ALI MY KCGD++
Sbjct: 726 N-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVIS 784
Query: 251 ARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ F + K+D + WN+MI G+ +NG + L+LF M E+ + PD +T V+ A
Sbjct: 785 SFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACT 844
Query: 310 LVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSW 367
G GR G + K+ G + + I + G+ +E ++ ++ + D V W
Sbjct: 845 HSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 904
Query: 368 TTMIS 372
T ++
Sbjct: 905 ATYLA 909
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 217/394 (55%), Gaps = 4/394 (1%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ ++ C L K +H H+++ G + LI Y+KC + AR +FD MP
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
R ++WN+MIS + G+ + + L+ M V PD T S++ A +G + G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 320 VHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
HG + +GF D V ++ MY FG ++ VF R+ KDVV +T +I Y
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
L +A+E ++ M P+E T+ASVL +C LG+L G +H L ++ GL S +
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
+L+ MYSKC ++ +++VF+ + + ++WTS I+GL N R AL FR+MM ++ P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
N TL SIL AC+ + L G++IHA +++GV + F+ AL+ +Y +CG ++ A + F
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+S E D+ + N ++ YA+ G G A E F ++
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERL 396
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 245/500 (49%), Gaps = 10/500 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+L+ C K+ LH+ + K+ S S G+ + ++K + A +F +M +
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
R + +WN +I + G EA+ LY M + GV PD YTF + + + + G++
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLF-EGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 219 VHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
H + G+E +D V ++ MY K G + AR VFD + +D + + A+I GY ++G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ L +F M + P+ TL+SV+ + +GD G+ +HG V+K G V+
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY E+ KVF+ + V+WT+ I + + A+ ++ M P
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T++S+L AC+ L L+ G ++H + ++ G+ + LI +Y KC ++KA VF
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
+ + +++S ++I N EAL F ++ L L+PN VT +SIL AC G +
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422
Query: 517 CGKEIHA---HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLT 572
G +I + + I + D + ++D+ R R + A + DV W LL
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHY--TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLN 480
Query: 573 GYAERGQGALAEEFFRKMID 592
G+ +AE+F +KM+D
Sbjct: 481 ACKIHGEVEMAEKFMKKMLD 500
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
S+++ C +L LH +++G + + + LID Y KC I +A ++F ++P+
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSL-FSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+++++W S+I ++ EA+ + M+ + P++ T +I A + +G G++
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 522 HAHALRIGVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQ 579
H A+ +G DGF+ ++DMY + G+MK A F+ ++DV + L+ GY + G
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGL 183
Query: 580 GALAEEFFRKMIDSK 594
A E F M+ S+
Sbjct: 184 DGEALEVFEDMVGSR 198
>gi|302796687|ref|XP_002980105.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
gi|300152332|gb|EFJ18975.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
Length = 696
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 212/403 (52%), Gaps = 4/403 (0%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+ D T + C + D +GK++H ++ G A V + N+L+ MY KCG + A
Sbjct: 5 GVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R FD MP+RD ISWNAMI+ Y ++ + + L+ R PD +T +S+++A
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD K GR +H + + F D VCN LI MY G+ ++ VF DV +WTT+I
Sbjct: 125 GDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVI 184
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y + A T++ M EG +EIT +VL AC+ L L+ G +H+LA+ +GL
Sbjct: 185 AAYTRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLD 244
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + N+LI MY KC + A +VF ++ +NVI+WT+++ G + R+
Sbjct: 245 FSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCRE 304
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
MML ++P VT +L C AL G IH + G+ D + NAL++MY + G
Sbjct: 305 MMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGG 364
Query: 550 MKPAWNQFNSNERDV--SAWNILLTGYAERGQGALAEEFFRKM 590
++ A FN +D+ S+W ++ Y + G A E + +
Sbjct: 365 LEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHL 407
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 226/451 (50%), Gaps = 15/451 (3%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +SM+ G L A VF D+ +W +I Y + G + A + +++M G +
Sbjct: 150 NGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIAAYTRHGKLECAFATWRKMHQEG-L 208
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ + TF VL C + L+ GK VH + G + + + N+LI+MY KC L AR
Sbjct: 209 RSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSSLGDARD 268
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +R+ I+W AM++G+ + + G+ L M V P +T + ++ G
Sbjct: 269 VFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREMMLEGVRPQPVTFAGLLDGCR--G 326
Query: 313 DEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS-RMESKDVVSWTT 369
E L G +HGYV G D +V N L+ MY G E+ KVF+ + + SW +
Sbjct: 327 REALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLEDAVKVFNDQRQDLKTSSWAS 386
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I Y L +A E Y ++ EG DE ASVL C + +H + +G
Sbjct: 387 VIGAYVQHGLKREATELYHHLDLEGMEVDENVFASVLGFCDSATQVR---DVHSRILASG 443
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
L ++ AN ++ Y K D+A EVF I +VISW+++I + +EA+ F
Sbjct: 444 LEQRMVAANAVMTAYGKAGHPDEAREVFLGISRPSVISWSALIAAY---GQHWEAIKTFE 500
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M L +KPN+ TL S+L ACA +GA G+ IHA L A + + NA +Y +C
Sbjct: 501 LMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYAQNTTVLNAAASLYAKCS 560
Query: 549 RMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
R+ A F+S +D +WN +++ YA++G
Sbjct: 561 RVADASRVFSSIPCKDAVSWNAIVSAYAKQG 591
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 232/493 (47%), Gaps = 27/493 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G LE A M + + +E + ++ C + G ++H + + S+R+
Sbjct: 190 HGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDFSLRM 249
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N+ +SM+ K LG A VF +M R++ +W ++ G+A+ + L + M +
Sbjct: 250 ENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREMM-LE 308
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GV+P TF +L C G L G +H +V G E+D V NAL+ MY K G L A
Sbjct: 309 GVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLEDA 368
Query: 252 RLVFDGMPKRDRIS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI----S 306
VF+ + + S W ++I Y ++G + L+ + ++ D +SV+ S
Sbjct: 369 VKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDENVFASVLGFCDS 428
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A+++ R+VH ++ G + N ++ Y G+ +E +VF + V+S
Sbjct: 429 ATQV-------RDVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVFLGISRPSVIS 481
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W+ +I+ Y +A++T+++M EG P+ T+ SVL ACA +G + G ++H L +
Sbjct: 482 WSALIAAYGQHW---EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVL 538
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ N +Y+KC + A VF IP K+ +SW +I+ +A+
Sbjct: 539 AGPYAQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIF 598
Query: 487 FFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----AL 540
R+M + P+ +T ++IL +C++ G L E L V G +P L
Sbjct: 599 LSRQMQVEGFVPDDITFITILYSCSQSGQLAAACE----CLSSMVCDFGMVPAREHYVCL 654
Query: 541 LDMYVRCGRMKPA 553
+D+ R GR+ A
Sbjct: 655 IDVLGRAGRVGDA 667
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 229/518 (44%), Gaps = 9/518 (1%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
DE L+N V C +G +H+ + + SV L N+ + M+ K G + A F
Sbjct: 9 DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M +RDL SWN +I YA+ +A+ LY + G KPD TF +L C DL
Sbjct: 69 DRMPERDLISWNAMITVYAQHECGKQAIQLYA-YSRLEGTKPDEVTFASLLNACFASGDL 127
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
K G+ +H H + + +D V N LI+MY CG L A VF+ + D +W +I+ Y
Sbjct: 128 KFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIAAY 187
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+G+ + M + + + +T +V+ A + + G+ VH + G +
Sbjct: 188 TRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDFSL 247
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+ N LI MY + + VF RM ++V++WT M++ + + + M
Sbjct: 248 RMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREMML 307
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG P +T A +L C L +G +H G+ S + N L++MYSK ++
Sbjct: 308 EGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLED 367
Query: 453 ALEVFH-QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACA 510
A++VF+ Q D SW S+I + EA + + L ++ + S+L C
Sbjct: 368 AVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDENVFASVLGFCD 427
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNI 569
+ +++H+ L G+ NA++ Y + G A F R V +W+
Sbjct: 428 SATQV---RDVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVFLGISRPSVISWSA 484
Query: 570 LLTGYAERGQGALAEEFFRKMIDSKGNWRKLMGLFRKC 607
L+ Y + + E + K N L + R C
Sbjct: 485 LIAAYGQHWEAIKTFELM-NLEGVKPNATTLTSVLRAC 521
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 169/366 (46%), Gaps = 9/366 (2%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG-KM 156
L+ C + G +H V + NA ++M+ K G L A VF +
Sbjct: 317 FAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLEDAVKVFNDQR 376
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
D SW +IG Y + G EA LY + + G++ D F VL C ++
Sbjct: 377 QDLKTSSWASVIGAYVQHGLKREATELYHHLD-LEGMEVDENVFASVLGFCDSATQVR-- 433
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+VH ++ G E + NA++T Y K G AR VF G+ + ISW+A+I+ Y
Sbjct: 434 -DVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVFLGISRPSVISWSALIAAY--- 489
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G++ + + F +M V P+ TL+SV+ A VG + GR +H V+ ++ + +V
Sbjct: 490 GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYAQNTTVL 549
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N +Y + +VFS + KD VSW ++S Y L A+ + M+ EG +
Sbjct: 550 NAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFV 609
Query: 397 PDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD+IT ++L +C+ G L + L + G++ LID+ + + A+E
Sbjct: 610 PDDITFITILYSCSQSGQLAAACECLSSMVCDFGMVPAREHYVCLIDVLGRAGRVGDAVE 669
Query: 456 VFHQIP 461
+ +P
Sbjct: 670 LKDCMP 675
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 2/203 (0%)
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M+ EG DEIT+ + +SACA LG+ G ++H + +GL + ++++N+L+ MY KC
Sbjct: 1 MDLEGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSA 508
+++A F ++P++++ISW ++I + +A+ + L KP+ VT S+L+A
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAW 567
C G L G+ +H H L D + N L+ MY CG + A F S + DV W
Sbjct: 121 CFASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTW 180
Query: 568 NILLTGYAERGQGALAEEFFRKM 590
++ Y G+ A +RKM
Sbjct: 181 TTVIAAYTRHGKLECAFATWRKM 203
>gi|302819906|ref|XP_002991622.1| hypothetical protein SELMODRAFT_451234 [Selaginella moellendorffii]
gi|300140655|gb|EFJ07376.1| hypothetical protein SELMODRAFT_451234 [Selaginella moellendorffii]
Length = 459
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 232/449 (51%), Gaps = 25/449 (5%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M RD+ SWN ++G F EALSL++ M +KPD TF L C + L+
Sbjct: 1 MDRRDIVSWNAVLGAQVLHEQFREALSLFKSM----KMKPDAITFATALTACASLEALEE 56
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+E+H + G E+ V NAL+TMY +CG L A+ VF G RD +SW+A+I+ + +
Sbjct: 57 GREIHRKTVEAGLESVTMVRNALVTMYARCGSLEDAQGVFTGTVDRDVVSWSALIAAHAQ 116
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+G+ ++ + ++ M ++ D T +S++SA G GR VH +I GF D V
Sbjct: 117 HGQDLEAIKVYRRMNLEGIEADVFTFASILSAVSSPGLLPEGRTVHRQIISRGFEGDTVV 176
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G+ F + SK++VSW MI+ Y + +A+ Y+ M+ + +
Sbjct: 177 GTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQEALLLYEKMQQDEA 236
Query: 396 MP--DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
P D +T ASVL+AC+ LG + G +LH +G +I+ N L+DMY KC + ++
Sbjct: 237 KPKADGLTFASVLAACSNLGEISRGRELHYDVAASGFAEDLIVQNALVDMYGKCGNLVES 296
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARI 512
VF I ++VISWTS++ + EA+ +M L ++ + VTL SIL AC+
Sbjct: 297 RNVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRMSLEGVEADDVTLTSILQACSHS 356
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSNERDVSA- 566
G + + + +R G P+ L+D+ R G ++ A +F ++ D+ A
Sbjct: 357 GLVDAAGSVFSTMVRD----QGMQPSIEHKLCLMDLLGRTGWIEEA-EEFLASSEDLKAR 411
Query: 567 ---WNILLTG---YAERGQ-GALAEEFFR 588
W L+ +E+G+ G A EF R
Sbjct: 412 AASWTSFLSACERQSEQGRAGRAAREFGR 440
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 209/414 (50%), Gaps = 9/414 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L+ +AL SM+ + D + C +EG +H +
Sbjct: 10 NAVLGAQVLHEQFREALSLFKSMK---MKPDAITFATALTACASLEALEEGREIHRKTVE 66
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ NA ++M+ + G L A VF DRD+ SW+ LI +A+ G EA+ +
Sbjct: 67 AGLESVTMVRNALVTMYARCGSLEDAQGVFTGTVDRDVVSWSALIAAHAQHGQDLEAIKV 126
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+RM + G++ DV+TF +L L G+ VH +I G+E D V AL+ MY
Sbjct: 127 YRRMN-LEGIEADVFTFASILSAVSSPGLLPEGRTVHRQIISRGFEGDTVVGTALVNMYA 185
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP--DFMTL 301
+CGD+V AR FD + ++ +SWNAMI+GY + G + L+L+ M++ P D +T
Sbjct: 186 RCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQEALLLYEKMQQDEAKPKADGLTF 245
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+SV++A +G+ GRE+H V GF++D+ V N L+ MY GN E VF ++S
Sbjct: 246 ASVLAACSNLGEISRGRELHYDVAASGFAEDLIVQNALVDMYGKCGNLVESRNVFEGIKS 305
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V+SWT+M++ Y +AVE M EG D++T+ S+L AC+ G +D +
Sbjct: 306 RSVISWTSMVTAYARHGHGAEAVELVWRMSLEGVEADDVTLTSILQACSHSGLVDAAGSV 365
Query: 422 HQLAMR-TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--KNVISWTSII 472
+R G+ I L+D+ + I++A E D SWTS +
Sbjct: 366 FSTMVRDQGMQPSIEHKLCLMDLLGRTGWIEEAEEFLASSEDLKARAASWTSFL 419
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 177/337 (52%), Gaps = 7/337 (2%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +RD +SWNA++ + ++ + L LF M+ + PD +T ++ ++A + + G
Sbjct: 1 MDRRDIVSWNAVLGAQVLHEQFREALSLFKSMK---MKPDAITFATALTACASLEALEEG 57
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
RE+H ++ G V N L+ MY G+ E+ + VF+ +DVVSW+ +I+ +
Sbjct: 58 REIHRKTVEAGLESVTMVRNALVTMYARCGSLEDAQGVFTGTVDRDVVSWSALIAAHAQH 117
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A++ Y+ M EG D T AS+LSA + G L G +H+ + G ++
Sbjct: 118 GQDLEAIKVYRRMNLEGIEADVFTFASILSAVSSPGLLPEGRTVHRQIISRGFEGDTVVG 177
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL-- 495
L++MY++C + A F + KN++SW ++I G S EAL+ + KM +
Sbjct: 178 TALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGYVQAGSSQEALLLYEKMQQDEAK 237
Query: 496 -KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
K + +T S+L+AC+ +G + G+E+H G A D + NAL+DMY +CG + +
Sbjct: 238 PKADGLTFASVLAACSNLGEISRGRELHYDVAASGFAEDLIVQNALVDMYGKCGNLVESR 297
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
N F R V +W ++T YA G GA A E +M
Sbjct: 298 NVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRM 334
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 113 EGLYLH-SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
EG +H ++S+ +V +G A ++M+ + GD+ A F +C +++ SWN +I GY
Sbjct: 157 EGRTVHRQIISRGFEGDTV-VGTALVNMYARCGDVVTARTNFDNLCSKNIVSWNAMIAGY 215
Query: 172 AKAGFFDEALSLYQRMFW-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
+AG EAL LY++M K D TF VL C + ++ RG+E+H V G+
Sbjct: 216 VQAGSSQEALLLYEKMQQDEAKPKADGLTFASVLAACSNLGEISRGRELHYDVAASGFAE 275
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ V NAL+ MY KCG+LV +R VF+G+ R ISW +M++ Y +G + + L M
Sbjct: 276 DLIVQNALVDMYGKCGNLVESRNVFEGIKSRSVISWTSMVTAYARHGHGAEAVELVWRMS 335
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNR 349
V+ D +TL+S++ A G V +++ G + L+ + G
Sbjct: 336 LEGVEADDVTLTSILQACSHSGLVDAAGSVFSTMVRDQGMQPSIEHKLCLMDLLGRTGWI 395
Query: 350 EEGEKVFSRMES--KDVVSWTTMISCYE 375
EE E+ + E SWT+ +S E
Sbjct: 396 EEAEEFLASSEDLKARAASWTSFLSACE 423
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 256/487 (52%), Gaps = 6/487 (1%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
+ + EG +H+ +V +G++ ++++ K G A VF C++++ WN ++
Sbjct: 349 KAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAML 408
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
G+ + +EA+ ++Q M ++ D +TF +L C + GK+VH I+
Sbjct: 409 TGFVQNELPEEAIRMFQYMMRYT-LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 467
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ + V NA + MY K G + A+ +F +P +D ISWNA+ G +N E + + +
Sbjct: 468 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 527
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
MR + PD ++ S+ I+A + + G+++H IK G + +V + LI +Y G+
Sbjct: 528 MRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGD 587
Query: 349 REEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
E K+F+++++ +V +I+ + + D+A++ +Q + +G P +T +S+LS
Sbjct: 588 VESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSG 647
Query: 409 CACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVI 466
C+ N +G ++H +++G L ++ +L +Y K K ++ A ++ ++PD KN+
Sbjct: 648 CSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLF 707
Query: 467 SWTSIILGLRLNNRSFEALI-FFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
WT+II G N +L+ F+R N++ + T S+L AC+ + A GKEIH
Sbjct: 708 EWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLI 767
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+ G +AL+DMY +CG + ++ F N++D+ WN ++ G+A+ G A
Sbjct: 768 TKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEA 827
Query: 584 EEFFRKM 590
F+KM
Sbjct: 828 LLLFQKM 834
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 237/461 (51%), Gaps = 5/461 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L N E+A++ M + DE V+++ C + + G +H V K
Sbjct: 405 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+S+ + NA L M+ K+G +G A +F + +D SWN L G A+ +EA+ +
Sbjct: 465 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 524
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+RM + G+ PD +F + C + + GK++H I++G ++ V ++LI +Y
Sbjct: 525 LKRM-RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 583
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K GD+ +R +F + + NA+I+G+ +N + + LF + + + P +T SS
Sbjct: 584 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 643
Query: 304 VISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
++S + +G++VH Y +K G DD + L +YL E+ K+ + M +
Sbjct: 644 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 703
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K++ WT +IS Y + D ++ ++ M DE T ASVL AC+ + G ++
Sbjct: 704 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 763
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L ++G SY + LIDMYSKC + + E F ++ +K +++ W S+I+G N
Sbjct: 764 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGY 823
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE 520
+ EAL+ F+KM L +KP+ VT + +L AC G + G+
Sbjct: 824 ADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 864
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 242/475 (50%), Gaps = 7/475 (1%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
Y E L L S + K S +S G L HA + KM +WN +I G
Sbjct: 250 YQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISG 309
Query: 171 YAKAGFFDEALSLYQRM-FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+A++G L LY+ M W G+ P TF +L + G+++H + G +
Sbjct: 310 HAQSGLEFNVLGLYKDMRSW--GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
A+V V ++LI +Y KCG A+ VFD +++ + WNAM++G+ +N + + +F M
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 427
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ D T S++ A + LG++VH IK + V N + MY +G
Sbjct: 428 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 487
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ + +FS + KD +SW + ++ ++AV + M G PD+++ ++ ++AC
Sbjct: 488 GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ + + G ++H LA++ G+ S + ++LID+YSK ++ + ++F Q+ +++
Sbjct: 548 SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 607
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I G NN EA+ F++++ + LKP+SVT SILS C+ GK++H + L+
Sbjct: 608 ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 667
Query: 529 GVAFDG-FLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQG 580
GV +D L +L +Y++ ++ A + +++ W +++GYA+ G G
Sbjct: 668 GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYG 722
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 222/462 (48%), Gaps = 37/462 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH + + S L RLG++ + ++ K G +G+AW G +R + + L+ +A++G
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ L ++ + G +PD + VL C V L G++VH V++ G+ + V
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCGD+ AR VFDG+ D I W++MI+ Y G Y + L LF M ++ P
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ++IS S G + +
Sbjct: 268 DQVTLVTIIST-----------------------------------LASSGRLDHATALL 292
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M + V+W +IS + S L + Y+ M + G P T AS+LSA A +
Sbjct: 293 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 352
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H A+ GL + + + ++LI++Y+KC C A VF +KN++ W +++ G
Sbjct: 353 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 412
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N EA+ F+ MM L+ + T VSIL AC + + GK++H ++ + F
Sbjct: 413 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 472
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
+ NA LDMY + G + A F+ +D +WN L G A+
Sbjct: 473 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 514
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 227/480 (47%), Gaps = 38/480 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K+ SV A + M+ K GD+ +A VF + D W+ +I Y +
Sbjct: 187 GRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHR 246
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G + EAL+L+ RM +G PD T ++ T
Sbjct: 247 VGCYQEALALFSRMDKMGSA-PDQVTLVTIIST--------------------------- 278
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
G L A + MP ++WNA+ISG+ ++G L L+ MR
Sbjct: 279 --------LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 330
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P T +S++SA+ + G+++H + G +V V + LI +Y G + +
Sbjct: 331 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAK 390
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF K++V W M++ + + LP++A+ +Q M DE T S+L AC L
Sbjct: 391 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 450
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ LG ++H + ++ + + +AN +DMYSK I A +F IP K+ ISW ++ +
Sbjct: 451 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 510
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
GL N EA+ ++M L+ + P+ V+ + ++AC+ I A GK+IH A++ G+
Sbjct: 511 GLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICS 570
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + ++L+D+Y + G ++ + F + + N L+ G+ + A + F++++
Sbjct: 571 NHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVL 630
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 41/375 (10%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ +H ++R G + ++L+ +Y K G + A +R + ++++S + +
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 277 GEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G L F +R PD L+ V+SA VG GR+VH V+K GFS V
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G+ +VF + D + W++MI+CY +A+ + M+ GS
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD++T+ +++S A G LD A
Sbjct: 266 APDQVTLVTIISTLASSGRLD-----------------------------------HATA 290
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
+ ++P + ++W ++I G + F L ++ M L P T S+LSA A + A
Sbjct: 291 LLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKA 350
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTG 573
+ G+++HA A+ G+ + F+ ++L+++Y +CG A N F+ S E+++ WN +LTG
Sbjct: 351 FVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTG 410
Query: 574 YAERGQGALAEEFFR 588
+ Q L EE R
Sbjct: 411 FV---QNELPEEAIR 422
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LG + +++K L A + +M D ++LF W +I GYA+ G+ D +L + RM
Sbjct: 676 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 735
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+ D TF VL+ C V GKE+H + + G+ + +ALI MY KCGD++
Sbjct: 736 N-VRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVIS 794
Query: 251 ARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ F + K+D + WN+MI G+ +NG + L+LF M E+ + PD +T V+ A
Sbjct: 795 SFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACT 854
Query: 310 LVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSW 367
G GR G + K+ G + + I + G+ +E ++ ++ + D V W
Sbjct: 855 HSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 914
Query: 368 TTMIS 372
T ++
Sbjct: 915 ATYLA 919
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/479 (31%), Positives = 250/479 (52%), Gaps = 11/479 (2%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V K+ S + +G+A +S F + G L A +F + +R+ + N LI G K +EA
Sbjct: 296 VLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEA 355
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPD--LKRGKEVHVHVIRFGY-EADVDVV 235
+ ++ V D TF +L +P+ L RG+EVH H++R G + + +
Sbjct: 356 VGIFMGTRDSFVVNTD--TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALS 413
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N L+ MY KCG + +A VF + RDR+SWN +IS +NG +M + MMR+ +
Sbjct: 414 NGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCIS 473
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P S +S+ + G++VH +K G D SV N L+KMY G R E ++
Sbjct: 474 PSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEI 533
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPD-KAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F+ M D+VSW +++ S P ++VE + M G P+++T ++LSA + L
Sbjct: 534 FNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSV 593
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIIL 473
L+LG ++H + ++ G I + N L+ Y+K +D ++F + ++ +SW S+I
Sbjct: 594 LELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMIS 653
Query: 474 GLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N E + + M N + T +L+ACA + AL G E+HA +R +
Sbjct: 654 GYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLES 713
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D + +ALLDMY +CGR+ A FNS ++++ +WN +++GYA G G A E F +M
Sbjct: 714 DVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEM 772
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 158/509 (31%), Positives = 258/509 (50%), Gaps = 27/509 (5%)
Query: 108 KRGYD---EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
+RG + E L+L +V + ++H + L N ++++ K L A VF M +R+ SW
Sbjct: 68 RRGEEAAPERLHL-ELVKRGLTH-DLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSW 125
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGG--VKPDVYTFPCVLRTCGGV-PD-LKRGKEVH 220
L+ GY +G DEA +++ M W G +P +TF VLR C PD L +VH
Sbjct: 126 TCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVH 185
Query: 221 VHVIRFGYEADVDVVNALITMYVKC--GDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
V + Y ++ V NALI+MY C G ++A+ VFD P RD I+WNA++S Y + G
Sbjct: 186 GLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGY 245
Query: 279 YMKGLMLFIMM----REVLVDPDFMTLSSVISASELVG-DEKLGREVHGYVIKMGFSDDV 333
+ LF+ M + + P+ T S+I+A+ L + +V V+K G S D+
Sbjct: 246 VVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDL 305
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+ + G +E + +F ++ ++ V+ +I ++AV + M +
Sbjct: 306 YVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRD 364
Query: 394 GSMPDEITIASVLSACACLG----NLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCK 448
+ + T +LSA A L G ++H +RTGLI I ++N L++MY+KC
Sbjct: 365 SFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCG 424
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
IDKA VF + ++ +SW +II L N A++ + M + P++ +S LS
Sbjct: 425 AIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLS 484
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSA 566
+CA + L G+++H A++ G+ D + NAL+ MY CG +W FNS E D+ +
Sbjct: 485 SCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVS 544
Query: 567 WNILLTGYAERGQGALAE--EFFRKMIDS 593
WN ++ G AE E F M+ S
Sbjct: 545 WNSIM-GVMVSSHAPTAESVEVFSNMMRS 572
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 218/411 (53%), Gaps = 11/411 (2%)
Query: 110 GYDEGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
G G +H + +T + L + L N ++M+ K G + A VF +C RD SWN +I
Sbjct: 389 GLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTII 448
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
+ GF + A+ Y M G + P + L +C + L G++VH +++G
Sbjct: 449 SVLDQNGFCEGAMMNYC-MMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGL 507
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA----MISGYFENGEYMKGLM 284
+ D V NAL+ MY CG + +F+ M + D +SWN+ M+S + E ++ +
Sbjct: 508 DLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVE--V 565
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
MMR L P+ +T +++SA + +LG++VH V+K G +D +V N L+ Y
Sbjct: 566 FSNMMRSGLT-PNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYA 624
Query: 345 SFGNREEGEKVFSRMESK-DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G+ + E++FS M + D VSW +MIS Y + + ++ +M M D T +
Sbjct: 625 KSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFS 684
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
VL+ACA + L+ G+++H +R+ L S +++ + L+DMYSKC ID A +VF+ + K
Sbjct: 685 IVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQK 744
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
N SW S+I G + +AL F +M N P+ VT VS+LSAC+ G
Sbjct: 745 NEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAG 795
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 209/422 (49%), Gaps = 16/422 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ L NG E A+ M++ I A ++ + C R G +H K
Sbjct: 445 NTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVK 504
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN----VLIGGYAKAGFFDE 179
L + NA + M+ G +W +F M + D+ SWN V++ +A E
Sbjct: 505 WGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTA---E 561
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
++ ++ M G+ P+ TF +L + L+ GK+VH V++ G D V NAL+
Sbjct: 562 SVEVFSNMMR-SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALM 620
Query: 240 TMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVD 295
+ Y K GD+ +F M +RD +SWN+MISGY NG E M + L + ++L
Sbjct: 621 SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQML-- 678
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
D T S V++A V + G E+H + I+ DV V + L+ MY G + KV
Sbjct: 679 -DCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKV 737
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F+ M K+ SW +MIS Y L +KA+E ++ M+ G+ PD +T SVLSAC+ G +
Sbjct: 738 FNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLV 797
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
D G+ ++ G++ +I + +ID+ + + K E +++P K N + W ++++
Sbjct: 798 DRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVA 857
Query: 475 LR 476
R
Sbjct: 858 CR 859
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 204/417 (48%), Gaps = 28/417 (6%)
Query: 214 KRGKE-----VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+RG+E +H+ +++ G D+ + N L+ +Y K L AR VFDGM +R+ +SW
Sbjct: 68 RRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTC 127
Query: 269 MISGYFENGEYMKGLMLFIMM---REVLVDPDFMTLSSVISASELVGDEKL--GREVHGY 323
++SGY +G + +F M P T SV+ A + G + L +VHG
Sbjct: 128 LVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGL 187
Query: 324 VIKMGFSDDVSVCNPLIKMY--LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
V K ++ + +VCN LI MY S G + ++VF +D+++W ++S Y
Sbjct: 188 VSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVV 247
Query: 382 KAVETYQMMEAEGSM----PDEITIASVLSACACLGNLDLGI--KLHQLAMRTGLISYII 435
+ M + S P+E T S+++A + L + G+ ++ +++G S +
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLY 306
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ + L+ +++ +D+A ++F + ++N ++ +I+GL + S EA+ F +
Sbjct: 307 VGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSF 366
Query: 496 KPNSVTLVSILSACARIG----ALMCGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRM 550
N+ T V +LSA A LM G+E+H H LR G + L N L++MY +CG +
Sbjct: 367 VVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERG--QGALAEE-FFRKMIDSKGNWRKLMGL 603
A F RD +WN +++ + G +GA+ R+ S N+ + GL
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGL 483
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 254/504 (50%), Gaps = 25/504 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC--DRDLFSWNVLIGGYAKA 174
+HS + T +H S+ N L ++ K G + H +F ++ +W LI +++
Sbjct: 119 IHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRS 178
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
+AL+ + RM G+ P+ +TF +L C L G+++H + + + D V
Sbjct: 179 NKPFQALTFFNRM-RTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL- 293
AL+ MY KCG ++ A VFD MP R+ +SWN+MI G+ +N Y + + +F REVL
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF---REVLS 294
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +++SSV+SA + + G++VHG ++K G V V N L+ MY G E+
Sbjct: 295 LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT 354
Query: 354 KVFSRMESKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K+F +DVV+W MI C+ ++A +Q M EG PDE + +S+ A A +
Sbjct: 355 KLFCGGGDRDVVTWNVMIMGCFRCRNF-EQACTYFQAMIREGVEPDEASYSSLFHASASI 413
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L G +H ++TG + I+++L+ MY KC + A +VF + + NV+ WT++I
Sbjct: 414 AALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMI 473
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE-----IHAHAL 526
+ + EA+ F +M+ + P +T VS+LSAC+ G + G + + H +
Sbjct: 474 TVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNI 533
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGAL-- 582
+ G+ ++D+ R GR++ A S E D W LL + +
Sbjct: 534 KPGLEHYA----CMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGR 589
Query: 583 --AEEFFRKMIDSKGNWRKLMGLF 604
AE F+ D+ GN+ L ++
Sbjct: 590 EVAERLFKLEPDNPGNYMLLSNIY 613
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 207/395 (52%), Gaps = 8/395 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM--PK 260
+L + LK ++H ++ A + +N L+ +Y KCG + L+F+ P
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+ ++W +I+ + + + L F MR + P+ T S+++ A G+++
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H + K F +D V L+ MY G+ E VF M +++VSW +MI + + L
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+A+ ++ + + G PD+++I+SVLSACA L LD G ++H ++ GL+ + + N+L
Sbjct: 283 GRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE-ALIFFRKMMLN-LKPN 498
+DMY KC + A ++F D++V++W +I+G R+FE A +F+ M+ ++P+
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGC-FRCRNFEQACTYFQAMIREGVEPD 399
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF- 557
+ S+ A A I AL G IH+H L+ G + + ++L+ MY +CG M A+ F
Sbjct: 400 EASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFR 459
Query: 558 NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ E +V W ++T + + G A + F +M++
Sbjct: 460 ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN 494
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 208/434 (47%), Gaps = 13/434 (2%)
Query: 45 QSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL 104
++ + NT S + +N+L + QAL + + M+ I + ++
Sbjct: 150 HTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPA 209
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C EG +H+++ K + A L M+ K G + A VF +M R+L SW
Sbjct: 210 CAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSW 269
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N +I G+ K + A+ +++ + +G PD + VL C G+ +L GK+VH ++
Sbjct: 270 NSMIVGFVKNKLYGRAIGVFREVLSLG---PDQVSISSVLSACAGLVELDFGKQVHGSIV 326
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
+ G V V N+L+ MY KCG A +F G RD ++WN MI G F + +
Sbjct: 327 KRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACT 386
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
F M V+PD + SS+ AS + G +H +V+K G + + + L+ MY
Sbjct: 387 YFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYG 446
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ + +VF + +VV WT MI+ + ++A++ ++ M EG +P+ IT S
Sbjct: 447 KCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVS 506
Query: 405 VLSACACLGNLDLGIK-LHQLA----MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
VLSAC+ G +D G K + +A ++ GL Y ++D+ + +++A
Sbjct: 507 VLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYA----CMVDLLGRVGRLEEACRFIES 562
Query: 460 IP-DKNVISWTSII 472
+P + + + W +++
Sbjct: 563 MPFEPDSLVWGALL 576
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 156/305 (51%), Gaps = 10/305 (3%)
Query: 296 PDFMTLSSVISASELVGDE------KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
P F SSV L+ + K ++H ++ ++ N L+ +Y G+
Sbjct: 89 PKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSI 148
Query: 350 EEGEKVFSRME--SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+F+ S +VV+WTT+I+ S P +A+ + M G P+ T +++L
Sbjct: 149 HHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILP 208
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
ACA L G ++H L + ++ +A L+DMY+KC + A VF ++P +N++S
Sbjct: 209 ACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVS 268
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
W S+I+G N A+ FR+ +L+L P+ V++ S+LSACA + L GK++H ++
Sbjct: 269 WNSMIVGFVKNKLYGRAIGVFRE-VLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVK 327
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEF 586
G+ ++ N+L+DMY +CG + A F +RDV WN+++ G A +
Sbjct: 328 RGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTY 387
Query: 587 FRKMI 591
F+ MI
Sbjct: 388 FQAMI 392
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 244/500 (48%), Gaps = 79/500 (15%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------FFD------ 178
L N L ++ KFG L A +F KM RD+FSWN L+ YAK+G FD
Sbjct: 60 LHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRD 119
Query: 179 ------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
E+L L++RM G +P YT +L + DL+ GK++H
Sbjct: 120 SVSYNTTIAGFSGNSCPQESLELFKRM-QREGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I + +V + NAL MY KCG++ +AR +FD + K++ +SWN MISGY +NG+
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K + L MR PD +T+S++I+A
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------------- 265
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y G +E +VFS + KD+V WT M+ Y + + A+ + M E PD
Sbjct: 266 --YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T++SV+S+CA L +L G +H ++ GL + +++++ LIDMYSKC ID A VF+ +
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P +NV+SW ++I+G N +AL F M+ KP++VT + ILSAC + G+
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443
Query: 520 E-----IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLT 572
E + H + D + ++++ R GR++ A +++ D W+ LL+
Sbjct: 444 EYFDSITNQHGMT--PTLDHYA--CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499
Query: 573 GYAERGQGALAEEFFRKMID 592
+ +G AE R + +
Sbjct: 500 ICSTKGDIVNAEVAARHLFE 519
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 193/366 (52%), Gaps = 37/366 (10%)
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D+ NAL++ Y K G + + FD MP RD +S+N I+G+ N + L LF M+
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+P T+ S+++AS + D + G+++HG +I F +V + N L MY G E
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ +F + K++VSW MIS Y + P+K + M G MPD++T++++++A
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
Y +C +D+A VF + +K+++ WT+
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTA 292
Query: 471 IILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+++G N R +AL+ F +M+L +++P+S TL S++S+CA++ +L G+ +H ++ G
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + + +AL+DMY +CG + A + FN R+V +WN ++ G A+ G A E F
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412
Query: 589 KMIDSK 594
M+ K
Sbjct: 413 NMLQQK 418
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 40/347 (11%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + NA M+ K G++ A ++F + ++L SWN++I GYAK G ++ + L +M
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM- 247
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
R G +PD ++ +I Y +CG +
Sbjct: 248 ----------------RLSGHMPDQV-------------------TMSTIIAAYCQCGRV 272
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VF ++D + W AM+ GY +NG L+LF M ++PD TLSSV+S+
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+ VHG I G ++++ V + LI MY G ++ VF+ M +++VVSW
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392
Query: 369 TMI-SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAM 426
MI C + D A+E ++ M + PD +T +LSAC ++ G + +
Sbjct: 393 AMIVGCAQNGHDKD-ALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITN 451
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ G+ + ++++ + I++A+ + + D + + W++++
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
>gi|357153150|ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 617
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 215/394 (54%), Gaps = 12/394 (3%)
Query: 134 NAFLSMFV-KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N LS + G L A ++ M +RD +SWNV I G A+AG +AL + M G
Sbjct: 64 NTLLSGYAASSGLLEAALHLLDAMPERDAWSWNVAISGLARAGRLTDALRRFLEMT-RGP 122
Query: 193 VKPDVYTFPCV--LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V+PD +T+ V G L+ +VH ++ G AD V + +Y G +
Sbjct: 123 VQPDAFTYSIVSPCCCGGAGGGLESAWQVHARALKAGAFADACVGTGFVRLYSGLGLIGD 182
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS--AS 308
AR VF+GMP+RD ++WN ++ +GE L ++M V PD T ++V++ A
Sbjct: 183 ARKVFEGMPERDLVAWNVLLDCGMRSGEAGSCLQDLVLMIGGRVQPDEFTFATVVNGLAE 242
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G E + +VH ++K G D+ +CN L+ +Y G + +K+F M KDVVSWT
Sbjct: 243 RFAGLEAM--QVHSVILKSGHLKDLFLCNSLLNVYGRCGYVDLAKKLFEAMPEKDVVSWT 300
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS S A +T+ M+ ++P+ T SV+S+CAC+ +L G + H L ++
Sbjct: 301 ALISGLVASGHQADAFKTFCRMQGAATVPNSFTFGSVVSSCACVNDLGGGRQCHALVIKH 360
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
GL S +A++L+DMYSKC +D A +F +P ++++SW ++I GL N RS AL +
Sbjct: 361 GLESIPTVASSLLDMYSKCAEMDDATRMFDAMPRRDIVSWNAMICGLAQNGRSARALELY 420
Query: 489 RKMML----NLKPNSVTLVSILSACARIGALMCG 518
+M+ ++ PNSVT V +LSAC+ +GA+ G
Sbjct: 421 DEMLRLHQESITPNSVTCVGVLSACSHVGAVEKG 454
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 185/372 (49%), Gaps = 19/372 (5%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ K + +G F+ ++ G +G A VF M +RDL +WNVL+ ++G
Sbjct: 151 VHARALKAGAFADACVGTGFVRLYSGLGLIGDARKVFEGMPERDLVAWNVLLDCGMRSG- 209
Query: 177 FDEALSLYQRM-FWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKE---VHVHVIRFGYEAD 231
EA S Q + +GG V+PD +TF V+ G+ + G E VH +++ G+ D
Sbjct: 210 --EAGSCLQDLVLMIGGRVQPDEFTFATVVN---GLAERFAGLEAMQVHSVILKSGHLKD 264
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+ + N+L+ +Y +CG + A+ +F+ MP++D +SW A+ISG +G F M+
Sbjct: 265 LFLCNSLLNVYGRCGYVDLAKKLFEAMPEKDVVSWTALISGLVASGHQADAFKTFCRMQG 324
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
P+ T SV+S+ V D GR+ H VIK G +V + L+ MY ++
Sbjct: 325 AATVPNSFTFGSVVSSCACVNDLGGGRQCHALVIKHGLESIPTVASSLLDMYSKCAEMDD 384
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM---EAEGSMPDEITIASVLSA 408
++F M +D+VSW MI + +A+E Y M E P+ +T VLSA
Sbjct: 385 ATRMFDAMPRRDIVSWNAMICGLAQNGRSARALELYDEMLRLHQESITPNSVTCVGVLSA 444
Query: 409 CACLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
C+ +G ++ G I Q+ + + L+D++++ +D+A + P K+
Sbjct: 445 CSHVGAVEKGCIYFTQMVNDFHIEPVPEHYSCLVDLFARAGLLDEAEGIISNSPFKH--- 501
Query: 468 WTSIILGLRLNN 479
+IILG LN
Sbjct: 502 -DAIILGTLLNG 512
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L +G A K MQ + ++V C G H++V K
Sbjct: 303 ISGLVASGHQADAFKTFCRMQGAATVPNSFTFGSVVSSCACVNDLGGGRQCHALVIKHGL 362
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
+ ++ L M+ K ++ A +F M RD+ SWN +I G A+ G AL LY
Sbjct: 363 ESIPTVASSLLDMYSKCAEMDDATRMFDAMPRRDIVSWNAMICGLAQNGRSARALELYDE 422
Query: 187 MFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYV 243
M + + P+ T VL C V +++G ++ F E + + L+ ++
Sbjct: 423 MLRLHQESITPNSVTCVGVLSACSHVGAVEKGCIYFTQMVNDFHIEPVPEHYSCLVDLFA 482
Query: 244 KCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ G L A + P K D I +++G
Sbjct: 483 RAGLLDEAEGIISNSPFKHDAIILGTLLNG 512
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 237/473 (50%), Gaps = 14/473 (2%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
GY E ++ H + S S V +G A + MFVK L +A VF +M RD +WN ++
Sbjct: 665 GYCEMVHTHLIKSPFWS--DVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLS 722
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
G+ ++G D+ SL++ M + + PD T ++++ LK K +H IR G +
Sbjct: 723 GFCQSGHTDKVFSLFREM-RLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVD 781
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFI 287
V N I+ Y KCGDL A+LVF+ + + DR +SWN++ + GE +
Sbjct: 782 LQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYR 841
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
+M PD T ++ ++ + GR +H + I +G D+ N I MY G
Sbjct: 842 LMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSG 901
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ +F M S+ VSWT MIS Y D+A+ + M G PD +T+ S++S
Sbjct: 902 DSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLIS 961
Query: 408 ACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
C G+L++G + A G +++ N LIDMYSKC ID+A ++F +K ++
Sbjct: 962 GCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMV 1021
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE---IH 522
+WT++I G LN EA+ F KM+ L+ KPN +T +++L ACA G+L G E I
Sbjct: 1022 TWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 1081
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTG 573
I D + + ++D+ R G++ A + S + D W LL+
Sbjct: 1082 KQVYNISPGLDHY--SCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSA 1132
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 216/435 (49%), Gaps = 6/435 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+WN + E+L L++ M GG +P+ +TFP V + C + + + VH H
Sbjct: 615 AWNFQVREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTH 673
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I+ + +DV V A + M+VKC L A VF+ MP RD +WNAM+SG+ ++G K
Sbjct: 674 LIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKV 733
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
LF MR + PD +T+ ++I ++ KL + +H + I++G +V N I
Sbjct: 734 FSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISA 793
Query: 343 YLSFGNREEGEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y G+ + + VF ++ D VVSW ++ + A Y++M + PD
Sbjct: 794 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLS 853
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T ++ ++C L G +H A+ G I NT I MYSK A +F +
Sbjct: 854 TFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIM 913
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P + +SWT +I G EAL F M + P+ VTL+S++S C + G+L GK
Sbjct: 914 PSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGK 973
Query: 520 EIHAHALRIGVAFDGFLP-NALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAER 577
I A G D + NAL+DMY +CG + A + F N++E+ + W ++ GYA
Sbjct: 974 WIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALN 1033
Query: 578 GQGALAEEFFRKMID 592
G A E F KMID
Sbjct: 1034 GIFLEAMELFSKMID 1048
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 231/470 (49%), Gaps = 21/470 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C +G ++ M+ I D ++ L++ +++ +H+ +
Sbjct: 718 NAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIR 777
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEAL 181
L + N ++S + K GDL A VF + DR + SWN + +A G +A
Sbjct: 778 LGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAF 837
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y R+ KPD+ TF + +C L +G+ +H H I G + D++ +N I+M
Sbjct: 838 GHY-RLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISM 896
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K GD ARL+FD MP R +SW MISGY E G+ + L LF M + V+PD +TL
Sbjct: 897 YSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTL 956
Query: 302 SSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+IS G ++G+ + G G D+V VCN LI MY G+ +E +F
Sbjct: 957 LSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTS 1016
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K +V+WTTMI+ Y + + +A+E + M P+ IT +VL ACA G+L+ G +
Sbjct: 1017 EKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 1076
Query: 421 -LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLR 476
H + + + + ++D+ + +D+ALE+ H + PD + W +++ +
Sbjct: 1077 YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGI--WGALLSACK 1134
Query: 477 LNNRSFEALIFFRKMMLNLKPN----SVTLVSILSAC------ARIGALM 516
+ +R+ + + NL+P V + +I +A ARI ++M
Sbjct: 1135 I-HRNVKIAEQAADSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMM 1183
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 247/526 (46%), Gaps = 55/526 (10%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG- 192
NA LS L +F M RD S+N +I G++ G A+ LY + G
Sbjct: 76 NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P T ++ + D G++ H ++R G+ + V + L+ MY K G + A+
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195
Query: 253 LVFDGM-------------------------------PKRDRISWNAMISGYFENGEYMK 281
VFD M RD I+W M++G+ +NG +
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L F MR + D T S+++A + + G+++H Y+I+ + D+V V + L+
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY + + E F RM K+++SWT +I Y + ++AV + M+ +G PD+ T
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ SV+S+CA L +L+ G + H LA+ +GL+ YI ++N L+ +Y KC I+ A +F ++
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG-K 519
+ +SWT+++ G R+ E + F KM+ ++KP+ VT + +LSAC+R G + G
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAE 576
H+ G+ ++D+Y R GR+K A +F D W LL+
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEA-EEFIKQMPMHPDAIGWGTLLSACRL 554
Query: 577 RGQ---GALAEE--------------FFRKMIDSKGNWRKLMGLFR 605
RG G A E M +KGNW ++ L R
Sbjct: 555 RGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRR 600
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 218/442 (49%), Gaps = 68/442 (15%)
Query: 234 VVNALITMYVKCGDLVRARLVFDGMP-------------------------------KRD 262
++N L+T Y K G RAR VFD P +RD
Sbjct: 43 LLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRD 102
Query: 263 RISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
+S+NA+I+G+ G + + + L+ ++ V P +T+S+++ A+ +GD LGR+
Sbjct: 103 TVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQF 162
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV--------------- 365
H ++++GF + V +PL+ MY G + ++VF M+ K+VV
Sbjct: 163 HCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMV 222
Query: 366 ----------------SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+WTTM++ + + L +A+ ++ M +G D+ T S+L+AC
Sbjct: 223 EEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTAC 282
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L L+ G ++H +RT + + + L+DMYSKC+ I A F ++ KN+ISWT
Sbjct: 283 GALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWT 342
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I+G N S EA+ F +M + + P+ TL S++S+CA + +L G + H AL
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
G+ + NAL+ +Y +CG ++ A F+ D +W L+TGYA+ G+ + F
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLF 462
Query: 588 RKMI--DSKGNWRKLMGLFRKC 607
KM+ D K + +G+ C
Sbjct: 463 EKMLAKDVKPDGVTFIGVLSAC 484
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 15/308 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG QAL + M+ I +D+ +++ C ++G +H+ + +T +V +
Sbjct: 250 NGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFV 309
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A + M+ K + A F +M +++ SW LI GY + G +EA+ ++ M G
Sbjct: 310 GSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEM-QRDG 368
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD +T V+ +C + L+ G + H + G + V NAL+T+Y KCG + A
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD M D++SW A+++GY + G + + LF M V PD +T V+SA G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 313 DEKLG-------REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDV 364
+ G ++ HG V DD C +I +Y G +E E+ +M D
Sbjct: 489 FVEKGCSYFHSMQKDHGIVP----IDDHYTC--MIDLYSRSGRLKEAEEFIKQMPMHPDA 542
Query: 365 VSWTTMIS 372
+ W T++S
Sbjct: 543 IGWGTLLS 550
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 214/385 (55%), Gaps = 13/385 (3%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH HVI+ G + V++ L+ +Y KCG +V AR VFD +P+R+ + W +++GY +N +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ +F M E P TLS ++A + LG++ H ++IK S D S+ N
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L +Y FG+ + K F KDV+SWTT+IS + + + M E P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+ T+ SVLS C+ + + DLG+++H L+ + G S + I N+L+ +Y KC CID+A +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 459 QIPDKNVISWTSIILG----LRLNNRSF-------EALIFFRKMMLN-LKPNSVTLVSIL 506
++ KN+I+W ++I G + L +F EAL + K+ + KP+ TL SIL
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVS 565
+ C+R+ AL G++IHA ++ G D + AL+DMY +CG ++ A F + + R +
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361
Query: 566 AWNILLTGYAERGQGALAEEFFRKM 590
+W ++T +A GQ A + F M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDM 386
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 252/509 (49%), Gaps = 24/509 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ V KT +H + + ++++ K G + +A VF + R++ W L+ GY +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+ A+ ++ M G P +T L C + + GK+ H +I++ D + N
Sbjct: 62 PEVAVEVFGDMLESGSF-PSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL ++Y K G L + F ++D ISW +IS +NG GL LFI M V+P
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ TL+SV+S + LG +VH K+G ++ + N L+ +YL G +E + +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 357 SRMESKDVVSWTTMISCYEGSV-----------LPDKAVETYQMMEAEGSMPDEITIASV 405
+RME K++++W MI+ + ++ +A+ Y + G PD T++S+
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
L+ C+ L L+ G ++H +++G +S +++ L+DMY KC I++A + F + + +
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGAL---MCGKEI 521
ISWTS+I + +S AL F M L +PN +T V +L+AC+ G + + EI
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQ 579
+I D + L+DM+VR GR+ A++ E + W +L+ G G
Sbjct: 421 MQKEYKIKPVMDHY--GCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478
Query: 580 GAL----AEEFFRKMIDSKGNWRKLMGLF 604
L AE+ + S + L+ ++
Sbjct: 479 EELGFYAAEQLLKLKPRSTETYVVLLNMY 507
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 204/408 (50%), Gaps = 19/408 (4%)
Query: 114 GLYLHSVVSK-TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G H+ + K +SH S +GNA S++ KFG L + F + ++D+ SW +I
Sbjct: 100 GKQFHAFIIKYRISHDS-SIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACG 158
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G L L+ M + V+P+ +T VL C + G +VH + G+E+++
Sbjct: 159 DNGRAGMGLRLFIEMLF-ENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNL 217
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK----------- 281
+ N+L+ +Y+KCG + A+ +F+ M ++ I+WNAMI+G+ + + K
Sbjct: 218 RITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTE 277
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L +++ + PD TLSS+++ + + G ++H IK GF DV V L+
Sbjct: 278 ALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVD 337
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ E K F M ++ ++SWT+MI+ + A++ ++ M G P++IT
Sbjct: 338 MYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQIT 397
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEVFHQI 460
VL+AC+ G +D ++ ++ + I ++ L+DM+ + +D+A +V ++
Sbjct: 398 FVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRM 457
Query: 461 P-DKNVISWTSIILGLRLNNRSFEALIFF-RKMMLNLKPNSVTLVSIL 506
+ N W +I G R N E L F+ + +L LKP S +L
Sbjct: 458 DVEPNEFIWLLLIAGCR--NHGNEELGFYAAEQLLKLKPRSTETYVVL 503
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 17/302 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L+ M N+ ++ L +++ LC + D G+ +HS+ +K ++R+
Sbjct: 160 NGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRI 219
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF-----------DEAL 181
N+ + +++K G + A +F +M ++L +WN +I G+A+A EAL
Sbjct: 220 TNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEAL 279
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+Y ++ G KPD++T +L C + L++G+++H I+ G+ +DV V AL+ M
Sbjct: 280 GMYLKLNR-SGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDM 338
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCG + RAR F M R ISW +MI+ + +G+ L LF MR P+ +T
Sbjct: 339 YDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITF 398
Query: 302 SSVISASELVG--DEKLGR-EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
V++A G DE L E+ K+ D C L+ M++ G +E V R
Sbjct: 399 VGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGC--LVDMFVRLGRLDEAFDVIKR 456
Query: 359 ME 360
M+
Sbjct: 457 MD 458
>gi|449447755|ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 286/587 (48%), Gaps = 20/587 (3%)
Query: 14 LRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNS---RLNEL 70
++ P ++I S + K F+ K+A ++ + TKNP++ +
Sbjct: 37 IKSTTDTPPSKIKIVSKFRNRKRPTFAEKDA-------FPSSLPLHTKNPHAIYEDVQRF 89
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVVSKTMSHL 128
L++AL +D + + I V+ +L+ C + Y + ++ H ++ ++
Sbjct: 90 ARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNE 149
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD--EALSLYQR 186
+R + M+ G L A +F + + ++ WN L+ G AG D LS Y
Sbjct: 150 FIR--TRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAE 207
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +G V+ +VY+F ++++ G +G + H +I+ G + L+ MY KCG
Sbjct: 208 MRRLG-VELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCG 266
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ AR +F + +RD + W ++I+G+ N + L M + + P+ + L++++
Sbjct: 267 KIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILP 326
Query: 307 ASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ +LG+EVH YVIK +S + + + LI MY G+ G VF ++ +
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAI 386
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
WT ++S Y + ++AV + M+ EG PD +T+A++L CA L L G ++H A
Sbjct: 387 CWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYA 446
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
M+ + + I ++L+ MYSKC +D L++F+ + +NVI WT++I N EA+
Sbjct: 447 MKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 486 IFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR M L+ +P++VT+ IL C+ L GKEIH L+ F+ L+ +Y
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLY 566
Query: 545 VRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG +K A F + + W ++ Y E G+ A + F +M
Sbjct: 567 GKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRM 613
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 217/430 (50%), Gaps = 3/430 (0%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+ L + ++ + N+++ + +GL H ++ K S LG + M+ K G
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ A +FG++ +RD+ W +I G+A EAL +RM G++P+ +L
Sbjct: 268 IKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMI-DDGIRPNSVILTTILP 326
Query: 206 TCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
G + + G+EVH +VI+ Y + + +ALI MY KCGD+ R VF +R+ I
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAI 386
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
W A++SGY NG + + I M++ PD +T+++++ + + G+E+H Y
Sbjct: 387 CWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYA 446
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+K F +VS+ + L+ MY G + K+F+ ME ++V+ WT MI Y + P +A+
Sbjct: 447 MKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ ++ M+ PD +T++ +L C+ L +G ++H ++ ++ L+ +Y
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLY 566
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLV 503
KC + A VF IP K ++WT+II + EA+ F +M + PN T
Sbjct: 567 GKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFK 626
Query: 504 SILSACARIG 513
+LS C G
Sbjct: 627 VVLSICKEAG 636
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 213/438 (48%), Gaps = 24/438 (5%)
Query: 171 YAKAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
+A+ EAL++ M +V G+ + TF ++ C + K++H H+ G
Sbjct: 89 FARQNKLKEALTI---MDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGL 145
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG--EYMKGLMLF 286
E + + L+ MY CG L A+ +FD + WNA++ G G +Y L +
Sbjct: 146 ENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTY 205
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR + V+ + + +++I + G + HG +IK G + L+ MY
Sbjct: 206 AEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKC 265
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G + ++F + +DVV W ++I+ + + L +A+E + M +G P+ + + ++L
Sbjct: 266 GKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTIL 325
Query: 407 SACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+ LG ++H ++T S I I + LIDMY KC I VF+ ++N
Sbjct: 326 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 385
Query: 466 ISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIH 522
I WT+++ G LN R + ++I+ ++ +P+ VT+ +IL CA++ AL GKEIH
Sbjct: 386 ICWTALMSGYALNGRLEQAVRSVIWMQQE--GFRPDIVTVATILPVCAQLRALRPGKEIH 443
Query: 523 AHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
A+A++ + FLPN +L+ MY +CG M FN E R+V W ++ Y E
Sbjct: 444 AYAMK-----NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIE 498
Query: 577 RGQGALAEEFFRKMIDSK 594
A + FR M SK
Sbjct: 499 NQCPHEAIDIFRAMQLSK 516
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 6/314 (1%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ V KT S+ + + +A + M+ K GD+G VF +R+ W L+ GYA
Sbjct: 337 GQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYA 396
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G ++A+ + + W+ G +PD+ T +L C + L+ GKE+H + ++ +
Sbjct: 397 LNGRLEQAV---RSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP 453
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V +V++L+ MY KCG + +F+GM +R+ I W AMI Y EN + + +F M+
Sbjct: 454 NVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQ 513
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
PD +T+S ++ K+G+E+HG V+K F V L+K+Y G +
Sbjct: 514 LSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVK 573
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ VF + K ++WT +I Y S +A++ + M + G P+ T VLS C
Sbjct: 574 MAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICK 633
Query: 411 CLGNLDLGIKLHQL 424
G +D +++ +L
Sbjct: 634 EAGFVDEALRIFKL 647
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
LNG LEQA++ + MQ+ D + ++ +C R G +H+ K +V
Sbjct: 396 ALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNV 455
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ ++ + M+ K G + + +F M R++ W +I Y + EA+ +++ M +
Sbjct: 456 SIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAM-QL 514
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+PD T +L C LK GKE+H V++ +E V L+ +Y KCG +
Sbjct: 515 SKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKM 574
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A++VF+ +P + ++W A+I Y E+GE+ + + LF MR + P+ T V+S +
Sbjct: 575 AKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKE 634
Query: 311 VG--DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
G DE L R ++ + +I + FG EE + ++E++ V++
Sbjct: 635 AGFVDEAL-RIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRCKEQVETEGAVTF 692
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 233/490 (47%), Gaps = 55/490 (11%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LS + +F M +RD S+N LI G++ G ++ LY+ + V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P T ++ + D G VH V+R G+ A V + L+ MY K G + AR
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 254 VFDGMPK-------------------------------RDRISWNAMISGYFENGEYMKG 282
VF M RD I+W M++G +NG ++
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L +F MR V D T S+++A + + G+++H Y+ + + D+V V + L+ M
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + E VF RM ++++SWT MI Y + ++AV + M+ +G PD+ T+
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SV+S+CA L +L+ G + H LA+ +GL+ YI ++N L+ +Y KC I+ A +F ++
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+ +SWT+++ G ++ E + F KM+ N LKP+ VT + +LSAC+R G + G +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 522 HAHALRIGVAFD------GFLP-----NALLDMYVRCGRMKPAWNQFNS--NERDVSAWN 568
FD G +P ++D+Y R GR K A + D W
Sbjct: 503 ----------FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552
Query: 569 ILLTGYAERG 578
LL+ RG
Sbjct: 553 TLLSSCRLRG 562
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 230/468 (49%), Gaps = 68/468 (14%)
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVD-VVNALITMYVKCGDLVRARLVFD---------- 256
GG ++ VH +++ +A ++N L+T Y K G L RAR VFD
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 257 ---------------------GMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
MP+RD +S+NA+I+G+ G + + L+ ++RE V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P +TLS++I + + D LG VH V+++GF V +PL+ MY G + +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 355 VFSRMESK-------------------------------DVVSWTTMISCYEGSVLPDKA 383
VF ME+K D ++WTTM++ + L +A
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ ++ M AEG D+ T S+L+AC L L+ G ++H RT + + + L+DM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC+ I A VF ++ +N+ISWT++I+G N S EA+ F +M ++ +KP+ TL
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
S++S+CA + +L G + H AL G+ + NAL+ +Y +CG ++ A F+
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
D +W L+TGYA+ G+ + F KM+ + K + +G+ C
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 3/359 (0%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V + M +V + N ++ ++ + A +F M DRD +W ++ G + G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L +++RM GV D YTF +L CG + L+ GK++H ++ R YE +V V +AL+
Sbjct: 263 LDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC + A VF M R+ ISW AMI GY +N + + F M+ + PD T
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L SVIS+ + + G + H + G ++V N L+ +Y G+ E+ ++F M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D VSWT +++ Y + ++ ++ M A G PD +T VLSAC+ G ++ G
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD 501
Query: 421 -LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ G++ +ID+YS+ +A E Q+P + W +++ RL
Sbjct: 502 YFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 15/311 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG +AL M+ + +D+ +++ C +EG +H+ +++T +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDN 312
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G+A + M+ K + A VF +M R++ SW +I GY + +EA+ + M
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-Q 371
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G+KPD +T V+ +C + L+ G + H + G + V NAL+T+Y KCG +
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +FD M D++SW A+++GY + G+ + + LF M + PD +T V+SA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 310 LVGDEKLG-------REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
G + G ++ HG V DD C +I +Y G +E E+ +M S
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVP----IDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 362 KDVVSWTTMIS 372
D W T++S
Sbjct: 546 PDAFGWATLLS 556
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 280/614 (45%), Gaps = 81/614 (13%)
Query: 62 NPNS-----RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
NP S R++ LC G + +AL + M N+ + + +++ C ++R G
Sbjct: 27 NPPSISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQ 86
Query: 117 LHSVVSKTMSHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H+ + K + + + + K L A +F K+ R++FSW +IG +
Sbjct: 87 IHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRI 146
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G + AL + M G+ PD + P V + CG + + G+ VH +V + G V V
Sbjct: 147 GLVEGALMGFVEMLE-NGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFV 205
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
++L MY KCG L AR VFD +P R ++WNA++ GY +NG + + L MR +
Sbjct: 206 ASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGI 265
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+P +T+S+ +SAS +G + G++ H I G D + ++ Y G E E
Sbjct: 266 EPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEM 325
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F RM KDVV+W +IS Y L + A+ Q+M D +T++S++SA A N
Sbjct: 326 IFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHN 385
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK----------- 463
L LG ++ +R G +S I++A+T ++MY+KC I A +VF+ +K
Sbjct: 386 LKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAA 445
Query: 464 ------------------------NVISWTSIILGLRLNNR------------------- 480
NVI+W S+IL L N +
Sbjct: 446 YAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGISPN 505
Query: 481 ----------------SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
S EA+++ RKM + L+ N ++ LSACA + +L G+ IH
Sbjct: 506 LISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHG 565
Query: 524 HALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGA 581
+ +R + +L+DMY +CG + A F S ++ +N +++ YA G
Sbjct: 566 YIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVK 625
Query: 582 LAEEFFRKMIDSKG 595
A +R + + G
Sbjct: 626 EATALYRSLDEDVG 639
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 216/521 (41%), Gaps = 85/521 (16%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG ++A++ L +M+ I + + G +EG H++ L L
Sbjct: 247 NGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 306
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L+ + K G + +A +F +M ++D+ +WN+LI GY + G ++A+ + Q M G
Sbjct: 307 GTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRR-GN 365
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY------------------------ 228
+ D T ++ +LK GKEV + IR G+
Sbjct: 366 LNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAK 425
Query: 229 -------EADVDVVNALITMYVKCGDLVRARLVF-----DGMPKRDRISWNAMISGYFEN 276
E D+ + N L+ Y + G A +F +G+P + I+WN++I N
Sbjct: 426 KVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPP-NVITWNSVILSLLRN 484
Query: 277 GEYMKGLMLFIMMREVLVDPDFMT-----------------------------------L 301
G+ + +F+ M+ + P+ ++ +
Sbjct: 485 GQVNEAKDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSI 544
Query: 302 SSVISASELVGDEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+ +SA + GR +HGY+I+ S VS+ L+ MY G+ + E+VF
Sbjct: 545 TVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKL 604
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGI 419
++ + MIS Y +A Y+ ++ + G PD ITI +VLSAC G+++ I
Sbjct: 605 YSELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAI 664
Query: 420 KL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ + AM+ L Y ++D+ + +KAL + ++P K +L
Sbjct: 665 HIFTDMVSKHAMKPCLEHY----GLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLA 720
Query: 475 LRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGA 514
E + + + +L +P NS V+I + A G+
Sbjct: 721 SCNKQHKSELVEYLSRHLLESEPENSGNYVTISNVYAVEGS 761
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
+N L NG E+A+ YL MQE + ++ ++ + C G +H + +
Sbjct: 513 MNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQH 572
Query: 127 HLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
H S V + + + M+ K GD+ A VFG +L +N +I YA G EA +LY+
Sbjct: 573 HSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYR 632
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMYVK 244
+ G++PD T VL C D+ + + ++ + + ++ ++ +
Sbjct: 633 SLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLLAS 692
Query: 245 CGDLVRARLVFDGMPKR 261
G+ +A + + MP +
Sbjct: 693 AGETEKALRLIEEMPYK 709
>gi|449482323|ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 286/587 (48%), Gaps = 20/587 (3%)
Query: 14 LRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNS---RLNEL 70
++ P ++I S + K F+ K+A ++ + TKNP++ +
Sbjct: 37 IKSTTDTPPSKIKIVSKFRNRKRPTFAEKDA-------FPSSLPLHTKNPHAIYEDVQRF 89
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG--YDEGLYLHSVVSKTMSHL 128
L++AL +D + + I V+ +L+ C + Y + ++ H ++ ++
Sbjct: 90 ARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNE 149
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD--EALSLYQR 186
+R + M+ G L A +F + + ++ WN L+ G AG D LS Y
Sbjct: 150 FIR--TRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAE 207
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +G V+ +VY+F ++++ G +G + H +I+ G + L+ MY KCG
Sbjct: 208 MRRLG-VELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCG 266
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ AR +F + +RD + W ++I+G+ N + L M + + P+ + L++++
Sbjct: 267 KIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILP 326
Query: 307 ASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ +LG+EVH YVIK +S + + + LI MY G+ G VF ++ +
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAI 386
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
WT ++S Y + ++AV + M+ EG PD +T+A++L CA L L G ++H A
Sbjct: 387 CWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYA 446
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
M+ + + I ++L+ MYSKC +D L++F+ + +NVI WT++I N EA+
Sbjct: 447 MKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 486 IFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR M L+ +P++VT+ IL C+ L GKEIH L+ F+ L+ +Y
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLY 566
Query: 545 VRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG +K A F + + W ++ Y E G+ A + F +M
Sbjct: 567 GKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRM 613
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 217/430 (50%), Gaps = 3/430 (0%)
Query: 86 MQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
M+ L + ++ + N+++ + +GL H ++ K S LG + M+ K G
Sbjct: 208 MRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGK 267
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
+ A +FG++ +RD+ W +I G+A EAL +RM G++P+ +L
Sbjct: 268 IKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMI-DDGIRPNSVILTTILP 326
Query: 206 TCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRI 264
G + + G+EVH +VI+ Y + + +ALI MY KCGD+ R VF +R+ I
Sbjct: 327 VIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAI 386
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
W A++SGY NG + + I M++ PD +T+++++ + + G+E+H Y
Sbjct: 387 CWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYA 446
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+K F +VS+ + L+ MY G + K+F+ ME ++V+ WT MI Y + P +A+
Sbjct: 447 MKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ ++ M+ PD +T++ +L C+ L +G ++H ++ ++ L+ +Y
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLY 566
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLV 503
KC + A VF IP K ++WT+II + EA+ F +M + PN T
Sbjct: 567 GKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFK 626
Query: 504 SILSACARIG 513
+LS C G
Sbjct: 627 VVLSICKEAG 636
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 213/438 (48%), Gaps = 24/438 (5%)
Query: 171 YAKAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
+A+ EAL++ M +V G+ + TF ++ C + K++H H+ G
Sbjct: 89 FARQNKLKEALTI---MDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGL 145
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG--EYMKGLMLF 286
E + + L+ MY CG L A+ +FD + WNA++ G G +Y L +
Sbjct: 146 ENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTY 205
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR + V+ + + +++I + G + HG +IK G + L+ MY
Sbjct: 206 AEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKC 265
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G + ++F + +DVV W ++I+ + + L +A+E + M +G P+ + + ++L
Sbjct: 266 GKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTIL 325
Query: 407 SACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+ LG ++H ++T S I I + LIDMY KC I VF+ ++N
Sbjct: 326 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 385
Query: 466 ISWTSIILGLRLNNR---SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIH 522
I WT+++ G LN R + ++I+ ++ +P+ VT+ +IL CA++ AL GKEIH
Sbjct: 386 ICWTALMSGYALNGRLEQAVRSVIWMQQE--GFRPDIVTVATILPVCAQLRALRPGKEIH 443
Query: 523 AHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
A+A++ + FLPN +L+ MY +CG M FN E R+V W ++ Y E
Sbjct: 444 AYAMK-----NCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIE 498
Query: 577 RGQGALAEEFFRKMIDSK 594
A + FR M SK
Sbjct: 499 NQCPHEAIDIFRAMQLSK 516
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 162/314 (51%), Gaps = 6/314 (1%)
Query: 114 GLYLHSVVSKTMSH-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ V KT S+ + + +A + M+ K GD+G VF +R+ W L+ GYA
Sbjct: 337 GQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYA 396
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G ++A+ + + W+ G +PD+ T +L C + L+ GKE+H + ++ +
Sbjct: 397 LNGRLEQAV---RSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP 453
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V +V++L+ MY KCG + +F+GM +R+ I W AMI Y EN + + +F M+
Sbjct: 454 NVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQ 513
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
PD +T+S ++ K+G+E+HG V+K F V L+K+Y G +
Sbjct: 514 LSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVK 573
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ VF + K ++WT +I Y S +A++ + M + G P+ T VLS C
Sbjct: 574 MAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICK 633
Query: 411 CLGNLDLGIKLHQL 424
G +D +++ +L
Sbjct: 634 EAGFVDEALRIFKL 647
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 5/305 (1%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LNG LEQA++ + MQ+ D + ++ +C R G +H+ K +V
Sbjct: 397 LNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVS 456
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ ++ + M+ K G + + +F M R++ W +I Y + EA+ +++ M +
Sbjct: 457 IVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAM-QLS 515
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+PD T +L C LK GKE+H V++ +E V L+ +Y KCG + A
Sbjct: 516 KHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMA 575
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++VF+ +P + ++W A+I Y E+GE+ + + LF MR + P+ T V+S +
Sbjct: 576 KMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEA 635
Query: 312 G--DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS-WT 368
G DE L R ++ + +I + FG EE + ++E++ V+ W
Sbjct: 636 GFVDEAL-RIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRCKEQVETEGAVTFWK 694
Query: 369 TMISC 373
+C
Sbjct: 695 PSFNC 699
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 253/496 (51%), Gaps = 26/496 (5%)
Query: 114 GLYLHSVVSKTMSHLSVRLGN------AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
G +H +VS+ S RL N ++M+ G + VF + ++LF WN +
Sbjct: 100 GRKIHQLVSE-----SARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAV 154
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
I Y++ + L ++ +M G+ PD +TFPCV++ C GV +++ G VH V++
Sbjct: 155 ISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTR 214
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
DV V NAL++ Y G + A VF MP+R+ +SWN+MI + +NG + +L
Sbjct: 215 LVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLG 274
Query: 288 MM----REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
M E+ PD TL++V+ + +G+ VHG +K+ +V V N L+ MY
Sbjct: 275 QMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMY 334
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEIT 401
G + + +F +K+VVSW TM+ + + K + + M A G DE+T
Sbjct: 335 SKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVT 394
Query: 402 IASVLSAC---ACLGNLDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVF 457
I + + C + L NL +LH +++ + + ++AN + Y+KC + A VF
Sbjct: 395 ILNAVPVCFEESVLPNLK---ELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALM 516
I K V SW ++I G ++ +L +F+ L P+ T+ S+LSAC++I +L
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
GKE+H +R + D F+ +LL +Y+ CG + A F++ E + + +WN ++ GY
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYL 571
Query: 576 ERGQGALAEEFFRKMI 591
+ G A FR+M+
Sbjct: 572 QNGFPERALSLFRQMV 587
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 257/521 (49%), Gaps = 13/521 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSM----QELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
NS + NG E+ L M E+ D L ++ +C R G +H
Sbjct: 254 NSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHG 313
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ K V + NA + M+ K G + A +F ++++ SWN ++GG++ AG +
