BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007329
(608 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/529 (68%), Positives = 441/529 (83%)
Query: 66 RLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTM 125
+L+ LC NG LE+A+K L+SMQEL + VDED V LVRLCEWKR +EG ++S+ +M
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 126 SHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
S L V LGNAFL+MFV+FG+L AWYVFGKM +R+LFSWNVL+GGYAK G+FDEA+ LY
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
RM WVGGVKPDVYTFPCVLRTCGG+PDL RGKEVHVHV+R+GYE D+DVVNALITMYVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVI 305
GD+ ARL+FD MP+RD ISWNAMISGYFENG +GL LF MR + VDPD MTL+SVI
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 306 SASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
SA EL+GD +LGR++H YVI GF+ D+SVCN L +MYL+ G+ E EK+FSRME KD+V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
SWTTMIS YE + LPDKA++TY+MM+ + PDEIT+A+VLSACA LG+LD G++LH+LA
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL 485
++ LISY+I+AN LI+MYSKCKCIDKAL++FH IP KNVISWTSII GLRLNNR FEAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 486 IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
IF R+M + L+PN++TL + L+ACARIGALMCGKEIHAH LR GV D FLPNALLDMYV
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 546 RCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
RCGRM AW+QFNS ++DV++WNILLTGY+ERGQG++ E F +M+ S+
Sbjct: 545 RCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR 593
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 4/409 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + L+ +M+ L++ D L +++ CE G +H+ V T + + +
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
N+ M++ G A +F +M +D+ SW +I GY D+A+ Y RM
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDS 393
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKPD T VL C + DL G E+H I+ + V V N LI MY KC + +A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F +P+++ ISW ++I+G N + L+ M+ L P+ +TL++ ++A +G
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTL-QPNAITLTAALAACARIG 512
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
G+E+H +V++ G D + N L+ MY+ G F+ + KDV SW +++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLT 571
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y VE + M PDEIT S+L C+ + G+ G+
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
+ ++D+ + + +A + ++P + W +++ R++++
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK 680
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 306/565 (54%), Gaps = 12/565 (2%)
Query: 34 PKTRHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICV 93
P+ R S + N S+ + P+ +L C +G L +A + LD + E N V
Sbjct: 24 PRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKL--ACFDGVLTEAFQRLD-VSENNSPV 80
Query: 94 DEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYV 152
+ A ++ LC +R +G LHS + KT + L + M+ K G L A V
Sbjct: 81 E--AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKV 138
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F +M DR F+WN +IG Y G AL+LY M V GV + +FP +L+ C + D
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRD 197
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR-DRISWNAMIS 271
++ G E+H +++ GY + +VNAL++MY K DL AR +FDG ++ D + WN+++S
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FS 330
Y +G+ ++ L LF M P+ T+ S ++A + KLG+E+H V+K S
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
++ VCN LI MY G + E++ +M + DVV+W ++I Y +++ +A+E + M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCI 450
A G DE+++ S+++A L NL G++LH ++ G S + + NTLIDMYSKC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 451 DKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSAC 509
F ++ DK++ISWT++I G N+ EAL FR + ++ + + L SIL A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ + +++ KEIH H LR G+ D + N L+D+Y +C M A F S +DV +W
Sbjct: 498 SVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 569 ILLTGYAERGQGALAEEFFRKMIDS 593
+++ A G + A E FR+M+++
Sbjct: 557 SMISSSALNGNESEAVELFRRMVET 581
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 6/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG AL +M+ + + + L++ C R G LHS++ K
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
H + + NA +SM+ K DL A +F ++ D WN ++ Y+ +G E L
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITM 241
L++ M G P+ YT L C G K GKE+H V++ + +++ V NALI M
Sbjct: 271 LFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y +CG + +A + M D ++WN++I GY +N Y + L F M D +++
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+S+I+AS + + G E+H YVIK G+ ++ V N LI MY + F RM
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD++SWTT+I+ Y + +A+E ++ + + DE+ + S+L A + L ++ + ++
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H +R GL+ +I N L+D+Y KC+ + A VF I K+V+SWTS+I LN
Sbjct: 510 HCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
EA+ FR+M+ L +SV L+ ILSA A + AL G+EIH + LR G +G + A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 541 LDMYVRCGRMKPAWNQFNSNERD-VSAWNILLTGYAERGQGALAEEFFRKM 590
+DMY CG ++ A F+ ER + + ++ Y G G A E F KM
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 218/464 (46%), Gaps = 15/464 (3%)
Query: 42 KNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNL 101
K Q+ ++L N + + T N S + N ++AL++ M DE ++ ++
Sbjct: 335 KMPQAERILRQMNNADVVTWN--SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 102 VRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDL 161
+ G+ LH+ V K ++++GN + M+ K + F +M D+DL
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 162 FSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHV 221
SW +I GYA+ EAL L+ R ++ D +LR + + KE+H
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELF-RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 222 HVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMK 281
H++R G D + N L+ +Y KC ++ A VF+ + +D +SW +MIS NG +
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 282 GLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF M E + D + L ++SA+ + GRE+H Y+++ GF + S+ ++
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY G+ + + VF R+E K ++ +T+MI+ Y AVE + M E PD I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 402 IASVLSACACLGNLDLG-----IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
++L AC+ G LD G I H+ + Y+ L+DM + C+ +A E
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAFEF 746
Query: 457 FHQIPDKNVIS-WTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+ + W +++ R ++ I ++ +L L+P +
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR-LLELEPKN 789
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 298 bits (763), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 293/544 (53%), Gaps = 9/544 (1%)
Query: 55 TSSI--ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYD 112
TSS+ +TK NS +N L +G +Q L SM + D +L++ C +
Sbjct: 4 TSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLS 63
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
GL +H V + ++ ++++ KFG L HA VF +M +RD+ W +IG Y+
Sbjct: 64 FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS 123
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
+AG EA SL M + G+KP T +L GV ++ + + +H + +G++ D+
Sbjct: 124 RAGIVGEACSLVNEMRF-QGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDI 179
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V+N+++ +Y KC + A+ +FD M +RD +SWN MISGY G + L L MR
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ PD T + +S S + D ++GR +H ++K GF D+ + LI MYL G E
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+V + +KDVV WT MIS +KA+ + M GS IASV+++CA L
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
G+ DLG +H +R G N+LI MY+KC +DK+L +F ++ +++++SW +II
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 473 LGLRLNNRSFEALIFFRKMMLNL--KPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
G N +AL+ F +M + +S T+VS+L AC+ GAL GK IH +R +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ AL+DMY +CG ++ A F+S + +DV +W IL+ GY G+G +A E + +
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 590 MIDS 593
+ S
Sbjct: 540 FLHS 543
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 249/476 (52%), Gaps = 10/476 (2%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L+++ K +G A +F +M RD+ SWN +I GYA G E L L RM G+
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGL 241
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
+PD TF L G + DL+ G+ +H +++ G++ D+ + ALITMY+KCG +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
V + +P +D + W MISG G K L++F M + D ++SV+++ +G
Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGS 361
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG VHGYV++ G++ D N LI MY G+ ++ +F RM +D+VSW +IS
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISG 421
Query: 374 YEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y +V KA+ ++ M+ + D T+ S+L AC+ G L +G +H + +R+ +
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
++ L+DMYSKC ++ A F I K+V+SW +I G + + AL + + +
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALR-IGVAFDGFLPNALLDMYVRCGRM 550
+ ++PN V +++LS+C+ G + G +I + +R GV + ++D+ R R+
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 551 KPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK----GNWRKL 600
+ A+ + N + I+L G+ + + MI+ K G++ KL
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKL 657
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYV 152
VD +V+L++ C G +H +V ++ + A + M+ K G L A
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 153 FGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
F + +D+ SW +LI GY G D AL +Y F G++P+ F VL +C
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE-FLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 213 LKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+++G ++ ++R FG E + + + ++ + L RA+ + D
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDL------LCRAKRIEDA 604
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 259/457 (56%), Gaps = 3/457 (0%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+S+F ++G + A VF + + ++ ++ G+AK D+AL + RM + V+P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY-DDVEP 133
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
VY F +L+ CG +L+ GKE+H +++ G+ D+ + L MY KC + AR VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D MP+RD +SWN +++GY +NG L + M E + P F+T+ SV+ A +
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
+G+E+HGY ++ GF V++ L+ MY G+ E ++F M ++VVSW +MI Y
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P +A+ +Q M EG P ++++ L ACA LG+L+ G +H+L++ GL +
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LN 494
+ N+LI MY KCK +D A +F ++ + ++SW ++ILG N R +AL +F +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
+KP++ T VS+++A A + K IH +R + + F+ AL+DMY +CG + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 555 NQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ +ER V+ WN ++ GY G G A E F +M
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 248/484 (51%), Gaps = 7/484 (1%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L++AL++ M+ ++ L+++C + G +H ++ K+ L +
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+M+ K + A VF +M +RDL SWN ++ GY++ G AL + + M +KP
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKP 234
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
T VL + + GKE+H + +R G+++ V++ AL+ MY KCG L AR +F
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
DGM +R+ +SWN+MI Y +N + +++F M + V P +++ + A +GD +
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
GR +H +++G +VSV N LI MY + +F +++S+ +VSW MI +
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ P A+ + M + PD T SV++A A L +H + MR+ L +
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-N 494
+ L+DMY+KC I A +F + +++V +W ++I G + AL F +M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 495 LKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+KPN VT +S++SAC+ G + G + + I ++ D + A++D+ R GR+
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY--GAMVDLLGRAGRLN 592
Query: 552 PAWN 555
AW+
Sbjct: 593 EAWD 596
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 217/405 (53%), Gaps = 13/405 (3%)
Query: 193 VKPDVYTFPC--VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ +VY P +L C + +L+ ++ V + G + L++++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A VF+ + + + ++ M+ G+ + + K L F+ MR V+P + ++ ++
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL---KV 144
Query: 311 VGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
GDE ++G+E+HG ++K GFS D+ L MY E KVF RM +D+VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T+++ Y + + A+E + M E P ITI SVL A + L + +G ++H AMR
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+G S + I+ L+DMY+KC ++ A ++F + ++NV+SW S+I N EA++
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F+KM+ +KP V+++ L ACA +G L G+ IH ++ +G+ + + N+L+ MY +
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
C + A + F R + +WN ++ G+A+ G+ A +F +M
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 191/403 (47%), Gaps = 2/403 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG AL+ + SM E N+ +V+++ R G +H ++ V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A + M+ K G L A +F M +R++ SWN +I Y + EA+ ++Q+M G
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML-DEG 332
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
VKP + L C + DL+RG+ +H + G + +V VVN+LI+MY KC ++ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+F + R +SWNAMI G+ +NG + L F MR V PD T SVI+A +
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG V++ +V V L+ MY G +F M + V +W MI
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y A+E ++ M+ P+ +T SV+SAC+ G ++ G+K + I
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 433 YIIIA-NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG 474
+ ++D+ + +++A + Q+P K ++ +LG
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 8/296 (2%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
R++ V K G + L+ ++ +G+ +E +VF ++SK V + TM+ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA++ + M + P +L C L +G ++H L +++G +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLK 496
L +MY+KC+ +++A +VF ++P+++++SW +I+ G N + AL + M NLK
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF--LPNALLDMYVRCGRMKPAW 554
P+ +T+VS+L A + + + GKEIH +A+R G FD + AL+DMY +CG ++ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSG--FDSLVNISTALVDMYAKCGSLETAR 291
Query: 555 NQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F+ ER+V +WN ++ Y + A F+KM+D K +MG C
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 142/272 (52%), Gaps = 2/272 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ N + ++A+ M + + + +++ + C + G ++H + +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V + N+ +SM+ K ++ A +FGK+ R L SWN +I G+A+ G +AL+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M VKPD +T+ V+ + K +H V+R + +V V AL+ MY
Sbjct: 426 FSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG ++ ARL+FD M +R +WNAMI GY +G L LF M++ + P+ +T S
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
VISA G + G + Y++K +S ++S+
Sbjct: 545 VISACSHSGLVEAGLKCF-YMMKENYSIELSM 575
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
E A +L C+ L L ++ L + GL L+ ++ + +D+A VF
Sbjct: 37 EHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMC 517
I K + + +++ G + +AL FF +M + ++P +L C L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GKEIH ++ G + D F L +MY +C ++ A F+ ERD+ +WN ++ GY++
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 577 RGQGALAEEFFRKMID 592
G +A E + M +
Sbjct: 214 NGMARMALEMVKSMCE 229
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 268/474 (56%), Gaps = 9/474 (1%)
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
KF A +FG+M R L+ WN L+ ++ ++E L + MF KPD +T P
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLP 64
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
L+ CG + ++ G+ +H V + +D+ V ++LI MY+KCG ++ A +FD + K
Sbjct: 65 VALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D ++W++M+SG+ +NG + + F M+ V PD +TL +++SA + + +LGR
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
VHG+VI+ GFS+D+S+ N L+ Y +E +F + KDV+SW+T+I+CY +
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+A+ + M +G+ P+ T+ VL ACA +L+ G K H+LA+R GL + + ++
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKP 497
L+DMY KC ++A VF +IP K+V+SW ++I G LN + ++ F M+L N +P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+++ +V +L +C+ +G L K H++ ++ G + F+ +L+++Y RCG + A F
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 558 NSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMIDS---KGNWRKLMGLFRKC 607
N +D W L+TGY G+G A E F M+ S K N + + C
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 239/462 (51%), Gaps = 4/462 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L L E+ L + M D L ++ C R + G +H V K
Sbjct: 29 NTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKK 88
Query: 124 TMSHLS-VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALS 182
++ S + +G++ + M++K G + A +F ++ D+ +W+ ++ G+ K G +A+
Sbjct: 89 DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVE 148
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++RM V PD T ++ C + + + G+ VH VIR G+ D+ +VN+L+ Y
Sbjct: 149 FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCY 208
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
K A +F + ++D ISW+ +I+ Y +NG + L++F M + +P+ T+
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V+ A D + GR+ H I+ G +V V L+ MY+ + EE VFSR+ K
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKL 421
DVVSW +IS + + + +++E + +M E + PD I + VL +C+ LG L+
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H ++ G S I +L+++YS+C + A +VF+ I K+ + WTS+I G ++ +
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 482 FEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEI 521
+AL F M+ + +KPN VT +SILSAC+ G + G I
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 73 NGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NGS QA+++ M ++ D L+ LV C G +H V + +
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L N+ L+ + K A +F + ++D+ SW+ +I Y + G EAL ++ M
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM-DD 258
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P+V T CVL+ C DL++G++ H IR G E +V V AL+ MY+KC A
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASEL 310
VF +P++D +SW A+ISG+ NG + + F IM+ E PD + + V+ +
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+G + + H YVIK GF + + L+++Y G+ KVF+ + KD V WT++
Sbjct: 379 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 371 ISCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
I+ Y KA+ET+ M+++ P+E+T S+LSAC+ G + G+++ +L +
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN-- 496
Query: 430 LISYIIIAN-----TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
Y + N L+D+ + +D A+E+ ++P S T ILG L
Sbjct: 497 --DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP----FSPTPQILGTLL 543
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 288/544 (52%), Gaps = 6/544 (1%)
Query: 50 LNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKR 109
+++ T + + N++L C +G+LE A+K L + +I D L ++++LC +
Sbjct: 51 VDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSK 108
Query: 110 GYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIG 169
+G + + + + LG+ M+ GDL A VF ++ WN+L+
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 170 GYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE 229
AK+G F ++ L+++M GV+ D YTF CV ++ + + G+++H +++ G+
Sbjct: 169 ELAKSGDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 227
Query: 230 ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMM 289
V N+L+ Y+K + AR VFD M +RD ISWN++I+GY NG KGL +F+ M
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
++ D T+ SV + LGR VH +K FS + CN L+ MY G+
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ + VF M + VVS+T+MI+ Y L +AV+ ++ ME EG PD T+ +VL+ C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LD G ++H+ L I ++N L+DMY+KC + +A VF ++ K++ISW
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+II G N + EAL F ++ P+ T+ +L ACA + A G+EIH + +R
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
G D + N+L+DMY +CG + A F+ +D+ +W +++ GY G G A
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 587 FRKM 590
F +M
Sbjct: 588 FNQM 591
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 262/537 (48%), Gaps = 12/537 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N +NEL +G ++ M + +D + + R G LH + K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GN+ ++ ++K + A VF +M +RD+ SWN +I GY G ++ LS+
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M V G++ D+ T V C + G+ VH ++ + + N L+ MY
Sbjct: 284 FVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCGDL A+ VF M R +S+ +MI+GY G + + LF M E + PD T+++
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V++ G+ VH ++ + D+ V N L+ MY G+ +E E VFS M KD
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLH 422
++SW T+I Y + ++A+ + ++ E PDE T+A VL ACA L D G ++H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
MR G S +AN+L+DMY+KC + A +F I K+++SWT +I G ++
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 483 EALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIGVAFDGFLPN 538
EA+ F +M ++ + ++ VS+L AC+ G + G I H +I + +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA-- 640
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++DM R G + A+ +F N D + W LL G LAE+ K+ +
Sbjct: 641 CIVDMLARTGDLIKAY-RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 219/439 (49%), Gaps = 5/439 (1%)
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
DR + N + + ++G + A+ L + G D T VL+ C LK GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
EV + G+ D ++ + L MY CGDL A VFD + + WN +++ ++G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
++ + LF M V+ D T S V + + G ++HG+++K GF + SV N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP 397
L+ YL + KVF M +DV+SW ++I+ Y + L +K + + M G
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D TI SV + CA + LG +H + ++ NTL+DMYSKC +D A VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
++ D++V+S+TS+I G + EA+ F +M + P+ T+ ++L+ CAR L
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
GK +H + FD F+ NAL+DMY +CG M+ A F+ +D+ +WN ++ GY+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 576 ERGQGALAEEFFRKMIDSK 594
+ A F +++ K
Sbjct: 475 KNCYANEALSLFNLLLEEK 493
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 282 bits (721), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 255/455 (56%), Gaps = 9/455 (1%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A +F +M D F WNV+I G+ G + EA+ Y RM + GVK D +T+P V+++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF-AGVKADTFTYPFVIKSVA 141
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
G+ L+ GK++H VI+ G+ +DV V N+LI++Y+K G A VF+ MP+RD +SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
MISGY G+ LMLF M + PD + S + A V K+G+E+H + ++
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 329 F-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETY 387
+ DV V ++ MY +G E++F+ M +++V+W MI CY + A +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 388 QMM-EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK 446
Q M E G PD IT ++L A A L G +H AMR G + ++++ LIDMY +
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 447 CKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSI 505
C + A +F ++ +KNVISW SII N +++ AL F+++ +L P+S T+ SI
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDV 564
L A A +L G+EIHA+ ++ + + N+L+ MY CG ++ A FN +DV
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMIDSKGNWRK 599
+WN ++ YA G G ++ F +MI S+ N K
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 222/412 (53%), Gaps = 8/412 (1%)
Query: 112 DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGY 171
+EG +H++V K V + N+ +S+++K G A VF +M +RD+ SWN +I GY
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 172 AKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-A 230
G +L L++ M G KPD ++ L C V K GKE+H H +R E
Sbjct: 207 LALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
DV V+ +++ MY K G++ A +F+GM +R+ ++WN MI Y NG + F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 291 EVL-VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
E + PD +T +++ AS ++ GR +HGY ++ GF + + LI MY G
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ E +F RM K+V+SW ++I+ Y + A+E +Q + +PD TIAS+L A
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A +L G ++H +++ S II N+L+ MY+ C ++ A + F+ I K+V+SW
Sbjct: 442 AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWN 501
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKE 520
SII+ ++ ++ F +M+ + + PN T S+L+AC+ G + G E
Sbjct: 502 SIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 133/249 (53%), Gaps = 3/249 (1%)
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E+ ++F M D W MI + L +AV+ Y M G D T V+ +
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A + +L+ G K+H + ++ G +S + + N+LI +Y K C A +VF ++P+++++SW
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 470 SIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
S+I G F +L+ F++M+ KP+ + +S L AC+ + + GKEIH HA+R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 529 GVAF-DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEF 586
+ D + ++LDMY + G + A FN +R++ AWN+++ YA G+ A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 587 FRKMIDSKG 595
F+KM + G
Sbjct: 321 FQKMSEQNG 329
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 2/197 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG AL+ + + ++ D + +++ EG +H+ + K
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + + N+ + M+ GDL A F + +D+ SWN +I YA GF ++ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR-FGYEADVDVVNALITMY 242
+ M V P+ TF +L C + G E + R +G + ++ ++ +
Sbjct: 520 FSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 243 VKCGDLVRARLVFDGMP 259
+ G+ A+ + MP
Sbjct: 579 GRTGNFSAAKRFLEEMP 595
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 261/482 (54%), Gaps = 13/482 (2%)
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
L+ VVSK + ++ + ++++ G++ A + F + +RD+++WN++I GY +A
Sbjct: 73 LHARLVVSKQIQNVCI--SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 175 GFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDV 234
G E + + G+ PD TFP VL+ C V D G ++H ++FG+ DV V
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 235 VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
+LI +Y + + AR++FD MP RD SWNAMISGY ++G + L L +R +
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
D +T+ S++SA GD G +H Y IK G ++ V N LI +Y FG + +K
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
VF RM +D++SW ++I YE + P +A+ +Q M PD +T+ S+ S + LG+
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 415 LDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+ + +R G + I I N ++ MY+K +D A VF+ +P+ +VISW +II
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 474 GLRLNNRSFEALIFFRKMML--NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G N + EA+ + M + N T VS+L AC++ GAL G ++H L+ G+
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERGQGALAEEFFRKM 590
D F+ +L DMY +CGR++ A + F R S WN L+ + G G A F++M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 591 ID 592
+D
Sbjct: 544 LD 545
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 254/484 (52%), Gaps = 18/484 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G +H + K V + + + ++ ++ +G+A +F +M RD+ SWN +I GY
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 173 KAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
++G EAL+L G D T +L C D RG +H + I+ G E+++
Sbjct: 228 QSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
V N LI +Y + G L + VFD M RD ISWN++I Y N + ++ + LF MR
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREE 351
+ PD +TL S+ S +GD + R V G+ ++ G F +D+++ N ++ MY G +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACA 410
VF+ + + DV+SW T+IS Y + +A+E Y +ME EG + ++ T SVL AC+
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
G L G+KLH ++ GL + + +L DMY KC ++ AL +F+QIP N + W +
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 471 IILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHAL 526
+I + +A++ F++M+ +KP+ +T V++LSAC+ G + G+ E+
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQ---GA 581
I + + ++DMY R G+++ A S + D S W LL+ G G
Sbjct: 583 GITPSLKHY--GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
Query: 582 LAEE 585
+A E
Sbjct: 641 IASE 644
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 211/416 (50%), Gaps = 23/416 (5%)
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
DV+T + R C +L+ K +H ++ +V + L+ +Y G++ AR F
Sbjct: 56 DVHT---LFRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDE 314
D + RD +WN MISGY G + + F + M + PD+ T SV+ A V D
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID- 168
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++H +K GF DV V LI +Y + +F M +D+ SW MIS Y
Sbjct: 169 --GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S +A+ + A D +T+ S+LSAC G+ + G+ +H +++ GL S +
Sbjct: 227 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
++N LID+Y++ + +VF ++ +++ISW SII LN + A+ F++M L+
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKP 552
++P+ +TL+S+ S +++G + + + LR G + + NA++ MY + G +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 553 AWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMID------SKGNWRKLM 601
A FN DV +WN +++GYA+ G + A E + M + ++G W ++
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 212/422 (50%), Gaps = 15/422 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ C +G+ ++AL + ++ + D +V+L+ C ++ G+ +HS K
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N + ++ +FG L VF +M RDL SWN +I Y A+SL
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M + ++PD T + + D++ + V +R G + D+ + NA++ MY
Sbjct: 336 FQEMR-LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTL 301
K G + AR VF+ +P D ISWN +ISGY +NG + + ++ IM E + + T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SV+ A G + G ++HG ++K G DV V L MY G E+ +F ++
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
+ V W T+I+C+ +KAV ++ M EG PD IT ++LSAC+ G +D G
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 422 HQLAMRT--GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSIILGLR 476
++ M+T G+ + ++DMY + ++ AL+ + PD ++ W +++ R
Sbjct: 575 FEM-MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSACR 631
Query: 477 LN 478
++
Sbjct: 632 VH 633
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 249/460 (54%), Gaps = 6/460 (1%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVP 211
+F + D + WN +I GY +AG EAL + M G+ PD Y+F L+ C G
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 212 DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMIS 271
D K+G +H + G E+DV + AL+ MY K DLV AR VFD M +D ++WN M+S
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSD 331
G +NG L+LF MR VD D ++L ++I A + + R +HG VIK GF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 332 DVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
S + LI MY + + E VF + KD SW TM++ Y + ++ +E + +M
Sbjct: 235 AFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
+++ AS L A A +G+L GI +H A++ GLI + +A +L+ MYSKC ++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACA 510
A ++F I D++V+SW+++I + EA+ FR MM +++KPN+VTL S+L CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 511 RIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNI 569
+ A GK IH +A++ + + A++ MY +CGR PA F +D A+N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 570 LLTGYAERGQGALAEEFFR--KMIDSKGNWRKLMGLFRKC 607
L GY + G A + ++ K+ + R ++G+ + C
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 271/550 (49%), Gaps = 8/550 (1%)
Query: 48 QVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEW 107
QV + + + T N + ++ L NG AL M+ + +D +L NL+
Sbjct: 156 QVFDKMHVKDVVTWN--TMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
D LH +V K + + M+ DL A VF ++ +D SW +
Sbjct: 214 LEKSDVCRCLHGLVIK--KGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTM 271
Query: 168 IGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG 227
+ YA GFF+E L L+ M V+ + L+ V DL +G +H + ++ G
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYD-VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 228 YEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI 287
DV V +L++MY KCG+L A +F + RD +SW+AMI+ Y + G++ + + LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M + + P+ +TL+SV+ V +LG+ +H Y IK ++ +I MY G
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Query: 348 NREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLS 407
K F R+ KD V++ + Y +KA + Y+ M+ G PD T+ +L
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVI 466
CA + G ++ ++ G S +A+ LI+M++KC + A+ +F + +K+ +
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV 570
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW ++ G L+ ++ EA+ FR+M + +PN+VT V+I+ A A + AL G +H+
Sbjct: 571 SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAE 584
++ G + N+L+DMY +CG ++ + F + + + +WN +L+ YA G + A
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 585 EFFRKMIDSK 594
F M +++
Sbjct: 691 SLFLSMQENE 700
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 237/451 (52%), Gaps = 3/451 (0%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E+ L+ D M+ ++ +++ A + ++ + +G+ +H + V +
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
+ +SM+ K G+L A +F + DRD+ SW+ +I Y +AG DEA+SL++ M +
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH- 396
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+KP+ T VL+ C GV + GK +H + I+ E++++ A+I+MY KCG A
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F+ +P +D +++NA+ GY + G+ K ++ M+ V PD T+ ++
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSWTTMI 371
D G V+G +IK GF + V + LI M+ +F + K VSW M+
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y ++AV T++ M+ E P+ +T +++ A A L L +G+ +H ++ G
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
S + N+L+DMY+KC I+ + + F +I +K ++SW +++ + + A+ F M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEI 521
N LKP+SV+ +S+LSAC G + GK I
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 4/408 (0%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++A+ M ++I + L ++++ C G +H K +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
A +SM+ K G A F ++ +D ++N L GY + G ++A +Y+ M + GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHGV 498
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T +L+TC D RG V+ +I+ G++++ V +ALI M+ KC L A +
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
+FD ++ +SWN M++GY +G+ + + F M+ P+ +T +++ A+ +
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
++G VH +I+ GF V N L+ MY G E EK F + +K +VSW TM+S
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL-HQLAMRTGLI 431
Y L AV + M+ PD ++ SVLSAC G ++ G ++ ++ R +
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS-WTSIILGLRLN 478
+ + ++D+ K +A+E+ ++ K + W +++ R++
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 13/396 (3%)
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+VH +I G + ++NA +++ + DL +R++FD + + WN+MI GY G
Sbjct: 23 QVHGSLIVSGLKPHNQLINAY-SLFQR-QDL--SRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 278 EYMKGLMLF-IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ + L F M E +DPD + + + A D K G +H + +MG DV +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L++MY + +VF +M KDVV+W TM+S + A+ + M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
D +++ +++ A + L D+ LH L ++ G I ++ LIDMY C + A V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGA 514
F ++ K+ SW + ++ +N FE ++ +M N ++ N V S L A A +G
Sbjct: 257 FEEVWRKDESSWGT-MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTG 573
L+ G IH +A++ G+ D + +L+ MY +CG ++ A F N +RDV +W+ ++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 574 YAERGQGALAEEFFRKM--IDSKGNWRKLMGLFRKC 607
Y + GQ A FR M I K N L + + C
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 247/472 (52%), Gaps = 12/472 (2%)
Query: 133 GNAFLSMFVKFGDLGHAWY---VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
G+ ++ V + GH Y +F +M L S+N++I Y + G + +A+S++ RM
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV- 107
Query: 190 VGGVK--PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
GVK PD YT+P V + G + +K G VH ++R + D V NAL+ MY+ G
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
+ AR VFD M RD ISWN MISGY+ NG LM+F M VD D T+ S++
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ D ++GR VH V + D + V N L+ MYL G +E VF RME +DV++W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T MI+ Y + A+E ++M+ EG P+ +TIAS++S C ++ G LH A+R
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ S III +LI MY+KCK +D VF + W++II G N +AL
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 488 FRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
F++M +++PN TL S+L A A + L IH + + G L+ +Y +
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 547 CGRMKPAWNQFNS-----NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
CG ++ A FN +DV W L++GY G G A + F +M+ S
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 249/509 (48%), Gaps = 25/509 (4%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL +H + ++ + NA L+M++ FG + A VF M +RD+ SWN +I GY +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ ++AL ++ M V D T +L CG + DL+ G+ VH V ++
Sbjct: 196 NGYMNDALMMFDWMV-NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL+ MY+KCG + AR VFD M +RD I+W MI+GY E+G+ L L +M+
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ +T++S++S G+ +HG+ ++ D+ + LI MY +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 354 KVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VFS W+ +I+ C + ++ D A+ ++ M E P+ T+ S+L A A L
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSD-ALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD----KNVISW 468
+L + +H +TG +S + A L+ +YSKC ++ A ++F+ I + K+V+ W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI------ 521
++I G ++ AL F +M+ + + PN +T S L+AC+ G + G +
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQ 579
H L + ++D+ R GR+ A+N + E + W LL
Sbjct: 554 HYKTLARSNHY-----TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHEN 608
Query: 580 GALAE----EFFRKMIDSKGNWRKLMGLF 604
L E + F ++ GN+ L ++
Sbjct: 609 VQLGEMAANKLFELEPENTGNYVLLANIY 637
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 214/452 (47%), Gaps = 18/452 (3%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + AL D M ++ +D +V+++ +C + + G +H +V + + +
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA ++M++K G + A +VF +M RD+ +W +I GY + G + AL L R+ G
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC-RLMQFEG 314
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V+P+ T ++ CG + GK +H +R +D+ + +LI+MY KC +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF G K W+A+I+G +N L LF MR V+P+ TL+S++ A +
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS----RMESKDVVSWT 368
D + +H Y+ K GF + L+ +Y G E K+F+ + +SKDVV W
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+IS Y A++ + M G P+EIT S L+AC+ G ++ G+ L R
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL----FRF 550
Query: 429 GLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
L Y +A + ++D+ + +D+A + IP + + +L + + + +
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQ 610
Query: 484 ALIFFRKMMLNLKP----NSVTLVSILSACAR 511
+ L+P N V L +I +A R
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGR 642
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 262 bits (669), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 264/518 (50%), Gaps = 9/518 (1%)
Query: 81 KYLDSMQELNICVDEDALVNLVRLCEWKRG-YDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
K +DS++ I + L L+ C G DEG LHS + K + L
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
++ GDL A+ VF +M +R +F+WN +I A E L+ RM V P+ T
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGT 188
Query: 200 FPCVLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F VL C GG +++H ++ G V N LI +Y + G + AR VFDG+
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+D SW AMISG +N + + LF M + + P SSV+SA + + ++G
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
++HG V+K+GFS D VCN L+ +Y GN E +FS M +D V++ T+I+
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIAN 438
+KA+E ++ M +G PD T+AS++ AC+ G L G +LH + G S I
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKP 497
L+++Y+KC I+ AL+ F + +NV+ W +++ L + + FR+M + + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN-- 555
N T SIL C R+G L G++IH+ ++ + ++ + L+DMY + G++ AW+
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 556 -QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+F +DV +W ++ GY + A FR+M+D
Sbjct: 549 IRFAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 268/534 (50%), Gaps = 5/534 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M L I A +++ C+ + G LH +V K + NA +
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
S++ G+L A ++F M RD ++N LI G ++ G+ ++A+ L++RM + G++PD
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDS 389
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
T ++ C L RG+++H + + G+ ++ + AL+ +Y KC D+ A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
+ + WN M+ Y + +F M+ + P+ T S++ +GD +LG
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++H +IK F + VC+ LI MY G + + R KDVVSWTTMI+ Y
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
DKA+ T++ M G DE+ + + +SACA L L G ++H A +G S +
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLK 496
N L+ +YS+C I+++ F Q + I+W +++ G + + + EAL +F R +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 497 PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T S + A + + GK++HA + G + + NAL+ MY +CG + A Q
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
F + ++ +WN ++ Y++ G G+ A + F +MI S + N L+G+ C
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 6/453 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ +N L G E+A++ M + D + L +LV C G LH+ +K
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ ++ A L+++ K D+ A F + ++ WNV++ Y G D+ +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNS 474
Query: 184 YQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
++ R + + P+ YT+P +L+TC + DL+ G+++H +I+ ++ + V + LI M
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 534
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K G L A + +D +SW MI+GY + K L F M + + D + L
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
++ +SA + K G+++H GFS D+ N L+ +Y G EE F + E+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D ++W ++S ++ S ++A+ + M EG + T S + A + N+ G ++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H + +TG S + N LI MY+KC I A + F ++ KN +SW +II +
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 482 FEALIFFRKMML-NLKPNSVTLVSILSACARIG 513
EAL F +M+ N++PN VTLV +LSAC+ IG
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 215/434 (49%), Gaps = 4/434 (0%)
Query: 76 LEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA 135
L + + MQ I ++ ++++ C + G +HS + KT L+ + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ M+ K G L AW + + +D+ SW +I GY + F D+AL+ +++M G++
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRS 589
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D + C G+ LK G+++H G+ +D+ NAL+T+Y +CG + + L F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ D I+WNA++SG+ ++G + L +F+ M +D + T S + A+ + K
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G++VH + K G+ + VCN LI MY G+ + EK F + +K+ VSW +I+ Y
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYI 434
+A++++ M P+ +T+ VLSAC+ +G +D GI + GL
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNRSFEALIFFRKMML 493
++DM ++ + +A E ++P K + + W + +L + +++ E F +L
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT-LLSACVVHKNMEIGEFAAHHLL 888
Query: 494 NLKPNSVTLVSILS 507
L+P +LS
Sbjct: 889 ELEPEDSATYVLLS 902