Sbjct: 314 LAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHK 373
Query: 180 ALSLYQRMFWVGG-VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NA 237
L ++M GG ++ D T + C L KE+H + ++ + + ++V NA
Sbjct: 374 TFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANA 433
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
+ Y KCG L A VF + + SWNA+I GY ++ + L + M+ + PD
Sbjct: 434 FVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPD 493
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T+ S++SA + KLG+EVHG +I+ D V L+ +Y+ G +F
Sbjct: 494 LFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFD 553
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
ME K +VSW TM++ Y + P++A+ ++ M G P EI++ SV AC+ L +L L
Sbjct: 554 AMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRL 613
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G + H A++ L IA ++IDMY+K + ++ +VF+ + +++V SW ++++G +
Sbjct: 614 GREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGI 673
Query: 478 NNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
+ R+ EA+ F +M P+ +T + +L+AC G + G + ++ + L
Sbjct: 674 HGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGL-TYLDQMKTLFGMNPTL 732
Query: 537 PN--ALLDMYVRCGRMKPAW---NQFNSNERDVSAWNILLT 572
+ ++DM VR G++ A + S E V WN LL+
Sbjct: 733 KHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLS 773
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 154/294 (52%), Gaps = 8/294 (2%)
Query: 313 DEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D +LGR++H V + S+D +C +I MY G+ ++ VF + K++ W +I
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
S Y + L +E + +M+ G +PD T V+ ACA + + +G+ +H L ++T L
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++N L+ Y + AL VF +P++N++SW S+I N S E + +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 491 MM-----LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
MM + P+ TL ++L CAR + GK +H A+++ + + + NAL+DMY
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
+CG + A F +N ++V +WN ++ G++ G + R+M+ G+ R
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLR 389
>gi|255586231|ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526307|gb|EEF28615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 617
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 245/491 (49%), Gaps = 50/491 (10%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
Y H++ + M H ++ NA L+ + K G+L +A +F +M +R++ SWN LI +
Sbjct: 59 YAHNLFHQ-MPHKNIYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGR 117
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+AL +Y M W G+ P +T +L CG + +++ G++ H +++ G + +V V
Sbjct: 118 LEQQALDVYNEMIW-EGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVS 176
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NAL+++Y KCG + A +F+ M + + +++ AM+SG+ + ++ L +F +M +
Sbjct: 177 NALLSVYSKCGLVRDAVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGIC 236
Query: 296 PDFMTLSSVISASELVG-----------DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
D ++LSSV+ G LG+ HG IK+GF D+ +CN L+ MY
Sbjct: 237 IDSVSLSSVLGVCTKGGCGESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYA 296
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ + E+VF+ + VVSW MI+ Y KA+E Q M++ G PDE+T +
Sbjct: 297 KDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYIN 356
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
+L+AC G++++G ++F +
Sbjct: 357 MLTACVRSGDIEIG-----------------------------------RQIFDCMACPG 381
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
V SW ++ G EA+ FR+M N+KP+ TL ILS+CA + L GK++HA
Sbjct: 382 VSSWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHA 441
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
+ + D ++ + L+ MY +CG+M A F +++D WN ++ G +
Sbjct: 442 ISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNE 501
Query: 583 AEEFFRKMIDS 593
A FF++M S
Sbjct: 502 ALAFFQQMRQS 512
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 157/574 (27%), Positives = 271/574 (47%), Gaps = 80/574 (13%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVR-------------------- 103
N+ L E C G+L+ A + M E NI + + LVR
Sbjct: 76 NAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLM 135
Query: 104 -----------LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
C + G H+++ K +V + NA LS++ K G + A +
Sbjct: 136 PTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRL 195
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC--GGV 210
F +M + + ++ ++ G+ + EAL ++ R+ G+ D + VL C GG
Sbjct: 196 FEEMQEPNEVTYTAMMSGFTQTDRVVEALEMF-RLMCRQGICIDSVSLSSVLGVCTKGGC 254
Query: 211 PDLKR---------GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+ + GK H I+ G+E+D+ + N+L+ MY K GD+ A VF +P+
Sbjct: 255 GESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEM 314
Query: 262 DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVH 321
+SWN MI+GY + + K + M+ +PD +T ++++A GD ++GR+
Sbjct: 315 SVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQ-- 372
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPD 381
+F M V SW M+S Y +
Sbjct: 373 ---------------------------------IFDCMACPGVSSWNGMLSGYFQIENHN 399
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A++ ++ M+ + PD T+A +LS+CA + L+ G ++H ++ + I +A+ LI
Sbjct: 400 EAIKLFREMQFQNVKPDRTTLAIILSSCAGMELLEAGKQVHAISQKAAFHEDIYVASGLI 459
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
MYSKC +D A +F +I ++ + W S+I GL LN+ EAL FF++M + + P
Sbjct: 460 GMYSKCGKMDIADCIFKKISKQDTVCWNSMIAGLSLNSLDNEALAFFQQMRQSGMSPTQF 519
Query: 501 TLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-S 559
+ +ILS CA++ +L+ GK+IHA + G D ++ +AL+DMY +CG + A F+
Sbjct: 520 SYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSALVDMYCKCGEVGEARQFFDIM 579
Query: 560 NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ ++ WN ++ GYA+ G G A +R MI+S
Sbjct: 580 SSKNTVTWNEMIHGYAQNGHGHEAVCLYRDMIES 613
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 201/431 (46%), Gaps = 77/431 (17%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L++C GK +H + R G D ++N LI Y KC ++ A +F MP ++
Sbjct: 12 LLQSCIDKKAHLSGKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKN 71
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMRE-----------VLVD---------------- 295
SWNA+++ Y + G LF M E LV
Sbjct: 72 IYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIW 131
Query: 296 ----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
P TL+S++SA + + + GR+ H ++K+G ++V V N L+ +Y G +
Sbjct: 132 EGLMPTHFTLASILSACGTLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRD 191
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC-- 409
++F M+ + V++T M+S + + +A+E +++M +G D ++++SVL C
Sbjct: 192 AVRLFEEMQEPNEVTYTAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTK 251
Query: 410 ACLGNLD---------LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
G D LG H LA++ G S + + N+L+DMY+K +D A EVF +
Sbjct: 252 GGCGESDQSDGSLRNALGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANL 311
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P+ +V+SW +I G +S +A+ + ++M +P+ VT +++L+AC R G + G+
Sbjct: 312 PEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGR 371
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQ 579
+I FD + C P VS+WN +L+GY +
Sbjct: 372 QI----------FD----------CMAC----PG----------VSSWNGMLSGYFQIEN 397
Query: 580 GALAEEFFRKM 590
A + FR+M
Sbjct: 398 HNEAIKLFREM 408
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
L ++L +C A + GK +HA RIG++ D FL N L++ Y +C M A N F+
Sbjct: 9 LANLLQSCIDKKAHLSGKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMP 68
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+++ +WN +LT Y + G A F +M
Sbjct: 69 HKNIYSWNAILTEYCKAGNLQNAHRLFSEM 98
>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 234/425 (55%), Gaps = 9/425 (2%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLK-RGKEVHV 221
WN++I Y+K E+L L+ +M G D YTF V C P L+ G+ VH
Sbjct: 122 WNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHG 181
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE-YM 280
V++ GYE+D+ V N+L+ MY +V A+ VFD MP+RD I+W +++ GY GE Y
Sbjct: 182 MVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYN 241
Query: 281 KGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ L F M+ V P+ L S++SA +G G+ +H Y+ K ++ L
Sbjct: 242 EALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTAL 301
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I MY G + +VF + +D+++WT+MIS L + + T+ M AEG PD+
Sbjct: 302 IDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDD 361
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
IT+ VL+ C+ G ++ I +H + +++G S + + N++I+M S ++ A +VF+Q
Sbjct: 362 ITLLGVLNGCSHSGLVEEEI-VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQ 420
Query: 460 IPDKNVISWTSIILGLRLNNRSFEA-LIFFRKMMLN--LKPNSVTLVSILSACARIGALM 516
+ +++V SWTS++ G + A L FF M+ + + PN LV +LSACA +GAL
Sbjct: 421 MSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALD 480
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G IH + +IG+ + AL+DMY +CGR+ A FN +RDV ++ +++G +
Sbjct: 481 QGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLS 540
Query: 576 ERGQG 580
G G
Sbjct: 541 YHGLG 545
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 205/383 (53%), Gaps = 12/383 (3%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
RGY E + H +V K + +GN+ ++M+ F + A VF +M RD+ +W ++
Sbjct: 173 RGYGENV--HGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVV 230
Query: 169 GGYAKAG-FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
GYA G F++EAL + M VKP+ +L C + L +GK +HV++ +
Sbjct: 231 KGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNR 290
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
++ ALI MY KCG + AR VFDG+ KRD ++W +MISG +G + L F
Sbjct: 291 ILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFS 350
Query: 288 MMREVLVDPDFMTLSSVI---SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
M PD +TL V+ S S LV +E VHG V+K GF ++ V N +I M
Sbjct: 351 EMLAEGFKPDDITLLGVLNGCSHSGLVEEEI----VHGMVVKSGFESNLYVGNSVINMCS 406
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY--QMMEAEGSMPDEITI 402
F E+ KVF++M +DV SWT+++ Y D+A T+ M+ + P+E +
Sbjct: 407 VFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVL 466
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
VLSACA LG LD G +H + G+ I+ LIDMY+KC ID A VF+ I
Sbjct: 467 VCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICK 526
Query: 463 KNVISWTSIILGLRLNNRSFEAL 485
++V+S+TS+I GL + +AL
Sbjct: 527 RDVLSFTSMISGLSYHGLGKDAL 549
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 10/390 (2%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAM 269
P L + K++H V+ G + ++ LI Y+ C +L AR+VFD P I WN M
Sbjct: 66 PSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLM 125
Query: 270 ISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIK 326
I Y + + L LF M D T + V +A S G VHG V+K
Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVK 185
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE-GSVLPDKAVE 385
G+ D+ V N L+ MY F + ++VF M +DV++WT+++ Y ++A++
Sbjct: 186 DGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQ 245
Query: 386 TYQ-MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ M+ + P+E + S+LSACA LG LD G +H + ++ I+ LIDMY
Sbjct: 246 CFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMY 305
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLV 503
+KC ID A VF + +++++WTS+I GL ++ E L F +M+ KP+ +TL+
Sbjct: 306 AKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLL 365
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NER 562
+L+ C+ G L+ + +H ++ G + ++ N++++M RM+ A FN +ER
Sbjct: 366 GVLNGCSHSG-LVEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSER 424
Query: 563 DVSAWNILLTGYAERGQGALAE-EFFRKMI 591
DV +W LL GYA+ G+ A FF M+
Sbjct: 425 DVFSWTSLLGGYAKHGEMDRASLTFFCNML 454
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 10/300 (3%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEG 376
+++H V+ G + + S+ PLI Y+ N VF + S + W MI Y
Sbjct: 72 KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSK 131
Query: 377 SVLPDKAVETYQMMEAEG--SMPDEITIASVLSACACLGNL-DLGIKLHQLAMRTGLISY 433
+ +++ + M A G + D+ T V +AC+ L G +H + ++ G S
Sbjct: 132 TPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESD 191
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF-EALIFFRKMM 492
I + N+L++MYS + A VF ++P ++VI+WTS++ G + + EAL F M+
Sbjct: 192 IFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFNDML 251
Query: 493 LN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ +KPN LVSILSACA +GAL GK IH + + + + AL+DMY +CGR+
Sbjct: 252 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 311
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A F+ ++RD+ W +++G + G GA F +M+ K + L+G+ C
Sbjct: 312 DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 371
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 36/389 (9%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
+E LV+++ C D+G ++H + K LS + A + M+ K G + A VF
Sbjct: 259 NEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVF 318
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+ RDL +W +I G + G E L + M G KPD T VL C L
Sbjct: 319 DGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEML-AEGFKPDDITLLGVLNGCSH-SGL 376
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ VH V++ G+E+++ V N++I M + AR VF+ M +RD SW +++ GY
Sbjct: 377 VEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGY 436
Query: 274 FENGEYMKGLMLFI--MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
++GE + + F M+ + V+P+ L V+SA +G G +H Y+ K+G
Sbjct: 437 AKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQ 496
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
++ LI MY G + +VF+ + +DV+S+T+MIS +
Sbjct: 497 SSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISG----------------LS 540
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
G D + +S+L+ L G+ I ID+ + ++
Sbjct: 541 YHGLGKDALRGSSILANMESLW---------------GIAPKIEHYGCYIDLLGRAGYLE 585
Query: 452 KALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ALEV +P + +++ W +++ R+++
Sbjct: 586 RALEVVKTMPMEPDIVIWRALLSASRIHH 614
>gi|255539985|ref|XP_002511057.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550172|gb|EEF51659.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 543
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 244/471 (51%), Gaps = 21/471 (4%)
Query: 66 RLNELCLNGSLEQ---ALKYLDSMQELNICVDEDALV--NLVRLCEWK---RGYDEGLYL 117
RL LC S+ AL +S + D +V NLV+ C+ + L
Sbjct: 3 RLGSLCRRHSISIFPCALHSSNSSCAFSYTPDSTEIVYDNLVKFCDGLAVLKQIHSALTT 62
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC----DRDLFSWNVLIGGYAK 173
+S+++K+ HL+ ++ + + KFG L A +F + +R F WN +I YA
Sbjct: 63 NSLITKS-PHLAAQI----IIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIRAYAN 117
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG E L LY M GV + YTFP + + C L +GK H ++ +++DV
Sbjct: 118 AGLCFETLELYMLM-RRAGVSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFDSDVY 176
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V AL+ MY KCG R +FD MP +D + W AMI+ Y + + + L+L M++
Sbjct: 177 VKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHG 236
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ PD +T+ SV SA + D K + VH Y I+ F ++ V N ++ M+ GN E+
Sbjct: 237 LFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNMEKSC 296
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F M+ ++V+SW +M+S Y + +A+ + M G P+ +T +++ACA LG
Sbjct: 297 LIFDMMDERNVISWNSMLSGYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAACAYLG 356
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSI 471
+ LG K H + + + + + N L+DMY+KC + A+E+F+ + ++NV SW +
Sbjct: 357 SRHLGGKFHDFILDSKMKIDMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVL 416
Query: 472 ILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
I G ++ EAL + +M +++PN +T SILSAC+ G + G+ +
Sbjct: 417 ISGYGMHGHGKEALRLYSRMQEESVEPNHITFTSILSACSHAGLIDEGRNL 467
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 190/361 (52%), Gaps = 8/361 (2%)
Query: 238 LITMYVKCGDLVRARLVFDGM----PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+I Y K G L AR +FDG+ R WN MI Y G + L L+++MR
Sbjct: 76 IIIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAG 135
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V + T + A G+ HG +K F DV V L+ MY G +G
Sbjct: 136 VSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFDSDVYVKAALVDMYAKCGQFCDGR 195
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K+F M KD+V WT MI+ YE PD+A+ + M+ G PDE+T+ SV SA L
Sbjct: 196 KIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLW 255
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ +H A+R + I +AN+++ M++KC ++K+ +F + ++NVISW S++
Sbjct: 256 DAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLS 315
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N ++ EAL F KM +PNSVT + +++ACA +G+ G + H L +
Sbjct: 316 GYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKI 375
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILLTGYAERGQGALAEEFFRK 589
D L NAL+DMY +CG +K A FN +ER+VS+WN+L++GY G G A + +
Sbjct: 376 DMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSR 435
Query: 590 M 590
M
Sbjct: 436 M 436
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 158/296 (53%), Gaps = 3/296 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + A + M+ K G +F +M +DL W +I Y + DEAL L ++M
Sbjct: 175 VYVKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKM-Q 233
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+ PD T V G + D K + VH + IR + ++ V N+++ M+ KCG++
Sbjct: 234 QHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNME 293
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
++ L+FD M +R+ ISWN+M+SGY +NG+ + L LF MR+ +P+ +T +++A
Sbjct: 294 KSCLIFDMMDERNVISWNSMLSGYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAACA 353
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVSW 367
+G LG + H +++ D+++ N L+ MY G+ + ++F+ + ++V SW
Sbjct: 354 YLGSRHLGGKFHDFILDSKMKIDMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVSSW 413
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+IS Y +A+ Y M+ E P+ IT S+LSAC+ G +D G L +
Sbjct: 414 NVLISGYGMHGHGKEALRLYSRMQEESVEPNHITFTSILSACSHAGLIDEGRNLKE 469
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 339 LIKMYLSFGNREEGEKVFS----RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
+I Y FG +F R +++ W TMI Y + L + +E Y +M G
Sbjct: 76 IIIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAG 135
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ T + ACA L G H A++ S + + L+DMY+KC
Sbjct: 136 VSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFDSDVYVKAALVDMYAKCGQFCDGR 195
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
++F ++P K+++ WT++I + EALI RKM + L P+ VT+VS+ SA ++
Sbjct: 196 KIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLW 255
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+ +HA+A+R + F+ N++L M+ +CG M+ + F+ +ER+V +WN +L+
Sbjct: 256 DAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLS 315
Query: 573 GYAERGQGALAEEFFRKMIDS 593
GY + GQ + A F KM DS
Sbjct: 316 GYTQNGQASEALFLFDKMRDS 336
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG +AL D M++ + + +V C + G H +
Sbjct: 311 NSMLSGYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILD 370
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEAL 181
+ + + L NA + M+ K GDL A +F + +R++ SWNVLI GY G EAL
Sbjct: 371 SKMKIDMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEAL 430
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
LY RM V+P+ TF +L C + G+ +
Sbjct: 431 RLYSRM-QEESVEPNHITFTSILSACSHAGLIDEGRNL 467
>gi|218191884|gb|EEC74311.1| hypothetical protein OsI_09581 [Oryza sativa Indica Group]
Length = 1112
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 245/469 (52%), Gaps = 23/469 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + KT + + + N+ LS++ GD A +FG+M DRD+ SW +IG +G+
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+AL L++ M G ++PD VLR C + D++ G VH R G + D+ V N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVVVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
+L+ MY KC DL AR VFD + ++ +SWN M+SG G Y + L L + ++ V
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLAL--QIGVVG 327
Query: 297 DFMTLSSVISASELVGDEKLG----REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D TL+ ++ +L ++LG R VHG I+ +++ N L+ Y G E+
Sbjct: 328 DETTLAVLL---QLCKKKRLGGQAARSVHGAAIRRRLL-SMALLNALLDAYGKCGLVEDV 383
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
++F M ++V++W+T+I+ + P A+ + M G P+ IT+ S++ AC
Sbjct: 384 LRLFQGMRERNVITWSTVIAACAHNGRPHAAMACFVAMLETGERPNSITVLSLVEACGSC 443
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ + H +A+R+GL + + N L+ MY KC + + VF +P K+V++W S+I
Sbjct: 444 AEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVKDVLTWNSMI 503
Query: 473 LGLRLNNRSFEALIFFRKMML---NLKPNSVTLVSILSACARIG----ALMCGKEIHAHA 525
L +N R+ +AL +M ++PN VT+++ L ACA G + C + + +
Sbjct: 504 GALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIGCLESMARQS 563
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLT 572
L+ V + ++DM R G + A + +S +AW+ LL+
Sbjct: 564 LQPRVEH----VSCVVDMLARAGDLDGAAEIVRRSSGGGSPAAWSALLS 608
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 9/294 (3%)
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H Y++K S V N L+ +Y + G+ +F M +DV SWT+MI GS
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 380 PDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
D+A+ ++ M A+G++ PD + + VL ACA L ++ G +H +A R GL + + N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVVVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPN 498
+L+DMY+KC + A +VF I KNV+SW +++ GL ++ S+ + + + + +
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGL-VHAGSYPEALHLLALQIGVVGD 328
Query: 499 SVTLVSILSACA--RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
TL +L C R+G + +H A+R + L NALLD Y +CG ++
Sbjct: 329 ETTLAVLLQLCKKKRLGG-QAARSVHGAAIRRRLLSMALL-NALLDAYGKCGLVEDVLRL 386
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F ER+V W+ ++ A G+ A F M+++ + N ++ L C
Sbjct: 387 FQGMRERNVITWSTVIAACAHNGRPHAAMACFVAMLETGERPNSITVLSLVEAC 440
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 184/398 (46%), Gaps = 17/398 (4%)
Query: 71 CL-NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
CL +G +QAL+ M + + D +V ++R C G +H+V ++
Sbjct: 204 CLGSGYADQALRLFREMLADGALQPDGVVVVVVLRACAMLEDVRAGASVHAVATRRGLQG 263
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + N+ + M+ K DL A VF + +++ SWN ++ G AG + EAL L
Sbjct: 264 DLFVDNSLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQI 323
Query: 189 WVGGVKPDVYTFPCVLRTC-----GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
GV D T +L+ C GG + + VH IR + ++NAL+ Y
Sbjct: 324 ---GVVGDETTLAVLLQLCKKKRLGG----QAARSVHGAAIRRRL-LSMALLNALLDAYG 375
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + +F GM +R+ I+W+ +I+ NG + F+ M E P+ +T+ S
Sbjct: 376 KCGLVEDVLRLFQGMRERNVITWSTVIAACAHNGRPHAAMACFVAMLETGERPNSITVLS 435
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + R HG ++ G +++V N L+ MY G +VF M KD
Sbjct: 436 LVEACGSCAEMWASRRAHGVAVRSGLGFELAVGNALVHMYGKCGELGASARVFDTMPVKD 495
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSACACLGNLDLGIKL 421
V++W +MI + A+ MEAEG P+ +T+ + L ACA G ++ GI
Sbjct: 496 VLTWNSMIGALGMNGRARDALALLHRMEAEGDEVRPNGVTMLAALWACAHGGLVEEGIGC 555
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ R L + + ++DM ++ +D A E+ +
Sbjct: 556 LESMARQSLQPRVEHVSCVVDMLARAGDLDGAAEIVRR 593
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 3/191 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++T + +AN+L+ +Y+ A +F ++PD++V SWTS+I +
Sbjct: 150 IHAYLLKTPASIHTPVANSLLSLYATLGDFASAAILFGEMPDRDVASWTSMIGACLGSGY 209
Query: 481 SFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ +AL FR+M+ + L+P+ V +V +L ACA + + G +HA A R G+ D F+ N
Sbjct: 210 ADQALRLFREMLADGALQPDGVVVVVVLRACAMLEDVRAGASVHAVATRRGLQGDLFVDN 269
Query: 539 ALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNW 597
+L+DMY +C ++ A F+ ++V +WN +L+G G A I G+
Sbjct: 270 SLVDMYAKCLDLRSARKVFDLIAVKNVVSWNTMLSGLVHAGSYPEALHLLALQIGVVGDE 329
Query: 598 RKLMGLFRKCQ 608
L L + C+
Sbjct: 330 TTLAVLLQLCK 340
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 234/448 (52%), Gaps = 22/448 (4%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWV----GGVKPDVYTFPCVLRTC---GGVPDLKRG 216
+N LI AG A + + G +PD YT P L+ C GG L+ G
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGG--GLREG 137
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ H + G+ V V NAL+T Y CG AR VFD M +RD +SW A++S +
Sbjct: 138 CQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRG 197
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G +M+ L + + E+ V P+ +TL+SV+ A +G + G+ VHG+ + ++ V
Sbjct: 198 GMFMEALGV---LAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVG 254
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY+ + +VF + ++D+VSWT MIS P +A+E + M+ G
Sbjct: 255 NALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVK 314
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD++ +++VLSACA LG L+ G +H+ R G+ + + +++DMY KC C+D A+ +
Sbjct: 315 PDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSI 374
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F ++P KNV SW ++I G L+ R EAL F +M+ + L PN VT +++L AC G +
Sbjct: 375 FQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLV 434
Query: 516 MCGK---EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNIL 570
G+ E+ + ++ D + ++D+ R G ++ A++ + V W L
Sbjct: 435 QEGRQLFELMTKSYKLSPWEDHY--GCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTL 492
Query: 571 LTGYAERGQGALAEEFFRKM--IDSKGN 596
L+ G+ +++ + ++S GN
Sbjct: 493 LSACQAHGRMDFSQQILMHIHELESSGN 520
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 6/373 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
G EG H+V K V + NA ++ + G G A VF +M +RD+ SW L+
Sbjct: 133 GLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLS 192
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+ + G F EAL + M V P+ T VL CG + + GK VH R E
Sbjct: 193 AFTRGGMFMEALGVLAEM----DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKE 248
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
++ V NAL+ MYVKC L AR VFD + RD +SW MISG + + L +F M
Sbjct: 249 LNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAM 308
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ V PD + LS+V+SA +G + GR VH Y+ + G DV V ++ MY+ G
Sbjct: 309 QISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCL 368
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ +F M K+V SW +I+ + +A++ + M A G P+E+T +VL AC
Sbjct: 369 DTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGAC 428
Query: 410 ACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVIS 467
G + G +L +L ++ +S + ++D+ + I +A +V +P + V +
Sbjct: 429 CHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFT 488
Query: 468 WTSIILGLRLNNR 480
W +++ + + R
Sbjct: 489 WVTLLSACQAHGR 501
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ ++MQ + D+ L ++ C + G ++H + + V +G + +
Sbjct: 300 EALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVV 359
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+VK G L A +F +M +++ SWN LI G+A G EAL + RM G+ P+
Sbjct: 360 DMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMV-ASGLHPNE 418
Query: 198 YTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G+++ + + D ++ + + G + A V
Sbjct: 419 VTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIK 478
Query: 257 GMPKRDRI-SWNAMISGYFENG--EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
MP R + +W ++S +G ++ + +++ I E + ++ LS++ + S+ D
Sbjct: 479 AMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWAD 538
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 229/435 (52%), Gaps = 14/435 (3%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
++F++N +I G+ GF +E YQ+M GV PD +TFPC ++ C V ++K+ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKM-RNEGVMPDKFTFPCAIKACLDVLEIKK---I 158
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H + +FG E DV + +AL+ Y+K G + A++ F+ +P RD + WNAM++GY + G++
Sbjct: 159 HGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQF 218
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
L F M + V P T++ +S ++GD GR +HG+ +KMG+ V+V N L
Sbjct: 219 EMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSL 278
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
I MY E+ ++F M KD+ SW +++S +E D + M G PD
Sbjct: 279 IDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDL 338
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGL------ISYIIIANTLIDMYSKCKCIDKA 453
+T+ +VL AC+ L L G ++H + +GL I +++ N +IDMY+KC + A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
VF ++ +K+V SW +I+G ++ EAL F +M + LKP+ VT V +LSAC+
Sbjct: 399 HLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHA 458
Query: 513 GALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNI 569
G + G+ + VA ++DM R G++ A+ + E + W
Sbjct: 459 GFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRA 518
Query: 570 LLTGYAERGQGALAE 584
LL LAE
Sbjct: 519 LLAACRLHKHAVLAE 533
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 190/353 (53%), Gaps = 13/353 (3%)
Query: 265 SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
++NA+ISG+ NG +G + MR V PD T I A V + K ++HG +
Sbjct: 106 AFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIHGLL 162
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
K G DV + + L+ YL FG E + F + +DVV W M++ Y + +
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
ET++ M E +P T+ LS A +G+L+ G +H AM+ G S + ++N+LIDMY
Sbjct: 223 ETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMY 282
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSII-LGLRLNNRSFEALIFFRKMMLNLKPNSVTLV 503
KCKCI+ ALE+F + +K++ SW SI+ + + + + R + ++P+ VT+
Sbjct: 283 GKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVT 342
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDG------FLPNALLDMYVRCGRMKPAWNQF 557
++L AC+ + ALM G+EIH + + G+ DG L NA++DMY +CG M+ A F
Sbjct: 343 TVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVF 402
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
+ +DV++WNI++ GY G G A E F +M + K + +G+ C
Sbjct: 403 ERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 21/446 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC----EWKRGYDEGLYLHS 119
N+ ++ NG E+ ++ M+ + D+ ++ C E K+ +H
Sbjct: 108 NAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKK-------IHG 160
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
++ K L V +G+A ++ ++KFG + HA F ++ RD+ WN ++ GYA+ G F+
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
L ++RM V P +T L + DL G+ +H ++ GY++ V V N+LI
Sbjct: 221 VLETFRRMN-DESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFM 299
MY KC + A +F+ M ++D SWN+++S + + G++ L L M + PD +
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFS------DDVSVCNPLIKMYLSFGNREEGE 353
T+++V+ A + GRE+HGY+I G DDV + N +I MY G+ +
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF RM +KDV SW MI Y ++A+E + M PDE+T VLSAC+ G
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 459
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
+ G L Q+ + + I +IDM + +D+A E+ +P + N + W ++
Sbjct: 460 FVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP 497
+ RL+ + A + ++ + L+P
Sbjct: 520 LAACRLHKHAVLAEVAAQR-VFELEP 544
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
H+I NV ++ +II G N E F++KM + P+ T + AC + +
Sbjct: 100 HEI---NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K+IH + G+ D F+ +AL++ Y++ G M+ A F RDV WN ++ GYA
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 576 ERGQGALAEEFFRKMID 592
+ GQ + E FR+M D
Sbjct: 214 QIGQFEMVLETFRRMND 230
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 262/551 (47%), Gaps = 81/551 (14%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ LSMF K G L A VF +M +RD SW V++ G +AG F EA+ M G
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT-ADGF 160
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P +T VL +C G++VH V++ G + V V N+++ MY KCGD A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATT 220
Query: 254 VFDGMPKR-----------------------------DR--ISWNAMISGYFENGEYMKG 282
VF+ MP R DR +SWNAMI+GY +NG K
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 280
Query: 283 LMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L LF M+ E + PD T++SV+SA +G+ ++G++VH Y+++ + + V N LI
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 340
Query: 342 MY-----------------------LSF----------GNREEGEKVFSRMESKDVVSWT 368
Y +SF G+ E ++F M ++DVV+WT
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI YE + D+A++ ++ M G P+ T+A+VLS CA L LD G ++H A+R+
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIF 487
L ++N +I MY++ A +F Q+ K I+WTS+I+ L + + EA+
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDM 543
F +M+ ++P+ +T V +LSAC+ G + GK + + +I + ++D+
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYA--CMVDL 578
Query: 544 YVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMI----DSKGN 596
R G A +F E D AW LL+ LAE K++ ++ G
Sbjct: 579 LARAGLFSEA-QEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGA 637
Query: 597 WRKLMGLFRKC 607
+ + ++ C
Sbjct: 638 YSAIANVYSAC 648
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 203/433 (46%), Gaps = 41/433 (9%)
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+ V + M SV NA +S+ G + A +F M DR + SWN +I GY + G
Sbjct: 219 TTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDA 278
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+AL L+ RM + PD +T VL C + +++ GK+VH +++R + V NAL
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338
Query: 239 ITM---------------------------------YVKCGDLVRARLVFDGMPKRDRIS 265
I+ YVK GD+ AR +F M RD ++
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVA 398
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
W AMI GY +NG + + LF M +P+ TL++V+S + G+++H I
Sbjct: 399 WTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 458
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAV 384
+ SV N +I MY G+ ++F ++ K+ ++WT+MI ++AV
Sbjct: 459 RSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAV 518
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLISYIIIANTLIDM 443
++ M G PD IT VLSAC+ G ++ G + + Q+ + + ++D+
Sbjct: 519 GLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDL 578
Query: 444 YSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS--- 499
++ +A E ++P + + I+W S++ R++ + A + K +L++ PN+
Sbjct: 579 LARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK-LLSIDPNNSGA 637
Query: 500 -VTLVSILSACAR 511
+ ++ SAC R
Sbjct: 638 YSAIANVYSACGR 650
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 260/532 (48%), Gaps = 12/532 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L +G+ +A + L +M + + AL + +R R G L S+ K
Sbjct: 62 NALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALK 121
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V +A L ++ K G + A VF M +R+ SWN LI GY ++G AL L
Sbjct: 122 SGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALEL 181
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G V PD TF +L G P ++H ++++G + V+NA IT Y
Sbjct: 182 FLEMEREGLV-PDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYS 239
Query: 244 KCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTL 301
+CG L +R +FDG+ RD ISWNAM+ Y NG + + F+ MM+E V PD +
Sbjct: 240 QCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSF 299
Query: 302 SSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR---EEGEKVFS 357
+S+IS+ SE D+ GR +HG VIK VCN LI MY + E+ K F+
Sbjct: 300 TSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFN 359
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+ KD VSW +M++ Y L A++ ++ M +E DE ++ L + + L L L
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQL 419
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G ++H L + +G S ++++LI MYSK ID A + F + + + W ++I G
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479
Query: 478 NNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEI-HAHALRIGVAFDGF 535
+ ++ I F +M+ P + +T V ++++C+ G + G EI + + GV
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRME 539
Query: 536 LPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
+D+Y R G++ A +S E D W LL G LA +
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASD 591
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 249/474 (52%), Gaps = 16/474 (3%)
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
L A VF ++ RD SWN L+ +A +G EA L + M G+ + + LR
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMH-AQGLASNTFALGSALR 101
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+ G ++ ++ G +V +AL+ +Y KCG + AR VFDGMP+R+ +S
Sbjct: 102 SAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVS 161
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDE-KLGREVHGY 323
WNA+I+GY E+G+ L LF+ M RE LV PD T +S+++A E G L ++HG
Sbjct: 162 WNALIAGYTESGDMASALELFLEMEREGLV-PDEATFASLLTAVE--GPSCFLMHQLHGK 218
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDK 382
++K G + ++V N I Y G+ ++ ++F + + +D++SW M+ Y + + D+
Sbjct: 219 IVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDE 278
Query: 383 AVETY-QMMEAEGSMPDEITIASVLSACACLGNLD-LGIKLHQLAMRTGLISYIIIANTL 440
A++ + +MM+ G PD + S++S+C+ G+ D G +H L +++ L + N L
Sbjct: 279 AMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNAL 338
Query: 441 IDMYSKCK---CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
I MY++ ++ A + F+ + K+ +SW S++ G + S +AL FFR M N++
Sbjct: 339 IAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVR 398
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+ + L + + + L GK+IH + G A + F+ ++L+ MY + G + A
Sbjct: 399 TDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKS 458
Query: 557 FNSNERDVSA-WNILLTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKC 607
F ++ S WN ++ GYA+ GQ + F +M+ K + +GL C
Sbjct: 459 FEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSC 512
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 195/386 (50%), Gaps = 22/386 (5%)
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENG 277
H +++ G+ A N L+T Y + L AR VFD +P+RD +SWNA+++ + +G
Sbjct: 14 HASLLKSGFAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ + L M + + L S + ++ + +G ++ +K G +++V +
Sbjct: 73 AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ +Y G + +VF M ++ VSW +I+ Y S A+E + ME EG +P
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP 192
Query: 398 DEITIASVLSAC---ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
DE T AS+L+A +C L +LH ++ G + + N I YS+C + +
Sbjct: 193 DEATFASLLTAVEGPSCF----LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR 248
Query: 455 EVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACAR 511
+F I D +++ISW +++ N EA+ FF +MM + P+ + SI+S+C+
Sbjct: 249 RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSE 308
Query: 512 IGA-LMCGKEIHAHALRIGVAFDGFLP--NALLDMYVRCGR---MKPAWNQFNS-NERDV 564
G G+ I H L I A +G P NAL+ MY R M+ A+ FNS +D
Sbjct: 309 HGHDDHQGRVI--HGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDT 366
Query: 565 SAWNILLTGYAERGQGALAEEFFRKM 590
+WN +LTGY++ G A A +FFR M
Sbjct: 367 VSWNSMLTGYSQHGLSADALKFFRCM 392
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 220/402 (54%), Gaps = 14/402 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L C + L + VH H+ + G AD+ V +L+ Y++CG AR +FDGMP+R+
Sbjct: 84 LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERN 143
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W A+++GY N + GL +F+ M E+ P TL + ++A D LG++VHG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPD 381
Y IK G S+ N L +Y G+ + + F R+ K+V++WTTMIS C E +
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ + M +G MP+E T+ SV+S C +L+LG ++ + + G + + + N+ +
Sbjct: 264 LGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALIFFRK 490
+Y + D+A+ +F Q+ D ++I+W ++I G L+ +R F+AL FR
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + +KP+ T SILS C+ + AL G++IHA ++ G D + +AL++MY +CG
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F R W +++GY++ GQ A + F +M
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/546 (27%), Positives = 276/546 (50%), Gaps = 30/546 (5%)
Query: 74 GSLEQALKYLDSMQELNICVDEDAL-----VNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
G +E L+ LD + + + + A+ V L+ C +H ++KT +
Sbjct: 52 GGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGA 111
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + + ++ +++ G A +F M +R++ +W L+ GY L ++ M
Sbjct: 112 DMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+G P YT L C D+ GK+VH + I++G E+ + N+L ++Y K G L
Sbjct: 172 EMGRY-PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISA 307
A F +P+++ I+W MIS E+ E ++ GL LFI M V P+ TL+SV+S
Sbjct: 231 DSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSL 290
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D LG++V + K+G ++ V N + +YL G +E ++F +ME +++W
Sbjct: 291 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 350
Query: 368 TTMISCYE---GSVLPD--------KAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
MIS Y S D +A+ ++ ++ PD T +S+LS C+ + L+
Sbjct: 351 NAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALE 410
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H +++G +S +++ + L++MY+KC CI A + F ++P + ++WTS+I G
Sbjct: 411 QGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYS 470
Query: 477 LNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ + EA+ F +M L ++PN +T VS+LSAC+ G L+ E + ++ +
Sbjct: 471 QHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG-LVEEAEHYFDMMKKEYCIEPV 529
Query: 536 LPN--ALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + ++DM+VR GR++ A++ F NE + W+ L+ G G LA
Sbjct: 530 VDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE---AIWSSLVAGCRSHGNMELAFYAAD 586
Query: 589 KMIDSK 594
K+++ K
Sbjct: 587 KLLELK 592
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 196/407 (48%), Gaps = 24/407 (5%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D G +H K + +GN+ S++ K G L A F ++ ++++ +W +I
Sbjct: 196 DLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISAC 255
Query: 172 AKAGFFDE-----ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
A+ DE LSL+ M + GV P+ +T V+ CG DL GK+V +
Sbjct: 256 AE----DEECVELGLSLFIDML-MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 310
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK----- 281
G E ++ V N+ + +Y++ G+ A +F+ M I+WNAMISGY + + K
Sbjct: 311 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 282 ------GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
L +F ++ ++ PD T SS++S + + G ++H IK GF DV V
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+ L+ MY G ++ K F M ++ V+WT+MIS Y P +A++ ++ M G
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKAL 454
P+EIT S+LSAC+ G ++ + + I ++ +IDM+ + ++ A
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 455 EVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV 500
+ + N W+S++ G R ++ + E + +L LKP +
Sbjct: 551 SFIKRTGFEPNEAIWSSLVAGCR-SHGNMELAFYAADKLLELKPKGI 596
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 246/460 (53%), Gaps = 19/460 (4%)
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
H+ VF + +++F WN LI GYAK ++EA L+ +M V PD +T + +
Sbjct: 76 HSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQM-CSSDVLPDDFTLSTLSKVS 134
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
+ L GK +H IR G+ +D V N++++MY KCG+ +R VFD M R+ SWN
Sbjct: 135 SELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWN 194
Query: 268 AMISGYFENG--EYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDE---KLGREVH 321
+I+GY +G + + F+ M+ V PD T+SS++ + GD+ GRE+H
Sbjct: 195 VLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCD--GDKGKWDYGRELH 252
Query: 322 GYVIK----MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
Y++K +G DV + LI MY G +VF RM+ ++V SWT MI+ Y +
Sbjct: 253 CYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVEN 312
Query: 378 VLPDKAVETYQMMEA-EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
D+A+ ++ M+ +G P+ +++ SVL AC+ L G ++H A+R L + + +
Sbjct: 313 GDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSL 372
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
N LIDMYSKC +D A VF K+ ISW+S+I G L+ + EA++ + KM+
Sbjct: 373 CNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAG 432
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRMKPA 553
++P+ +T V ILSAC+R G + G I++ + G+ + ++DM R G++ PA
Sbjct: 433 IRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPA 492
Query: 554 WNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + E S W L++ G + E +R +I
Sbjct: 493 LDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLI 532
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 217/435 (49%), Gaps = 29/435 (6%)
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
YA A FD +L+L Q + + K LK ++ H ++ G
Sbjct: 14 YASAFEFDPSLALLQSLHFSVTHK-----------------SLKLTRQSHSRILSLGLSQ 56
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI Y C +RLVFD + ++ WN++I+GY +N Y + LF M
Sbjct: 57 NSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMC 116
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD TLS++ S +G G+ +HG I++GF D V N ++ MY GN E
Sbjct: 117 SSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFE 176
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM---MEAEGSMPDEITIASVLS 407
E KVF M ++ SW +I+ Y S + ET++ M+ + PD TI+S+L
Sbjct: 177 ESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP 236
Query: 408 AC-ACLGNLDLGIKLHQLAMRT----GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
C G D G +LH ++ GL S + + LIDMYS+ + VF ++
Sbjct: 237 LCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKC 296
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKE 520
+NV SWT++I G N S EAL FR M + ++PN V+LVS+L AC+ L+ G++
Sbjct: 297 RNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQ 356
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTGYAERG 578
IH A+R + + L NAL+DMY +CG + A F + +D +W+ +++GY G
Sbjct: 357 IHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHG 416
Query: 579 QGALAEEFFRKMIDS 593
+G A + KM+ +
Sbjct: 417 KGQEAILLYDKMLQA 431
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 221/454 (48%), Gaps = 13/454 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS +N N +A + + M ++ D+ L L ++ G +H +
Sbjct: 93 NSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIR 152
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG---FFDEA 180
+ N+ +SM+ K G+ + VF +M R+ SWNVLI GYA +G F +E
Sbjct: 153 IGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREET 212
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRGKEVHVHVIR----FGYEADVDVV 235
++M + V+PD YT +L C G G+E+H ++++ G ++DV +
Sbjct: 213 WEFVKQM-QMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLG 271
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-V 294
LI MY + +V R VFD M R+ SW AMI+GY ENG+ + L LF M+ + +
Sbjct: 272 CCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGI 331
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
+P+ ++L SV+ A GR++HG+ ++ +++VS+CN LI MY G+ + +
Sbjct: 332 EPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARR 391
Query: 355 VFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF KD +SW++MIS Y +A+ Y M G PD IT +LSAC+ G
Sbjct: 392 VFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSG 451
Query: 414 NLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
++ G+ ++ + G+ + I ++DM + +D AL+ +P + S +
Sbjct: 452 LVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGAL 511
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSI 505
+ + + E + ++ L+P N VSI
Sbjct: 512 VSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSI 545
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 4/481 (0%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
++ H V + + ++ L N +S +KFG L A +F M +R SW +LIGGY ++
Sbjct: 60 VHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EA LY M GG++PD T +L G + ++H HVI+ GYE ++ V
Sbjct: 119 NQSKEAFRLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMV 177
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L+ Y K L A +F M +D +++N++++GY G + + LF+ + +
Sbjct: 178 CNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI 237
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P T ++++SA+ + D K G++VHG+V+K F +V V N L+ Y +E K
Sbjct: 238 KPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGK 297
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M D +S+ +I+ Y + ++ + ++ ++ + A++LS N
Sbjct: 298 LFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLN 357
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L +G ++H A+ G + N L+DMY+KC +A ++F I K+ + WT++I
Sbjct: 358 LRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISA 417
Query: 475 LRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ E + F M P + T SIL ACA + ++ G+++H+ +R G +
Sbjct: 418 YVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSN 477
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ +ALLD Y +CG M A F ER+ +WN L++ YA+ G F++MI
Sbjct: 478 VYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Query: 593 S 593
S
Sbjct: 538 S 538
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 214/398 (53%), Gaps = 2/398 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ V K ++ + N+ + + K L A +F M ++D ++N L+ GY+ G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EA+ L+ + G+KP +TF +L G+ D K G++VH V++ + +V V N
Sbjct: 222 NEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ Y K + +F MP+ D IS+N +I+ Y NG++ + LF ++ D
Sbjct: 281 ALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++++S + + ++GR++H I +G + + V N L+ MY +E +K+F
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ K V WT MIS Y ++ + + M G D+ T AS+L ACA L ++
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG +LH L +R+G +S + + L+D Y+KC C+ A++ F ++P++N +SW ++I
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYA 520
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N L F++M+ + KP+SV+ +S+LSAC+ G
Sbjct: 521 QNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 195/413 (47%), Gaps = 33/413 (7%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
P L + H+++ G+ + N + +++ GDLV A VFD MP ++ IS N MI
Sbjct: 22 PSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81
Query: 271 S-------------------------------GYFENGEYMKGLMLFIMMREVLVDPDFM 299
S GY ++ + + L+ MR ++PD++
Sbjct: 82 SGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
TL +++S + + + ++H +VIK+G+ ++ VCN L+ Y ++F M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+KD V++ ++++ Y L ++A+E + + G P + T A++LSA L + G
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H ++T + + + N L+D YSK +D+ ++F ++P+ + IS+ +I N
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNG 321
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ E+ FRK+ ++LS L G++IH A+ +G F+ + N
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381
Query: 539 ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +C K A F++ + W +++ Y ++G+ F M
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDM 434
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 3/367 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V KT +V +GNA L + K + +F +M + D S+NV+I YA
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G F E+ L++++ + + + F +L +L+ G+++H I G +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQ-FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY KC A+ +FD + + + W AMIS Y + G++ +G+ +F MR
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V D T +S++ A + LGR++H +I+ GF +V + L+ Y G +
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K F M ++ VSW +IS Y + D + ++Q M G PD ++ SVLSAC+ G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 414 NLDLGI-KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ + + + + +++D+ + D+A ++ ++P + + I W+S+
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618
Query: 472 ILGLRLN 478
+ R++
Sbjct: 619 LNSCRIH 625
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 169/427 (39%), Gaps = 87/427 (20%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ + M+ + D+ +++R C G LHS++ ++ +V G
Sbjct: 422 GKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG 481
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A L + K G + A FG+M +R+ SWN LI YA+ G D L+ +Q+M G
Sbjct: 482 SALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ-SGY 540
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD +F VL C CG + A
Sbjct: 541 KPDSVSFLSVLSACS-----------------------------------HCGFVEEALW 565
Query: 254 VFDGM-------PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
F+ M PKR+ + +M+ NG + + L M E+ +P + SSV++
Sbjct: 566 HFNSMTQIYEVTPKREH--YTSMVDVLCRNGRFDEAEKL---MTEMPFEPSEIMWSSVLN 620
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM---YLSFGNREEGEKVFSRMESKD 363
+ + + +L ++ + M +D+ P I M Y G + KV M +
Sbjct: 621 SCRIHKNHELAKKAADRLFNM---EDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 364 V-----VSW------TTMISCYEGSVLPDKAV-----ETYQMMEAEGSMPDEITIASVLS 407
V SW T + S + S K + + ME +G PD +
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPD--------T 729
Query: 408 ACACLGNLDLGIKLHQLAMRTG--LISYIII----ANTLIDMYSKCKCID--KALEVFHQ 459
CA L ++D IK+ L + I++ ++ + ++ M + C D A++V Q
Sbjct: 730 TCA-LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQ 788
Query: 460 IPDKNVI 466
I ++ +I
Sbjct: 789 IVEREII 795
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 248/467 (53%), Gaps = 4/467 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + N+ +SMF FG + A YVF M + D SWN +I Y + G E+L + MF
Sbjct: 165 NVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMF 224
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
V + + T +L CG V +LK G+ +H V++FG+ ++V N LITMY G
Sbjct: 225 RVHK-EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRC 283
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A LVF GM ++D ISWN+M++ Y ++G + L L M + +++T +S ++A
Sbjct: 284 EDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAAC 343
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
G+ +H VI +G ++V V N L+ +Y G E +KVF M +D V+W
Sbjct: 344 SDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWN 403
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLAMR 427
+I + S PD+A++ +++M EG + ITI++VL AC + L+ G+ +H +
Sbjct: 404 ALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIIL 463
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
TG S + N+LI MY+KC ++ + +F ++ KN +W +++ + EAL F
Sbjct: 464 TGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKF 523
Query: 488 FRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+M + + + L+A A++ L G+++H A+++G + F+ +A +DMY +
Sbjct: 524 LLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGK 583
Query: 547 CGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
CG + R +WNIL + ++ G A+E F +MI+
Sbjct: 584 CGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMIN 630
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 252/490 (51%), Gaps = 8/490 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRL 132
GS +++++ + M++ + A+ +LV CE EG+ +H + K V +
Sbjct: 8 GSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFV 67
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + ++ +G A VF +M +++ SW L+ Y G +++Y+RM G
Sbjct: 68 GTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR-SEG 126
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ + T V+ TC + + G +V HVI++G E +V V N+LI+M+ G + A
Sbjct: 127 MSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEAC 186
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF GM + D ISWN+MI+ Y NG + L F M V + + TLS++++ V
Sbjct: 187 YVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVD 246
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ K GR +H V+K G++ +V N LI MY G E+ E VF M KD++SW +M++
Sbjct: 247 NLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMA 306
Query: 373 CY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
CY +G+ L A++ M + +T S L+AC+ G LH L + GL
Sbjct: 307 CYAQDGNCL--DALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGL 364
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+I+ N L+ +Y+K + +A +VF +P ++ ++W ++I G + EAL F+
Sbjct: 365 HENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKL 424
Query: 491 MMLNLKP-NSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M P N +T+ ++L AC L+ G IHA + G D ++ N+L+ MY +CG
Sbjct: 425 MREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCG 484
Query: 549 RMKPAWNQFN 558
+ + N F+
Sbjct: 485 DLNSSNNIFD 494
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 246/499 (49%), Gaps = 16/499 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC------EWKRGYDEGLYL 117
NS + NG +++L+ M ++ ++ L ++ C +W RG +
Sbjct: 201 NSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRG------I 254
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
HS+V K + +V N ++M+ G A VF M ++D+ SWN ++ YA+ G
Sbjct: 255 HSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNC 314
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
+AL L MF++ + TF L C GK +H VI G +V V NA
Sbjct: 315 LDALKLLATMFYMR-RGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNA 373
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+T+Y K G ++ A+ VF MPKRD ++WNA+I G+ ++ E + L F +MRE V +
Sbjct: 374 LVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPIN 433
Query: 298 FMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++T+S+V+ A D + G +H ++I GF D V N LI MY G+ +F
Sbjct: 434 YITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIF 493
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
R+ SK+ +W M++ ++A++ M G DE + + L+A A L L+
Sbjct: 494 DRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILE 553
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +LH LA++ G S +A+ +DMY KC ID L + + +++ +SW +
Sbjct: 554 EGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFS 613
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDG 534
+ +A F +M+ L +KP+ VT VS+LSAC+ G + G + ++ G+
Sbjct: 614 RHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKI 673
Query: 535 FLPNALLDMYVRCGRMKPA 553
++D+ R GR A
Sbjct: 674 GHCVCIIDLLGRSGRFAEA 692
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 215/426 (50%), Gaps = 4/426 (0%)
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP-DLKRGKEVHVHVIRF 226
+ G+ +AG + E++ + M G VKP ++ C L G +VH +++
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFG-VKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G +DV V +L+ +Y G A VF M ++ +SW A++ Y + GE + ++
Sbjct: 60 GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
MR + + T+SSVIS + +E LG +V G+VIK G +VSV N LI M+ F
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ EE VFS M+ D +SW +MI+ Y + L +++ + M + T++++L
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+ C + NL G +H L ++ G S + +NTLI MYS + A VF + +K++I
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW S++ + +AL M + N VT S L+AC+ GK +HA
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
+ +G+ + + NAL+ +Y + G M A F + +RD WN L+ G+A+ + A
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419
Query: 585 EFFRKM 590
+ F+ M
Sbjct: 420 KAFKLM 425
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 145/346 (41%), Gaps = 37/346 (10%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY-DEGLYLHSVVSKTMSHLSVRLGNA 135
++ALK M+E + ++ + N++ C + G+ +H+ + T + N+
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNS 475
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++M+ K GDL + +F ++ ++ +WN ++ A G +EAL M GV
Sbjct: 476 LITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMR-RAGVNV 534
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D ++F L + L+ G+++H ++ G +++ V +A + MY KCG++ +
Sbjct: 535 DEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII 594
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
R R+SWN + S + +G + K F M + V PD +T S++SA G +
Sbjct: 595 PRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVE 654
Query: 316 LGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G + +IK G + C +I + G E E M
Sbjct: 655 EGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVS------------ 702
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
P + S+L+AC GNL+LG K
Sbjct: 703 ----------------------PTDHVWRSLLAACKTHGNLELGRK 726
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 267/527 (50%), Gaps = 14/527 (2%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D A LV+ G H+ + KT + + L N FL+++ K+G++G+A +
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M +R + S+N+LI GY GF+ +A+ L+ + +K D +++ VL CG + D
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEA-RMACLKLDKFSYAGVLSACGQIKD 125
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
GK +H I G V + N LI MY KC + ARL+F+ + D +SWN++I+G
Sbjct: 126 FALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITG 185
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFS 330
Y G Y + L L + M + + TL S + + L + + G+ +HGY +K G
Sbjct: 186 YARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLD 245
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK-----AVE 385
D+ V L+ MY G + ++F +++VV + MI+ + + DK A++
Sbjct: 246 LDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALK 305
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ M+ +G P + T +S++ C + + G ++H + + S I +TLI++YS
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYS 365
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVS 504
+ L+ F+ P +++SWT++I G N + AL F +++ + KP+ + +
Sbjct: 366 LLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITT 425
Query: 505 ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERD 563
+LSACA + A G+++H +A++ G+ + N+ + MY + G + A F D
Sbjct: 426 MLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPD 485
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
V +W++++ A+ G A F +++ S G N +G+ C
Sbjct: 486 VVSWSVMICSNAQHGHAKDAINLF-ELMKSYGIHPNQITFLGVLTAC 531
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 243/496 (48%), Gaps = 20/496 (4%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D+ + ++ C + + G +H + V L N + M+ K + HA +
Sbjct: 108 LDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLL 167
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + D SWN LI GYA+ G ++E L L +M G ++ + +T L++C +
Sbjct: 168 FESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG-LRLNAFTLGSALKSCYLNLN 226
Query: 213 --LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
+ GK +H + ++ G + D+ V AL+ MY K G L A +F P ++ + +NAMI
Sbjct: 227 NMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMI 286
Query: 271 SGYFENGEYMK-----GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
+G+ + + K L LF M+ + P T SS+I + + G+++H ++
Sbjct: 287 AGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHIC 346
Query: 326 KMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
K D + + LI++Y G+ E+ K F+ D+VSWTTMI+ Y + + A+
Sbjct: 347 KHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALA 406
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYS 445
+ + A G PDE I ++LSACA + G ++H A++TG+ + I+ N+ I MY+
Sbjct: 407 LFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYA 466
Query: 446 KCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVS 504
K +D A F +I + +V+SW+ +I + + +A+ F M + PN +T +
Sbjct: 467 KSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLG 526
Query: 505 ILSACARIGALMCGKEIHA-----HALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-QFN 558
+L+AC+ G + G + + ++I V ++D+ R GR+ A N N
Sbjct: 527 VLTACSHGGLVEEGLRYYESMKKDYDMKINVKH----CTCIVDLLSRAGRLLDAKNFILN 582
Query: 559 SNERDVSA-WNILLTG 573
S D W LL+G
Sbjct: 583 SGFGDHPVMWRTLLSG 598
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 8/367 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC--EWKRGYDEGLYLHSVV 121
NS + G+ E+ LK L M + ++ L + ++ C G LH
Sbjct: 180 NSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYT 239
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD--- 178
K L + +G A L M+ K G LG A +F ++++ +N +I G+ + D
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKEC 299
Query: 179 --EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL L+ +M G+KP +TF +++ C + + GK++H H+ + ++D + +
Sbjct: 300 AYEALKLFSQM-QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGS 358
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI +Y G F+ PK D +SW MI+GY +NG++ L LF + P
Sbjct: 359 TLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKP 418
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +++++SA V E+ G +VHGY +K G V N I MY GN + + F
Sbjct: 419 DEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITF 478
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+++ DVVSW+ MI A+ +++M++ G P++IT VL+AC+ G ++
Sbjct: 479 EEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVE 538
Query: 417 LGIKLHQ 423
G++ ++
Sbjct: 539 EGLRYYE 545
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 244/494 (49%), Gaps = 17/494 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S+ L N L+ + + G A + +M R+ S+N+LI Y++ G +L R
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA- 100
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV D +++ L C L+ G+ VH I G + V V N+L++MY KCG++
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD +RD +SWN+++SGY G + + +F MMR + + L SVI
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 309 ELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
GD + VHG VIK G DV + + +I MY G E +F ++ +VV
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 367 WTTMISCY------EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ TMI+ + G + +A+ Y +++ G P E T +SVL AC G L+ G +
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ I + LID+Y C++ F P ++++WT+++ G N
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LP 537
+AL +F + LKP+ T+ S+++ACA + G++I A + G FD F +
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMG 458
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-- 594
N+ + MY R G + A +F E DV +W+ +++ +A+ G A FF +M+D+K
Sbjct: 459 NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVV 518
Query: 595 GNWRKLMGLFRKCQ 608
N +G+ C
Sbjct: 519 PNEITFLGVLTACS 532
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 212/393 (53%), Gaps = 10/393 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ +SM+ K G++G A VF +RD SWN L+ GY +AG +E + ++ M
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFA-MMR 202
Query: 190 VGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GG+ + + V++ C G D + + VH VI+ G ++DV +V+A+I MY K G
Sbjct: 203 RGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGA 262
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYM------KGLMLFIMMREVLVDPDFMTL 301
LV A +F + + + + +N MI+G+ + + L L+ ++ + P T
Sbjct: 263 LVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTF 322
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSV+ A L G + G+++HG VIK F +D + + LI +Y + G E+G + F
Sbjct: 323 SSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D+V+WT M+S + L +KA+ + G PD TI+SV++ACA L G ++
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
A ++G + ++ N+ + MY++ +D A F ++ +V+SW+++I + +
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+AL FF +M+ + PN +T + +L+AC+ G
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 22/458 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG---YDEGLYLHSV 120
NS ++ G+ E+ ++ M+ + ++ AL ++++ C RG D +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS-GRGDGTMDIAEAVHGC 237
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF--- 177
V K V L +A + M+ K G L A +F + + ++ +N +I G+ +
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297
Query: 178 ---DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EAL+LY + G++P +TF VLR C L+ GK++H VI++ ++ D +
Sbjct: 298 EVASEALTLYSEV-QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFI 356
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ALI +Y G + F PK D ++W AM+SG +N + K L LF +
Sbjct: 357 GSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGL 416
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T+SSV++A + + G ++ + K GF + N + MY G+ + +
Sbjct: 417 KPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATR 476
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F MES DVVSW+ +ISC+ A+ + M +P+EIT VL+AC+ G
Sbjct: 477 RFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGL 536
Query: 415 LDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALE-----VFHQIPDKNVISW 468
+D G++ ++ + GL I ++D+ + + A +FH P + W
Sbjct: 537 VDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADP----VIW 592
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
S++ R+ +R E ++ L+P S IL
Sbjct: 593 RSLLASCRI-HRDLERGQLVANRIMELEPTSSASYVIL 629
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 231/464 (49%), Gaps = 17/464 (3%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH++ + +A ++ + HA VF + D WN L+ G + +
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS-- 193
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA+ + RM G V+PD T VL V D+ G+ VH + G V+
Sbjct: 194 --EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI++Y KCGD+ AR +FD M K D +++NA+ISGY NG + LF + + + P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+ TL ++I G + L + +HG+V+K GF+ + V + ++ + E K F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M K + SW MIS Y + L + AV ++ M P+ ITI+S LSACA LG L
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG LH++ L + + LIDMY+KC I +A +F+ + +KNV+SW ++I G
Sbjct: 432 LGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYG 491
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGV 530
L+ + EAL ++ M+ +L P S T +S+L AC+ G + G ++ +A+ G+
Sbjct: 492 LHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGI 551
Query: 531 AFDGFLPNALLDMYVRCGRMKPAW---NQFNSNERDVSAWNILL 571
++D+ R G++K A+ ++F + W LL
Sbjct: 552 EHC----TCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALL 591
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 193/365 (52%), Gaps = 5/365 (1%)
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D V +AL +Y + AR VFD +P D + WN +++G E ++ M+
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAG-LSGSEAVESFAR--MVC 204
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ V PD TL+SV+ A+ V D +GR VH + K G ++ V LI +Y G+ E
Sbjct: 205 DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+F ME D+V++ +IS Y + + +V + + G P+ T+ +++ +
Sbjct: 265 SARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHS 324
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G+ L LH +++G + ++ + ++ + ++ A + F +P+K + SW +
Sbjct: 325 PFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNA 384
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
+I G N + A+ F +M+ LN++PN +T+ S LSACA++GAL GK +H
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + ++ AL+DMY +CG + A FN+ + ++V +WN ++ GY GQGA A + ++
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504
Query: 589 KMIDS 593
M+D+
Sbjct: 505 DMLDA 509
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 18/371 (4%)
Query: 228 YEADVDVVNALITMYVK----CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
Y D +L+ Y G L+R +F G P+ DR NA++ ++
Sbjct: 47 YPLDPAPATSLLLRYASLRAPTGHLLR---LFRGFPRPDRFLRNALLRSL----PSLRPR 99
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
+LF +L+++ S R +H + G++ D V + L K+Y
Sbjct: 100 LLFPCPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTFVASALAKLY 159
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITI 402
+ KVF + S D V W T+++ GS +AVE++ M +GS+ PD T+
Sbjct: 160 FVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTL 215
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
ASVL A A + ++ +G +H A + GL + + LI +YSKC ++ A +F +
Sbjct: 216 ASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEK 275
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+++++ ++I G +N ++ F ++M L L PNS TLV+++ + G + + +
Sbjct: 276 PDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCL 335
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG 580
H L+ G + + A+ ++ R M+ A F++ E+ + +WN +++GYA+ G
Sbjct: 336 HGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLT 395
Query: 581 ALAEEFFRKMI 591
+A F +M+
Sbjct: 396 EMAVALFEQMV 406
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVVS 122
N+ ++ +NG + ++ + L + + LV L+ + G+D LH V
Sbjct: 282 NALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV-HSPFGHDLLAQCLHGFVL 340
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K+ + + A ++ + D+ A F M ++ + SWN +I GYA+ G + A++
Sbjct: 341 KSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVA 400
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+++M + V+P+ T L C + L GK +H + E +V V+ ALI MY
Sbjct: 401 LFEQMVKL-NVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMY 459
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KCG + AR +F+ M ++ +SWNAMI+GY +G+ + L L+ M + + P T
Sbjct: 460 AKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFL 519
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
SV+ A G L E G+ + +DD ++ NP I+
Sbjct: 520 SVLYACSHGG---LVEE--GWKVFRSMTDDYAI-NPGIE 552
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 260/520 (50%), Gaps = 8/520 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
++LK + MQ I +D +N ++ C + G +H ++ ++ S + N+ +
Sbjct: 142 ESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLM 201
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G +A VF ++ D+D+ SWN + G ++ E + ++ + G+KP+
Sbjct: 202 DMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLM-LTGLKPNC 260
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
TF + R CG DL G + H RFG + V ++LI M+ +CG + A LVFD
Sbjct: 261 VTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDS 320
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
P + + N MISGY N + L LF + + ++ D T SS + A ++KLG
Sbjct: 321 APFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLG 380
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++HG ++K GF+ VC+ L+K Y+ FG ++ + F+ +E D+VSW MIS
Sbjct: 381 RQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHK 440
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+A+ ++ G PDE S+ + CA + +H L ++ G +++ +A
Sbjct: 441 GYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVA 500
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
+ +ID Y+KC I+ A VF Q ++VI + ++++ + EA+ F KM L L
Sbjct: 501 SAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATL 560
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPA 553
+P+ T VS++SAC+ +G + G +I ++ + D N L+D++ R G ++ A
Sbjct: 561 EPSQATFVSVISACSHLGLVEQG-DIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDA 619
Query: 554 WNQFNSNERD--VSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + + W LL G G L E +K++
Sbjct: 620 KHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLL 659
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 9/462 (1%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G L VFG+M ++L SW +++ G + G F+ L +Y M G V P+ +
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLV-PNEF 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
CV + C + + G VH ++ G E + V ++++ MY K GD+ A VF+ M
Sbjct: 60 ALGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECM 119
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
WNAMI GY + + L + +M+ + D T + + +VG+ GR
Sbjct: 120 DNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGR 179
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG +I+ +V N L+ MY G KVF R++ KD++SW T+ + G
Sbjct: 180 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTV---FAGLS 236
Query: 379 LPDKAVET---YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
D A E + + G P+ +T + + C +L G++ H LA R G+
Sbjct: 237 QGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS 296
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ ++LI+M+S+C + A VF P K++ + +I G LN + EAL F + L
Sbjct: 297 VTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLG 356
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
L+ + T S L AC R G+++H ++ G A G++ ++LL YV G + ++
Sbjct: 357 LEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSF 416
Query: 555 NQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
FN ER D+ +W +++ +G + A ++ ++ G
Sbjct: 417 EFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGG 458
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 242/521 (46%), Gaps = 4/521 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E L M + +E AL + + C G + GL +H K + +
Sbjct: 36 NGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGKELGLCVHCFALKVGMEKNPFV 95
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G++ L+M+ K GD+ A VF M + + WN +IGGYA+ + E+L + M + G
Sbjct: 96 GSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQY-KG 154
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D +TF L+ C V +L G+++H +I+ V+N+L+ MY K G + A
Sbjct: 155 ISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYAL 214
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD + +D ISWN + +G + + + F + + P+ +T S +
Sbjct: 215 KVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEAL 274
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D G + H + G SD+ SV + LI M+ G VF K + + MIS
Sbjct: 275 DLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMIS 334
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y + +A+ + + G DE T +S L AC N LG ++H +++G S
Sbjct: 335 GYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFAS 394
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++L+ Y +D + E F+ + +++SW ++I L S EA+ ++
Sbjct: 395 QGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLK 454
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
KP+ SI + CA I A K +H+ +++G F+ +A++D Y +CG ++
Sbjct: 455 EAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIE 514
Query: 552 PAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ S RDV +N ++ YA G A E F KM
Sbjct: 515 NARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKM 555
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L G +A+ L+ ++E DE ++ C Y + +HS+V K
Sbjct: 434 ISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGY 493
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQ 185
V + +A + + K GD+ +A VF + RD+ +N ++ YA G EA+ ++
Sbjct: 494 EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFE 553
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVK 244
+M + ++P TF V+ C + +++G + + +G + D L+ ++ +
Sbjct: 554 KM-KLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSR 612
Query: 245 CGDLVRARLVFDGMP 259
G L A+ + + MP
Sbjct: 613 NGFLEDAKHIIETMP 627
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 249/483 (51%), Gaps = 14/483 (2%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H K S + + N L ++KFG LG+A +F +M RD SWN +I GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
++A L+ M G D Y+F +L+ V G++VH VI+ GYE +V V ++
Sbjct: 83 EDAWCLFTCMK-RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDP 296
L+ MY KC + A F + + + +SWNA+I+G+ + + L +M + V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 297 DFMTLSSVISASELVGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D T + +++ L+ D L ++VH V+K+G ++++CN +I Y G+ + +
Sbjct: 202 DAGTFAPLLT---LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 354 KVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF + SKD++SW +MI+ + L + A E + M+ D T +LSAC+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK--CKCIDKALEVFHQIPDKNVISWTS 470
+ G LH + ++ GL N LI MY + ++ AL +F + K++ISW S
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II G S +A+ FF + + +K + ++L +C+ + L G++IHA A + G
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFF 587
+ F+ ++L+ MY +CG ++ A F S++ AWN ++ GYA+ G G ++ + F
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 588 RKM 590
+M
Sbjct: 499 SQM 501
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 231/453 (50%), Gaps = 5/453 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G LE A M+ VD + L++ + +D G +H +V K +V +G
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + M+ K + A+ F ++ + + SWN LI G+ + A L M V
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF +L K+VH V++ G + ++ + NA+I+ Y CG + A+
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG+ +D ISWN+MI+G+ ++ LFI M+ V+ D T + ++SA
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF--GNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +HG VIK G S N LI MY+ F G E+ +F ++SKD++SW ++
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ + L + AV+ + + + D+ +++L +C+ L L LG ++H LA ++G
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN-VISWTSIILGLRLNNRSFEALIFFR 489
+S + ++LI MYSKC I+ A + F QI K+ ++W ++ILG + +L F
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+M N+K + VT +IL+AC+ G + G E+
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 8/397 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + I+ G +D+ V N ++ Y+K G L A ++FD MPKRD +SWN MISGY G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
LF M+ D D + S ++ V LG +VHG VIK G+ +V V +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ MY E+ + F + + VSW +I+ + A +ME + ++
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D T A +L+ +L ++H ++ GL I I N +I Y+ C + A VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 458 HQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
+ K++ISW S+I G + A F +M + ++ + T +LSAC+
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVR--CGRMKPAWNQFNS-NERDVSAWNILLT 572
+ GK +H ++ G+ NAL+ MY++ G M+ A + F S +D+ +WN ++T
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 573 GYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G+A++G A +FF + S K + L R C
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G E A+K+ ++ I VD+ A L+R C G +H++ +K
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