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 262 bits (669), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 258/498 (51%), Gaps = 8/498 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
L S + K+ V +G + ++K G++ +A VF + ++ +W +I G K G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+L L+ ++ V PD Y VL C +P L+ GK++H H++R+G E D ++N
Sbjct: 230 SYVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
LI YVKCG ++ A +F+GMP ++ ISW ++SGY +N + + + LF M + + P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D SS++++ + G +VH Y IK +D V N LI MY + KVF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 357 SRMESKDVVSWTTMISCYE--GSVLP-DKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+ DVV + MI Y G+ +A+ ++ M P +T S+L A A L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
+L L ++H L + GL I + LID+YS C C+ + VF ++ K+++ W S+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 474 GLRLNNRSFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
G + + EAL F ++ L+ +P+ T ++++A + ++ G+E H L+ G+
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 533 DGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
+ ++ NALLDMY +CG + A F+S RDV WN +++ YA G+G A + KM+
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 592 DS--KGNWRKLMGLFRKC 607
+ N+ +G+ C
Sbjct: 649 SEGIEPNYITFVGVLSAC 666
Score = 245 bits (625), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 264/495 (53%), Gaps = 15/495 (3%)
Query: 109 RGYDEGLYLHSVVSKTMS----HLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
R D+ L+ +VV + L L N ++++ + G + +A VF KM +R+L SW
Sbjct: 54 RASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSW 113
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK----EVH 220
+ ++ G ++E+L ++ + P+ Y ++ C G+ RG+ ++
Sbjct: 114 STMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQ 171
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+++ G++ DV V LI Y+K G++ ARLVFD +P++ ++W MISG + G
Sbjct: 172 SFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 281 KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
L LF + E V PD LS+V+SA ++ + G+++H ++++ G D S+ N LI
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y+ G K+F+ M +K+++SWTT++S Y+ + L +A+E + M G PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
+S+L++CA L L G ++H ++ L + + N+LIDMY+KC C+ A +VF
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 461 PDKNVISWTSIILGL-RLNNR--SFEALIFFRKMMLNL-KPNSVTLVSILSACARIGALM 516
+V+ + ++I G RL + EAL FR M L +P+ +T VS+L A A + +L
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYA 575
K+IH + G+ D F +AL+D+Y C +K + F+ + +D+ WN + GY
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 576 ERGQGALAEEFFRKM 590
++ + A F ++
Sbjct: 532 QQSENEEALNLFLEL 546
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 246/513 (47%), Gaps = 7/513 (1%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
+L+ + E N+ D L ++ C + G +H+ + + + L N +
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
+VK G + A +F M ++++ SW L+ GY + EA+ L+ M G +KPD+Y
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMY 351
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
+L +C + L G +VH + I+ D V N+LI MY KC L AR VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 259 PKRDRISWNAMISGYFENG---EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
D + +NAMI GY G E + L +F MR L+ P +T S++ AS +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
L +++HG + K G + D+ + LI +Y + ++ VF M+ KD+V W +M + Y
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++A+ + ++ PDE T A++++A L ++ LG + H ++ GL
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
I N L+DMY+KC + A + F ++V+ W S+I + +AL KMM
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++PN +T V +LSAC+ G + G + LR G+ + ++ + R GR+ A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 555 NQFNSNERDVSA--WNILLTGYAERGQGALAEE 585
+A W LL+G A+ G LAE
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEH 744
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 203/406 (50%), Gaps = 5/406 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N ++A++ SM + + D A +++ C G +H+ K +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF---FDEALSLYQRMFW 189
N+ + M+ K L A VF D+ +N +I GY++ G EAL++++ M +
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P + TF +LR + L K++H + ++G D+ +ALI +Y C L
Sbjct: 448 -RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+RLVFD M +D + WN+M +GY + E + L LF+ ++ PD T +++++A+
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ +LG+E H ++K G + + N L+ MY G+ E+ K F S+DVV W +
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y KA++ + M +EG P+ IT VLSAC+ G ++ G+K +L +R G
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFG 686
Query: 430 LISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILG 474
+ ++ + + ++KA E+ ++P K I W S++ G
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 35/310 (11%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H ++ K +L + G+A + ++ L + VF +M +DL WN + GY +
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSE 535
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
+EAL+L+ + + +PD +TF ++ G + ++ G+E H +++ G E + + N
Sbjct: 536 NEEALNLFLEL-QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
AL+ MY KCG A FD RD + WN++IS Y +GE K L + M ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
+++T V+SA H +++ G ++ L FG E E
Sbjct: 655 NYITFVGVLSACS-----------HAGLVEDGLKQ--------FELMLRFGIEPETEH-- 693
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ M+S + +KA E ++E + P I S+LS CA GN++
Sbjct: 694 ----------YVCMVSLLGRAGRLNKARE---LIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 417 LGIKLHQLAM 426
L ++A+
Sbjct: 741 LAEHAAEMAI 750
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 261 bits (668), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 266/508 (52%), Gaps = 40/508 (7%)
Query: 114 GLYLHSVVSKTMSHLSVRLGN--------------------AFLSMFVKFGDLGHAWYVF 153
GL HS VS T+ L RLGN LS K GD+ +A+ VF
Sbjct: 87 GLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 154 GKMCDRDLFS-WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD 212
KM +RD + WN +I G ++G+ + ++ L++ M +G V+ D + F +L C
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGFATILSMCD-YGS 204
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD--GMPKRDRISWNAMI 270
L GK+VH VI+ G+ VVNALITMY C +V A LVF+ + RD++++N +I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 271 SGY--FENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
G F+ E L++F M E + P +T SV+ + +G +VHG IK G
Sbjct: 265 DGLAGFKRDE---SLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTG 318
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+ V N + MY SF + KVF +E KD+V+W TMIS Y + L A+ Y+
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK 448
M G PDE T S+L+ +LD+ + ++ GL S I I+N LI YSK
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM---LNLKPNSVTLVSI 505
I+KA +F + KN+ISW +II G N FE L F ++ + + P++ TL ++
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 506 LSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDV 564
LS C +LM G + HA+ LR G + + NAL++MY +CG ++ + FN +E+DV
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 565 SAWNILLTGYAERGQGALAEEFFRKMID 592
+WN L++ Y+ G+G A ++ M D
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQD 583
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 258/522 (49%), Gaps = 30/522 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
+G E +++ M +L + D+ ++ +C++ D G +HS+V K ++ +
Sbjct: 168 SGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG-SLDFGKQVHSLVIKAGFFIASSV 226
Query: 133 GNAFLSMFVKFGDLGHAWYVFGK--MCDRDLFSWNVLIGGYAKAGF-FDEALSLYQRMFW 189
NA ++M+ + A VF + + RD ++NV+I G A GF DE+L ++++M
Sbjct: 227 VNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKML- 283
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++P TF V+ +C G +VH I+ GYE V NA +TMY D
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF+ + ++D ++WN MIS Y + + ++ M + V PD T S+++ S
Sbjct: 341 AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL 400
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
D + V +IK G S + + N LI Y G E+ + +F R K+++SW
Sbjct: 401 ---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 370 MISCYEGSVLPDKAVETYQ-MMEAEGS-MPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+IS + + P + +E + ++E+E +PD T++++LS C +L LG + H +R
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G +I N LI+MYS+C I +LEVF+Q+ +K+V+SW S+I + A+
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 488 FRKMMLNLK--PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----L 540
++ M K P++ T ++LSAC+ G + G EI V F G + N L
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI----FNSMVEFHGVIRNVDHFSCL 633
Query: 541 LDMYVRCGRMKPAWNQFNSNERDVSA----WNILLTGYAERG 578
+D+ R G + A + +E+ + + W L + A G
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 217/470 (46%), Gaps = 44/470 (9%)
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L + N + G ++G AL L+ + ++PD Y+ + T + D G +VH
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF------ 274
+ IR G V N L+++Y + G+L + FD + + D SW ++S F
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 275 --------------------------ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
E+G + + LF M ++ V D ++++S
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME--SKDVVS 366
+ G G++VH VIK GF SV N LI MY + + VF + +D V+
Sbjct: 201 DY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
+ +I G D+++ ++ M P ++T SV+ +C+C +G ++H LA+
Sbjct: 260 FNVVIDGLAG-FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAI 315
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+TG Y +++N + MYS + A +VF + +K++++W ++I A+
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 487 FFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYV 545
+++M ++ +KP+ T S+L+ + L + + A ++ G++ + NAL+ Y
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYS 432
Query: 546 RCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
+ G+++ A F S +++ +WN +++G+ G E F +++S+
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Query: 88 ELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLG 147
E+ I D L L+ +C G H+ V + +GNA ++M+ + G +
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 148 HAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTC 207
++ VF +M ++D+ SWN LI Y++ G + A++ Y+ M G V PD TF VL C
Sbjct: 542 NSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 208 GGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR--DRI 264
++ G E+ ++ F G +VD + L+ + + G L A + K R+
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 265 S-WNAMISGYFENGEYMKGLMLF-IMMREVLVDPD-FMTLSSVISAS 308
W A+ S +G+ G M+ ++M + DP ++ LS++ + +
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGA 708
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 258 bits (660), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 236/438 (53%), Gaps = 6/438 (1%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKE 218
D F + VLI D A+ LY R+ + + FP VLR C G + L G +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLV-SETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH +I+ G + D + +L+ MY + G+L A VFDGMP RD ++W+ ++S ENGE
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
+K L +F M + V+PD +T+ SV+ +G ++ R VHG + + F D ++CN
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MY G+ E++F ++ K+ VSWT MIS Y +KA+ ++ M G P+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVF 457
+T+ SVLS+C +G + G +H A+R L +Y ++ L+++Y++C + V
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 458 HQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALM 516
+ D+N+++W S+I +AL FR+M+ +KP++ TL S +SAC G +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 517 CGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYA 575
GK+IH H +R V+ D F+ N+L+DMY + G + A FN R V WN +L G++
Sbjct: 423 LGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 576 ERGQGALAEEFFRKMIDS 593
+ G A F M S
Sbjct: 482 QNGNSVEAISLFDYMYHS 499
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 275/515 (53%), Gaps = 11/515 (2%)
Query: 100 NLVRLCEWKRGY-DEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCD 158
+++R C R + G +H + K + + L M+ + G+L A VF M
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV 164
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
RDL +W+ L+ + G +AL +++ M GV+PD T V+ C + L+ +
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMV-DDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
VH + R ++ D + N+L+TMY KCGDL+ + +F+ + K++ +SW AMIS Y GE
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGE 282
Query: 279 YM-KGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV-SVC 336
+ K L F M + ++P+ +TL SV+S+ L+G + G+ VHG+ ++ + S+
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
L+++Y G + E V + +++V+W ++IS Y + +A+ ++ M +
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
PD T+AS +SAC G + LG ++H +RT +S + N+LIDMYSK +D A V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
F+QI ++V++W S++ G N S EA+ F M + L+ N VT ++++ AC+ IG+L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
GK +H H L I D F AL+DMY +CG + A F + + R + +W+ ++ Y
Sbjct: 522 EKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 575 AERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G+ A F +M++S K N M + C
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 262/514 (50%), Gaps = 8/514 (1%)
Query: 65 SRLNELCL-NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
S L CL NG + +AL+ M + + D ++++V C +H +++
Sbjct: 171 STLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 230
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
M L L N+ L+M+ K GDL + +F K+ ++ SW +I Y + F ++AL
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN-ALITMY 242
+ M G++P++ T VL +CG + ++ GK VH +R + + + ++ AL+ +Y
Sbjct: 291 FSEMI-KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+CG L V + R+ ++WN++IS Y G ++ L LF M + PD TL+
Sbjct: 350 AECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLA 409
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
S ISA E G LG+++HG+VI+ SD+ V N LI MY G+ + VF++++ +
Sbjct: 410 SSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
VV+W +M+ + + +A+ + M +E+T +V+ AC+ +G+L+ G +H
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
+ +GL + LIDMY+KC ++ A VF + ++++SW+S+I ++ R
Sbjct: 529 HKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 483 EALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALL 541
A+ F +M+ + KPN V +++LSAC G++ GK GV+ + +
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFI 647
Query: 542 DMYVRCGRMKPAWNQFNSNE--RDVSAWNILLTG 573
D+ R G +K A+ D S W L+ G
Sbjct: 648 DLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 196/408 (48%), Gaps = 9/408 (2%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS-VVSKTMSHLSVRLGNA 135
E+AL+ M + I + L +++ C EG +H V + + L A
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
+ ++ + G L V + DR++ +WN LI YA G +AL L+++M +KP
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV-TQRIKP 403
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D +T + C + GK++H HVIR +D V N+LI MY K G + A VF
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
+ + R ++WN+M+ G+ +NG ++ + LF M ++ + +T +VI A +G +
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 316 LGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE 375
G+ VH +I G D+ LI MY G+ E VF M S+ +VSW++MI+ Y
Sbjct: 523 KGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
A+ T+ M G+ P+E+ +VLSAC G+++ G L G+
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIP---DKNVISWTSIILGLRLNNR 480
ID+ S+ + +A ++P D +V W S++ G R++ +
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNGCRIHQK 687
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 4/283 (1%)
Query: 315 KLGREVHGYVIKMG-FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+L ++H +++ G D LI+ Y G+ + VF D + +I C
Sbjct: 15 RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC 74
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA-CLGNLDLGIKLHQLAMRTGLIS 432
L D A++ Y + +E + + SVL ACA +L +G K+H ++ G+
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+I +L+ MY + + A +VF +P +++++W++++ N +AL F+ M+
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ ++P++VT++S++ CA +G L + +H R D L N+LL MY +CG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 552 PAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+ F +++ +W +++ Y A F +MI S
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 258 bits (660), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 253/472 (53%), Gaps = 12/472 (2%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
FGD+ A VF + +F WN +I GY++ F +AL +Y M + V PD +TFP
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPH 124
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+L+ C G+ L+ G+ VH V R G++ADV V N LI +Y KC L AR VF+G+P +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 263 R--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R +SW A++S Y +NGE M+ L +F MR++ V PD++ L SV++A + D K GR +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H V+KMG + + L MY G + +F +M+S +++ W MIS Y +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+A++ + M + PD I+I S +SACA +G+L+ +++ R+ + I++ L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNS 499
IDM++KC ++ A VF + D++V+ W+++I+G L+ R+ EA+ +R M + PN
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN- 558
VT + +L AC G + G + ++D+ R G + A+
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 559 -SNERDVSAWNILLTG-----YAERGQGALAEEFFRKMIDSKGNWRKLMGLF 604
+ V+ W LL+ + E G+ A A++ F + G++ +L L+
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYA-AQQLFSIDPSNTGHYVQLSNLY 535
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 4/378 (1%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
K++H ++ G + ++ LI GD+ AR VFD +P+ WNA+I GY N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
+ L+++ M+ V PD T ++ A + ++GR VH V ++GF DV V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 337 NPLIKMYLSFGNREEGEKVFS--RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
N LI +Y VF + + +VSWT ++S Y + P +A+E + M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD + + SVL+A CL +L G +H ++ GL + +L MY+KC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
+F ++ N+I W ++I G N + EA+ F +M+ +++P+++++ S +SACA++G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLT 572
+L + ++ + R D F+ +AL+DM+ +CG ++ A F+ +RDV W+ ++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 573 GYAERGQGALAEEFFRKM 590
GY G+ A +R M
Sbjct: 398 GYGLHGRAREAISLYRAM 415
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 8/446 (1%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N + AL +MQ + D +L++ C G ++H+ V + V +
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 133 GNAFLSMFVKFGDLGHAWYVFG--KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
N ++++ K LG A VF + +R + SW ++ YA+ G EAL ++ +M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
VKPD VL + DLK+G+ +H V++ G E + D++ +L TMY KCG +
Sbjct: 217 -DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
A+++FD M + I WNAMISGY +NG + + +F M V PD ++++S ISA
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
VG + R ++ YV + + DDV + + LI M+ G+ E VF R +DVV W+ M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I Y +A+ Y+ ME G P+++T +L AC G + G +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFR 489
+ID+ + +D+A EV +P V W +++ + +R E +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK-KHRHVELGEYAA 514
Query: 490 KMMLNLKPNSV---TLVSILSACARI 512
+ + ++ P++ +S L A AR+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARL 540
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ NG +A+ M ++ D ++ + + C ++ ++ V +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V + +A + MF K G + A VF + DRD+ W+ +I GY G EA+SL
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
Y+ M GGV P+ TF +L C ++ G + +I +
Sbjct: 412 YRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 244 KCGDLVRARLVFDGMPKRDRIS-WNAMISG-----YFENGEYMKGLMLFIMMREVLVDPD 297
+ G L +A V MP + ++ W A++S + E GEY + I DP
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI-------DPS 523
Query: 298 ----FMTLSSVISASEL 310
++ LS++ +A+ L
Sbjct: 524 NTGHYVQLSNLYAAARL 540
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 280/543 (51%), Gaps = 26/543 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + + NG ++L+Y SM D ++ C G LH +V K
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 124 T----MSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
+ +H+SV GN+ +SM+ K GD A VF ++ RD+ S N ++ G+A G F+E
Sbjct: 318 SGYSPEAHVSV--GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 180 ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA-DVDVVNAL 238
A + +M V ++PD+ T + CG + + G+ VH + +R ++ ++V+N++
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP-- 296
I MY KCG +A L+F RD +SWN+MIS + +NG K LF +EV+ +
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF---KEVVSEYSC 492
Query: 297 ---DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
T+ +++++ + G+ VH ++ K+GF D++ N +I MY+ G R+
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYI--GCRDL-T 549
Query: 354 KVFSRM----ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSA 408
F R+ E++D+ SW ++IS S +++ +Q M EG + D IT+ +SA
Sbjct: 550 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 609
Query: 409 CACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISW 468
LG + G H LA+++ + NTLI MY +CK I+ A++VF I D N+ SW
Sbjct: 610 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 669
Query: 469 TSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRI 528
+I L N E FR L L+PN +T V +LSA ++G+ G + H H +R
Sbjct: 670 NCVISALSQNKAGREVFQLFRN--LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR 727
Query: 529 GVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERGQGALAEEFF 587
G + F+ AL+DMY CG ++ F NS +SAWN +++ + G G A E F
Sbjct: 728 GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELF 787
Query: 588 RKM 590
+++
Sbjct: 788 KEL 790
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 238/469 (50%), Gaps = 11/469 (2%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