+ + + ++ + M+ K G + A F ++ + +WN +I GYA+ G +L
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITM 241
L+ +M VK D TF +L C ++ G E +++ + + ++ A + +
Sbjct: 497 LFSQMC-NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDL 555
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+ G + +A+ + + MP ++PD M L
Sbjct: 556 LGRAGLVNKAKELIESMP----------------------------------LNPDPMVL 581
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ + G+ ++ +V +++++ D + + L MY EE V M+
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVS-LSHMYSDLKKWEEKASVKKMMKE 640
Query: 362 KDV 364
+ V
Sbjct: 641 RGV 643
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 244/494 (49%), Gaps = 17/494 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S+ L N L+ + + G A + +M R+ S+N+LI Y++ G +L R
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA- 100
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV D +++ L C L+ G+ VH I G + V V N+L++MY KCG++
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD +RD +SWN+++SGY G + + +F MMR + + L SVI
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 309 ELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
GD + VHG VIK G DV + + +I MY G E +F ++ +VV
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 367 WTTMISCY------EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ TMI+ + G + +A+ Y +++ G P E T +SVL AC G L+ G +
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ I + LID+Y C++ F P ++++WT+++ G N
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LP 537
+AL +F + LKP+ T+ S+++ACA + G++I A + G FD F +
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMG 458
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-- 594
N+ + MY R G + A +F E DV +W+ +++ +A+ G A FF +M+D+K
Sbjct: 459 NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVV 518
Query: 595 GNWRKLMGLFRKCQ 608
N +G+ C
Sbjct: 519 PNEITFLGVLTACS 532
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 239/468 (51%), Gaps = 20/468 (4%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ +SM+ K G++G A VF +RD SWN L+ GY +AG +E + ++ M
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFA-MMR 202
Query: 190 VGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GG+ + + V++ C G D + + VH VI+ G ++DV +V+A+I MY K G
Sbjct: 203 RGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGA 262
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYM------KGLMLFIMMREVLVDPDFMTL 301
LV A +F + + + + +N MI+G+ + + L L+ ++ + P T
Sbjct: 263 LVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTF 322
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSV+ A L G + G+++HG VIK F +D + + LI +Y + G E+G + F
Sbjct: 323 SSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D+V+WT M+S + L +KA+ + G PD TI+SV++ACA L G ++
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
A ++G + ++ N+ + MY++ +D A F ++ +V+SW+++I + +
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNA 539
+AL FF +M+ + PN +T + +L+AC+ G + G + + G++
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTC 562
Query: 540 LLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYA-----ERGQ 579
++D+ R GR+ A F SN D W LL ERGQ
Sbjct: 563 VVDLLGRAGRLADA-EAFISNSIFHADPVIWRSLLASCRIHRDLERGQ 609
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 214/454 (47%), Gaps = 14/454 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG---YDEGLYLHSV 120
NS ++ G+ E+ ++ M+ + ++ AL ++++ C RG D +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS-GRGDGTMDIAEAVHGC 237
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF--- 177
V K V L +A + M+ K G L A +F + + ++ +N +I G+ +
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297
Query: 178 ---DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EAL+LY + G++P +TF VLR C L+ GK++H VI++ ++ D +
Sbjct: 298 EVASEALTLYSEV-QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFI 356
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ALI +Y G + F PK D ++W AM+SG +N + K L LF +
Sbjct: 357 GSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGL 416
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T+SSV++A + + G ++ + K GF + N + MY G+ + +
Sbjct: 417 KPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATR 476
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F MES DVVSW+ +ISC+ A+ + M +P+EIT VL+AC+ G
Sbjct: 477 RFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGL 536
Query: 415 LDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSII 472
+D G++ ++ + GL I ++D+ + + D + + I + + W S++
Sbjct: 537 VDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLL 596
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSIL 506
R+ +R E ++ L+P S IL
Sbjct: 597 ASCRI-HRDLERGQLVANRIMELEPTSSASYVIL 629
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 261/558 (46%), Gaps = 43/558 (7%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D +V +R C + +G HS + KT +V + +SM+ F L A+ +
Sbjct: 1 MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M +++ +W ++ Y G EA+ LY RM P+ + + VL+ CG V +
Sbjct: 61 FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD---------------- 256
++ G+ +H R + D+ ++NAL+ MYVKCG L AR VFD
Sbjct: 121 IELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMIS 180
Query: 257 ----------------GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MP R+ +SWN +I+G ENG + L M + D T
Sbjct: 181 GYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGS-SRALQFVCKMHREGIKLDKFT 239
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+ G G+++H YV+K G + L+ MY + ++ ++F +
Sbjct: 240 FPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYS 299
Query: 361 S------KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+V W +M+S Y AV + G+ D T++S L C L N
Sbjct: 300 GGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLN 359
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ LGI++H L + +G ++ + L+D+Y+K + A ++FH++P K++++W+ +++G
Sbjct: 360 VRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMG 419
Query: 475 LRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ AL FR M+ ++ + + ++L C+ + ++ GK++HA ++ G +
Sbjct: 420 CAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETE 479
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
AL+DMY +CG ++ F +RDV W ++ G A+ G+ A E FR+M+
Sbjct: 480 QVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQ 539
Query: 593 S--KGNWRKLMGLFRKCQ 608
S K N +G+ C+
Sbjct: 540 SGLKPNEVTYLGVLTACR 557
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 38/487 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLV-RLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG +A+K M + V + ++V + C + G +H S+ +
Sbjct: 82 NGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSRENLDYDIV 141
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRM--- 187
L NA L M+VK G L A VF ++ R + SWN +I GY K G +EA++L+ +M
Sbjct: 142 LLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDR 201
Query: 188 --------------------------FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
G+K D +TFPC L+TC L GK++H
Sbjct: 202 NVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHC 261
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD------GMPKRDRISWNAMISGYFE 275
+V++ G E+ V+AL+ MY C L A +FD G + WN+M+SGY
Sbjct: 262 YVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVV 321
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ + + + + D TLSS + + + +LG +VH ++ G D V
Sbjct: 322 HEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVV 381
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+ L+ +Y GN ++ K+F R+ KD+V+W+ ++ L A+ ++ M G
Sbjct: 382 GSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGV 441
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
D+ +++VL C+ L ++ G ++H ++ G + + LIDMYSKC ++ L
Sbjct: 442 EVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLV 501
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA 514
+F + D++V+ WT II+G N R+ EAL FR+M+ + LKPN VT + +L+AC G
Sbjct: 502 LFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGL 561
Query: 515 LMCGKEI 521
++ + I
Sbjct: 562 VVEAQTI 568
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 147/310 (47%), Gaps = 3/310 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ ++ A+ + + VD L + +++C G+ +H+++
Sbjct: 313 NSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVT 372
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ L +G+ + ++ K G++ A+ +F ++ +D+ +W+ L+ G AK ALSL
Sbjct: 373 SGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSL 432
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++ M GV+ D Y VL+ C + + GK+VH I+ GYE + + ALI MY
Sbjct: 433 FRDMVTF-GVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYS 491
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG++ ++F + RD + W +I G +NG + L +F M + + P+ +T
Sbjct: 492 KCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLG 551
Query: 304 VISASELVGDEKLGREVHGYV-IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V++A G + + G + + ++ + G +E EK+ + M K
Sbjct: 552 VLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEMPFK 611
Query: 363 -DVVSWTTMI 371
D W++M+
Sbjct: 612 PDKTIWSSML 621
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 232/481 (48%), Gaps = 37/481 (7%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LS + +F M +RD S+N LI G++ G ++ LY+ + V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P T ++ + D G VH V+R G+ A V + L+ MY K G + AR
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 254 VFDGMPK-------------------------------RDRISWNAMISGYFENGEYMKG 282
VF M RD I+W M++G +NG ++
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L +F MR V D T S+++A + + G+++H Y+ + + D+V V + L+ M
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + E VF RM ++++SWT MI Y + ++AV + M+ +G PD+ T+
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SV+S+CA L +L+ G + H LA+ +GL+ YI ++N L+ +Y KC I+ A +F ++
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+ +SWT+++ G ++ E + F KM++N LKP+ VT + +LSAC+R G + G +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 522 HAHALRIG--VAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAER 577
+ V D ++D+Y R GR K A + D W LL+ R
Sbjct: 503 FDSMQKDHDIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLR 561
Query: 578 G 578
G
Sbjct: 562 G 562
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 222/450 (49%), Gaps = 66/450 (14%)
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVD-VVNALITMYVKCGDLVRARLVFD---------- 256
GG ++ VH +++ +A ++N L+T Y K G L RAR VFD
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 257 ---------------------GMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
MP+RD +S+NA+I+G+ G + + L+ ++RE V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P +TLS++I + + D LG VH V+++GF V +PL+ MY G + +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 355 VFSRMESK-------------------------------DVVSWTTMISCYEGSVLPDKA 383
VF ME+K D ++WTTM++ + L +A
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ ++ M AEG D+ T S+L+AC L + G ++H RT + + + L+DM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC+ I A VF ++ +N+ISWT++I+G N S EA+ F +M ++ +KP+ TL
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
S++S+CA + +L G + H AL G+ + NAL+ +Y +CG ++ A F+
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D +W L+TGYA+ G+ + F KM+
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKML 472
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 176/359 (49%), Gaps = 3/359 (0%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V + M +V + N ++ ++ + A +F M DRD +W ++ G + G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L +++RM GV D YTF +L CG + + GK++H ++ R YE +V V +AL+
Sbjct: 263 LDVFRRM-RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC + A VF M R+ ISW AMI GY +N + + F M+ + PD T
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L SVIS+ + + G + H + G ++V N L+ +Y G+ E+ ++F M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D VSWT +++ Y + ++ ++ M G PD +T VLSAC+ G ++ G
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCD 501
Query: 421 LHQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ I I T +ID+YS+ +A E Q+P + W +++ RL
Sbjct: 502 YFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 7/307 (2%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG +AL M+ + +D+ +++ C +EG +H+ +++T +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDN 312
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G+A + M+ K + A VF +M R++ SW +I GY + +EA+ + M
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-Q 371
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G+KPD +T V+ +C + L+ G + H + G + V NAL+T+Y KCG +
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +FD M D++SW A+++GY + G+ + + LF M + PD +T V+SA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACS 491
Query: 310 LVGDEKLGREVHGYVIK---MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVV 365
G + G + + K + DD C +I +Y G +E E+ +M S D
Sbjct: 492 RAGLVEKGCDYFDSMQKDHDIVPIDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHSPDAF 549
Query: 366 SWTTMIS 372
W T++S
Sbjct: 550 GWATLLS 556
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 257/577 (44%), Gaps = 123/577 (21%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L ++ +F ++ + + F WN ++ Y ++ ++AL LY+ M V PD YT+P
Sbjct: 88 FIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMV-KNNVGPDNYTYPL 146
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---------------- 246
V++ C GKE+H HV++ G+++DV V N LI MY CG
Sbjct: 147 VVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLD 206
Query: 247 ---------------DLVRARLVFDGMPKR------------------------------ 261
D+ A+L+FD MP+R
Sbjct: 207 SVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDE 266
Query: 262 -DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
D +SW+A+ISGY +NG Y + L++FI M + D + + SV+SA + K G+ +
Sbjct: 267 KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMI 326
Query: 321 HGYVIKMGFSDDVSVCNPLIKMY-------------------------------LSFGNR 349
HG VI+MG V++ N LI MY + G+
Sbjct: 327 HGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSV 386
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E+ +F M KD+VSW+ +IS Y + + + M+ PDE + SV+SAC
Sbjct: 387 EKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISAC 446
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L LD G +H + GL +I+ TL+DMY KC C++ ALEVF+ + +K V SW
Sbjct: 447 THLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWN 506
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK-----EIHA 523
++I+GL +N +L F +M N + PN +T + +L AC +G + G+ I
Sbjct: 507 ALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEK 566
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER--DVSAWNILLTGYAERGQGA 581
H + V G ++D+ R G + A S DV+ W LL + G
Sbjct: 567 HGIEPNVKHYG----CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTE 622
Query: 582 LAEEFFRKMID-----------------SKGNWRKLM 601
+ E RK+I+ SKG+W ++
Sbjct: 623 MGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVL 659
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 195/382 (51%), Gaps = 36/382 (9%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
M ++ N+ + + K G + AW +F +M ++D+ SW+ LI GY + G ++EAL ++
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY-- 242
M G++ D VL C + +K GK +H VIR G E+ V++ NALI MY
Sbjct: 293 IEMN-ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG 351
Query: 243 -----------------------------VKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+KCG + +AR +FD MP++D +SW+A+ISGY
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
++ + + L LF M+ + PD L SVISA + G+ VH Y+ K G +V
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNV 471
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
+ L+ MY+ G E +VF+ ME K V SW +I + L +++++ + M+
Sbjct: 472 ILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNN 531
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAM--RTGLISYIIIANTLIDMYSKCKCID 451
G +P+EIT VL AC +G +D G + H +M + G+ + ++D+ + ++
Sbjct: 532 GVIPNEITFMGVLGACRHMGLVDEG-RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 590
Query: 452 KALEVFHQIP-DKNVISWTSII 472
+A ++ +P +V +W +++
Sbjct: 591 EAEKLIESMPMAPDVATWGALL 612
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 34/332 (10%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + +DE +V+++ C G +H +V + V L
Sbjct: 282 NGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNL 341
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN--------------------------- 165
NA + M+ G++ A +F + D SWN
Sbjct: 342 QNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDI 401
Query: 166 ----VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
+I GYA+ F E L+L+ M +G ++PD V+ C + L +GK VH
Sbjct: 402 VSWSAVISGYAQHDCFSETLALFHEM-QLGQIRPDETILVSVISACTHLAALDQGKWVHA 460
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
++ + G + +V + L+ MY+KCG + A VF+GM ++ SWNA+I G NG +
Sbjct: 461 YIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 520
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR-EVHGYVIKMGFSDDVSVCNPLI 340
L +F M+ V P+ +T V+ A +G GR + K G +V ++
Sbjct: 521 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 580
Query: 341 KMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
+ G E EK+ M + DV +W ++
Sbjct: 581 DLLGRAGLLNEAEKLIESMPMAPDVATWGALL 612
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Query: 428 TGLISYIIIANTLIDMYSKCKCI--DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
TG IS A+ L+ + I D +L++F +I + N W +++ +N + +AL
Sbjct: 67 TGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKAL 126
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+ ++ M+ N + P++ T ++ ACA GKEIH H L++G D ++ N L++MY
Sbjct: 127 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 186
Query: 545 VRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG M+ A F+ S D +WN +L GY ++G A+ F +M
Sbjct: 187 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM 233
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+ L MQ I DE LV+++ C D+G ++H+ + K ++V LG L
Sbjct: 419 ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLL 478
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M++K G + +A VF M ++ + SWN LI G A G + +L ++ M GV P+
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMK-NNGVIPNE 537
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C + + G+ +I + G E +V ++ + + G L A + +
Sbjct: 538 ITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 597
Query: 257 GMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD-FMTLSSVISASELVGDE 314
MP D +W A++ ++G+ G + + E+ D D F L S I AS+ GD
Sbjct: 598 SMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASK--GDW 655
Query: 315 KLGREVHGYVIKMG 328
+ EV G + + G
Sbjct: 656 EDVLEVRGMMKQQG 669
>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
Length = 760
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 229/472 (48%), Gaps = 13/472 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N L+ +V+ D A +F M RD+ +WN LI GYA G AL ++ G
Sbjct: 12 LSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSALGAFRDARRDG 71
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V D +T+ VL CGG D + G+ H + G V N++I MY KC +
Sbjct: 72 AVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDEV 131
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA-SEL 310
RL FD +RD +SWN ++S Y G + + M V+ D L ++ A SEL
Sbjct: 132 RLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFALGGILKACSEL 191
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
E + R +HG VIK+G DV V + ++ MY G EE KVF + S++VV + TM
Sbjct: 192 EDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYNTM 251
Query: 371 ISCYE---GSVLPD---KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
I+ + P+ +AV Y M P + T SVL C + ++H
Sbjct: 252 IAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAH 311
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
+ G I N LI++YSK + +D +L FH+ P + + +WTS+I N S +A
Sbjct: 312 VILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKA 371
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL--PNALL 541
L F+ + ++P+ T+ S+++ACA + + ++IH +A++ G FD F N+ +
Sbjct: 372 LNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSG--FDRFTLCGNSQI 429
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+MY G +K A F D +W+ ++ YA G A F+KM D
Sbjct: 430 EMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRD 481
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 10/378 (2%)
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+IR GY + + N L+ YV+C D ARL+FDGMP+RD ++WN +I+GY G
Sbjct: 1 MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60
Query: 283 LMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L F R+ V D T ++V++A GD + GR HG + G + V N +I
Sbjct: 61 LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY +E F R E +D VSW ++S Y P+ A M G D
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180
Query: 402 IASVLSACACLGNL-DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+ +L AC+ L + D+ LH ++ GL + + +T++DMY+K +++A++VF I
Sbjct: 181 LGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSI 240
Query: 461 PDKNVISWTSIILGL-RLNNRS-----FEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
P +NV+ + ++I G RL N EA+ + M ++P+ T S+L C
Sbjct: 241 PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLT 572
A+ C ++IHAH + G D F+ NAL+++Y + + + F+ + ++++ W ++T
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMIT 360
Query: 573 GYAERGQGALAEEFFRKM 590
+ A F+ +
Sbjct: 361 AFVRNEHSDKALNLFKGL 378
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 251/526 (47%), Gaps = 25/526 (4%)
Query: 64 NSRLNELCLNGSLEQAL-KYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
N+ + GS AL + D+ ++ + VD ++ C + G H +
Sbjct: 45 NTLIAGYATQGSARSALGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAV 104
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ + + N+ + M+ K + F + +RD SWN+L+ Y + G+ + A +
Sbjct: 105 VSGLARTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAAN 164
Query: 183 LYQRMFWV--GGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALI 239
+ + W+ GV+ D + +L+ C + D + + +H VI+ G + DV V + ++
Sbjct: 165 V---LVWMHRSGVELDAFALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMV 221
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE------YMKGLMLFIMMREVL 293
MY K G L A VF +P ++ + +N MI+G+ G M+ + ++ M
Sbjct: 222 DMYAKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRR 281
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P T SV+ L + R++H +VI GF DD + N LI +Y ++
Sbjct: 282 IRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSL 341
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ F R +++ +WT+MI+ + + DKA+ ++ + G PD+ T++SV++ACA L
Sbjct: 342 RCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLS 401
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++H A+++G + + N+ I+MY + A + F +IP + SW+ +IL
Sbjct: 402 MPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMIL 461
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
++ EAL+ F+KM ++ N +++L AC+ G + G H ++ V+
Sbjct: 462 SYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDEGFR-HYESM---VSD 517
Query: 533 DGFLPNA-----LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
F+P+ ++D+ G++ A + NS+ E D W+ LL
Sbjct: 518 YSFVPDVKHIACMVDLLGHVGKVADAEDFINSSGLENDSVLWHTLL 563
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GNA ++++ K + + F + +++F+W +I + + D+AL+L++ + + G
Sbjct: 323 IGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTG 382
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+PD +T V+ C + +++H + ++ G++ N+ I MY GDL A
Sbjct: 383 -VEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAA 441
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASEL 310
+ F+ +P D SW+ MI Y +G + L+LF MR+ ++ +F L+ +++ S
Sbjct: 442 KKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQ 501
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK-VFSRMESKDVVSWTT 369
++ R V F DV ++ + G + E + S D V W T
Sbjct: 502 GLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDFINSSGLENDSVLWHT 561
Query: 370 MISCYEGSVLPDKAVET 386
++ D+ ++T
Sbjct: 562 LLRACRIHGDKDRGIKT 578
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 242/453 (53%), Gaps = 27/453 (5%)
Query: 152 VFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F + D+ D+FSWN +I A++G EAL + M + + P +FPC ++ C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSL 89
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
D+ GK+ H FGY++D+ V +ALI MY CG L AR VFD +PKRD +SW +MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMI 149
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDP---------DFMTLSSVISASELVGDEKLGREVH 321
GY NG + + LF +++LVD D M L SVISA V + L +H
Sbjct: 150 RGYDLNGNALDAVSLF---KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEG-----EKVFSRMESKDVVSWTTMISCYEG 376
+VIK GF VSV N L+ Y G EG K+F ++ KD VS+ +++S Y
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGG---EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 377 SVLPDKAVETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
S + ++A E ++ + + + IT+++VL A + G L +G +H +R GL +I
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ ++IDMY KC ++ A + F ++ +KNV SWT++I G ++ + +AL F M+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 495 LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++PN +T VS+L+AC+ G + G + +A R GV ++D+ R G ++ A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 554 WN--QFNSNERDVSAWNILLTGYAERGQGALAE 584
++ Q + D W+ LL LAE
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAE 476
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 187/364 (51%), Gaps = 13/364 (3%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ K D SWN++I+ +G+ + L+ F MR++ + P + I A + D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ H G+ D+ V + LI MY + G E+ KVF + +D+VSWT+MI Y+ +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155
Query: 378 VLPDKAVETYQMM------EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
AV ++ + + + D + + SV+SAC+ + L +H ++ G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 432 SYIIIANTLIDMYSKCK--CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + NTL+D Y+K + A ++F QI DK+ +S+ SI+ + S EA FR
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+++ N + N++TL ++L A + GAL GK IH +R+G+ D + +++DMY +C
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLF 604
GR++ A F+ ++V +W ++ GY G A A E F MIDS + N+ + +
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 605 RKCQ 608
C
Sbjct: 396 AACS 399
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 206/425 (48%), Gaps = 10/425 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +L +G +AL SM++L++ + ++ C G H
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A + M+ G L A VF ++ RD+ SW +I GY G +A+SL
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSL 164
Query: 184 YQRMFWVGGVKPDVYTFP-----CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
++ + D V+ C VP + +H VI+ G++ V V N L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 239 ITMYVKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVD 295
+ Y K G+ + AR +FD + +DR+S+N+++S Y ++G + +F +++ +V
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
+ +TLS+V+ A G ++G+ +H VI+MG DDV V +I MY G E K
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F RM++K+V SWT MI+ Y KA+E + M G P+ IT SVL+AC+ G
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 416 DLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIIL 473
G + + + R G+ + ++D+ + + KA ++ ++ K + I W+S++
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 474 GLRLN 478
R++
Sbjct: 465 ACRIH 469
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 136/257 (52%), Gaps = 11/257 (4%)
Query: 349 REEGEKVFSR-MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
R+ +F+R ++ DV SW ++I+ S +A+ + M P + +
Sbjct: 25 RQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIK 84
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ L ++ G + HQ A G S I +++ LI MYS C ++ A +VF +IP ++++S
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVS 144
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPN-------SVTLVSILSACARIGALMCGKE 520
WTS+I G LN + +A+ F+ ++++ + S+ LVS++SAC+R+ A +
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGR--MKPAWNQFNS-NERDVSAWNILLTGYAER 577
IH+ ++ G + N LLD Y + G + A F+ ++D ++N +++ YA+
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 578 GQGALAEEFFRKMIDSK 594
G A E FR+++ +K
Sbjct: 265 GMSNEAFEVFRRLVKNK 281
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 255/502 (50%), Gaps = 12/502 (2%)
Query: 99 VNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
V LV+ + G +HS + KT + L N L+M+ K GD A +F KM
Sbjct: 63 VKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK 122
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++ ++N LI GY + D+ + L+ + +G +K D YT L C +L GK
Sbjct: 123 SNIVTYNSLISGYVQMSNLDKVMILFDKARRLG-LKLDKYTCAGALTACSQSGNLSAGKM 181
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H ++ +G + V + N+LI MY KCG + AR++FD K D +SWN++I+GY +NG+
Sbjct: 182 IHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGK 241
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISA--SELVGDEKLGREVHGYVIKMGFSDDVSVC 336
Y + L + M + + + TL S + A S G + G +H + IK+G DV V
Sbjct: 242 YEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVG 301
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDK----AVETYQMME 391
L+ MY G+ ++ ++F +M K+VV + M++ + + DK A+ + M+
Sbjct: 302 TALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMK 361
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+ G P T +S+L AC + + ++H L + GL+S I + LID+YS +
Sbjct: 362 SCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMM 421
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI--FFRKMMLNLKPNSVTLVSILSAC 509
AL F+ I + ++ T++I G L N FE+ + F+ + KP+ +I+S+C
Sbjct: 422 DALLCFNSIHNLTIVPMTAMIXGY-LQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSC 480
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWN 568
A +G L G++I HA ++G++ N+ + MY + G + A F E D+ +W+
Sbjct: 481 ANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWS 540
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
++ A+ G A FF M
Sbjct: 541 TMICSNAQHGHAMEALRFFELM 562
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 224/474 (47%), Gaps = 11/474 (2%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
++ + + S+I T N S ++ +L++ + D + L + +D+ + C
Sbjct: 115 KLFDKMSKSNIVTYN--SLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQ 172
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
G +H ++ V L N+ + M+ K G + +A +F D SWN L
Sbjct: 173 SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 232
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR--GKEVHVHVIR 225
I GY + G ++E L++ Q+M G+ + YT L+ C + + G +H H I+
Sbjct: 233 IAGYVQNGKYEELLTILQKMHQ-NGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIK 291
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF-----ENGEYM 280
G DV V AL+ MY K G L A +FD M ++ + +NAM++G E+
Sbjct: 292 LGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY 351
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K L LF M+ + P T SS++ A +V D K ++VH + K G D + + LI
Sbjct: 352 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILI 411
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
+Y G+ + F+ + + +V T MI Y + + A+ + + PDE
Sbjct: 412 DLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEF 471
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
++++S+CA +G L G ++ A + G+ + I N+ I MY+K + A F Q+
Sbjct: 472 IXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM 531
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+ +++SW+++I + + EAL FF M ++PN + +L AC+ G
Sbjct: 532 ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRG 585
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 13/390 (3%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L GK VH H+I+ + + + N L+ MY KCGD A +FD M K + +++N++ISG
Sbjct: 75 LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y + K ++LF R + + D T + ++A G+ G+ +HG ++ G
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQ 194
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V + N LI MY G + +F + D VSW ++I+ Y + ++ + Q M
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 254
Query: 393 EGSMPDEITIASVLSACACLGNLD----LGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
G + T+ S L AC+ N + G LH A++ GL +++ L+DMY+K
Sbjct: 255 NGLAFNTYTLGSALKACS--SNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTG 312
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNR-----SFEAL-IFFRKMMLNLKPNSVTL 502
+D A+++F Q+ DKNV+ + +++ GL +++AL +FF +KP+ T
Sbjct: 313 SLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTY 372
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
S+L AC + K++HA + G+ D ++ + L+D+Y G M A FNS +
Sbjct: 373 SSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHN 432
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++ GY + G+ A F +++
Sbjct: 433 LTIVPMTAMIXGYLQNGEFESALSLFYELL 462
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 8/364 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE--GLYLHSVV 121
NS + NG E+ L L M + + + L + ++ C + G LH
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 289
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE-- 179
K HL V +G A L M+ K G L A +F +M D+++ +N ++ G + ++
Sbjct: 290 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 349
Query: 180 ---ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
AL+L+ M G +KP ++T+ +L+ C V D K K+VH + + G +D + +
Sbjct: 350 AYKALNLFFEMKSCG-IKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGS 408
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI +Y G ++ A L F+ + + AMI GY +NGE+ L LF + P
Sbjct: 409 ILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKP 468
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D S+++S+ +G + G ++ G+ K+G S N I MY G+ F
Sbjct: 469 DEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 528
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ME+ D+VSW+TMI +A+ +++M++ G P+ VL AC+ G ++
Sbjct: 529 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 588
Query: 417 LGIK 420
G++
Sbjct: 589 EGLR 592
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 244/481 (50%), Gaps = 4/481 (0%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
++ H V + + ++ L N +S +KFG L A +F M +R SW +LIGGY ++
Sbjct: 60 VHAHQVFDQMPAKNTISL-NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EA LY M GG++PD T +L G + ++H HVI+ GYE ++ V
Sbjct: 119 NQSKEAFRLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMV 177
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N+L+ Y K L A +F M +D +++N++++GY G + + LF+ + +
Sbjct: 178 CNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI 237
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P T ++++SA+ + D K G++VHG+V+K F +V V N L+ Y +E K
Sbjct: 238 KPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGK 297
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M D +S+ +I+ Y + ++ + ++ ++ + A++LS N
Sbjct: 298 LFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLN 357
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L +G ++H A+ G + N L+DMY+KC +A ++F I K+ + WT++I
Sbjct: 358 LRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISA 417
Query: 475 LRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ E + F M P + T SIL ACA + ++ G+++H+ +R G +
Sbjct: 418 YVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSN 477
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ +ALLD Y +CG M A F ER+ +WN L++ YA+ G F++MI
Sbjct: 478 VYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Query: 593 S 593
S
Sbjct: 538 S 538
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 214/398 (53%), Gaps = 2/398 (0%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ V K ++ + N+ + + K L A +F M ++D ++N L+ GY+ G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EA+ L+ + G+KP +TF +L G+ D K G++VH V++ + +V V N
Sbjct: 222 NEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ Y K + +F MP+ D IS+N +I+ Y NG++ + LF ++ D
Sbjct: 281 ALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
++++S + + ++GR++H I +G + + V N L+ MY +E +K+F
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ K V WT MIS Y ++ + + M G D+ T AS+L ACA L ++
Sbjct: 401 DNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG +LH L +R+G +S + + L+D Y+KC C+ A++ F ++P++N +SW ++I
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYA 520
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N L F++M+ + KP+SV+ +S+LSAC+ G
Sbjct: 521 QNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 196/413 (47%), Gaps = 33/413 (7%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
P L + H+++ G+ + N + +++ GDLV A VFD MP ++ IS N MI
Sbjct: 22 PSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81
Query: 271 S-------------------------------GYFENGEYMKGLMLFIMMREVLVDPDFM 299
S GY ++ + + L+ MR ++PD++
Sbjct: 82 SGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141
Query: 300 TLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
TL +++S + + + ++H +VIK+G+ ++ VCN L+ Y ++F M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+KD V++ ++++ Y L ++A+E + + G P + T A++LSA L + G
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H ++T + + + N L+D YSK +D+ ++F+++P+ + IS+ +I N
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNG 321
Query: 480 RSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
+ E+ FRK+ ++LS L G++IH A+ +G F+ + N
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381
Query: 539 ALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +C K A F++ + W +++ Y ++G+ F M
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDM 434
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 3/367 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V KT +V +GNA L + K + +F +M + D S+NV+I YA
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G F E+ L++++ + + + F +L +L+ G+++H I G +
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQ-FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY KC A+ +FD + + + W AMIS Y + G++ +G+ +F MR
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V D T +S++ A + LGR++H +I+ GF +V + L+ Y G +
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
K F M ++ VSW +IS Y + D + ++Q M G PD ++ SVLSAC+ G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 414 NLDLGI-KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ + + + + +++D+ + D+A ++ ++P + + I W+S+
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618
Query: 472 ILGLRLN 478
+ R++
Sbjct: 619 LNSCRIH 625
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 169/427 (39%), Gaps = 87/427 (20%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+ + M+ + D+ +++R C G LHS++ ++ +V G
Sbjct: 422 GKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG 481
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A L + K G + A FG+M +R+ SWN LI YA+ G D L+ +Q+M G
Sbjct: 482 SALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ-SGY 540
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD +F VL C CG + A
Sbjct: 541 KPDSVSFLSVLSACS-----------------------------------HCGFVEEALW 565
Query: 254 VFDGM-------PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
F+ M PKR+ + +M+ NG + + L M E+ +P + SSV++
Sbjct: 566 HFNSMTQIYEVTPKREH--YTSMVDVLCRNGRFDEAEKL---MTEMPFEPSEIMWSSVLN 620
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM---YLSFGNREEGEKVFSRMESKD 363
+ + + +L ++ + M +D+ P I M Y G + KV M +
Sbjct: 621 SCRIHKNHELAKKAADRLFNM---EDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 364 V-----VSW------TTMISCYEGSVLPDKAV-----ETYQMMEAEGSMPDEITIASVLS 407
V SW T + S + S K + + ME +G PD +
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPD--------T 729
Query: 408 ACACLGNLDLGIKLHQLAMRTG--LISYIII----ANTLIDMYSKCKCID--KALEVFHQ 459
CA L ++D IK+ L + I++ ++ + ++ M + C D A++V Q
Sbjct: 730 TCA-LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQ 788
Query: 460 IPDKNVI 466
I ++ +I
Sbjct: 789 IVEREII 795
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 231/464 (49%), Gaps = 19/464 (4%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G + HA F M R++ SW+ +I YA+ G +AL L+ RM GVK +
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDH-EGVKANAI 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLVFD 256
TF VL C + + GK +H ++ G D DV+ N ++ MY KCG++ AR VF+
Sbjct: 60 TFVSVLDACASLGAIALGKSIHERIVADGLLGD-DVILGNTIVNMYGKCGEVDLAREVFE 118
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
M ++ ++WN MI+ + Y + L M + P+ +TL SVI A +
Sbjct: 119 RMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISR 178
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR VH V G D +V N L+ +Y G +E++D +SWTT+++ Y
Sbjct: 179 GRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYAR 238
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A+ + M+ EG D T ++L +C + L LG ++H +G+ ++
Sbjct: 239 HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVL 298
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
L+DMY KC D A F ++ D ++V W +++ L ++ E L F +M L
Sbjct: 299 QTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQG 358
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHAL------RIGVAFDGFLPNALLDMYVRCG 548
+ P++VT +SIL ACA + AL G+ H+ L R VA L ++++MY +CG
Sbjct: 359 VAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCG 418
Query: 549 RMKPAWNQFNSNER----DVSAWNILLTGYAERGQGALAEEFFR 588
+ A +F R DV AW+ ++ Y++ G L+EE R
Sbjct: 419 SLADAKAEFAKARRARASDVVAWSAMVAAYSQFG---LSEEALR 459
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 183/354 (51%), Gaps = 4/354 (1%)
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY +CG ++ AR FD M R+ +SW+AMI+ Y + G L LF+ M V + +T
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV+ A +G LG+ +H ++ G DDV + N ++ MY G + +VF RM
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
E+K+ V+W TMI+ +A M+ +G P++IT+ SV+ ACA + ++ G
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
+H++ GL S +AN L+++Y KC + A I ++ ISWT+++ +
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240
Query: 480 RSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
A+ ++M +K +S T V++L +C I AL G+EIH G+ D L
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300
Query: 539 ALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
AL+DMY +CG A F+ + RDV+ WN LL Y R QG F +M
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARM 354
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 214/450 (47%), Gaps = 41/450 (9%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V LGN ++M+ K G++ A VF +M ++ +WN +I ++ + EA +L M
Sbjct: 94 VILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMD- 152
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G++P+ T V+ C + + RG+ VH V G E+D V NAL+ +Y KCG L
Sbjct: 153 LDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLR 212
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
AR +G+ RD+ISW +++ Y +G + + + M V D T +++ +
Sbjct: 213 AARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV 272
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWT 368
+ LG E+H + + G D + L+ MY GN + + F RM + +DV W
Sbjct: 273 AIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWN 332
Query: 369 TMISCYEGSVLPDKAVET---YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+++ Y VL D+ ET + M +G PD +T S+L ACA L L LG H
Sbjct: 333 ALLAAY---VLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRM 389
Query: 426 MRTGLI------SYIIIANTLIDMYSKCKCIDKALEVF---HQIPDKNVISWTSIILGLR 476
+ GL S ++ ++I+MY+KC + A F + +V++W++++
Sbjct: 390 LERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYS 449
Query: 477 LNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF--- 532
S EAL F+ +KP+SV+ VS ++ C+ H+ +R VAF
Sbjct: 450 QFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS-----------HSGLVREAVAFFTS 498
Query: 533 ----DGFLPN-----ALLDMYVRCGRMKPA 553
G P L+D+ R G ++ A
Sbjct: 499 LRHDHGIAPTEAHFACLVDLLSRAGWIREA 528
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 187/396 (47%), Gaps = 23/396 (5%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+++ C W + G +H +V+ + NA ++++ K G L A + +
Sbjct: 163 LVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIE 222
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD SW L+ YA+ G A+++ +RM GVK D +TF +L +C + L G+
Sbjct: 223 TRDKISWTTLLAAYARHGHGKRAIAVIKRMDH-EGVKLDSFTFVNLLESCVAIAALALGE 281
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFEN 276
E+H + G E D + AL+ MY KCG+ AR FD M RD WNA+++ Y
Sbjct: 282 EIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLR 341
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L +F M V PD +T S++ A + LGR H +++ G D +V
Sbjct: 342 DQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVA 401
Query: 337 NP------LIKMYLSFGNREEGEKVFS---RMESKDVVSWTTMISCYEGSVLPDKAVETY 387
+ +I MY G+ + + F+ R + DVV+W+ M++ Y L ++A+ +
Sbjct: 402 SADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCF 461
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT------LI 441
M+ EG PD ++ S ++ C+ G+ +A T L IA T L+
Sbjct: 462 YSMQQEGVKPDSVSFVSAIAGCS-----HSGLVREAVAFFTSLRHDHGIAPTEAHFACLV 516
Query: 442 DMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLR 476
D+ S+ I +A + + P + +W +++ R
Sbjct: 517 DLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACR 552
>gi|357475145|ref|XP_003607858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508913|gb|AES90055.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 708
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 261/526 (49%), Gaps = 31/526 (5%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD--EGLYLHSVVSKTMSHLS 129
+N L+ + +D+ E C + + + + +RLC YD E +H++ K S
Sbjct: 130 INSPLDASDVKIDNFAEKGECFNPETVAHWLRLC-----YDVEEVGRVHTIALKCFRGSS 184
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N + +++ G L A VF M R+ +W +I GY K DEA L+
Sbjct: 185 TYVDNNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSI- 243
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV+P+ F C + C DL GK++H +++ + ++ V +A++ Y KCG +
Sbjct: 244 KHGVQPNSKMFVCFMNLCCKRVDLALGKQIHARILKSNWR-NLIVDSAVVNFYSKCGKIS 302
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A FD M KRD + W +I+ ++G + L+L + ++LVD F ++ +A +
Sbjct: 303 SAFRTFDRMAKRDVVCWTTIITACSQHGLGHEALLL---LSQMLVDGFFPNEYTICAALK 359
Query: 310 LVGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
G+ K G ++HG ++K DV + LI MY G +KVF RM+ ++ +
Sbjct: 360 ACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTAT 419
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
WT++IS Y + ++A+ +++M+ + ++ T+ V++AC + +G ++H +
Sbjct: 420 WTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKI 479
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
++ +++ + I TL+ Y +CK A V IP ++V+SWT+II G EAL
Sbjct: 480 KSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALE 539
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F R+MM + PNS T S L ACA+ L + F+ +AL+ MY
Sbjct: 540 FLREMMEEGVLPNSYTYSSALKACAK--------------LETPALSNVFVNSALIYMYA 585
Query: 546 RCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A+ F N ER++ +W ++ GYA G A + +M
Sbjct: 586 KCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHCRKALQLMYRM 631
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 16/382 (4%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A ++ + K G + A+ F +M RD+ W +I ++ G EAL L +M V G
Sbjct: 289 SAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITACSQHGLGHEALLLLSQML-VDGF 347
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ YT L+ CG K G ++H +++ ++DV + +LI MY KCG++V ++
Sbjct: 348 FPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKK 407
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFD M R+ +W ++ISGY NG + L F +M+ V + TL V++A +
Sbjct: 408 VFDRMKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKA 467
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+GREVH IK ++ + L+ Y + V + +DVVSWT +IS
Sbjct: 468 SLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISG 527
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
L +A+E + M EG +P+ T +S L ACA + T +S
Sbjct: 528 CARLGLETEALEFLREMMEEGVLPNSYTYSSALKACA--------------KLETPALSN 573
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMM 492
+ + + LI MY+KC I A +VF +P++N++SW ++ILG N +AL + +R
Sbjct: 574 VFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHCRKALQLMYRMRA 633
Query: 493 LNLKPNSVTLVSILSACARIGA 514
+ L ++L+AC I +
Sbjct: 634 EGFVVDDYILTTVLTACGGIDS 655
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 193/391 (49%), Gaps = 6/391 (1%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
LR C V ++ R + + R G VD N LI Y++ G L +AR VFDGM +R+
Sbjct: 160 LRLCYDVEEVGRVHTIALKCFR-GSSTYVD--NNLICSYLRLGKLAQARKVFDGMSRRNT 216
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
++W A+I GY + + LF + V P+ ++ D LG+++H
Sbjct: 217 VTWTAIIDGYLKYDLDDEAFKLFHGSIKHGVQPNSKMFVCFMNLCCKRVDLALGKQIHAR 276
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
++K + + + V + ++ Y G + F RM +DVV WTT+I+ L +A
Sbjct: 277 ILKSNWRNLI-VDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITACSQHGLGHEA 335
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M +G P+E TI + L AC G +LH ++ S + I +LIDM
Sbjct: 336 LLLLSQMLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDM 395
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTL 502
Y+KC I + +VF ++ +N +WTSII G N EAL FFR M + N TL
Sbjct: 396 YAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTL 455
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
V +++AC I A + G+E+HA ++ + + ++ L+ Y RC A+N
Sbjct: 456 VCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPL 515
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMID 592
RDV +W +++G A G A EF R+M++
Sbjct: 516 RDVVSWTAIISGCARLGLETEALEFLREMME 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 174/382 (45%), Gaps = 26/382 (6%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G +AL L M +E + ++ C + + G LH + K + V +
Sbjct: 329 HGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFI 388
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + + M+ K G++ + VF +M R+ +W +I GYA+ GF +EAL+ + R+
Sbjct: 389 GTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFGEEALNFF-RLMKRKK 447
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T CV+ CG + G+EVH I+ ++ + L+ Y +C D A
Sbjct: 448 VYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAF 507
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
V +P RD +SW A+ISG G + L M E V P+ T SS + A +
Sbjct: 508 NVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKACAKLE 567
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
L +V V + LI MY G + +VF M +++VSW MI
Sbjct: 568 TPALS--------------NVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMIL 613
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL--GNLDLGIK-----LHQLA 425
Y + KA++ M AEG + D+ + +VL+AC + G++D ++ LH L
Sbjct: 614 GYARNGHCRKALQLMYRMRAEGFVVDDYILTTVLTACGGIDSGDIDWDLESSSHDLHSLP 673
Query: 426 MRTGLISYIIIANTLIDMYSKC 447
GL+ Y+ + + + YS C
Sbjct: 674 A-VGLMPYVKVESAI---YSGC 691
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 233/490 (47%), Gaps = 55/490 (11%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA LS + +F M +RD S+N LI G++ G ++ LY+ + V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P T ++ + D G VH V+R G+ A V + L+ MY K G + AR
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 254 VFDGMPK-------------------------------RDRISWNAMISGYFENGEYMKG 282
VF M RD I+W M++G +NG ++
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L +F MR V D T S+++A + + G+++H Y+ + + D+V V + L+ M
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y + E VF RM ++++SWT MI Y + ++AV + M+ +G PD+ T+
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
SV+S+CA L +L+ G + H LA+ +GL+ YI ++N L+ +Y KC I+ A +F ++
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+ +SWT+++ G ++ E + F KM+ N LKP+ VT + +LSAC+R G + G +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 522 HAHALRIGVAFD------GFLP-----NALLDMYVRCGRMKPAWNQFNS--NERDVSAWN 568
FD G +P ++D+Y R GR K A + D W
Sbjct: 503 ----------FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWA 552
Query: 569 ILLTGYAERG 578
LL+ RG
Sbjct: 553 TLLSSCRLRG 562
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 230/468 (49%), Gaps = 68/468 (14%)
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVD-VVNALITMYVKCGDLVRARLVFD---------- 256
GG ++ VH +++ +A ++N L+T Y K G L RAR VFD
Sbjct: 23 GGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR 82
Query: 257 ---------------------GMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
MP+RD +S+NA+I+G+ G + + L+ ++RE V
Sbjct: 83 NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P +TLS++I + + D LG VH V+++GF V +PL+ MY G + +
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202
Query: 355 VFSRMESK-------------------------------DVVSWTTMISCYEGSVLPDKA 383
VF ME+K D ++WTTM++ + L +A
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ ++ M AEG D+ T S+L+AC L L+ G ++H RT + + + L+DM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTL 502
YSKC+ I A VF ++ +N+ISWT++I+G N S EA+ F +M ++ +KP+ TL
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE- 561
S++S+CA + +L G + H AL G+ + NAL+ +Y +CG ++ A F+
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
D +W L+TGYA+ G+ + F KM+ + K + +G+ C
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 3/359 (0%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V + M +V + N ++ ++ + A +F M DRD +W ++ G + G EA
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L +++RM GV D YTF +L CG + L+ GK++H ++ R YE +V V +AL+
Sbjct: 263 LDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVD 321
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KC + A VF M R+ ISW AMI GY +N + + F M+ + PD T
Sbjct: 322 MYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
L SVIS+ + + G + H + G ++V N L+ +Y G+ E+ ++F M
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
D VSWT +++ Y + ++ ++ M A G PD +T VLSAC+ G ++ G
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD 501
Query: 421 -LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
+ G++ +ID+YS+ +A E Q+P + W +++ RL
Sbjct: 502 YFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 15/311 (4%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L NG +AL M+ + +D+ +++ C +EG +H+ +++T +
Sbjct: 253 LTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDN 312
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G+A + M+ K + A VF +M R++ SW +I GY + +EA+ + M
Sbjct: 313 VFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-Q 371
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ G+KPD +T V+ +C + L+ G + H + G + V NAL+T+Y KCG +
Sbjct: 372 MDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIE 431
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A +FD M D++SW A+++GY + G+ + + LF M + PD +T V+SA
Sbjct: 432 DAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS 491
Query: 310 LVGDEKLG-------REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ES 361
G + G ++ HG V DD C +I +Y G +E E+ +M S
Sbjct: 492 RAGLVEKGCDYFDSMQKDHGIVP----IDDHYTC--MIDLYSRSGRFKEAEEFIKQMPHS 545
Query: 362 KDVVSWTTMIS 372
D W T++S
Sbjct: 546 PDAFGWATLLS 556
>gi|297720781|ref|NP_001172752.1| Os01g0959600 [Oryza sativa Japonica Group]
gi|255674093|dbj|BAH91482.1| Os01g0959600 [Oryza sativa Japonica Group]
Length = 542
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 244/494 (49%), Gaps = 17/494 (3%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
S+ L N L+ + + G A + +M R+ S+N+LI Y++ G +L R
Sbjct: 42 SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA- 100
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV D +++ L C L+ G+ VH I G + V V N+L++MY KCG++
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VFD +RD +SWN+++SGY G + + +F MMR + + L SVI
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 309 ELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
GD + VHG VIK G DV + + +I MY G E +F ++ +VV
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 367 WTTMISCY------EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+ TMI+ + G + +A+ Y +++ G P E T +SVL AC G L+ G +
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ I + LID+Y C++ F P ++++WT+++ G N
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 481 SFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LP 537
+AL +F + LKP+ T+ S+++ACA + G++I A + G FD F +
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG--FDRFTVMG 458
Query: 538 NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSK-- 594
N+ + MY R G + A +F E DV +W+ +++ +A+ G A FF +M+D+K
Sbjct: 459 NSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVV 518
Query: 595 GNWRKLMGLFRKCQ 608
N +G+ C
Sbjct: 519 PNEITFLGVLTACS 532
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 212/393 (53%), Gaps = 10/393 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V + N+ +SM+ K G++G A VF +RD SWN L+ GY +AG +E + ++ M
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFA-MMR 202
Query: 190 VGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GG+ + + V++ C G D + + VH VI+ G ++DV +V+A+I MY K G
Sbjct: 203 RGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGA 262
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYM------KGLMLFIMMREVLVDPDFMTL 301
LV A +F + + + + +N MI+G+ + + L L+ ++ + P T
Sbjct: 263 LVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTF 322
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSV+ A L G + G+++HG VIK F +D + + LI +Y + G E+G + F
Sbjct: 323 SSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D+V+WT M+S + L +KA+ + G PD TI+SV++ACA L G ++
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
A ++G + ++ N+ + MY++ +D A F ++ +V+SW+++I + +
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+AL FF +M+ + PN +T + +L+AC+ G
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 179/366 (48%), Gaps = 11/366 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG---YDEGLYLHSV 120
NS ++ G+ E+ ++ M+ + ++ AL ++++ C RG D +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS-GRGDGTMDIAEAVHGC 237
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF--- 177
V K V L +A + M+ K G L A +F + + ++ +N +I G+ +
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297
Query: 178 ---DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
EAL+LY + G++P +TF VLR C L+ GK++H VI++ ++ D +
Sbjct: 298 EVASEALTLYSEV-QSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFI 356
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+ALI +Y G + F PK D ++W AM+SG +N + K L LF +
Sbjct: 357 GSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGL 416
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T+SSV++A + + G ++ + K GF + N + MY G+ + +
Sbjct: 417 KPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATR 476
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F MES DVVSW+ +ISC+ A+ + M +P+EIT VL+AC+ G
Sbjct: 477 RFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGL 536
Query: 415 LDLGIK 420
+D G++
Sbjct: 537 VDEGLR 542
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 233/430 (54%), Gaps = 15/430 (3%)
Query: 134 NAFLSMFVKFGDLG--HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N ++ + G LG +A+ VF D+ +WN ++ + + AL Y M
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
PD +TFP +L+ C + + K GK +H V+++ +D+ + L+ MY CGDL A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R +F+ M R+++ W +MISGY +N + L+L+ M E PD +T+++++SA +
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVC----NPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D +G ++H ++ +M D+ +C + L+ MY G+ + +VF ++ KDV +W
Sbjct: 194 KDLGVGMKLHSHIREM----DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAW 249
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ +I Y + +A++ ++ + +M P+E+TI +V+SACA LG+L+ G +H
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
RT + + N+LIDM+SKC ID A +F + K++ISW S++ GL L+ EAL
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALA 369
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI--HAHALRIGVAFDGFLPNALLDM 543
F M +L+P+ +T + +L+AC+ G + GK++ AL GV ++D+
Sbjct: 370 QFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL-YGVRLKSEHYGCMVDL 428
Query: 544 YVRCGRMKPA 553
R G + A
Sbjct: 429 LCRAGLLAEA 438
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 213/381 (55%), Gaps = 8/381 (2%)
Query: 235 VNALITMYVKCGDLV--RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+N LI + G L A VF D ++WN+M+ + + + L + M E
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 293 LVD-PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD T S++ L+ + K+G+ +HG V+K D+ + L+ MY + G+ +
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F RM ++ V WT+MIS Y + P++A+ Y+ ME +G PDE+T+A+++SACA
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
L +L +G+KLH + ++ + L++MY+KC + A +VF Q+ DK+V +W+++
Sbjct: 193 LKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSAL 252
Query: 472 ILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
I G NNRS EAL FR++ N++PN VT+++++SACA++G L G+ +H + R
Sbjct: 253 IFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ 312
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQG--ALAEEF 586
L N+L+DM+ +CG + A F+S + +D+ +WN ++ G A G G ALA+
Sbjct: 313 KGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFH 372
Query: 587 FRKMIDSKGNWRKLMGLFRKC 607
+ D + + +G+ C
Sbjct: 373 LMQTTDLQPDEITFIGVLTAC 393
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 209/420 (49%), Gaps = 11/420 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D +L++ C + G LH V K M H + + L+M+ GDL A ++F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
+M R+ W +I GY K +EAL LY++M G PD T ++ C + DL
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDL 196
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
G ++H H+ + + +AL+ MY KCGDL AR VFD + +D +W+A+I GY
Sbjct: 197 GVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGY 256
Query: 274 FENGEYMKGLMLFIMMREVL----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
+N + L LF REV + P+ +T+ +VISA +GD + GR VH Y+ +
Sbjct: 257 VKNNRSTEALQLF---REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
VS+ N LI M+ G+ + +++F M KD++SW +M++ L +A+ + +
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHL 373
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCK 448
M+ PDEIT VL+AC+ G + G KL +++ G+ ++D+ +
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433
Query: 449 CIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+ +A E +P + W S++ R+ N + E + +L L+P + + +LS
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYN-NLELGEEAARCLLELEPTNDGVYILLS 492
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 130/243 (53%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL M+E DE + LV C + G+ LHS + + + LG+A +
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+M+ K GDL A VF ++ D+D+++W+ LI GY K EAL L++ + ++P+
Sbjct: 223 NMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNE 282
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T V+ C + DL+ G+ VH ++ R V + N+LI M+ KCGD+ A+ +FD
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDS 342
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +D ISWN+M++G +G + L F +M+ + PD +T V++A G + G
Sbjct: 343 MSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402
Query: 318 REV 320
+++
Sbjct: 403 KKL 405
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 172/626 (27%), Positives = 278/626 (44%), Gaps = 88/626 (14%)
Query: 10 SQTPLRQNLRNPKTRIPETSFYFKP--KTRHFSSKNAQSVQV-LNTQNTSSI--ATKNPN 64
S L QN + F KP KT FS + V ++ T +I + N
Sbjct: 11 SPLTLNQNRKENFFSSQNGCFIHKPSLKTTFFSPIFRSCIPVRISATPTRTIDHQVTDYN 70
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK- 123
+++ C G LE A++ + Q+ + + ++++LC + +G +HS++
Sbjct: 71 AKILHFCQLGDLENAMELVCMCQKSEL--ETKTYGSVLQLCAGLKSLTDGKKVHSIIKSN 128
Query: 124 ------------------------------TMSHLSVRLGNAFLSMFVKFGDLGH----- 148
TM +V L N +S + K GD
Sbjct: 129 SVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 149 ---------------AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +F K+CDRD+ SWN +I GY G + L +Y++M ++G +
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-I 247
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D+ T VL C L GK VH I+ +E ++ N L+ MY KCGDL A
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ M +R+ +SW +MI+GY +G ++L M + V D + ++S++ A G
Sbjct: 308 VFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGS 367
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G++VH Y+ + ++ VCN L+ MY G+ E VFS M KD++SW TM+
Sbjct: 368 LDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE 427
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ PD T+A +L ACA L L+ G ++H +R G S
Sbjct: 428 LK---------------------PDSRTMACILPACASLSALERGKEIHGYILRNGYSSD 466
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+AN L+D+Y KC + A +F IP K+++SWT +I G ++ EA+ F +M
Sbjct: 467 RHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD 526
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
++P+ V+ +SIL AC+ G L G I + I + + ++D+ R G
Sbjct: 527 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA--CMVDLLSRTGN 584
Query: 550 MKPAWNQFNS--NERDVSAWNILLTG 573
+ A+ + D + W LL G
Sbjct: 585 LSKAYKFIETLPIAPDATIWGALLCG 610
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 223/488 (45%), Gaps = 75/488 (15%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
D + +N I + + G + A+ L + + + T+ VL+ C G+ L GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMEL---VCMCQKSELETKTYGSVLQLCAGLKSLTDGK 119
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK----------------- 260
+VH + D + L++ Y CGDL R VFD M K
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 261 ----------------------------------RDRISWNAMISGYFENGEYMKGLMLF 286
RD ISWN+MISGY NG +GL ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M + +D D T+ SV+ G LG+ VH IK F ++ N L+ MY
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G+ + +VF +M ++VVSWT+MI+ Y D A+ Q ME EG D + I S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSIL 359
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
ACA G+LD G +H + S + + N L+DMY+KC ++ A VF + K++I
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDII 419
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
SW + M+ LKP+S T+ IL ACA + AL GKEIH + L
Sbjct: 420 SWNT--------------------MVGELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEE 585
R G + D + NAL+D+YV+CG + A F+ +D+ +W +++ GY G G A
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 586 FFRKMIDS 593
F +M D+
Sbjct: 520 TFNEMRDA 527
>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Brachypodium distachyon]
Length = 739
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 234/458 (51%), Gaps = 27/458 (5%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF RD+ S+N ++ G EAL+ M G V+PD T L
Sbjct: 92 AAKVFHTARARDVSSYNTILSALPDRG---EALAFAAWMLRSGDVRPDAVTLTVALSLAA 148
Query: 209 GVPDLKRG--------KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
RG +++H R G ADV V NAL+T Y + L AR VFD MP
Sbjct: 149 -----SRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPA 203
Query: 261 RDRISWNAMISGYFENGE-YMKGLMLFIMMRE---VLVDPDFMTLSSVISASELVGDEKL 316
RD +SWNAMI G ++G+ + +++F+ + + V PD +++ SVI A G +L
Sbjct: 204 RDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIEL 263
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
GR+VH + +K+G VS+ N L+ MY G K+ M+ +DV+SWTT IS +G
Sbjct: 264 GRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS-MDG 322
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+ A+E + M +G P+E+T +++SA A G +H + ++TG+
Sbjct: 323 E---EDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAA 379
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
AN+LI MY+K + +D A VF ++P +I+W ++I G N EAL F M+ L+
Sbjct: 380 ANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRCLR 439
Query: 497 PNSVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
PN T S+LSA + ++ G+ H +L++G+ ++ AL+DMY + G ++ +
Sbjct: 440 PNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESR 499
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ + R + AW +++ +A+ G F M+
Sbjct: 500 KAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMV 537
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 255/540 (47%), Gaps = 57/540 (10%)
Query: 108 KRGYDEGLY----LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
RG +G++ LH++ S++ V +GNA ++ + + LG A VF +M RDL S
Sbjct: 149 SRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVS 208
Query: 164 WNVLIGGYAKAG-FFDEALSLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
WN +I G A+ G E + ++ R+ GG V+PD + V+ CG ++ G++VH
Sbjct: 209 WNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVH 268
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
++ G E V + N L+ MY K G AR + M +RD ISW IS +GE
Sbjct: 269 SFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS---MDGEE- 324
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ LF MR+ V P+ +T +++SA + G+ +H +K G SD+ + N LI
Sbjct: 325 DAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLI 384
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY ++ VF RM ++++W +IS Y + L ++A++ + M P+E
Sbjct: 385 TMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCM-VRCLRPNET 443
Query: 401 TIASVLSACACLGNLDL--GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T ASVLSA + + + G H +++ GL ++ LIDMY+K ++++ + F
Sbjct: 444 TFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFD 503
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+++I+WT+II + + F M+ + + P+ V L+S+L+AC GA+
Sbjct: 504 VTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNT 563
Query: 518 GKEIHAHALRIGVAFDGFLPN-----------ALLDMYVRCGRMKPAWN---QFNSNERD 563
G+EI FD ++DM R GR++ A Q +
Sbjct: 564 GREI----------FDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGP-S 612
Query: 564 VSAWNILL--------TGYAERGQGALAEE---------FFRKMIDSKGNWRKLMGLFRK 606
VSA LL T AER G L E + KG+W + + R+
Sbjct: 613 VSALQSLLGACRIHGNTSIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRRE 672
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 175/368 (47%), Gaps = 16/368 (4%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVK-CGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+H I G +A V N+L Y K A VF RD S+N ++S + G
Sbjct: 59 LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRG 118
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK---LGREVHGYVIKMGFSDDVS 334
E + M+R V PD +TL+ +S + G+ + R++H + G DV
Sbjct: 119 EALA--FAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVADVF 176
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAE 393
V N L+ Y +VF M ++D+VSW MI + P + + + + +
Sbjct: 177 VGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKD 236
Query: 394 GSM---PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
G PD I++ SV+ AC G ++LG ++H ++ G+ + I N L+ MY K
Sbjct: 237 GGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAA 296
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
A ++ + +++VISWT+ I + +A+ F M + + PN VT V+++SA
Sbjct: 297 GCARKLLKSMDERDVISWTTAI----SMDGEEDAIELFNGMRQDGVPPNEVTFVALMSAL 352
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWN 568
A G+ IH L+ GV+ + N+L+ MY + RM A F+ R ++ AWN
Sbjct: 353 AAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWN 412
Query: 569 ILLTGYAE 576
L++GYA+
Sbjct: 413 ALISGYAQ 420
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 9/384 (2%)
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF 153
D ++ +++ C + + G +HS K V +GN ++M+ K G G A +
Sbjct: 244 DRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLL 303
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDL 213
M +RD+ SW I + ++A+ L+ M GV P+ TF ++
Sbjct: 304 KSMDERDVISWTTAISMDGE----EDAIELFNGMRQ-DGVPPNEVTFVALMSALAAGCPA 358
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY 273
+ G+ +H ++ G + N+LITMY K + AR VFD MP+ + I+WNA+ISGY
Sbjct: 359 RYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGY 418
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSD 331
+N + L +F M L P+ T +SV+SA V + G H +K+G
Sbjct: 419 AQNELCNEALQVFSCMVRCL-RPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKV 477
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V LI MY G+ EE K F + +++WT +IS + D + + M
Sbjct: 478 SEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMV 537
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKCI 450
G PD + + SVL+AC G ++ G ++ + + + +IDM + +
Sbjct: 538 CSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYACVIDMLGRAGRL 597
Query: 451 DKALEVFHQIPDKNVISWTSIILG 474
++A E+ Q+P +S +LG
Sbjct: 598 EEAEELMLQMPTGPSVSALQSLLG 621
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E A++ + M++ + +E V L+ G +H+V KT N+
Sbjct: 324 EDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSL 383
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ K + A VF +M ++ +WN LI GYA+ +EAL ++ M V ++P+
Sbjct: 384 ITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCM--VRCLRPN 441
Query: 197 VYTFPCVLRTCGGVP--DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
TF VL V + G+ H ++ G + V ALI MY K G L +R
Sbjct: 442 ETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKA 501
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD R I+W A+IS + ++G Y + LF M V PD + L SV++A G
Sbjct: 502 FDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAV 561
Query: 315 KLGREV 320
GRE+
Sbjct: 562 NTGREI 567
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSK-CKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
LH LA+ +GL ++ + N+L Y+K A +VFH ++V S+ +I+ L +
Sbjct: 59 LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSA--LPD 116
Query: 480 RSFEALIFFRKMML--NLKPNSVTLVSILSACARIG---ALMCGKEIHAHALRIGVAFDG 534
R EAL F M+ +++P++VTL LS A G + +++HA A R G+ D
Sbjct: 117 RG-EALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVADV 175
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
F+ NAL+ Y R + A F+ RD+ +WN ++ G A+ G
Sbjct: 176 FVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDG 220
>gi|255563405|ref|XP_002522705.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538055|gb|EEF39667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 501
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 194/349 (55%), Gaps = 2/349 (0%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G++ +A VF D D+F WN +I Y + F A+ +Y RM + ++PD +TFP V
Sbjct: 92 GEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNLFCNAIEMYARM-QIACIRPDGFTFPLV 150
Query: 204 LRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
L+ C + L G+ VH R G EADV V N L+T Y KC + A +VF + R
Sbjct: 151 LKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNGLVTFYAKCRKISLANIVFGRLSDRS 210
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SW ++ISGY +NG+ ++ L +F MREV V PD + L SV+ A V D + G+ +HG
Sbjct: 211 IVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHG 270
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
VIKMG ++ + L MY G F ++ +++ W MIS Y + ++
Sbjct: 271 CVIKMGLEFEIDLLISLTAMYAKCGQVMFARLFFDQVRIPNLILWNAMISGYAKNGYAEE 330
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+E ++ M PD ITI SV+ ACA +G+L+L + R+ + +++ LID
Sbjct: 331 ALELFRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALID 390
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
M+SKC +D A +VF + DK+V+ W+S+I+G L+ R E++ F M
Sbjct: 391 MFSKCGSVDLARDVFDRALDKDVVLWSSMIMGYGLHGRGQESINLFEAM 439
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 183/360 (50%), Gaps = 7/360 (1%)
Query: 238 LITMYVKC----GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
LIT V C G++ AR VFD P D WNA+I Y + + ++ M+
Sbjct: 80 LITKLVNCCATLGEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNLFCNAIEMYARMQIAC 139
Query: 294 VDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ PD T V+ A + + +GR VHG + G DV V N L+ Y
Sbjct: 140 IRPDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNGLVTFYAKCRKISLA 199
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF R+ + +VSWT++IS Y + P +A+ + M PD+I + SVL A +
Sbjct: 200 NIVFGRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTDV 259
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+L+ G +H ++ GL I + +L MY+KC + A F Q+ N+I W ++I
Sbjct: 260 EDLEHGKSIHGCVIKMGLEFEIDLLISLTAMYAKCGQVMFARLFFDQVRIPNLILWNAMI 319
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G N + EAL FR+M+ +N P+S+T+ S++ ACA++G+L + + + R
Sbjct: 320 SGYAKNGYAEEALELFRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGRSEFR 379
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D F+ +AL+DM+ +CG + A + F+ + ++DV W+ ++ GY G+G + F M
Sbjct: 380 NDAFVSSALIDMFSKCGSVDLARDVFDRALDKDVVLWSSMIMGYGLHGRGQESINLFEAM 439
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 155/293 (52%), Gaps = 6/293 (2%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D G +H + V + N ++ + K + A VFG++ DR + SW +I GY
Sbjct: 162 DIGRRVHGQAFRHGLEADVFVQNGLVTFYAKCRKISLANIVFGRLSDRSIVSWTSIISGY 221
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
A+ G EAL ++ +M V VKPD VLR V DL+ GK +H VI+ G E +
Sbjct: 222 AQNGQPIEALRIFNQMREVN-VKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFE 280
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
+D++ +L MY KCG ++ ARL FD + + I WNAMISGY +NG + L LF M
Sbjct: 281 IDLLISLTAMYAKCGQVMFARLFFDQVRIPNLILWNAMISGYAKNGYAEEALELFRRMIT 340
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ PD +T++SVI A +G +L R + Y+ + F +D V + LI M+ G+ +
Sbjct: 341 MNFGPDSITITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALIDMFSKCGSVDL 400
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA--EGSMPDEITI 402
VF R KDVV W++MI Y L + E+ + EA + +P ++ I
Sbjct: 401 ARDVFDRALDKDVVLWSSMIMGYG---LHGRGQESINLFEAMRQAGIPLQLRI 450
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 3/256 (1%)
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ + G VF DV W +I CY L A+E Y M+ PD
Sbjct: 84 LVNCCATLGEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNLFCNAIEMYARMQIACIRPD 143
Query: 399 EITIASVLSAC-ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
T VL AC A L LD+G ++H A R GL + + + N L+ Y+KC+ I A VF
Sbjct: 144 GFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLEADVFVQNGLVTFYAKCRKISLANIVF 203
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
++ D++++SWTSII G N + EAL F +M +N+KP+ + LVS+L A + L
Sbjct: 204 GRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTDVEDLE 263
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
GK IH +++G+ F+ L +L MY +CG++ A F+ ++ WN +++GYA
Sbjct: 264 HGKSIHGCVIKMGLEFEIDLLISLTAMYAKCGQVMFARLFFDQVRIPNLILWNAMISGYA 323
Query: 576 ERGQGALAEEFFRKMI 591
+ G A E FR+MI
Sbjct: 324 KNGYAEEALELFRRMI 339
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG +AL+ + M+E+N+ D+ ALV+++R + G +H V K + L
Sbjct: 224 NGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEFEIDL 283
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +M+ K G + A F ++ +L WN +I GYAK G+ +EAL L++RM +
Sbjct: 284 LISLTAMYAKCGQVMFARLFFDQVRIPNLILWNAMISGYAKNGYAEEALELFRRMITM-N 342
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
PD T V+ C + L+ + + ++ R + D V +ALI M+ KCG + AR
Sbjct: 343 FGPDSITITSVILACAQMGSLELARWMSDYIGRSEFRNDAFVSSALIDMFSKCGSVDLAR 402
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE---------VLVDP-DFMTLS 302
VFD +D + W++MI GY +G + + LF MR+ +L+DP F L
Sbjct: 403 DVFDRALDKDVVLWSSMIMGYGLHGRGQESINLFEAMRQAGIPLQLRILLLDPGQFWDLK 462
Query: 303 SVI 305
S I
Sbjct: 463 SEI 465
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG E+AL+ M +N D + +++ C + ++ + +
Sbjct: 316 NAMISGYAKNGYAEEALELFRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGR 375
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A + MF K G + A VF + D+D+ W+ +I GY G E+++L
Sbjct: 376 SEFRNDAFVSSALIDMFSKCGSVDLARDVFDRALDKDVVLWSSMIMGYGLHGRGQESINL 435
Query: 184 YQRMFWVG 191
++ M G
Sbjct: 436 FEAMRQAG 443
>gi|255569325|ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535066|gb|EEF36748.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 765
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 220/410 (53%), Gaps = 33/410 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF ++ +L++WN LI +A + +L ++ RM + P+ +TFP
Sbjct: 78 FSSLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPF 137
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
V++ GV L + +H I+ +D+ ++N+LI Y CGDL A VF + ++D
Sbjct: 138 VIKAAAGVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKD 197
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SWN+MI G+ G K L LF +M+ V P+ +T+ V+SA D + GR V
Sbjct: 198 VVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCH 257
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM------------ 370
Y+ + G + +++V N ++ MY+ G+ E+ ++F +ME KD+ SWTTM
Sbjct: 258 YIERNGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDA 317
Query: 371 -------------------ISCYEGSVLPDKAVETYQMME-AEGSMPDEITIASVLSACA 410
IS YE P +A+ + ++ ++ + PDE+T+ S LSACA
Sbjct: 318 ARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACA 377
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
LG +D+G +H + + + +LIDMYSKC ++KAL++F+ + ++V W++
Sbjct: 378 QLGAIDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSA 437
Query: 471 IILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
+I GL ++ R A+ +FF ++PN+VT ++L AC+ G + G+
Sbjct: 438 MIAGLAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGR 487
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 217/425 (51%), Gaps = 47/425 (11%)
Query: 212 DLKRGKEVHVHVIRFG-----YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISW 266
+LK KE+H ++R G Y A A ++ + L AR VF+ + + + +W
Sbjct: 43 NLKHLKELHATILRSGLFFHPYNASKLFSVAALSSF---SSLDYARKVFEEISQPNLYTW 99
Query: 267 NAMISGYFENGEYMKGLMLFIMMREVLVDPDF---MTLSSVISASELVGDEKLGREVHGY 323