L NA ++++ K +L A VF M RD+ SWN ++ G ++L ++ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG-S 283
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGY--EADVDVVNALITMYVKCGDLV 249
G + D TF CV+ C + +L G+ +H VI+ GY EA V V N++I+MY KCGD
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV-LVDPDFMTLSSVISAS 308
A VF+ + RD IS NA+++G+ NG + + + M+ V + PD T+ S+ S
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 309 ELVGDEKLGREVHGYVIKMGF-SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
+ + GR VHGY ++M S + V N +I MY G + E +F +D+VSW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMP--DEITIASVLSACACLGNLDLGIKLHQLA 425
+MIS + + KA ++ + +E S T+ ++L++C +L G +H
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 426 MRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEA 484
+ G ++ AN++I+MY C+ + A + + +++ SW S+I G + E+
Sbjct: 524 QKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLES 583
Query: 485 LIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
L F+ M ++ + +TL+ +SA +G ++ G+ H A++ D L N L+
Sbjct: 584 LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 643
Query: 543 MYVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
MY RC ++ A F ++ ++ +WN +++ ++ G + FR +
Sbjct: 644 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL 692
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 252/534 (47%), Gaps = 13/534 (2%)
Query: 62 NPNSRLNELCLNGSLEQALKYLDSMQELN-ICVDEDALVNLVRLCEWKRGYDEGLYLHS- 119
+ N+ LN NG E+A L+ MQ ++ I D +V++ +C EG +H
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
V M ++ + N+ + M+ K G A +F RDL SWN +I +++ GF +
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 180 ALSLYQRMFW-VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A +L++ + K + T +L +C L GK VH + + G+ ++ N++
Sbjct: 479 AKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSV 538
Query: 239 ITMYVKCGDLVRARLVFDGMPK-RDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDP 296
I MY+ C DL A L + M + RD SWN++ISG +G +++ L F M RE +
Sbjct: 539 INMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 598
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
D +TL ISAS +G GR HG IK D + N LI MY + E KVF
Sbjct: 599 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 658
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
+ ++ SW +IS + + + ++ ++ E P+EIT +LSA LG+
Sbjct: 659 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTS 715
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G++ H +R G + ++ L+DMYS C ++ ++VF ++ +W S+I
Sbjct: 716 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 775
Query: 477 LNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFD 533
+ +A+ F+++ N ++PN + +S+LSAC+ G + G + + GV
Sbjct: 776 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 835
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEE 585
++DM R G+++ A+ + W LL+ G L +E
Sbjct: 836 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKE 889
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 214/415 (51%), Gaps = 10/415 (2%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VLR+ + + + VH ++ G D+ + L+T Y + G+LV + +FD + ++D
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
I WN+MI+ +NG Y+ + LFI M + D TL SA + + +H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
I+ G D S+CN L+ +Y N E VF+ ME +D+VSW T+++ + P K
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI--SYIIIANTL 440
+++ ++ M G D +T + V+SAC+ + L LG LH L +++G +++ + N++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML--NLKPN 498
I MYSKC + A VF ++ ++VIS +I+ G N EA +M ++P+
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF-LPNALLDMYVRCGRMKPAWNQF 557
T+VSI S C + G+ +H + +R+ + + N+++DMY +CG A F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 558 -NSNERDVSAWNILLTGYAERGQGALAEEFFRKMID----SKGNWRKLMGLFRKC 607
+ RD+ +WN +++ +++ G A+ F++++ SK + ++ + C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 226/464 (48%), Gaps = 10/464 (2%)
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L+ + + G+L + +F ++ ++D+ WN +I + G + A+ L+ M G +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EF 186
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
D T + ++ +H I G D + NAL+ +Y K +L A VF
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
M RD +SWN +++ NG K L F M + D +T S VISA + +
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 316 LGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
LG +HG VIK G+S + VSV N +I MY G+ E E VF + +DV+S +++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Query: 374 YEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
+ + + ++A QM + PD T+ S+ S C L G +H +R + S
Sbjct: 367 FAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 433 YII-IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + N++IDMY KC +A +F ++++SW S+I N + +A F+++
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 492 MLNL---KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCG 548
+ K + T+++IL++C +L+ GK +H ++G + N++++MY+ C
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCR 546
Query: 549 RMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
+ A+ + S RD+++WN +++G A G + F+ M
Sbjct: 547 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM 590
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
++ FM L V+ + + + + R VH + +K G D++ + L+ Y G
Sbjct: 83 MESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSS 142
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+F ++ KDV+ W +MI+ + AV + M +G+ D T+ SA + L
Sbjct: 143 CLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLH 202
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
LH LA+ TGL+ + N L+++Y+K + + A VF + ++++SW +I+
Sbjct: 203 LSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT 262
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
N ++L +F+ M + ++VT ++SAC+ I L G+ +H ++ G +
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 533 DGFLP--NALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEEFF 587
+ + N+++ MY +CG + A F RDV + N +L G+A G + EE F
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG---MFEEAF 377
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 285/571 (49%), Gaps = 14/571 (2%)
Query: 48 QVLNTQNT-SSIATKN-PNSRLNELCLNGSLEQALKYLDSMQE-LNICVDEDALVNLVRL 104
Q+L T + S+I T+ N +N LC + +AL+ D Q+ + + ++L+
Sbjct: 17 QILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICA 76
Query: 105 CEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSW 164
C R +G +H + + L N LSM+ K G L A VF M +R+L S+
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY 136
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
+I GY++ G EA+ LY +M V PD + F +++ C D+ GK++H VI
Sbjct: 137 TSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 225 RFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL- 283
+ + + NALI MYV+ + A VF G+P +D ISW+++I+G+ + G + L
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMY 343
L M+ + P+ S + A + G ++HG IK + + L MY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 344 LSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIA 403
G +VF ++E D SW +I+ + D+AV + M + G +PD I++
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 404 SVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCK---CIDKALEVFHQI 460
S+L A L G+++H ++ G ++ + + N+L+ MY+ C C E F
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
D +SW +I+ + + E L F+ M+++ +P+ +T+ ++L C I +L G
Sbjct: 436 ADS--VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++H ++L+ G+A + F+ N L+DMY +CG + A F+S + RDV +W+ L+ GYA+ G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 579 QGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G A F++M + + N +G+ C
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 267/519 (51%), Gaps = 7/519 (1%)
Query: 73 NGSLEQALK-YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
NG +A++ YL +QE ++ D+ A ++++ C G LH+ V K S +
Sbjct: 146 NGQGAEAIRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
NA ++M+V+F + A VF + +DL SW+ +I G+++ GF EALS + M G
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
P+ Y F L+ C + G ++H I+ + +L MY +CG L A
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R VFD + + D SWN +I+G NG + + +F MR PD ++L S++ A
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK-DVVSWTTM 370
G ++H Y+IK GF D++VCN L+ MY + +F + D VSW T+
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTI 444
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
++ P + + +++M PD IT+ ++L C + +L LG ++H +++TGL
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL 504
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
I N LIDMY+KC + +A +F + +++V+SW+++I+G + EALI F++
Sbjct: 505 APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 491 MM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMYVRCG 548
M ++PN VT V +L+AC+ +G + G +++A G++ + ++D+ R G
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 549 RMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEE 585
R+ A + E DV W LL+ +G LA++
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 277/569 (48%), Gaps = 28/569 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ NG ++++ M I D ++++C + G+ +H +V +
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
V +A L M+ K + VF + +++ SW+ +I G + AL
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 184 YQRMFWV-GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMY 242
++ M V GV +Y VLR+C + +L+ G ++H H ++ + AD V A + MY
Sbjct: 269 FKEMQKVNAGVSQSIYA--SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
KC ++ A+++FD +R S+NAMI+GY + K L+LF + + D ++LS
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
V A LV G +++G IK S DV V N I MY E +VF M +
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 363 DVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLH 422
D VSW +I+ +E + + + + M PDE T S+L AC G+L G+++H
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIH 505
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKA----------------LEVFHQIPDKNV- 465
+++G+ S + +LIDMYSKC I++A +E ++ +K +
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQ 565
Query: 466 ---ISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+SW SII G + +S +A + F +MM + + P+ T ++L CA + + GK+I
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 522 HAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQG 580
HA ++ + D ++ + L+DMY +CG + + F + RD WN ++ GYA G+G
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 581 ALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + F +MI + K N + + R C
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRAC 714
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 256/524 (48%), Gaps = 28/524 (5%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
N L ALK+ MQ++N V + +++R C G LH+ K+ +
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
A L M+ K ++ A +F + + S+N +I GY++ +AL L+ R+ G
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSG 377
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D + V R C V L G +++ I+ DV V NA I MY KC L A
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD M +RD +SWNA+I+ + +NG+ + L LF+ M ++PD T S++ A G
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR-------------- 358
G E+H ++K G + + SV LI MY G EE EK+ SR
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 359 --MESKDV----VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
M +K + VSW ++IS Y + A + M G PD+ T A+VL CA L
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ LG ++H ++ L S + I +TL+DMYSKC + + +F + ++ ++W ++I
Sbjct: 617 ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 676
Query: 473 LGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + + EA+ F +M+L N+KPN VT +SIL ACA +G + G E + + ++
Sbjct: 677 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYG 735
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSN--ERDVSAWNILL 571
D LP+ ++D+ + G++K A E D W LL
Sbjct: 736 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 246/483 (50%), Gaps = 28/483 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-- 191
N ++ + K D+ A F M RD+ SWN ++ GY + G E+L + +G
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG---ESLKSIEVFVDMGRE 174
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G++ D TF +L+ C + D G ++H V+R G + DV +AL+ MY K V +
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
VF G+P+++ +SW+A+I+G +N L F M++V +SV+ + +
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ +LG ++H + +K F+ D V + MY N ++ + +F E+ + S+ MI
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
+ Y KA+ + + + G DEI+++ V ACA + L G++++ LA+++ L
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ +AN IDMY KC+ + +A VF ++ ++ +SW +II N + +E L F M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ + ++P+ T SIL AC G+L G EIH+ ++ G+A + + +L+DMY +CG +
Sbjct: 475 LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 551 KPAWNQFNS--NERDVS-------------------AWNILLTGYAERGQGALAEEFFRK 589
+ A + +VS +WN +++GY + Q A+ F +
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 590 MID 592
M++
Sbjct: 594 MME 596
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 35/430 (8%)
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
F V + C L+ GK+ H H+I G+ V+N L+ +Y D V A +VFD M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 259 PKRDRISWNAMI-------------------------------SGYFENGEYMKGLMLFI 287
P RD +SWN MI SGY +NGE +K + +F+
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 288 MMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFG 347
M ++ D T + ++ + D LG ++HG V+++G DV + L+ MY
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 348 NREEGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVL 406
E +VF + K+ VSW+ +I+ C + ++L A++ ++ M+ + + ASVL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS-LALKFFKEMQKVNAGVSQSIYASVL 288
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
+CA L L LG +LH A+++ + I+ +DMY+KC + A +F + N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
S+ ++I G F+AL+ F ++M + L + ++L + ACA + L G +I+ A
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAE 584
++ ++ D + NA +DMY +C + A+ F+ RD +WN ++ + + G+G
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 585 EFFRKMIDSK 594
F M+ S+
Sbjct: 469 FLFVSMLRSR 478
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 228/487 (46%), Gaps = 25/487 (5%)
Query: 43 NAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLV 102
N Q Q+L N+ ++ ++ N+ + +AL + + DE +L +
Sbjct: 331 NMQDAQIL-FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 389
Query: 103 RLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLF 162
R C +G EGL ++ + K+ L V + NA + M+ K L A+ VF +M RD
Sbjct: 390 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
SWN +I + + G E L L+ M ++PD +TF +L+ C G L G E+H
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS----------------- 265
+++ G ++ V +LI MY KCG + A + +R +S
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 266 ---WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
WN++ISGY + MLF M E+ + PD T ++V+ + LG+++H
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
VIK DV +C+ L+ MY G+ + +F + +D V+W MI Y ++
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLI 441
A++ ++ M E P+ +T S+L ACA +G +D G++ + R GL + + ++
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 442 DMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSV 500
D+ K + +ALE+ ++P + + + W +++ ++ + E +L L P
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 501 TLVSILS 507
+ ++LS
Sbjct: 808 SAYTLLS 814
>sp|Q0WNP3|PP319_ARATH Pentatricopeptide repeat-containing protein At4g18520
OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1
Length = 617
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 257/486 (52%), Gaps = 8/486 (1%)
Query: 99 VNLVRLCEWKRGYDEGLYL----HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFG 154
V+ L EW + + G+ L H++ K + GN +S V+ GDL +A VF
Sbjct: 83 VDYALLAEWLQSSN-GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFD 141
Query: 155 KMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLK 214
M +++ +W +I GY K G DEA +L++ G + F C+L C + +
Sbjct: 142 SMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFE 201
Query: 215 RGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYF 274
G++VH ++++ G ++ V ++L+ Y +CG+L A FD M ++D ISW A+IS
Sbjct: 202 LGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 275 ENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
G +K + +FI M P+ T+ S++ A + GR+VH V+K DV
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V L+ MY G + KVF M +++ V+WT++I+ + ++A+ +++M+
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
+ + +T+ S+L AC +G L LG +LH ++ + + I +TL+ +Y KC A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG 513
V Q+P ++V+SWT++I G EAL F ++M+ ++PN T S L ACA
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLT 572
+L+ G+ IH+ A + + F+ +AL+ MY +CG + A+ F+S E+++ +W ++
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 573 GYAERG 578
GYA G
Sbjct: 561 GYARNG 566
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 221/424 (52%), Gaps = 9/424 (2%)
Query: 93 VDEDALVNLVRLCEWKRGYDEGLYLH-SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWY 151
+E V L+ LC + ++ G +H ++V + +L V ++ + + + G+L A
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQCGELTSALR 239
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMF--WVGGVKPDVYTFPCVLRTCGG 209
F M ++D+ SW +I ++ G +A+ ++ M W P+ +T +L+ C
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF---LPNEFTVCSILKACSE 296
Query: 210 VPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAM 269
L+ G++VH V++ + DV V +L+ MY KCG++ R VFDGM R+ ++W ++
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
I+ + G + + LF +M+ + + +T+ S++ A VG LG+E+H +IK
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQM 389
+V + + L+ +Y G + V ++ S+DVVSWT MIS +A++ +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 390 MEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKC 449
M EG P+ T +S L ACA +L +G +H +A + +S + + + LI MY+KC
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSA 508
+ +A VF +P+KN++SW ++I+G N EAL + +R + + +ILS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 509 CARI 512
C I
Sbjct: 597 CGDI 600
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 210/391 (53%), Gaps = 7/391 (1%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
L++ G+ +KR +H ++ + + N LI+ V+ GDLV AR VFD MP+++
Sbjct: 92 LQSSNGMRLIKR---IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNT 148
Query: 264 ISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
++W AMI GY + G + LF ++ + + +++ + +LGR+VHG
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHG 208
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
++K+G + + V + L+ Y G + F ME KDV+SWT +IS K
Sbjct: 209 NMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
A+ + M +P+E T+ S+L AC+ L G ++H L ++ + + + + +L+D
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 443 MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVT 501
MY+KC I +VF + ++N ++WTSII EA+ FR M +L N++T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 502 LVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-N 560
+VSIL AC +GAL+ GKE+HA ++ + + ++ + L+ +Y +CG + A+N
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 561 ERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
RDV +W +++G + G + A +F ++MI
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 420 KLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNN 479
++H +A++ I N LI + + A +VF +P+KN ++WT++I G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 480 RSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
EA F + + N V +L+ C+R G+++H + +++GV + +
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVE 221
Query: 538 NALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++L+ Y +CG + A F+ E+DV +W +++ + +G G A F M++
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 245/438 (55%), Gaps = 4/438 (0%)
Query: 159 RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE 218
++++ WN +I ++K G F EAL Y ++ V PD YTFP V++ C G+ D + G
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
V+ ++ G+E+D+ V NAL+ MY + G L RAR VFD MP RD +SWN++ISGY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
Y + L ++ ++ + PD T+SSV+ A + K G+ +HG+ +K G + V V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPD 398
L+ MYL F + +VF M+ +D VS+ TMI Y + +++V + + + PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPD 306
Query: 399 EITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFH 458
+T++SVL AC L +L L ++ ++ G + + N LID+Y+KC + A +VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 459 QIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMC 517
+ K+ +SW SII G + EA+ F+ MM + + + +T + ++S R+ L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 518 GKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
GK +H++ ++ G+ D + NAL+DMY +CG + + F+S D WN +++
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 577 RGQGALAEEFFRKMIDSK 594
G A + +M S+
Sbjct: 487 FGDFATGLQVTTQMRKSE 504
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 270/531 (50%), Gaps = 8/531 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + NG +AL++ ++E + D+ ++++ C + G ++ +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ +GNA + M+ + G L A VF +M RDL SWN LI GY+ G+++EAL +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 184 YQRM--FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
Y + W + PD +T VL G + +K+G+ +H ++ G + V V N L+ M
Sbjct: 195 YHELKNSW---IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y+K AR VFD M RD +S+N MI GY + + + +F+ + PD +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTV 310
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
SSV+ A + D L + ++ Y++K GF + +V N LI +Y G+ VF+ ME
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
KD VSW ++IS Y S +A++ ++MM D IT ++S L +L G L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNR 480
H +++G+ + ++N LIDMY+KC + +L++F + + ++W ++I +R +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 481 SFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNAL 540