N +I + + E + L++FI M + PDF T VI A+ V + +HG
Sbjct: 100 NTLIRAFASSPEPIHSLLIFIRM--LYDSPDFPNKFTFPFVIKAAAGVASLPFSQAIHGM 157
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
IK D+ + N LI Y S G+ + VF ++E KDVVSW +MI + PDKA
Sbjct: 158 AIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCPDKA 217
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+E +Q+M+AE P+++T+ VLSACA +L+ G ++ R G+ + ++N ++DM
Sbjct: 218 LELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDM 277
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGL---------------------------- 475
Y K ++ A +F ++ +K++ SWT++I G
Sbjct: 278 YVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLI 337
Query: 476 ---RLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ + EAL F ++ L+ KP+ VTLVS LSACA++GA+ G IH + + +
Sbjct: 338 SAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDI 397
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ L +L+DMY +CG ++ A + F S + RDV W+ ++ G A G+G A + F +
Sbjct: 398 KLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAAIDLFFE 457
Query: 590 MIDSK 594
M ++K
Sbjct: 458 MQETK 462
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 33/317 (10%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + + GDL A+ VF K+ ++D+ SWN +I G+ G D+AL L+Q M V
Sbjct: 171 NSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCPDKALELFQLM-KAENV 229
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG------- 246
+P+ T VL C DL+ G+ V ++ R G ++ V NA++ MYVK G
Sbjct: 230 RPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDMYVKNGSLEDARR 289
Query: 247 ------------------------DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
D AR VFD MP++D +WN +IS Y ++G+ +
Sbjct: 290 LFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEA 349
Query: 283 LMLFIMMR-EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L +F ++ PD +TL S +SA +G +G +H Y+ K + + LI
Sbjct: 350 LAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSLID 409
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G E+ +F ++ +DV W+ MI+ A++ + M+ P+ +T
Sbjct: 410 MYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRPNAVT 469
Query: 402 IASVLSACACLGNLDLG 418
++L AC+ G ++ G
Sbjct: 470 FTNLLCACSHTGLVNEG 486
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 31/286 (10%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L G ++AL+ M+ N+ ++ +V ++ C K + G + + +
Sbjct: 202 NSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIER 261
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD----- 178
++++ + NA L M+VK G L A +F KM ++D+FSW +I GYAK FD
Sbjct: 262 NGINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSV 321
Query: 179 --------------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
EAL+++ + KPD T L C +
Sbjct: 322 FDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGA 381
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ G +HV++ + + + + +LI MY KCG++ +A +F + +RD W+AMI+G
Sbjct: 382 IDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAG 441
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+G + LF M+E V P+ +T ++++ A G GR
Sbjct: 442 LAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGR 487
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM--YSKCKCIDKALEVFHQIP 461
S++ C L +L +LH +R+GL + A+ L + S +D A +VF +I
Sbjct: 36 SLIDQCTNLKHLK---ELHATILRSGLFFHPYNASKLFSVAALSSFSSLDYARKVFEEIS 92
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACARIGALMCGK 519
N+ +W ++I + +L+ F +M+ + PN T ++ A A + +L +
Sbjct: 93 QPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAAGVASLPFSQ 152
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
IH A++ + D F+ N+L+ Y CG + A++ F E+DV +WN ++ G+ G
Sbjct: 153 AIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGG 212
Query: 579 QGALAEEFFR--KMIDSKGNWRKLMGLFRKC 607
A E F+ K + + N ++G+ C
Sbjct: 213 CPDKALELFQLMKAENVRPNDVTMVGVLSAC 243
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 222/397 (55%), Gaps = 10/397 (2%)
Query: 203 VLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
+LR C G+ D +G +VH ++++ G ++ N LI MY KC + + A VFD MP+
Sbjct: 12 ILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R+ +SW+A++SG+ NG+ L LF M + P+ T S+ + A L+ + G ++
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG+ +K+GF V V N L+ MY G E EKVF R+ + ++SW MI+ + +
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 381 DKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL--ISYIII 436
KA++T+ MM+ PDE T+ S+L AC+ G + G ++H +R+G S I
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+L+D+Y KC + A + F QI +K +ISW+S+ILG EA+ F+++ LN
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ +S L SI+ A L GK++ A A+++ + + N+++DMY++CG + A
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 556 QFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F + +DV +W +++TGY + G G + F +M+
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 277/515 (53%), Gaps = 27/515 (5%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+++R+C K D+G +H + K+ S L++ N + M+ K + A+ VF M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+R++ SW+ L+ G+ G +LSL+ M G+ P+ +TF L+ CG + L++G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G+E V+V N+L+ MY KCG + A VF + R ISWNAMI+G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 278 EYMKGLMLFIMMREVLVD--PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS--DDV 333
K L F MM+E + PD TL+S++ A G G+++HG++++ GF
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMME 391
++ L+ +Y+ G K F +++ K ++SW+++I Y EG + +A+ ++ ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV--EAMGLFKRLQ 305
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKC 449
S D ++S++ A L G ++ LA++ +GL + ++ N+++DMY KC
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGL 363
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSA 508
+D+A + F ++ K+VISWT +I G + +++ IF+ + N++P+ V +++LSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNSN--E 561
C+ G + G+E+ + L G P ++D+ R GR+K A + ++ +
Sbjct: 424 CSHSGMIKEGEELFSKLLET----HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSK 594
+V W LL+ G L +E + + ID+K
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 5/406 (1%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LNG L+ +L M I +E ++ C ++GL +H K + V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN+ + M+ K G + A VF ++ DR L SWN +I G+ AG+ +AL + M
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 192 -GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE--ADVDVVNALITMYVKCGDL 248
+PD +T +L+ C + GK++H ++R G+ + + +L+ +YVKCG L
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR FD + ++ ISW+++I GY + GE+++ + LF ++E+ D LSS+I
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+++ +K+ + SV N ++ MYL G +E EK F+ M+ KDV+SWT
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+I+ Y L K+V + M PDE+ +VLSAC+ G + G +L + T
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSII 472
G+ + ++D+ + + +A + +P K NV W +++
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 246/497 (49%), Gaps = 42/497 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ + + K+G + A +F KM +RD SWN +I ++ GF E L+ + M W G
Sbjct: 184 NSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEM-WNQGF 242
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+P+ T+ VL C + DL+ G +H ++R DV LI MY KCG L AR
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQ 302
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDG+ + + +SW ++I G + G + L+LF MREV V D TL++V+ D
Sbjct: 303 VFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKD 362
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+G ++H + I G V V N L+ MY G+ + F M +D++SWT MI+
Sbjct: 363 ISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITA 422
Query: 374 YE--GSV---------LPDKAVETYQMMEA--------------------EGSMPDEITI 402
+ G V +P++ V ++ M A EG D IT
Sbjct: 423 FSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITF 482
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
++ +SACA L L LG ++ A + G S + +AN+++ MYS+C I++A ++F I
Sbjct: 483 STSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVM 542
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK--PNSVTLVSILSACARIGALMCGKE 520
KN++SW +++ G N + + + F K MLN+ P+ ++ VS+LS C+ G + G+
Sbjct: 543 KNLVSWNAMMAGYAQNGQGRKVIEIFEK-MLNIGNVPDQISYVSVLSGCSHSGFVSEGQY 601
Query: 521 IHAHALR---IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYA 575
+ I + F+ ++D+ R G+++ A N N + + + W LL
Sbjct: 602 YFLSMTKDHGISPMSEHFV--CMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACR 659
Query: 576 ERGQGALAEEFFRKMID 592
G LAE + +++
Sbjct: 660 IHGNTKLAELAVKNLLE 676
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 252/536 (47%), Gaps = 72/536 (13%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM- 187
S+ L N L+M+ G + A+ VFG + +++SWN +I G+A +G EA L+++M
Sbjct: 38 SIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMP 97
Query: 188 -----FWVGGVKPDVYT--FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
W + + ++ G + LK ++H +F + D V +++
Sbjct: 98 ERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLD 157
Query: 241 MYVKCGDLVRARLVF-------------------------------DGMPKRDRISWNAM 269
MY+KCG + A+ VF MP+RD +SWN M
Sbjct: 158 MYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTM 217
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
IS ++G + L F+ M P+ MT +SV+SA + D + G +H +++M
Sbjct: 218 ISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEP 277
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
DV LI MY G E +VF + + VSWT++I + ++A+ +
Sbjct: 278 CLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQ 337
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC-- 447
M D+ T+A+VL C ++ +G +LH + GL S + +AN L+ MY+KC
Sbjct: 338 MREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGD 397
Query: 448 -----------------------------KCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++KA E F ++P++NVISW S++
Sbjct: 398 VWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQR 457
Query: 479 NRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
E L + +M+ +K + +T + +SACA + L+ G +I A A ++G + + +
Sbjct: 458 GYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVA 517
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N+++ MY RCG+++ A F+S +++ +WN ++ GYA+ GQG E F KM++
Sbjct: 518 NSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLN 573
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 207/402 (51%), Gaps = 36/402 (8%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +LH+ + + L V G + M+ K G L A VF + + + SW LIGG A+
Sbjct: 265 GAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQ 324
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AGF +EAL L+ +M V V D +T VL C D+ G+++H H I G ++ V
Sbjct: 325 AGFQEEALVLFNQMREV-PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVP 383
Query: 234 VVNALITMYVKC-------------------------------GDLVRARLVFDGMPKRD 262
V NAL+TMY KC GD+ +AR FD MP+R+
Sbjct: 384 VANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERN 443
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
ISWN+M++ Y + G + +GL ++I M V D++T S+ ISA + LG ++
Sbjct: 444 VISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILA 503
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
K+GFS +VSV N ++ MY G EE +K+FS + K++VSW M++ Y + K
Sbjct: 504 QAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRK 563
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--GLISYIIIANTL 440
+E ++ M G++PD+I+ SVLS C+ G + G + + L+M G+ +
Sbjct: 564 VIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEG-QYYFLSMTKDHGISPMSEHFVCM 622
Query: 441 IDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
+D+ + +++A + +Q+P K N W +++ R++ +
Sbjct: 623 VDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNT 664
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 204/429 (47%), Gaps = 42/429 (9%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
++ C + + +++H +I G ++ + + N L+ MY CG + A VF G+ +
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMT-------LSSVISASELVGDE 314
SWN MISG+ ++G+ + LF M R+ + M+ L + I AS +G
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR---------------- 358
KL ++HG+ K F D V ++ MY+ G + +KVF R
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 359 ---------------MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
M +D VSW TMIS + + T+ M +G P+ +T A
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYA 250
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
SVLSAC + +L+ G LH +R + LIDMY+KC ++ A +VF + +
Sbjct: 251 SVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEH 310
Query: 464 NVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIH 522
N +SWTS+I G+ EAL+ F +M + + + TL ++L C + G+++H
Sbjct: 311 NAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLH 370
Query: 523 AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGA 581
AH + G+ + NAL+ MY +CG + A + F RD+ +W ++T +++ G
Sbjct: 371 AHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVE 430
Query: 582 LAEEFFRKM 590
A E+F KM
Sbjct: 431 KAREYFDKM 439
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 47/362 (12%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL + M+E+ + D+ L ++ +C ++ G LH+ SV +
Sbjct: 326 GFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVA 385
Query: 134 NAFLSMFVKFGDL---GHAWYV----------------------------FGKMCDRDLF 162
NA ++M+ K GD+ HA+ + F KM +R++
Sbjct: 386 NALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVI 445
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN ++ Y + G+++E L +Y +M GVK D TF + C + L G ++
Sbjct: 446 SWNSMLATYMQRGYWEEGLKVYIQML-REGVKTDWITFSTSISACADLAVLILGNQILAQ 504
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ G+ ++V V N+++TMY +CG + A+ +F + ++ +SWNAM++GY +NG+ K
Sbjct: 505 AEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKV 564
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS------VC 336
+ +F M + PD ++ SV+S G G+ Y + M +S VC
Sbjct: 565 IEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQY---YFLSMTKDHGISPMSEHFVC 621
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTMISC---YEGSVLPDKAVETYQMMEA 392
++ + G E+ + + ++M K + W +++ + + L + AV+ ++A
Sbjct: 622 --MVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDA 679
Query: 393 EG 394
EG
Sbjct: 680 EG 681
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+ CA L ++ + KLH + GL S I + N L++MYS C I A VF I NV
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKM----------MLNLKPNSVTLVSILSACARIGAL 515
SW ++I G + + EA F KM M++ ++ L + + A +G L
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGY 574
++H A + D + ++LDMY++CG M A F + + WN ++ GY
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 575 AERGQGALAEEFFRKMIDSKG-NWRKLMGLFRK 606
++ G A E F KM + +W ++ + +
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQ 223
>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 598
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 226/435 (51%), Gaps = 6/435 (1%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L WN LI A +G + L Y + G+ D TFP + ++C + + G VH
Sbjct: 10 LRHWNRLIQLAAASGSYSRCLRHYVPLL-AAGLHGDASTFPSLAKSCAALRLPRLGCSVH 68
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
H + G +DV V+ +L+ MY KC L AR +FD MP ISWN M++ Y ++
Sbjct: 69 AHALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVT 128
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISAS-ELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + +F MR V V P TL ++S + + G ++GY +K G D+ V N +
Sbjct: 129 EAVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNSV 188
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ M + G + +F M K VV+W+ M+S + + K + M+ G D
Sbjct: 189 LTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFDS 248
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ + +++SA LGNL + +H L +++G S + ++L+++Y+KC ++ A EVF
Sbjct: 249 VALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFDA 308
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG 518
+ KNV+ WTS+I G +AL F M+ +++PN T+ S+LSACA +G+
Sbjct: 309 VHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQA 368
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN---SNERDVSAWNILLTGYA 575
K++ H + IG+ D + L+D Y +CG + A F+ + RD++ W+ ++ GYA
Sbjct: 369 KKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGYA 428
Query: 576 ERGQGALAEEFFRKM 590
G+G+ A F +M
Sbjct: 429 CIGEGSEALVLFNEM 443
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 232/443 (52%), Gaps = 9/443 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+GS + L++ + + D +L + C R G +H+ + V +
Sbjct: 23 SGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHALLVGAASDVFV 82
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ L M+ K L A +F +M L SWN ++ Y+K+ EA++++ M VG
Sbjct: 83 LTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAVAMFNTMRGVG- 141
Query: 193 VKPDVYTFPCVLRTCGGVPDLKR---GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V+P T +L G V L G ++ + ++ G + D+ V+N+++TM V+ G L
Sbjct: 142 VRPSGATLVGLLS--GRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNSVLTMLVRAGQLY 199
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A L+FD M ++ ++W+AM+SG+ + G+YMK LF M+ D + L ++ISA+
Sbjct: 200 DACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFDSVALVNLISAAV 259
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
L+G+ + + VH +IK GF + + + L+ +Y G+ E ++VF + K+VV WT+
Sbjct: 260 LLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFDAVHRKNVVLWTS 319
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y PDKA++ + M P+E T++SVLSACA LG+ + K+ + G
Sbjct: 320 MISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQAKKVEDHVVAIG 379
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQI--PDKNVISWTSIILGLRLNNRSFEALIF 487
L + +A LID Y KC + A E+F + ++++ W+++I G EAL+
Sbjct: 380 LQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGYACIGEGSEALVL 439
Query: 488 FRKMM-LNLKPNSVTLVSILSAC 509
F +M ++P+++ +L+AC
Sbjct: 440 FNEMQNQGVQPDAIVFTHLLTAC 462
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 195/391 (49%), Gaps = 4/391 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+ GL L+ K+ + + N+ L+M V+ G L A +F M ++ + +W+ ++ G+
Sbjct: 164 NPGLCLYGYSMKSGLDTDLPVLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGF 223
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
+ G + + L+ M G K D ++ + +L K VH +I+ G+E++
Sbjct: 224 LQTGDYMKVFGLFNHM-QTAGYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESE 282
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
D++++L+ +Y KCGDL A+ VFD + +++ + W +MISGY E G K L +F M
Sbjct: 283 QDLMSSLVNLYAKCGDLEAAQEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLC 342
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V+P+ T+SSV+SA +G ++V +V+ +G D+ V LI Y GN
Sbjct: 343 TDVEPNEATVSSVLSACANLGSANQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTL 402
Query: 352 GEKVFSRMES--KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
++F + + +D+ W+ MI+ Y +A+ + M+ +G PD I +L+AC
Sbjct: 403 AREIFDGVTTTNRDLAIWSAMINGYACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTAC 462
Query: 410 ACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
G +D G++ L + G+ I ID+ K + A E F +IP +
Sbjct: 463 NYSGLVDEGLQCFRSLTVEYGIEPSIEHYMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQV 522
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+ IL + + ++ + +LNL+P++
Sbjct: 523 LAPILTAYSAHCADSSIELVSEELLNLEPHN 553
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 168/354 (47%), Gaps = 5/354 (1%)
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
P WN +I +G Y + L ++ + + D T S+ + + +LG
Sbjct: 6 PTSTLRHWNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGC 65
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
VH + + +G + DV V L+ MY + ++F M S ++SW M++ Y S
Sbjct: 66 SVHAHALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSS 125
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSA-CACLGNLDLGIKLHQLAMRTGLISYIIIA 437
+AV + M G P T+ +LS L + G+ L+ +M++GL + + +
Sbjct: 126 CVTEAVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVL 185
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
N+++ M + + A +F + +K+V++W++++ G + F M K
Sbjct: 186 NSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYK 245
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
+SV LV+++SA +G L+ K +HA ++ G + L ++L+++Y +CG ++ A
Sbjct: 246 FDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEV 305
Query: 557 FNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
F++ R +V W +++GYAE G A + F M+ D + N + + C
Sbjct: 306 FDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSAC 359
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G + + MQ D ALVNL+ +H+++ K+ L
Sbjct: 226 TGDYMKVFGLFNHMQTAGYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDL 285
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
++ ++++ K GDL A VF + +++ W +I GYA+ G D+AL ++ M
Sbjct: 286 MSSLVNLYAKCGDLEAAQEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTD- 344
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ T VL C + + K+V HV+ G + D+ V LI Y KCG++ AR
Sbjct: 345 VEPNEATVSSVLSACANLGSANQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAR 404
Query: 253 LVFDGMP--KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+FDG+ RD W+AMI+GY GE + L+LF M+ V PD + + +++A
Sbjct: 405 EIFDGVTTTNRDLAIWSAMINGYACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNY 464
Query: 311 VG--DEKL 316
G DE L
Sbjct: 465 SGLVDEGL 472
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 218/410 (53%), Gaps = 10/410 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ V K+ + + + A + M+VK G + A+ +F KM R++ SWN +I G+++ G
Sbjct: 74 IHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGS 133
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D +L+ M V G +PD T + R L+ K VH I G +AD V N
Sbjct: 134 LDRVFNLFMGMRLV-GTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSN 192
Query: 237 ALITMYVKCGDLVRARLVFDGMPK--RDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
I Y KCG+L A++VF G+ K R +SWN++I+ Y G+Y+ + + + +L
Sbjct: 193 TWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSY---KGLLC 249
Query: 295 D---PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
D PD T+ S++S+ + G +HG+ ++G D+S+ N LI MY G+
Sbjct: 250 DGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISS 309
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F M + VSWT MIS Y D A+ + ME G PD +T+ S++S C
Sbjct: 310 ATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGK 369
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
G L LG + A L +++ N LIDMY+KC ++ A E+F+ +P++ V+SWT++
Sbjct: 370 TGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAM 429
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
I LN EAL F + + ++PN++T +++L AC G L G+E
Sbjct: 430 IAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRE 479
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 226/438 (51%), Gaps = 13/438 (2%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN I G G +AL+L+ ++ + G++P+ +TFP + + C + L + +H HV
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLK-LNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHV 78
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
++ + +D+ V A++ MYVKCG + A +FD MP R+ SWNAMI G+ + G +
Sbjct: 79 VKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVF 138
Query: 284 MLFIMMREVLVDPDFMTL----SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
LF+ MR V PD T+ +VISA L + + VH I+ G D SV N
Sbjct: 139 NLFMGMRLVGTRPDAATVIGLTRAVISAKSL----RFLKAVHAIGIETGLDADTSVSNTW 194
Query: 340 IKMYLSFGNREEGEKVFSRME--SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
I Y G + + VF ++ ++ VSW ++I+CY AV++Y+ + +G P
Sbjct: 195 IAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKP 254
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D TI S+LS+C L G +H + G S I + NTLI MYS+C I A +F
Sbjct: 255 DASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 314
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
+ + +SWT++I G R +AL+ F M KP+ VT++S++S C + GAL
Sbjct: 315 DGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALG 374
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G I +A + D + NAL+DMY +CG + A F S R V +W ++ A
Sbjct: 375 LGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACA 434
Query: 576 ERGQGALAEEFFRKMIDS 593
G+ A + F + +S
Sbjct: 435 LNGEFREALDLFSLLSES 452
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 218/447 (48%), Gaps = 11/447 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
GSL++ M+ + D ++ L R + +H++ +T +
Sbjct: 132 GSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVS 191
Query: 134 NAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
N +++ + K G+L A VF + R SWN LI YA G + +A+ Y+ +
Sbjct: 192 NTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLL-CD 250
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G KPD T +L +C L G +H H + G ++D+ ++N LI+MY +CGD+ A
Sbjct: 251 GFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSA 310
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++FDGM R +SW AMISGY E G L+LF M E PD +T+ S+IS
Sbjct: 311 TILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKT 370
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G LG + Y DV VCN LI MY G+ + ++F + ++ VVSWT MI
Sbjct: 371 GALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMI 430
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
+ + +A++ + ++ G P+ IT +VL AC G L+ G + + R G+
Sbjct: 431 AACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGI 490
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLRLNNRSFEALIF 487
+ + +ID+ + + +ALEV + PD+ + W +++ +++N + E +
Sbjct: 491 NPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGI--WGALLGACKIHN-NMEIGEY 547
Query: 488 FRKMMLNLKPN-SVTLVSILSACARIG 513
+ + L+P +V+ V + + A +G
Sbjct: 548 VSRYLFELQPRVAVSFVEMANIYASVG 574
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 235/459 (51%), Gaps = 27/459 (5%)
Query: 137 LSMFVKF------GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
LS V F G+L +A VF ++ L+ WN +I GY+ + DEAL++Y+ M
Sbjct: 40 LSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQ- 98
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
G PD +TFP VL+ C V G+ VH +++ G+E DV AL+ MY CGD+
Sbjct: 99 KGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEA 158
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VFD +PK + ++W ++I+G N + + ++ M V P+ +T+ +V+ A
Sbjct: 159 ALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACAR 218
Query: 311 VGDEKLGREVHGYVIKMGFSD-------DVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
D GR VH +MG +V + ++ MY G+ + +F++M ++
Sbjct: 219 SRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRN 278
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+V+W +MI Y ++A++ + M G PD+ T V+ ACA LG L G LH
Sbjct: 279 LVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHA 338
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+T L I L+DMY+K ++A +VF ++ K+V +WTS+I+GL ++ E
Sbjct: 339 YVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEE 398
Query: 484 ALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-- 539
AL FF+KM + L P+ +T + +LSAC+ +G + GK H +++ G P
Sbjct: 399 ALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKN-HFISMK---NVHGIEPTTQH 454
Query: 540 ---LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
++D+ R GR+ A E + + W+ LL G
Sbjct: 455 YGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNG 493
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 211/399 (52%), Gaps = 14/399 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM--YVKCGDLVRARLVFDGMPK 260
+L C + +LKR +H +I DV ++ L+ Y G+L A+ VF+ + +
Sbjct: 11 LLEKCKTMAELKR---LHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
WN+MI GY + + L ++ MR+ PD T V+ A LV LG+ V
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H ++K GF DV L++MY + G+ E KVF + +VV+WT++I+ + P
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY------- 433
+AV Y+ ME P+EIT+ +VL ACA +L+ G +H + GL +
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
+I+A ++DMY+KC + A ++F+++P +N+++W S+I ++ EAL F M +
Sbjct: 248 VILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 494 -NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
P+ T + ++ ACA +GAL+ G+ +HA+ + + D + AL+DMY + G +
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAER 367
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ ++DV+AW L+ G A G G A FF+KM
Sbjct: 368 AQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKM 406
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 212/426 (49%), Gaps = 15/426 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + ++ S ++AL M++ D +++ C GY+ G +H+ + K
Sbjct: 74 NSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVK 133
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
T + V A L M+ GD+ A VF + ++ +W LI G EA+ +
Sbjct: 134 TGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRV 193
Query: 184 YQRM-FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-------DVDVV 235
Y+ M W V P+ T VL C DL G+ VH + G + +V +
Sbjct: 194 YKDMELW--SVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILA 251
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
A++ MY KCG L AR +F+ MP R+ ++WN+MI Y + G+ + L LF MR D
Sbjct: 252 TAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFD 311
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD T VI A +G G+ +H YV K +DD ++ L+ MY G+ E ++V
Sbjct: 312 PDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQV 371
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGN 414
FS ++ KDV +WT++I ++A+ ++ M+ + ++ PDEIT VLSAC+ +G
Sbjct: 372 FSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGK 431
Query: 415 LDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G K H ++M+ G+ ++D+ S+ + +A + ++P + N W+++
Sbjct: 432 VEDG-KNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSAL 490
Query: 472 ILGLRL 477
+ G ++
Sbjct: 491 LNGCKI 496
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 225/434 (51%), Gaps = 4/434 (0%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+F WN + AG A+ + M + + D T VL G DL+ GK+V
Sbjct: 868 DVFCWNKKLSECLWAGDNWGAIECFVNMNGLN-IDYDAVTLLVVLAAVAGTDDLELGKQV 926
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H ++ G ++DV V N+L+ MY K G AR VF+ M D ISWN+MIS ++
Sbjct: 927 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 986
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ + LFI + + PD TL+SV+ A S L+ + R++H + +K G D V
Sbjct: 987 EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI +Y G EE E +F + D+ W M+ Y KA+E + ++ G D
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+IT+A+ AC CL LD G ++H A++ G S + + + ++DMY KC + A VF+
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMC 517
I + ++WTS+I G N +AL I+ R + P+ T +++ A + + AL
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
G+++HA+ +++ D F+ +L+DMY +CG ++ A+ F N R+++ WN +L G A+
Sbjct: 1227 GRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQ 1286
Query: 577 RGQGALAEEFFRKM 590
G A F+ M
Sbjct: 1287 HGNAEEAVNLFKSM 1300
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 258/508 (50%), Gaps = 15/508 (2%)
Query: 57 SIATKNP-----NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGY 111
S++ NP N +L+E G A++ +M LNI D DA+ LV L G
Sbjct: 861 SLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNI--DYDAVTLLVVLAAVA-GT 917
Query: 112 DE---GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
D+ G +H + K+ V + N+ ++M+ K G A VF M DL SWN +I
Sbjct: 918 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 977
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFG 227
A++ +E+++L+ + G +KPD +T VLR C + D L +++HVH ++ G
Sbjct: 978 SSCAQSSLEEESVNLFIDLLHEG-LKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG 1036
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
AD V LI +Y K G + A +F D WNAM+ GY + K L LF
Sbjct: 1037 NIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS 1096
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
++ + D +TL++ A + G+++H + IK GF D+ V + ++ MY+ G
Sbjct: 1097 LIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 1156
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ VF+ + + D V+WT+MIS + D+A+ Y M MPDE T A+++
Sbjct: 1157 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 1216
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A +C+ L+ G +LH ++ +S + +L+DMY+KC I+ A +F ++ +N+
Sbjct: 1217 ASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 1276
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHA 525
W ++++GL + + EA+ F+ M + ++P+ V+ + ILSAC+ G E +H+
Sbjct: 1277 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 1336
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPA 553
G+ + + L+D R G ++ A
Sbjct: 1337 NDYGIEPEIEHYSCLVDALGRAGLVQEA 1364
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 230/469 (49%), Gaps = 44/469 (9%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-----GFFDEALSLYQR 186
L N L+M+ K G L A VF +RDL +WN ++G YA + G E L L+ R
Sbjct: 658 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLF-R 716
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ T VL+ C L + VH + I+ G E DV V AL+ +Y KCG
Sbjct: 717 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 776
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ ARL+FD M +RD + WN M+ GY + G + LF + PD ++ +++
Sbjct: 777 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 836
Query: 307 A-SELVGDEK--LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
SE+ DE L +V Y K+ SDD NP D
Sbjct: 837 GVSEVNWDEGKWLADQVQAYAAKLSLSDD----NP------------------------D 868
Query: 364 VVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
V W +S + G A+E + M D +T+ VL+A A +L+LG ++
Sbjct: 869 VFCWNKKLSECLWAGDNW--GAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQV 926
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +A+++GL S + +AN+L++MYSK C A EVF+ + ++ISW S+I ++
Sbjct: 927 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 986
Query: 482 FEAL-IFFRKMMLNLKPNSVTLVSILSACAR-IGALMCGKEIHAHALRIGVAFDGFLPNA 539
E++ +F + LKP+ TL S+L AC+ I L ++IH HAL+ G D F+
Sbjct: 987 EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046
Query: 540 LLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFF 587
L+D+Y + G+M+ A F N ++ D++ WN ++ GY G A E F
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 237/483 (49%), Gaps = 33/483 (6%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H K V + A ++++ K G + A +F M +RD+ WN+++ GY + G
Sbjct: 749 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EA L+ F G++PD ++ +L V + GK + D V
Sbjct: 809 EKEAFQLFSE-FHRSGLRPDEFSVQLILNGVSEV-NWDEGKWL------------ADQVQ 854
Query: 237 ALITMYVKCGDLVRARLVF-DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
A A+L D P D WN +S G+ + F+ M + +D
Sbjct: 855 AYA-----------AKLSLSDDNP--DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNID 901
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
D +TL V++A D +LG++VHG +K G DVSV N L+ MY G +V
Sbjct: 902 YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GN 414
F+ M+ D++SW +MIS S L +++V + + EG PD T+ASVL AC+ L
Sbjct: 962 FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG 1021
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L++ ++H A++TG I+ +A TLID+YSK +++A +F D ++ W +++ G
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081
Query: 475 LRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+ N +AL F + + K + +TL + AC + L GK+IHAHA++ G D
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + +LDMY++CG M A FN S DV AW +++G + G A + +M
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV-AWTSMISGCVDNGNEDQALRIYHRMR 1200
Query: 592 DSK 594
S+
Sbjct: 1201 QSR 1203
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 200/408 (49%), Gaps = 6/408 (1%)
Query: 71 CLNGSLEQALK--YLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVSKTMSH 127
C SLE+ ++D + E + D L +++R C G + +H KT +
Sbjct: 980 CAQSSLEEESVNLFIDLLHE-GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNI 1038
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
+ + ++ K G + A ++F D DL WN ++ GY +AL L+ +
Sbjct: 1039 ADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS-L 1097
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
G K D T + CG + L +GK++H H I+ G+++D+ V + ++ MY+KCGD
Sbjct: 1098 IHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 1157
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+V A +VF+ + D ++W +MISG +NG + L ++ MR+ V PD T +++I A
Sbjct: 1158 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 1217
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
S V + GR++H VIK+ D V L+ MY GN E+ ++F +M +++ W
Sbjct: 1218 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 1277
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAM 426
M+ ++AV ++ M++ G PD ++ +LSAC+ G + LH +
Sbjct: 1278 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 1337
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
G+ I + L+D + + +A +V +P K S +LG
Sbjct: 1338 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 181/397 (45%), Gaps = 35/397 (8%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LRT +L GK H ++ G D + N L+TMY KCG L AR VFD P+RD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 263 RISWNAMISGYF-----ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++WNA++ Y +G +GL LF ++R L MTL+ V+ G
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
VHGY IK+G DV V L+ +Y G + +F M +DVV W M+ Y
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIII 436
L +A + + G PDE ++ +L+ + + N D G L Q+ +S
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLS---- 861
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK 496
L D C +K L D +W +I + +N LN+
Sbjct: 862 ---LSDDNPDVFCWNKKLSECLWAGD----NWGAIECFVNMNG-------------LNID 901
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
++VTL+ +L+A A L GK++H A++ G+ D + N+L++MY + G A
Sbjct: 902 YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961
Query: 557 FNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID 592
FN + D+ +WN +++ A Q +L EE ID
Sbjct: 962 FNDMKHLDLISWNSMISSCA---QSSLEEESVNLFID 995
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 282/602 (46%), Gaps = 76/602 (12%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
R++ LC NG + +AL + M NI + + +++ C ++R G +H+ + K
Sbjct: 5 RVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKG 64
Query: 126 SHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + K L A +F K+ R++FSW +IG + G + AL
Sbjct: 65 DFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG 124
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD + P V + CG + + G+ VH +V + G V V ++L MY
Sbjct: 125 FVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 183
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L AR VFD +P R+ ++WNA++ GY +NG + + L MR+ ++P +T+S+
Sbjct: 184 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVST 243
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SAS +G + G++ H I G D + ++ Y G E E +F M KD
Sbjct: 244 CLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKD 303
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV+W +IS Y L ++A+ Q+M E D +T+++++SA NL LG ++
Sbjct: 304 VVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 363
Query: 424 LAMRTGLISYI-------------------------------IIANTLIDMYSKCKCIDK 452
+R GL S I I+ NTL+ Y+ +
Sbjct: 364 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 423
Query: 453 ALEVFHQI------PD---------------------------------KNVISWTSIIL 473
AL +F+++ P+ N+ISWT+++
Sbjct: 424 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 483
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVA 531
GL N S EA++F RKM + L+PN+ T+ LSACA + +L G+ IH + +R +
Sbjct: 484 GLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYS 543
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F + +L+DMY +CG + A F S ++ +N +++ YA G+ A +R +
Sbjct: 544 FSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 603
Query: 591 ID 592
D
Sbjct: 604 ED 605
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 209/441 (47%), Gaps = 42/441 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ L M++ I + + G +EG H++ L L
Sbjct: 216 NGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 275
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L+ + K G + +A +F M ++D+ +WN+LI GY + G +EA+ + Q M
Sbjct: 276 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRR-EN 334
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D T ++ +LK GKE+ + IR G E+D+ + + + MY KCG +V A+
Sbjct: 335 LKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK 394
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD ++D I WN ++S Y ++G + L LF M+ V P+ +T
Sbjct: 395 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITW----------- 443
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK----DVVSWT 368
N +I L G E +++F +M+S +++SWT
Sbjct: 444 ------------------------NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWT 479
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM++ + ++A+ + M+ P+ TI LSACA L +L G +H +R
Sbjct: 480 TMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRN 539
Query: 429 GLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
S+ I +L+DMY+KC I+KA VF + + ++I L + EA+
Sbjct: 540 QQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITL 599
Query: 488 FRKMM-LNLKPNSVTLVSILS 507
+R + +KP+++T+ S+LS
Sbjct: 600 YRSLEDGGVKPDNITITSLLS 620
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLF----SWNVLIGGYAKAGFFDEALSLYQRMFW 189
N + ++ G + A +F +M +F SW ++ G + G +EA+ L+ R
Sbjct: 444 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAI-LFLRKMQ 502
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR---FGYEADVDVVNALITMYVKCG 246
++P+ +T L C + L G+ +H ++IR + + A ++ +L+ MY KCG
Sbjct: 503 ESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIET--SLVDMYAKCG 560
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ +A VF + +NAMIS Y G+ + + L+ + + V PD +T++S++S
Sbjct: 561 DINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 620
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVS 334
+ GR+V+ + FSD VS
Sbjct: 621 CN-------YGRDVNQAI--EVFSDMVS 639
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 243/498 (48%), Gaps = 75/498 (15%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-------FFD------ 178
L N L ++ KFG L A +F KM RD FSWN L+ YAK+G FD
Sbjct: 60 LHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRD 119
Query: 179 ------------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
E+L L++RM G +P YT +L + DL+ GK++H
Sbjct: 120 SVSYNTTIAGFSGNSCPQESLELFKRM-QREGFEPTEYTIVSILNASAQLLDLRYGKQIH 178
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+I + +V + NAL MY KCG++ +AR +FD + K++ +SWN MISGY +NG+
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K + L MR PD +T+S++I+A
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------------- 265
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y G +E +VFS + KD+V WT M+ Y + + A+ + M E PD
Sbjct: 266 --YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T++SV+S+CA L +L G +H ++ GL + +++++ LIDMYSKC ID A VF+ +
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P +NV+SW ++I+G N +AL F M+ KP++VT + ILSAC + G+
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443
Query: 520 EIH---AHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGY 574
E ++ + D + ++++ R GR++ A +++ D W+ LL+
Sbjct: 444 EYFDSISNQHGMTPTLDHYA--CMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSIC 501
Query: 575 AERGQGALAEEFFRKMID 592
+ +G AE R + +
Sbjct: 502 STKGDIVNAEVAARHLFE 519
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 191/361 (52%), Gaps = 37/361 (10%)
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
NAL++ Y K G + + FD MP RD +S+N I+G+ N + L LF M+ +
Sbjct: 93 NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P T+ S+++AS + D + G+++HG +I F +V + N L MY G E+ +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F + K++VSW MIS Y + P+K + M G MPD++T++++++A
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------- 265
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
Y +C +D+A VF + +K+++ WT++++G
Sbjct: 266 ----------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N R +AL+ F +M+L +++P+S TL S++S+CA++ +L G+ +H ++ G+ +
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357
Query: 535 FLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ +AL+DMY +CG + A + FN R+V +WN ++ G A+ G A E F M+
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417
Query: 594 K 594
K
Sbjct: 418 K 418
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 167/347 (48%), Gaps = 40/347 (11%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + NA M+ K G++ A ++F + ++L SWN++I GYAK G ++ + L +M
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM- 247
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
R G +PD ++ +I Y +CG +
Sbjct: 248 ----------------RLSGHMPDQV-------------------TMSTIIAAYCQCGRV 272
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR VF ++D + W AM+ GY +NG L+LF M ++PD TLSSV+S+
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+ VHG I G ++++ V + LI MY G ++ VF+ M +++VVSW
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392
Query: 369 TMI-SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAM 426
MI C + D A+E ++ M + PD +T +LSAC ++ G + ++
Sbjct: 393 AMIVGCAQNGHDKD-ALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISN 451
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII 472
+ G+ + ++++ + I++A+ + + D + + W++++
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 218/402 (54%), Gaps = 14/402 (3%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L C L + VH H+ + G AD+ V +L+ Y++C AR +FDGMP+R+
Sbjct: 84 LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERN 143
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W A+++GY N + GL +F+ M E+ P TL + ++A D LG++VHG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPD 381
Y IK G S+ N L +Y G+ + + F R+ K+V++WTTMIS C E +
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+ + M +G MP+E T+ SV+S C +L+LG ++ + + G + + + N+ +
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-----------LRLNNRSFEALIFFRK 490
+Y + D+A+ +F Q+ D ++I+W ++I G L+ +R F+AL FR
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + +KP+ T SILS C+ + AL G++IHA ++ G D + +AL++MY +CG
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGC 443
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F R W +++GY++ GQ A + F +M
Sbjct: 444 IQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 275/546 (50%), Gaps = 30/546 (5%)
Query: 74 GSLEQALKYLDSMQELNICVDEDAL-----VNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
G +E L+ LD + + + + A+ V L+ C +H ++KT +
Sbjct: 52 GGMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASA 111
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+ + + ++ +++ A +F M +R++ +W L+ GY L ++ M
Sbjct: 112 DMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
+G P YT L C D+ GK+VH + I++G E+ + N+L ++Y K G L
Sbjct: 172 EMGRY-PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMK-GLMLFIMMREVLVDPDFMTLSSVISA 307
A F +P+++ I+W MIS E+ E ++ G+ LFI M V P+ TL+SV+S
Sbjct: 231 DSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSL 290
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D LG++V + K+G ++ V N + +YL G +E ++F +ME +++W
Sbjct: 291 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 350
Query: 368 TTMISCYE---GSVLPD--------KAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
MIS Y S D +A+ ++ ++ PD T +S+LS C+ + L+
Sbjct: 351 NAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALE 410
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H +++G +S +++ + L++MY+KC CI A + F ++P + ++WTS+I G
Sbjct: 411 QGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYS 470
Query: 477 LNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
+ + EA+ F +M L ++PN +T VS+LSAC+ G L+ E + ++ +
Sbjct: 471 QHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAG-LVEEAEHYFDMMKKEYCIEPV 529
Query: 536 LPN--ALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + ++DM+VR GR++ A++ F NE + W+ L+ G G LA
Sbjct: 530 VDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE---AIWSSLVAGCRSHGNMELAFYAAD 586
Query: 589 KMIDSK 594
K+++ K
Sbjct: 587 KLLELK 592
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 20/405 (4%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
D G +H K + +GN+ S++ K G L A F ++ ++++ +W +I
Sbjct: 196 DLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISAC 255
Query: 172 AKAGFFDEALSLYQRMF---WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
A+ +E + L +F + GV P+ +T V+ CG DL GK+V + G
Sbjct: 256 AED---EECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGC 312
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK------- 281
E ++ V N+ + +Y++ G+ A +F+ M I+WNAMISGY + + K
Sbjct: 313 ETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARS 372
Query: 282 ----GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
L +F ++ ++ PD T SS++S + + G ++H IK GF DV V +
Sbjct: 373 RGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNS 432
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ MY G ++ K F M ++ V+WT+MIS Y P +A++ ++ M G P
Sbjct: 433 ALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA-NTLIDMYSKCKCIDKALEV 456
+EIT S+LSAC+ G ++ + + I ++ +IDM+ + ++ A
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
Query: 457 FHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV 500
+ + N W+S++ G R ++ + E + +L LKP +
Sbjct: 553 IKRTGFEPNEAIWSSLVAGCR-SHGNMELAFYAADKLLELKPKGI 596
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 229/466 (49%), Gaps = 36/466 (7%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
F +N LI GYA +G +EA+ L+ RM G+ PD YTFP L C G ++H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+++ GY D+ V N+L+ Y +CG+L AR VFD M +R+ +SW +MI GY
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 282 GLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ LF M+R+ V P+ +T+ VISA + D + G +V+ ++ G + + + L+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY+ + +++F + ++ M S Y L +A+ + +M G PD I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC----------- 449
++ S +S+C+ L N+ G H +R G S+ I N LIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 450 --------------------IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+D A E F +P+KN++SW +II GL + EA+ F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + + VT++SI SAC +GAL K I+ + + G+ D L L+DM+ RC
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G + A + FNS RDVSAW + A G A E F MI+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 252/515 (48%), Gaps = 36/515 (6%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C R G+ +H ++ K + + N+ + + + G+L A VF +M +R++ SW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
+I GYA+ F +A+ L+ RM V P+ T CV+ C + DL+ G++V+ +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G E + +V+AL+ MY+KC + A+ +FD + NAM S Y G + L
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+F +M + V PD +++ S IS+ + + G+ HGYV++ GF ++CN LI MY+
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ---------------- 388
++ ++F RM +K VV+W ++++ Y + D A ET++
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 389 ----------------MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
M EG D +T+ S+ SAC LG LDL ++ + G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + TL+DM+S+C + A+ +F+ + +++V +WT+ I + + + A+ F M+
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRM 550
LKP+ V V L+AC+ G + GKEI L++ GV+ + ++D+ R G +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 551 KPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+ A E + WN LL +G +A
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 201/397 (50%), Gaps = 10/397 (2%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---DLVRARLVFDG 257
P L+ C + +LK H + + G + DV + L+ + G L A+ VF+
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 258 MPKRDR-ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+N++I GY +G + ++LF+ M + PD T +SA +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++HG ++KMG++ D+ V N L+ Y G + KVF M ++VVSWT+MI Y
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 377 SVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
AV+ + +M+ E P+ +T+ V+SACA L +L+ G K++ +G+ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ + L+DMY KC ID A +F + N+ ++ + EAL F MM +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P+ ++++S +S+C+++ ++ GK H + LR G + NAL+DMY++C R A+
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + + V WN ++ GY E G+ A E F M
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 40/319 (12%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
MS+ +V N+ ++ +V+ G++ AW F M ++++ SWN +I G + F+EA+ ++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M GV D T + CG + L K ++ ++ + G + DV + L+ M+ +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CGD A +F+ + RD +W A I G + + LF M E + PD +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++A G + G+E+ ++K+ S +
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKL------------------------------HGVSPED 607
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI----K 420
V + M+ + L ++AV+ + M E P+++ S+L+AC GN+++ K
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPME---PNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 421 LHQLA-MRTGLISYIIIAN 438
+ LA RTG SY++++N
Sbjct: 665 IQVLAPERTG--SYVLLSN 681
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 229/466 (49%), Gaps = 36/466 (7%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
F +N LI GYA +G +EA+ L+ RM G+ PD YTFP L C G ++H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+++ GY D+ V N+L+ Y +CG+L AR VFD M +R+ +SW +MI GY
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 282 GLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+ LF M+R+ V P+ +T+ VISA + D + G +V+ ++ G + + + L+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY+ + +++F + ++ M S Y L +A+ + +M G PD I
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC----------- 449
++ S +S+C+ L N+ G H +R G S+ I N LIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 450 --------------------IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+D A E F +P+KN++SW +II GL + EA+ F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
M + + VT++SI SAC +GAL K I+ + + G+ D L L+DM+ RC
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
G + A + FNS RDVSAW + A G A E F MI+
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 252/515 (48%), Gaps = 36/515 (6%)
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C R G+ +H ++ K + + N+ + + + G+L A VF +M +R++ SW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
+I GYA+ F +A+ L+ RM V P+ T CV+ C + DL+ G++V+ +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLM 284
G E + +V+AL+ MY+KC + A+ +FD + NAM S Y G + L
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 285 LFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+F +M + V PD +++ S IS+ + + G+ HGYV++ GF ++CN LI MY+
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ---------------- 388
++ ++F RM +K VV+W ++++ Y + D A ET++
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 389 ----------------MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
M EG D +T+ S+ SAC LG LDL ++ + G+
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ + TL+DM+S+C + A+ +F+ + +++V +WT+ I + + + A+ F M+
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRM 550
LKP+ V V L+AC+ G + GKEI L++ GV+ + ++D+ R G +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 551 KPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+ A E + WN LL +G +A
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 200/397 (50%), Gaps = 10/397 (2%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG---DLVRARLVFDG 257
P L+ C + +LK H + + G + DV + L+ + G L A+ VF+
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 258 MPKRDR-ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+N++I GY +G + ++LF+ M + PD T +SA +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G ++HG ++KMG++ D+ V N L+ Y G + KVF M ++VVSWT+MI Y
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 377 SVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
AV+ + +M+ E P+ +T+ V+SACA L +L+ G K++ +G+ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ + L+DMY KC ID A +F + N+ ++ + EAL F MM
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++P+ ++++S +S+C+++ ++ GK H + LR G + NAL+DMY++C R A+
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ + + V WN ++ GY E G+ A E F M
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 40/319 (12%)
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
MS+ +V N+ ++ +V+ G++ AW F M ++++ SWN +I G + F+EA+ ++
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
M GV D T + CG + L K ++ ++ + G + DV + L+ M+ +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSV 304
CGD A +F+ + RD +W A I G + + LF M E + PD +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
++A G + G+E+ ++K+ S +
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKL------------------------------HGVSPED 607
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI----K 420
V + M+ + L ++AV+ + M E P+++ S+L+AC GN+++ K
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPME---PNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 421 LHQLA-MRTGLISYIIIAN 438
+ LA RTG SY++++N
Sbjct: 665 IQVLAPERTG--SYVLLSN 681
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 235/455 (51%), Gaps = 11/455 (2%)
Query: 146 LGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEALSLYQRMFW-VGGVKPDVYTFPC 202
LG A+ VF + RD+ SWN L+ ++ ALS ++ M V P ++F
Sbjct: 67 LGAAFAVFADIPAGLRDVASWNSLLNPLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAA 125
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEA---DVDVVNALITMYVKCGDLVRARLVFDGMP 259
V VP G H + + +V V AL+ MY K G + AR VFD MP
Sbjct: 126 VFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP 185
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
R+ +SW AM+SGY + LF +M++E ++ + ++V+SA + +G
Sbjct: 186 HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGV 245
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG V+K G VSV N L+ MY + VF + ++ ++W+ MI+ Y +
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNG 305
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
D A + M + G P E T +L+A + +G L +G + H L ++ G + + +
Sbjct: 306 EADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKS 365
Query: 439 TLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLK 496
L+DMY+KC C A + FHQ+ D +V+ WT++I G N EAL+ + +M +
Sbjct: 366 ALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVM 425
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ +T+ S+L ACA + AL GK++HA L+ G G + AL MY +CG ++ +
Sbjct: 426 PSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVV 485
Query: 557 FNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F +RD+ +WN +++G+++ G+G A + F +M
Sbjct: 486 FRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEM 520
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 208/387 (53%), Gaps = 2/387 (0%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
+V + A L+M+ K G + A VF +M R+ SW ++ GYA +EA L++ M
Sbjct: 157 NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
++ + + VL L G ++H V++ G V V N+L+TMY K +
Sbjct: 217 QECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF +R+ I+W+AMI+GY +NGE +F+ M P T +++AS
Sbjct: 277 DAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNAS 336
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSW 367
+G +G++ HG ++K+GF V V + L+ MY G + + F ++ + DVV W
Sbjct: 337 SDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIW 396
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI+ + + ++A+ Y M+ EG MP +T+ SVL ACACL L+ G +LH ++
Sbjct: 397 TAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILK 456
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G + L MYSKC ++ ++ VF ++PD+++ISW SII G + R +AL
Sbjct: 457 CGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDL 516
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIG 513
F +M L + P+ +T +++L AC+ +G
Sbjct: 517 FEEMKLEGIAPDHITFINVLCACSHMG 543
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 205/410 (50%), Gaps = 18/410 (4%)
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD--LVRARLVFDGMPK--RDRISWNAM 269
+ G +H ++ G + V N+LIT Y L A VF +P RD SWN++
Sbjct: 31 RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90
Query: 270 ISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
++ + + L F +M V P + ++V +A+ V G H + K+
Sbjct: 91 LNP-LSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKL 149
Query: 328 ---GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
S++V V L+ MY G + +VF +M ++ VSW M+S Y ++A
Sbjct: 150 PSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAF 209
Query: 385 ETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
E +++M E + +E +VLSA + L +G++LH L ++ GL+ ++ + N+L+ M
Sbjct: 210 ELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTM 269
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTL 502
Y+K +C+D A+ VF ++N I+W+++I G N + A F +M P T
Sbjct: 270 YAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--N 560
V IL+A + +GAL+ GK+ H +++G ++ +AL+DMY +CG A + F+ +
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
DV W ++TG+ + G+ A + +M D +G ++ + + R C
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRM-DKEGVMPSYLTVTSVLRAC 438
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+AL M + + + +++R C + G LH+ + K L +
Sbjct: 406 NGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSV 465
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A +M+ K G+L + VF +M DRD+ SWN +I G+++ G +AL L++ M + G
Sbjct: 466 GTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEM-KLEG 524
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRG 216
+ PD TF VL C + + RG
Sbjct: 525 IAPDHITFINVLCACSHMGLVDRG 548
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 270/545 (49%), Gaps = 13/545 (2%)
Query: 53 QNTSSIATKNPNSRLNELCLNGSLEQAL-KYLDSMQELNICVDEDALVNLVRLCEWKRGY 111
+ ++ T+ P + G + QAL +LD+ + CV AL+ ++++C
Sbjct: 12 KRSTKFPTRTPWTMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDR 71
Query: 112 DEGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
G LH++ + H +R+G + + M++ + + VF M R++ +W L+ G
Sbjct: 72 VLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTG 131
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
Y +AG + +SL+ RM GV P+ +TF VL + G+ VH I+FG +
Sbjct: 132 YIQAGVLLDVMSLFFRMR-AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCS 190
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
V V N+L+ MY KCG + AR+VF M RD +SWN +++G NG ++ L LF R
Sbjct: 191 TVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSR 250
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ T S+VI+ + L R++H V+K GF +V L+ Y G +
Sbjct: 251 SSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLD 310
Query: 351 EGEKVFSRME-SKDVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+ VF M S++VVSWT MI C + +P A + M +G P+++T +++L+
Sbjct: 311 KALDVFLLMSGSQNVVSWTAMIDGCIQNGDIP-LAAALFSRMREDGVAPNDLTYSTILT- 368
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
+ ++H ++T + L+ YSK ++AL +F I K+V+SW
Sbjct: 369 ---VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSW 425
Query: 469 TSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGA-LMCGKEIHAHAL 526
++++ A F KM M LKPN T+ S + ACA A + G++ HA ++
Sbjct: 426 SAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISI 485
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEE 585
+ + +AL+ MY R G ++ A F +RD+ +WN +L+GYA+ G A +
Sbjct: 486 KHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALD 545
Query: 586 FFRKM 590
FR+M
Sbjct: 546 VFRQM 550
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 208/456 (45%), Gaps = 14/456 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L LNG +AL+ + + E ++ LC + LHS V K
Sbjct: 227 NTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK 286
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALS 182
H + A + + K G L A VF M +++ SW +I G + G A +
Sbjct: 287 HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAA 346
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ RM GV P+ T+ +L V + ++H VI+ YE V AL+ Y
Sbjct: 347 LFSRMR-EDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSY 401
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K A +F + ++D +SW+AM++ Y + G+ FI M + P+ T+S
Sbjct: 402 SKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTIS 461
Query: 303 SVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S I A + LGR+ H IK D + V + L+ MY G+ E + VF R
Sbjct: 462 SAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTD 521
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D++SW +M+S Y KA++ ++ ME EG D +T SV+ CA G ++ G +
Sbjct: 522 RDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQY 581
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
L +R G+ + ++D+YS+ +D+ + + +P W +++ R+ +
Sbjct: 582 FDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRV-H 640
Query: 480 RSFEALIFFRKMMLNLKP----NSVTLVSILSACAR 511
++ E + +L+L+P V L +I SA +
Sbjct: 641 KNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGK 676
>gi|302775606|ref|XP_002971220.1| hypothetical protein SELMODRAFT_95215 [Selaginella moellendorffii]
gi|300161202|gb|EFJ27818.1| hypothetical protein SELMODRAFT_95215 [Selaginella moellendorffii]
Length = 492
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 237/482 (49%), Gaps = 23/482 (4%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A VF + DR++FSWN++I YA+ G +A +++R+ + GVKP
Sbjct: 1 MYGKCGKVDEARRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRID-LEGVKPSRV 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFDG 257
TF VL +C G L G E+H ++ G+E+DV AL+ MY +C GD AR VFDG
Sbjct: 60 TFLGVLDSCSGARGLAAGLEIHARMVEGGFESDVVACTALLNMYGRCSGDARAARAVFDG 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS-----------VIS 306
M RD +SWNA++ Y + + + + L+ M V PD SS VI
Sbjct: 120 MEVRDLVSWNAIVVVYSQKAQCEEAVKLYRQMLLQGVQPDEFVFSSRVKLDRVGYTSVID 179
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+G + GR +H + K G DV+V + L+ MY G+ E+ VF+ +E KD +
Sbjct: 180 TCTSLGALEEGRRIHSQIAKQGLETDVAVGSALVNMYGKCGDLEDARAVFAGIEGKDRCA 239
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQLA 425
WT+M+ Y D+A + +Q M+ EG D IT+ SVLS C+ + L G +H
Sbjct: 240 WTSMLGAYAQHGDGDRAFQVFQTMDLEGEKSDPITLISVLSVCSDKSSALSQGKAIHSSI 299
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEA 484
+GL ++A LIDMY+ C + A + F I K +V+ W++II G + E+
Sbjct: 300 SGSGLELDGLVATALIDMYATCGSLRTARDFFDAIQAKGDVVLWSAIISGYSQHGDWEES 359
Query: 485 LIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNAL 540
FR M L L+P++ T+ S+LSA + G + E A + A D ++ L
Sbjct: 360 TTLFRLMQLEGLEPDNRTITSVLSAFSHGGLVDQATEWFGTMVEACDMKPAIDHYM--CL 417
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWR 598
+D+ R G ++ A + D AW LL G +M D G +
Sbjct: 418 IDLLGRAGCLEAAELVMKRMPCKADTVAWTTLLGSCTTHGDVHRGARAAGQMRDDSGAYV 477
Query: 599 KL 600
L
Sbjct: 478 SL 479
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 28/319 (8%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D +++ C +EG +HS ++K V +G+A ++M+ K GDL A V
Sbjct: 169 LDRVGYTSVIDTCTSLGALEEGRRIHSQIAKQGLETDVAVGSALVNMYGKCGDLEDARAV 228
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +D +W ++G YA+ G D A ++Q M + G K D T VL C
Sbjct: 229 FAGIEGKDRCAWTSMLGAYAQHGDGDRAFQVFQTMD-LEGEKSDPITLISVLSVCSDKSS 287
Query: 213 -LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-PKRDRISWNAMI 270
L +GK +H + G E D V ALI MY CG L AR FD + K D + W+A+I
Sbjct: 288 ALSQGKAIHSSISGSGLELDGLVATALIDMYATCGSLRTARDFFDAIQAKGDVVLWSAII 347
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-- 328
SGY ++G++ + LF +M+ ++PD T++SV+SA HG ++
Sbjct: 348 SGYSQHGDWEESTTLFRLMQLEGLEPDNRTITSVLSAFS-----------HGGLVDQATE 396
Query: 329 -FSDDVSVCN--PLIKMYLSF-------GNREEGEKVFSRMESK-DVVSWTTMI-SCYEG 376
F V C+ P I Y+ G E E V RM K D V+WTT++ SC
Sbjct: 397 WFGTMVEACDMKPAIDHYMCLIDLLGRAGCLEAAELVMKRMPCKADTVAWTTLLGSCTTH 456
Query: 377 SVLPDKAVETYQMMEAEGS 395
+ A QM + G+
Sbjct: 457 GDVHRGARAAGQMRDDSGA 475
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 224/458 (48%), Gaps = 4/458 (0%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N + M+ K A VF ++ R+ FSW++L+ Y + + EAL +Y+ M
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR-K 62
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ D YT VL C + D++ G+ V G+E DV V +LI ++ KCG L A
Sbjct: 63 EISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEA 122
Query: 252 RLVFDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF M RD IS AMI Y +G+ L + MR ++PD T ++++ A
Sbjct: 123 ESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSS 182
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+ +H ++++ ++SV N LI MY G+ ++ + +F M+ KDVVSW M
Sbjct: 183 PDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAM 242
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y A + M G PD T +S+L ACA L+ G LH G
Sbjct: 243 IAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGF 302
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ N LI M+++C ++ A F+ I K + +W +++ ++ +AL ++
Sbjct: 303 DRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKN 362
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+L P+ T S++ +CA +GAL GK IH + G D L AL++MY +CG
Sbjct: 363 MLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGS 422
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
+ A F+ + +DV +W+ ++ A+ G A E
Sbjct: 423 LADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL 460
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 231/484 (47%), Gaps = 4/484 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++AL+ M I +D L +++ C +EG + + V +
Sbjct: 46 NAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVV 105
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ + +F K G L A VF M RD+ S +IG Y + G D AL Y +M
Sbjct: 106 ATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKM-RSQ 164
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++PD +T+ +L C L GK +H H++ + ++ V NALITMY KCG L +
Sbjct: 165 GLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDS 224
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+ +F M +D +SWNAMI+ Y G LF M + PD T SS++ A
Sbjct: 225 KSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASP 284
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ GR +H + GF D ++ N LI M+ G+ E + F +E K++ +W TM+
Sbjct: 285 KRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTML 344
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y A+ Y+ M EG PD T +SV+ +CA LG L G +H+ + G
Sbjct: 345 AAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFE 404
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+I+ L++MY+KC + A + F I +K+V+SW+++I + + EAL M
Sbjct: 405 KDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLM 464
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
L + N VT S+L AC+ G L G + + G+ D +D+ R G
Sbjct: 465 NLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGW 524
Query: 550 MKPA 553
+K A
Sbjct: 525 LKEA 528
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 183/364 (50%), Gaps = 3/364 (0%)
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D + N +I MY KC AR VFD + +R+ SW+ ++ Y +N Y + L ++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ D TLSSV++A + D + GR V ++GF DV V LI ++ G E
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 351 EGEKVFSRMES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E E VF M + +D++S T MI Y D A++TY M ++G PD T A++L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ L G +H+ + + I + N LI MY+KC + + +F + K+V+SW
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I L +A F +M L P+ T SIL ACA L G+ +H
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
G D + N L+ M+ RCG ++ A F S E +++ AWN +L YA+ +G A +
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 588 RKMI 591
+ M+
Sbjct: 361 KNML 364
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 205/405 (50%), Gaps = 14/405 (3%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
++ H + SK ++SVR NA ++M+ K G L + +F M +D+ SWN +I Y
Sbjct: 192 IHKHILESKHFGNISVR--NALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLY 249
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G +A SL+ RM +G PD+YTF +L C L+ G+ +HV + G++ D +
Sbjct: 250 GHDKDAFSLFHRMCTLGHT-PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAM 308
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
N LI+M+ +CG L AR F + K++ +WN M++ Y + + L L+ M
Sbjct: 309 QNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGF 368
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T SSV+ + +G + G+ +H GF DV + L+ MY G+ + +K
Sbjct: 369 TPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKK 428
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
F + +KDVVSW+ MI+ ++A+E +M +G +E+T +SVL AC+ G
Sbjct: 429 SFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGR 488
Query: 415 LDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSII 472
L GI L+ G+ ID+ + + +A V H +P K + ++ +++
Sbjct: 489 LYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLL 548
Query: 473 LGLRLNN--RSFEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
G +++ R +AL K ++ L+P + V L ++ +A R
Sbjct: 549 GGCKVHGDVRRGKALT---KRIVALEPENPGSYVLLNNMYAAAGR 590
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + L G + A M L D +++ C + ++G LH ++
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ N +SMF + G L A F + ++L +WN ++ YA+ +AL L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+ M + G PD +TF V+ +C + L+ GK +H G+E DV + AL+ MY
Sbjct: 360 YKNML-LEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A+ FDG+ +D +SW+AMI+ ++G + L L +M + + +T SS
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
V+ A GR G MG S D +
Sbjct: 479 VLHAC-----SHGGRLYEGIDYFMGLSQDFGI 505
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 270/541 (49%), Gaps = 46/541 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + + S +AL+ M + + L +++ C D+G H + K
Sbjct: 111 NTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVK 170
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N L M+ K G + A +F M + S+ ++GG A++G D+AL L
Sbjct: 171 VGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRL 230
Query: 184 YQRMFWVGGVKPDVYTFPCVL----RTCGGVPDLKRG----KEVHVHVIRFGYEADVDVV 235
+ RM ++ D VL + C G ++ R + +H V+R G+++D V
Sbjct: 231 FARMSR-SAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVG 289
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+LI MY K + A VF+ M +SWN +++GY + G Y + L + +M+E +
Sbjct: 290 NSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFE 349
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ +T S+++++ D R +
Sbjct: 350 PNEVTYSNMLASCIKARDVPSAR-----------------------------------AM 374
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F ++ V +W T++S Y L +E ++ M+ + PD T+A +LS C+ LG L
Sbjct: 375 FDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGIL 434
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++H +++ L + + +A+ LIDMYSKC + A +F+ + +++V+ W S+I GL
Sbjct: 435 ELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGL 494
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
+++ + EA FF++M N + P + S++++CAR+ ++ G++IHA L+ G +
Sbjct: 495 AIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNV 554
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++ ++L+DMY +CG M A FN +++ AWN ++ GYA+ G G A E F M+ +
Sbjct: 555 YVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTT 614
Query: 594 K 594
K
Sbjct: 615 K 615
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 228/467 (48%), Gaps = 46/467 (9%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA +S + GDL A + G+M DR+ SWN +I A++ EAL +Y+ M G +
Sbjct: 80 NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEG-L 138
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P +T VL CG V L G+ H ++ G + + V N L+ MY KCG + A
Sbjct: 139 APTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVR 198
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS--ASELV 311
+FD M + +S+ AM+ G ++G L LF M + D + +SSV+ A
Sbjct: 199 LFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACA 258
Query: 312 GDE------KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
GD +L + +H V++ GF D V N LI MY +E KVF M S +V
Sbjct: 259 GDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIV 318
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SW +++ Y ++A+E +M+ G P+E+T +++L++C
Sbjct: 319 SWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCI--------------- 363
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
K + + A +F +I +V +W +++ G + +
Sbjct: 364 --------------------KARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTI 403
Query: 486 IFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
FR+M N++P+ TL ILS C+R+G L GK++H+ ++++ + D F+ + L+DMY
Sbjct: 404 ELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMY 463
Query: 545 VRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+CG++ A FN ERDV WN +++G A A +FF++M
Sbjct: 464 SKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQM 510
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 218/453 (48%), Gaps = 45/453 (9%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
L +G+++ AL+ M I VD A+ +++ C D + +++++ L
Sbjct: 218 LAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALV 277
Query: 130 VR--------LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
VR +GN+ + M+ K + A VF M + SWN+L+ GY + G ++ AL
Sbjct: 278 VRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERAL 337
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ M G +P+ T+ +L +C
Sbjct: 338 EVLDLM-QESGFEPNEVTYSNMLASC---------------------------------- 362
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+K D+ AR +FD + K +WN ++SGY + + + LF M+ V PD TL
Sbjct: 363 -IKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTL 421
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ ++S +G +LG++VH +K+ +D+ V + LI MY G + +F+ M
Sbjct: 422 AVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTE 481
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+DVV W +MIS L ++A + ++ M G P E + AS++++CA L ++ G ++
Sbjct: 482 RDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQI 541
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G + + ++LIDMY+KC +D A F+ + KN+++W +I G N
Sbjct: 542 HAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFG 601
Query: 482 FEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
+A+ F M+ KP+SVT +++L+ C+ G
Sbjct: 602 EKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 634
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 185/374 (49%), Gaps = 4/374 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ +K D+ A +F K+ + +WN L+ GY + + + L++RM V+P
Sbjct: 358 MLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRM-QHQNVQP 416
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T +L TC + L+ GK+VH ++ D+ V + LI MY KCG + A+++F
Sbjct: 417 DRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIF 476
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ M +RD + WN+MISG + + F MRE + P + +S+I++ +
Sbjct: 477 NMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIP 536
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR++H V+K G+ +V V + LI MY GN ++ F+ M K++V+W MI Y
Sbjct: 537 QGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYA 596
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+ +KAVE ++ M PD +T +VL+ C+ G +D I + + G+ +
Sbjct: 597 QNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLV 656
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMML 493
LID + + + V ++P K + I W ++L + + + E F K +
Sbjct: 657 EHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILW-EVLLAACVVHHNAELGEFAAKHLF 715
Query: 494 NLKPNSVTLVSILS 507
L P + + +LS
Sbjct: 716 RLDPKNPSPYVLLS 729
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 78/431 (18%)
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY------------------- 242
C+ R+ G P K H V+ G AD ++N L+ +Y
Sbjct: 15 CIKRSGGPKPSRAHAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRP 74
Query: 243 ------------VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ GDL AR + MP R+ +SWN +I+ + + L ++ M
Sbjct: 75 NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGML 134
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ + P TL+SV+SA V GR HG +K+G + V N L+ MY G+
Sbjct: 135 QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVA 194
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC- 409
+ ++F M S + VS+T M+ S D A+ + M D + ++SVL AC
Sbjct: 195 DAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACA 254
Query: 410 -ACLGNLD------LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
AC G+ + L +H L +R G S + N+LIDMY+K +D+A++VF +
Sbjct: 255 QACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSS 314
Query: 463 KNVISWTSIILG---LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
+++SW ++ G L R+ E L ++ +PN VT ++L++C +
Sbjct: 315 VSIVSWNILVTGYGQLGCYERALEVLDLMQES--GFEPNEVTYSNMLASCIK-------- 364
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQ 579
A D A+ D KP+ V+ WN LL+GY +
Sbjct: 365 -----------ARDVPSARAMFDKIS-----KPS----------VTTWNTLLSGYGQEEL 398
Query: 580 GALAEEFFRKM 590
E FR+M
Sbjct: 399 HQDTIELFRRM 409
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 245/464 (52%), Gaps = 15/464 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N + M+ K G LG A VF +M R++ SW L+ G+ + G E+L L+ +M +
Sbjct: 9 LSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKM-GLS 67
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
GVKP+ +TF L+ CG + L G+++H ++ G++ V N++I MY KCG + A
Sbjct: 68 GVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEA 127
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ MP R+ ISWNAMI+GY G K L+LF M+EV D T +S + A +
Sbjct: 128 ACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDL 187
Query: 312 GDEKLGREVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G K G ++H ++I GF S + +V LI +Y+ G +VFS +E K V+SWT
Sbjct: 188 GAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTA 247
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I Y +++E ++ + D ++S++ A + G ++H A++
Sbjct: 248 LILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
I + N+++DMY KC I++A +F ++P +NVISWT +I G + EA+ F
Sbjct: 308 SGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFD 367
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA-----HALRIGVAFDGFLPNALLDM 543
+M L+ +P+ VT +++L C+ G + G+E + H ++ V ++D+
Sbjct: 368 EMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA----CMVDL 423
Query: 544 YVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
R GR+K A N +S E +V W LL+ G L +E
Sbjct: 424 LGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKE 467
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 199/368 (54%), Gaps = 4/368 (1%)
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ D+ + N LI MY KCG L A VFD M KR+ +SW A++ G+ +NG ++ L+LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M V P+ T S+ + A L+ +GR++H +K GF V N +I MY
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G E +F M ++++SW MI+ Y + +KA+ +Q M+ G DE T S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYI--IIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
AC+ LG + G ++H + G + + +A LID+Y KC + A VF I +K+
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHA 523
VISWT++ILG E++ FR++ +++ + L S++ A + GK++HA
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHA 301
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGAL 582
A+++ D + N++LDMY++CG + A F+ R+V +W +++TGY + G G
Sbjct: 302 FAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361
Query: 583 AEEFFRKM 590
A F +M
Sbjct: 362 AIRLFDEM 369
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 204/381 (53%), Gaps = 5/381 (1%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++ C G D G +H + KT + +GN+ + M+ K G + A +F M R+L
Sbjct: 80 LKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL 139
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SWN +I GY AGF ++AL L+Q+M VGG D +TF L+ C + +K G ++H
Sbjct: 140 ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGF-LDEFTFTSTLKACSDLGAIKEGNQIHA 198
Query: 222 HVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
+I G Y + V ALI +YVKCG L AR VF + ++ ISW A+I GY + G
Sbjct: 199 FLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNL 258
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
+ + LF +RE + D LSS++ + G+++H + IK+ D+SVCN +
Sbjct: 259 AESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSI 318
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MYL G E E++FS M +++V+SWT MI+ Y L +A+ + M+ + + PD+
Sbjct: 319 LDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDD 378
Query: 400 ITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T +VL C+ G ++ G + +L G+ + + ++D+ + + +A +
Sbjct: 379 VTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVD 438
Query: 459 QIP-DKNVISWTSIILGLRLN 478
+P + NV W +++ R++
Sbjct: 439 SMPLEANVGIWQTLLSACRVH 459
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 153/271 (56%), Gaps = 4/271 (1%)
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET 386
MGF D+ + N LI MY G VF RM ++VVSWT ++ + + P +++
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ M G P++ T ++ L AC L LD+G ++H + ++TG ++ N++IDMYSK
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C I++A +F +P +N+ISW ++I G + +AL+ F+KM + + T S
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 506 LSACARIGALMCGKEIHAHALRIGVAF--DGFLPNALLDMYVRCGRMKPAWNQFNS-NER 562
L AC+ +GA+ G +IHA + G + + + AL+D+YV+CG++ A F+ E+
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
V +W L+ GYA+ G A + E FR++ +S
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRES 271
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 55/392 (14%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS--VV 121
N+ + + G E+AL MQE+ +DE + ++ C EG +H+ +
Sbjct: 143 NAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLIT 202
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ ++ + A + ++VK G L A VF + ++ + SW LI GYA+ G E++
Sbjct: 203 GGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESM 262
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L+ R ++ D + ++ +++GK++H I+ D+ V N+++ M
Sbjct: 263 ELF-RQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDM 321
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y+KCG + A +F MP R+ ISW MI+GY ++G + + LF M+ +PD +T
Sbjct: 322 YLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTY 381
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+V+ LG G V E+G++ FSR+ S
Sbjct: 382 LAVL----------LGCSHSGLV-------------------------EKGQEYFSRLCS 406
Query: 362 -----KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA---SVLSACACLG 413
V + M+ L +A + SMP E + ++LSAC G
Sbjct: 407 YHGIKARVEHYACMVD------LLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460
Query: 414 NLDLGIKLHQLAMR---TGLISYIIIANTLID 442
+L+LG ++ + +R ++Y++++N D
Sbjct: 461 DLELGKEVGGILLRLDSENPVNYVMMSNIYAD 492
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
++++N LI MY KC + A +VF ++ +NV+SWT+++ G N E+L+ F KM L
Sbjct: 7 LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ +KPN T + L AC + L G++IH ++ G + N+++DMY +CGR+
Sbjct: 67 SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINE 126
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
A F R++ +WN ++ GY G A F+KM + G
Sbjct: 127 AACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGG 170
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 232/450 (51%), Gaps = 19/450 (4%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV--KPDVYTFPCVLRTCGGVPDLKRGKEV 219
FSWNV I G++++ +A+ Y++M G +PD +T+P + + C + G +
Sbjct: 44 FSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMI 103
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
HV + E V NA I M+ CG++ AR VFD P RD +SWN +I+GY + GE
Sbjct: 104 LGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEG 163
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
K + ++ +M V PD +T+ ++S+ ++GD G+E + YV G + + N L
Sbjct: 164 EKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANAL 223
Query: 340 IKMYLSFGNREEGEKVFSR-------------MESKDVVSWTTMISCYEGSVLPDKAVET 386
+ M+ G+ E ++F ME KDVV W MI + A+
Sbjct: 224 MDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALAL 283
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+Q M+ + PDEIT+ LSAC+ LG LD+GI +H+ + L + + +L+DMY+K
Sbjct: 284 FQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAK 343
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C I +AL VFH I +N +++T+II GL L+ + A+ +F +M+ + P+ +T + +
Sbjct: 344 CGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 403
Query: 506 LSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NER 562
LSAC G + G++ + R + + ++D+ R G ++ A S E
Sbjct: 404 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEA 463
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMID 592
D + W LL G G L E+ +K+++
Sbjct: 464 DAAVWGALLFGCRMHGNVKLGEKAAKKLLE 493
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 16/393 (4%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L ++C R G + V K L + NA + MF G++ +A VF + RD
Sbjct: 87 LFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRD 146
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN LI GY K G ++A+ +Y+ M GVKPD T ++ +C + DL RGKE +
Sbjct: 147 LVSWNCLINGYKKIGEGEKAIEVYKVM-ESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFY 205
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-------------DRISWN 267
+V G + + NAL+ M+ KCGD+ AR +FD + KR D + WN
Sbjct: 206 EYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWN 265
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
AMI G + L LF M+ DPD +T+ +SA +G +G +H Y+ K
Sbjct: 266 AMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKH 325
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
S +V++ L+ MY GN E VF +++++ +++T +I A+ +
Sbjct: 326 SLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYF 385
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSK 446
M G PDEIT +LSAC G + G Q+ R L + + ++D+ +
Sbjct: 386 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 445
Query: 447 CKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
+++A ++ +P + + W +++ G R++
Sbjct: 446 AGLLEEADKLMESMPMEADAAVWGALLFGCRMH 478
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 139/319 (43%), Gaps = 28/319 (8%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+A++ M+ + D+ ++ LV C + G + V +++ L
Sbjct: 161 GEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLA 220
Query: 134 NAFLSMFVKFGDLGHAWYVFGK-------------MCDRDLFSWNVLIGGYAKAGFFDEA 180
NA + MF K GD+ A +F M ++D+ WN +IGG +A +A
Sbjct: 221 NALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDA 280
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
L+L+Q M PD T L C + L G +H ++ + +V + +L+
Sbjct: 281 LALFQEM-QTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVD 339
Query: 241 MYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
MY KCG++ A VF G+ R+ +++ A+I G +G+ + F M + + PD +T
Sbjct: 340 MYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 399
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF-------GNREEGE 353
++SA G + GR+ Y +M ++ NP +K Y G EE +
Sbjct: 400 FIGLLSACCHGGMIQTGRD---YFSQMKSRFNL---NPQLKHYSIMVDLLGRAGLLEEAD 453
Query: 354 KVFSRME-SKDVVSWTTMI 371
K+ M D W ++
Sbjct: 454 KLMESMPMEADAAVWGALL 472
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 248/494 (50%), Gaps = 39/494 (7%)
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ F F L +A VF ++ +L+SWN+LI A + +++ ++ RM P+
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TFP +++ GK VH I+ + DV V+N+LI Y CG L A LVF+
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300
Query: 258 MP--KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ +D +SWN+M++G+ + G K L LF MR V P+ +T+ SV+SA +
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT------ 369
LGR+V Y+ + +++VCN I M++ G E +F ME +DVVSWTT
Sbjct: 361 LGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYA 420
Query: 370 -------------------------MISCYEGSVLPDKAVETYQMME--AEGSMPDEITI 402
+IS YE S P +A+ ++ ++ G+ PD++T+
Sbjct: 421 KMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTL 480
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
S LSACA LG +D+G +H + + +A +LIDMYSK ++KA+EVFH I +
Sbjct: 481 LSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN 540
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
K+V W+++I GL ++ R A+ F M +KPNSVT ++L AC+ G + GK +
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600
Query: 522 HAHALRI-GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERG 578
R+ GV + ++D+ R G ++ A SA W LL G
Sbjct: 601 FDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660
Query: 579 QGALAEEFFRKMID 592
LAE+ ++++
Sbjct: 661 NLELAEKACSRLLE 674
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 215/425 (50%), Gaps = 46/425 (10%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITM--YVKCGDLVRARLVFDGMPKRDRISWNAMI 270
K+ K++H ++R D + L T + L AR VFD +P+ + SWN +I
Sbjct: 152 FKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILI 211
Query: 271 SGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEK---LGREVHGYVIK 326
+ + ++ +++FI M+ + P+ T +I A V + + +G+ VHG IK
Sbjct: 212 RALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKA---VAERRCFLVGKAVHGMAIK 268
Query: 327 MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVSWTTMISCYEGSVLPDKAV 384
F DDV V N LI Y S G+ + VF +E +KD+VSW +M++ + PDKA+
Sbjct: 269 TSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKAL 328
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ ++ M EG P+ +T+ SV+SACA NL LG K+ R ++ + + N IDM+
Sbjct: 329 DLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMF 388
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSII-------------------------------L 473
KC ++ A +F + ++V+SWT+II
Sbjct: 389 VKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLIS 448
Query: 474 GLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
G + R EAL FR++ L +P+ VTL+S LSACA++GA+ G+ IH + + +
Sbjct: 449 GYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERI 508
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ L +L+DMY + G ++ A F+S +DV W+ ++ G A G+G A E F
Sbjct: 509 QLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLD 568
Query: 590 MIDSK 594
M +++
Sbjct: 569 MQETQ 573
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 37/397 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CD 158
L++ +R + G +H + KT V + N+ + + G L A+ VF + +
Sbjct: 246 LIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNN 305
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+D+ SWN ++ G+ + G+ D+AL L++RM GV P+ T V+ C +L G++
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMR-NEGVHPNAVTMVSVMSACAKTMNLTLGRK 364
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS------------- 265
V ++ R +++V NA I M+VKCG++ AR +FD M KRD +S
Sbjct: 365 VCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSE 424
Query: 266 ------------------WNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVI 305
WN +ISGY ++G + L +F + + + PD +TL S +
Sbjct: 425 HGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTL 484
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA +G +G +HGY+ K + ++ LI MY G+ E+ +VF + +KDV
Sbjct: 485 SACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVF 544
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W+ MI+ + A+E + M+ P+ +T ++L AC+ G +D G +L
Sbjct: 545 VWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEM 604
Query: 426 MRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
R G++ + ++D+ + +++AL+ +P
Sbjct: 605 ERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMP 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 149/319 (46%), Gaps = 38/319 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKM--YLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+++H +++ D + L + SF + KVF ++ ++ SW +I
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215
Query: 376 GSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S P ++V + +M+ P++ T ++ A A +G +H +A++T +
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ N+LI Y+ C +D A VF I +K+++SW S++ G +AL F +M
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335
Query: 493 -LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ PN+VT+VS++SACA+ L G+++ + R + + + NA +DM+V+CG ++
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395
Query: 552 PAWNQFNSNER--------------------------------DVSAWNILLTGYAERGQ 579
A F++ E+ D+ AWN+L++GY + G+
Sbjct: 396 IARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR 455
Query: 580 GALAEEFFRKMIDSKGNWR 598
A FR++ +K R
Sbjct: 456 PKEALAIFRELQLTKSGAR 474
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 69/391 (17%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G ++AL + M+ + + +V+++ C G + + +
Sbjct: 312 NSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDR 371
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK---------- 173
+++ + NA + MFVK G++ A +F M RD+ SW +I GYAK
Sbjct: 372 NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDI 431
Query: 174 ---------------------AGFFDEALSLYQRM-FWVGGVKPDVYTFPCVLRTCGGVP 211
+G EAL++++ + G +PD T L C +
Sbjct: 432 FDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLG 491
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
+ G+ +H ++ + + + ++ +LI MY K GD+ +A VF + +D W+AMI+
Sbjct: 492 AMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIA 551
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G +G + LF+ M+E V P+ +T ++++ A G
Sbjct: 552 GLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSG------------------- 592
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISCYEGSV-LPDKAVETYQM 389
L+ +EG+++F ME VV T SC + E +
Sbjct: 593 -------LV---------DEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF 636
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIK 420
+E P ++L AC GNL+L K
Sbjct: 637 IEGMPLAPSASVWGALLGACCIHGNLELAEK 667
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 243/469 (51%), Gaps = 14/469 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
+ N+ L+M+ K G + A VF M RDL SW + + G EAL L M
Sbjct: 81 VANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEML-E 139
Query: 191 GGVKPDVYTFPCVLRTC-GGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDL 248
G++P+ +T C G G V I+ G+ DV V ALI M+ + GDL
Sbjct: 140 SGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDL 199
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
V AR VF+G+ +R + W MI+ Y + G K + LF+ M E +PD T+SS++SA
Sbjct: 200 VAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSAC 259
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE---KVFSRMESKDVV 365
G LG+++H V+++G D V L+ MY + E KVF RM + +V+
Sbjct: 260 AEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVM 319
Query: 366 SWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
SWT +IS Y + + AVE M E P+ +T +S+L ACA L + D G ++H
Sbjct: 320 SWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHAR 379
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
M+T + + ++ N L+ MY++ C+++A + F Q+ ++N++S +S I +N S+ +
Sbjct: 380 VMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSS 439
Query: 485 LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
I +++ ++ T S+LSA A +G G+++HA +++ G D + N+L+ MY
Sbjct: 440 QI----ESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMY 495
Query: 545 VRCGRMKPAWNQFNSNERD--VSAWNILLTGYAERGQGALAEEFFRKMI 591
RCG + A F+ E D V +W +++ A+ G A F MI
Sbjct: 496 SRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMI 544
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 209/397 (52%), Gaps = 12/397 (3%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +G A + MF + GDL A VF + +R + W ++I Y + G +A+ L+ M
Sbjct: 183 VSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML- 241
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC---G 246
G +PD YT ++ C G+++H V+R G +D V L+ MY K
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFE-NGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
+ AR VF MP + +SW A+ISGY + G+ + L M ++P+ +T SS++
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
A + D+ GR++H V+K + V N L+ MY G EE K F ++ ++++
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLL 421
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
S ++ I G A + Q +E+ T AS+LSA A +G G +LH L+
Sbjct: 422 STSSDI----GETGRSNASWSSQ-IESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALS 476
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEA 484
++TG S I+N+L+ MYS+C +D A F ++ D NVISWTSII L + + A
Sbjct: 477 IKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERA 536
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
L F M+L+ +KPN VT +++LSAC+ +G + GKE
Sbjct: 537 LSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKE 573
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 185/340 (54%), Gaps = 12/340 (3%)
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFI 287
+AD V N+L+TMY KCG + AR VFDGM RD +SW AM NG + L+L
Sbjct: 76 DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135
Query: 288 MMREVLVDPDFMTLSSVISA---SELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMY 343
M E + P+ TL + A EL G V G+ IK GF DVSV LI M+
Sbjct: 136 EMLESGLRPNAFTLCAAAHACFPGELF--RSSGGTVLGFAIKTGFWGTDVSVGCALIDMF 193
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G+ KVF+ + + VV WT MI+ Y KAVE + M +G PD T++
Sbjct: 194 ARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC---KCIDKALEVFHQI 460
S++SACA G+ LG +LH L +R GL+S ++ L+DMY+K + ++ A +VF ++
Sbjct: 254 SMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM 313
Query: 461 PDKNVISWTSIILG-LRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCG 518
P NV+SWT++I G ++ + A+ +M+ +++PN +T S+L ACA + G
Sbjct: 314 PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSG 373
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
++IHA ++ + + NAL+ MY G M+ A F+
Sbjct: 374 RQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFD 413
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 210/444 (47%), Gaps = 20/444 (4%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT--MSHLSVR 131
G +A++ M E D + ++V C + G LHS+V + +S V
Sbjct: 228 GCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVS 287
Query: 132 LGNAFLSMFVKFG---DLGHAWYVFGKMCDRDLFSWNVLIGGYAK-AGFFDEALSLYQRM 187
G + M+ K + A VF +M ++ SW LI GY + G + A+ L M
Sbjct: 288 CG--LVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEM 345
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV-NALITMYVKCG 246
++P+ T+ +L+ C + D G+++H V++ +V+VV NAL++MY + G
Sbjct: 346 L-NESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSI-GNVNVVGNALVSMYAESG 403
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ AR FD + +R+ +S ++ I E G I +V V T +S++S
Sbjct: 404 CMEEARKAFDQLYERNLLSTSSDIG---ETGRSNASWSSQIESMDVGVST--FTFASLLS 458
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVV 365
A+ VG G+++H IK GF D + N L+ MY G ++ + F ME +V+
Sbjct: 459 AAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVI 518
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQL 424
SWT++IS ++A+ + M G P+++T +VLSAC+ +G + G + +
Sbjct: 519 SWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSM 578
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFE 483
LI + ++D+ ++ + +ALE +++P K + + W +++ R + E
Sbjct: 579 QKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACR-TYENIE 637
Query: 484 ALIFFRKMMLNLKPNSVTLVSILS 507
+ +++L+P +LS
Sbjct: 638 IGEIAARHVIDLEPQDPAPYVLLS 661
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
Query: 316 LGREVHGYVIKMGFSD-DVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMISC 373
LGR +H ++ D D V N L+ MY G+ +VF M +D+VSWT M C
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL--DLGIKLHQLAMRTGLI 431
+ +A+ M G P+ T+ + AC G L G + A++TG
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACF-PGELFRSSGGTVLGFAIKTGFW 179
Query: 432 -SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + + LIDM+++ + A +VF+ + ++ V+ WT +I + +A+ F
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC-- 547
M+ + +P+ T+ S++SACA G+ G+++H+ LR+G+ D + L+DMY +
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299
Query: 548 -GRMKPAWNQFNS-NERDVSAWNILLTGYAE-RGQGALAEEFFRKMID 592
M+ A F +V +W L++GY + GQ A E +M++
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLN 347
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 242/453 (53%), Gaps = 27/453 (5%)
Query: 152 VFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGV 210
+F + D+ D+FSWN +I A++G EAL + M + + P +FPC ++ C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSL 89
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
D+ GK+ H FGY++D+ V +ALI MY CG L AR VFD +PKR+ +SW +MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDP---------DFMTLSSVISASELVGDEKLGREVH 321
GY NG + + LF +++LVD D M L SVISA V + L +H
Sbjct: 150 RGYDLNGNALDAVSLF---KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 322 GYVIKMGFSDDVSVCNPLIKMYLSFGNREEG-----EKVFSRMESKDVVSWTTMISCYEG 376
+VIK GF VSV N L+ Y G EG K+F ++ KD VS+ +++S Y
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGG---EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 377 SVLPDKAVETYQMMEAEGSMP-DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
S + ++A E ++ + + + IT+++VL A + G L +G +H +R GL +I
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ ++IDMY KC ++ A + F ++ +KNV SWT++I G ++ + +AL F M+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 495 LKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++PN +T VS+L+AC+ G + G + +A R GV ++D+ R G ++ A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 554 WN--QFNSNERDVSAWNILLTGYAERGQGALAE 584
++ Q + D W+ LL LAE
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELAE 476
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 187/364 (51%), Gaps = 13/364 (3%)
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ K D SWN++I+ +G+ + L+ F MR++ + P + I A + D G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ H G+ D+ V + LI MY + G E+ KVF + +++VSWT+MI Y+ +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 378 VLPDKAVETYQMM------EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
AV ++ + + + D + + SV+SAC+ + L +H ++ G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 432 SYIIIANTLIDMYSKCK--CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + NTL+D Y+K + A ++F QI DK+ +S+ SI+ + S EA FR
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 490 KMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+++ N + N++TL ++L A + GAL GK IH +R+G+ D + +++DMY +C
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLF 604
GR++ A F+ ++V +W ++ GY G A A E F MIDS + N+ + +
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 605 RKCQ 608
C
Sbjct: 396 AACS 399
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 206/425 (48%), Gaps = 10/425 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + +L +G +AL SM++L++ + ++ C G H
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + +A + M+ G L A VF ++ R++ SW +I GY G +A+SL
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 184 YQRMFWVGGVKPDVYTFP-----CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
++ + D V+ C VP + +H VI+ G++ V V N L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 239 ITMYVKCGD--LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVD 295
+ Y K G+ + AR +FD + +DR+S+N+++S Y ++G + +F +++ +V
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
+ +TLS+V+ A G ++G+ +H VI+MG DDV V +I MY G E K
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F RM++K+V SWT MI+ Y KA+E + M G P+ IT SVL+AC+ G
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 416 DLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIIL 473
G + + + R G+ + ++D+ + + KA ++ ++ K + I W+S++
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 474 GLRLN 478
R++
Sbjct: 465 ACRIH 469
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 136/257 (52%), Gaps = 11/257 (4%)
Query: 349 REEGEKVFSR-MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
R+ +F+R ++ DV SW ++I+ S +A+ + M P + +
Sbjct: 25 RQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIK 84
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
AC+ L ++ G + HQ A G S I +++ LI MYS C ++ A +VF +IP +N++S
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPN-------SVTLVSILSACARIGALMCGKE 520
WTS+I G LN + +A+ F+ ++++ + S+ LVS++SAC+R+ A +
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGR--MKPAWNQFNS-NERDVSAWNILLTGYAER 577
IH+ ++ G + N LLD Y + G + A F+ ++D ++N +++ YA+
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 578 GQGALAEEFFRKMIDSK 594
G A E FR+++ +K
Sbjct: 265 GMSNEAFEVFRRLVKNK 281
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 255/519 (49%), Gaps = 16/519 (3%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++ L+ +D+ E D D+ ++++LC R EG +H + ++ +GN
Sbjct: 47 LQEFLRIIDARDE---PFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGND 103
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ FG+ G A +F + ++ S+ ++ Y AG DEAL + + + K
Sbjct: 104 LVFMYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILH-LARLKAFKA 162
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D + G DL G+ H + R GY+ D V +LI MY CG++ A F
Sbjct: 163 DPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAF 222
Query: 256 DGM----PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
D P D +SW +++ E+ +Y+ L LF MRE V PD + +V+ + +
Sbjct: 223 DRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGL 282
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
GD G+ +H V+ D V ++KMY G+ ++ + F R++ V +WT ++
Sbjct: 283 GDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLV 342
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA---MRT 428
Y + ++ + MEAEG P+E+T ++L C L L+ G K+ LA +
Sbjct: 343 GAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQR 401
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
L + I +I M+S+ + A E F +I K+V ++T++I G N + EAL F
Sbjct: 402 SLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIF 461
Query: 489 RKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
++M+ + +++ L +SACA I L GK +H A+ +G+ D + AL+DMY RC
Sbjct: 462 QEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRC 521
Query: 548 GRMKPAWNQFNSNER-DVSAWNILLTGYAERG--QGALA 583
G M+ A F ER D AW+ ++ G +GA+A
Sbjct: 522 GSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVA 560
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 35/496 (7%)
Query: 79 ALKYLDSMQELNICVDE-------DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
AL D M+E + D D+++ L + + KR +HS+V
Sbjct: 253 ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKR-------IHSMVLDRELERDSM 305
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + M+ + G + A F ++ + +W VL+G Y + G F+ + + +RM
Sbjct: 306 VGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERM-EAE 364
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHV---HVIRFGYEADVDVVNALITMYVKCGDL 248
GVKP+ TF +L TC + L+ GK++ + +A + A+I M+ + +
Sbjct: 365 GVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSM 423
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+ AR FD + ++ ++ AMI+GY N + + L +F M V D + L+ ISA
Sbjct: 424 ILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISAC 483
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D + G+ +H + +G D V L+ MY G+ E+ VF +E D V+W+
Sbjct: 484 ASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWS 543
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMR 427
MI+ P AV M+ +G P T+ VL+ACA G ++ K+H L +
Sbjct: 544 AMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVD 603
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLN--NRSFEA 484
G S + ++ MY+K I +A F +I + +V +WT+++ RL N S A
Sbjct: 604 GGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRA 663
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD-GFLPN---- 538
L R M + + P+ VT V IL+ACA G L A + FD G +P
Sbjct: 664 LKLARMMQQDGVMPDKVTFVDILTACAYGGHLQ-----EAGRYFKDMKFDYGLVPEMEHY 718
Query: 539 -ALLDMYVRCGRMKPA 553
AL+D R G ++ A
Sbjct: 719 VALVDTVARKGYLQEA 734
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 232/516 (44%), Gaps = 12/516 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ALK L + D L V KR G + H + + L +
Sbjct: 143 GDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVA 202
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR----DLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + M+ G++ A F + R D+ SW ++ + + AL L+ RM
Sbjct: 203 ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRM-R 261
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV PD F VL + G+ D+ +GK +H V+ E D V A++ MY + G +
Sbjct: 262 EQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQ 321
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A FD + + +W ++ Y G + + + M V P+ +T +++ +
Sbjct: 322 DACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCK 381
Query: 310 LVGDEKLGREVHGYVIKM---GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ E G+++ + + +I M+ F + + F ++ K V +
Sbjct: 382 NLALED-GKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAA 440
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+T MI+ Y + P +A+ +Q M D + +A +SACA + +L+ G LH AM
Sbjct: 441 YTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAM 500
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
GL ++ L+DMYS+C ++ A VF +I + ++W+++I L + A+
Sbjct: 501 DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVA 560
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGAL-MCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+M + +P+ T+V +L+ACA G + +++H+ + G D + A++ MY
Sbjct: 561 MAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMY 620
Query: 545 VRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQ 579
+ G ++ A N F+ E DV AW +L Y G+
Sbjct: 621 AKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGK 656
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 193/406 (47%), Gaps = 12/406 (2%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV ++ VL+ C + + G VH H+ R EA+ V N L+ MY G+ AR +F
Sbjct: 62 DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
DG+ + +S+ A++ Y G+ + L + + R D L+ + A+ + D
Sbjct: 122 DGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLS 181
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG----EKVFSRMESKDVVSWTTMI 371
LGR H + + G+ D V LI MY + G E ++ F R S DVVSWT ++
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ A++ + M +G +PD I +VL + LG++ G ++H + + L
Sbjct: 242 AACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELE 301
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL--IFFR 489
++ ++ MY++ I A F +I V +WT +++G SF ++ I R
Sbjct: 302 RDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWT-VLVGAYCRLGSFNSVMQILER 360
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA---LRIGVAFDGFLPNALLDMYVR 546
+KPN VT ++IL C + AL GK+I A A + + + A++ M+ R
Sbjct: 361 MEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSR 419
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
M A F+ +++ V+A+ ++ GYA Q A F++MI
Sbjct: 420 FSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMI 465
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 9/308 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +AL M + D L + C +EG LH H +
Sbjct: 451 NKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVV 510
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ + G + A VFG++ D +W+ +I + G A+++ RM G
Sbjct: 511 RTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARM-QQDG 569
Query: 193 VKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+P T VL C ++ ++VH ++ G+++D +V A++ MY K G + A
Sbjct: 570 WRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEA 629
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYM---KGLMLFIMMREVLVDPDFMTLSSVISAS 308
FD + D +W M+ Y G+Y + L L MM++ V PD +T +++A
Sbjct: 630 CNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTAC 689
Query: 309 ELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV--V 365
G ++ GR G ++ L+ G +E E + RM V +
Sbjct: 690 AYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLI-RMVPLQVNEI 748
Query: 366 SWTTMISC 373
W ++ C
Sbjct: 749 IWFALLEC 756
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 245/497 (49%), Gaps = 51/497 (10%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS V H + LG + + G+ G A VF + +R++ +NV+I Y
Sbjct: 54 VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+D+AL +++ M GG PD YT+PCVL+ C +L+ G ++H V + G + ++ V N
Sbjct: 114 YDDALLVFRDMV-SGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGN 172
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI +Y KCG L AR V D M +D +SWN+M++GY +N ++ L + M V P
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D T++S++ A E + +Y+ E++F
Sbjct: 233 DACTMASLLPAVTNTSSENV-------------------------LYV--------EEMF 259
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+E K +VSW MIS Y + +P K+V+ Y M PD IT ASVL AC L L
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALL 319
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
LG ++H+ R L +++ N+LIDMY++C C++ A VF ++ ++V SWTS+I
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYG 379
Query: 477 LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAF 532
+ + + A+ F +M + P+S+ V+ILSAC+ G L GK + +I
Sbjct: 380 MTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPII 439
Query: 533 DGFLPNALLDMYVRCGRMKPAWN-----QFNSNERDVSAWNILLTG---YAERGQGALAE 584
+ F L+D+ R GR+ A+N NER W LL+ Y+ G LA
Sbjct: 440 EHFA--CLVDLLGRSGRVDEAYNIIKQMPMKPNER---VWGALLSSCRVYSNMDIGILAA 494
Query: 585 EFFRKMIDSKGNWRKLM 601
+ ++ + + L+
Sbjct: 495 DKLLQLAPEESGYYVLL 511
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 185/385 (48%), Gaps = 35/385 (9%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
PD+K K VH V + + + L+ Y G+ AR VFD +P+R+ I +N MI
Sbjct: 46 PDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMI 105
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
Y N Y L++F M PD T V+ A + ++G ++HG V K+G
Sbjct: 106 RSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ V N LI +Y G E V M+SKDVVSW +M++ Y ++ D A++ + M
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
+ PD T+AS+L A + NT + +
Sbjct: 226 DGVRQKPDACTMASLLPA---------------------------VTNT------SSENV 252
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSAC 509
E+F + K+++SW +I N+ +++ + +M ++P+++T S+L AC
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWN 568
+ AL+ G+ IH + R + + L N+L+DMY RCG ++ A F+ + RDV++W
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
L++ Y GQG A F +M +S
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNS 397
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 37/409 (9%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C GL LH V K L++ +GN ++++ K G L A V +M +D
Sbjct: 139 VLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKD 198
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN ++ GYA+ FD+AL + + M V KPD T +L P + +
Sbjct: 199 VVSWNSMVAGYAQNMQFDDALDICREMDGVRQ-KPDACTMASLL------PAVTNTSSEN 251
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
V +YV+ +F + K+ +SWN MIS Y +N
Sbjct: 252 V-------------------LYVE--------EMFMNLEKKSLVSWNVMISVYMKNSMPG 284
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
K + L++ M + V+PD +T +SV+ A + LGR +H YV + ++ + N LI
Sbjct: 285 KSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI 344
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G E+ ++VF RM+ +DV SWT++IS Y + AV + M+ G PD I
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404
Query: 401 TIASVLSACACLGNLDLG-IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
++LSAC+ G L+ G Q+ + I L+D+ + +D+A + Q
Sbjct: 405 AFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQ 464
Query: 460 IPDK-NVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+P K N W +++ R+ + + + I +L L P +LS
Sbjct: 465 MPMKPNERVWGALLSSCRVYS-NMDIGILAADKLLQLAPEESGYYVLLS 512
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 227/438 (51%), Gaps = 11/438 (2%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWNV + A F E++SLY+ M G PD ++FP +L++C + G+++H H
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYM 280
VIR G EA+ V+ ALI+MY KCG + AR VF+ P + + +NA+ISGY N +
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
+F M+E V D +T+ ++ + LGR +HG +K G +V+V N I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY+ G+ E G ++F M K +++W +IS Y + L +E ++ M++ G PD
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+ SVLS+CA LG +G ++ +L G + ++N LI MY++C + KA VF +
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P K+++SWT++I ++ L F M+ ++P+ V +LSAC+ G G
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375
Query: 520 EIHAHALRIGVAFDGFLP---NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGY 574
E+ R G P + L+D+ R GR+ A +S E D + W LL
Sbjct: 376 ELFRAMKREYKLEPG--PEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGAC 433
Query: 575 AERGQGALAEEFFRKMID 592
+AE F K+I+
Sbjct: 434 KIHKNVDMAELAFAKVIE 451
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 216/460 (46%), Gaps = 14/460 (3%)
Query: 56 SSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGL 115
S++A+ + N RL EL +++ SM D + +++ C G
Sbjct: 11 SAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQ 70
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS--WNVLIGGYAK 173
LH V + + A +SM+ K G + A VF + +N LI GY
Sbjct: 71 QLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTA 130
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+A +++RM G V D T ++ C L G+ +H ++ G ++V
Sbjct: 131 NSKVSDAAFMFRRMKETG-VSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVA 189
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V+N+ ITMY+KCG + R +FD MP + I+WNA+ISGY +NG L LF M+
Sbjct: 190 VLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSG 249
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD TL SV+S+ +G +K+G+EV V GF+ +V + N LI MY GN +
Sbjct: 250 VCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKAR 309
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VF M K +VSWT MI CY + + + + M G PD VLSAC+ G
Sbjct: 310 AVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSG 369
Query: 414 NLDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
D G++L + + G Y + L+D+ + +D+A+E +P + +
Sbjct: 370 LTDKGLELFRAMKREYKLEPGPEHY----SCLVDLLGRAGRLDEAMEFIDSMPVEPDGAV 425
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W +++ +++ A + F K ++ +P ++ ++S
Sbjct: 426 WGALLGACKIHKNVDMAELAFAK-VIEFEPMNIGYYVLMS 464
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F R + SW + L +++ Y+ M GS PD + +L +CA L
Sbjct: 7 FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV--ISWTSIIL 473
G +LH +R G + + LI MY KC ++ A +VF + P + + + ++I
Sbjct: 67 VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G N++ +A FR+M + +SVT++ ++ C L G+ +H ++ G
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ + N+ + MY++CG ++ F+ + + WN +++GY++ G E F +M
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246
Query: 592 DS 593
S
Sbjct: 247 SS 248
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 221/401 (55%), Gaps = 17/401 (4%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P V++ CG DL GK++H V++ G+E DV V +L+ MY + G + AR +FD MP
Sbjct: 1 PPVVKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
RDR SWNAMISGY +NG + L + MR V D +T++SV+ VGD G+ +
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H YVIK G ++ V N LI MY FG+ +KVF + KDVVSW T+I+ Y + L
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLA 176
Query: 381 DKAVETYQMMEA-EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+A+E Y +ME E +P++ T S+L A + +G L G+++H ++ L S + +
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
LIDMY KC +D A+ +F+Q+P KN + W ++I ++ +AL FR+M +KP+
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296
Query: 499 SVTLVSILSACARIG----ALMCGKEI-HAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+T VS+LSAC+ G A C + + ++ + G ++D++ R G ++ A
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYG----CMVDLFGRAGELEMA 352
Query: 554 WNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+N + D SAW LL G L + ++ +
Sbjct: 353 FNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE 393
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 193/369 (52%), Gaps = 5/369 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H +V K V + + + M+ +FG +G A +F M RD SWN +I GY
Sbjct: 12 DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYC 71
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ G EAL + M + GVK D T VL C V D+ GK +H++VI+ G E ++
Sbjct: 72 QNGNAAEALDIADEMR-LEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE- 291
V NALI MY K G L A+ VF G+ +D +SWN +I+GY +NG + + ++++M E
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ T S++ A VG + G +HG VIK DV V LI MY G ++
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDD 249
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F ++ K+ V W MISCY +KA+E ++ M+AE PD IT S+LSAC+
Sbjct: 250 AISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSH 309
Query: 412 LGNL-DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWT 469
G + D + + G+ + ++D++ + ++ A ++P + +W
Sbjct: 310 SGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWG 369
Query: 470 SIILGLRLN 478
+++ R++
Sbjct: 370 ALLNACRIH 378
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 4/255 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C NG+ +AL D M+ + +D + +++ +C G +H V K
Sbjct: 64 NAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIK 123
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + NA ++M+ KFG LGHA VFG + +D+ SWN LI GYA+ G EA+ +
Sbjct: 124 HGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEV 182
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y M + P+ T+ +L V L++G +H VI+ +DV V LI MY
Sbjct: 183 YLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYG 242
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L A +F +P+++ + WNAMIS Y +G+ K L LF M+ V PD +T S
Sbjct: 243 KCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVS 302
Query: 304 VISA---SELVGDEK 315
++SA S LV D +
Sbjct: 303 LLSACSHSGLVSDAQ 317
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 34/198 (17%)
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
V+ AC G+L G K+H L ++ G + +A +L+ MYS+ + A ++F +P ++
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHA 523
SW ++I G N + EAL +M L +K +++T+ S+L CA++G ++ GK IH
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALA 583
+ ++ G+ F+ F+ NAL++M YA+ G A
Sbjct: 120 YVIKHGLEFELFVSNALINM------------------------------YAKFGSLGHA 149
Query: 584 EEFFRKMIDSKGNWRKLM 601
++ F +I +W L+
Sbjct: 150 QKVFGLLIKDVVSWNTLI 167
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 263/512 (51%), Gaps = 33/512 (6%)
Query: 93 VDEDALVNLVRLCEWKRGYD------EGL-YLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
+DE + N ++ C RGY G +H V+ T+ + N+ ++M+ K G
Sbjct: 64 IDEFTVANALKAC---RGYPLLGSQIHGFSIIHEFVNVTI------VSNSLMNMYCKSGQ 114
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
A +F + D+ SWN ++ G + ++A S +M GV D T+ VL
Sbjct: 115 FCKALCIFENLTHPDIVSWNTVLSGCQTS---EDAFSFACKMN-SSGVVFDAVTYTTVLS 170
Query: 206 TCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
C + G ++H +++FG++ +V V NALI+MY + G LV AR VF+ M RD
Sbjct: 171 FCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDL 230
Query: 264 ISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
+SWNAMISGY + G Y ++ + +F+ M ++ D ++ +S +SA + +L R++HG
Sbjct: 231 VSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHG 290
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
IK V+V N LI Y E+ VF M ++VVSWTTMIS E +
Sbjct: 291 LSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEA-----E 345
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDL-GIKLHQLAMRTGLISYIIIANTLI 441
AV + M +G P+++T ++ A +G L + G +H +TG S + N++I
Sbjct: 346 AVSFFNEMRLDGVYPNDVTFVGLIHAIT-IGELVVQGKMVHGFCTKTGFSSKSNVCNSII 404
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVT 501
MY+K K + +++VF ++ +++I+W ++I G N EA+ F ++ KPN +
Sbjct: 405 TMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYS 464
Query: 502 LVSILSA--CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-N 558
SIL+A A +L G+ H+ +++G+ D + +ALLDMY + G + + F
Sbjct: 465 FGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVE 524
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ ++ AW +++ YA G +F +M
Sbjct: 525 TPQQSQFAWTTIISAYARHGDYESVMNWFEEM 556
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 255/488 (52%), Gaps = 22/488 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKR---GYDEGLYLHSVVSKTMSHLSVRLG 133
E A + M + D ++ C W+ + GL LHS + K V +G
Sbjct: 144 EDAFSFACKMNSSGVVFDAVTYTTVLSFC-WRHVEAYFLIGLQLHSCIVKFGFDCEVFVG 202
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGG 192
NA +SM+ ++G L A VF +M RDL SWN +I GY++ G + EA+S++ +MF GG
Sbjct: 203 NALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFR-GG 261
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
++ D +F + CG +L+ +++H I+ +E V V N LI+ Y KC + AR
Sbjct: 262 MELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDAR 321
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD---FMTLSSVISASE 309
LVF M +R+ +SW MIS + + + F MR V P+ F+ L I+ E
Sbjct: 322 LVFQNMNERNVVSWTTMISI-----DEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGE 376
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
LV G+ VHG+ K GFS +VCN +I MY F + ++ KVF ++ +D+++W
Sbjct: 377 LVVQ---GKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNA 433
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMR 427
+IS + + L +A+ + E S P++ + S+L+A ++ L G + H ++
Sbjct: 434 LISGFVHNGLCQEAIRAFFSGLIE-SKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIK 492
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
GL + I+++ L+DMY+K I ++ +VF + P ++ +WT+II + + +
Sbjct: 493 LGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNW 552
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYV 545
F +M L ++P+S+T +SIL+AC R G + G + ++ + + L+DM
Sbjct: 553 FEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLG 612
Query: 546 RCGRMKPA 553
R GR++ A
Sbjct: 613 RAGRLEEA 620
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 178/385 (46%), Gaps = 10/385 (2%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
+D + + V C +++ + +H + KT V + N +S + K + A V
Sbjct: 264 LDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLV 323
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F M +R++ SW +I EA+S + M + GV P+ TF ++
Sbjct: 324 FQNMNERNVVSWTTMISIDEA-----EAVSFFNEM-RLDGVYPNDVTFVGLIHAITIGEL 377
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
+ +GK VH + G+ + +V N++ITMY K + + VF + +D I+WNA+ISG
Sbjct: 378 VVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISG 437
Query: 273 YFENGEYMKGLMLFI--MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
+ NG + + F ++ F ++ + I A+E V K G+ H +IK+G +
Sbjct: 438 FVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAIGAAEDV-SLKYGQRCHSQIIKLGLN 496
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
D V + L+ MY G+ E +KVF + +WTT+IS Y + + ++ M
Sbjct: 497 TDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEM 556
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS-YIIIANTLIDMYSKCKC 449
PD IT S+L+AC G +D+G L ++ I + L+DM +
Sbjct: 557 RRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGR 616
Query: 450 IDKALEVFHQIPDKNVISWTSIILG 474
+++A + IP +S +LG
Sbjct: 617 LEEAERLMSHIPGGPGLSVLQSLLG 641
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 46/369 (12%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ + + M+ + ++ V L+ +G +H +KT + N+ +
Sbjct: 345 EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSII 404
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV--KP 195
+M+ KF + + VF ++ +D+ +WN LI G+ G EA+ R F+ G + KP
Sbjct: 405 TMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAI----RAFFSGLIESKP 460
Query: 196 DVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ Y+F +L G D LK G+ H +I+ G D V +AL+ MY K G + ++
Sbjct: 461 NQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQK 520
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF P++ + +W +IS Y +G+Y + F MR + V PD +T S+++A G
Sbjct: 521 VFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGM 580
Query: 314 EKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+G + G ++K + L+ M G EE E++ S +
Sbjct: 581 VDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGG---------- 630
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---TG 429
P + S+L AC GN+D+G ++ M T
Sbjct: 631 ------------------------PGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTE 666
Query: 430 LISYIIIAN 438
SY++++N
Sbjct: 667 SGSYVLMSN 675
>gi|125590818|gb|EAZ31168.1| hypothetical protein OsJ_15267 [Oryza sativa Japonica Group]
Length = 586
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 201/366 (54%), Gaps = 13/366 (3%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWV----GGVKPDVYTFPCVLRTC---GGVPDLKRG 216
+N LI AG A + + G +PD YT P L+ C GG L+ G
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGG--GLREG 137
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ H + G+ V V NAL+T Y CG AR VFD M +RD +SW A++S +
Sbjct: 138 CQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRG 197
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G +M+ L + + E+ V P+ +TL+SV+ A +G + G+ VHG+ + ++ V
Sbjct: 198 GMFMEALGV---LAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVG 254
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N L+ MY+ + +VF + ++D+VSWT MIS P +A+E + M+ G
Sbjct: 255 NALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVK 314
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD++ +++VLSACA LG L+ G +H+ R G+ + + +++DMY KC C+D A+ +
Sbjct: 315 PDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSI 374
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F ++P KNV SW ++I G L+ R EAL F +M+ + L PN VT +++L AC G +
Sbjct: 375 FQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLV 434
Query: 516 MCGKEI 521
G+++
Sbjct: 435 QEGRQL 440
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 177/336 (52%), Gaps = 11/336 (3%)
Query: 266 WNAMISGYFENGEYMKGLMLFIMM-----REVLVDPDFMTLSSVISA-SELVGDEKLGRE 319
+NA+IS G+ F ++ PD TL + + A + L G + G +
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
H K GF V V N L+ Y + G + KVF M +DVVSWT ++S + +
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+A+ M+ P+E+T+ASVL AC LG G +H R +I+ N
Sbjct: 200 FMEALGVLAEMDV---TPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNA 256
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
L+DMY KC+ +D A VF + ++++SWT +I GL R EAL F M ++ +KP+
Sbjct: 257 LLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPD 316
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
V L ++LSACA +GAL G+ +H + R G+ +D + +++DMYV+CG + A + F
Sbjct: 317 KVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQ 376
Query: 559 SNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
++VS+WN L+ G+A G+G A + F +M+ S
Sbjct: 377 EMPLKNVSSWNALINGFALHGRGREALDCFDRMVAS 412
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 176/357 (49%), Gaps = 5/357 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
G EG H+V K V + NA ++ + G G A VF +M +RD+ SW L+
Sbjct: 133 GLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLS 192
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
+ + G F EAL + M V P+ T VL CG + + GK VH R E
Sbjct: 193 AFTRGGMFMEALGVLAEM----DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKE 248
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
++ V NAL+ MYVKC L AR VFD + RD +SW MISG + + L +F M
Sbjct: 249 LNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAM 308
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ V PD + LS+V+SA +G + GR VH Y+ + G DV V ++ MY+ G
Sbjct: 309 QISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCL 368
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ +F M K+V SW +I+ + +A++ + M A G P+E+T +VL AC
Sbjct: 369 DTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGAC 428
Query: 410 ACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
G + G +L +L ++ L + ++D+ + I +A +V +P + V
Sbjct: 429 CHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPV 485
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 1/241 (0%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
++ L + E+++ +E L +++ C G +H + L++ +GNA L M
Sbjct: 201 MEALGVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDM 260
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+VK L A VF + RD+ SW V+I G + EAL ++ M + GVKPD
Sbjct: 261 YVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAM-QISGVKPDKVV 319
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
VL C + L+ G+ VH ++ R G E DV V +++ MYVKCG L A +F MP
Sbjct: 320 LSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMP 379
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
++ SWNA+I+G+ +G + L F M + P+ +T +V+ A G + GR+
Sbjct: 380 LKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQ 439
Query: 320 V 320
+
Sbjct: 440 L 440
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL+ ++MQ + D+ L ++ C + G ++H + + V +G + +
Sbjct: 300 EALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVV 359
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+VK G L A +F +M +++ SWN LI G+A G EAL + RM G+ P+
Sbjct: 360 DMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMV-ASGLHPNE 418
Query: 198 YTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF VL C ++ G+++ + + D ++ + + G + A V
Sbjct: 419 VTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIK 478
Query: 257 GMPKR 261
MP R
Sbjct: 479 AMPMR 483
>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
Length = 948
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 255/520 (49%), Gaps = 16/520 (3%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
L++ L+ +D+ E D D+ ++++LC R EG +H + ++ +GN
Sbjct: 46 ELQEFLRIIDARDE---PFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGN 102
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ M+ FG+ G A +F + ++ S+ ++ Y AG DEAL + + + K
Sbjct: 103 DLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILH-LARLKAFK 161
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D + G DL G+ H + R GY+ D V +LI MY CG++ A
Sbjct: 162 ADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQA 221
Query: 255 FDGM----PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
FD P D +SW +++ E+ +Y+ L LF MRE V PD + +V+ +
Sbjct: 222 FDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIG 281
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+GD G+ +H V+ D + ++KMY G+ ++ + F R++ V +WT +
Sbjct: 282 LGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVL 341
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA---MR 427
I Y + ++ + MEAEG P+E+T ++L C L L+ G K+ LA +
Sbjct: 342 IGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQ 400
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
L + I +I M+S+ + A E F +I K+V ++T++I G N + EAL
Sbjct: 401 RSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAI 460
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M+ + +++ L +SACA I L GK +H A+ +G+ D + AL+DMY R
Sbjct: 461 FQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSR 520
Query: 547 CGRMKPAWNQFNSNER-DVSAWNILLTGYAERG--QGALA 583
CG M+ A F ER D AW+ ++ G +GA+A
Sbjct: 521 CGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVA 560
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 35/496 (7%)
Query: 79 ALKYLDSMQELNICVDE-------DALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
AL D M+E + D D+++ L + + KR +HS+V
Sbjct: 253 ALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKR-------IHSMVLDRELERDSM 305
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G A + M+ + G + A F ++ + +W VLIG Y + G F+ + + +RM
Sbjct: 306 IGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERM-EAE 364
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHV---HVIRFGYEADVDVVNALITMYVKCGDL 248
GVKP+ TF +L TC + L+ GK++ + +A + A+I M+ + +
Sbjct: 365 GVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSM 423
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+ AR FD + ++ ++ AMI+GY N + + L +F M V D + L+ ISA
Sbjct: 424 ILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISAC 483
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ D + G+ +H + +G D V L+ MY G+ E+ VF +E D ++W+
Sbjct: 484 ASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWS 543
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI-KLHQLAMR 427
MI+ P AV M+ +G P T+ VL+ACA G ++ K+H L +
Sbjct: 544 AMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVD 603
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLN--NRSFEA 484
G S + ++ MY+K I +A F +I + +V +WT+++ RL N S A
Sbjct: 604 GGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRA 663
Query: 485 LIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD-GFLPN---- 538
L R M + + P+ VT V IL+ACA G L A + FD G +P
Sbjct: 664 LKLARMMQQDGVMPDKVTFVDILTACAYGGHLQ-----EAGRYFKDMKFDYGLVPEMEHY 718
Query: 539 -ALLDMYVRCGRMKPA 553
AL+D R G ++ A
Sbjct: 719 VALVDTVARKGYLQEA 734
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 231/516 (44%), Gaps = 12/516 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ALK L + D L V KR G + H + + L +
Sbjct: 143 GDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVA 202
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDR----DLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + M+ G++ A F + R D+ SW ++ + + AL L+ RM
Sbjct: 203 ISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRM-R 261
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
GV PD F VL + G+ D+ +GK +H V+ E D + A++ MY + G +
Sbjct: 262 EQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQ 321
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A FD + + +W +I Y G + + + M V P+ +T +++ +
Sbjct: 322 DACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCK 381
Query: 310 LVGDEKLGREVHGYVIKM---GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ E G+++ + + +I M+ F + + F ++ K V +
Sbjct: 382 NLALED-GKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAA 440
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+T MI+ Y + P +A+ +Q M D + +A +SACA + +L+ G LH AM
Sbjct: 441 YTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAM 500
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
GL ++ L+DMYS+C ++ A VF +I + I+W+++I L + A+
Sbjct: 501 DLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVA 560
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGAL-MCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+M + +P T+V +L+ACA G + +++H+ + G D + A++ MY
Sbjct: 561 MAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMY 620
Query: 545 VRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQ 579
+ G ++ A N F+ E DV AW +L Y G+
Sbjct: 621 AKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGK 656
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 193/406 (47%), Gaps = 12/406 (2%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV ++ VL+ C + + G VH H+ R EA+ V N L+ MY G+ AR +F
Sbjct: 62 DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
DG+ + +S+ A++ Y G+ + L + + R D L+ + A+ + D
Sbjct: 122 DGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLS 181
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG----EKVFSRMESKDVVSWTTMI 371
LGR H + + G+ D V LI MY + G E ++ F R S DVVSWT ++
Sbjct: 182 LGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKIL 241
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ A++ + M +G +PD I +VL + LG++ G ++H + + L
Sbjct: 242 AACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELE 301
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL--IFFR 489
+I ++ MY++ I A F +I V +WT +++G SF ++ I R
Sbjct: 302 RDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWT-VLIGAYCRLGSFNSVMQILER 360
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA---LRIGVAFDGFLPNALLDMYVR 546
+KPN VT ++IL C + AL GK+I A A + + + A++ M+ R
Sbjct: 361 MEAEGVKPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSR 419
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
M A F+ +++ V+A+ ++ GYA Q A F++MI
Sbjct: 420 FSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMI 465
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 9/308 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N +AL M + D L + C +EG LH H +
Sbjct: 451 NKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVV 510
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ + G + A VFG++ D +W+ +I + G A+++ RM G
Sbjct: 511 RTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARM-QQDG 569
Query: 193 VKPDVYTFPCVLRTCGGVPDLKR-GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+P T VL C ++ ++VH ++ G+++D +V A++ MY K G + A
Sbjct: 570 WRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEA 629
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYM---KGLMLFIMMREVLVDPDFMTLSSVISAS 308
FD + D +W M+ Y G+Y + L L MM++ V PD +T +++A
Sbjct: 630 CNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTAC 689
Query: 309 ELVGD-EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV--V 365
G ++ GR G ++ L+ G +E E + RM V +
Sbjct: 690 AYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEAEDLI-RMVPLQVNEI 748
Query: 366 SWTTMISC 373
W ++ C
Sbjct: 749 IWFALLEC 756
>gi|302768433|ref|XP_002967636.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
gi|300164374|gb|EFJ30983.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
Length = 747
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 249/526 (47%), Gaps = 6/526 (1%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHL 128
L NG ++AL M + A + ++ C R EG +H+ V+ +
Sbjct: 88 LAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEGRKVHARVLEDAVLAS 147
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V L A ++M+ K G L A VFG + +D FSW +I Y + FD AL +Y F
Sbjct: 148 DVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALEIYME-F 206
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
V G KPD TF +LR C + + L +G+ VH ++ G +++ +VN L+ +Y G
Sbjct: 207 LVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYLYGSSG 266
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
A + D M + + WNAM++ + G+ + L LF V P +T S I
Sbjct: 267 CFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGVKPSGVTFVSGID 326
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A GDE+ GR +H ++ GF D V LI MY GN E+ ++ ++VS
Sbjct: 327 ACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQARRMLEASGWNNLVS 386
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
T++I Y L + A++ + +E G +++T+ SV++A LD G +H +
Sbjct: 387 CTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARLI 446
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
G S +I+ N LI MY KC + A +F KN +SW SII AL
Sbjct: 447 ELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSIIGACSQQGDGKSALD 506
Query: 487 FFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F +M L+ P ++TL ++L AC RI L GK IH + D + ++LL+MY
Sbjct: 507 LFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSSLLNMYT 566
Query: 546 RCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+CG + A F + V W ++ YA+ + + + R+M
Sbjct: 567 KCGSLVDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRM 612
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 243/486 (50%), Gaps = 12/486 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG ++HS + S +GN L M+ + G + A F K+ +++ SW + I A
Sbjct: 30 EGKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEKVFEKNHISWTLFIAALA 89
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-D 231
+ G EAL+ +++M + GVKP F V+ C D G++VH V+ A D
Sbjct: 90 QNGHCKEALATFKKMD-LEGVKPKRLAFLRVIGACCDARDATEGRKVHARVLEDAVLASD 148
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V + ALI MY KCG L +A +VF + +D SW +MI Y E+ E+ L +++ E
Sbjct: 149 VFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALEIYM---E 205
Query: 292 VLVD---PDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
LV+ PD T +++ A + ++ L GR VH +++ G ++++ N L+ +Y S
Sbjct: 206 FLVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYLYGSS 265
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G EE + RM + V W M++ +A+E + EG P +T S +
Sbjct: 266 GCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGVKPSGVTFVSGI 325
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
AC+ G+ G +H A+ G S ++ LI+MY KC +++A + N++
Sbjct: 326 DACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQARRMLEASGWNNLV 385
Query: 467 SWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
S TS+I + AL +F R +K N VTLVS+++A L G+ +HA
Sbjct: 386 SCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARL 445
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAE 584
+ +G + D + NAL+ MY +CG + A F N+ ++ +WN ++ +++G G A
Sbjct: 446 IELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSIIGACSQQGDGKSAL 505
Query: 585 EFFRKM 590
+ F +M
Sbjct: 506 DLFARM 511
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 12/378 (3%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F L+ C ++ GK +H ++ G + V N ++ MY + G + A+ F+ +
Sbjct: 17 AFASALKNC---TEVSEGKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEKV 73
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+++ ISW I+ +NG + L F M V P + VI A D GR
Sbjct: 74 FEKNHISWTLFIAALAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEGR 133
Query: 319 EVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
+VH V++ + DV + LI MY G ++ E VF + SKD SWT+MI Y
Sbjct: 134 KVHARVLEDAVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEH 193
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACL--GNLDLGIKLHQLAMRTGLISYII 435
D A+E Y EG PD T ++L AC L +L G +H + +GL S +
Sbjct: 194 EEFDLALEIYMEFLVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLA 253
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLN 494
+ N L+ +Y C ++A+++ ++ + W +++ L ++ +AL +F R +
Sbjct: 254 LVNRLVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEG 313
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP+ VT VS + AC+ G G+ IHA AL G D + L++MY +CG ++ A
Sbjct: 314 VKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQAR 373
Query: 555 NQFNSNERDVSAWNILLT 572
+ S WN L++
Sbjct: 374 RML-----EASGWNNLVS 386
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 188/375 (50%), Gaps = 7/375 (1%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++M+ K G+L A + +L S LI Y + G + AL ++ R+ GG+K
Sbjct: 359 LINMYGKCGNLEQARRMLEASGWNNLVSCTSLIWAYCQHGLLENALDVFHRVEQ-GGIKA 417
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ T V+ L RG+ +H +I G+ +DV V NALI MY KCG L A+++F
Sbjct: 418 NKVTLVSVVAAFWSSDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIF 477
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+++ +SWN++I + G+ L LF M P +TL++V+ A + D
Sbjct: 478 ANARRKNAVSWNSIIGACSQQGDGKSALDLFARMDLSGSSPTTITLANVLEACVRINDLP 537
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +H + D +V + L+ MY G+ + EK+F R +S VV+WT+MI+ Y
Sbjct: 538 RGKVIHLEIRGSMLEHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQSSCVVTWTSMIAAYA 597
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLISYI 434
+ +++ + ME EG +E+T +V+ AC+ G ++ G + G+ +
Sbjct: 598 KHARFEDSLKLGRRMEMEGVKFNEVTFLTVIFACSHAGFVEQGCHYFVSMTRERGMTPSL 657
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQ---IPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ ++D+ ++ I++AL+ + +P N +W +++ ++++ + + +
Sbjct: 658 EQYSCVVDLLARAGWIEQALDFIERRMHLP-PNAATWIALLNACKIHH-DLQRAVMVAER 715
Query: 492 MLNLKPNSVTLVSIL 506
++ L P + + S+L
Sbjct: 716 IIELSPGNSSACSLL 730
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 228/441 (51%), Gaps = 11/441 (2%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WNV + A F E++SLY+ M G PD ++FP +L++C + G+++H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS--WNAMISGYFENGEYMK 281
+ G E + V+ ALI+MY KCG + AR VF+ P+ ++S +NA+ISGY N +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+F M+E V D +T+ ++ + LGR +HG +K G +V+V N I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G+ E G ++F M K +++W +IS Y + L +E Y+ M++ G PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ SVLS+CA LG +G ++ +L G + + ++N I MY++C + KA VF +P
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE 520
K+++SWT++I ++ L+ F M+ ++P+ V +LSAC+ G G E
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 521 IHAHALRIGVAFDGFLP---NALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYA 575
+ R G P + L+D+ R GR+ A S E D + W LL
Sbjct: 380 LFRAMKREYKLEPG--PEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 576 ERGQGALAEEFFRKMIDSKGN 596
+AE F K+I+ + N
Sbjct: 438 IHKNVDMAELAFAKVIEFEPN 458
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 216/461 (46%), Gaps = 14/461 (3%)
Query: 55 TSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEG 114
+++A+ N RL EL +++ SM D + +++ C G
Sbjct: 13 VAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSG 72
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS--WNVLIGGYA 172
LH V+K + A +SM+ K G + A VF + S +N LI GY
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+A +++RM G V D T ++ C L G+ +H ++ G +++V
Sbjct: 133 ANSKVTDAAYMFRRMKETG-VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+N+ ITMY+KCG + R +FD MP + I+WNA+ISGY +NG L L+ M+
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V PD TL SV+S+ +G +K+G EV V GF +V V N I MY GN +
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF M K +VSWT MI CY + + + + M G PD VLSAC+
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 413 GNLDLGIKL-----HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
G D G++L + + G Y + L+D+ + +D+A+E +P + +
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHY----SCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
W +++ +++ A + F K ++ +PN++ ++S
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAK-VIEFEPNNIGYYVLMS 467
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 217/397 (54%), Gaps = 5/397 (1%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP 259
+ +++ C G+ + ++ H ++ G+ + N LI Y+KCG +V AR VFD +P
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVP 137
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
R ++WN+MI+ Y NG + + ++ M + PD T SSV A +G G+
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197
Query: 320 VHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
HG + +G +V V + L+ MY FG + V ++ KDVV +T +I Y
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
++++ ++ M +G +E T++SVL C L +L G +H L ++ GL S +
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
+L+ MY +C +D +L+VF Q + N ++WTS+I+GL N R AL+ FR+M+ ++ P
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
NS TL S+L AC+ + L GK+IHA ++ G+ D ++ AL+D Y +CG + A + F
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
N E DV + N ++ YA+ G G A + F M D+
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 474
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 267/563 (47%), Gaps = 44/563 (7%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHS 119
N ++ +LC+ +++ Y +Q+ C+ ++ ++ ++ KRG+ HS
Sbjct: 60 QSNIKIRKLCITETIQSTKLYSSLIQQ---CIGIKSITDITKIQSHALKRGFH-----HS 111
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
LGN + ++K G + +A VF ++ R + +WN +I Y + G E
Sbjct: 112 ------------LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKE 159
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNAL 238
A+ +YQRM G+ PD +TF V + + + G+ H + G ++V V +AL
Sbjct: 160 AIDIYQRMV-PDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSAL 218
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ MY K G + ARLV D + +D + + A+I GY +GE + L +F M + ++ +
Sbjct: 219 VDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANE 278
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
TLSSV+ + D GR +HG ++K G V+ L+ MY G ++ KVF +
Sbjct: 279 YTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQ 338
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ + V+WT++I + + A+ ++ M P+ T++SVL AC+ L L+ G
Sbjct: 339 FINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQG 398
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H + M+ GL + LID Y KC + A VF+ + + +V+S S+I N
Sbjct: 399 KQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQN 458
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG-VAFDGFL 536
EAL F M L+PN+VT + +LSAC G L G I + A G +
Sbjct: 459 GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDH 518
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID--- 592
++D+ R GR+K A N N DV W LL+ G +A+ ++ID
Sbjct: 519 YACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAP 578
Query: 593 --------------SKGNWRKLM 601
S GNW K++
Sbjct: 579 EDGGTHVLLSNLYASTGNWSKVI 601
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/608 (27%), Positives = 298/608 (49%), Gaps = 37/608 (6%)
Query: 26 PETSFYFKPKTRHFSSKNAQ-------SVQVLNTQNTSSIATKNPN-------SRLNELC 71
P + FKPK R +++ AQ +V N ++ K+P S L
Sbjct: 10 PPSLENFKPKFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFS 69
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVR----LCEWKRGYDE--GLYLHSVVSKTM 125
+G ++A + ++ L + +D ++++ LC DE G LH K
Sbjct: 70 RDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLC------DELFGRQLHCQCIKFG 123
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
V +G + + ++K + VF +M +R++ +W LI GYA+ DE L+L+
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM G +P+ +TF L RG +VH V++ G + + V N+LI +Y+KC
Sbjct: 184 RM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G++ +AR++FD + ++WN+MISGY NG ++ L +F MR V + +SVI
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDV 364
+ + + ++H V+K GF D ++ L+ Y + ++F + +V
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSWT MIS + + ++AV+ + M+ +G P+E T + +L+A + + +H
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQ 418
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
++T + L+D Y K +++A +VF I DK++++W++++ G + A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 485 LIFFRKMML-NLKPNSVTLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNALLD 542
+ F ++ +KPN T SIL+ CA A M GK+ H A++ + + +ALL
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRK 599
MY + G ++ A F E+D+ +WN +++GYA+ GQ A + F++M K +
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 600 LMGLFRKC 607
+G+F C
Sbjct: 599 FIGVFAAC 606
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 242/444 (54%), Gaps = 9/444 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H+VV K ++ + N+ +++++K G++ A +F K + + +WN +I GYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EAL ++ M + V+ +F V++ C + +L+ +++H V+++G+ D +
Sbjct: 273 NGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 234 VVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ AL+ Y KC ++ A +F + + +SW AMISG+ +N + + LF M+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V P+ T S +++A ++ EVH V+K + +V L+ Y+ G EE
Sbjct: 392 GVRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
KVFS ++ KD+V+W+ M++ Y + + A++ + + G P+E T +S+L+ CA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 413 -GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
++ G + H A+++ L S + +++ L+ MY+K I+ A EVF + +K+++SW S+
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IG 529
I G + ++ +AL F++M +K + VT + + +AC G + G++ +R
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA 553
+A + ++D+Y R G+++ A
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKA 651
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 216/448 (48%), Gaps = 10/448 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG +AL SM+ + + E + ++++LC + LH V K
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALS 182
+ A + + K + A +F ++ C ++ SW +I G+ + +EA+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M GV+P+ +T+ +L +P + EVH V++ YE V AL+ Y
Sbjct: 384 LFSEM-KRKGVRPNEFTYSVILT---ALPVISPS-EVHAQVVKTNYERSSTVGTALLDAY 438
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
VK G + A VF G+ +D ++W+AM++GY + GE + +F + + + P+ T S
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 303 SVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S+++ G++ HG+ IK + V + L+ MY GN E E+VF R
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD+VSW +MIS Y KA++ ++ M+ D +T V +AC G ++ G K
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 422 HQLAMRTGLISYIIIANT-LIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNN 479
+ +R I+ N+ ++D+YS+ ++KA++V +P+ W +I+ R++
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILS 507
++ + K ++ +KP +LS
Sbjct: 679 KTELGRLAAEK-IIAMKPEDSAAYVLLS 705
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 183/654 (27%), Positives = 304/654 (46%), Gaps = 95/654 (14%)
Query: 21 PKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQAL 80
PKT++ T Y P + + K+ T NT+ + +++ LC N L++A+
Sbjct: 40 PKTQLLTTHSYSNPPILNHTPKH----NFFPTTNTTL------HHQISFLCKNLKLQEAI 89
Query: 81 KYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR--LGNAFLS 138
L + + + + D L++ C + R GL +H+ + K S S + + +
Sbjct: 90 STLSQLPQ-HTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVI 148
Query: 139 MFVKFGDLGHAWYVFGKMC-DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K A + F + +++LFS+ ++G A+ G + EAL Y M G PD
Sbjct: 149 LYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMM-EKGFCPDN 207
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD--VDVVNALITMYVKCGDLVRARLVF 255
+ P L+ CGG+ + G+ +H V++ G E D V V +L+ MY KCG L A VF
Sbjct: 208 FVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVF 267
Query: 256 DGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASELVG 312
D MP R R + WN+MI GY +NG ++ + LF MR E V+P ++LS SA +
Sbjct: 268 DEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLE 327
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-KDVVSWTTMI 371
+ G++ H VI MGF + + + ++ Y G EE E VF M KD V+W MI
Sbjct: 328 AVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMI 387
Query: 372 SCYEGSVLPDKAVET-YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
S Y + +KA+E + M E E D +T++S+L+ A ++ LG KLH +R
Sbjct: 388 SSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEF 447
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK--------------------------- 463
S + + + ++DMY+KC +D A VFH K
Sbjct: 448 YSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFF 507
Query: 464 ---------NVISWTSIILGLRLNNRSFEALIFFRKMMLN-------------------- 494
NV+SW S+I G N + EA F +M L+
Sbjct: 508 QMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNG 567
Query: 495 ----------------LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
++PNS+++ S LSAC + L G+ IH + +R ++F +
Sbjct: 568 LGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITT 627
Query: 539 ALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+++DMY +CG + A F + +++ +N +++ YA G+ A A F++++
Sbjct: 628 SIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELV 681
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 217/466 (46%), Gaps = 43/466 (9%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQ-ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS + NG +A+ + M+ E + E +L C +EG H++V
Sbjct: 281 NSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVI 340
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEAL 181
L+ LG++ ++ + K G + VF M +D +WN++I Y + G F++AL
Sbjct: 341 LMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKAL 400