+ + + + P+ T + L CA + A GKEIH LR G + + NAL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 541 LDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++MY +CG ++ + F + RDV W ++ Y G+G A E F M
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 253/490 (51%), Gaps = 18/490 (3%)
Query: 113 EGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
+G LH K+ + V + N ++M++KF A VF +M RD S+N +I GY
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 173 KAGFFDEALSLYQRMFW--VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
K +E++ RMF + KPD+ T VLR CG + DL K ++ ++++ G+
Sbjct: 285 KLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+ V N LI +Y KCGD++ AR VF+ M +D +SWN++ISGY ++G+ M+ + LF MM
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
+ D +T +IS S + D K G+ +H IK G D+SV N LI MY G
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 351 EGEKVFSRMESKDVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
+ K+FS M + D V+W T+IS C T QM ++E +PD T L C
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMC 519
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A L LG ++H +R G S + I N LI+MYSKC C++ + VF ++ ++V++WT
Sbjct: 520 ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWT 579
Query: 470 SIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIG----ALMCGKEIHAH 524
+I + +AL F M + + P+SV ++I+ AC+ G L C +++ H
Sbjct: 580 GMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 525 ALRIGVAFDGFLPNALLDMYVRCGRMKPA--WNQFNSNERDVSAWNILLTGYAERGQGAL 582
+I + + ++D+ R ++ A + Q + D S W +L G
Sbjct: 640 -YKIDPMIEHY--ACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 583 AEEFFRKMID 592
AE R++I+
Sbjct: 697 AERVSRRIIE 706
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 200/393 (50%), Gaps = 2/393 (0%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM-P 259
P + R +L + +H VI G ++ LI Y + + VF + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 260 KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
++ WN++I + +NG + + L + +RE V PD T SVI A + D ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
V+ ++ MGF D+ V N L+ MY G +VF M +D+VSW ++IS Y
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
++A+E Y ++ +PD T++SVL A L + G LH A+++G+ S +++ N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
L+ MY K + A VF ++ ++ +S+ ++I G E++ F + + KP+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDL 307
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T+ S+L AC + L K I+ + L+ G + + N L+D+Y +CG M A + FNS
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 560 NE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
E +D +WN +++GY + G A + F+ M+
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI- 460
I+ LS+ + L L ++H L + GL S + LID YS + +L VF ++
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
P KNV W SII N EAL F+ K+ + + P+ T S++ ACA + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERG 578
++ L +G D F+ NAL+DMY R G + A F+ RD+ +WN L++GY+ G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 579 QGALAEEFFRKMIDSKGNW 597
A E + ++ K +W
Sbjct: 187 YYEEALEIYHEL---KNSW 202
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 256/495 (51%), Gaps = 9/495 (1%)
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
V M H + N +S VK GD+ A +F M DR + +W +L+G YA+ FDEA
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEA 129
Query: 181 LSLYQRMFWVGGVK-PDVYTFPCVLRTCG-GVPDLKRGKEVHVHVIRFGYEAD--VDVVN 236
L+++M PD TF +L C VP G +VH ++ G++ + + V N
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSN 188
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDP 296
L+ Y + L A ++F+ +P++D +++N +I+GY ++G Y + + LF+ MR+ P
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP 248
Query: 297 DFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVF 356
T S V+ A + D LG+++H + GFS D SV N ++ Y E +F
Sbjct: 249 SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF 308
Query: 357 SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLD 416
M D VS+ +IS Y + + ++ ++ M+ G A++LS A L +L
Sbjct: 309 DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 417 LGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
+G +LH A+ S + + N+L+DMY+KC+ ++A +F +P + +SWT++I G
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 477 LNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
L F KM NL+ + T ++L A A +L+ GK++HA +R G + F
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 536 LPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS- 593
+ L+DMY +CG +K A F +R+ +WN L++ +A+ G G A F KMI+S
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 594 -KGNWRKLMGLFRKC 607
+ + ++G+ C
Sbjct: 549 LQPDSVSILGVLTAC 563
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 229/463 (49%), Gaps = 5/463 (1%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+ N L + + L A +F ++ ++D ++N LI GY K G + E++ L+ +M
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ-S 244
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G +P +TF VL+ G+ D G+++H + G+ D V N ++ Y K ++
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
R++FD MP+ D +S+N +IS Y + +Y L F M+ + D ++++S + +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
++GR++H + + V N L+ MY EE E +F + + VSWT +I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S Y L ++ + M D+ T A+VL A A +L LG +LH +R+G +
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + L+DMY+KC I A++VF ++PD+N +SW ++I N A+ F KM
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 492 MLN-LKPNSVTLVSILSACARIGALMCGKE-IHAHALRIGVAFDGFLPNALLDMYVRCGR 549
+ + L+P+SV+++ +L+AC+ G + G E A + G+ +LD+ R GR
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 550 MKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
A + E D W+ +L +LAE K+
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 187/367 (50%), Gaps = 3/367 (0%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH++ T +GN L + K + +F +M + D S+NV+I Y++
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
A ++ +L ++ M +G + + + F +L + L+ G+++H + ++ +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N+L+ MY KC A L+F +P+R +SW A+ISGY + G + GL LF MR
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ D T ++V+ AS LG+++H ++I+ G ++V + L+ MY G+ ++
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M ++ VSW +IS + + + A+ + M G PD ++I VL+AC+ G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 414 NLDLGIKLHQ-LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSI 471
++ G + Q ++ G+ ++D+ + +A ++ ++P + + I W+S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 472 ILGLRLN 478
+ R++
Sbjct: 628 LNACRIH 634
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 39/412 (9%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
+ V +I+ G++ D N ++ ++ G + AR V+D MP ++ +S N MISG+ +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 277 GEYMKGLMLFIMMREVLVD---------------------------------PDFMTLSS 303
G+ LF M + V PD +T ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 304 VISA-SELVGDEKLGREVHGYVIKMGFSDD--VSVCNPLIKMYLSFGNREEGEKVFSRME 360
++ ++ V +G +VH + +K+GF + ++V N L+K Y + +F +
Sbjct: 153 LLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
KD V++ T+I+ YE L +++ + M G P + T + VL A L + LG +
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNR 480
LH L++ TG + N ++D YSK + + +F ++P+ + +S+ +I ++
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 481 SFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA 539
+L FFR+M + + ++LS A + +L G+++H AL + N+
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 540 LLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
L+DMY +C + A F S +R +W L++GY ++G + F KM
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ +GN+ + M+ K A +F + R SW LI GY + G L L+ +M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
++ D TF VL+ L GK++H +IR G +V + L+ MY KCG +
Sbjct: 446 -SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A VF+ MP R+ +SWNA+IS + +NG+ + F M E + PD +++ V++A
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 310 LVGDEKLGREVHGYVIKM-GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRME-SKDVVSW 367
G + G E + + G + ++ + G E EK+ M D + W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 368 TTMISC---YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSA 408
+++++ ++ L ++A E ME ++++++ +A
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 80 LKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSM 139
LK M+ N+ D+ +++ G LH+ + ++ + +V G+ + M
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 140 FVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYT 199
+ K G + A VF +M DR+ SWN LI +A G + A+ + +M G++PD +
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVS 555
Query: 200 FPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
VL C +++G E +G ++ + + G A + D M
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 259 P-KRDRISWNAMISG 272
P + D I W+++++
Sbjct: 616 PFEPDEIMWSSVLNA 630
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 267/534 (50%), Gaps = 6/534 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N LN G+L+ +K M+ I + ++ +C K D G+ LH +V
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + N+ LSM+ K G A +F M D +WN +I GY ++G +E+L+
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD TF +L + +L+ K++H +++R D+ + +ALI Y
Sbjct: 328 FYEMI-SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KC + A+ +F D + + AMISGY NG Y+ L +F + +V + P+ +TL S
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ ++ KLGRE+HG++IK GF + ++ +I MY G ++F R+ +D
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+VSW +MI+ S P A++ ++ M G D ++I++ LSACA L + G +H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ L S + +TLIDMY+KC + A+ VF + +KN++SW SII + + +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 484 ALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDGFLPNAL 540
+L F +M+ ++P+ +T + I+S+C +G + G + + G+ +
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 541 LDMYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+D++ R GR+ A+ S D W LL LAE K++D
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 271/534 (50%), Gaps = 3/534 (0%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ NG L QAL + M + D LV+ C + + +L VS
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + ++ + ++++G + +F ++ +D WNV++ GYAK G D +
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M + + P+ TF CVL C + G ++H V+ G + + + N+L++MY
Sbjct: 227 FSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG A +F M + D ++WN MISGY ++G + L F M V PD +T SS
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
++ + + + +++H Y+++ S D+ + + LI Y + +FS+ S D
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
VV +T MIS Y + L ++E ++ + P+EIT+ S+L L L LG +LH
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
++ G + I +IDMY+KC ++ A E+F ++ ++++SW S+I ++
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 484 ALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A+ FR+M ++ + + V++ + LSACA + + GK IH ++ +A D + + L+D
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
MY +CG +K A N F + E+++ +WN ++ G+ + F +M++ G
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 195/396 (49%), Gaps = 4/396 (1%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMP-KR 261
+L+ C L++GK+VH +I D ++ MY CG +F + +R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 262 DRI-SWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
I WN++IS + NG + L + M V PD T ++ A + + K +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
V +G + V + LIK YL +G + K+F R+ KD V W M++ Y
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
D ++ + +M + P+ +T VLS CA +DLG++LH L + +G+ I N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNS 499
+ MYSKC D A ++F + + ++W +I G + E+L FF +M+ + + P++
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 500 VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS 559
+T S+L + ++ L K+IH + +R ++ D FL +AL+D Y +C + A N F+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 560 -NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
N DV + +++GY G + E FR ++ K
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 239/439 (54%), Gaps = 6/439 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+W+++I YA F ++AL LY +M GV+P YT+P VL+ C G+ + GK +H H
Sbjct: 70 AWDLMIRAYASNDFAEKALDLYYKML-NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
V + D+ V AL+ Y KCG+L A VFD MPKRD ++WNAMISG+ +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 283 LMLFIMMREV-LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIK 341
+ LF+ MR + + P+ T+ + A G + G+ VHGY +MGFS+D+ V ++
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILD 248
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCY-EGSVLPDKAVETYQMMEAEG-SMPDE 399
+Y +VF K+ V+W+ MI Y E ++ + +QM+ + +M
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+ I +L CA G+L G +H A++ G I + + NT+I Y+K + A F +
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCG 518
I K+VIS+ S+I G +N R E+ F +M + ++P+ TL+ +L+AC+ + AL G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
H + + G A + + NAL+DMY +CG++ A F++ ++RD+ +WN +L G+
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 578 GQGALAEEFFRKMIDSKGN 596
G G A F M ++ N
Sbjct: 489 GLGKEALSLFNSMQETGVN 507
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 247/502 (49%), Gaps = 17/502 (3%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C R D+G +HS V+ + + + A + + K G+L A VF +M RD
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
+ +WN +I G++ + + L+ M + G+ P++ T + G L+ GK VH
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYM 280
+ R G+ D+ V ++ +Y K ++ AR VFD K++ ++W+AMI GY EN E +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN-EMI 287
Query: 281 K--GLMLFIMMRE---VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
K G + F M+ +V P + + ++ GD GR VH Y +K GF D++V
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTV 345
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
N +I Y +G+ + + FS + KDV+S+ ++I+ + P+++ + M G
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
PD T+ VL+AC+ L L G H + G I N L+DMY+KC +D A
Sbjct: 406 RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKR 465
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
VF + ++++SW +++ G ++ EAL F M + P+ VTL++ILSAC+ G
Sbjct: 466 VFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGL 525
Query: 515 LMCGKEIHAHALR----IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN--ERDVSAWN 568
+ GK++ R + D + N + D+ R G + A++ N E D+
Sbjct: 526 VDEGKQLFNSMSRGDFNVIPRIDHY--NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 569 ILLTGYAERGQGALAEEFFRKM 590
LL+ L E +KM
Sbjct: 584 TLLSACWTYKNAELGNEVSKKM 605
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 195/419 (46%), Gaps = 10/419 (2%)
Query: 200 FPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGM 258
F +L TC +L G+ +H H+++ + V+ L +Y C ++ AR VFD +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 259 --PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
P+ + I+W+ MI Y N K L L+ M V P T V+ A +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE- 375
G+ +H +V F+ D+ VC L+ Y G E KVF M +D+V+W MIS +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
L D M +G P+ TI + A G L G +H R G + ++
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNL 495
+ ++D+Y+K KCI A VF KN ++W+++I G N EA F +M++N
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 496 KPNSVTLVS---ILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
VT V+ IL CAR G L G+ +H +A++ G D + N ++ Y + G +
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKCQ 608
A+ QF+ +DV ++N L+TG + + F +M S + + L+G+ C
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 33/156 (21%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L ++G ++AL +SMQE + DE L+ ++ C DEG L + +S+
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
GD + C DL A+AG+ DEA
Sbjct: 539 --------------------GDFNVIPRIDHYNCMTDLL---------ARAGYLDEAYDF 569
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
+M + +PD+ +L C + + G EV
Sbjct: 570 VNKMPF----EPDIRVLGTLLSACWTYKNAELGNEV 601
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 263/532 (49%), Gaps = 17/532 (3%)
Query: 71 CLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSV 130
CLN + +K D + + D+ ++ C + D G +H + K S +V
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV 177
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
L L M+ K G++ A VF + R++ W +I GY K +E L L+ RM
Sbjct: 178 VL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RE 235
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
V + YT+ ++ C + L +GK H +++ G E +V +L+ MYVKCGD+
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ D + W AMI GY NG + L LF M+ V + P+ +T++SV+S L
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGL 355
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ + +LGR VHG IK+G D +V N L+ MY + + VF KD+V+W ++
Sbjct: 356 IENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + + +A+ + M +E P+ +T+AS+ SACA LG+L +G LH +++ G
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 431 I--SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFF 488
+ S + + L+D Y+KC A +F I +KN I+W+++I G + +L F
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 489 RKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLD 542
+M+ KPN T SILSAC G + GK+ + + F P+ ++D
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD----YNFTPSTKHYTCMVD 590
Query: 543 MYVRCGRMKPAWNQFNSN--ERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
M R G ++ A + + DV + L G + L E +KM+D
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 252/496 (50%), Gaps = 9/496 (1%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H V++ + + +S++ FG A VF ++ + D + W V++ Y
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
E + LY + G + D F L+ C + DL GK++H +++ +V V+
Sbjct: 124 VEVVKLYD-LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTG 181
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPD 297
L+ MY KCG++ A VF+ + R+ + W +MI+GY +N +GL+LF MRE V +
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
T ++I A + G+ HG ++K G + L+ MY+ G+ +VF+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
D+V WT MI Y + ++A+ +Q M+ P+ +TIASVLS C + NL+L
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 418 GIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRL 477
G +H L+++ G+ +AN L+ MY+KC A VF +K++++W SII G
Sbjct: 362 GRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 478 NNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG--VAFDG 534
N EAL F +M ++ PN VT+ S+ SACA +G+L G +HA+++++G +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI-- 591
+ ALLD Y +CG + A F++ E++ W+ ++ GY ++G + E F +M+
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 592 DSKGNWRKLMGLFRKC 607
K N + C
Sbjct: 541 QQKPNESTFTSILSAC 556
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 228/448 (50%), Gaps = 20/448 (4%)
Query: 68 NELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSH 127
N+LC E+ L + M+E N+ +E L+ C +G + H + K+
Sbjct: 220 NDLC-----EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRM 187
LS L + L M+VK GD+ +A VF + DL W +I GY G +EALSL+Q+M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 188 FWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGD 247
V +KP+ T VL CG + +L+ G+ VH I+ G D +V NAL+ MY KC
Sbjct: 335 KGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQ 392
Query: 248 LVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA 307
A+ VF+ ++D ++WN++ISG+ +NG + L LF M V P+ +T++S+ SA
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 308 SELVGDEKLGREVHGYVIKMGF--SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVV 365
+G +G +H Y +K+GF S V V L+ Y G+ + +F +E K+ +
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 366 SWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLA 425
+W+ MI Y ++E ++ M + P+E T S+LSAC G ++ G K
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 426 MRTGLISYIIIANT-----LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNN 479
+ Y +T ++DM ++ +++AL++ ++P +V + + + G +++
Sbjct: 573 YK----DYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 480 RSFEALIFFRKMMLNLKPNSVTLVSILS 507
R F+ K ML+L P+ + ++S
Sbjct: 629 R-FDLGEIVIKKMLDLHPDDASYYVLVS 655
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 152/316 (48%), Gaps = 12/316 (3%)
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P F+ LS + L R+ HG + G D+S+ L+ +Y FG ++ V
Sbjct: 46 PCFLLLSKCTNIDSL-------RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLV 98
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F ++ D W M+ CY + + V+ Y ++ G D+I + L AC L +L
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
D G K+H ++ +++ L+DMY+KC I A +VF+ I +NV+ WTS+I G
Sbjct: 159 DNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGY 217
Query: 476 RLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG 534
N+ E L+ F +M N+ N T +++ AC ++ AL GK H ++ G+
Sbjct: 218 VKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKM--I 591
L +LLDMYV+CG + A FN + D+ W ++ GY G A F+KM +
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 592 DSKGNWRKLMGLFRKC 607
+ K N + + C
Sbjct: 338 EIKPNCVTIASVLSGC 353
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 264/520 (50%), Gaps = 20/520 (3%)
Query: 77 EQALKYLDSMQELNICVDEDA--LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
++AL +M+ ++ V D L +++ C G LH+ KT SV +G+
Sbjct: 88 DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGS 147
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVK 194
+ L M+ + G + + VF +M R+ +W +I G AG + E L+ + M +
Sbjct: 148 SLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL- 206
Query: 195 PDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLV 254
D YTF L+ C G+ +K GK +H HVI G+ + V N+L TMY +CG++ +
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 255 FDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
F+ M +RD +SW ++I Y G+ +K + FI MR V P+ T +S+ SA +
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
G ++H V+ +G +D +SV N ++KMY + GN +F M +D++SW+T+I Y