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ M ++ D T +L D+K GK++H IR + +D+ V++ ++ M
Sbjct: 401 EMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDM 460
Query: 242 YVKCGDLVRARLVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMT 300
Y KCG + AR VF K+D + WN M++ E G + L LF M+ V P+ ++
Sbjct: 461 YAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVS 520
Query: 301 LSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
+S+I GF + G E + +FS M+
Sbjct: 521 WNSLI---------------------FGFFRN--------------GQVVEAQDMFSEMQ 545
Query: 361 ----SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++++WTTMIS + L +A +Q M+ G P+ I+I S LSAC + L+
Sbjct: 546 LSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLN 605
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G +H MR + + I ++IDMY+KC +D A VF K + + ++I
Sbjct: 606 YGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYA 665
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+ +S EAL F++++ + P+ +T S+LSAC+ L G E+
Sbjct: 666 SHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLEL 711
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 197/455 (43%), Gaps = 59/455 (12%)
Query: 74 GSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
G E+AL+ M +E N+ D L +L+ L R G LH + + + +
Sbjct: 394 GMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAV 453
Query: 133 GNAFLSMFVKFGDLGHAWYVF---GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ L M+ K G + A VF GK +D+ WN ++ A+ G EAL L+ +M
Sbjct: 454 LSGVLDMYAKCGIMDCARGVFHFAGK--KKDIVLWNTMLAACAEKGLSGEALKLFFQM-Q 510
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ V P+V ++ N+LI + + G +V
Sbjct: 511 MESVPPNVVSW-----------------------------------NSLIFGFFRNGQVV 535
Query: 250 RARLVFDGMP----KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
A+ +F M + I+W MISG +NG + +F M+ + P+ ++++S +
Sbjct: 536 EAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSAL 595
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA + GR +HGYV++ S + + +I MY GN ++ + VF +K++
Sbjct: 596 SACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELP 655
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH--- 422
+ MIS Y +A+ +Q + +G MPD IT SVLSAC+ L G++L
Sbjct: 656 VYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYM 715
Query: 423 --QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+L M+ Y L+ + + +D+AL + +P +L N
Sbjct: 716 VCELQMKPSEKHY----GCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNH 771
Query: 481 SFEALIFFRKMMLNLKPNS----VTLVSILSACAR 511
E + K +L ++PN+ V L ++ +A +
Sbjct: 772 ETELANYIAKWLLKVEPNNPGNYVALSNVYAALGK 806
>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 282/602 (46%), Gaps = 76/602 (12%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
R++ LC NG + +AL + M NI + + +++ C ++R G +H+ + K
Sbjct: 18 RVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKG 77
Query: 126 SHLSVR--LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + + K L A +F K+ R++FSW +IG + G + AL
Sbjct: 78 DFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG 137
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G+ PD + P V + CG + + G+ VH +V + G V V ++L MY
Sbjct: 138 FVEML-ENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 196
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG L AR VFD +P R+ ++WNA++ GY +NG + + L MR+ ++P +T+S+
Sbjct: 197 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVST 256
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
+SAS +G + G++ H I G D + ++ Y G E E +F M K
Sbjct: 257 CLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKX 316
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V+W +IS Y L ++A+ Q+M E D +T+++++SA NL LG ++
Sbjct: 317 XVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 376
Query: 424 LAMRTGLISYIIIA-------------------------------NTLIDMYSKCKCIDK 452
+R GL S I++A NTL+ Y+ +
Sbjct: 377 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 436
Query: 453 ALEVFHQI------PD---------------------------------KNVISWTSIIL 473
AL +F+++ P+ N+ISWT+++
Sbjct: 437 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 496
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVA 531
GL N S EA++F RKM + L+PN+ T+ LSACA + +L G+ IH + +R +
Sbjct: 497 GLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYS 556
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
F ++ +L+DMY +CG + A F S ++ +N +++ YA G+ A +R +
Sbjct: 557 FSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 616
Query: 591 ID 592
D
Sbjct: 617 ED 618
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 208/443 (46%), Gaps = 42/443 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ L M++ I + + G +EG H+ L L
Sbjct: 229 NGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNIL 288
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L+ + G + +A +F M ++ +WN+LI GY + G +EA+ + Q M
Sbjct: 289 GTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRR-EN 347
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D T ++ +LK GKE+ + IR G E+D+ + + + MY KCG +V A+
Sbjct: 348 LKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK 407
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD ++D I WN ++S Y ++G + L LF M+ V P+ +T
Sbjct: 408 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITW----------- 456
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK----DVVSWT 368
N +I L G E +++F +M+S +++SWT
Sbjct: 457 ------------------------NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWT 492
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM++ + ++A+ + M+ G P+ TI LSACA L +L G +H +R
Sbjct: 493 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRN 552
Query: 429 GLISYII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
S+ I +L+DMY+KC I+KA VF + + ++I L + EA+
Sbjct: 553 QQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITL 612
Query: 488 FRKMM-LNLKPNSVTLVSILSAC 509
+R + +KP+++T+ S+LSAC
Sbjct: 613 YRSLEDGGVKPDNITITSLLSAC 635
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLF----SWNVLIGGYAKAGFFDEALSLYQRMFW 189
N + ++ G + A +F +M +F SW ++ G + G +EA+ L+ R
Sbjct: 457 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAI-LFLRKMQ 515
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR---FGYEADVDVVNALITMYVKCG 246
G++P+ +T L C + L G+ +H ++IR + + A ++ +L+ MY KCG
Sbjct: 516 ESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSAWIET--SLVDMYAKCG 573
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
D+ +A VF + +NAMIS Y G+ + + L+ + + V PD +T++S++S
Sbjct: 574 DINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 633
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVS 334
A D EV FSD VS
Sbjct: 634 ACNYGRDVNQAIEV--------FSDMVS 653
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
+N L NG E+A+ +L MQE + + + + C G +H + +
Sbjct: 495 MNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQ 554
Query: 127 H-LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ S + + + M+ K GD+ A VFG +L +N +I YA G EA++LY
Sbjct: 555 YSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY- 613
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMYVK 244
R GGVKPD T +L C D+ + EV ++ + G + ++ ++ +
Sbjct: 614 RSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLAS 673
Query: 245 CGDLVRARLVFDGMPKR 261
G+ +A + + MP +
Sbjct: 674 AGETDKALRLMEEMPYK 690
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 217/415 (52%), Gaps = 3/415 (0%)
Query: 109 RGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLI 168
R G +H + V + ++M+ + G++ A +F ++ RDL +W+ +I
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
+ ++G+ EALSL++ M G++ + L C V LK GK +H ++
Sbjct: 62 AAFVQSGYPQEALSLFRSM-QNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANV 120
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ D+ V AL++MY KCG A +F+ MP +D ++WNAMI+GY + GE L +F
Sbjct: 121 DLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHK 180
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
++ ++P+ T+ ++ A L+ D G +HG +IK GF + V LI MY G+
Sbjct: 181 LQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGS 240
Query: 349 REEGEKVFSRME-SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
E +F R KD VSW MI+ Y S A + M+ E P+ +TI +VL
Sbjct: 241 LSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLP 300
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
A A L L G+ LH +R G S + N LIDMY+KC +D + ++FH++ +K+ +S
Sbjct: 301 AVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVS 360
Query: 468 WTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
W ++ G ++ R A+ F +M ++ +S + +++LSAC G + G++I
Sbjct: 361 WNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKI 415
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 208/385 (54%), Gaps = 3/385 (0%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L RG E+H + G ++DV V ++TMY +CG++ A+ +F + RD ++W+A+I+
Sbjct: 4 LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ ++G + L LF M+ + + + L S + A V KLG+ +H +K D
Sbjct: 64 FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
+SV L+ MY G +F+RM KDVV+W MI+ Y P A+E + ++
Sbjct: 124 ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQL 183
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
P+ T+ +L A A L +LD G +H ++ G S + LIDMY+KC +
Sbjct: 184 SELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSG 243
Query: 453 ALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACA 510
A +FH+ K+ +SW +I G + + +A F +M L N++PN VT+V++L A A
Sbjct: 244 AEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVA 303
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNI 569
+ AL G +HA+ +R+G + N L+DMY +CG + + F+ +D +WN+
Sbjct: 304 HLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNV 363
Query: 570 LLTGYAERGQGALAEEFFRKMIDSK 594
+L GYA G+G+ A E F +M DS+
Sbjct: 364 MLAGYAVHGRGSCAIELFSRMQDSE 388
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 11/395 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++AL SMQ + ++ L++ + C G +H K L + +
Sbjct: 67 SGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISV 126
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G A +SM+ K G A +F +M +D+ +WN +I GYA+ G AL ++ ++ +
Sbjct: 127 GTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL-QLSE 185
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P+ T +L + DL +G +H +I+ G+E++ V ALI MY KCG L A
Sbjct: 186 LNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAE 245
Query: 253 LVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F ++D +SWN MI+GY +G + F M+ + P+ +T+ +V+ A +
Sbjct: 246 FLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHL 305
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G +H YVI+MGF V N LI MY G + EK+F M++KD VSW M+
Sbjct: 306 SALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVML 365
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-----HQLAM 426
+ Y A+E + M+ D + +VLSAC G + G K+ Q +
Sbjct: 366 AGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQL 425
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
L Y +A D+ + ++ L++ +P
Sbjct: 426 EPDLEHYACMA----DLLGRAGLFNEVLDLIKSMP 456
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
AL G EIH A + G+ D + ++ MY RCG + A F RD+ AW+ ++
Sbjct: 3 ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 62
Query: 573 GYAERGQGALAEEFFRKM 590
+ + G A FR M
Sbjct: 63 AFVQSGYPQEALSLFRSM 80
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 263/547 (48%), Gaps = 44/547 (8%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+R C + LHS++ K + L N+ +S++ K A +F +M R++
Sbjct: 10 LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
S+ ++ + +G EAL+LY M V+P+ + + VL+ CG V D++ G VH
Sbjct: 70 VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
HV E D ++NAL+ MYVKCG L+ A+ VF +P ++ SWN +I G+ + G
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189
Query: 282 GLMLFIMMREVLVDPDFMTLSSVIS----------------------------------A 307
LF M E PD ++ +S+I+ A
Sbjct: 190 AFNLFDQMPE----PDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKA 245
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVV 365
L+G+ +GR++H +IK G + LI MY + +E K+F + ++ +
Sbjct: 246 CGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLA 305
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
W +M+S Y + +A+ M G+ D T + L C NL L ++H L
Sbjct: 306 VWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLI 365
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEA 484
+ G ++ + LID+Y+K I+ AL +F ++P+K+V++W+S+I+G RL +
Sbjct: 366 ITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVF 425
Query: 485 LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
+F + L+L+ + L +L + + +L GK+IH+ L+ G + + AL DMY
Sbjct: 426 SLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMY 485
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLM 601
+CG ++ A F+ E D +W ++ G A+ G+ A KMI+S K N ++
Sbjct: 486 AKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITIL 545
Query: 602 GLFRKCQ 608
G+ C+
Sbjct: 546 GVLTACR 552
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 234/501 (46%), Gaps = 51/501 (10%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G+ +H VS+ L NA L M+VK G L A VF ++ ++ SWN LI G+AK
Sbjct: 124 GMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAK 183
Query: 174 AGFFDEALSLYQRM------FWVG-----------------------GVKPDVYTFPCVL 204
G +A +L+ +M W G+K D +TFPC L
Sbjct: 184 QGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCAL 243
Query: 205 RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD-GMPKRDR 263
+ CG + +L G+++H +I+ G E +++LI MY C L A +FD P +
Sbjct: 244 KACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAES 303
Query: 264 IS-WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++ WN+M+SGY NG++ + L + M D T S + + +L +VHG
Sbjct: 304 LAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHG 363
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+I G+ D V + LI +Y GN ++F R+ +KDVV+W+++I L
Sbjct: 364 LIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTL 423
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
+ M D ++ VL + L +L G ++H ++ G S +I L D
Sbjct: 424 VFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTD 483
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MY+KC I+ AL +F + + + +SWT II+G N R+ +A+ KM+ + KPN +T
Sbjct: 484 MYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKIT 543
Query: 502 LVSILSACARIG----ALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRMKP 552
++ +L+AC G A K I G P N ++D++ + GR K
Sbjct: 544 ILGVLTACRHAGLVEEAWTIFKSIETE--------HGLTPCPEHYNCMVDIFAKAGRFKE 595
Query: 553 AWNQFNSN--ERDVSAWNILL 571
A N N + D + W LL
Sbjct: 596 ARNLINDMPFKPDKTIWCSLL 616
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 197/435 (45%), Gaps = 43/435 (9%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D+ LR CG +K K +H +I+ G + ++N++I++Y KC AR +F
Sbjct: 2 DLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLF 61
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDE 314
D MP R+ +S+ M+S + +G + L L+ M E V P+ S+V+ A LVGD
Sbjct: 62 DEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDV 121
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+LG VH +V + D + N L+ MY+ G+ + ++VF + K+ SW T+I +
Sbjct: 122 ELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGH 181
Query: 375 EGSVL-------------PD-----------------KAVETYQMMEAEGSMPDEITIAS 404
L PD A++ MM +G D T
Sbjct: 182 AKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPC 241
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
L AC LG L +G ++H +++GL ++LIDMYS CK +D+A+++F DKN
Sbjct: 242 ALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIF----DKN 297
Query: 465 ------VISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+ W S++ G N + AL M + + +S T L C L
Sbjct: 298 SPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRL 357
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
++H + G D + + L+D+Y + G + A F +DV AW+ L+ G A
Sbjct: 358 ASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCAR 417
Query: 577 RGQGALAEEFFRKMI 591
G G L F M+
Sbjct: 418 LGLGTLVFSLFMDMV 432
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 187/415 (45%), Gaps = 10/415 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L N S AL++L M + +D ++ C G +H + K
Sbjct: 206 NSIIAGLADNAS-PHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIK 264
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGYAKAGFFDEAL 181
+ S ++ + M+ L A +F K L WN ++ GY G + AL
Sbjct: 265 SGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRAL 324
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
+ M G + D YTF L+ C +L+ +VH +I GYE D V + LI +
Sbjct: 325 GMIACMHH-SGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDL 383
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G++ A +F+ +P +D ++W+++I G G LF+ M + ++ D L
Sbjct: 384 YAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVL 443
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S V+ S + + G+++H + +K G+ + + L MY G E+ +F +
Sbjct: 444 SIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYE 503
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D +SWT +I + DKA+ M G+ P++ITI VL+AC G ++ +
Sbjct: 504 IDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTI 563
Query: 422 HQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + GL N ++D+++K +A + + + PDK + W S++
Sbjct: 564 FKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTI--WCSLL 616
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 231/434 (53%), Gaps = 4/434 (0%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ +WN + + + G EA+ + M V D TF +L G+ L+ GK++
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMI-NSRVACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V+R G + V V N LI MYVK G + RAR VF M + D +SWN MISG +G
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ +F+ + + PD T++SV+ A S L G L ++H +K G D V
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI +Y G EE E +F + D+ SW M+ Y S KA+ Y +M+ G +
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+IT+A+ A L L G ++ + ++ G + + + ++DMY KC ++ A +F+
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
+IP + ++WT++I G N + AL + M L+ ++P+ T +++ AC+ + AL
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE 576
G++IHA+ +++ AFD F+ +L+DMY +CG ++ A F +N +++WN ++ G A+
Sbjct: 1229 GRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQ 1288
Query: 577 RGQGALAEEFFRKM 590
G A +FF +M
Sbjct: 1289 HGNAEEALQFFEEM 1302
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 239/459 (52%), Gaps = 10/459 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H +V ++ V +GN ++M+VK G + A VF +M + DL SWN +I G A
Sbjct: 925 GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC---GGVPDLKRGKEVHVHVIRFGYEA 230
+G + ++ ++ + GG+ PD +T VLR C GG L ++H ++ G
Sbjct: 985 SGLEECSVGMFVDLL-RGGLLPDQFTVASVLRACSSLGGGCHL--ATQIHACAMKAGVVL 1041
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
D V LI +Y K G + A +F D SWNAM+ GY +G++ K L L+I+M+
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
E + +TL++ A+ + K G+++ V+K GF+ D+ V + ++ MYL G E
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161
Query: 351 EGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
++F+ + S D V+WTTMIS C E + A+ TY M PDE T A+++ AC
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENG-QEEHALFTYHHMRLSKVQPDEYTFATLVKAC 1220
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ L L+ G ++H ++ + +L+DMY+KC I+ A +F + + SW
Sbjct: 1221 SLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWN 1280
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
++I+GL + + EAL FF +M + P+ VT + +LSAC+ G + E +I
Sbjct: 1281 AMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKI 1340
Query: 529 -GVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA 566
G+ + + L+D R GR++ A +S + SA
Sbjct: 1341 YGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASA 1379
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 225/479 (46%), Gaps = 49/479 (10%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD--RDLFSWNVLIGGY 171
G H+ + + H L N ++M+ K G L A +F D RDL +WN ++ +
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 172 A---KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY 228
A + GF L +R F V +T V + C + +H + ++ G
Sbjct: 705 ADKARDGF--HLFRLLRRSF----VSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 229 EADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIM 288
+ DV V AL+ +Y K G + AR++FDGM RD + WN M+ Y + G + L+LF
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 289 MREVLVDPD---FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
+ PD TL+ V+ + + V + +L + +K Y
Sbjct: 819 FNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQ---------------------LKAY-- 855
Query: 346 FGNREEGEKVF---SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
G K+F + DV++W +S + +AV+ + M D +T
Sbjct: 856 ------GTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
+LS A L L+LG ++H + +R+GL + + N LI+MY K + +A VF Q+ +
Sbjct: 910 VVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE 969
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGA-LMCGKE 520
+++SW ++I G L+ ++ F ++ L P+ T+ S+L AC+ +G +
Sbjct: 970 VDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQ 1029
Query: 521 IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
IHA A++ GV D F+ L+D+Y + G+M+ A F N + D+++WN ++ GY G
Sbjct: 1030 IHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSG 1088
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 175/390 (44%), Gaps = 34/390 (8%)
Query: 197 VYTFP---CVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+++ P +LR DL GK H ++ G+ D + N LITMY KCG L AR
Sbjct: 623 IHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARK 682
Query: 254 VFDGMP--KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+FD P RD ++WNA++S + + G LF ++R V TL+ V L
Sbjct: 683 LFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLS 740
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+HGY +K+G DV V L+ +Y FG E +F M +DVV W M+
Sbjct: 741 ASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMM 800
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL-AMRTGL 430
Y + L +A+ + G PD++T+ ++ N+ L +L QL A T L
Sbjct: 801 KAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV-LEWQLKQLKAYGTKL 859
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
Y + +VI+W + ++EA+ F
Sbjct: 860 FMYDDDDD-----------------------GSDVIAWNKTLSWFLQRGETWEAVDCFVD 896
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+ + + + +T V +LS A + L GK+IH +R G+ + N L++MYV+ G
Sbjct: 897 MINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGS 956
Query: 550 MKPAWNQF-NSNERDVSAWNILLTGYAERG 578
+ A F NE D+ +WN +++G A G
Sbjct: 957 VSRARTVFWQMNEVDLVSWNTMISGCALSG 986
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 251/472 (53%), Gaps = 14/472 (2%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
GDL +A +F +M + D F N +I GYA++ EA+SLY M GV D YT+P V
Sbjct: 59 GDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVE-RGVPVDNYTYPFV 117
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L C + +K G+ H V++ G+ +D+ V+NALI Y CG A VFD RD
Sbjct: 118 LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDV 177
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHG 322
++WN MI+ + G K L M ++ + PD +T+ S++ A +G+ + G+ +H
Sbjct: 178 VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHS 237
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
Y ++G +++ V N ++ MY + E ++VF+R+ KDV+SWT+M+S S +
Sbjct: 238 YSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQE 297
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ +Q M+ DEIT+ VLSACA G LD G +H L + + +++ L+D
Sbjct: 298 ALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVD 357
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVT 501
MY+KC ID AL+VF ++ +NV +W ++I GL ++ +A+ F +M + L P+ VT
Sbjct: 358 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 417
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCGRMKPAWNQFNS 559
+++L AC+ G + G + A++ + + + ++D+ R ++ A F
Sbjct: 418 FIALLCACSHAGLVDEGLAMF-QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL-AFIE 475
Query: 560 N---ERDVSAWNILLTGYAERGQGALAEEFFRKMI----DSKGNWRKLMGLF 604
N + + W LL G LAE+ R++I DS G + L L+
Sbjct: 476 NMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLY 527
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 192/377 (50%), Gaps = 5/377 (1%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + + G G A VF + RD+ +WN++I + G ++A L M + +
Sbjct: 150 NALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNL 209
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD T ++ C + +L+RGK +H + G + ++ V NA++ MY KC D+ A+
Sbjct: 210 RPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQE 269
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+ + ++D +SW +M+SG ++G + + L LF M+ ++ D +TL V+SA G
Sbjct: 270 VFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGA 329
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
G+ +H + K + D+ + L+ MY G+ + +VF RM ++V +W +I
Sbjct: 330 LDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGG 389
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ A+ + ME + MPD++T ++L AC+ G +D G+ + Q AM+
Sbjct: 390 LAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIE 448
Query: 434 IIIAN--TLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++D+ + + +D AL +P K N + W +++ R + F+ +
Sbjct: 449 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR-SGGHFDLAEKIGR 507
Query: 491 MMLNLKPNSVTLVSILS 507
++ L+P+S +LS
Sbjct: 508 RVIELEPDSCGRYVMLS 524
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 65 SRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKT 124
S L+ L +G ++AL MQ I +DE LV ++ C D+G Y+H ++ K
Sbjct: 284 SMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKF 343
Query: 125 MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLY 184
+ + L A + M+ K G + A VF +M R++F+WN LIGG A G ++A+SL+
Sbjct: 344 EINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLF 403
Query: 185 QRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV-HVHVIRFGYEADVDVVNALITMYV 243
+M + PD TF +L C + G + +F E ++ ++ +
Sbjct: 404 DQMEH-DKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLC 462
Query: 244 KCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
+ + A + MP K + + W ++ G + L I R + ++PD
Sbjct: 463 RARKVDDALAFIENMPIKANSVLWATLLGACRSGGHF--DLAEKIGRRVIELEPD 515
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 244/512 (47%), Gaps = 74/512 (14%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR------- 186
N +S + + G L A VF ++ R+ FS+N L+ YA+ G DEA +L++
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 187 --------------------MFWVGGVKPD-----VYTFPCVLRTCGGVPDLKRGKEVHV 221
+ ++ + D Y+F L C D + G++VH
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V R + DV + +AL+ MY KC AR VFD MP+R+ +SWN++I+ Y +NG +
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLI 340
LMLF+ M PD +TLSSV+SA + ++ GR+VH +++K DD+ + N L+
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 341 KMYLSFG-------------------------------NREEGEKVFSRMESKDVVSWTT 369
MY G N E+ + VFS+M K+V++W
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+I+ Y + ++A+ + ++ + P T +VL+AC + +L LG + H ++ G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 430 LI------SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
S + + N+L+DMY K ID +VF ++ ++ +SW ++I+G N R+ +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALL 541
AL F +M+ N P+SVT++ +LSAC G + G+ H+ G+ ++
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMV 535
Query: 542 DMYVRCGRMKPAWNQFNS--NERDVSAWNILL 571
D+ R G +K A N E D W LL
Sbjct: 536 DLLGRAGHLKEAEELINDMPMEPDSVLWASLL 567
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 212/445 (47%), Gaps = 41/445 (9%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G AL++L +M + ++ + + + C ++ G +H +V+++ V +
Sbjct: 130 GHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIR 189
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A + M+ K A VF M +R++ SWN LI Y + G EAL L+ M G
Sbjct: 190 SALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMM-AAGF 248
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGDLVRAR 252
PD T V+ C G+ + G++VH H+++ D+ + NAL+ MY KCG AR
Sbjct: 249 SPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEAR 308
Query: 253 LVFDGMPKR-------------------------------DRISWNAMISGYFENGEYMK 281
+FD MP R + I+WN +I+ Y +NGE +
Sbjct: 309 CIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEE 368
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF------SDDVSV 335
+ LF+ ++ + P T +V++A + D +LG++ H +V+K GF DV V
Sbjct: 369 AIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFV 428
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N L+ MYL G+ ++G KVF RM ++D VSW MI Y + A+ ++ M
Sbjct: 429 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNE 488
Query: 396 MPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD +T+ VLSAC G +D G + H + G+ ++D+ + + +A
Sbjct: 489 NPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAE 548
Query: 455 EVFHQIP-DKNVISWTSIILGLRLN 478
E+ + +P + + + W S++ RL+
Sbjct: 549 ELINDMPMEPDSVLWASLLGACRLH 573
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 219/477 (45%), Gaps = 83/477 (17%)
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
P+L + H +++ + ++N L++ Y + G L AR VFD +P R+ S+NA+
Sbjct: 30 APNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNAL 89
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG----------------- 312
+S Y G + LF E + DPD + ++V++A G
Sbjct: 90 LSAYARLGRPDEARALF----EAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHAD 145
Query: 313 --------------------DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
D + G +VHG V + +DDV + + L+ MY E+
Sbjct: 146 DFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDA 205
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF M ++VVSW ++I+CYE + +A+ + M A G PDE+T++SV+SACA L
Sbjct: 206 RRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGL 265
Query: 413 GNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKC------KCI--------------- 450
G ++H ++ L +++ N L+DMY+KC +CI
Sbjct: 266 AADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSI 325
Query: 451 ----------DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ A VF Q+ +KNVI+W +I N EA+ F ++ + + P
Sbjct: 326 LTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTH 385
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAF------DGFLPNALLDMYVRCGRMKPA 553
T ++L+AC I L G++ H H L+ G F D F+ N+L+DMY++ G +
Sbjct: 386 YTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDG 445
Query: 554 WNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK--LMGLFRKC 607
F RD +WN ++ GYA+ G+ A F +M+ S N ++G+ C
Sbjct: 446 AKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 502
>gi|255553863|ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542954|gb|EEF44490.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 228/421 (54%), Gaps = 11/421 (2%)
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG-DLVRAR 252
KP +Y +L+TC V G ++H HV++ G E D V N+L+ +Y K D R
Sbjct: 50 KPFIY--ASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETR 107
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG+ RD ISW +MI+GY + + K L LF M +V VDP+ TLS+VI A +G
Sbjct: 108 RVFDGLYFRDVISWTSMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTDLG 167
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG+ H ++ GF + + + LI +Y ++ ++F + D + WT++IS
Sbjct: 168 TLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSVIS 227
Query: 373 CYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + + DKA+ + +M+ + G PD T +VL+AC L L G ++H + +G
Sbjct: 228 AYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFS 287
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRK 490
+++ ++L+DMY KC +D++ VF ++ KN +SW++++ G N FE++I FR+
Sbjct: 288 GNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGF-CQNGDFESVIRIFRE 346
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
M + + ++L ACA + A+ GKE+H +R G D + +AL+D+Y +CG +
Sbjct: 347 M--GEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCI 404
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLFRKC 607
A F R++ WN ++ G+A+ G A F +M+ +K ++ +G+ C
Sbjct: 405 DFAHRIFTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFAC 464
Query: 608 Q 608
Sbjct: 465 S 465
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 244/476 (51%), Gaps = 11/476 (2%)
Query: 57 SIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLY 116
S KN ++ C +G+L AL L+S+ I +L++ C ++ GL
Sbjct: 13 SFNLKNKEIKIIGFCKSGALLHALDILNSIDSREISNKPFIYASLLQTCTKVVSFNHGLQ 72
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+H+ V K+ +GN+ L+++ K D VF + RD+ SW +I GY K
Sbjct: 73 IHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGE 132
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+AL L+ M V GV P+ +T V++ C + L GK H ++ G+ ++ +
Sbjct: 133 KPKKALDLFWEMLDV-GVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIG 191
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLV 294
+ALI +Y + +L AR +FD + + D I W ++IS Y N Y K L F +M R++ +
Sbjct: 192 SALIDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGL 251
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T +V++A + K G+EVH +I GFS +V V + L+ MY G +E ++
Sbjct: 252 APDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQR 311
Query: 355 VFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
VF RM K+ VSW+ ++ C G + + ++ M G D + +VL ACA L
Sbjct: 312 VFDRMSVKNSVSWSALLGGFCQNGDF--ESVIRIFREM---GEADDLYSFGTVLRACAGL 366
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G ++H +R G +II + L+D+Y+KC CID A +F ++ +N+I+W S+I
Sbjct: 367 AAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSMI 426
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
G N + EAL F +M+ KP+ +T + +L AC+ K I + +R
Sbjct: 427 CGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSHTDREPLAKGILCYDVR 482
>gi|222616791|gb|EEE52923.1| hypothetical protein OsJ_35543 [Oryza sativa Japonica Group]
Length = 1348
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 253/544 (46%), Gaps = 20/544 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE---WKRGYDEGLYLHSV 120
++ L L G L AL LD + + A L+ C R L +H +
Sbjct: 64 SAELRRLARVGRLPSALALLDHLSHRGVPATASAFAALLTACRSLAHARQVHAHLRVHGL 123
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
S L RL + +++ G A V + FSWN L+ G+ + G
Sbjct: 124 DSNEF--LLARL----VELYLALGAREDARKVLDGLPRASSFSWNALLHGHVRRGRGQAG 177
Query: 181 LSLYQRM--FWVGGVKPDVYTFPCVLRTCGG--VPDLKRGKEVHVHVIRFGYE-ADVDVV 235
++ G + YT+ CVL++ G P + H +I+ Y A ++
Sbjct: 178 AAVVDGFAEMRAAGADANEYTYGCVLKSISGSAAPSMAMATATHAMLIKNAYAGAPRMLM 237
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
L+ +Y KCG + A +VF+ MP+RD ++W A+I+G+ G + L F M E +
Sbjct: 238 TGLMDVYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKGMKREALEHFRWMVEDGIK 297
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN---PLIKMYLSFGNREEG 352
+ + L+SV+ + LGRE+HG+V+K F V N L+ MY G+ G
Sbjct: 298 VNSVVLTSVVPVIGELRAWNLGREIHGFVLKK-FQHRKDVGNIQAGLVDMYCKCGDMVSG 356
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF + ++VVSWT ++S Y + PD+A+ M+ EG PD I + +VL C L
Sbjct: 357 RRVFYSAKKRNVVSWTALMSGYASNGRPDQALRCILWMQQEGIRPDLIAVGTVLPVCTKL 416
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L G +LH A+R + I + +LI MY C D + VFH + K V +WT+++
Sbjct: 417 KALREGKELHAYALRRWFLPNISLCTSLITMYGTCSHSDYSQRVFHVMDKKTVQAWTALV 476
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
N A+ FR M+L N +P++V + +LSAC IGA GKE+H AL++ +
Sbjct: 477 DAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSACRDIGASKLGKELHGQALKLRME 536
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKM 590
+ L+ MY CG +K A FN E S ++ YA + A E F M
Sbjct: 537 PLPLVAAGLVSMYGTCGDLKAAQRVFNRIESKGSLTCTAIIEAYAINQRHKEALELFAWM 596
Query: 591 IDSK 594
+ ++
Sbjct: 597 LSNR 600
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 199/385 (51%), Gaps = 4/385 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L + ++ K G + A VF +M +RD+ +W +I G+A G EAL ++ M
Sbjct: 236 LMTGLMDVYFKCGKVKPAVMVFEEMPERDVVAWGAVIAGFAHKGMKREALEHFRWMVE-D 294
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNA-LITMYVKCGDLV 249
G+K + V+ G + G+E+H V++ F + DV + A L+ MY KCGD+V
Sbjct: 295 GIKVNSVVLTSVVPVIGELRAWNLGREIHGFVLKKFQHRKDVGNIQAGLVDMYCKCGDMV 354
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
R VF KR+ +SW A++SGY NG + L + M++ + PD + + +V+
Sbjct: 355 SGRRVFYSAKKRNVVSWTALMSGYASNGRPDQALRCILWMQQEGIRPDLIAVGTVLPVCT 414
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ + G+E+H Y ++ F ++S+C LI MY + + + ++VF M+ K V +WT
Sbjct: 415 KLKALREGKELHAYALRRWFLPNISLCTSLITMYGTCSHSDYSQRVFHVMDKKTVQAWTA 474
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
++ Y + P AV+ ++ M PD + I+ +LSAC +G LG +LH A++
Sbjct: 475 LVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSACRDIGASKLGKELHGQALKLR 534
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ ++A L+ MY C + A VF++I K ++ T+II +N R EAL F
Sbjct: 535 MEPLPLVAAGLVSMYGTCGDLKAAQRVFNRIESKGSLTCTAIIEAYAINQRHKEALELFA 594
Query: 490 KMMLN-LKPNSVTLVSILSACARIG 513
M+ N PN+ T +L C G
Sbjct: 595 WMLSNRFVPNNGTFDVLLRICEAAG 619
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 175/358 (48%), Gaps = 9/358 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G +AL++ M E I V+ L ++V + R ++ G +H V K H +G
Sbjct: 279 GMKREALEHFRWMVEDGIKVNSVVLTSVVPVIGELRAWNLGREIHGFVLKKFQHRK-DVG 337
Query: 134 N---AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N + M+ K GD+ VF R++ SW L+ GYA G D+AL + W+
Sbjct: 338 NIQAGLVDMYCKCGDMVSGRRVFYSAKKRNVVSWTALMSGYASNGRPDQALRC---ILWM 394
Query: 191 G--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
G++PD+ VL C + L+ GKE+H + +R + ++ + +LITMY C
Sbjct: 395 QQEGIRPDLIAVGTVLPVCTKLKALREGKELHAYALRRWFLPNISLCTSLITMYGTCSHS 454
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
++ VF M K+ +W A++ Y +NG+ + +F M PD + +S ++SA
Sbjct: 455 DYSQRVFHVMDKKTVQAWTALVDAYLKNGDPSTAVDVFRSMLLSNRRPDAVAISRMLSAC 514
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G KLG+E+HG +K+ V L+ MY + G+ + ++VF+R+ESK ++ T
Sbjct: 515 RDIGASKLGKELHGQALKLRMEPLPLVAAGLVSMYGTCGDLKAAQRVFNRIESKGSLTCT 574
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+I Y + +A+E + M + +P+ T +L C G D ++ Q M
Sbjct: 575 AIIEAYAINQRHKEALELFAWMLSNRFVPNNGTFDVLLRICEAAGLHDEALQDFQTPM 632
>gi|302756319|ref|XP_002961583.1| hypothetical protein SELMODRAFT_76916 [Selaginella moellendorffii]
gi|300170242|gb|EFJ36843.1| hypothetical protein SELMODRAFT_76916 [Selaginella moellendorffii]
Length = 493
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 239/483 (49%), Gaps = 24/483 (4%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + A VF + DR++FSWN++I YA+ G +A +++R+ + GVKP
Sbjct: 1 MYGKCGKVDEARRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRID-LEGVKPSRV 59
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFDG 257
TF VL +C G L G E+H ++ G+E+DV AL+ MY +C GD AR VFDG
Sbjct: 60 TFLGVLDSCNGARGLAAGLEIHARMVEGGFESDVVACTALLNMYGRCSGDARAARAVFDG 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFI------------MMREVLVDPDFMTLSSVI 305
M RD +SWNA++ Y + + + + L+ +MR V+ D + +SVI
Sbjct: 120 MEVRDLVSWNAIVVVYSQKAQCEEAVKLYRQMLLQAALEVLEIMRAQRVELDRVGYTSVI 179
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+G + GR +H + K G DV+V + L+ MY G+ E+ VF+ +E KD
Sbjct: 180 DTCTSLGALEEGRRIHSQIAKQGLETDVAVGSALVNMYGKCGDLEDARAVFAGIEGKDRC 239
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN-LDLGIKLHQL 424
+WT+M+ Y D+A + +Q M+ EG D IT+ SVLS C+ + L G +H
Sbjct: 240 AWTSMLGAYAQHGDGDRAFQVFQTMDLEGEKSDPITLISVLSVCSDKSSALSQGKAIHSS 299
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFE 483
+GL ++A LIDMY+ C + A F I K +V+ W++II G + E
Sbjct: 300 ISGSGLELDGLVATALIDMYATCGSLRTARNFFDAIQAKGDVVLWSAIISGYSQHGDWEE 359
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNA 539
+ FR M L L+P++ T+ S+LSA + G + E A + A D ++
Sbjct: 360 STTLFRLMQLEGLEPDNRTITSVLSAFSHGGLVDQATEWFGTMVEACDMKPAIDHYM--C 417
Query: 540 LLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKGNW 597
L+D+ R G ++ A + D AW LL G +M D G +
Sbjct: 418 LIDLLGRAGCLEAAELVMKRMPCKADTVAWTTLLGSCTTHGDVHRGARAAGQMRDDSGAY 477
Query: 598 RKL 600
L
Sbjct: 478 VSL 480
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 161/336 (47%), Gaps = 28/336 (8%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L+ AL+ L+ M+ + +D +++ C +EG +HS ++K V +G+A
Sbjct: 153 LQAALEVLEIMRAQRVELDRVGYTSVIDTCTSLGALEEGRRIHSQIAKQGLETDVAVGSA 212
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++M+ K GDL A VF + +D +W ++G YA+ G D A ++Q M + G K
Sbjct: 213 LVNMYGKCGDLEDARAVFAGIEGKDRCAWTSMLGAYAQHGDGDRAFQVFQTMD-LEGEKS 271
Query: 196 DVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D T VL C L +GK +H + G E D V ALI MY CG L AR
Sbjct: 272 DPITLISVLSVCSDKSSALSQGKAIHSSISGSGLELDGLVATALIDMYATCGSLRTARNF 331
Query: 255 FDGM-PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
FD + K D + W+A+ISGY ++G++ + LF +M+ ++PD T++SV+SA
Sbjct: 332 FDAIQAKGDVVLWSAIISGYSQHGDWEESTTLFRLMQLEGLEPDNRTITSVLSAFS---- 387
Query: 314 EKLGREVHGYVIKMG---FSDDVSVCN--PLIKMYLSF-------GNREEGEKVFSRMES 361
HG ++ F V C+ P I Y+ G E E V RM
Sbjct: 388 -------HGGLVDQATEWFGTMVEACDMKPAIDHYMCLIDLLGRAGCLEAAELVMKRMPC 440
Query: 362 K-DVVSWTTMI-SCYEGSVLPDKAVETYQMMEAEGS 395
K D V+WTT++ SC + A QM + G+
Sbjct: 441 KADTVAWTTLLGSCTTHGDVHRGARAAGQMRDDSGA 476
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 231/432 (53%), Gaps = 8/432 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LG++ L+ VK GD+ A + F +M ++D+ WNV+IGG+ + G F E +L+ M +
Sbjct: 192 LGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLY-N 250
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
++P T ++++CG + +L GK +H V+ FG D V+ LI MY K GD+ A
Sbjct: 251 KIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESA 310
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF--IMMREVLVDPDFMTLSSVISASE 309
R +F+ MP R+ +SWN MISGY +NG ++ L LF ++M +V D T+ S+I
Sbjct: 311 RWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSG--TVVSLIQLCS 368
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D G+ +HG++ + G ++ + ++ +Y G+ VF RM++K+V+SWT
Sbjct: 369 RTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTA 428
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
M+ + A++ + M+ E + +T+ S++ C LG L G +H R
Sbjct: 429 MLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFH 488
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVF-HQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
S +++ LIDMY+KC I+ A VF + + K+VI + S+I G ++ +AL +
Sbjct: 489 FASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVY 548
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVR 546
+M L+PN T VS+LSAC+ G + G + + ++ L ++D+ R
Sbjct: 549 HRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSR 608
Query: 547 CGRMKPAWNQFN 558
GR++ A N
Sbjct: 609 AGRLRQAEELIN 620
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 234/458 (51%), Gaps = 4/458 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++ + G L +A VF ++ N ++ GY + +++ + L +M ++
Sbjct: 95 LVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELL-KMMSRCHLEF 153
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D YT L+ C + D + G EV + G + ++++ VK GD++ A+ F
Sbjct: 154 DSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFF 213
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M ++D + WN MI G+ + G + +G LF+ M ++P +T+ S+I + + +
Sbjct: 214 HQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLT 273
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ +HG+V+ G S D V LI MY G+ E +F M S+++VSW MIS Y
Sbjct: 274 FGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYV 333
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ L + + +Q + + D T+ S++ C+ +LD G LH R GL ++
Sbjct: 334 QNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLV 393
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ ++D+Y+KC + A VF ++ +KNVISWT++++GL N + +AL F +M
Sbjct: 394 LPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNER 453
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+ N++TLVS++ C +G L G+ +HA R A + + AL+DMY +C ++ A
Sbjct: 454 VTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAE 513
Query: 555 NQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F +DV +N +++GY G G A + +M
Sbjct: 514 MVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRM 551
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 189/384 (49%), Gaps = 7/384 (1%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+++L++ C R G +H V R+ + M+ K GD+ A ++F M
Sbjct: 258 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 317
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
R+L SWNV+I GY + G E L L+Q++ + V D T +++ C DL G
Sbjct: 318 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLI-MDDVGFDSGTVVSLIQLCSRTADLDGG 376
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H + R G + ++ + A++ +Y KCG L A VF+ M ++ ISW AM+ G +N
Sbjct: 377 KILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQN 436
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G L LF M+ V + +TL S++ L+G + GR VH + + F+ +V V
Sbjct: 437 GHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVM 496
Query: 337 NPLIKMYLSFGNREEGEKVFSR-MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
LI MY E VF + KDV+ + +MIS Y L KA+ Y M EG
Sbjct: 497 TALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGL 556
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
P+E T S+LSAC+ G ++ GI L Q + + ++D+ S+ + +A
Sbjct: 557 QPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAE 616
Query: 455 EVFHQIPDKNVISWTSIILGLRLN 478
E+ +Q+P + TS IL LN
Sbjct: 617 ELINQMP----FTPTSGILETLLN 636
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 180/373 (48%), Gaps = 2/373 (0%)
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
D +V L+ Y G L AR VFD +P+ + NAM++GY +N Y + L MM
Sbjct: 87 GDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMM 146
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++ D T + + A + D ++G EV G + G + + + ++ + G+
Sbjct: 147 SRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDI 206
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ F +M KDVV W MI + L + + M P +T+ S++ +C
Sbjct: 207 MCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSC 266
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
+ NL G +H + G+ + TLIDMY K ++ A +F +P +N++SW
Sbjct: 267 GEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWN 326
Query: 470 SIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I G N E L F+K+++ ++ +S T+VS++ C+R L GK +H R
Sbjct: 327 VMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRR 386
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G+ + LP A++D+Y +CG + A + F ++V +W +L G A+ G A + F
Sbjct: 387 GLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF 446
Query: 588 RKMIDSKGNWRKL 600
+M + + + L
Sbjct: 447 DQMQNERVTFNAL 459
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG L + L+ + ++ D +V+L++LC D G LH + + L++ L
Sbjct: 335 NGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVL 394
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + ++ K G L +A VF +M ++++ SW ++ G A+ G +AL L+ +M
Sbjct: 395 PTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQM-QNER 453
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T ++ C + L+ G+ VH + RF + ++V V+ ALI MY KC + A
Sbjct: 454 VTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAE 513
Query: 253 LVFD-GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+VF G+ +D I +N+MISGY +G K L ++ M + P+ T S++SA
Sbjct: 514 MVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 573
Query: 312 G 312
G
Sbjct: 574 G 574
>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 257/519 (49%), Gaps = 9/519 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+AL M C +E +++R C + +G +H V K + LG+
Sbjct: 23 EEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKCIHGCVIKHGFESNQILGSVL 82
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ ++ K+G + A +F + + D+ SW +I +AG + +AL +Y M GV P+
Sbjct: 83 IDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWSQALRIYIDMI-KAGVYPN 141
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
+TF VL G LK GK VH H+I FG E ++ V AL+ MY KC + A +
Sbjct: 142 EFTFVKVL-AAAGFLGLKHGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISK 200
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P+ DR W A++SG +N + + ++ F M + + T S+++A L+ L
Sbjct: 201 LTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSILNACSLILSLDL 260
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR-EEGEKVFSRMESKDVVSWTTMISCYE 375
GR++H VI G DD+ V N L+ MY+ + E+G +VF +ES DV+SWT++I+
Sbjct: 261 GRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLS 320
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ ++Y M A G P+ +T++ +L +C + +KLH ++T I
Sbjct: 321 EHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIA 380
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS-FEALIFFRKMMLN 494
++N L+D Y+ + +D A + + ++ +++T L RLN E + M N
Sbjct: 381 VSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTG--LATRLNQMGHHEMALHVINHMFN 438
Query: 495 --LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+K + ++ LSA A + ++ G ++H+++++ G+ + N L+ Y +CG +
Sbjct: 439 DDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRD 498
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F E D+ +WN L++ A G + A F M
Sbjct: 499 AERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDM 537
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 222/442 (50%), Gaps = 9/442 (2%)
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
M RD+ SW ++ Y K +EAL ++Q M G P+ +TF VLR C + +
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPC-PNEFTFSSVLRACSALGEFSD 59
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
GK +H VI+ G+E++ + + LI +Y K G + A +F + D +SW MIS +
Sbjct: 60 GKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQ 119
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
G++ + L ++I M + V P+ T V++A+ +G K G+ VH ++I G ++ V
Sbjct: 120 AGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHAHLIVFGVELNLVV 178
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY ++ ++ D WT ++S ++ +AV +Q MEA G
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC-IDKAL 454
+ + T S+L+AC+ + +LDLG ++H + GL I + N L+DMY KC ++ L
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298
Query: 455 EVFHQIPDKNVISWTSIILGLR---LNNRSFEALIFFRKMMLNLKPNSVTLVSILSACAR 511
VF I +VISWTS+I GL + SF++ + L+PNSVTL IL +C
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDS--YMEMTASGLQPNSVTLSIILRSCRA 356
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNIL 570
+ ++H H ++ D + NAL+D Y R+ AW+ N ++RD + L
Sbjct: 357 AKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGL 416
Query: 571 LTGYAERGQGALAEEFFRKMID 592
T + G +A M +
Sbjct: 417 ATRLNQMGHHEMALHVINHMFN 438
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 230/496 (46%), Gaps = 17/496 (3%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L G QAL+ M + + +E V ++ + G G +H+ +
Sbjct: 114 ISSLVQAGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGF-LGLKHGKVVHAHLIVFGV 172
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
L++ + A + M+ K + A + + D F W ++ G A+ EA+ +Q
Sbjct: 173 ELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQE 232
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G+ + +T+ +L C + L G+++H VI G E D+ V NAL+ MY+KC
Sbjct: 233 M-EASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCS 291
Query: 247 DLVRARL-VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
V L VF+G+ D ISW ++I+G E+G + ++ M + P+ +TLS ++
Sbjct: 292 HEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIIL 351
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+ ++HG+VIK D++V N L+ Y ++ + M +D +
Sbjct: 352 RSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDAL 411
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
++T + + + A+ M + D ++A LSA A L +++ G++LH +
Sbjct: 412 TYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYS 471
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+++GL S I ++N L+ Y KC A F +I + +++SW +I L AL
Sbjct: 472 VKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSAL 531
Query: 486 IFFRKMMLN-LKPNSVTLVSILSACARIGALMCG-------KEIHAHALRIGVAFDGFLP 537
F M L +KP+SVT + +L C G + G KE+H I D ++
Sbjct: 532 SAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHG----IEPQLDHYV- 586
Query: 538 NALLDMYVRCGRMKPA 553
L D+ R GR++ A
Sbjct: 587 -CLFDLLGRAGRLEEA 601
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 176/397 (44%), Gaps = 3/397 (0%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
L+ L N L +A+ M+ I + ++++ C D G +H+ V
Sbjct: 214 LSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGL 273
Query: 127 HLSVRLGNAFLSMFVKFG-DLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
+ +GNA + M++K ++ VF + D+ SW LI G ++ GF + Y
Sbjct: 274 EDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYM 333
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M G++P+ T +LR+C + ++H HVI+ + D+ V NAL+ Y
Sbjct: 334 EMT-ASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGN 392
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
+ A + M +RD +++ + + + G + L + M + D +++ +
Sbjct: 393 ERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFL 452
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SAS + + G ++H Y +K G +SV N L+ Y G + E+ F+ + D+V
Sbjct: 453 SASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIV 512
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQL 424
SW +IS A+ + M G PD +T VL C G +D+G++ + +
Sbjct: 513 SWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSM 572
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
G+ + L D+ + +++A+E+ +P
Sbjct: 573 KEMHGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMP 609
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 281/548 (51%), Gaps = 29/548 (5%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQ----ELNICVDEDALVNLVRL-CEWKRGYDEGLYLH 118
NS ++ C G A K MQ ELN+ +E L +LV C D GL L
Sbjct: 314 NSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLA---DCGLVLL 370
Query: 119 ----SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+ + K+ + +G+A ++ F ++G + A +F +M DR+ + N L+ G A+
Sbjct: 371 EQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQ 430
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK----EVHVHVIRFGY-E 229
+EA +++ M + V+ + + +L T +LK GK EVH ++ R G +
Sbjct: 431 HQGEEAAKVFKEMKDL--VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD 488
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IM 288
A + + NAL+ MY KC + A VF MP +D +SWN+MISG N + + + F M
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM 548
Query: 289 MREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGN 348
R +V +F +S++ S S L G LGR++HG K G DVSV N L+ +Y +
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSL-GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDS 607
Query: 349 REEGEKVFSRMESKDVVSWTTMISC---YEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
E +KVF +M D VSW + I YE SVL +A++ + M G P+ +T ++
Sbjct: 608 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVL--QALKYFLEMMQAGWRPNRVTFINI 665
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KN 464
L+A + L LG ++H L ++ + I N L+ Y KC+ ++ +F ++ + ++
Sbjct: 666 LAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRD 725
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHA 523
+SW S+I G + +A+ MM K + T ++LSACA + L G E+HA
Sbjct: 726 EVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHA 785
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGAL 582
A+R + D + +AL+DMY +CG++ A F R++ +WN +++GYA G G
Sbjct: 786 CAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQK 845
Query: 583 AEEFFRKM 590
A + F +M
Sbjct: 846 ALKIFTRM 853
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 251/487 (51%), Gaps = 17/487 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEW---KRGYDEGLYLHSVVSKT-MSHLSVRL 132
E+A K M++L E +V L E+ K G +G +H+ + ++ + + +
Sbjct: 434 EEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISI 493
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GNA ++M+ K + +A VF M +D SWN +I G F+EA+S + M G
Sbjct: 494 GNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMK-RNG 552
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ P ++ L +C + L G+++H ++G + DV V NAL+T+Y + + +
Sbjct: 553 MVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQ 612
Query: 253 LVFDGMPKRDRISWNAMISGYFE-NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF MP+ D++SWN+ I + ++ L F+ M + P+ +T ++++A
Sbjct: 613 KVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSF 672
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTM 370
LG ++H ++K +DD ++ N L+ Y E+ E +FSRM E +D VSW +M
Sbjct: 673 SVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSM 732
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS Y S + KA++ M G D T A+VLSACA + L+ G+++H A+R L
Sbjct: 733 ISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACL 792
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFR 489
S +++ + L+DMY+KC ID A F +P +N+ SW S+I G + +AL IF R
Sbjct: 793 ESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTR 852
Query: 490 KMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMY 544
P+ VT V +LSAC+ +G + E + H +G + G P + ++D+
Sbjct: 853 MKQHGQSPDHVTFVGVLSACSHVGLV---DEGYKHFKSMGEVY-GLSPRIEHFSCMVDLL 908
Query: 545 VRCGRMK 551
R G +K
Sbjct: 909 GRAGDVK 915
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 255/505 (50%), Gaps = 22/505 (4%)
Query: 111 YDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGG 170
YD +LH + KT V N ++++V+ G+L A +F +M ++L SW+ LI G
Sbjct: 157 YDAN-HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 215
Query: 171 YAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG--GVPDLKRGKEVHVHVIRFGY 228
Y + DEA SL++ + G+ P+ + LR C G +K G ++H + +
Sbjct: 216 YTQNRMPDEACSLFKGVI-SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274
Query: 229 EADVDVVNALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
+D+ + N L++MY C G + A VFD + R+ ++WN++IS Y G+ + LF
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334
Query: 288 MMR----EVLVDPDFMTLSSVISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIK 341
+M+ E+ + P+ TL S+++A+ + D L ++ + K GF D+ V + L+
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVN 394
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
+ +G + + +F +M ++ V+ ++ ++A + ++ M+ + E +
Sbjct: 395 GFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSE-S 453
Query: 402 IASVLSACACLGNLDLGIK----LHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEV 456
+ +LS NL G + +H R+GL+ + I I N L++MY KC ID A V
Sbjct: 454 LVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSV 513
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F +P K+ +SW S+I GL N R EA+ F M N + P++ +++S LS+C+ +G L
Sbjct: 514 FQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWL 573
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ-FNSNERDVSAWNILLTGY 574
G++IH + G+ D + NALL +Y + F E D +WN +
Sbjct: 574 TLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGAL 633
Query: 575 AERGQGAL-AEEFFRKMIDSKGNWR 598
A+ L A ++F +M+ + WR
Sbjct: 634 AKYEASVLQALKYFLEMM--QAGWR 656
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 218/471 (46%), Gaps = 12/471 (2%)
Query: 43 NAQSV-QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
NA SV Q++ +++T S NS ++ L N E+A+ +M+ + ++++
Sbjct: 509 NACSVFQLMPSKDTVSW-----NSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIST 563
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ C G +H K L V + NA L+++ + + VF +M + D
Sbjct: 564 LSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQ 623
Query: 162 FSWNVLIGGYAK-AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
SWN IG AK +AL + M G +P+ TF +L L G ++H
Sbjct: 624 VSWNSFIGALAKYEASVLQALKYFLEMM-QAGWRPNRVTFINILAAVSSFSVLGLGHQIH 682
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEY 279
++++ D + NAL+ Y KC + ++F M +RD +SWN+MISGY +G
Sbjct: 683 ALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGIL 742
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
K + L M + D T ++V+SA V + G EVH ++ DV V + L
Sbjct: 743 HKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSAL 802
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G + + F M +++ SW +MIS Y KA++ + M+ G PD
Sbjct: 803 VDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDH 862
Query: 400 ITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T VLSAC+ +G +D G K + GL I + ++D+ + + K +
Sbjct: 863 VTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIK 922
Query: 459 QIP-DKNVISWTSIILG-LRLNNRSFEALIFFRKMMLNLKPNSVTLVSILS 507
+P D N++ W +++ R N R+ E KM++ L+P + +LS
Sbjct: 923 TMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLS 973
>gi|255566993|ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536267|gb|EEF37919.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 576
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 270/526 (51%), Gaps = 26/526 (4%)
Query: 37 RHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNI----- 91
R FS + + + + L+T N ++ + NS+ N + ++ S+ ++ Q L I
Sbjct: 12 RKFSKQRSFTSENLHTYN-NAYQLLDKNSQPNSVSIHRSMLDSIHKNLPFQALKIFKKNI 70
Query: 92 ------CVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGD 145
+DE + ++ C + ++ ++ S S ++V N+ ++M+ K G
Sbjct: 71 QFDFFNSIDEVTIALALKSCCGDKLLGSQIHGFAITSGLYSFITVP--NSLMNMYCKSGQ 128
Query: 146 LGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLR 205
HA +F + D D+ SWN ++ G+ ++ +EAL+ +M GV D T+ VL
Sbjct: 129 FTHALCIFETLNDPDIVSWNTVLSGFQRS---EEALNFALKM-NSNGVVFDAVTYTTVLA 184
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C + + G ++H +++ G + +V V NALITMY + G L+ A VF+ M D +S
Sbjct: 185 FCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVS 244
Query: 266 WNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WNA+ISGY + G Y ++ + +FI M + D ++ +S ISA + ++GR+VHG
Sbjct: 245 WNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLS 304
Query: 325 IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
IK G+ VSV N LI Y E+ + VF M ++VVSWTTMIS E + AV
Sbjct: 305 IKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISIDE-----ENAV 359
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ M + P+++T ++ A ++ G +H +++G + N+ I MY
Sbjct: 360 SFFNEMRYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMY 419
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVS 504
+K + +++VF ++ + +I+W ++I G N S EA+I F + KPN T S
Sbjct: 420 AKFGSAEDSMKVFEELNYREIITWNALISGYAQNGLSQEAIITFFSALAESKPNQYTFGS 479
Query: 505 ILSA--CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+LSA A +L G+ HA +++G D + +ALLDMY + G
Sbjct: 480 VLSAIGAAEDISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRG 525
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 214/409 (52%), Gaps = 22/409 (5%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T L++C G D G ++H I G + + V N+L+ MY K G A +F
Sbjct: 79 DEVTIALALKSCCG--DKLLGSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCIF 136
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + D +SWN ++SG+ + E L + M V D +T ++V++ + +
Sbjct: 137 ETLNDPDIVSWNTVLSGFQRSEE---ALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFL 193
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY- 374
G ++H ++K+G +V V N LI MY +G E +VF M++ D+VSW +IS Y
Sbjct: 194 FGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGYT 253
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ + +A+ + M G D ++ S +SAC NL++G ++H L+++ G ++
Sbjct: 254 QAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHV 313
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+ N LI YSKC+ I+ A VF + ++NV+SWT++I N A+ FF +M +
Sbjct: 314 SVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISIDEEN-----AVSFFNEMRYD 368
Query: 495 -LKPNSVTLVSILSACARIGALM-CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
+ PN VT V ++ A IG L+ GK +H ++ G + + + N+ + MY + G +
Sbjct: 369 EVDPNDVTFVGLIHAIT-IGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGSAED 427
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEE----FFRKMIDSKGN 596
+ F N R++ WN L++GYA+ G L++E FF + +SK N
Sbjct: 428 SMKVFEELNYREIITWNALISGYAQNG---LSQEAIITFFSALAESKPN 473
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 17/278 (6%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A+ M I +D + + + C +R + G +H + K V +GN +
Sbjct: 261 EAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLI 320
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE--ALSLYQRMFWVGGVKP 195
S + K + A VF M +R++ SW +I DE A+S + M + V P
Sbjct: 321 STYSKCEIIEDAKLVFQNMLERNVVSWTTMIS-------IDEENAVSFFNEMRY-DEVDP 372
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
+ TF ++ ++ GK VH I+ G+ + V N+ ITMY K G + VF
Sbjct: 373 NDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGSAEDSMKVF 432
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD--PDFMTLSSVISASELVGD 313
+ + R+ I+WNA+ISGY +NG + ++ F L + P+ T SV+SA D
Sbjct: 433 EELNYREIITWNALISGYAQNGLSQEAIITFF---SALAESKPNQYTFGSVLSAIGAAED 489
Query: 314 EKL--GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
L G+ H ++K+GF+ D V + L+ MY G++
Sbjct: 490 ISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRGDK 527
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E A+ + + M+ + ++ V L+ + G +H K+ L + N+F
Sbjct: 356 ENAVSFFNEMRYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSF 415
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++M+ KFG + VF ++ R++ +WN LI GYA+ G EA+ + + KP+
Sbjct: 416 ITMYAKFGSAEDSMKVFEELNYREIITWNALISGYAQNGLSQEAIITF--FSALAESKPN 473
Query: 197 VYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
YTF VL G D LK G+ H +++ G+ +D V +AL+ MY K GD
Sbjct: 474 QYTFGSVLSAIGAAEDISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRGD 526
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 221/417 (52%), Gaps = 8/417 (1%)
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+ P VL+ CG V + GKE+H V++ G + DV V NAL+ MY +C + ARLVFD
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +RD +SW+ MI N E+ L L M + V P + + S+++ + ++G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 318 REVHGYVIKMGFSDDVSV--CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CY 374
+ +H YVI+ ++ + V L+ MY G+ ++F+ + K VVSWT MI+ C
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ L ++ + + M+ E P+EIT+ S++ C G L LG +LH +R G +
Sbjct: 275 RSNRL-EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
+A L+DMY KC I A +F +++V+ WT+++ N +A F +M +
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
++P VT+VS+LS CA GAL GK +H++ + V D L AL+DMY +CG + A
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453
Query: 554 WNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F + RD+ WN ++TG+A G G A + F +M K N +GL C
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 510
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 217/411 (52%), Gaps = 4/411 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H V K V +GNA + M+ + + +A VF KM +RD+ SW+ +I ++
Sbjct: 113 GKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSR 172
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
FD AL L + M ++ V+P ++ +++ GK +H +VIR +
Sbjct: 173 NKEFDMALELIREMNFMQ-VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 231
Query: 234 V--VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
V AL+ MY KCG L AR +F+G+ ++ +SW AMI+G + +G LFI M+E
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE 291
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
+ P+ +T+ S+I G +LG+++H Y+++ GFS +++ L+ MY +
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F +++DV+ WT M+S Y + D+A + M G P ++TI S+LS CA
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
G LDLG +H + + I+ L+DMY+KC I+ A +F + +++ W +I
Sbjct: 412 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471
Query: 472 ILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
I G ++ EAL F +M +KPN +T + +L AC+ G + GK++
Sbjct: 472 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 522
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 5/419 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
++ + L N + AL+ + M + + E A+V++V L G +H+ V +
Sbjct: 164 STMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR 223
Query: 124 TMS--HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ H+ V A L M+ K G LG A +F + + + SW +I G ++ +E
Sbjct: 224 NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGT 283
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
L+ RM + P+ T ++ CG L+ GK++H +++R G+ + + AL+ M
Sbjct: 284 KLFIRM-QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDM 342
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KC D+ AR +FD RD + W AM+S Y + + LF MR V P +T+
Sbjct: 343 YGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTI 402
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
S++S + G LG+ VH Y+ K D + L+ MY G+ ++F S
Sbjct: 403 VSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS 462
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+ W +I+ + ++A++ + ME +G P++IT +L AC+ G + G KL
Sbjct: 463 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 522
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLN 478
+ + T GL+ I ++D+ + +D+A E+ +P K N I W +++ RL+
Sbjct: 523 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 156/284 (54%), Gaps = 5/284 (1%)
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+FM SV+ A V +LG+E+HG+V+K G DV V N L+ MY E VF
Sbjct: 94 NFMA-PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVF 152
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+M +DVVSW+TMI + D A+E + M P E+ + S+++ A N+
Sbjct: 153 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR 212
Query: 417 LGIKLHQLAMRTGLISYIIIANT--LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+G +H +R ++ + T L+DMY+KC + A ++F+ + K V+SWT++I G
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 475 LRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
+NR E +F R N+ PN +T++S++ C GAL GK++HA+ LR G +
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAE 576
L AL+DMY +C ++ A F+S + RDV W +L+ YA+
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQ 376
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 238/489 (48%), Gaps = 16/489 (3%)
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-- 192
A L + L A +F M RD ++ L+ G+A AG F A++L+ R+
Sbjct: 6 ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 65
Query: 193 VKPDVYTFPCVLRTCGGVPD---LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
D + V ++C D L +H +R + V V AL +Y K G L
Sbjct: 66 APADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLG 125
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VFD MP ++ +SW +++ G + L F MR V D ++ ++A
Sbjct: 126 LALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 185
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
G GREVH + K+G V N L +Y + + SRM ++DV +WTT
Sbjct: 186 DAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTT 245
Query: 370 MISCYEGSVLPDKAVETY-QMMEAEGSM---PDEITIASVLSACACLGNLDLGIKLHQLA 425
+IS Y + +A+E + +M+ E S+ P+E T A+V++ACA + + LG +LH A
Sbjct: 246 VISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQA 305
Query: 426 MRTGLISYIIIANTLIDMYSKCK-CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
R G +AN+L+ +Y++ C+ A VF + K+V+SW++II G + +A
Sbjct: 306 ARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDA 365
Query: 485 LIFFRKMMLNL---KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
FR+M + +PN TL S+LS CA +L G+++H A+ G+ + +AL+
Sbjct: 366 FALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALI 425
Query: 542 DMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY + G M A F+ + DV +W ++ GYAE G A E F++M + K +
Sbjct: 426 DMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHV 485
Query: 599 KLMGLFRKC 607
+G+ C
Sbjct: 486 TFIGVLNAC 494
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 247/517 (47%), Gaps = 40/517 (7%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ ++ + SV + A ++ K G LG A VF +M +++ SW L+ +AG
Sbjct: 95 LHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGR 154
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
EAL + M GV D Y + L C L RG+EVH + G ++ V N
Sbjct: 155 RHEALRRFSEMR-ASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVAN 213
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMRE---V 292
L T+Y +C D+ RA M RD +W +IS Y + G + + F+ M+RE V
Sbjct: 214 TLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSV 273
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL-SFGNREE 351
P+ T ++VI+A + LG ++H + GF+ SV N L+ +Y + G
Sbjct: 274 AASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSA 333
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLSAC 409
+ VF KDVVSW+ +IS Y L + A ++ M P+E T+AS+LS C
Sbjct: 334 ADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVC 393
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF-HQIPDKNVISW 468
A +LD G +LH LA+ GL + +I + LIDMY K + A VF H++ D +V+SW
Sbjct: 394 ATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKD-DVVSW 452
Query: 469 TSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
T++I+G + S +AL F++M + LKP+ VT + +L+AC G + G +
Sbjct: 453 TAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQ 512
Query: 528 IGVAFDGFLP-----NALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILLTGYAERGQ 579
I G P ++D+ R GR+ A + +NERD W LL A RG+
Sbjct: 513 I----YGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGE 568
Query: 580 -----------------GALAEEFFRKMIDSKGNWRK 599
GA A + SKG W +
Sbjct: 569 EETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHE 605
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 9/368 (2%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H+ +K + + N +++ + D+ A +M RD+ +W +I Y +
Sbjct: 193 GREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQ 252
Query: 174 AGFFDEALSLYQRMFWVG---GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G EA+ + RM P+ YT+ V+ C + + G+++H R G+
Sbjct: 253 TGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFAC 312
Query: 231 DVDVVNALITMYVKC-GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V N+L+T+Y + G L A VF +D +SW+A+ISGY + G LF M
Sbjct: 313 ARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREM 372
Query: 290 REV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
R P+ TL+S++S GR++H + G + + LI MY G
Sbjct: 373 RHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSG 432
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ + + VFS DVVSWT MI Y KA+E +Q M G PD +T VL+
Sbjct: 433 SMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLN 492
Query: 408 ACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP--DKN 464
AC G ++LG++ L+++ GL ++D+ + I++A E+ +I +++
Sbjct: 493 ACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERD 552
Query: 465 VISWTSII 472
+ WTS++
Sbjct: 553 GVVWTSLL 560
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 247/475 (52%), Gaps = 40/475 (8%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H + ++T+ H + L + + + +A +V + FSWN LI Y G
Sbjct: 15 IHQIHAQTLIH-GLPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGS 73
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L LY +M KP +TFP VL+ C + + G+++H HV+R G+ +D+ V N
Sbjct: 74 PQNSLFLYLKML-RSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCN 132
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM------- 289
+LI MY KC L AR +D M RD +SWN++ISGY + G+ K LF M
Sbjct: 133 SLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVV 192
Query: 290 ----------------------REVL-----VDPDFMTLSSVISASELVGDEKLGREVHG 322
R++L V P+ T+ ++SA + + ++GR +
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPD 381
++ + + LI MY G+ E+ ++F + K++ SW +I+ C +G +L +
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLL-E 311
Query: 382 KAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLI 441
+A++ Y+ M+A+ P+EIT+ +VLSACA LG L+LG ++H R GL +I+A L+
Sbjct: 312 EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALV 371
Query: 442 DMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSV 500
DMY+KC ID A +F + +K+V W ++ILGL + ++L F +M+ ++PN V
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDV 431
Query: 501 TLVSILSACARIGALMCGK-EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
T + +LSAC G + G+ + + A + G++ ++D+ R G +K A+
Sbjct: 432 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAY 486
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 216/450 (48%), Gaps = 57/450 (12%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+LRT L + ++H + G ++ LI ++ + AR V D P
Sbjct: 5 LLRT---ATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSPT 57
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
SWN++I Y +G L L++ M P T V+ A +G G ++H
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 323 YVIKMGFSDDVSVCNPLIKMY-------------------------------LSFGNREE 351
+V+++GF D+ VCN LI MY + +G E+
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 352 GEKVFSRME-SKDVVSWTTMISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+F M ++VV WT MI+ Y EG + ++ ++ A+ P+ T+ +LSA
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 409 CACLGNLDLG------IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD 462
C+ L N ++G I ++++ + T I+ LIDMYSKC ++KA +F +
Sbjct: 238 CSTLCNYEVGRFLSVFIDVNKIPLNT------ILVTALIDMYSKCGDVEKAWRIFDGVSC 291
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEI 521
KN+ SW +II G EA+ +R M ++KPN +TLV++LSACA +GAL G+E+
Sbjct: 292 KNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREV 351
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQG 580
H + R G+ + L AL+DMY +CG++ A F ++E+DV+ WN ++ G A G G
Sbjct: 352 HLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDG 411
Query: 581 ALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
+ F +M+ + + N +G+ C
Sbjct: 412 RDSLAVFSQMVRAGVQPNDVTFIGVLSACN 441
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 189/372 (50%), Gaps = 10/372 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKM-CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ +S +V++G + A +F +M R++ W +I GY K G F E LSL+++M
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222
Query: 193 -VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+P+ T C+L C + + + G+ + V + + +V ALI MY KCGD+ +A
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKA 282
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+FDG+ ++ SWNA+I+G + G + + L+ M+ V P+ +TL +V+SA +
Sbjct: 283 WRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGL 342
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G +LGREVH Y+ + G +V + L+ MY G ++ +F + KDV W MI
Sbjct: 343 GALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMI 402
Query: 372 --SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRT 428
Y G AV + M G P+++T VLSAC G ++ G ++ +A +
Sbjct: 403 LGLAYHGDGRDSLAV--FSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKH 460
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQ--IPDKNVISWTSIILGLRLNNRSFEALI 486
GL + ++D+ + + +A E+ IP ++I W +++ R++ A
Sbjct: 461 GLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSII-WGALLSACRIHRNLELADK 519
Query: 487 FFRKMMLNLKPN 498
+M + PN
Sbjct: 520 ISETIMASQDPN 531
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 150/337 (44%), Gaps = 44/337 (13%)
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM 156
+V L+ C Y+ G +L + L+ L A + M+ K GD+ AW +F +
Sbjct: 230 TMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGV 289
Query: 157 CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRG 216
++L SWN +I G + G +EA+ LY+ M VKP+ T VL C G+ L+ G
Sbjct: 290 SCKNLPSWNAIITGCVQGGLLEEAIDLYRHMK-AQSVKPNEITLVNVLSACAGLGALELG 348
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+EVH+++ R G + +V + AL+ MY KCG + A L+F ++D WNAMI G +
Sbjct: 349 REVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYH 408
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G+ L +F M V P+ +T V+SA C
Sbjct: 409 GDGRDSLAVFSQMVRAGVQPNDVTFIGVLSA----------------------------C 440
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVS-----WTTMISCYEGSVLPDKAVETYQMME 391
N G EEG FS M K +S + M+ + E Y++++
Sbjct: 441 N-------HSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRA---GHLKEAYELVQ 490
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
PD I ++LSAC NL+L K+ + M +
Sbjct: 491 NMLIPPDSIIWGALLSACRIHRNLELADKISETIMAS 527
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 71 CLNGSL-EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
C+ G L E+A+ M+ ++ +E LVN++ C + G +H + + L+
Sbjct: 304 CVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLN 363
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V L A + M+ K G + A +F K ++D+ WN +I G A G ++L+++ +M
Sbjct: 364 VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMV- 422
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGK-EVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
GV+P+ TF VL C ++ G+ + + G ++ ++ + + G L
Sbjct: 423 RAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHL 482
Query: 249 VRA-RLVFDGMPKRDRISWNAMISG 272
A LV + + D I W A++S
Sbjct: 483 KEAYELVQNMLIPPDSIIWGALLSA 507
>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 564
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 262/493 (53%), Gaps = 13/493 (2%)
Query: 102 VRLCEWKRGYDEGLYLH--SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++LC ++ + L +H S+ + S+L +L + + +++K GD+ HA +F ++ R
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNL--QLKDMLIDLYLKQGDVKHARKLFDRISKR 76
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ SW +I +++ G+ +AL L++ M VK + +T+ VL++C + LK G ++
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V + ++ V +AL+++Y +CG + ARL FD M +RD +SWNAMI GY N