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ ++ + + M G+ P + +AS+LS + ++ G ++H LA+ GL
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK-MML 493
+ ++LI+MYSKC I +A +F + +++S T++I G + +S EA+ F K + +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEI-----HAHALRIGVAFDGFLPNALLDMYVRCG 548
+P+SVT +S+L+AC G L G + +R G ++D+ R G
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG----CMVDLLCRAG 562
Query: 549 RMKPAWNQFN--SNERDVSAWNILL-----TGYAERGQGA 581
R+ A N S ++D W LL G ERG+ A
Sbjct: 563 RLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRA 602
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 232/459 (50%), Gaps = 3/459 (0%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG-G 192
N+ L + G+L A VF KM D+ SW +I Y A DEAL L+ M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V PD VL+ CG ++ G+ +H + ++ + V V ++L+ MY + G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VF MP R+ ++W A+I+G G Y +GL F M D T + + A +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
K G+ +H +VI GF + V N L MY G ++G +F M +DVVSWT++I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS 432
Y+ KAVET+ M P+E T AS+ SACA L L G +LH + GL
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 433 YIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM 492
+ ++N+++ MYS C + A +F + +++ISW++II G E +F M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 493 LN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK 551
+ KP L S+LS + + G+++HA AL G+ + + ++L++MY +CG +K
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 552 PAWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRK 589
A F +R D+ + ++ GYAE G+ A + F K
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 188/382 (49%), Gaps = 5/382 (1%)
Query: 217 KEVHVHVIRFGYEADVDV-VNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
K V +++R + V N+ + + G+L AR VFD MP D +SW ++I Y
Sbjct: 24 KPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVT 83
Query: 276 NGEYMKGLMLFIMMREV--LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDV 333
+ L+LF MR V V PD LS V+ A + G +H Y +K V
Sbjct: 84 ANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSV 143
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAE 393
V + L+ MY G ++ +VFS M ++ V+WT +I+ + + + + M
Sbjct: 144 YVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRS 203
Query: 394 GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKA 453
+ D T A L ACA L + G +H + G ++ + +AN+L MY++C +
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 454 LEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARI 512
L +F + +++V+SWTS+I+ + + +A+ F KM + PN T S+ SACA +
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILL 571
L+ G+++H + L +G+ + N+++ MY CG + A F RD+ +W+ ++
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 572 TGYAERGQGALAEEFFRKMIDS 593
GY + G G ++F M S
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQS 405
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 6/277 (2%)
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA--EG 394
N ++ ++ GN +VF +M D+VSWT++I Y + D+A+ + M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
PD ++ VL AC N+ G LH A++T L+S + + ++L+DMY + IDK+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLK-PNSVTLVSILSACARIG 513
VF ++P +N ++WT+II GL R E L +F +M + + ++ T L ACA +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLT 572
+ GK IH H + G + N+L MY CG M+ F N +ERDV +W L+
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 573 GYAERGQGALAEEFFRKMIDSK--GNWRKLMGLFRKC 607
Y GQ A E F KM +S+ N + +F C
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 254/493 (51%), Gaps = 12/493 (2%)
Query: 108 KRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVL 167
+R G +H + +T + ++ N ++ + K G L A +F + +D+ SWN L
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 168 IGGYAKAGFFDEALSLYQ--RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
I GY++ G + ++ Q R + P+ YT + + + G++ H V++
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG---EYMKG 282
D+ V +L+ MY K G + VF MP+R+ +W+ M+SGY G E +K
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 283 LMLFIMMREVLVDPD--FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLI 340
LF+ +E D D F + S ++A+ VG LGR++H IK G V++ N L+
Sbjct: 207 FNLFLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVALSNALV 263
Query: 341 KMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
MY + E K+F ++ ++W+ M++ Y + +AV+ + M + G P E
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY 323
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
TI VL+AC+ + L+ G +LH ++ G ++ L+DMY+K C+ A + F +
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGK 519
+++V WTS+I G N+ + EALI +R+M + PN T+ S+L AC+ + L GK
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAERG 578
++H H ++ G + + +AL MY +CG ++ F + +DV +WN +++G + G
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 579 QGALAEEFFRKMI 591
QG A E F +M+
Sbjct: 504 QGDEALELFEEML 516
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 249/476 (52%), Gaps = 7/476 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G H++V K S + + + + M+ K G + VF M +R+ ++W+ ++ GYA
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 174 AGFFDEALSLYQRMFWVGGVKPDV-YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADV 232
G +EA+ ++ D Y F VL + + G+++H I+ G V
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 233 DVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREV 292
+ NAL+TMY KC L A +FD R+ I+W+AM++GY +NGE ++ + LF M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 293 LVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEG 352
+ P T+ V++A + + G+++H +++K+GF + L+ MY G +
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 353 EKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
K F ++ +DV WT++IS Y + ++A+ Y+ M+ G +P++ T+ASVL AC+ L
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
L+LG ++H ++ G + I + L MYSKC ++ VF + P+K+V+SW ++I
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 473 LGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
GL N + EAL F +M+ ++P+ VT V+I+SAC+ G + G + + + +
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIG 555
Query: 532 FDGFLPN--ALLDMYVRCGRMKPAWNQFNSNERD--VSAWNILLTGYAERGQGALA 583
D + + ++D+ R G++K A S D + W ILL+ G+ L
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 151/300 (50%), Gaps = 9/300 (3%)
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE- 375
GR VHG +I+ G S + N L+ Y G + +F+ + KDVVSW ++I+ Y
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 376 -GSVLPDKAV-ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
G + V + ++ M A+ +P+ T+A + A + L + +G + H L ++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I + +L+ MY K ++ L+VF +P++N +W++++ G R EA+ F +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 494 NLKPNS---VTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRM 550
+ S ++LS+ A + G++IH ++ G+ L NAL+ MY +C +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 551 KPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
A F+S+ +R+ W+ ++TGY++ G+ A + F +M + K + ++G+ C
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
P T+ L+ + NL G +H +RTG + I AN L++ Y+KC + KA +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 457 FHQIPDKNVISWTSIILGLRLN---NRSFEALIFFRKM-MLNLKPNSVTLVSILSACARI 512
F+ I K+V+SW S+I G N + S+ + FR+M ++ PN+ TL I A + +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 513 GALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILL 571
+ G++ HA +++ D ++ +L+ MY + G ++ F ER+ W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 572 TGYAERGQGALAEEFFRKMIDSK 594
+GYA RG+ A + F + K
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREK 214
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
L P++ TL+ L+ ++ L+ G+ +H +R G + N L++ Y +CG++ A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 555 NQFNSNE-RDVSAWNILLTGYAERG---QGALAEEFFRKM--IDSKGNWRKLMGLFR 605
+ FN+ +DV +WN L+TGY++ G + FR+M D N L G+F+
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 266/529 (50%), Gaps = 23/529 (4%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ LC E AL+ M + N+ LV++V C EGL + V
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS-NLPMPEGLMMGKQVHA 226
Query: 124 ---TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
L+ + N ++M+ K G L + + G RDL +WN ++ + EA
Sbjct: 227 YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 181 LSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALI 239
L Y R + GV+PD +T VL C + L+ GKE+H + ++ G + + V +AL+
Sbjct: 287 LE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV 345
Query: 240 TMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL-VDPDF 298
MY C ++ R VFDGM R WNAMI+GY +N + L+LFI M E + +
Sbjct: 346 DMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANS 405
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T++ V+ A G +HG+V+K G D V N L+ MY G + ++F +
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 359 MESKDVVSWTTMISCY------EGSVLPDKAVETYQMMEAEGS-----MPDEITIASVLS 407
ME +D+V+W TMI+ Y E ++L ++ + ++G+ P+ IT+ ++L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
+CA L L G ++H A++ L + + + + L+DMY+KC C+ + +VF QIP KNVI+
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEI-HAHA 525
W II+ ++ EA+ R MM+ +KPN VT +S+ +AC+ G + G I +
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 526 LRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERD---VSAWNILL 571
GV ++D+ R GR+K A+ N RD AW+ LL
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 164/552 (29%), Positives = 283/552 (51%), Gaps = 24/552 (4%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL-SVRLGNA 135
E L Y+D M L I D A L++ + + G +H+ V K + SV + N
Sbjct: 80 EAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 136 FLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
++++ K GD G + VF ++ +R+ SWN LI ++ AL ++ M V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML-DENVEP 197
Query: 196 DVYTFPCVLRTCGGVP---DLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+T V+ C +P L GK+VH + +R G E + ++N L+ MY K G L ++
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 256
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ RD ++WN ++S +N + ++ L M V+PD T+SSV+ A +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 313 DEKLGREVHGYVIKMGFSDDVS-VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
+ G+E+H Y +K G D+ S V + L+ MY + G +VF M + + W MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 372 SCYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
+ Y + +A+ + M E+ G + + T+A V+ AC G +H ++ GL
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
+ NTL+DMYS+ ID A+ +F ++ D+++++W ++I G + +AL+ K
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 491 MM------------LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN 538
M ++LKPNS+TL++IL +CA + AL GKEIHA+A++ +A D + +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 539 ALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI--DSKG 595
AL+DMY +CG ++ + F+ +++V WN+++ Y G G A + R M+ K
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 596 NWRKLMGLFRKC 607
N + +F C
Sbjct: 617 NEVTFISVFAAC 628
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 16/431 (3%)
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
W L+ ++ EA+ Y M V G+KPD Y FP +L+ + D++ GK++H HV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 224 IRFGYEAD-VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+FGY D V V N L+ +Y KCGD VFD + +R+++SWN++IS ++
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 283 LMLFIMMREVLVDPDFMTLSSVISA-SELVGDEKL--GREVHGYVIKMGFSDDVSVCNPL 339
L F M + V+P TL SV++A S L E L G++VH Y ++ G + + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTL 242
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETYQMMEAEGSMP 397
+ MY G + + +D+V+W T++S C +L +A+E + M EG P
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL--EALEYLREMVLEGVEP 300
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTG-LISYIIIANTLIDMYSKCKCIDKALEV 456
DE TI+SVL AC+ L L G +LH A++ G L + + L+DMY CK + V
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM--MLNLKPNSVTLVSILSACARIGA 514
F + D+ + W ++I G N EAL+ F M L NS T+ ++ AC R GA
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTG 573
+ IH ++ G+ D F+ N L+DMY R G++ A F E RD+ WN ++TG
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 574 Y--AERGQGAL 582
Y +E + AL
Sbjct: 481 YVFSEHHEDAL 491
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
+S+ W ++ S L +AV TY M G PD ++L A A L +++LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 420 KLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
++H + G + + +ANTL+++Y KC +VF +I ++N +SW S+I L
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG---ALMCGKEIHAHALRIGVAFDG 534
+ AL FR M+ N++P+S TLVS+++AC+ + LM GK++HA+ LR G +
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236
Query: 535 FLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F+ N L+ MY + G++ + S RD+ WN +L+ + Q A E+ R+M+
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 273/545 (50%), Gaps = 28/545 (5%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNIC---VDEDALVNLVRLCEWKRG-YDEG 114
AT + N ++E S +AL +L +DE L ++ C RG G
Sbjct: 39 ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC---RGDLKRG 95
Query: 115 LYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA 174
+H + + V + NA + M+ K G +A +F + D D+ SWN ++ G
Sbjct: 96 CQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---- 151
Query: 175 GFFDE---ALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEAD 231
FD+ AL+ RM GV D +T+ L C G G ++ V++ G E+D
Sbjct: 152 --FDDNQIALNFVVRM-KSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 232 VDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY-MKGLMLF-IMM 289
+ V N+ ITMY + G AR VFD M +D ISWN+++SG + G + + +++F MM
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 290 REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
RE V+ D ++ +SVI+ D KL R++HG IK G+ + V N L+ Y G
Sbjct: 269 REG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
E + VF +M ++VVSWTTMIS + D AV + M +G P+E+T +++A
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
C + G+K+H L ++TG +S + N+ I +Y+K + ++ A + F I + +ISW
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 470 SIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIG--ALMCGKEIHAHALR 527
++I G N S EAL F PN T S+L+A A ++ G+ HAH L+
Sbjct: 443 AMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 528 IGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEF 586
+G+ + +ALLDMY + G + + FN ++++ W +++ Y+ G
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 587 FRKMI 591
F KMI
Sbjct: 563 FHKMI 567
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 258/481 (53%), Gaps = 14/481 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
AL ++ M+ + D + C G+ GL L S V KT + +GN+F++
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD-EALSLYQRMFWVGGVKPDV 197
M+ + G A VF +M +D+ SWN L+ G ++ G F EA+ +++ M GV+ D
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR-EGVELDH 276
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+F V+ TC DLK +++H I+ GYE+ ++V N L++ Y KCG L + VF
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
M +R+ +SW MIS ++ + +F+ MR V P+ +T +I+A + K G
Sbjct: 337 MSERNVVSWTTMISSNKDDA-----VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGS 377
++HG IK GF + SV N I +Y F E+ +K F + ++++SW MIS + +
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 378 VLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL--GIKLHQLAMRTGLISYII 435
+A++ + AE +MP+E T SVL+A A ++ + G + H ++ GL S +
Sbjct: 452 GFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI-FFRKMML- 493
+++ L+DMY+K ID++ +VF+++ KN WTSII ++ FE ++ F KM+
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS-SHGDFETVMNLFHKMIKE 569
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRI-GVAFDGFLPNALLDMYVRCGRMKP 552
N+ P+ VT +S+L+AC R G + G EI + + + + ++DM R GR+K
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 553 A 553
A
Sbjct: 630 A 630
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 13/403 (3%)
Query: 64 NSRLNELCLNGSL--EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVV 121
NS L+ L G+ E + + D M+E + +D + +++ C + +H +
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 122 SKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEAL 181
K + +GN +S + K G L VF +M +R++ SW +I D+A+
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAV 357
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
S++ M + GV P+ TF ++ +K G ++H I+ G+ ++ V N+ IT+
Sbjct: 358 SIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K L A+ F+ + R+ ISWNAMISG+ +NG + L +F+ + P+ T
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475
Query: 302 SSVISASELVGD--EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRM 359
SV++A D K G+ H +++K+G + V + L+ MY GN +E EKVF+ M
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 360 ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGI 419
K+ WT++IS Y + + + M E PD +T SVL+AC G +D G
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 595
Query: 420 KLHQLAMRT-GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
++ + + L + ++DM + + +A E+ ++P
Sbjct: 596 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 245/465 (52%), Gaps = 5/465 (1%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALSLYQRMF 188
V L + ++++ D A +VF R D++ WN L+ GY+K F + L +++R+
Sbjct: 39 VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL 98
Query: 189 WVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDL 248
PD +TFP V++ G + G+ +H V++ GY DV V ++L+ MY K
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISA- 307
+ VFD MP+RD SWN +IS ++++GE K L LF M +P+ ++L+ ISA
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 308 SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
S L+ E+ G+E+H +K GF D V + L+ MY E +VF +M K +V+W
Sbjct: 219 SRLLWLER-GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW 277
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
+MI Y VE M EG+ P + T+ S+L AC+ NL G +H +R
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ + + I + +LID+Y KC + A VF + SW +I F+A+
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 488 FRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVR 546
+ +M+ + +KP+ VT S+L AC+++ AL GK+IH + D L +ALLDMY +
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG K A+ FNS ++DV +W ++++ Y GQ A F +M
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 234/444 (52%), Gaps = 5/444 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +H++V K+ V + ++ + M+ KF ++ VF +M +RD+ SWN +I + +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G ++AL L+ RM G +P+ + + C + L+RGKE+H ++ G+E D
Sbjct: 186 SGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V +AL+ MY KC L AR VF MP++ ++WN+MI GY G+ + + M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
P TL+S++ A + G+ +HGYVI+ + D+ V LI +Y G E
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
VFS+ + SW MIS Y KAVE Y M + G PD +T SVL AC+ L
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G ++H + L + ++ + L+DMYSKC +A +F+ IP K+V+SWT +I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF 532
+ + EAL F +M LKP+ VTL+++LSAC G + G + + +R
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGI 543
Query: 533 DGFLPN--ALLDMYVRCGRMKPAW 554
+ + + ++D+ R GR+ A+
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAY 567
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 216/394 (54%), Gaps = 5/394 (1%)
Query: 203 VLRTC-GGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKR 261
+LR C L+R K VH ++ G DV + +LI +Y C D AR VF+ R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 262 -DRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISASELVGDEKLGRE 319
D WN+++SGY +N + L +F ++ + PD T +VI A +G E LGR
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 320 VHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVL 379
+H V+K G+ DV V + L+ MY F E +VF M +DV SW T+ISC+ S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 380 PDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT 439
+KA+E + ME+ G P+ +++ +SAC+ L L+ G ++H+ ++ G + +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 440 LIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPN 498
L+DMY KC C++ A EVF ++P K++++W S+I G S + +M++ +P+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
TL SIL AC+R L+ GK IH + +R V D ++ +L+D+Y +CG A F+
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 559 SNERDVS-AWNILLTGYAERGQGALAEEFFRKMI 591
++DV+ +WN++++ Y G A E + +M+
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 204/421 (48%), Gaps = 6/421 (1%)
Query: 46 SVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLC 105
S+QV + +A+ N + ++ +G E+AL+ M+ + +L + C
Sbjct: 161 SLQVFDEMPERDVASWN--TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 106 EWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWN 165
+ G +H K L + +A + M+ K L A VF KM + L +WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
+I GY G + + RM + G +P T +L C +L GK +H +VIR
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
AD+ V +LI +Y KCG+ A VF K SWN MIS Y G + K + +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 286 FIMMREVLVDPDFMTLSSVISA-SELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYL 344
+ M V V PD +T +SV+ A S+L EK G+++H + + D + + L+ MY
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEK-GKQIHLSISESRLETDELLLSALLDMYS 456
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
GN +E ++F+ + KDVVSWT MIS Y P +A+ + M+ G PD +T+ +
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 405 VLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK 463
VLSAC G +D G+K Q+ + G+ I + +ID+ + + +A E+ Q P+
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 464 N 464
+
Sbjct: 577 S 577
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 419 IKL-HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLR 476
IKL HQ + GL +++ +LI++Y CK A VF + +V W S++ G
Sbjct: 23 IKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYS 82
Query: 477 LNNRSFEALIFFRKMMLNLK---PNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFD 533
N+ + L F+++ LN P+S T +++ A +G G+ IH ++ G D
Sbjct: 83 KNSMFHDTLEVFKRL-LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 534 GFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
+ ++L+ MY + + + F+ ERDV++WN +++ + + G+ A E F +M
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 593 S 593
S
Sbjct: 202 S 202
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 267/538 (49%), Gaps = 15/538 (2%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L L + L +A ++L M + + V + L C R G LH +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ + SV L N L M+ + L A +F +M + + S +I YA+ G D+A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M G KP + +L++ L G+++H HVIR G ++ + ++ MYV
Sbjct: 172 FSGML-ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG LV A+ VFD M + ++ ++ GY + G L LF+ + V+ D S
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+ A + + LG+++H V K+G +VSV PL+ Y+ + E + F + +
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLH 422
VSW+ +IS Y ++AV+T++ + ++ S+ + T S+ AC+ L + ++G ++H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 423 QLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSF 482
A++ LI + LI MYSKC C+D A EVF + + ++++WT+ I G +
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 483 EALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR---IGVAFDGFLPN 538
EAL F KM+ +KPNSVT +++L+AC+ G + GK LR + D + +
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY--D 528
Query: 539 ALLDMYVRCGRMKPAWNQFNSN---ERDVSAWNILLTG---YAERGQGALAEEFFRKM 590
++D+Y R G + A +F N E D +W L+G + G +A E R++
Sbjct: 529 CMIDIYARSGLLDEAL-KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQL 585
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 206/433 (47%), Gaps = 10/433 (2%)
Query: 165 NVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVI 224
N+ + +K +EA Q M GV Y++ C+ C + L G+ +H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMD-KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-M 109
Query: 225 RFGYE-ADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
R G E V + N ++ MY +C L A +FD M + + +S MIS Y E G K +
Sbjct: 110 RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 284 MLFIMMREVLVDPDFMTLSSVISASELVGDEKL--GREVHGYVIKMGFSDDVSVCNPLIK 341
LF M P ++++ + LV L GR++H +VI+ G + S+ ++
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKS--LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVN 227
Query: 342 MYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEIT 401
MY+ G ++VF +M K V+ T ++ Y + A++ + + EG D
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 402 IASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIP 461
+ VL ACA L L+LG ++H + GL S + + L+D Y KC + A F +I
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 462 DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP--NSVTLVSILSACARIGALMCGK 519
+ N +SW++II G ++ EA+ F+ + NS T SI AC+ + G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERG 578
++HA A++ + + +AL+ MY +CG + A F S + D+ AW ++G+A G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 579 QGALAEEFFRKMI 591
+ A F KM+
Sbjct: 468 NASEALRLFEKMV 480
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 232/441 (52%), Gaps = 6/441 (1%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKA-G 175
L + ++ + H SV N + V+ GD ++ ++F + + +S+N +I G
Sbjct: 53 LRQIQAQMLLH-SVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWN 111
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+ ALSLY+RM + G+KPD +T+ V C + ++ G+ VH + + G E DV +
Sbjct: 112 DHEAALSLYRRMKF-SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
++LI MY KCG + AR +FD + +RD +SWN+MISGY E G + LF M E +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
PD TL S++ A +GD + GR + I + + LI MY G+ + +V
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F++M KD V+WT MI+ Y + +A + + ME G PD T+++VLSAC +G L
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
+LG ++ A L I +A L+DMY KC +++AL VF +P KN +W ++I
Sbjct: 351 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 410
Query: 476 RLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCG-KEIHAHALRIGVAFDG 534
+ EAL+ F +M ++ P+ +T + +LSAC G + G + H + G+
Sbjct: 411 AHQGHAKEALLLFDRM--SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 468
Query: 535 FLPNALLDMYVRCGRMKPAWN 555
++D+ R G + AW
Sbjct: 469 EHYTNIIDLLSRAGMLDEAWE 489
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 189/362 (52%), Gaps = 5/362 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G +HS + K V + ++ + M+ K G +G+A +F ++ +RD SWN +I GY++
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
AG+ +A+ L+++M G +PD T +L C + DL+ G+ + I
Sbjct: 211 AGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
+ + LI+MY KCGDL AR VF+ M K+DR++W AMI+ Y +NG+ + LF M +
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V PD TLS+V+SA VG +LG+++ + ++ ++ V L+ MY G EE
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+VF M K+ +W MI+ Y +A+ + M P +IT VLSAC G
Sbjct: 390 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAG 446
Query: 414 NLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSII 472
+ G + H+++ GL+ I +ID+ S+ +D+A E + P K + I
Sbjct: 447 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 506
Query: 473 LG 474
LG
Sbjct: 507 LG 508
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 182/417 (43%), Gaps = 50/417 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ G + A+ M+E DE LV+++ C G L +
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
LS LG+ +SM+ K GDL A VF +M +D +W +I Y++ G EA L
Sbjct: 262 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ M GV PD T VL CG V L+ GK++ H + ++ V L+ MY
Sbjct: 322 FFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + A VF+ MP ++ +WNAMI+ Y G + L+LF M V P +T
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIG 437
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA VH ++ G C +M FG + ++E
Sbjct: 438 VLSAC-----------VHAGLVHQG-------CRYFHEMSSMFG-------LVPKIE--- 469
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
+T +I + + D E ++ ME PDEI +A++L AC ++ + K +
Sbjct: 470 --HYTNIIDLLSRAGMLD---EAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 524
Query: 424 LAMR----TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI-----SWTSI 471
+ M +Y+I +N L DM K D++ ++ + D+ V+ SW I
Sbjct: 525 MLMEMKEAKNAGNYVISSNVLADM----KMWDESAKMRALMRDRGVVKTPGCSWIEI 577
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 243/470 (51%), Gaps = 37/470 (7%)
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV--KPDVYTFPCVLRTCGGVPDLKRGK 217
++FSWNV I G++++ E+ LY++M G +PD +T+P + + C + G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
+ HV++ E V NA I M+ CGD+ AR VFD P RD +SWN +I+GY + G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 278 EYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCN 337
E K + ++ +M V PD +T+ ++S+ ++GD G+E + YV + G + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 338 PLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYE---------------------- 375
L+ M+ G+ E ++F +E + +VSWTTMIS Y
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 376 ------GSVLPDK---AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
GSV + A+ +Q M+ + PDEIT+ LSAC+ LG LD+GI +H+
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ L + + +L+DMY+KC I +AL VFH I +N +++T+II GL L+ + A+
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAIS 476
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAH-ALRIGVAFDGFLPNALLDMY 544
+F +M+ + P+ +T + +LSAC G + G++ + R + + ++D+
Sbjct: 477 YFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLL 536
Query: 545 VRCGRMKPAWNQFNS--NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
R G ++ A S E D + W LL G G L E+ +K+++
Sbjct: 537 GRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 189/376 (50%), Gaps = 36/376 (9%)
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVD--PDFMTLSSVISASEL 310
+ G+ + SWN I G+ E+ + +L+ M+R + PD T +
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
+ LG + G+V+K+ V N I M+ S G+ E KVF +D+VSW +
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ Y+ +KA+ Y++ME+EG PD++T+ ++S+C+ LG+L+ G + ++ GL
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILG------LRLNNRSF-- 482
I + N L+DM+SKC I +A +F + + ++SWT++I G L ++ + F
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 483 -----------------------EALIFFRKMML-NLKPNSVTLVSILSACARIGALMCG 518
+AL F++M N KP+ +T++ LSAC+++GAL G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 519 KEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAER 577
IH + + ++ + L +L+DMY +CG + A + F+ R+ + ++ G A
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 578 GQGALAEEFFRKMIDS 593
G + A +F +MID+
Sbjct: 469 GDASTAISYFNEMIDA 484
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 192/411 (46%), Gaps = 34/411 (8%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
L ++C R G + V K L + NA + MF GD+ +A VF + RD
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVH 220
L SWN LI GY K G ++A+ +Y+ M GVKPD T ++ +C + DL RGKE +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 221 VHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGY------- 273
+V G + +VNAL+ M+ KCGD+ AR +FD + KR +SW MISGY
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 274 -----FENGEY-------------------MKGLMLFIMMREVLVDPDFMTLSSVISASE 309
F++ E L LF M+ PD +T+ +SA
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+G +G +H Y+ K S +V++ L+ MY GN E VF +++++ +++T
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTA 460
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRT 428
+I A+ + M G PDEIT +LSAC G + G Q+ R
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRF 520
Query: 429 GLISYIIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLN 478
L + + ++D+ + +++A + +P + + W +++ G R++
Sbjct: 521 NLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMH 571
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G E+A+ M+ + D+ ++ LV C + G + V + +++ L
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD--------------- 178
NA + MF K GD+ A +F + R + SW +I GYA+ G D
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 179 ----------------EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+AL+L+Q M KPD T L C + L G +H +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+ ++ +V + +L+ MY KCG++ A VF G+ R+ +++ A+I G +G+
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
+ F M + + PD +T ++SA G + GR+ Y +M ++ NP +K
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD---YFSQMKSRFNL---NPQLKH 528
Query: 343 Y 343
Y
Sbjct: 529 Y 529
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 235/466 (50%), Gaps = 12/466 (2%)
Query: 117 LHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGF 176
+H+ + K+ V +G A + MFVK + +A VF +M +RD +WN ++ G+ ++G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 177 FDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN 236
D+A SL++ M + + PD T ++++ LK + +H IR G + V V N
Sbjct: 134 TDKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 237 ALITMYVKCGDLVRARLVFDGMPKRDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLV 294
I+ Y KCGDL A+LVF+ + + DR +SWN+M Y GE L+ +M
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 295 DPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEK 354
PD T ++ ++ + GR +H + I +G D+ N I MY +
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 355 VFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGN 414
+F M S+ VSWT MIS Y D+A+ + M G PD +T+ S++S C G+
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 415 LDLGIKLHQLAMRTGLI-SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
L+ G + A G ++I N LIDMYSKC I +A ++F P+K V++WT++I
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 474 GLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKE---IHAHALRIG 529
G LN EAL F KM+ L+ KPN +T +++L ACA G+L G E I I
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTG 573
D + + ++D+ R G+++ A S + D W LL
Sbjct: 493 PGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 225/452 (49%), Gaps = 8/452 (1%)
Query: 163 SWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVH 222
+WN+ I E+L L++ M GG +P+ +TFP V + C + D+ + VH H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 223 VIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKG 282
+I+ + +DV V A + M+VKC + A VF+ MP+RD +WNAM+SG+ ++G K
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 283 LMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKM 342
LF MR + PD +T+ ++I ++ KL +H I++G V+V N I
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 343 YLSFGNREEGEKVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEI 400
Y G+ + + VF ++ D VVSW +M Y A Y +M E PD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 401 TIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQI 460
T ++ ++C L G +H A+ G I NT I MYSK + A +F +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 461 PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGK 519
+ +SWT +I G EAL F M+ + KP+ VTL+S++S C + G+L GK
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 520 EIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAWNQF-NSNERDVSAWNILLTGYAER 577
I A A G D + NAL+DMY +CG + A + F N+ E+ V W ++ GYA
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 578 GQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
G A + F KMI D K N + + + C
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 469
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 230/479 (48%), Gaps = 29/479 (6%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ L+ C +G ++A M+ I D ++ L++ +++ +H+V +
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEAL 181
+ V + N ++S + K GDL A VF + DR + SWN + Y+ G +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 182 SLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITM 241
LY M KPD+ TF + +C L +G+ +H H I G + D++ +N I+M
Sbjct: 242 GLYCLML-REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y K D ARL+FD M R +SW MISGY E G+ + L LF M + PD +TL
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL 360
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRME 360
S+IS G + G+ + G D+V +CN LI MY G+ E +F
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 361 SKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK 420
K VV+WTTMI+ Y + + +A++ + M P+ IT +VL ACA G+L+ G +
Sbjct: 421 EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Query: 421 LHQLAMRT-----GLISYIIIANTLIDMYSKCKCIDKALEVFHQI---PDKNVISWTSII 472
+ + GL Y + ++D+ + +++ALE+ + PD + W +++
Sbjct: 481 YFHIMKQVYNISPGLDHY----SCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALL 534
Query: 473 LGLRLNNRSFEALIFFRKMMLNLKPN----SVTLVSILSAC------ARIGALMCGKEI 521
++ +R+ + + + NL+P V + +I +A ARI ++M + I
Sbjct: 535 NACKI-HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 247/473 (52%), Gaps = 5/473 (1%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
GL++H V K ++ L N LS+++K + +A +F +M R +F+W V+I + K
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+ F ALSL++ M G P+ +TF V+R+C G+ D+ G VH VI+ G+E +
Sbjct: 102 SQEFASALSLFEEMM-ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V ++L +Y KCG A +F + D ISW MIS ++ + L + M +
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V P+ T ++ AS +G E G+ +H +I G +V + L+ Y F E+
Sbjct: 221 VPPNEFTFVKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
+V + +DV WT+++S + ++ +AV T+ M + G P+ T +++LS C+ +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID-KALEVFHQIPDKNVISWTSII 472
+LD G ++H ++ G + N L+DMY KC + +A VF + NV+SWT++I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 473 LGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
LGL + + +M+ ++PN VTL +L AC+++ + EIHA+ LR V
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALA 583
+ + N+L+D Y ++ AWN S RD + L+T + E G+ +A
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 252/517 (48%), Gaps = 7/517 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
AL + M +E ++VR C R G +H V KT + +G++
Sbjct: 107 SALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLS 166
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
++ K G A +F + + D SW ++I A + EAL Y M GV P+
Sbjct: 167 DLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK-AGVPPNE 225
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDG 257
+TF +L L+ GK +H ++I G +V + +L+ Y + + A V +
Sbjct: 226 FTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 258 MPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLG 317
++D W +++SG+ N + + F+ MR + + P+ T S+++S V G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE-EGEKVFSRMESKDVVSWTTMI-SCYE 375
+++H IK+GF D V N L+ MY+ E E +VF M S +VVSWTT+I +
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 376 GSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
+ D +M++ E P+ +T++ VL AC+ L ++ +++H +R + ++
Sbjct: 405 HGFVQDCFGLLMEMVKREVE-PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN- 494
+ N+L+D Y+ + +D A V + ++ I++TS++ + AL M +
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 495 LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAW 554
++ + ++L +SA A +GAL GK +H ++++ G + + N+L+DMY +CG ++ A
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 555 NQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F DV +WN L++G A G + A F +M
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 210/401 (52%), Gaps = 12/401 (2%)
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G +H VI+FG ++D+ N L+++Y+K + AR +FD M R +W MIS + +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ E+ L LF M P+ T SSV+ + + D G VHG VIK GF + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 336 CNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS 395
+ L +Y G +E ++FS +++ D +SWT MIS G+ +A++ Y M G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 396 MPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALE 455
P+E T +L A + LG L+ G +H + G+ +++ +L+D YS+ ++ A+
Sbjct: 222 PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 456 VFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGA 514
V + +++V WTS++ G N R+ EA+ F +M L L+PN+ T +ILS C+ + +
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMK-PAWNQFNSN-ERDVSAWNILLT 572
L GK+IH+ +++G + NAL+DMY++C + A F + +V +W L+
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 573 GYAERG-----QGALAEEFFRKMIDSKGNWRKLMGLFRKCQ 608
G + G G L E R++ + N L G+ R C
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREV---EPNVVTLSGVLRACS 438
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 225/437 (51%), Gaps = 8/437 (1%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+AL++ M + + +E V L+ + G + G +HS + L+V L + +
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSF-LGLEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
+ +F + A V ++D+F W ++ G+ + EA+ + M +G ++P+
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNN 325
Query: 198 YTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC-GDLVRARLVFD 256
+T+ +L C V L GK++H I+ G+E DV NAL+ MY+KC V A VF
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 257 GMPKRDRISWNAMISGYFENGEYMK--GLMLFIMMREVLVDPDFMTLSSVISASELVGDE 314
M + +SW +I G ++G GL++ ++ REV +P+ +TLS V+ A +
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV--EPNVVTLSGVLRACSKLRHV 443
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+ E+H Y+++ ++ V N L+ Y S + V M+ +D +++T++++ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
+ A+ M +G D++++ +SA A LG L+ G LH ++++G
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-ML 493
+ N+L+DMYSKC ++ A +VF +I +V+SW ++ GL N AL F +M M
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 494 NLKPNSVTLVSILSACA 510
+P+SVT + +LSAC+
Sbjct: 624 ETEPDSVTFLILLSACS 640
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 231/521 (44%), Gaps = 39/521 (7%)
Query: 41 SKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVN 100
SK +V+VLN+ + S ++ N ++A+ M+ L + +
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWT--SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVK-FGDLGHAWYVFGKMCDR 159
++ LC R D G +HS K S +GNA + M++K A VFG M
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 160 DLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEV 219
++ SW LI G GF + L M V+P+V T VLR C + ++R E+
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVK-REVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 220 HVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEY 279
H +++R + ++ V N+L+ Y + A V M +RD I++ ++++ + E G++
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKH 509
Query: 280 MKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPL 339
L + M + D ++L ISAS +G + G+ +H Y +K GFS SV N L
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSL 569
Query: 340 IKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDE 399
+ MY G+ E+ +KVF + + DVVSW ++S + A+ ++ M + + PD
Sbjct: 570 VDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDS 629
Query: 400 ITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQ 459
+T +LSAC+ DLG++ Q+ + +++
Sbjct: 630 VTFLILLSACSNGRLTDLGLEYFQVMKK----------------------------IYNI 661
Query: 460 IPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLVSILSACARIGALMCGK 519
P V + ++ L R EA M +LKPN++ ++L AC G L G+
Sbjct: 662 EP--QVEHYVHLVGILGRAGRLEEATGVVETM--HLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 520 EIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSN 560
++ L + + D L L D+Y G KP Q N
Sbjct: 718 DMANKGLALAPS-DPALYILLADLYDESG--KPELAQKTRN 755
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 150/278 (53%), Gaps = 3/278 (1%)
Query: 315 KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
++G +H VIK G +++ +CN L+ +YL K+F M + V +WT MIS +
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYI 434
S A+ ++ M A G+ P+E T +SV+ +CA L ++ G ++H ++TG
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 435 IIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-L 493
++ ++L D+YSKC +A E+F + + + ISWT +I L + EAL F+ +M+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 494 NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ PN T V +L A + +G L GK IH++ + G+ + L +L+D Y + +M+ A