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 195
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
LF +M PD T S++ AS +V ++ E+HG IK+GF ++ L
Sbjct: 196 DTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL 255
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPD 398
+ Y+ G+ K+ + +D++S T +I+ + + + A + ++ M + D
Sbjct: 256 VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 315
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVF 457
E+ ++S+L C + ++ +G ++H A+++ I + + + N+LIDMY+K I+ A+ F
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
++ +K+V SWTS+I G + +A+ + +M +KPN VT +S+LSAC+ G
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Query: 517 CGKEIHAHAL-RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDV----SAWNILL 571
G +I+ + + G+ + ++DM R G ++ A+ S E V S W L
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 572 TGYAERGQGALAE 584
G L++
Sbjct: 496 DACRRHGNVQLSK 508
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 199/376 (52%), Gaps = 4/376 (1%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + I G+ +++ + + LI +Y+K GD+ AR +FD + KRD +SW AMIS + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L+LF M V + T SV+ + + +G K G ++HG V K + ++ V +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ +Y G EE F M+ +D+VSW MI Y + D + +Q+M EG PD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T S+L A + L++ +LH LA++ G + +L++ Y KC + A ++
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 459 QIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
++++S T++I G + NN + +A F+ M+ + K + V + S+L C I ++
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVT 333
Query: 517 CGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G++IH AL+ + FD L N+L+DMY + G ++ A F E+DV +W L+ GY
Sbjct: 334 IGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGY 393
Query: 575 AERGQGALAEEFFRKM 590
G A + + +M
Sbjct: 394 GRHGNFEKAIDLYNRM 409
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 206/407 (50%), Gaps = 14/407 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG+ +H V K ++ + +A LS++ + G + A F M +RDL SWN +I GY
Sbjct: 131 EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT 190
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
D + SL+Q M G KPD +TF +LR V L+ E+H I+ G+
Sbjct: 191 ANACADTSFSLFQLML-TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS 249
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF-ENGEYMKGLMLFIMMRE 291
++ +L+ YVKCG L A + +G KRD +S A+I+G+ +N +F M
Sbjct: 250 ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 309
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNRE 350
+ D + +SS++ + +GR++HG+ +K DV++ N LI MY G E
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ F M+ KDV SWT++I+ Y +KA++ Y ME E P+++T S+LSAC+
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACS 429
Query: 411 CLGNLDLGIKLHQLAM-RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
G +LG K++ + + G+ + + +IDM ++ +++A + + ++S +
Sbjct: 430 HTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR--SKEGIVSLS 487
Query: 470 SIILGLRLNNRSFEALIFFRKM----MLNLKP----NSVTLVSILSA 508
S G L+ + K+ +L+++P N + L S+ +A
Sbjct: 488 SSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA 534
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ G S + + + LID+Y K + A ++F +I ++V+SWT++I
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+AL+ F++M ++K N T S+L +C +G L G +IH + A + + +A
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
LL +Y RCG+M+ A QF+S ERD+ +WN ++ GY + F+ M+
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 276/583 (47%), Gaps = 55/583 (9%)
Query: 20 NPKTRIPET---SFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSL 76
+P IP S KP ++H Q LN +TS R++ LC NG +
Sbjct: 4 SPFNTIPSKLPYSVSTKPSSKHHDD------QALNPSSTSYF------HRVSSLCKNGEI 51
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL + M N+ + + +++ C ++R G +H+ + K + GN +
Sbjct: 52 KEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYA---GNEY 108
Query: 137 LS-----MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ + K L A +F K+ R++FSW +IG + G + AL + M
Sbjct: 109 IETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE-N 167
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ PD + P V + CG + + G+ VH +V++ G E V V ++L MY KCG L A
Sbjct: 168 EIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD +P+R+ ++WNA++ GY +NG + + L MR+ V+P +T+S+ +SAS +
Sbjct: 228 RKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANM 287
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G G++ H I G D + L+ Y G E E +F RM KDVV+W +I
Sbjct: 288 GGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLI 347
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y L + A+ Q+M E D +T+++++SA A NL G ++ +R L
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLE 407
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S I++A+ +DMY+KC I A +VF +K++I W +++ + S EAL F +M
Sbjct: 408 SDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEM 467
Query: 492 ML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
L ++ PN +T I+ + R G + KE+ G++ PN +
Sbjct: 468 QLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGIS-----PNLI---------- 512
Query: 551 KPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+W ++ G + G A F RKM DS
Sbjct: 513 ---------------SWTTMMNGMVQNGCSEEAILFLRKMQDS 540
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 250/532 (46%), Gaps = 49/532 (9%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC---EWKRGYDEGLYLHSVVSKTMSH 127
C G E AL M E I D + N+ + C +W R G +H V K
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRF---GRGVHGYVVKAGLE 205
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
V + ++ M+ K G L A VF ++ +R++ +WN L+ GY + G +EA+ L M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDM 265
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GV+P T L + + GK+ H I G E D + +L+ Y K G
Sbjct: 266 -RKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGL 324
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A ++FD M +D ++WN +ISGY + G + + +MR + D +TLS+++SA
Sbjct: 325 IEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSA 384
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + K G+EV Y I+ D+ + + + MY G+ + +KVF KD++ W
Sbjct: 385 AARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+++ Y S L +A+ + M+ E P+ IT ++ L L +R
Sbjct: 445 NTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLII--------LSL--------LR 488
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK----NVISWTSIILGLRLNNRSFE 483
G +++A E+F Q+ N+ISWT+++ G+ N S E
Sbjct: 489 NGE-------------------VNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEE 529
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALL 541
A++F RKM L+PN+ ++ LSA A + +L G+ IH + +R + + + +L+
Sbjct: 530 AILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLV 589
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
DMY +CG + A F S ++ +N +++ YA G A +R + D
Sbjct: 590 DMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLED 641
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 214/455 (47%), Gaps = 42/455 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+A++ L M++ + + + G EG H++ L L
Sbjct: 252 NGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNIL 311
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G + L+ + K G + +A +F +M D+D+ +WN+LI GY + G ++A+ + Q M +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLM-RLEN 370
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+K D T ++ +LK GKEV + IR E+D+ + + + MY KCG +V A+
Sbjct: 371 LKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAK 430
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD ++D I WN +++ Y E+G + L LF M+ V P+ +T
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITW----------- 479
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK----DVVSWT 368
N +I L G E +++F +M+S +++SWT
Sbjct: 480 ------------------------NLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWT 515
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM++ + ++A+ + M+ G P+ +I LSA A L +L G +H +R
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRN 575
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
S + I +L+DMY+KC I+KA VF + + ++I L EA+
Sbjct: 576 LQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITL 635
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+R + + KP+++T S+LSAC +G + EI
Sbjct: 636 YRSLEDMGNKPDNITFTSLLSACNHVGDINQAIEI 670
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKM----CDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
N + ++ G++ A +F +M +L SW ++ G + G +EA+ L+ R
Sbjct: 480 NLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQ 538
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDL 248
G++P+ ++ L + L G+ +H +++R + + V + +L+ MY KCGD+
Sbjct: 539 DSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDI 598
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
+A VF + +NAMIS Y G + + L+ + ++ PD +T +S++SA
Sbjct: 599 NKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSAC 658
Query: 309 ELVGDEKLGREVH-GYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
VGD E+ V K G + ++ + S G + K+ M K
Sbjct: 659 NHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMPYK 713
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 256/495 (51%), Gaps = 16/495 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLV----RLCEWKRGYDEGLYLHSVVSKT-MSHLSVR 131
E A K M++L + ++ D+ V L+ + G +G +H+ V +T ++ V
Sbjct: 838 EAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVA 896
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN ++M+ K G + A VF M ++D SWN LI G + ++A + RM G
Sbjct: 897 IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTG 956
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
+ P +T L +C + + G+++H ++ G + DV V NAL+ +Y + G
Sbjct: 957 SM-PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTEC 1015
Query: 252 RLVFDGMPKRDRISWNAMISGYFEN-GEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
VF MP+ D++SWN++I ++ + + F+ M +T +++SA
Sbjct: 1016 LKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSS 1075
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTT 369
+ ++ ++H V+K SDD ++ N L+ Y G E EK+F+RM E++D VSW +
Sbjct: 1076 LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNS 1135
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
MIS Y + L KA++ M +G D T A+VLSACA + L+ G+++H +R
Sbjct: 1136 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRAC 1195
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ S +++ + L+DMYSKC ID A F +P +NV SW S+I G + +AL F
Sbjct: 1196 MESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 1255
Query: 490 KMMLNLKP--NSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNALLDMY 544
+MML+ +P + L+ +LSAC+ +G + G E + R+ + F + ++D+
Sbjct: 1256 RMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHF--SCMVDLL 1313
Query: 545 VRCGRMKPAWNQFNS 559
R G++ + NS
Sbjct: 1314 GRAGKLDEVGDFINS 1328
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 251/489 (51%), Gaps = 16/489 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A +S F +FG A +F +M R++ S N L+ G K + A ++ M +
Sbjct: 792 VGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLV 851
Query: 192 GVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEAD-VDVVNALITMYVKCGDL 248
G+ D Y + V + ++G+EVH HVIR G + V + N L+ MY K G +
Sbjct: 852 GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 911
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A VF+ M ++D +SWN++ISG +N F+ MR P TL S +S+
Sbjct: 912 ADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSC 971
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G LG ++H +K+G DVSV N L+ +Y G E KVFS M D VSW
Sbjct: 972 ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 1031
Query: 369 TMI---SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
++I S E SV +AV+ + M G +T ++LSA + L ++ ++H L
Sbjct: 1032 SVIGALSDSEASV--SQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 1089
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEA 484
++ L I N L+ Y KC +++ ++F ++ + ++ +SW S+I G N +A
Sbjct: 1090 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 1149
Query: 485 --LIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L++F M + +S T ++LSACA + L G E+HA +R + D + +AL+D
Sbjct: 1150 MDLVWFM-MQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVD 1208
Query: 543 MYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF-RKMIDSK--GNWR 598
MY +CGR+ A F R+V +WN +++GYA G G A + F R M+D + +
Sbjct: 1209 MYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVA 1268
Query: 599 KLMGLFRKC 607
L+G+ C
Sbjct: 1269 PLLGVLSAC 1277
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 259/518 (50%), Gaps = 16/518 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWK--RGYDEGLYLHSVVSKTMSHLSV 130
NG ++A M + A + +R C+ G G+ +H ++SKT V
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 131 RLGNAFLSMFVKFGDLGH-AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ N +SM+ D + A VF ++ R+ SWN +I Y++ G A L+ M
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742
Query: 190 VG---GVKPDVYTFPCVLRTCGGVPD--LKRGKEVHVHVIRFGYEADVDVVNALITMYVK 244
G KP+ YTF ++ D L +++ V + G+ D+ V +AL++ + +
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802
Query: 245 CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---VDPDFMTL 301
G A+ +F+ M R+ +S N ++ G + + +F M++++ D + L
Sbjct: 803 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLL 862
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDD-VSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+ S L + GREVH +VI+ G +D+ V++ N L+ MY G + VF M
Sbjct: 863 SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 922
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD VSW ++IS + + + A E++ M GSMP T+ S LS+CA LG + LG +
Sbjct: 923 EKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQ 982
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ GL + + ++N L+ +Y++ C + L+VF +P+ + +SW S+I L +
Sbjct: 983 IHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEA 1042
Query: 481 SF-EALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
S +A+ +F +MM + VT ++ILSA + + +IHA L+ ++ D + N
Sbjct: 1043 SVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 1102
Query: 539 ALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGY 574
ALL Y +CG M F S RD +WN +++GY
Sbjct: 1103 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 1140
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 248/484 (51%), Gaps = 23/484 (4%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N ++++V+ GDLG A +F +M +R+L +W LI GY + G DEA + ++ M G
Sbjct: 581 LSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAG 640
Query: 192 GVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
+ P+ Y F LR C G K G ++H + + Y +DV V N LI+MY C D
Sbjct: 641 FI-PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 699
Query: 250 R-ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVL---VDPDFMTLSSV 304
AR VFD + R+ ISWN++IS Y G+ + LF M +E L P+ T S+
Sbjct: 700 NDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSL 759
Query: 305 ISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
I+A+ D L ++ V K GF D+ V + L+ + FG ++ + +F +M +
Sbjct: 760 ITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVR 819
Query: 363 DVVSWTTMISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIK- 420
+VVS ++ + A + + +M + G D + +LSA + L+ G +
Sbjct: 820 NVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRK 877
Query: 421 ---LHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+H +RTGL + + I N L++MY+K I A VF + +K+ +SW S+I GL
Sbjct: 878 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 937
Query: 477 LNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
N S +A F R P++ TL+S LS+CA +G +M G++IH L++G+ D
Sbjct: 938 QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 997
Query: 536 LPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAE-RGQGALAEEFFRKMIDS 593
+ NALL +Y G F+ E D +WN ++ ++ + A ++F +M+
Sbjct: 998 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMM-- 1055
Query: 594 KGNW 597
+G W
Sbjct: 1056 RGGW 1059
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 206/409 (50%), Gaps = 19/409 (4%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF ++ G + +E+H+ I++G+ ++ + N LI +YV+ GDL A+ +FD M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KL 316
R+ ++W +ISGY +NG+ + F M P+ S + A + G KL
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLS-FGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G ++HG + K + DV VCN LI MY S + + VF R+ ++ +SW ++IS Y
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 376 GSVLPDKAVETYQMMEAEG----SMPDEITIASVLSACACLGNLDLGI-KLHQLAMR--- 427
A + + M+ EG P+E T S+++A AC ++D G+ L Q+ R
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA-AC-SSVDFGLCVLEQMLARVEK 783
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G + + + + L+ +++ D A +F Q+ +NV+S +++GL + A
Sbjct: 784 SGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 843
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGAL----MCGKEIHAHALRIGVAFDGF-LPNALLD 542
F +M + NS + V +LSA + L G+E+HAH +R G+ + + N L++
Sbjct: 844 FHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 903
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY + G + A + F E+D +WN L++G + A E F +M
Sbjct: 904 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRM 952
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
RE+H IK GF ++ + N LI +Y+ G+ +K+F M ++++V+W +IS Y
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG--NLDLGIKLHQLAMRTGLISYI 434
+ PD+A ++ M G +P+ S L AC G LG+++H L +T S +
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 435 IIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
++ N LI MY C + A VF +I +N ISW SII A F M
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742
Query: 493 ----LNLKPNSVTLVSILS-ACARIGALMCG-KEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ KPN T S+++ AC+ + +C +++ A + G D ++ +AL+ + R
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
G A N F R+V + N L+ G ++ QG A + F +M D G
Sbjct: 803 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG 852
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N L +A+ + M + +D ++ C + G+ +H+ +
Sbjct: 1134 NSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIR 1193
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G+A + M+ K G + +A F M R+++SWN +I GYA+ G ++AL L
Sbjct: 1194 ACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 1253
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
+ RM G V VL C V ++ G E
Sbjct: 1254 FTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE 1288
>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
Length = 565
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 262/493 (53%), Gaps = 13/493 (2%)
Query: 102 VRLCEWKRGYDEGLYLH--SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR 159
++LC ++ + L +H S+ + S+L +L + + +++K GD+ HA +F ++ R
Sbjct: 20 LKLCSYQNVKKQLLLIHGNSITNGFCSNL--QLKDMLIDLYLKQGDVKHARKLFDRISKR 77
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
D+ SW +I +++ G+ +AL L++ M VK + +T+ VL++C + LK G ++
Sbjct: 78 DVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQI 136
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H V + ++ V +AL+++Y +CG + ARL FD M +RD +SWNAMI GY N
Sbjct: 137 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 196
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
LF +M PD T S++ AS +V ++ E+HG IK+GF ++ L
Sbjct: 197 DTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL 256
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPD 398
+ Y+ G+ K+ + +D++S T +I+ + + + A + ++ M + D
Sbjct: 257 VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 316
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVF 457
E+ ++S+L C + ++ +G ++H A+++ I + + + N+LIDMY+K I+ A+ F
Sbjct: 317 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 376
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALM 516
++ +K+V SWTS+I G + +A+ + +M +KPN VT +S+LSAC+ G
Sbjct: 377 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 436
Query: 517 CGKEIHAHAL-RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDV----SAWNILL 571
G +I+ + + G+ + ++DM R G ++ A+ S E V S W L
Sbjct: 437 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 496
Query: 572 TGYAERGQGALAE 584
G L++
Sbjct: 497 DACRRHGNVQLSK 509
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 199/376 (52%), Gaps = 4/376 (1%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H + I G+ +++ + + LI +Y+K GD+ AR +FD + KRD +SW AMIS + G
Sbjct: 35 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 94
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+ L+LF M V + T SV+ + + +G K G ++HG V K + ++ V +
Sbjct: 95 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 154
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ +Y G EE F M+ +D+VSW MI Y + D + +Q+M EG PD
Sbjct: 155 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 214
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T S+L A + L++ +LH LA++ G + +L++ Y KC + A ++
Sbjct: 215 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 274
Query: 459 QIPDKNVISWTSIILGL-RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALM 516
++++S T++I G + NN + +A F+ M+ + K + V + S+L C I ++
Sbjct: 275 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVT 334
Query: 517 CGKEIHAHALRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G++IH AL+ + FD L N+L+DMY + G ++ A F E+DV +W L+ GY
Sbjct: 335 IGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGY 394
Query: 575 AERGQGALAEEFFRKM 590
G A + + +M
Sbjct: 395 GRHGNFEKAIDLYNRM 410
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 206/407 (50%), Gaps = 14/407 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG+ +H V K ++ + +A LS++ + G + A F M +RDL SWN +I GY
Sbjct: 132 EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT 191
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
D + SL+Q M G KPD +TF +LR V L+ E+H I+ G+
Sbjct: 192 ANACADTSFSLFQLML-TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS 250
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF-ENGEYMKGLMLFIMMRE 291
++ +L+ YVKCG L A + +G KRD +S A+I+G+ +N +F M
Sbjct: 251 ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 310
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNRE 350
+ D + +SS++ + +GR++HG+ +K DV++ N LI MY G E
Sbjct: 311 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 370
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ F M+ KDV SWT++I+ Y +KA++ Y ME E P+++T S+LSAC+
Sbjct: 371 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACS 430
Query: 411 CLGNLDLGIKLHQLAM-RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
G +LG K++ + + G+ + + +IDM ++ +++A + + ++S +
Sbjct: 431 HTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR--SKEGIVSLS 488
Query: 470 SIILGLRLNNRSFEALIFFRKM----MLNLKP----NSVTLVSILSA 508
S G L+ + K+ +L+++P N + L S+ +A
Sbjct: 489 SSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA 535
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
+H ++ G S + + + LID+Y K + A ++F +I ++V+SWT++I
Sbjct: 35 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 94
Query: 481 SFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+AL+ F++M ++K N T S+L +C +G L G +IH + A + + +A
Sbjct: 95 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 154
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
LL +Y RCG+M+ A QF+S ERD+ +WN ++ GY + F+ M+
Sbjct: 155 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 207
>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 767
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 247/523 (47%), Gaps = 64/523 (12%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N +S F G + A +F KM +RD SWN ++ GY G + + ++ M
Sbjct: 64 NTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRDCCC 123
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD ++F CV++ G + LK ++H +F + D V +++ MY+KCG + A+
Sbjct: 124 VPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQK 183
Query: 254 VF-------------------------------DGMPKRDRISWNAMISGYFENGEYMKG 282
VF MP+RD +SWN MIS ++G +
Sbjct: 184 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 243
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
L F+ M P+ MT +SV+SA + D + G +H +++M DV LI M
Sbjct: 244 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDM 303
Query: 343 YLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITI 402
Y G E +VF + + VSWT++I + ++A+ + M D+ T+
Sbjct: 304 YAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTL 363
Query: 403 ASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC--------------- 447
A+VL C ++ +G +LH + GL S + +AN L+ MY+KC
Sbjct: 364 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 423
Query: 448 ----------------KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
++KA E F ++P++NVISW S++ E L + +M
Sbjct: 424 RDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 483
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ +K + +T + +SACA + L+ G +I A A ++G + + + N+++ MY RCG++
Sbjct: 484 LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQI 543
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ A F+S +++ +WN ++ GYA+ GQG E F KM++
Sbjct: 544 EEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLN 586
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 240/522 (45%), Gaps = 64/522 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDE-GLYLHSVVS 122
NS ++ NG LE +K SM CV + + V GY + L LH
Sbjct: 95 NSMMSGYFHNGELEATIKVFVSMVRDCCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAE 154
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
K + + + L M++K G + A VF + + LF WN +I GY+K G +AL
Sbjct: 155 KFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALE 214
Query: 183 LYQRM------------------------------FWVGGVKPDVYTFPCVLRTCGGVPD 212
L+ +M W G +P+ T+ VL C + D
Sbjct: 215 LFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYD 274
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ G +H ++R DV LI MY KCG L AR VFDG+ + + +SW ++I G
Sbjct: 275 LEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGG 334
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ G + L+LF MREV V D TL++V+ D +G ++H + I G
Sbjct: 335 VAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSS 394
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE--GSV---------LPD 381
V V N L+ MY G+ + F M +D++SWT MI+ + G V +P+
Sbjct: 395 VPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPE 454
Query: 382 KAVETYQMMEA--------------------EGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V ++ M A EG D IT ++ +SACA L L LG ++
Sbjct: 455 RNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQI 514
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
A + G S + +AN+++ MYS+C I++A ++F I KN++SW +++ G N +
Sbjct: 515 LAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQG 574
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILS-ACARIGALMCGKEI 521
+ + F KM+ + P+ ++ VS+LS R G L K +
Sbjct: 575 RKVIEIFEKMLNIGNVPDQISYVSVLSDLLGRAGQLEQAKNL 616
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 206/452 (45%), Gaps = 65/452 (14%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
++ C + + +++H +I G ++ + + N L+ MY CG + A VF G+ +
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60
Query: 264 ISWNAMI-------------------------------SGYFENGEYMKGLMLFI-MMRE 291
SWN MI SGYF NGE + +F+ M+R+
Sbjct: 61 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
PD + S V+ AS +G KL ++HG+ K F D V ++ MY+ G +
Sbjct: 121 CCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 180
Query: 352 GEKVFSR-------------------------------MESKDVVSWTTMISCYEGSVLP 380
+KVF R M +D VSW TMIS
Sbjct: 181 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 240
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+ + T+ M +G P+ +T ASVLSAC + +L+ G LH +R + L
Sbjct: 241 AETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGL 300
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNS 499
IDMY+KC ++ A +VF + + N +SWTS+I G+ EAL+ F +M + + +
Sbjct: 301 IDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQ 360
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
TL ++L C + G+++HAH + G+ + NAL+ MY +CG + A + F
Sbjct: 361 FTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFEL 420
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKM 590
RD+ +W ++T +++ G A E+F KM
Sbjct: 421 MPIRDIISWTAMITAFSQAGDVEKAREYFDKM 452
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 149/311 (47%), Gaps = 34/311 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+AL + M+E+ + D+ L ++ +C ++ G LH+ SV +
Sbjct: 339 GFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVA 398
Query: 134 NAFLSMFVKFGDL---GHAWYV----------------------------FGKMCDRDLF 162
NA ++M+ K GD+ HA+ + F KM +R++
Sbjct: 399 NALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVI 458
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN ++ Y + G+++E L +Y +M GVK D TF + C + L G ++
Sbjct: 459 SWNSMLATYMQRGYWEEGLKVYIQML-REGVKTDWITFSTSISACADLAVLILGNQILAQ 517
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ G+ ++V V N+++TMY +CG + A+ +F + ++ +SWNAM++GY +NG+ K
Sbjct: 518 AEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKV 577
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ +F M + PD ++ SV+ S+L+G + + +M F + ++ L+
Sbjct: 578 IEIFEKMLNIGNVPDQISYVSVL--SDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 635
Query: 343 YLSFGNREEGE 353
GN + E
Sbjct: 636 CRIHGNTKLAE 646
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNV 465
+ CA L ++ + KLH + GL S I + N L++MYS C I A VF I NV
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60
Query: 466 ISWTSIILGLRLNNRSFEALIFFRKM----------MLN--------------------- 494
SW ++I G + + EA F KM M++
Sbjct: 61 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120
Query: 495 --LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
P+ + ++ A +G L ++H A + D + ++LDMY++CG M
Sbjct: 121 CCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 180
Query: 553 AWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG-NWRKLMGLFRK 606
A F + + WN ++ GY++ G A E F KM + +W ++ + +
Sbjct: 181 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQ 236
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 229/479 (47%), Gaps = 50/479 (10%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGH--------------------AWYVFGKMCDRD 160
V TM +V L N +S + K GD A +F K+CDRD
Sbjct: 18 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRD 77
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ SWN +I GY G + L +Y++M ++G + D+ T VL C L GK VH
Sbjct: 78 VISWNSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCAKSGTLSLGKAVH 136
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
I+ +E ++ N L+ MY KCGDL A VF+ M +R+ +SW +MI+GY +G
Sbjct: 137 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSD 196
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
++L M + V D + ++S++ A G G++VH Y+ + ++ VCN L+
Sbjct: 197 GAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALM 256
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY G+ E VFS M KD++SW TM+ + PD
Sbjct: 257 DMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK---------------------PDSR 295
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T+A +L ACA L L+ G ++H +R G S +AN L+D+Y KC + A +F I
Sbjct: 296 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 355
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
P K+++SWT +I G ++ EA+ F +M ++P+ V+ +SIL AC+ G L G
Sbjct: 356 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 415
Query: 520 E---IHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTG 573
I + I + + ++D+ R G + A+ + D + W LL G
Sbjct: 416 RFFYIMKNDFNIEPKLEHYA--CMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 204/409 (49%), Gaps = 48/409 (11%)
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR--------------- 250
TCG DLK G+ V + + +V + N +++ Y K GD
Sbjct: 8 TCG---DLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 251 -----ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
A +FD + RD ISWN+MISGY NG +GL ++ M + +D D T+ SV+
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
G LG+ VH IK F ++ N L+ MY G+ + +VF +M ++VV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWT+MI+ Y D A+ Q ME EG D + I S+L ACA G+LD G +H
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
+ S + + N L+DMY+KC ++ A VF + K++ISW +
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNT--------------- 285
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
M+ LKP+S T+ IL ACA + AL GKEIH + LR G + D + NAL+D+YV
Sbjct: 286 -----MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 340
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+CG + A F+ +D+ +W +++ GY G G A F +M D+
Sbjct: 341 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 389
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 201/420 (47%), Gaps = 32/420 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG E+ L M L I VD +++++ C G +HS+ K
Sbjct: 82 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIK 141
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N L M+ K GDL A VF KM +R++ SW +I GY + G+ D A+ L
Sbjct: 142 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 201
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Q+M GVK DV +L C L GK+VH ++ +++ V NAL+ MY
Sbjct: 202 LQQM-EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 260
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF M +D ISWN M+ GE + PD T++
Sbjct: 261 KCGSMEGANSVFSTMVVKDIISWNTMV------GE---------------LKPDSRTMAC 299
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ A + + G+E+HGY+++ G+S D V N L+ +Y+ G +F + SKD
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG----- 418
+VSWT MI+ Y ++A+ T+ M G PDE++ S+L AC+ G L+ G
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 419
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
I + + L Y ++D+ S+ + KA + +P + W +++ G R+
Sbjct: 420 IMKNDFNIEPKLEHYA----CMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 475
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 245/478 (51%), Gaps = 23/478 (4%)
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVF-GKMCDRDLFSWNVLIGGYAKAGFFD 178
+V+ HL + + ++M+ + + A VF +R++F++N +I G+ G
Sbjct: 1 MVTSGFIHLPSSI-TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAA 59
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+ Y+RM VG V PD +TFPCV+R C ++++ +H + + G E +V V +AL
Sbjct: 60 DGFQFYKRMRSVG-VMPDKFTFPCVVRACCEFMEVRK---IHGCLFKMGLELNVFVGSAL 115
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y+K A VF+ +P+RD + WNAMI+GY + G K +++F M E +
Sbjct: 116 VNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSR 175
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T +S++S +GD GR +HG V KMG+S V+V N LI MY + E+ +F
Sbjct: 176 FTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEM 235
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
+ KD+ SW ++IS +E D + + M +PD ITI +VL AC+ L L G
Sbjct: 236 INEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHG 295
Query: 419 IKLHQLAMRTGLISY-----IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++H + GL +++ N ++DMY+KC C+ A +F + +K+V SW +I+
Sbjct: 296 REIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIM 355
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G ++ EAL F +M +KP+ VT V +LSAC+ G + G+ R+ + F
Sbjct: 356 GYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSF---LTRMELEF 412
Query: 533 DGFLP-----NALLDMYVRCGRMKPAWN--QFNSNERDVSAWNILLTGYAERGQGALA 583
G +P ++DM R G + A++ Q E ++ W LL G L
Sbjct: 413 -GVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELG 469
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 204/384 (53%), Gaps = 13/384 (3%)
Query: 235 VNALITMYVKCGDLVRARLVF-DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ +LI MY +C + A LVF D +R+ ++NA+I+G+ NG G + MR V
Sbjct: 13 ITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVG 72
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD T V+ A + R++HG + KMG +V V + L+ YL E+ E
Sbjct: 73 VMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAE 129
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + +DVV W MI+ Y +KAV ++ M EG T S+LS +G
Sbjct: 130 KVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMG 189
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+++ G +H + + G S + ++N LIDMY KCK + AL +F I +K++ SW SII
Sbjct: 190 DINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIIS 249
Query: 474 GLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ L F KM+ + + P+ +T+ ++L AC+ + ALM G+EIH + + G+
Sbjct: 250 AHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGK 309
Query: 533 -----DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEF 586
D L NA++DMY +CG MK A F+ +DV++WNI++ GYA G G A +
Sbjct: 310 NENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDM 369
Query: 587 FRKMIDS--KGNWRKLMGLFRKCQ 608
F +M ++ K + +G+ C
Sbjct: 370 FHRMCEAQIKPDVVTFVGVLSACS 393
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 211/425 (49%), Gaps = 11/425 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++ M+ + + D+ +VR C + E +H + K
Sbjct: 46 NAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRAC---CEFMEVRKIHGCLFK 102
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L+V +G+A ++ ++K A VF ++ +RD+ WN +I GY K G ++A+ +
Sbjct: 103 MGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVV 162
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM G+ +T +L + D+ G+ +H V + GY + V V NALI MY
Sbjct: 163 FKRM-GEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYG 221
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC A ++F+ + ++D SWN++IS + + ++ L LF M V PD +T+++
Sbjct: 222 KCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITA 281
Query: 304 VISASELVGDEKLGREVHGYVIKMGF-----SDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
V+ A + GRE+HGY+I G DDV + N ++ MY G + + +F
Sbjct: 282 VLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDL 341
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
M +KDV SW MI Y +A++ + M PD +T VLSAC+ G + G
Sbjct: 342 MRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQG 401
Query: 419 IK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLR 476
L ++ + G+I I +IDM + + +A ++ +IP + N+I W +++ R
Sbjct: 402 RSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACR 461
Query: 477 LNNRS 481
L+ +
Sbjct: 462 LHGNA 466
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQ-IPDKNVISWTSIILGLRLNNRSFEALI 486
+G I +LI+MYS+C +++A+ VF ++NV ++ +II G N + +
Sbjct: 4 SGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQ 63
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F+++M + + P+ T ++ AC M ++IH ++G+ + F+ +AL++ Y+
Sbjct: 64 FYKRMRSVGVMPDKFTFPCVVRACCE---FMEVRKIHGCLFKMGLELNVFVGSALVNTYL 120
Query: 546 RCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ + A F ERDV WN ++ GY + G A F++M
Sbjct: 121 KVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRM 166
>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
Length = 829
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 232/442 (52%), Gaps = 11/442 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
MF + GD+ AW VF ++ WN +I GY + G F EA+ L R+ V DV
Sbjct: 290 MFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVV 349
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV--NALITMYVKCGDLVRARLVFD 256
TF L D + G+++H ++I+ G + V+ NAL+ MY +CG++ A +FD
Sbjct: 350 TFLSALTAASQSQDGRLGQQLHGYLIK-GMHTTLPVILGNALVVMYSRCGNVQTAFELFD 408
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ ++D +SWN MI+ + +N ++GL+L M++ D +TL++V+SA+ GD +
Sbjct: 409 RLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHI 468
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISCY 374
G++ H Y+I+ G + + + LI MY G E ++VF +D V+W MI+ Y
Sbjct: 469 GKQAHSYLIRHGIEGE-GLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGY 527
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL-GNLDLGIKLHQLAMRTGLISY 433
+ P++A+ ++ M P +T+ASVL AC L G L G ++H A+R L +
Sbjct: 528 TQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTN 587
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + L+DMYSKC I A VF + +K+ +S+T++I GL + AL F M
Sbjct: 588 VFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQE 647
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
LKP+ VT ++ +SAC G + G ++ GV ++DM + GR++
Sbjct: 648 KGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCIVDMLAKAGRVEE 707
Query: 553 AWN--QFNSNERD-VSAWNILL 571
A+ Q E D VS W LL
Sbjct: 708 AYEFVQELGEEGDFVSIWGTLL 729
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 240/452 (53%), Gaps = 20/452 (4%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD----VYTFPCVLRTC 207
+F M R+ SWN L G Y K G EAL ++ RM G+KP V FP V +
Sbjct: 201 LFDAMPKRNAVSWNTLFGWYVKTGRPQEALEMFVRML-EDGIKPTPVSFVNVFPAVAK-- 257
Query: 208 GGVPDLKRGKEVHVHVIRFG--YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
D ++ +++ G Y D+ VV++ I M+ + GD+ A VF+ K++
Sbjct: 258 ---EDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEV 314
Query: 266 WNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYV 324
WN MI+GY +NG++ + + L I +M V D +T S ++A+ D +LG+++HGY+
Sbjct: 315 WNTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYL 374
Query: 325 IK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
IK M + V + N L+ MY GN + ++F R+ KD+VSW TMI+ + + +
Sbjct: 375 IKGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEG 434
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ M+ G D +T+ +VLSA + G+L +G + H +R G I + + LIDM
Sbjct: 435 LLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHG-IEGEGLESYLIDM 493
Query: 444 YSKCKCIDKALEVFHQIPD--KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSV 500
Y+K I+ A VF + ++ ++W ++I G +A++ FR M+ L+P SV
Sbjct: 494 YAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSV 553
Query: 501 TLVSILSACARIGALMC-GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-N 558
TL S+L AC +G +C GK+IH ALR + + F+ AL+DMY +CG + A + F +
Sbjct: 554 TLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAD 613
Query: 559 SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
E+ ++ +++G + G G A F M
Sbjct: 614 MTEKSTVSYTTMISGLGQHGFGKSALSLFYSM 645
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 222/450 (49%), Gaps = 24/450 (5%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP--DVYTFPCVLRTCGGVPDLKRGKEVHV 221
+N L+ Y + AL LY + P D YT+ C L C L+ GK VH
Sbjct: 101 YNALLIAYVARALPEHALRLYALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHA 160
Query: 222 HVIRFGYE-ADVDVV-NALITMYVKC------GDLVRARLVFDGMPKRDRISWNAMISGY 273
H++R D V+ N+L+ +Y C G + R +FD MPKR+ +SWN + Y
Sbjct: 161 HLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGWY 220
Query: 274 FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG--FSD 331
+ G + L +F+ M E + P ++ +V A D ++G ++K G + +
Sbjct: 221 VKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVA-KEDPSWSFVLYGLLVKHGMEYVN 279
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMM 390
D+ V + I M+ G+ + +VF K+ W TMI+ Y + + ++M
Sbjct: 280 DLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRLM 339
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQL---AMRTGLISYIIIANTLIDMYSKC 447
++ D +T S L+A + + LG +LH M T L +I+ N L+ MYS+C
Sbjct: 340 VSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKGMHTTLP--VILGNALVVMYSRC 397
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSIL 506
+ A E+F ++ +K+++SW ++I N+ E L+ +M + + VTL ++L
Sbjct: 398 GNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVL 457
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA---WNQFNSNERD 563
SA + G L GK+ H++ +R G+ +G L + L+DMY + GR++ A ++ + + +RD
Sbjct: 458 SAASNTGDLHIGKQAHSYLIRHGIEGEG-LESYLIDMYAKSGRIEIAQRVFDDYGNAKRD 516
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDS 593
WN ++ GY + G A FR MI++
Sbjct: 517 EVTWNAMIAGYTQTGHPEQAILAFRAMIEA 546
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 192/373 (51%), Gaps = 8/373 (2%)
Query: 114 GLYLHSVVSKTM-SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G LH + K M + L V LGNA + M+ + G++ A+ +F ++ ++D+ SWN +I +
Sbjct: 367 GQQLHGYLIKGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFV 426
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ F E L L +M G D+ T VL DL GK+ H ++IR G E +
Sbjct: 427 QNDFDLEGLLLVYQM-QKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGE- 484
Query: 233 DVVNALITMYVKCGDLVRARLVFD--GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ + LI MY K G + A+ VFD G KRD ++WNAMI+GY + G + ++ F M
Sbjct: 485 GLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMI 544
Query: 291 EVLVDPDFMTLSSVISASE-LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E ++P +TL+SV+ A + L G G+++H + ++ +V V L+ MY G
Sbjct: 545 EACLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEI 604
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E VF+ M K VS+TTMIS A+ + M+ +G PD +T + +SAC
Sbjct: 605 STAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISAC 664
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN--VIS 467
G +D G+ L++ G++ ++DM +K +++A E ++ ++ V
Sbjct: 665 NYSGLVDEGLALYRSMETFGVVVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGDFVSI 724
Query: 468 WTSIILGLRLNNR 480
W +++ + ++
Sbjct: 725 WGTLLASCKAQDK 737
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 116/243 (47%), Gaps = 16/243 (6%)
Query: 367 WTTMISCYEGSVLPDKAVETYQMM-EAEGSMP--DEITIASVLSACACLGNLDLGIKLHQ 423
+ ++ Y LP+ A+ Y ++ A P D T + L+ACA L LG +H
Sbjct: 101 YNALLIAYVARALPEHALRLYALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHA 160
Query: 424 LAMRTG--LISYIIIANTLIDMYSKC------KCIDKALEVFHQIPDKNVISWTSIILGL 475
+R L ++ N+L+++Y+ C +D +F +P +N +SW ++
Sbjct: 161 HLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGWY 220
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-- 532
R EAL F +M+ + +KP V+ V++ A A+ ++ ++ G+ +
Sbjct: 221 VKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAKEDP-SWSFVLYGLLVKHGMEYVN 279
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
D F+ ++ + M+ G ++ AW F + +++ WN ++TGY + G+ A A +++
Sbjct: 280 DLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRLM 339
Query: 592 DSK 594
SK
Sbjct: 340 VSK 342
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 2/189 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE-WKRGYDEGLYLHSVVS 122
N+ + G EQA+ +M E + L +++ C+ G G +H
Sbjct: 521 NAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLCAGKQIHCFAL 580
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+ +V +G A + M+ K G++ A +VF M ++ S+ +I G + GF ALS
Sbjct: 581 RRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALS 640
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ M G+KPD TF + C + G ++ + FG ++ M
Sbjct: 641 LFYSM-QEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCIVDML 699
Query: 243 VKCGDLVRA 251
K G + A
Sbjct: 700 AKAGRVEEA 708
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 258/505 (51%), Gaps = 15/505 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL SM D+ AL + VR C G +H+ K+ + + + NA ++
Sbjct: 126 ALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVT 185
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K G + + +FG+M ++D SW +I G+A+ G EAL +++ M G P+ +
Sbjct: 186 MYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEF 245
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F V CG + L+ G+++H +++ + + +L MY +C L A+ VF G+
Sbjct: 246 HFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGI 305
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D +SWN++I+ G + ++L MR + PD +T+ ++ A + GR
Sbjct: 306 DAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGR 365
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS-CYEGS 377
+H Y++K+G DVSVCN L+ MY + VF +DVV+W ++++ C +
Sbjct: 366 LMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQ 425
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L + + + +++ D I++ +VLSA A LG ++ ++H + GL++ +++
Sbjct: 426 HL-EVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLS 484
Query: 438 NTLIDMYSKCKCIDKALEVFHQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
N LID Y+KC +D A+++F + + +V SW+S+I+G + +AL F +M L +
Sbjct: 485 NGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGV 544
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP-----NALLDMYVRCGRM 550
+PN VT V +L+AC+R+G + G + I G LP + ++D+ R GR+
Sbjct: 545 RPNHVTFVGVLTACSRVGLVDEG----CYYYSIMEPEHGVLPTREHCSCVIDLLARAGRL 600
Query: 551 KPAWNQFNSN--ERDVSAWNILLTG 573
A + E D+ W LL G
Sbjct: 601 TEAAKFVDQMPFEPDIVMWKTLLAG 625
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 264/560 (47%), Gaps = 14/560 (2%)
Query: 61 KNPNSRLNELCLNGSLEQALKYLDSM--QELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+NPN + +L +G L AL S+ + L+ C R G +H
Sbjct: 2 QNPNGTILQLYHSGRLSAALHAFQSIPSSPAPAPLSAATYAALLATCSRLRALCLGCLVH 61
Query: 119 SVVSKTMSHLSVR---LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+ + VR L N ++M+ + A VF +M ++ SW +I +A+
Sbjct: 62 RHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNR 121
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+AL L+ M G PD + +R C + D+ G++VH ++ +D+ V
Sbjct: 122 RSTDALGLFSSMLR-SGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQ 180
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLV 294
NAL+TMY K G + L+F M ++D ISW ++I+G+ + G M+ L +F M+ E +
Sbjct: 181 NALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMH 240
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
P+ SV SA ++G + G ++H +K + L MY E ++
Sbjct: 241 HPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKR 300
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF +++ D+VSW ++I+ L +A+ M G PD IT+ +L AC
Sbjct: 301 VFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDA 360
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ G +H ++ GL + + N+L+ MY++C A++VFH+ D++V++W SI+
Sbjct: 361 IQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTA 420
Query: 475 LRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ ++ E + ++ P + ++L ++LSA A +G K++H ++G+
Sbjct: 421 C-VQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVN 479
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
D L N L+D Y +CG + A F DV +W+ L+ GYA+ G A + F +M
Sbjct: 480 DTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARM 539
Query: 591 --IDSKGNWRKLMGLFRKCQ 608
+ + N +G+ C
Sbjct: 540 RNLGVRPNHVTFVGVLTACS 559
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 3/390 (0%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L+ C K G +H ++ G+ +++ + LI Y K GD V AR VFD MP+R
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
+SW+A ISGY +NG Y L++F+ M + T SV+ A + + G ++ G
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
+ K F+ ++ V + L+ ++ G E+ +F ME +DVVSW +I Y +
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
++ M EG PD T SVL A ++ ++HQL ++ G S+I ++ +LID
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRSFEALIFFRKM-MLNLKPNSVT 501
Y+KC+ + A ++ +P K++IS T+++ G R +N S +AL F+++ +++K + V
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVI 303
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
L S+ + CA I +L G++IHA AL+ +D + NAL+DMY + G +K A FN
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
E++V +W L+TGY G G A F+KM
Sbjct: 364 EKNVISWTSLITGYGSHGHGHEAIALFKKM 393
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 249/493 (50%), Gaps = 14/493 (2%)
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
++LC + G +H+ + ++ L + + K GD A VF +M +R +
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW+ I GY++ G + +AL ++ M G K + +T+ VLR C G+ L+RG ++
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDML-RAGFKANQFTYGSVLRACTGLRCLQRGMQIQG 122
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
+ + + +++ V +AL+ ++ KCG + A +F M +RD +SWNA+I Y G
Sbjct: 123 CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGD 182
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+F M + + PD T SV+ AS + D ++H +I++G+ +S+ LI
Sbjct: 183 SFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLID 242
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEI 400
Y + ++ M KD++S T +++ Y S KA++ ++ ++ D++
Sbjct: 243 AYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDV 302
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+ S+ + CA + +L +G ++H LA++ + + N LIDMY+K I A F+++
Sbjct: 303 ILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEM 362
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
+KNVISWTS+I G + EA+ F+KM LKPN +T +S+L AC G G
Sbjct: 363 EEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGW 422
Query: 520 EIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLT 572
E + ++ LP A ++D++ R G ++ A+N N + + + S W +L
Sbjct: 423 ECFNNM----ISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILG 478
Query: 573 GYAERGQGALAEE 585
G LAEE
Sbjct: 479 ACYIYGNMPLAEE 491
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 229/484 (47%), Gaps = 37/484 (7%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL M ++ +++R C R G+ + + K+ ++ +
Sbjct: 76 NGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIV 135
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A L + K G + A Y+FG M +RD+ SWN +IG YA GF ++ +++ M G
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQ-EG 194
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ PD++TF VL+ G D+ R ++H +I+ GY + + + +LI Y KC L A
Sbjct: 195 MSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAH 254
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
++ MP +D IS A+++GY + Y K L LF ++++ + D + L S+ + +
Sbjct: 255 CLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANI 314
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+GR++H +K + DV++ N LI MY G ++ + F+ ME K+V+SWT++I
Sbjct: 315 SSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLI 374
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGL 430
+ Y +A+ ++ ME EG P++IT S+L AC G G + + + + +
Sbjct: 375 TGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNI 434
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + ++D++++ +++A + ++
Sbjct: 435 LPRAEHFSCMVDLFARGGLLEEAYNLINK------------------------------- 463
Query: 491 MMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+N+KPN+ +IL AC G + +E H ++ + L D+Y G
Sbjct: 464 --MNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDPE-NSVNYVVLADIYAAAGSW 520
Query: 551 KPAW 554
AW
Sbjct: 521 DNAW 524
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H + G S I ++ LI YSK A +VF ++P++ V+SW++ I G
Sbjct: 16 GHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQ 75
Query: 478 NNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFL 536
N +AL+ F M+ K N T S+L AC + L G +I + A + +
Sbjct: 76 NGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIV 135
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ALLD++ +CG+M+ A F ERDV +WN ++ YA +G + FR M+
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQ 192
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 211/377 (55%), Gaps = 4/377 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K +H H+++ G + LI Y+KC + AR +FD MP R ++WN+MIS +
Sbjct: 21 KSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS-DDVSV 335
G+ + + L+ M V PD T S++ A +G + G++ HG + +GF D V
Sbjct: 80 GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
++ MY FG ++ VF R+ KDVV +T +I Y L +A+E ++ M
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+E T+ASVL +C LG+L G +H L +++GL S + +L+ MYSKC ++ +++
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK 259
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
VF+ + + ++WTS I+GL N R AL FR+M+ ++ PN T SIL AC+ +
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM 319
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
L G++IHA +++GV + ++ AL+ +Y +CG ++ A + F S E DV + N ++
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYA 379
Query: 574 YAERGQGALAEEFFRKM 590
YA+ G G A E F +M
Sbjct: 380 YAQNGFGHEALELFERM 396
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 236/482 (48%), Gaps = 10/482 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
LH+ + K+ S S G+ + ++K + A +F +M +R + +WN +I + G
Sbjct: 23 LHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVV 235
EA+ LY M + GV PD YTF + + + + G++ H + G+E +D V
Sbjct: 82 TKEAIELYDNMLF-EGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
++ MY K G + AR VFD + +D + + A+I GY + G + L +F M +
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIK 200
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ TL+SV+ + +GD G+ +HG V+K G V+ L+ MY E+ KV
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F+ + V+WT+ I + + A+ ++ M P+ T +S+L AC+ L L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAML 320
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G ++H + ++ G+ + LI +Y KC ++KA VF + + +V+S ++I
Sbjct: 321 EAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAY 380
Query: 476 RLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHA---HALRIGVA 531
N EAL F +M L KPN VT +SIL AC G + G +I + + I +
Sbjct: 381 AQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
D + ++D+ R R + A + DV W LL G+ +AE+F +KM
Sbjct: 441 RDHY--TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
Query: 591 ID 592
+D
Sbjct: 499 LD 500
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH +++G + + + LID Y KC I +A ++F ++P++++++W S+I +
Sbjct: 23 LHTHILKSGSL-FSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81
Query: 481 SFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPN 538
+ EA+ + M+ + P++ T +I A + +G G++ H A+ +G DGF+
Sbjct: 82 TKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVAT 141
Query: 539 ALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
++DMY + G+MK A F+ ++DV + L+ GY +RG A E F M+ S+
Sbjct: 142 GIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSR 198
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 250/471 (53%), Gaps = 17/471 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A +S F K G +G+A +F KM R++ S N LI G + +EA+ L+ M
Sbjct: 321 VGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSV 380
Query: 192 GVKPDVY-----TFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKC 245
+ P+ Y FP G ++G EVH +IR G A + + N LI MY KC
Sbjct: 381 ELNPNSYMIILTAFPEFHVLENGK---RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
G + A +VF M +D ++WN+MI+G +N ++++ + F MR + P T+ S +
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISAL 497
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
S+ +G +G ++H +K+G DVSV N L+ +Y G +E +K FS M D V
Sbjct: 498 SSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHV 557
Query: 366 SWTTMISCY---EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
SW ++I E S+L +AVE++ +M G P+ +T ++L+A + L +LG ++H
Sbjct: 558 SWNSLIGALADSEPSML--EAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIH 615
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRS 481
L ++ + + I N L+ Y KC + +F ++ D+ + +SW S+I G N
Sbjct: 616 ALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELL 675
Query: 482 FEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+A+ + + M + + T ++LSACA + L G E+H ++R + D + +AL
Sbjct: 676 PKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSAL 735
Query: 541 LDMYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY +CGR+ A F R++ +WN +++GYA G G + + F +M
Sbjct: 736 VDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQM 786
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 222/410 (54%), Gaps = 5/410 (1%)
Query: 108 KRGYDEGLYLHSVVSKT-MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNV 166
+ G +G +H+ + ++ + + + +GN ++M+ K G + A VF M ++D +WN
Sbjct: 401 ENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNS 460
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I G + F EA+ +Q M + P +T L +C + + G+++H ++
Sbjct: 461 MITGLDQNKQFLEAVKTFQEMRRTE-LYPSNFTMISALSSCASLGWISVGEQLHCEGLKL 519
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM-KGLML 285
G + DV V NAL+ +Y +CG + + F M D +SWN++I ++ M + +
Sbjct: 520 GLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVES 579
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F++M DP+ +T ++++A + +LG+++H V+K + D ++ N L+ Y
Sbjct: 580 FLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGK 639
Query: 346 FGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E +FSRM + +D VSW +MIS Y + L KA++ M +G D T A+
Sbjct: 640 CGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFAT 699
Query: 405 VLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN 464
VLSACA + L+ G+++H ++R L S I+I + L+DMY+KC ID A F +P +N
Sbjct: 700 VLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARN 759
Query: 465 VISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
+ SW S+I G + ++L F +M L P+ VT V +LSAC+ G
Sbjct: 760 LYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAG 809
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 261/512 (50%), Gaps = 20/512 (3%)
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
Y S N ++ + +L + + G + LH + K + L N ++++
Sbjct: 60 YKSSQLHHNPVQHDEKIESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYA 119
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
+ GDLG VF +M R+L SW+ LI GY + +EA L+++M G P+ Y F
Sbjct: 120 RVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMV-SDGFMPNHYAFG 178
Query: 202 CVLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR-ARLVFDGM 258
V+R C G LK G ++H + + Y DV N LI+MY +V AR FD +
Sbjct: 179 SVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSI 238
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVD---PDFMTLSSVISASELVGDE 314
R+ +S N+MIS Y + G+ + +F M +EV+ D P+ T S+ISA+ + +
Sbjct: 239 WPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANS 298
Query: 315 KLG--REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
L ++ V K GF D+ V + L+ + G+ + +F +M ++VVS +I
Sbjct: 299 GLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLII 358
Query: 373 CYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLD----LGIKLHQLAMR 427
++AVE + M+ + P+ I +L+A L+ G ++H +R
Sbjct: 359 GLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIR 416
Query: 428 TGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+GL+ + I I N LI+MY+KC I+ A VF + +K+ ++W S+I GL N + EA+
Sbjct: 417 SGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVK 476
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F++M L P++ T++S LS+CA +G + G+++H L++G+ D + NALL +Y
Sbjct: 477 TFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYG 536
Query: 546 RCGRMKPAWNQFNSN-ERDVSAWNILLTGYAE 576
CG +K F+ + D +WN L+ A+
Sbjct: 537 ECGYVKECQKAFSLMLDYDHVSWNSLIGALAD 568
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 255/494 (51%), Gaps = 16/494 (3%)
Query: 97 ALVNLVRLCE--WKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK-FGDLGHAWYVF 153
A +++R C+ + G G+ +H ++SKT V N +SM+ G + +A F
Sbjct: 176 AFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAF 235
Query: 154 GKMCDRDLFSWNVLIGGYAKAGFFDEALSLY---QRMFWVGGVKPDVYTFPCVLR-TCG- 208
+ R+L S N +I Y + G A ++ Q+ G+KP+ YTF ++ TC
Sbjct: 236 DSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSL 295
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
L +++ V + G+ D+ V +AL++ + K G + A+ +F M R+ +S N
Sbjct: 296 ANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNG 355
Query: 269 MISGYFENGEYMKGLMLFIMMRE-VLVDPD--FMTLSSVISASELVGDEKLGREVHGYVI 325
+I G + + LF+ M++ V ++P+ + L++ L ++ G EVH ++I
Sbjct: 356 LIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLI 415
Query: 326 KMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAV 384
+ G + +++ N LI MY G + VF M++KD V+W +MI+ + + +AV
Sbjct: 416 RSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAV 475
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+T+Q M P T+ S LS+CA LG + +G +LH ++ GL + ++N L+ +Y
Sbjct: 476 KTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALY 535
Query: 445 SKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS-FEALIFFRKMM-LNLKPNSVTL 502
+C + + + F + D + +SW S+I L + S EA+ F MM PN VT
Sbjct: 536 GECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTF 595
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SN 560
++IL+A + + GK+IHA L+ VA D + NALL Y +CG M N F+ S+
Sbjct: 596 ITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSD 655
Query: 561 ERDVSAWNILLTGY 574
+D +WN +++GY
Sbjct: 656 RQDEVSWNSMISGY 669
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 199/401 (49%), Gaps = 21/401 (5%)
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
+CG K +E+H+ + + G+ D+ + N LI +Y + GDL R VFD MP R+ +S
Sbjct: 86 SCGS----KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE--KLGREVHGY 323
W+ +ISGY N + LF M P+ SVI A + G+ K G ++HG
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201
Query: 324 VIKMGFSDDVSVCNPLIKMY-LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
+ K + +DV+ N LI MY + G + + F + +++VS +MIS Y
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261
Query: 383 AVETYQMMEAE----GSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---TGLISYII 435
A + + M+ E G P+E T S++SA L N L + L QL R +G + +
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL-VLLEQLLTRVEKSGFLHDLY 320
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ + L+ ++K I A +F ++ +NV+S +I+GL R EA+ F +M ++
Sbjct: 321 VGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSV 380
Query: 496 KPNSVTLVSILSACARIGALMCGK----EIHAHALRIGVAFDGF-LPNALLDMYVRCGRM 550
+ N + + IL+A L GK E+HA +R G+ + N L++MY +CG +
Sbjct: 381 ELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAI 440
Query: 551 KPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F + +D WN ++TG + Q A + F++M
Sbjct: 441 NDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEM 481
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 208/449 (46%), Gaps = 6/449 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + L N +A+K M+ + +++ + C G LH K
Sbjct: 459 NSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLK 518
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-GFFDEALS 182
L V + NA L+++ + G + F M D D SWN LIG A + EA+
Sbjct: 519 LGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVE 578
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ M G P+ TF +L + + GK++H V++ AD + NAL+ Y
Sbjct: 579 SFLVMM-RAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACY 637
Query: 243 VKCGDLVRARLVFDGMPKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
KCGD+ +F M R D +SWN+MISGY N K + + M + D T
Sbjct: 638 GKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTF 697
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++V+SA V + G EVHG ++ D+ + + L+ MY G + + F M +
Sbjct: 698 ATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPA 757
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK- 420
+++ SW +MIS Y K+++ + M+ +G +PD +T VLSAC+ G ++ G
Sbjct: 758 RNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSH 817
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG-LRLN 478
++ GL + + ++D+ + ++K + +Q+P K NV+ W +++ R N
Sbjct: 818 FDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRAN 877
Query: 479 NRSFEALIFFRKMMLNLKPNSVTLVSILS 507
R+ +M+L ++P + +LS
Sbjct: 878 GRNTALGRRAAEMLLEMEPTNAVNYILLS 906
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 11/290 (3%)
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
K E+H + K GF +D+ +CN LI +Y G+ G KVF M +++VSW+ +IS Y
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN--LDLGIKLHQLAMRTGLIS 432
+ +P++A E ++ M ++G MP+ SV+ AC G L G+++H L +T ++
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209
Query: 433 YIIIANTLIDMYSKC-KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +N LI MY +D A F I +N++S S+I + A F M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 492 MLN-----LKPNSVTLVSILSACARIG--ALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
LKPN T S++SA + L+ +++ + G D ++ +AL+ +
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 545 VRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ G + A N F + R+V + N L+ G + +G A E F +M DS
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS 379
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 261/527 (49%), Gaps = 7/527 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS-HLSVR 131
NG ++L + SM D +V C + G ++H +V K +
Sbjct: 103 NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTA 162
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G +F+ + K G L A VF +M DRD+ +W +I G+ + G + L +M G
Sbjct: 163 VGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAG 222
Query: 192 GV--KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
KP+ T C + C + LK G+ +H ++ G + V +++ + Y K G+
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A L F + D SW ++I+ +G+ + +F M+ + PD + +S +I+
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWT 368
+ G+ HG+VI+ FS D +VCN L+ MY F EK+F R+ E + +W
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
TM+ Y K +E ++ ++ G D + SV+S+C+ +G + LG LH ++T
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT 462
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
L I + N+LID+Y K + A +F + D NVI+W ++I +S +A+ F
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALF 521
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M+ N KP+S+TLV++L AC G+L G+ IH + + L AL+DMY +C
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581
Query: 548 GRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
G ++ + F++ N++D WN++++GY G A F +M +S
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 7/469 (1%)
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
++ + + +S + +G + VF + RD+F WN +I + G + +L + M
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMYVKCGD 247
+ G PD +T P V+ C + G VH V++ G ++ + V + + Y KCG
Sbjct: 118 -LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSV 304
L A LVFD MP RD ++W A+ISG+ +NGE GL M D P+ TL
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
A +G K GR +HG+ +K G + V + + Y GN E F + +D+
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
SWT++I+ S +++ + + M+ +G PD + I+ +++ + + G H
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFE 483
+R + N+L+ MY K + + A ++F +I ++ N +W +++ G +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 484 ALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
+ FRK+ L ++ +S + S++S+C+ IGA++ GK +H + ++ + + N+L+D
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLID 476
Query: 543 MYVRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+Y + G + AW F + +V WN ++ Y Q A F +M+
Sbjct: 477 LYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 246/514 (47%), Gaps = 9/514 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNL---VRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
NG E L YL M VD+ L + C EG LH K S
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ ++ S + K G+ A+ F ++ D D+FSW +I A++G +E+ ++ M
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM-Q 323
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
G+ PD C++ G + + +GK H VIR + D V N+L++MY K L
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLS 383
Query: 250 RARLVFDGMPKR-DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
A +F + + ++ +WN M+ GY + ++K + LF ++ + ++ D + +SVIS+
Sbjct: 384 VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+G LG+ +H YV+K +SV N LI +Y G+ ++F ++ +V++W
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWN 502
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI+ Y +KA+ + M +E P IT+ ++L AC G+L+ G +H+ T
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ ++ LIDMY+KC ++K+ E+F K+ + W +I G ++ A+ F
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 489 RKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
+M ++KP T +++LSAC G + GK++ + V + + L+D+ R
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRS 682
Query: 548 GRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ 579
G ++ A + S D W LL+ G+
Sbjct: 683 GNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 174/375 (46%), Gaps = 7/375 (1%)
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I G ++ V + LI+ Y G + VF + +RD WN++I +F NG+Y +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIK 341
L F M PD T V+SA + +G VHG V+K GF + +V +
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS---MPD 398
Y G ++ VF M +DVV+WT +IS + + + + M + GS P+
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
T+ AC+ LG L G LH A++ GL S + +++ YSK +A F
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
++ D+++ SWTSII L + E+ F +M + P+ V + +++ ++ +
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQ 349
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYA 575
GK H +R + D + N+LL MY + + A F S E + AWN +L GY
Sbjct: 350 GKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Query: 576 ERGQGALAEEFFRKM 590
+ E FRK+
Sbjct: 410 KMKCHVKCIELFRKI 424
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
SVI + + E L R+ + +I G S+++ V + LI Y S+G +VF + +
Sbjct: 30 SVILCDQSLSLESL-RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D+ W ++I + + +++ + M G PD T V+SACA L +G +H
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVH 148
Query: 423 QLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
L ++ G + + + YSKC + A VF ++PD++V++WT+II G N S
Sbjct: 149 GLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGES 208
Query: 482 FEALIFFRKMMLNL----KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
L + KM KPN TL AC+ +GAL G+ +H A++ G+A F+
Sbjct: 209 EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ 268
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+++ Y + G A+ F + D+ +W ++ A G + + F +M
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
E+A+ D M N LV L+ C + G +H +++T +++ L A
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ M+ K G L + +F +D WNV+I GY G + A++L+ +M VKP
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKPT 633
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
TF +L C +++GK++ + + ++ + ++ + L+ + + G+L A
Sbjct: 634 GPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 257 GMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD----FMTLSSVISASELV 311
MP D + W ++S +GE+ G+ + R V DP ++ L+++ SA+
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRM--AERAVASDPQNDGYYIMLANMYSAAGKW 751
Query: 312 GDEKLGREV 320
+ + RE+
Sbjct: 752 EEAERAREM 760
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
K + L + GL I +A+ LI Y+ + + VFH + +++ W SII N
Sbjct: 45 KHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNG 104
Query: 480 RSFEALIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD--GFL 536
+L FF M+L+ + P+ T ++SACA + G +H L+ G FD +
Sbjct: 105 DYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-GFDRNTAV 163
Query: 537 PNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS-- 593
+ + Y +CG ++ A F+ +RDV AW +++G+ + G+ + KM +
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 594 ---KGNWRKLMGLFRKCQ 608
K N R L F+ C
Sbjct: 224 DVDKPNPRTLECGFQACS 241
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 239/470 (50%), Gaps = 20/470 (4%)
Query: 133 GNAFL-----SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
GNA++ + K G L A VF WN + G + G A+ +++ M
Sbjct: 102 GNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDM 161
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
W G +P+ +T+ L C +L G+ VH V+R E DV V +L+ MY KCGD
Sbjct: 162 VW-GSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGD 220
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A F MP R+ +SW I+G+ ++ E + ++L M V + T +S++ A
Sbjct: 221 MGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS- 366
+ + ++HG V+K D V LI Y +FG E EKVF E VS
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSN 337
Query: 367 ---WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
W+ IS L ++V+ + M +G P++ ASV S+ + +++ G +LH
Sbjct: 338 RSIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSS---VNSIEFGGQLHS 393
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
A++ G I I++ + L MYS+C + + +VF ++ +++ +SWT+++ G + S E
Sbjct: 394 SAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVE 453
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A + FR M+L+ KP+ V+L +ILSAC R L+ GKE+H H LR+ F+ + +
Sbjct: 454 AFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFIS 512
Query: 543 MYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI 591
MY +C ++ A F++ R D W+ +++GYA G G A F+ M+
Sbjct: 513 MYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMV 562
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 235/484 (48%), Gaps = 15/484 (3%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H +V + V +G + ++M+ K GD+G A F +M R++ SW I G+ +
Sbjct: 189 GRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQ 248
Query: 174 AGFFDEALS--LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
DE +S L R GV + YT +L C + ++ ++H V++ D
Sbjct: 249 D---DEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLD 305
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMR 290
V ALI+ Y G + + VF+ +R W+A ISG N ++ + L M
Sbjct: 306 CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMF 364
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ P+ +SV S+ V + G ++H IK GF + V + L MY N +
Sbjct: 365 HQGLRPNDKCYASVFSS---VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQ 421
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ KVF M+ +D VSWT M++ + +A T++ M +G PD +++ ++LSAC
Sbjct: 422 DSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACN 481
Query: 411 CLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
L G ++H +R G ++ I + I MYSKC+ + A +F P K+ + W+
Sbjct: 482 RPECLLKGKEVHGHTLRVYGETTF--INDCFISMYSKCQGVQTARRIFDATPRKDQVMWS 539
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I G N EA+ F+ M+ +++ +S SILS CA I K +H +A++
Sbjct: 540 SMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKA 599
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFF 587
G+ D + ++L+ +Y R G M + F+ + D+ AW ++ GYA+ G A F
Sbjct: 600 GILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMF 659
Query: 588 RKMI 591
M+
Sbjct: 660 DLMV 663
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 259/507 (51%), Gaps = 23/507 (4%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
A+ L M + +++ +++ C E +H +V KT +L + A +
Sbjct: 254 SAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALI 313
Query: 138 SMFVKFGDLGHAWYVF---GKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
S + FG + + VF G + +R + W+ I G + ++ L +RMF G++
Sbjct: 314 STYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLL-RSVQLLRRMFH-QGLR 369
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
P+ + V + V ++ G ++H I+ G+ + V +AL TMY +C ++ + V
Sbjct: 370 PNDKCYASVFSS---VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKV 426
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD---PDFMTLSSVISASELV 311
F+ M +RD +SW AM++G+ +G ++ + F R +++D PD ++L++++SA
Sbjct: 427 FEEMQERDGVSWTAMVAGFATHGHSVEAFLTF---RNMILDGFKPDHVSLTAILSACNRP 483
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G+EVHG+ +++ + + + + I MY + ++F KD V W++MI
Sbjct: 484 ECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMI 542
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y + ++A+ +Q+M A D +S+LS CA + LH A++ G++
Sbjct: 543 SGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGIL 602
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S ++++L+ +YS+ +D + +VF +I ++++WT+II G + S AL F M
Sbjct: 603 SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLM 662
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLDMYVRCG 548
+ L ++P++V LVS+LSAC+R G + G + +++R + L + ++D+ R G
Sbjct: 663 VQLGVRPDTVVLVSVLSACSRNGLVEQGFN-YFNSMRTAYGVEPELQHYCCMVDLLGRSG 721
Query: 549 RMKPAWNQFNS--NERDVSAWNILLTG 573
R+ A +S + D+ W+ LL
Sbjct: 722 RLAEAKYFVDSMPMKPDLMVWSTLLAA 748
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 188/369 (50%), Gaps = 6/369 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LHS K + +G+A +M+ + ++ ++ VF +M +RD SW ++ G+A
Sbjct: 388 GGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFAT 447
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G EA ++ M + G KPD + +L C L +GKEVH H +R Y
Sbjct: 448 HGHSVEAFLTFRNMI-LDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTF 505
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + I+MY KC + AR +FD P++D++ W++MISGY NG + + LF +M
Sbjct: 506 INDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAAS 565
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D SS++S + + +HGY IK G D SV + L+K+Y GN ++
Sbjct: 566 IRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSR 625
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
KVF + D+V+WTT+I Y A+ + +M G PD + + SVLSAC+ G
Sbjct: 626 KVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNG 685
Query: 414 NLDLGIKLHQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTS 470
++ G +MRT G+ + ++D+ + + +A +P K +++ W++
Sbjct: 686 LVEQGFNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWST 744
Query: 471 IILGLRLNN 479
++ R+++
Sbjct: 745 LLAACRVHD 753
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 9/379 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF-DGMPKRDRISWNAMISGYFE 275
++V+ + G + V ++ + K G L A VF DG P + WNA +SG
Sbjct: 89 EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPS-SAVCWNAAVSGAVR 147
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
NGE + +F M +P+ T S +SA + +GR VHG V++ DV V
Sbjct: 148 NGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
L+ MY G+ + F RM ++VVSWTT I+ + P A+ + M G
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV 267
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
++ T S+L ACA + + ++H + ++T + ++ LI Y+ I+ + +
Sbjct: 268 AINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEK 327
Query: 456 VFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
VF + N W++ I G+ N+ ++ R+M L+PN S+ S+ +
Sbjct: 328 VFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS---VN 383
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
++ G ++H+ A++ G + +AL MY RC ++ ++ F ERD +W ++
Sbjct: 384 SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVA 443
Query: 573 GYAERGQGALAEEFFRKMI 591
G+A G A FR MI
Sbjct: 444 GFATHGHSVEAFLTFRNMI 462
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 123/251 (49%), Gaps = 10/251 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCE--WKRGYDEGLYLHSVV 121
+S ++ NG E+A+ M +I +D +++ LC + Y + L+ +++
Sbjct: 539 SSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIK 598
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
+ +S SV ++ + ++ + G++ + VF ++ DL +W +I GYA+ G AL
Sbjct: 599 AGILSDQSV--SSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNAL 656
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR--FGYEADVDVVNALI 239
+++ M + GV+PD VL C +++G + + +R +G E ++ ++
Sbjct: 657 AMFDLMVQL-GVRPDTVVLVSVLSACSRNGLVEQGFN-YFNSMRTAYGVEPELQHYCCMV 714
Query: 240 TMYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-D 297
+ + G L A+ D MP K D + W+ +++ + + + G + +RE D
Sbjct: 715 DLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVENKIREGNYDSGS 774
Query: 298 FMTLSSVISAS 308
F TLS++++ S
Sbjct: 775 FATLSNILANS 785
>gi|242034867|ref|XP_002464828.1| hypothetical protein SORBIDRAFT_01g027350 [Sorghum bicolor]
gi|241918682|gb|EER91826.1| hypothetical protein SORBIDRAFT_01g027350 [Sorghum bicolor]
Length = 447
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 220/401 (54%), Gaps = 6/401 (1%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++ + TF C+L++CG D K G++VH V++ G+ ++V V +A+ Y +CGD+ A
Sbjct: 7 GIEGNSLTFVCLLKSCGERCDAKLGQQVHCCVVKGGW-SNVIVDSAVAHFYAQCGDVAAA 65
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VFD M RD +SW MI+ Y ++G K L +F M P+ T+ S + A
Sbjct: 66 STVFDRMASRDVVSWTTMITAYVQHGHGDKALQMFPKMVSEGFRPNEFTVCSALKACAEE 125
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+++HG ++K + D+ V + L+ MY G + + VF +M ++ ++WT+MI
Sbjct: 126 KALRFGKQLHGAIVKRLYKYDIHVGSALVTMYARCGEVFDAQAVFDKMPRRNTITWTSMI 185
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y S ++AV ++ M+ + +T+ +LSAC + ++ LG +LH ++ +
Sbjct: 186 SGYAQSGCGEEAVLLFRKMKMRRVFVNHLTVVGLLSACGSMQSIYLGKELHAQIIKNCME 245
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I +TL+ YS+C A + +PD++ ++WT++I G + EAL +M
Sbjct: 246 QNLQIGSTLVWFYSRCGEHTYAARILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEM 305
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + + PN+ T S L ACAR+ AL G+ IH + + F+ +L+DMY+RCG++
Sbjct: 306 LWDGVAPNTYTYSSALKACARLEALRDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKV 365
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F++ E ++ W +++TG+ Q L EE + M
Sbjct: 366 DEARRVFDAMPEHNLVTWKVMITGFT---QNCLCEEALKYM 403
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 218/414 (52%), Gaps = 3/414 (0%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
V L++ C + G +H V K +V + +A + + GD+ A VF +M
Sbjct: 15 FVCLLKSCGERCDAKLGQQVHCCVVKG-GWSNVIVDSAVAHFYAQCGDVAAASTVFDRMA 73
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
RD+ SW +I Y + G D+AL ++ +M G +P+ +T L+ C L+ GK
Sbjct: 74 SRDVVSWTTMITAYVQHGHGDKALQMFPKMV-SEGFRPNEFTVCSALKACAEEKALRFGK 132
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H +++ Y+ D+ V +AL+TMY +CG++ A+ VFD MP+R+ I+W +MISGY ++G
Sbjct: 133 QLHGAIVKRLYKYDIHVGSALVTMYARCGEVFDAQAVFDKMPRRNTITWTSMISGYAQSG 192
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
+ ++LF M+ V + +T+ ++SA + LG+E+H +IK ++ + +
Sbjct: 193 CGEEAVLLFRKMKMRRVFVNHLTVVGLLSACGSMQSIYLGKELHAQIIKNCMEQNLQIGS 252
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ Y G ++ M +D V+WT MIS Y +A+++ M +G P
Sbjct: 253 TLVWFYSRCGEHTYAARILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEMLWDGVAP 312
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
+ T +S L ACA L L G ++H + +T S + + +LIDMY +C +D+A VF
Sbjct: 313 NTYTYSSALKACARLEALRDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEARRVF 372
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACA 510
+P+ N+++W +I G N EAL + M + + L ++LS+C
Sbjct: 373 DAMPEHNLVTWKVMITGFTQNCLCEEALKYMYLMQQDGYDVDDFVLSTVLSSCG 426
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 176/338 (52%), Gaps = 1/338 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G ++AL+ M +E + + ++ C ++ G LH + K + + +
Sbjct: 90 HGHGDKALQMFPKMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKRLYKYDIHV 149
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A ++M+ + G++ A VF KM R+ +W +I GYA++G +EA+ L+++M +
Sbjct: 150 GSALVTMYARCGEVFDAQAVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMK-MRR 208
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V + T +L CG + + GKE+H +I+ E ++ + + L+ Y +CG+ A
Sbjct: 209 VFVNHLTVVGLLSACGSMQSIYLGKELHAQIIKNCMEQNLQIGSTLVWFYSRCGEHTYAA 268
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+ + MP RD ++W AMISGY G ++ L M V P+ T SS + A +
Sbjct: 269 RILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEMLWDGVAPNTYTYSSALKACARLE 328
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ GR +HG V K +V V LI MY+ G +E +VF M ++V+W MI+
Sbjct: 329 ALRDGRRIHGVVNKTQAFSNVFVGCSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVMIT 388
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
+ + L ++A++ +M+ +G D+ +++VLS+C
Sbjct: 389 GFTQNCLCEEALKYMYLMQQDGYDVDDFVLSTVLSSCG 426
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 3/281 (1%)
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
D KLG++VH V+K G+S+ V V + + Y G+ VF RM S+DVVSWTTMI+
Sbjct: 27 DAKLGQQVHCCVVKGGWSN-VIVDSAVAHFYAQCGDVAAASTVFDRMASRDVVSWTTMIT 85
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y DKA++ + M +EG P+E T+ S L ACA L G +LH ++
Sbjct: 86 AYVQHGHGDKALQMFPKMVSEGFRPNEFTVCSALKACAEEKALRFGKQLHGAIVKRLYKY 145
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM- 491
I + + L+ MY++C + A VF ++P +N I+WTS+I G + EA++ FRKM
Sbjct: 146 DIHVGSALVTMYARCGEVFDAQAVFDKMPRRNTITWTSMISGYAQSGCGEEAVLLFRKMK 205
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
M + N +T+V +LSAC + ++ GKE+HA ++ + + + + L+ Y RCG
Sbjct: 206 MRRVFVNHLTVVGLLSACGSMQSIYLGKELHAQIIKNCMEQNLQIGSTLVWFYSRCGEHT 265
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
A + +RD AW +++GY G A + +M+
Sbjct: 266 YAARILEAMPDRDAVAWTAMISGYNNLGHNVEALKSLDEML 306
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ NS+T V +L +C G+++H ++ G + + + +A+ Y +CG + A
Sbjct: 8 IEGNSLTFVCLLKSCGERCDAKLGQQVHCCVVKGGWS-NVIVDSAVAHFYAQCGDVAAAS 66
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ RDV +W ++T Y + G G A + F KM+
Sbjct: 67 TVFDRMASRDVVSWTTMITAYVQHGHGDKALQMFPKMV 104
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 244/484 (50%), Gaps = 9/484 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG H K V +G +F+ + +G + +A +F +M DR++ SW L+ Y+
Sbjct: 77 EGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYS 136
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G E ++ Y+RM G+ + V+ +CG + D+ G ++ H ++FG E V
Sbjct: 137 DNGSKKEVINTYKRMRH-EGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKV 195
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
N+LI M+ CGD+ A +F+ M +RD ISWN++IS +N + + F MR V
Sbjct: 196 SAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLV 255
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ ++ TLS ++S V K G+ VHG +K G ++ +CN L+ +Y G ++
Sbjct: 256 HEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDA 315
Query: 353 EKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
E +F RM +D++SW +M++CY +G L A++ + M + +T S L+AC
Sbjct: 316 ELIFRRMPERDLISWNSMLACYVQDGRCLC--ALKVFAEMLWMKKEINYVTFTSALAACL 373
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G LH + GL +II NTLI Y KC + +A +VF ++P + ++W +
Sbjct: 374 DPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNA 433
Query: 471 IILGLRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALM-CGKEIHAHALR 527
+I G N EA+ F+ M + +T+V+IL +C L+ G IHAH +
Sbjct: 434 LIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVV 493
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEF 586
G D + ++L+ MY +CG + + F+ + S WN ++ A G G A +
Sbjct: 494 TGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKL 553
Query: 587 FRKM 590
+M
Sbjct: 554 VVRM 557
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 255/525 (48%), Gaps = 9/525 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NGS ++ + M+ IC +E+ + ++ C + G L K V
Sbjct: 138 NGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSA 197
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ + MF GD+ A +F +M +RD SWN +I A+ +E+ + W+
Sbjct: 198 ANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFH---WMRL 254
Query: 193 VKPDV--YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V ++ T +L CG V LK GK VH +++G E+++ + N L+++Y G
Sbjct: 255 VHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKD 314
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A L+F MP+RD ISWN+M++ Y ++G + L +F M + + +++T +S ++A
Sbjct: 315 AELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLD 374
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G+ +HG+V+ +G D++ + N LI Y E +KVF RM D V+W +
Sbjct: 375 PEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNAL 434
Query: 371 ISCYEGSVLPDKAVETYQMM-EAEGSMPDEITIASVLSACACLGNL-DLGIKLHQLAMRT 428
I + + ++AV +++M E S D ITI ++L +C +L GI +H + T
Sbjct: 435 IGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVT 494
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IF 487
G + ++LI MY+KC + + +F Q+ K W +II EAL +
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLV 554
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC 547
R ++ + + LS A + L G+++H +++G D F+ NA +DMY +C
Sbjct: 555 VRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKC 614
Query: 548 GRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
G + A +R +WN L++ A GQ A+E F M+
Sbjct: 615 GELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDML 659
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 226/455 (49%), Gaps = 4/455 (0%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ KFG + +A VF +M +R+ SWN ++ GY + G + EA+ ++ + +G +KP +
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIG-IKPSGF 59
Query: 199 TFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
++ C + K G + H I+ G DV V + + Y G + A+ +F+
Sbjct: 60 MIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
MP R+ +SW +++ Y +NG + + + MR + + ++ VIS+ + D LG
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++ G+ +K G VS N LI M+ G+ E +F+ M +D +SW ++IS +
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
L +++ + M + T++ +LS C + L G +H LA++ GL S I +
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLK 496
NTL+ +YS A +F ++P++++ISW S++ + R AL F +M+ + +
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N VT S L+AC GK +H + +G+ + + N L+ Y +C +M A
Sbjct: 360 INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419
Query: 557 FNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM 590
F + D WN L+ G+A + A F+ M
Sbjct: 420 FQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLM 454
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 244/526 (46%), Gaps = 33/526 (6%)
Query: 45 QSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRL 104
++ + N N T + NS ++ N E++ +Y M+ ++ ++ L L+ +
Sbjct: 213 EACSIFNEMNERD--TISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSI 270
Query: 105 C------EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
C +W +G +H + K ++ L N LS++ G A +F +M +
Sbjct: 271 CGSVDYLKWGKG------VHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPE 324
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RDL SWN ++ Y + G AL ++ M W+ + + TF L C GK
Sbjct: 325 RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK-EINYVTFTSALAACLDPEFFTNGKI 383
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H V+ G + ++ + N LIT Y KC + A+ VF MPK D+++WNA+I G+ N E
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAE 443
Query: 279 YMKGLMLFIMMREVLVDP-DFMT----LSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ + F +MRE D++T L S ++ +L+ K G +H + + GF D
Sbjct: 444 LNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLI---KYGIPIHAHTVVTGFDLDQ 500
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + LI MY G+ +F ++ K W +I+ ++A++ M +
Sbjct: 501 HVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSA 560
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
G D+ ++ LS A L L+ G +LH ++ G I N +DMY KC +D A
Sbjct: 561 GIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDA 620
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
L + Q D++ +SW ++I + + +A F M+ L +KPN V+ V +LSAC+
Sbjct: 621 LRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHG 680
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMYVRCGRMKPA 553
G + G +A + G P ++D+ R GR+ A
Sbjct: 681 GLVDEGLAYYASMTSV----YGIQPGIEHCVCMIDLLGRSGRLVEA 722
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 17/426 (3%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
+++ + Y+ L C+D + N G LH V + +GN
Sbjct: 356 MKKEINYVTFTSALAACLDPEFFTN-------------GKILHGFVVVLGLQDELIIGNT 402
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++ + K + A VF +M D +WN LIGG+A +EA++ ++ M
Sbjct: 403 LITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV 462
Query: 196 DVYTFPCVLRTCGGVPDL-KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D T +L +C DL K G +H H + G++ D V ++LITMY KCGDL + +
Sbjct: 463 DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYI 522
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
FD + + WNA+I+ G + L L + MR ++ D S+ +S + +
Sbjct: 523 FDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAML 582
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ G+++HG IK+GF D + N + MY G ++ ++ + + +SW T+IS
Sbjct: 583 EEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIS 642
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH-QLAMRTGLISY 433
KA ET+ M G P+ ++ +LSAC+ G +D G+ + + G+
Sbjct: 643 ARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPG 702
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
I +ID+ + + +A ++P N + W S++ R+ R+ + K +
Sbjct: 703 IEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRI-YRNLDLGRKAAKHL 761
Query: 493 LNLKPN 498
L L P+
Sbjct: 762 LELDPS 767
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 248/490 (50%), Gaps = 47/490 (9%)
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
H + LG + + G+ + ++F ++ D+++ +NV+I Y G + +AL +++
Sbjct: 68 HPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKT 127
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M G PD YT+PCVL+ C +L G ++H V++ G + ++ + N L++MY KC
Sbjct: 128 MA-NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCK 186
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
L AR V D MP RD +SWN+M++GY +NG + L L M ++ + PD T+ S++
Sbjct: 187 WLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLP 246
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A + D+V +Y+ + +F +++ K ++S
Sbjct: 247 A-----------------VTNTSCDNV--------LYV--------KDMFVKLKEKSLIS 273
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W MI+ Y + +P++AV+ Y M+ G PD ++I+SVL AC L LG ++H+
Sbjct: 274 WNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVE 333
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
R L +++ N LIDMY+KC C+ +A VF Q+ ++V+SWTS+I ++ + +A+
Sbjct: 334 RKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVA 393
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
F+KM P+ + VS+L+AC+ G + G+ G+ N ++D+
Sbjct: 394 LFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLG 453
Query: 546 RCGRMKPAWN-----QFNSNERDVSAWNILLTG---YAERGQGAL-AEEFFRKMIDSKGN 596
R G++ A++ NER W LL+ Y+ L A+ F+ + G
Sbjct: 454 RAGKIDEAYHLTRQMPMEPNER---VWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGY 510
Query: 597 WRKLMGLFRK 606
+ L ++ K
Sbjct: 511 YVLLSNIYAK 520
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 186/406 (45%), Gaps = 35/406 (8%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL +M D +++ C GL +H V K +++ +
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN +SM+ K L A V +M RD+ SWN ++ GYA+ G F++AL L + M +
Sbjct: 175 GNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLK- 233
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KPD T +L V N C +++ +
Sbjct: 234 LKPDAGTMGSLLPA---------------------------VTN------TSCDNVLYVK 260
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + ++ ISWN MI+ Y N + + L++ M+ V+PD +++SSV+ A +
Sbjct: 261 DMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLS 320
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LGR +H YV + ++ + N LI MY G +E VF +M +DVVSWT+MIS
Sbjct: 321 AAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMIS 380
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y S AV ++ M G PD I SVL+AC+ G +D G L G+
Sbjct: 381 AYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITP 440
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRL 477
I N ++D+ + ID+A + Q+P + N W S++ R+
Sbjct: 441 GIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRV 486
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 13/247 (5%)
Query: 313 DEKLGREVHGYV-IKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
D K +++H + I + S+ L++ Y + G +F + K+VV + MI
Sbjct: 50 DAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + L A+ ++ M +G PD T VL AC+ GNL +G+++H ++ GL
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLD 169
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I N L+ MY KCK +D A V ++P ++++SW S++ G N R +AL R+M
Sbjct: 170 MNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREM 229
Query: 492 M-LNLKPNSVTLVSILSACARIG-----------ALMCGKEIHAHALRIGVAFDGFLPNA 539
L LKP++ T+ S+L A + K + + + I V + +PN
Sbjct: 230 EDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNE 289
Query: 540 LLDMYVR 546
+D+Y++
Sbjct: 290 AVDLYLQ 296
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 213/410 (51%), Gaps = 28/410 (6%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
F++NV I +A + D +L L+ M V+PD YT P +L P + H
Sbjct: 82 FTYNVTIRLFASSRP-DTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARSAH 140
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG--E 278
+ + G V++LITMY D + AR VFDG+ RD +SWN+M+ Y G
Sbjct: 141 ALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVA 200
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
++G ML M+ E V P+ +TL+ V++A G+ LGR V +V G D + +
Sbjct: 201 EVEG-MLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSA 259
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G E +VF + KDVV+W MI+ Y + + ++A+ + M G PD
Sbjct: 260 LVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPD 319
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+IT+ VLS+CA +G L LG++L AMR GL + + + L+DMY+KC ++KA VF
Sbjct: 320 KITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFG 379
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALM 516
++P KN SW ++I GL N R ++A+ F M L+P+ +T + +LSAC G L
Sbjct: 380 KMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLE 439
Query: 517 CGKEIHAHALRIGVAFDGFLP-----------NALLDMYVRCGRMKPAWN 555
G+++ F+ P + ++D+ R G ++ AW+
Sbjct: 440 YGRQL----------FNSLTPVFKIIPRIEHYSCIVDLLARAGHLEEAWD 479
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 175/332 (52%), Gaps = 2/332 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ ++M+ D A VF + RD+ SWN ++ Y +AG E + + M G V
Sbjct: 156 HSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAV 215
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P+ T VL C +L G+ V V G E D + +AL+ MY KCG++ AR
Sbjct: 216 APNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARR 275
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VFDG+ +D ++WNAMI+GY +NG + + LF MRE + PD +TL V+S+ VG
Sbjct: 276 VFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGA 335
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
KLG E+ Y ++ G ++V V L+ MY G+ E+ VF +M K+ SW +I
Sbjct: 336 LKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICG 395
Query: 374 YEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLI 431
+ A++ +++M E G PD+IT VLSAC G L+ G +L + L +I
Sbjct: 396 LAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKII 455
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
I + ++D+ ++ +++A + ++P K
Sbjct: 456 PRIEHYSCIVDLLARAGHLEEAWDFIEEMPGK 487
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 6/348 (1%)
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASEL 310
L+ P ++N I F + L LF+ M EV V PD TL ++ A+
Sbjct: 71 LLLSSHPAPTAFTYNVTIR-LFASSRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAAR 129
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
L R H + K+G D + LI MY + +VF + +DVVSW +M
Sbjct: 130 CPAPALARSAHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSM 189
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+ YE + + + + M EG++ P+ +T+A VL+AC GNL LG + + G
Sbjct: 190 VKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAG 249
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ +I + L+ MY KC + +A VF I K+V++W ++I G N S EA+ F
Sbjct: 250 MEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFH 309
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
M L P+ +TLV +LS+CA +GAL G E+ +A+R G+ + ++ AL+DMY +CG
Sbjct: 310 SMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCG 369
Query: 549 RMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
++ A + F ++ ++WN L+ G A G+G A + F M D KG
Sbjct: 370 DLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKG 417
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+G+A + M+ K G++ A VF + +D+ +WN +I GYA+ G +EA++L+ M
Sbjct: 256 IGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMR-EA 314
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD T VL +C V LK G E+ + +R G +V V AL+ MY KCGDL +A
Sbjct: 315 GLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGTALVDMYAKCGDLEKA 374
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDPDFMTLSSVISASEL 310
VF MP ++ SWNA+I G NG + F +MR E + PD +T V+SA
Sbjct: 375 THVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITFIGVLSACVH 434
Query: 311 VGDEKLGREV 320
G + GR++
Sbjct: 435 AGLLEYGRQL 444
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG +A+ SM+E +C D+ LV ++ C G+ L + +
Sbjct: 289 NAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMR 348
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +V +G A + M+ K GDL A +VFGKM ++ SWN LI G A G +A+
Sbjct: 349 RGLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQ 408
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
++ M G++PD TF VL C L+ G+++ + F ++ + ++ +
Sbjct: 409 FELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLL 468
Query: 243 VKCGDLVRARLVFDGMP-KRDRISWNAMISG 272
+ G L A + MP K D + A+++
Sbjct: 469 ARAGHLEEAWDFIEEMPGKVDAVMLGALLAA 499
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 259/531 (48%), Gaps = 14/531 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRG------YDEGLYLHSVVSKTMS 126
NG E L M + +E AL + + C G + G +H ++ ++
Sbjct: 155 NGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEV 214
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQR 186
S + N+ + M+ K G +A VF ++ D+D+ SWN + G ++ E + +
Sbjct: 215 GFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHK 274
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ + G+KP+ TF + R CG DL G + H RFG + V ++LI M+ +CG
Sbjct: 275 LM-LTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCG 333
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ A LVFD P + + N MISGY N + L LF + + ++ D T SS +
Sbjct: 334 AMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALE 393
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
A ++KLGR++HG ++K GF+ VC+ L+K Y+ FG ++ + F+ +E D+VS
Sbjct: 394 ACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVS 453
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
W MIS +A+ ++ G PDE S+ + CA + +H L +
Sbjct: 454 WGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVV 513
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEAL 485
+ G +++ +A+ +ID Y+KC I+ A VF Q ++VI + ++++ + EA+
Sbjct: 514 KMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAV 573
Query: 486 IFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN--ALLD 542
F KM L L+P+ T VS++SAC+ +G + G +I ++ + D N L+D
Sbjct: 574 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQG-DIFFKSMNLDYGMDPSPDNYGCLVD 632
Query: 543 MYVRCGRMKPAWNQFNSNERD--VSAWNILLTGYAERGQGALAEEFFRKMI 591
++ R G ++ A + + + W LL G G L E +K++
Sbjct: 633 LFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLL 683
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 194/391 (49%), Gaps = 14/391 (3%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G ++H +I+ G+ D+ N LI MY KCG L VF MP ++ +SW ++SG +
Sbjct: 95 GSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQ 154
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE------LVGDEKLGREVHGYVIKMGF 329
NGE+ GL +++ M + P+ L V A +VG+ GR++HG +I+
Sbjct: 155 NGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEV 214
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVET--- 386
+V N L+ MY G KVF R++ KD++SW T+ + G D A E
Sbjct: 215 GFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTV---FAGLSQGDDAREIGRF 271
Query: 387 YQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
+ + G P+ +T + + C +L G++ H LA R G+ + ++LI+M+S+
Sbjct: 272 FHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSR 331
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C + A VF P K++ + +I G LN + EAL F + L L+ + T S
Sbjct: 332 CGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSA 391
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNER-DV 564
L AC R G+++H ++ G A G++ ++LL YV G + ++ FN ER D+
Sbjct: 392 LEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDL 451
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
+W +++ +G + A ++ ++ G
Sbjct: 452 VSWGAMISALVHKGYSSEAIGLLNRLKEAGG 482
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 218/466 (46%), Gaps = 10/466 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N + M+ K G L VFG+M ++L SW +++ G + G F+ L +Y M G V
Sbjct: 115 NNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLV 174
Query: 194 KPDVYTFPCVLRTC---GG---VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
P+ + CV + C GG V +L G+++H +I+ V+N+L+ MY K G
Sbjct: 175 -PNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGG 233
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ A VFD + +D ISWN + +G + + + F + + P+ +T S +
Sbjct: 234 GLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRF 293
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
D G + H + G SD+ SV + LI M+ G VF K + +
Sbjct: 294 CGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTC 353
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
MIS Y + +A+ + + G DE T +S L AC N LG ++H ++
Sbjct: 354 NEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVK 413
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G S + ++L+ Y +D + E F+ + +++SW ++I L S EA+
Sbjct: 414 SGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGL 473
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
++ KP+ SI + CA I A K +H+ +++G F+ +A++D Y +
Sbjct: 474 LNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAK 533
Query: 547 CGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG ++ A F+ S RDV +N ++ YA G A E F KM
Sbjct: 534 CGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKM 579
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 148/280 (52%), Gaps = 8/280 (2%)
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
LG ++H +IK+GF +D+ N LI+MY G G KVF M K++VSWT ++S
Sbjct: 94 LGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAV 153
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL------GNLDLGIKLHQLAMRTG 429
+ + + Y M G +P+E + V ACA L GNL+ G ++H L +++
Sbjct: 154 QNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSE 213
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFR 489
+ + N+L+DMY K AL+VF ++ DK++ISW ++ GL + + E FF
Sbjct: 214 VGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFH 273
Query: 490 KMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
K+ML LKPN VT + C L+ G + H A R G++ + + ++L++M+ RCG
Sbjct: 274 KLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCG 333
Query: 549 RMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
M+ A F+S + + N +++GY A A F
Sbjct: 334 AMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLF 373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 12/221 (5%)
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D +++ L+ A + LG ++H ++ G + I N LI MY+KC + L+VF
Sbjct: 75 DPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVF 134
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEA--LIFFRKMMLNLKPNSVTLVSILSACARIGAL 515
++P KN++SWT ++ G + N FE ++ + L PN L + ACA +G
Sbjct: 135 GEMPMKNLVSWTLVVSG-AVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGC 193
Query: 516 MC------GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ G++IH ++ V F + N+L+DMY + G A F+ ++D+ +WN
Sbjct: 194 LVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWN 253
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ G ++ FF K++ + K N LFR C
Sbjct: 254 TVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFC 294
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 67 LNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMS 126
++ L G +A+ L+ ++E DE ++ C Y + +HS+V K
Sbjct: 458 ISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGY 517
Query: 127 HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQ 185
V + +A + + K GD+ +A VF + RD+ +N ++ YA G EA+ ++
Sbjct: 518 EAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFE 577
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV-IRFGYEADVDVVNALITMYVK 244
+M + ++P TF V+ C + +++G + + +G + D L+ ++ +
Sbjct: 578 KM-KLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSR 636
Query: 245 CGDLVRARLVFDGMP 259
G L A+ + + MP
Sbjct: 637 NGFLEDAKHIIETMP 651
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L+ + + L + L+ A ++ G +IHA +++G D F N L+ MY +CG +
Sbjct: 70 LSFRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAG 129
Query: 553 AWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F +++ +W ++++G + G+ + + +MI
Sbjct: 130 GLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMI 169
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 222/423 (52%), Gaps = 28/423 (6%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G L +A VF ++ + F+ N +I GY +A+ YQ M + G+ PD +TFP +
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMM-LQGLDPDRFTFPSL 146
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
++CG L GK++H H + G+ +D + N L+ MY CG LV AR VFD M +
Sbjct: 147 FKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 203
Query: 264 ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGY 323
+SW MI Y + + + LF M V P+ +TL +V++A D + ++VH Y
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKY 263
Query: 324 VIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKA 383
+ + G + + L+ +Y G +F++M K++ W MI+ + ++A
Sbjct: 264 IDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEA 323
Query: 384 VETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDM 443
+ + M+ G D++T+AS+L AC LG L+LG LH + + + + L+DM
Sbjct: 324 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 383
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTL 502
Y+KC I+ A+ VF ++P+K+V++WT++I+GL + + +AL F +M M +KP+++T
Sbjct: 384 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 443
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN------------ALLDMYVRCGRM 550
V +L+AC+ HA + G+A+ +PN ++DM R GR+
Sbjct: 444 VGVLAACS-----------HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRI 492
Query: 551 KPA 553
A
Sbjct: 493 AEA 495
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 219/415 (52%), Gaps = 14/415 (3%)
Query: 201 PCVL--RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV--KCGDLVRARLVFD 256
PC+L C + LK ++H ++R D + ++ G L ARLVF+
Sbjct: 42 PCLLSLEKCTTMSQLK---QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFN 98
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+P + N++I GY + ++ + +M +DPD T S+ + ++ +
Sbjct: 99 QIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE--- 155
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G+++H + K+GF+ D + N L+ MY + G KVF +M +K VVSW TMI Y
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
LP +A++ ++ ME P+EIT+ +VL+ACA +L+ ++H+ TG+ + ++
Sbjct: 216 WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVL 275
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-L 495
+ L+D+Y KC C A ++F+++P+KN+ W +I G ++ EAL F +M L+ +
Sbjct: 276 TSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 335
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
K + VT+ S+L AC +GAL GK +H + + + D L AL+DMY +CG ++ A
Sbjct: 336 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 395
Query: 556 QFNS-NERDVSAWNILLTGYAERGQGALAEEFFR--KMIDSKGNWRKLMGLFRKC 607
F E+DV W L+ G A GQG A E F +M + K + +G+ C
Sbjct: 396 VFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 182/354 (51%), Gaps = 10/354 (2%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
EG LH +K + N ++M+ G L A VF KM ++ + SW +IG YA
Sbjct: 155 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 214
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+ EA+ L++RM + VKP+ T VL C DL+ K+VH ++ G
Sbjct: 215 QWDLPHEAIKLFRRM-EIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ +AL+ +Y KCG AR +F+ MP+++ WN MI+G+ E+ +Y + L LF M+
Sbjct: 274 VLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 333
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
V D +T++S++ A +G +LG+ +H Y+ K DV++ L+ MY G+ E
Sbjct: 334 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 393
Query: 353 EKVFSRMESKDVVSWTTMIS----CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+VF M KDV++WT +I C +G KA+E + M+ PD IT VL+A
Sbjct: 394 MRVFQEMPEKDVMTWTALIVGLAMCGQGL----KALELFHEMQMSEVKPDAITFVGVLAA 449
Query: 409 CACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
C+ G ++ GI + + + G+ I ++DM + I +A ++ +P
Sbjct: 450 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 1/236 (0%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
+A+K M+ ++ +E LVN++ C R + +H + +T L +A
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
+ ++ K G A +F KM +++LF WN++I G+ + ++EALSL+ M + GVK D
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEM-QLSGVKGD 338
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T +L C + L+ GK +HV++ + E DV + AL+ MY KCG + A VF
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 398
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
MP++D ++W A+I G G+ +K L LF M+ V PD +T V++A G
Sbjct: 399 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 454
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +N + E+AL + MQ + D+ + +L+ C + G +LH + K
Sbjct: 308 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 367
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V LG A + M+ K G + A VF +M ++D+ +W LI G A G +AL L
Sbjct: 368 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALEL 427
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI-RFGYEADVDVVNALITMY 242
+ M + VKPD TF VL C + G + ++G + ++ ++ M
Sbjct: 428 FHEM-QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDML 486
Query: 243 VKCGDLVRARLVFDGMP 259
+ G + A + MP
Sbjct: 487 GRAGRIAEAEDLIQNMP 503
>gi|302807608|ref|XP_002985498.1| hypothetical protein SELMODRAFT_122489 [Selaginella moellendorffii]
gi|300146704|gb|EFJ13372.1| hypothetical protein SELMODRAFT_122489 [Selaginella moellendorffii]
Length = 589
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 231/461 (50%), Gaps = 13/461 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G + A VF ++ R++FSW ++ Y + G + AL L Q M G +PD +
Sbjct: 1 MYGRCGSIIDARAVFQEIWTRNVFSWTLMTAAYIQNGHMELALRLLQEMDLDGSSRPDSF 60
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDG 257
F +R C + DL + +H + G +D + N+L+ +Y KCG L A VFD
Sbjct: 61 VFANSVRACAALQDLATARALHDRIFATGLLHSDTLLQNSLVNLYSKCGSLADAIRVFDE 120
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDEK 315
+ +D +SWN+M+ + ENGE +K L L M V + D +TL ++ A +G
Sbjct: 121 ISNKDLVSWNSMLRAHVENGEPLKALKLHQRMELEGVWNEADDITLLCLVQACADLGSLT 180
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISC 373
+ RE+ + + + + N L+ MY G+ E+ E VF + SK VV+WT +I
Sbjct: 181 VARELDTRITR-SRAMAAKMANGLVSMYAKCGSLEDAEDVFEDLPSSSKSVVAWTCLIDG 239
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + A+ Y+ ME EG PD + +VL C ++ K+H GL
Sbjct: 240 YAQAGRGKDALRAYRRMELEGVKPDTVAFVAVLGGCDLSSDIR---KIHSSVQEAGLEMT 296
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR-SFEALIFFRKM- 491
I +A L + Y +C +D A ++F +P+KNV++W S++ + + EAL +M
Sbjct: 297 IGVATALTNAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGLFAGEALNLHWQMN 356
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+L + P+ T +S+L AC+ + + G+E HA L + + L AL+ MY CG ++
Sbjct: 357 VLGVVPDEFTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLACALVTMYGECGCLE 416
Query: 552 PAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ ++ RDV AW ++ + G E FR+M
Sbjct: 417 SAKAIFDGMASTRDVVAWTSMIGASSRCKDGRRTVELFREM 457
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 236/494 (47%), Gaps = 21/494 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYDEGLYLHSVVSKT-MSHLS 129
NG +E AL+ L M +L+ D+ V N VR C + LH + T + H
Sbjct: 36 NGHMELALRLLQEM-DLDGSSRPDSFVFANSVRACAALQDLATARALHDRIFATGLLHSD 94
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
L N+ ++++ K G L A VF ++ ++DL SWN ++ + + G +AL L+QRM
Sbjct: 95 TLLQNSLVNLYSKCGSLADAIRVFDEISNKDLVSWNSMLRAHVENGEPLKALKLHQRME- 153
Query: 190 VGGV--KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+ GV + D T C+++ C + L +E+ + R A + N L++MY KCG
Sbjct: 154 LEGVWNEADDITLLCLVQACADLGSLTVARELDTRITRSRAMA-AKMANGLVSMYAKCGS 212
Query: 248 LVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L A VF+ +P + ++W +I GY + G L + M V PD + +V+
Sbjct: 213 LEDAEDVFEDLPSSSKSVVAWTCLIDGYAQAGRGKDALRAYRRMELEGVKPDTVAFVAVL 272
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+L D R++H V + G + V L Y + K+F M K+VV
Sbjct: 273 GGCDLSSDI---RKIHSSVQEAGLEMTIGVATALTNAYGRCHEVDAARKIFDAMPEKNVV 329
Query: 366 SWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+W +M++ Y + + +A+ + M G +PDE T SVL AC+ L N++ G + H
Sbjct: 330 TWNSMVAAYSQHGLFAGEALNLHWQMNVLGVVPDEFTYLSVLGACSSLRNVEQGRETHAR 389
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFE 483
+ L + + +A L+ MY +C C++ A +F + ++V++WTS+I
Sbjct: 390 ILERSLETNMSLACALVTMYGECGCLESAKAIFDGMASTRDVVAWTSMIGASSRCKDGRR 449
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNA 539
+ FR+M L + PN V+L +L+AC+ +G + K A I +
Sbjct: 450 TVELFREMSLAGVNPNEVSLTCLLNACSHLGMMDEAKSYFSSMAQDYSISATVEHL--RC 507
Query: 540 LLDMYVRCGRMKPA 553
L+D+ R G++ A
Sbjct: 508 LVDLLARSGKLDEA 521
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 199/397 (50%), Gaps = 12/397 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNIC--VDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS L NG +ALK M+ + D+ L+ LV+ C L + +
Sbjct: 130 NSMLRAHVENGEPLKALKLHQRMELEGVWNEADDITLLCLVQACADLGSLTVARELDTRI 189
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDE 179
+++ + ++ ++ N +SM+ K G L A VF + + + +W LI GYA+AG +
Sbjct: 190 TRSRA-MAAKMANGLVSMYAKCGSLEDAEDVFEDLPSSSKSVVAWTCLIDGYAQAGRGKD 248
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
AL Y+RM + GVKPD F VL C D+++ +H V G E + V AL
Sbjct: 249 ALRAYRRME-LEGVKPDTVAFVAVLGGCDLSSDIRK---IHSSVQEAGLEMTIGVATALT 304
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM-KGLMLFIMMREVLVDPDF 298
Y +C ++ AR +FD MP+++ ++WN+M++ Y ++G + + L L M + V PD
Sbjct: 305 NAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGLFAGEALNLHWQMNVLGVVPDE 364
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T SV+ A + + + GRE H +++ ++S+ L+ MY G E + +F
Sbjct: 365 FTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLACALVTMYGECGCLESAKAIFDG 424
Query: 359 MES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M S +DVV+WT+MI + VE ++ M G P+E+++ +L+AC+ LG +D
Sbjct: 425 MASTRDVVAWTSMIGASSRCKDGRRTVELFREMSLAGVNPNEVSLTCLLNACSHLGMMDE 484
Query: 418 GIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+A + + + L+D+ ++ +D+A
Sbjct: 485 AKSYFSSMAQDYSISATVEHLRCLVDLLARSGKLDEA 521
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 131/254 (51%), Gaps = 11/254 (4%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS V + +++ + A + + + ++ A +F M ++++ +WN ++ Y++ G
Sbjct: 284 IHSSVQEAGLEMTIGVATALTNAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGL 343
Query: 177 F-DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F EAL+L+ +M V GV PD +T+ VL C + ++++G+E H ++ E ++ +
Sbjct: 344 FAGEALNLHWQMN-VLGVVPDEFTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLA 402
Query: 236 NALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
AL+TMY +CG L A+ +FDGM RD ++W +MI + + + LF M V
Sbjct: 403 CALVTMYGECGCLESAKAIFDGMASTRDVVAWTSMIGASSRCKDGRRTVELFREMSLAGV 462
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMG----FSDDVSVCNPLIKMYLSFGNRE 350
+P+ ++L+ +++A +G + E Y M S V L+ + G +
Sbjct: 463 NPNEVSLTCLLNACSHLG---MMDEAKSYFSSMAQDYSISATVEHLRCLVDLLARSGKLD 519
Query: 351 EGE-KVFSRMESKD 363
E E V S++ +D
Sbjct: 520 EAEFLVLSKVSPED 533
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 244/486 (50%), Gaps = 9/486 (1%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDL--GHAWYVFGKM--CDRDLFSWNVLI 168
+G LH+ K+ S + N+ ++ + F L A+ VF + RD+ SWN L+
Sbjct: 30 DGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLL 89
Query: 169 GGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF-G 227
+ ALS ++ M + P ++F G VH +
Sbjct: 90 NPLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPS 148
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF- 286
++V V AL+ MY K G + A+LVFD MP R+ +SW AM++GY + LF
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF 346
M+ E + + ++V+SA + +G +VHG V+K G VSV N L+ MY
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKA 268
Query: 347 GNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
G + VF + ++ ++W+ MI+ Y + + AV + M A G P E T+ VL
Sbjct: 269 GCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVL 328
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+AC+ +G L G + H L ++ G + + + L+DMY+KC CI A E F+Q + +++
Sbjct: 329 NACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIV 388
Query: 467 SWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHA 525
WT+++ G N +AL+ + +M + PN++T+ S+L ACA + AL GK++H
Sbjct: 389 LWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQI 448
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
L+ G + +AL MY +CG ++ F RDV AWN +++G+++ G+G A
Sbjct: 449 LKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAI 508
Query: 585 EFFRKM 590
F +M
Sbjct: 509 NLFEEM 514
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 210/399 (52%), Gaps = 2/399 (0%)
Query: 117 LHSVVSKTMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+H++ K S S V + A L+M+ K G + A VF +M R+ SW ++ GYA
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
EA L+++M + + + VL L G +VH V++ G V V
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
N+L+TMY K G + A VF+ +R+ I+W+AMI+GY +NG + +F M
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P TL V++A VG G++ HG ++K+GF V V + L+ MY G + ++
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKEC 378
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F++ D+V WT M++ + + ++A+ Y M+ EG P+ +TI S+L ACA L L
Sbjct: 379 FNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAAL 438
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+ G +LH ++ G + + L MYSKC ++ + VF ++P ++VI+W SII G
Sbjct: 439 EPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGF 498
Query: 476 RLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
N R +A+ F +M L P+ VT +++L AC+ +G
Sbjct: 499 SQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMG 537
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 209/388 (53%), Gaps = 4/388 (1%)
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
G G+ +H +V K V + N+ ++M+ K G + A++VF +R+ +W+ +I
Sbjct: 235 GLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMIT 294
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
GY++ G + A+ ++ +M G P +T VL C V L GK+ H +++ G+E
Sbjct: 295 GYSQNGNAESAVRMFSQMH-AAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFE 353
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V V +AL+ MY KCG + A+ F+ + D + W AM++G+ +NGE+ + LML+ M
Sbjct: 354 VQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARM 413
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
+ V P+ +T++S++ A + + G+++H ++K GF SV + L MY GN
Sbjct: 414 DKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNL 473
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E+G VF RM +DV++W ++IS + + + A+ ++ M+ EG+ PD +T +VL AC
Sbjct: 474 EDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCAC 533
Query: 410 ACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVIS 467
+ +G +D G + ++ GL + ++D+ S+ + +A + I D
Sbjct: 534 SHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCL 593
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLNL 495
W I+LG + R F+ + + +++L
Sbjct: 594 W-RIVLGACRSLRDFDVGAYAGEKLMDL 620
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 16/407 (3%)
Query: 214 KRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV--RARLVFDGMPK--RDRISWNAM 269
+ G+ +H ++ G + V N+LIT Y L A VF +P RD SWN++
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM-G 328
++ + M+ + P + ++ +A+ G VH K+
Sbjct: 89 LNPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPS 148
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
S +V V L+ MY G + + VF M ++ VSW M++ Y +A E ++
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 389 MMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M E + +E +VLSA + L +G+++H L ++ G++ ++ + N+L+ MY+K
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKA 268
Query: 448 KCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSIL 506
C+D A VF ++N I+W+++I G N + A+ F +M P TLV +L
Sbjct: 269 GCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVL 328
Query: 507 SACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRC---GRMKPAWNQFNSNERD 563
+AC+ +G LM GK+ H +++G ++ +AL+DMY +C G K +NQF +E D
Sbjct: 329 NACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQF--SELD 386
Query: 564 VSAWNILLTGYAERGQGALAEEFFRKMIDSKG---NWRKLMGLFRKC 607
+ W ++TG+ + G+ A + +M D +G N + L R C
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARM-DKEGVFPNTLTITSLLRAC 432
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG+ E A++ M E LV ++ C EG H ++ K + V +
Sbjct: 299 NGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYV 358
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+A + M+ K G +G A F + + D+ W ++ G+ + G F++AL LY RM G
Sbjct: 359 KSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMD-KEG 417
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ T +LR C G+ L+ GK++H +++FG+ V +AL TMY KCG+L
Sbjct: 418 VFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGM 477
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+VF MP RD I+WN++ISG+ +NG + LF M+ PD +T +V+ A +G
Sbjct: 478 VVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMG 537
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG EQAL M + + + + +L+R C + G LH+ + K L +
Sbjct: 400 NGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASV 459
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G+A +M+ K G+L VF +M RD+ +WN +I G+++ G ++A++L++ M + G
Sbjct: 460 GSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEM-KLEG 518
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRA 251
PD TF VL C + + RG +I+ +G +D ++ + + G L A
Sbjct: 519 TAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEA 578
Query: 252 R 252
+
Sbjct: 579 K 579
>gi|302810761|ref|XP_002987071.1| hypothetical protein SELMODRAFT_125319 [Selaginella moellendorffii]
gi|300145236|gb|EFJ11914.1| hypothetical protein SELMODRAFT_125319 [Selaginella moellendorffii]
Length = 589
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 231/461 (50%), Gaps = 13/461 (2%)
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ + G + A VF ++ R++FSW ++ Y + G + AL L Q M G +PD +
Sbjct: 1 MYGRCGSIIDARAVFQEIWTRNVFSWTLMTAAYIQNGHMELALRLLQEMDLDGSSRPDSF 60
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGY-EADVDVVNALITMYVKCGDLVRARLVFDG 257
F +R C + DL + +H + G +D + N+L+ +Y KCG L A VFD
Sbjct: 61 VFANSVRACAALQDLATARALHDRIFATGLLHSDTLLQNSLVNLYSKCGSLADAIRVFDE 120
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMM--REVLVDPDFMTLSSVISASELVGDEK 315
+ +D +SWN+M+ + ENGE +K L L M V + D +TL ++ A +G
Sbjct: 121 ISNKDLVSWNSMLRAHVENGEPLKALKLHQRMELEGVWNEADDITLLCLVQACADLGSLT 180
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM--ESKDVVSWTTMISC 373
+ RE+ + + + + N L+ MY G+ E+ E VF + SK VV+WT +I
Sbjct: 181 VARELDTRITR-SRAMAAKMANGLVSMYAKCGSLEDAEDVFEDLPSSSKSVVAWTCLIDG 239
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
Y + A+ Y+ ME EG PD + +VL C ++ K+H GL
Sbjct: 240 YAQAGRGKDALRAYRRMELEGVKPDTVAFVAVLGGCDLSSDIR---KIHSSVQEAGLEMT 296
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR-SFEALIFFRKM- 491
I +A L + Y +C +D A ++F +P+KNV++W S++ + + EAL +M
Sbjct: 297 IGVATALTNAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGLFAGEALNLHWQMN 356
Query: 492 MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+L + P+ T +S+L AC+ + + G+E HA L + + L AL+ MY CG ++
Sbjct: 357 VLGVVPDEFTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLACALVTMYGECGCLE 416
Query: 552 PAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A F+ ++ RDV AW ++ + G E FR+M
Sbjct: 417 SAKAIFDGMASTRDVVAWTSMIGASSRCKDGRRTMELFREM 457
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 236/494 (47%), Gaps = 21/494 (4%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALV--NLVRLCEWKRGYDEGLYLHSVVSKT-MSHLS 129
NG +E AL+ L M +L+ D+ V N VR C + LH + T + H
Sbjct: 36 NGHMELALRLLQEM-DLDGSSRPDSFVFANSVRACAALQDLATARALHDRIFATGLLHSD 94
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
L N+ ++++ K G L A VF ++ ++DL SWN ++ + + G +AL L+QRM
Sbjct: 95 TLLQNSLVNLYSKCGSLADAIRVFDEISNKDLVSWNSMLRAHVENGEPLKALKLHQRME- 153
Query: 190 VGGV--KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
+ GV + D T C+++ C + L +E+ + R A + N L++MY KCG
Sbjct: 154 LEGVWNEADDITLLCLVQACADLGSLTVARELDTRITRSRAMA-AKMANGLVSMYAKCGS 212
Query: 248 LVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
L A VF+ +P + ++W +I GY + G L + M V PD + +V+
Sbjct: 213 LEDAEDVFEDLPSSSKSVVAWTCLIDGYAQAGRGKDALRAYRRMELEGVKPDTVAFVAVL 272
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+L D R++H V + G + V L Y + K+F M K+VV
Sbjct: 273 GGCDLSSDI---RKIHSSVQEAGLEMTIGVATALTNAYGRCHEVDAARKIFDAMPEKNVV 329
Query: 366 SWTTMISCY-EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+W +M++ Y + + +A+ + M G +PDE T SVL AC+ L N++ G + H
Sbjct: 330 TWNSMVAAYSQHGLFAGEALNLHWQMNVLGVVPDEFTYLSVLGACSSLRNVEQGRETHAR 389
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFE 483
+ L + + +A L+ MY +C C++ A +F + ++V++WTS+I
Sbjct: 390 ILERSLETNMSLACALVTMYGECGCLESAKAIFDGMASTRDVVAWTSMIGASSRCKDGRR 449
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIH---AHALRIGVAFDGFLPNA 539
+ FR+M L + PN V+L +L+AC+ +G + K A I +
Sbjct: 450 TMELFREMSLAGVNPNEVSLTCLLNACSHLGMMDEAKSYFSSMAQDYSISATVEHL--RC 507
Query: 540 LLDMYVRCGRMKPA 553
L+D+ R G++ A
Sbjct: 508 LVDLLARSGKLDEA 521
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 199/397 (50%), Gaps = 12/397 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNIC--VDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS L NG +ALK M+ + D+ L+ LV+ C L + +
Sbjct: 130 NSMLRAHVENGEPLKALKLHQRMELEGVWNEADDITLLCLVQACADLGSLTVARELDTRI 189
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDE 179
+++ + ++ ++ N +SM+ K G L A VF + + + +W LI GYA+AG +
Sbjct: 190 TRSRA-MAAKMANGLVSMYAKCGSLEDAEDVFEDLPSSSKSVVAWTCLIDGYAQAGRGKD 248
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALI 239
AL Y+RM + GVKPD F VL C D+++ +H V G E + V AL
Sbjct: 249 ALRAYRRME-LEGVKPDTVAFVAVLGGCDLSSDIRK---IHSSVQEAGLEMTIGVATALT 304
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM-KGLMLFIMMREVLVDPDF 298
Y +C ++ AR +FD MP+++ ++WN+M++ Y ++G + + L L M + V PD
Sbjct: 305 NAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGLFAGEALNLHWQMNVLGVVPDE 364
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T SV+ A + + + GRE H +++ ++S+ L+ MY G E + +F
Sbjct: 365 FTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLACALVTMYGECGCLESAKAIFDG 424
Query: 359 MES-KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
M S +DVV+WT+MI + +E ++ M G P+E+++ +L+AC+ LG +D
Sbjct: 425 MASTRDVVAWTSMIGASSRCKDGRRTMELFREMSLAGVNPNEVSLTCLLNACSHLGMMDE 484
Query: 418 GIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+A + + + L+D+ ++ +D+A
Sbjct: 485 AKSYFSSMAQDYSISATVEHLRCLVDLLARSGKLDEA 521
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+HS V + +++ + A + + + ++ A +F M ++++ +WN ++ Y++ G
Sbjct: 284 IHSSVQEAGLEMTIGVATALTNAYGRCHEVDAARKIFDAMPEKNVVTWNSMVAAYSQHGL 343
Query: 177 F-DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
F EAL+L+ +M V GV PD +T+ VL C + ++++G+E H ++ E ++ +
Sbjct: 344 FAGEALNLHWQMN-VLGVVPDEFTYLSVLGACSSLRNVEQGRETHARILERSLETNMSLA 402
Query: 236 NALITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
AL+TMY +CG L A+ +FDGM RD ++W +MI + + + LF M V
Sbjct: 403 CALVTMYGECGCLESAKAIFDGMASTRDVVAWTSMIGASSRCKDGRRTMELFREMSLAGV 462
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMG----FSDDVSVCNPLIKMYLSFGNRE 350
+P+ ++L+ +++A +G + E Y M S V L+ + G +
Sbjct: 463 NPNEVSLTCLLNACSHLG---MMDEAKSYFSSMAQDYSISATVEHLRCLVDLLARSGKLD 519
Query: 351 EGEKVFS--------RMESKDV-VSWTTMIS 372
E E + S R+E D V+ T ++S
Sbjct: 520 EAEFLVSSKVSPEDGRLEKSDASVALTILLS 550
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 220/425 (51%), Gaps = 14/425 (3%)
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
FS+N L+ YA + +Y R+F G PD++TFP V + CG ++ GK++H
Sbjct: 72 FSYNTLLSSYAVCDKPRMTIFVY-RVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
V + G+ D+ V N+L+ Y CG+ A VFD MP RD +SW +I+G+ G Y +
Sbjct: 131 TVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
L F M V+P+ T + +S VG LG+ +HG ++K + N LI
Sbjct: 191 ALDTFSKMD---VEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME-AEGSMPDEI 400
MY+ + VF ++ KD VSW +MIS ++A+E + MM+ + G PD
Sbjct: 248 MYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGH 307
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+ SVLSACA LG +D G +H+ + G+ I ++DMY+KC I+ AL++F+ I
Sbjct: 308 ILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGI 367
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK 519
KNV +W +++ GL ++ E+L +F +M+ L KPN VT ++IL+AC G + G+
Sbjct: 368 RRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGR 427
Query: 520 ----EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTG 573
++ + + + L+D++ R G + A + + DV +L+
Sbjct: 428 RYFHKMKTREYNLSPKLEHY--GCLIDLFCRAGLLDEALELIKAMPVKPDVRICGAVLSA 485
Query: 574 YAERG 578
RG
Sbjct: 486 CKSRG 490
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 199/414 (48%), Gaps = 10/414 (2%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P +L L+ K++ +I D +N ++T K D V +
Sbjct: 7 PVLLELISRCSSLRVFKQIQTQLISRDILRDELFINKVVTFLGKSADFATYSSVILHSIR 66
Query: 261 R--DRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
S+N ++S Y + + ++ + PD T V A + G+
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG V KMGF DD+ V N L+ Y G KVF +M +DVVSWT +I+ + +
Sbjct: 127 QIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTG 186
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
L +A++T+ M+ E P+ T L + +G L LG +H L ++ + + N
Sbjct: 187 LYKEALDTFSKMDVE---PNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LK 496
LIDMY KC+ + A+ VF ++ K+ +SW S+I GL RS EA+ F M + +K
Sbjct: 244 ALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIK 303
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
P+ L S+LSACA +GA+ G+ +H + L G+ +D + A++DMY +CG ++ A
Sbjct: 304 PDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKI 363
Query: 557 FNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMID--SKGNWRKLMGLFRKC 607
FN R +V WN LL G A G G + +F +M+ K N + + C
Sbjct: 364 FNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNAC 417
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
+ C G EG +H V+K + + + N+ + + G+ +A VF +M RD+
Sbjct: 114 KACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVV 173
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SW +I G+ + G + EAL + +M V+P++ T+ C L + G V L GK +H
Sbjct: 174 SWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATYVCALVSSGRVGCLSLGKGIHGL 229
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+++ ++ NALI MYVKC L A VF + K+D++SWN+MISG +
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEA 289
Query: 283 LMLFIMMREVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF MM+ + PD L+SV+SA +G GR VH YV+ G D + ++
Sbjct: 290 IELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVD 349
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G E K+F+ + K+V +W ++ +++ ++ M G P+ +T
Sbjct: 350 MYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVT 409
Query: 402 IASVLSACACLGNLDLGIK-LHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
++L+AC G +D G + H++ R L + LID++ + +D+ALE+
Sbjct: 410 FLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKA 469
Query: 460 IPDK 463
+P K
Sbjct: 470 MPVK 473
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 44/308 (14%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H ++ K S +S+ GNA + M+VK L A VFG++ +D SWN +I G
Sbjct: 223 GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVH 282
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+EA+ L+ M G+KPD + VL C + + G+ VH +V+ G + D
Sbjct: 283 CERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTH 342
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ A++ MY KCG + A +F+G+ +++ +WNA++ G +G + L F M ++
Sbjct: 343 IGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLG 402
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P+ +T ++++A C+ G +EG
Sbjct: 403 FKPNLVTFLAILNA---------------------------CCHT--------GLVDEGR 427
Query: 354 KVFSRMESKD------VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
+ F +M++++ + + +I + + L D+A+E + M + PD +VLS
Sbjct: 428 RYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVK---PDVRICGAVLS 484
Query: 408 ACACLGNL 415
AC G L
Sbjct: 485 ACKSRGTL 492
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHSVVS 122
NS ++ L +A++ MQ + I D L +++ C D G ++H V
Sbjct: 274 NSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVL 333
Query: 123 KTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
+G A + M+ K G + A +F + +++F+WN L+GG A G E+L
Sbjct: 334 SAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLR 393
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTC--GGVPDLKRGKEVHVHVIRFGYEADVDVVNALIT 240
++ M + G KP++ TF +L C G+ D R + + ++ LI
Sbjct: 394 YFEEMVKL-GFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLID 452
Query: 241 MYVKCGDLVRARLVFDGMP-KRDRISWNAMISGYFENGEYMK 281
++ + G L A + MP K D A++S G M+
Sbjct: 453 LFCRAGLLDEALELIKAMPVKPDVRICGAVLSACKSRGTLME 494
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 262/509 (51%), Gaps = 15/509 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG EQALK MQ I + ++ ++G+ +H++V K+ ++ +
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN+ ++M+ K + A VF M +R+ SWN +I G+ G EA L+ RM + G
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM-RLEG 289
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VK F V++ C + ++ K++H VI+ G + D+++ AL+ Y KC ++ A
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349
Query: 253 LVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F M ++ +SW A+ISGY +NG + + LF MR V P+ T S++++A+ V
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV 409
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++H V+K + + SV L Y G+ E K+F ++ KD+V+W+ M+
Sbjct: 410 SPS----QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC-LGNLDLGIKLHQLAMRTGL 430
S Y + AV+ + + EG P+E T +SVL+ACA +++ G + H ++++G
Sbjct: 466 SGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF 525
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + +++ L+ MY+K I+ A EVF + D++++SW S+I G + ++L F +
Sbjct: 526 SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEE 585
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVR 546
M NL+ + +T + ++SAC G + G+ ++ I + + + ++D+Y R
Sbjct: 586 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY--SCMVDLYSR 643
Query: 547 CGRMKPAWNQFNSNERDVSA--WNILLTG 573
G ++ A + N A W LL
Sbjct: 644 AGMLEKAMDLINKMPFPAGATIWRTLLAA 672
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 271/531 (51%), Gaps = 9/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L E N ++AL ++ D +L ++++C G +H K
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +G + + M++K + VF +M +++ SW L+ GY + G ++AL L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + G+KP+ +TF VL +++G +VH VI+ G ++ + V N+++ MY
Sbjct: 181 FSQM-QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYS 239
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
K + A+ VFD M R+ +SWN+MI+G+ NG ++ LF MR V ++
Sbjct: 240 KSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFAT 299
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES-K 362
VI + + +++H VIK G D+++ L+ Y ++ K+F M +
Sbjct: 300 VIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
+VVSWT +IS Y + D+A+ + M EG P+ T +++L+A A + ++H
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS----PSQIH 415
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL-RLNNRS 481
L ++T + + L D YSK ++A ++F I +K++++W++++ G ++ +
Sbjct: 416 ALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIE 475
Query: 482 FEALIFFRKMMLNLKPNSVTLVSILSACAR-IGALMCGKEIHAHALRIGVAFDGFLPNAL 540
IF + ++PN T S+L+ACA ++ GK+ H+ +++ G + + +AL
Sbjct: 476 GAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSAL 535
Query: 541 LDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ MY + G ++ A F +RD+ +WN +++GYA+ G G + + F +M
Sbjct: 536 VTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 224/448 (50%), Gaps = 12/448 (2%)
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
H+ +F + + L N L+ +++ EAL+L+ + G D + CVL+ C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGL-RRSGSPTDGSSLSCVLKVC 102
Query: 208 GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWN 267
G + D GK+VH I+ G+ DV V +L+ MY+K + VFD M ++ +SW
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT 162
Query: 268 AMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKM 327
++++GY +NG + L LF M+ + P+ T ++V+ G + G +VH VIK
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Query: 328 GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
G + V N ++ MY + + VF ME+++ VSW +MI+ + + L +A E +
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKC 447
M EG + A+V+ CA + + +LH ++ G + I L+ YSKC
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 448 KCIDKALEVF---HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLV 503
ID A ++F H + +NV+SWT+II G N R+ A+ F +M ++PN T
Sbjct: 343 SEIDDAFKLFCMMHGV--QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYS 400
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN-SNER 562
+IL+A A + +IHA ++ + AL D Y + G A F +E+
Sbjct: 401 TILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEK 456
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKM 590
D+ AW+ +L+GYA+ G A + F ++
Sbjct: 457 DIVAWSAMLSGYAQMGDIEGAVKIFLQL 484
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 211/419 (50%), Gaps = 9/419 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +A + M+ + + + +++LC + LH V K
Sbjct: 263 NSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALS 182
S + + A + + K ++ A+ +F M +++ SW +I GY + G D A++
Sbjct: 323 NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMN 382
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
L+ +M GV+P+ +T+ +L V ++H V++ YE V AL Y
Sbjct: 383 LFCQM-RREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSY 437
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K GD A +F+ + ++D ++W+AM+SGY + G+ + +F+ + + V+P+ T S
Sbjct: 438 SKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFS 497
Query: 303 SVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV++A + + G++ H IK GFS+ + V + L+ MY GN E +VF R
Sbjct: 498 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 557
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+D+VSW +MIS Y K+++ ++ M ++ D IT V+SAC G ++ G +
Sbjct: 558 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 617
Query: 422 HQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L ++ ++ + + ++D+YS+ ++KA+++ +++P W +++ R++
Sbjct: 618 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 676
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 259/499 (51%), Gaps = 9/499 (1%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L R C R + LH+ + T H + L + + G L + VF D
Sbjct: 7 LFRTCSTLRRLTQ---LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPD 63
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG--VKPDVYTFPCVLRTCGGVPDLKRGKE 218
F ++VLI + F E LSL+ +G + + +P V+R GV +L G++
Sbjct: 64 SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRK 123
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
+H +++ G+ D + +L+ MY + L A+ VFD M RD + W+++IS Y ENG
Sbjct: 124 LHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGV 183
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y +GL +F M + PD + L SV A +G +L + VHGYV++ G D S+ N
Sbjct: 184 YREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNS 243
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
LI MY G +++F ++ + WT+MIS Y + ++A++ + M+ P+
Sbjct: 244 LIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPN 303
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVF 457
++T+ SVL++CA LG L G +H +R + ++ + + LID YS C + ++
Sbjct: 304 DVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLL 363
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
H I ++N++SW ++I + EA+ FF M+ + P+S +L S +SA A G++
Sbjct: 364 HSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQ 423
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
G++IH H ++ G FD F+ N+L+DMY +CG A+ FN + + AWN ++ G++
Sbjct: 424 FGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFS 482
Query: 576 ERGQGALAEEFFRKMIDSK 594
+ G A F +M ++
Sbjct: 483 QNGISVEALSLFDEMFKNR 501
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 242/486 (49%), Gaps = 19/486 (3%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ + M+ + G L A +F + DR W +I Y + F+EAL ++ +M
Sbjct: 240 LSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKM-QDS 298
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVR 250
V+P+ T VL +C + LK GK VH V+R +D+ ALI Y C +
Sbjct: 299 EVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSS 358
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
+ + + +SWN +IS Y G + + F M + PD +L+S ISAS
Sbjct: 359 CEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASAS 418
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
G + G+++HG+V+K GF D+ V N L+ MY G +F++++ K +V+W M
Sbjct: 419 SGSIQFGQQIHGHVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCM 477
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I + + + +A+ + M +++T S + AC+ LG LD G +H + TG
Sbjct: 478 ICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGN 537
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ + I L+DMY+KC + A +VF I +K+V+SW+++I ++ + A F K
Sbjct: 538 QNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHK 597
Query: 491 MML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALLDMY 544
M+L N+KPN VT ++ILSAC G++ GK + + +R + G +PN +++D+
Sbjct: 598 MVLSNIKPNEVTFMNILSACRHAGSVKEGK-FYFNTMR---DYYGIVPNVEHFASIVDLL 653
Query: 545 VRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQ----GALAEEFFRKMIDSKGNWR 598
R G + A+ S V+A W LL G G+ +AEE D G +
Sbjct: 654 SRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYT 713
Query: 599 KLMGLF 604
L ++
Sbjct: 714 LLSNIY 719
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 7/412 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVR 131
N E+AL MQ+ + ++ +++++ C EG +H V+ M +
Sbjct: 282 NECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLD 341
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LG A + + + + + + ++ SWN LI YA+ G DEA++ + M
Sbjct: 342 LGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMV-AK 400
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ PD ++ + ++ G+++H HV++ G+ D V N+L+ MY KCG A
Sbjct: 401 GIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSA 459
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
+F+ + + ++WN MI G+ +NG ++ L LF M + ++ + +T S I A +
Sbjct: 460 YTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNL 519
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
G G+ +H +I G +D+ + L+ MY G+ + +KVF + K VVSW+TMI
Sbjct: 520 GYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMI 579
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT--G 429
+ + + A + M P+E+T ++LSAC G++ G K + MR G
Sbjct: 580 AAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEG-KFYFNTMRDYYG 638
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLNNR 480
++ + +++D+ S+ I+ A E+ I S W +++ G R+ R
Sbjct: 639 IVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGR 690
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 238/465 (51%), Gaps = 12/465 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + F K A+ VF +++ WN +I G + + L+ M G
Sbjct: 11 SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CNGFQ 69
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
KPD YT+ VL C + +L+ GK V VI+ G E DV V +++ +Y KCG + AR
Sbjct: 70 KPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEARE 128
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + +SW M+SGY ++ + L +F MR V+ + T++SVISA
Sbjct: 129 VFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSM 188
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES---KDVVSWTTM 370
+VH +V K GF D SV LI M G+ E+VF ++ +++V+ M
Sbjct: 189 VCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VM 246
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
++ + + P KA+ + M EG PDE ++ S+LS C L+LG ++H +++GL
Sbjct: 247 VTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDC---LNLGKQVHSYTLKSGL 303
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I + + ++L MYSKC ++++ +F +IP K+ W S+I G EA+ F +
Sbjct: 304 ILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSE 363
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M+ P+ TL ++L+ C+ + +L KEIH + LR G+ L +AL++ Y +CG
Sbjct: 364 MLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGS 423
Query: 550 MKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+K A ++ E D + + L++GY++ G FR M+ S
Sbjct: 424 LKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMS 468
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 244/481 (50%), Gaps = 11/481 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+ + ++ K G + A VF ++ + + SW V++ GY K+ AL +++ M GV
Sbjct: 111 TSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRH-SGV 169
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+ + T V+ CG + +VH V + G+ D V ALI+M K GD+ +
Sbjct: 170 EINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSER 229
Query: 254 VFDGMP--KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF+ + +R I N M++ + +N + K + LF M + ++PD ++ S++S + +
Sbjct: 230 VFEDLDDIRRQNIV-NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCL 288
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
LG++VH Y +K G D++V + L MY G+ EE +F + KD W +MI
Sbjct: 289 ---NLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMI 345
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S + +A+ + M EG+ PDE T+A+VL+ C+ L +L ++H +R G+
Sbjct: 346 SGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID 405
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + + L++ YSKC + A +V+ ++P+ + +S +S+I G + + + FR M
Sbjct: 406 RGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDM 465
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+++ +S + SIL A G ++HA+ +IG+ + + ++LL MY + G +
Sbjct: 466 VMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 525
Query: 551 KPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
+ F+ N D+ AW L+ YA+ G+ A + + M + K + +G+ C
Sbjct: 526 EDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSAC 585
Query: 608 Q 608
Sbjct: 586 S 586
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 246/520 (47%), Gaps = 9/520 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL+ M+ + ++ + +++ C E +H+ V K+ +L + A +
Sbjct: 156 SALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALI 215
Query: 138 SMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
SM K GD+ + VF + D R NV++ +++ +A+ L+ RM G+ PD
Sbjct: 216 SMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQ-EGLNPD 274
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
++ +L + L GK+VH + ++ G D+ V ++L TMY KCG L + +F
Sbjct: 275 EFSVCSLLSV---LDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQ 331
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+P +D W +MISG+ E G + + LF M + PD TL++V++ +
Sbjct: 332 EIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPR 391
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
+E+HGY ++ G + + + L+ Y G+ + KV+ R+ D VS +++IS Y
Sbjct: 392 SKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQ 451
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
L ++ M G D I+S+L A +LG ++H + GL + +
Sbjct: 452 HGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSV 511
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
++L+ MYSK I+ + F QI ++I+WT++I + ++ EAL + M
Sbjct: 512 GSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGF 571
Query: 496 KPNSVTLVSILSACARIGALMCGK-EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
KP+ VT V +LSAC+ G + G +++ G+ + ++D R GR++ A
Sbjct: 572 KPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAE 631
Query: 555 NQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
N N+ + D W LL G L + +K I+
Sbjct: 632 NFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIE 671
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 182/372 (48%), Gaps = 14/372 (3%)
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
F YE V ++LI + K A VF + WN +I+G N Y L
Sbjct: 4 FFYEV---VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60
Query: 286 FIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLS 345
F M PD T SSV++A + + + G+ V VIK G ++DV VC ++ +Y
Sbjct: 61 FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAK 119
Query: 346 FGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASV 405
G+ E +VFSR+ + VVSWT M+S Y S A+E ++ M G + T+ SV
Sbjct: 120 CGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSV 179
Query: 406 LSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD--- 462
+SAC + ++H ++G +A LI M SK I+ + VF + D
Sbjct: 180 ISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRR 239
Query: 463 KNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI 521
+N+++ ++ N + +A+ F +M+ L P+ ++ S+LS + L GK++
Sbjct: 240 QNIVN--VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQV 294
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQG 580
H++ L+ G+ D + ++L MY +CG ++ +++ F +D + W +++G+ E G
Sbjct: 295 HSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYL 354
Query: 581 ALAEEFFRKMID 592
A F +M+D
Sbjct: 355 REAIGLFSEMLD 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 159/374 (42%), Gaps = 39/374 (10%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G L +A+ M + DE L ++ +C +H + + LG
Sbjct: 352 GYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLG 411
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
+A ++ + K G L A V+ ++ + D S + LI GY++ G + L++ M + G
Sbjct: 412 SALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMV-MSGF 470
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D Y +L+ + + G +VH ++ + G + V ++L+TMY K G +
Sbjct: 471 SMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCK 530
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
F + D I+W A+I+ Y ++G+ + L ++ +M+E PD +T V+SA
Sbjct: 531 AFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACS---- 586
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMY-LSFGNREEGEKVFSRMESKDVVSWTTMIS 372
HG +++ G+ N ++K Y + NR + M+
Sbjct: 587 -------HGGLVEEGYFH----LNSMVKDYGIEPENRH----------------YVCMVD 619
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR---TG 429
S + E + PD + ++L+AC G+++LG + A+ +
Sbjct: 620 ALGRS---GRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIELEPSD 676
Query: 430 LISYIIIANTLIDM 443
+Y+ ++N L ++
Sbjct: 677 AGAYVSLSNILAEV 690
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
G Y ++ ++LID +SK + A +VF NV W +II G L N+++ A+
Sbjct: 2 GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAG-ALRNQNYGAVFDL 60
Query: 489 RKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
M N KP+S T S+L+ACA + L GK + A ++ G A D F+ +++D+Y +
Sbjct: 61 FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAK 119
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG M A F+ + V +W ++L+GY + A E FR+M
Sbjct: 120 CGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREM 164
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 42/488 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A +F + + +L WN + G+A AL LY M +G + P+ Y+FP
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG-LLPNSYSFPF 70
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV------------- 249
+L++C L G+++H HV++ GY+ D+ V +LI+MY + G L
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 250 ------------------RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
AR +FD + +D +SWNAMISGY E + + L L+ M +
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR++H ++ GF ++ + N LI +Y G E
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F + KDV+SW T+I + L +A+ +Q M G P+++T+ SVL ACA
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF + +++ SW
Sbjct: 311 LGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWN 370
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIH---AHA 525
++I G ++ ++ A F KM N + P+ +T V +LSAC+ G L G+ I +
Sbjct: 371 AMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQD 430
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALA 583
+I + + ++D+ CG K A + E D W LL L
Sbjct: 431 YKITPKLEHY--GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELG 488
Query: 584 EEFFRKMI 591
E + + +I
Sbjct: 489 ESYAQNLI 496
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 206/451 (45%), Gaps = 36/451 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ LN ALK M L + + + L++ C + EG +H V K
Sbjct: 34 NTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLK 93
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR------------------------ 159
L + + + +SM+ + G L A VF + R
Sbjct: 94 LGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKL 153
Query: 160 -------DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
D+ SWN +I GY + F EAL LY+ M VKPD T V+ C
Sbjct: 154 FDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN-VKPDESTMVTVVSACAQSGS 212
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
++ G+++H + G+ +++ +VN LI +Y KCG++ A +F G+ K+D ISWN +I G
Sbjct: 213 IELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGG 272
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFS 330
+ Y + L+LF M P+ +T+ SV+ A +G +GR +H Y+ K G +
Sbjct: 273 HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVT 332
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ S+ LI MY G+ E ++VF M ++ + SW MI + + A + + M
Sbjct: 333 NASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKM 392
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLISYIIIANTLIDMYSKCKC 449
G PD+IT +LSAC+ G LDLG + ++ + + +ID+ C
Sbjct: 393 RKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGL 452
Query: 450 IDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+A E+ +P + + + W S++ +++N
Sbjct: 453 FKEAKEMIRTMPMEPDGVIWCSLLKACKMHN 483
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 33/272 (12%)
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F ++ +++ W TM + + A++ Y M + G +P+ + +L +CA
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 415 LDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
L G ++H ++ G + + +LI MY++ ++ A +VF + ++V+S+T++I G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 475 LR----LNN-RSF--------------------------EALIFFRKMM-LNLKPNSVTL 502
+NN R EAL ++ MM N+KP+ T+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 503 VSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NE 561
V+++SACA+ G++ G+++H+ G + + N L+D+Y +CG ++ A F +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ G+ A F++M+ S
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRS 292
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,375,470,100
Number of Sequences: 23463169
Number of extensions: 387991475
Number of successful extensions: 1272579
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7211
Number of HSP's successfully gapped in prelim test: 3170
Number of HSP's that attempted gapping in prelim test: 1074102
Number of HSP's gapped (non-prelim): 64234
length of query: 608
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 459
effective length of database: 8,863,183,186
effective search space: 4068201082374
effective search space used: 4068201082374
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)