Sbjct: 220 GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 554 WNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
NS+ E+DV W +++G+ + A F +M
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 219/413 (53%), Gaps = 35/413 (8%)
Query: 143 FGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPC 202
F L +A VF + + +L WN + G+A + AL LY M +G + P+ YTFP
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPF 139
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
VL++C K G+++H HV++ G + D+ V +LI+MYV+ G L A VFD P RD
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 263 RIS-------------------------------WNAMISGYFENGEYMKGLMLFIMMRE 291
+S WNAMISGY E G Y + L LF M +
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 292 VLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREE 351
V PD T+ +V+SA G +LGR+VH ++ GF ++ + N LI +Y G E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 352 GEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+F R+ KDV+SW T+I Y L +A+ +Q M G P+++T+ S+L ACA
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 412 LGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
LG +D+G +H + G+ + + +LIDMY+KC I+ A +VF+ I K++ SW
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 470 SIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
++I G ++ R+ + F +M + ++P+ +T V +LSAC+ G L G+ I
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 216/430 (50%), Gaps = 40/430 (9%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGD---LVRARLVFDGMPKRDRISWNAMISGYFE 275
+H +I+ G ++ LI + L A VF + + + + WN M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 276 NGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSV 335
+ + + L L++ M + + P+ T V+ + K G+++HG+V+K+G D+ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 336 CNPLIKMYLSFGNREEGEKVFSR-------------------------------MESKDV 364
LI MY+ G E+ KVF + + KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
VSW MIS Y + +A+E ++ M PDE T+ +V+SACA G+++LG ++H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
G S + I N LID+YSKC ++ A +F ++P K+VISW ++I G N EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 485 LIFFRKMMLNLK-PNSVTLVSILSACARIGALMCGKEIHAHALR--IGVAFDGFLPNALL 541
L+ F++M+ + + PN VT++SIL ACA +GA+ G+ IH + + GV L +L+
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 542 DMYVRCGRMKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM--IDSKGNWR 598
DMY +CG ++ A FNS + +S+WN ++ G+A G+ + + F +M I + +
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 599 KLMGLFRKCQ 608
+GL C
Sbjct: 472 TFVGLLSACS 481
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 179/374 (47%), Gaps = 34/374 (9%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
ALK M L + + +++ C + + EG +H V K L + + + +
Sbjct: 117 SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFS-------------------------------WNV 166
SM+V+ G L A VF K RD+ S WN
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 167 LIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF 226
+I GYA+ G + EAL L++ M V+PD T V+ C ++ G++VH+ +
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 227 GYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF 286
G+ +++ +VNALI +Y KCG+L A +F+ +P +D ISWN +I GY Y + L+LF
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 287 IMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIK--MGFSDDVSVCNPLIKMYL 344
M P+ +T+ S++ A +G +GR +H Y+ K G ++ S+ LI MY
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 345 SFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIAS 404
G+ E +VF+ + K + SW MI + D + + + M G PD+IT
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 405 VLSACACLGNLDLG 418
+LSAC+ G LDLG
Sbjct: 476 LLSACSHSGMLDLG 489
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ ++ G+ ++AL+ M + N+ DE +V +V C + G +H +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++++ NA + ++ K G+L A +F ++ +D+ SWN LIGGY + EAL L
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRF--GYEADVDVVNALITM 241
+Q M G DV T +L C + + G+ +HV++ + G + +LI M
Sbjct: 355 FQEMLRSGETPNDV-TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
Y KCGD+ A VF+ + + SWNAMI G+ +G LF MR++ + PD +T
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 302 SSVISASELVGDEKLGREV 320
++SA G LGR +
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 38/337 (11%)
Query: 295 DPDFMTLSSVISASELVGDEKLG--REVHGYVIKMGFSDDVSVCNPLIKMYL---SFGNR 349
DP + ++ + S S L + L R +H +IK+G + + LI+ + F
Sbjct: 25 DPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL 84
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSAC 409
VF ++ +++ W TM + S P A++ Y M + G +P+ T VL +C
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 410 ACLGNLDLGIKLH----------QLAMRTGLISY---------------------IIIAN 438
A G ++H L + T LIS ++
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 439 TLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKP 497
LI Y+ I+ A ++F +IP K+V+SW ++I G EAL F+ MM N++P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ T+V+++SACA+ G++ G+++H G + + NAL+D+Y +CG ++ A F
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 558 NS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
+DV +WN L+ GY A F++M+ S
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 29/257 (11%)
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
T S Y LP + Y + S+ S+L C L +L + +H ++
Sbjct: 9 TVPSSSYPFHFLPSSSDPPYDSIRNHPSL-------SLLHNCKTLQSLRI---IHAQMIK 58
Query: 428 TGLISYIIIANTLID---MYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
GL + + LI+ + + + A+ VF I + N++ W ++ G L++ A
Sbjct: 59 IGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSA 118
Query: 485 LIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
L + M+ L L PNS T +L +CA+ A G++IH H L++G D ++ +L+ M
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISM 178
Query: 544 YVRCGRMKPAWNQFN-SNERDVSAWNILLTGYAERGQGALAEEFFRK-----------MI 591
YV+ GR++ A F+ S RDV ++ L+ GYA RG A++ F + MI
Sbjct: 179 YVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMI 238
Query: 592 D---SKGNWRKLMGLFR 605
GN+++ + LF+
Sbjct: 239 SGYAETGNYKEALELFK 255
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 250/515 (48%), Gaps = 53/515 (10%)
Query: 128 LSVRLGNAFLSMFVKFGDLGHAWYVFGKM--CDRDLFSWNVLIGGYAKAGFFDEALSLYQ 185
L++ L + +S ++ G L HA + + D ++ WN LI Y G ++ L L+
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 186 RMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKC 245
M + PD YTFP V + CG + ++ G+ H + G+ ++V V NAL+ MY +C
Sbjct: 117 LMHSLSWT-PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC 175
Query: 246 GDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSV 304
L AR VFD M D +SWN++I Y + G+ L +F M E PD +TL +V
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 305 ISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
+ +G LG+++H + + ++ V N L+ MY G +E VFS M KDV
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV 295
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAE------------------------------- 393
VSW M++ Y + AV ++ M+ E
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 394 ----GSMPDEITIASVLSACACLGNLDLGIKLHQLAMR-------TGLISYIIIANTLID 442
G P+E+T+ SVLS CA +G L G ++H A++ G ++ N LID
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 443 MYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMM---LNLKP 497
MY+KCK +D A +F + +++V++WT +I G + + +AL +M +P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGV-AFDGFLPNALLDMYVRCGRMKPAWNQ 556
N+ T+ L ACA + AL GK+IHA+ALR A F+ N L+DMY +CG + A
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 557 F-NSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F N ++ W L+TGY G G A F +M
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 210/447 (46%), Gaps = 53/447 (11%)
Query: 201 PCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
P + C + +K +H ++ FG +++ + LI+ Y+ G L A + P
Sbjct: 32 PPFIHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPP 87
Query: 261 RDR--ISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
D WN++I Y +NG K L LF +M + PD T V A + + G
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
H + GF +V V N L+ MY + + KVF M DVVSW ++I Y
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 379 LPDKAVETYQMMEAE-GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIA 437
P A+E + M E G PD IT+ +VL CA LG LG +LH A+ + +I + +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM------ 491
N L+DMY+KC +D+A VF + K+V+SW +++ G R +A+ F KM
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 492 ----------------------------MLN--LKPNSVTLVSILSACARIGALMCGKEI 521
ML+ +KPN VTL+S+LS CA +GALM GKEI
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 522 HAHALRI-------GVAFDGFLPNALLDMYVRCGRMKPAWNQFNS---NERDVSAWNILL 571
H +A++ G + + N L+DMY +C ++ A F+S ERDV W +++
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 572 TGYAERGQGALAEEFFRKMIDSKGNWR 598
GY++ G A E +M + R
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTR 474
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 249/563 (44%), Gaps = 57/563 (10%)
Query: 44 AQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVR 103
+ +V +L S + NS + NG + L M L+ D + +
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFK 135
Query: 104 LCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFS 163
C G H++ T +V +GNA ++M+ + L A VF +M D+ S
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 164 WNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHV 223
WN +I YAK G AL ++ RM G +PD T VL C + GK++H
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 224 IRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGL 283
+ ++ V N L+ MY KCG + A VF M +D +SWNAM++GY + G + +
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 284 MLFIMMREVLVD-----------------------------------PDFMTLSSVISAS 308
LF M+E + P+ +TL SV+S
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 309 ELVGDEKLGREVHGYVIKM-------GFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
VG G+E+H Y IK G D+ V N LI MY + +F +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 362 K--DVVSWTTMISCYEGSVLPDKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDL 417
K DVV+WT MI Y +KA+E M E + P+ TI+ L ACA L L +
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 418 GIKLHQLAMRTGLISY-IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR 476
G ++H A+R + + ++N LIDMY+KC I A VF + KN ++WTS++ G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 477 LNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGF 535
++ EAL F +M + K + VTL+ +L AC+ G + G E + R+ F G
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVF-GV 611
Query: 536 LPN-----ALLDMYVRCGRMKPA 553
P L+D+ R GR+ A
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAA 634
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 53/468 (11%)
Query: 64 NSRLNELCLNGSLEQALKYLDSM-QELNICVDEDALVNLVRLCEWKRGYDEGLYLH--SV 120
NS + G + AL+ M E D LVN++ C + G LH +V
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 121 VSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEA 180
S+ + ++ V GN + M+ K G + A VF M +D+ SWN ++ GY++ G F++A
Sbjct: 257 TSEMIQNMFV--GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 181 LSLYQRM----------FWVG------------------------GVKPDVYTFPCVLRT 206
+ L+++M W G+KP+ T VL
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 207 CGGVPDLKRGKEVHVHVIRF-------GYEADVDVVNALITMYVKCGDLVRARLVFDGM- 258
C V L GKE+H + I++ G+ + V+N LI MY KC + AR +FD +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 259 PK-RDRISWNAMISGYFENGEYMKGLMLFIMMRE--VLVDPDFMTLSSVISASELVGDEK 315
PK RD ++W MI GY ++G+ K L L M E P+ T+S + A + +
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 316 LGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY 374
+G+++H Y ++ + + V N LI MY G+ + VF M +K+ V+WT++++ Y
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY 554
Query: 375 EGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISY 433
++A+ + M G D +T+ VL AC+ G +D G++ +++ G+
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNR 480
L+D+ + ++ AL + ++P + + W + + R++ +
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 52/356 (14%)
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+ P F+ IS +L+ H ++ G +++ + LI Y+S G
Sbjct: 30 ITPPFIHKCKTISQVKLI---------HQKLLSFGILT-LNLTSHLISTYISVGCLSHAV 79
Query: 354 KVFSRMESKD--VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACAC 411
+ R D V W ++I Y + +K + + +M + PD T V AC
Sbjct: 80 SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139
Query: 412 LGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
+ ++ G H L++ TG IS + + N L+ MYS+C+ + A +VF ++ +V+SW SI
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 472 ILGLRLNNRSFEALIFFRKMM--LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
I + AL F +M +P+++TLV++L CA +G GK++H A+
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 530 VAFDGFLPNALLDMYVRCGRMKPA--------------WN-------------------- 555
+ + F+ N L+DMY +CG M A WN
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 556 --QFNSNERDVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
Q + DV W+ ++GYA+RG G A R+M+ S K N L+ + C
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 378 VLPDKAVETYQMMEAE--GSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYII 435
++P+ A +++Q ++ + EIT + C + + L +HQ + G+++ +
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAPEIT-PPFIHKCKTISQVKL---IHQKLLSFGILT-LN 60
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIP--DKNVISWTSIILGLRLNNRSFEALIFFRKMM- 492
+ + LI Y C+ A+ + + P D V W S+I N + + L F M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 493 LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
L+ P++ T + AC I ++ CG+ HA +L G + F+ NAL+ MY RC +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 553 AWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSKG 595
A F+ + DV +WN ++ YA+ G+ +A E F +M + G
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 271/538 (50%), Gaps = 11/538 (2%)
Query: 75 SLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGN 134
S++ A L+S + +D A ++R C K +H + K S L + N
Sbjct: 29 SVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATN 88
Query: 135 AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG-V 193
L+ +VK G A +F +M +R+ S+ L GYA + + LY R+ G +
Sbjct: 89 ILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHEL 144
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
P V+T L+ + + +H +++ GY+++ V ALI Y CG + AR
Sbjct: 145 NPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF+G+ +D + W ++S Y ENG + L L MR P+ T + + AS +G
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 314 EKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISC 373
+ VHG ++K + D V L+++Y G+ + KVF+ M DVV W+ MI+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 374 YEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISY 433
+ + ++AV+ + M +P+E T++S+L+ CA LG +LH L ++ G
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 434 IIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML 493
I ++N LID+Y+KC+ +D A+++F ++ KN +SW ++I+G +A FR+ +
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 494 N-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKP 552
N + VT S L ACA + ++ G ++H A++ A + N+L+DMY +CG +K
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 553 AWNQFNSNER-DVSAWNILLTGYAERGQGALAEEFFRKMI--DSKGNWRKLMGLFRKC 607
A + FN E DV++WN L++GY+ G G A M D K N +G+ C
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 218/413 (52%), Gaps = 2/413 (0%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
+LHS + K + +G A ++ + G + A VF + +D+ W ++ Y + G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
+F+++L L M + G P+ YTF L+ G+ K VH +++ Y D V
Sbjct: 227 YFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
L+ +Y + GD+ A VF+ MPK D + W+ MI+ + +NG + + LFI MRE V
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P+ TLSS+++ + LG ++HG V+K+GF D+ V N LI +Y + K+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 356 FSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNL 415
F+ + SK+ VSW T+I YE KA ++ E+T +S L ACA L ++
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 416 DLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGL 475
DLG+++H LA++T + ++N+LIDMY+KC I A VF+++ +V SW ++I G
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 476 RLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALR 527
+ +AL M + KPN +T + +LS C+ G + G+E +R
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 202/416 (48%), Gaps = 10/416 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG E +LK L M+ + ++ +D +H + KT L R+
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
G L ++ + GD+ A+ VF +M D+ W+ +I + + GF +EA+ L+ RM
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAF 343
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
V P+ +T +L C G+++H V++ G++ D+ V NALI +Y KC + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL---VDPDFMTLSSVISASE 309
+F + ++ +SWN +I GY GE K F M RE L V +T SS + A
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKA---FSMFREALRNQVSVTEVTFSSALGACA 460
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ LG +VHG IK + V+V N LI MY G+ + + VF+ ME+ DV SW
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNA 520
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG 429
+IS Y L +A+ +M+ P+ +T VLS C+ G +D G + + +R
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 430 LISYIIIANT-LIDMYSKCKCIDKALEVFHQIP-DKNVISWTSII-LGLRLNNRSF 482
I + T ++ + + +DKA+++ IP + +V+ W +++ + NN F
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 1/257 (0%)
Query: 70 LCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLS 129
C NG +A+ M+E + +E L +++ C + G LH +V K L
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
+ + NA + ++ K + A +F ++ ++ SWN +I GY G +A S+++
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V TF L C + + G +VH I+ V V N+LI MY KCGD+
Sbjct: 443 -NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
A+ VF+ M D SWNA+ISGY +G + L + +M++ P+ +T V+S
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 310 LVGDEKLGREVHGYVIK 326
G G+E +I+
Sbjct: 562 NAGLIDQGQECFESMIR 578
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 271/546 (49%), Gaps = 25/546 (4%)
Query: 66 RLNELCLNGSLEQALKYL------DSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
R++ C G L+++ + + D + +AL L++ ++ + G +H
Sbjct: 49 RISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ 108
Query: 120 VVSKTMSHLSVRLGN------AFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
+VS S RL N ++M+ G + +VF + ++LF WN +I Y++
Sbjct: 109 LVSG-----STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+DE L + M + PD +T+PCV++ C G+ D+ G VH V++ G DV
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NAL++ Y G + A +FD MP+R+ +SWN+MI + +NG + +L M E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 294 VD----PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNR 349
D PD TL +V+ + LG+ VHG+ +K+ ++ + N L+ MY G
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 350 EEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGS--MPDEITIASVLS 407
+ +F +K+VVSW TM+ + + + M A G DE+TI + +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 408 ACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
C L +LH +++ + ++AN + Y+KC + A VFH I K V S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I G +N +L +M ++ L P+S T+ S+LSAC+++ +L GKE+H +
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 527 RIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALAEE 585
R + D F+ ++L +Y+ CG + F++ E + + +WN ++TGY + G A
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 586 FFRKMI 591
FR+M+
Sbjct: 584 VFRQMV 589
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 258/520 (49%), Gaps = 15/520 (2%)
Query: 101 LVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRD 160
+++ C GL +H +V KT V +GNA +S + G + A +F M +R+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 161 LFSWNVLIGGYAKAGFFDEALSLYQRMFWV---GGVKPDVYTFPCVLRTCGGVPDLKRGK 217
L SWN +I ++ GF +E+ L M G PDV T VL C ++ GK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
VH ++ + ++ + NAL+ MY KCG + A+++F ++ +SWN M+ G+ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 278 EYMKGLMLFIMMREVL-----VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
+ F ++R++L V D +T+ + + +E+H Y +K F +
Sbjct: 373 DTHG---TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
V N + Y G+ ++VF + SK V SW +I + S P +++ + M+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
G +PD T+ S+LSAC+ L +L LG ++H +R L + + +++ +Y C +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NLKPNSVTLVSILSACAR 511
+F + DK+++SW ++I G N AL FR+M+L ++ ++++ + AC+
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 609
Query: 512 IGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNIL 570
+ +L G+E HA+AL+ + D F+ +L+DMY + G + + FN E+ ++WN +
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 571 LTGYAERGQGALAEEFFRKMIDSKGNWRKL--MGLFRKCQ 608
+ GY G A + F +M + N L +G+ C
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 256/523 (48%), Gaps = 18/523 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELN----ICVDEDALVNLVRLCEWKRGYDEGLYLHS 119
NS + NG E++ L M E N D LV ++ +C +R G +H
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 316
Query: 120 VVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDE 179
K + L NA + M+ K G + +A +F ++++ SWN ++GG++ G
Sbjct: 317 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 180 ALSLYQRMFWVG-GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
+ ++M G VK D T + C L KE+H + ++ + + V NA
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDF 298
+ Y KCG L A+ VF G+ + SWNA+I G+ ++ + L + M+ + PD
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 299 MTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSR 358
T+ S++SA + +LG+EVHG++I+ D+ V ++ +Y+ G + +F
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 359 MESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
ME K +VSW T+I+ Y + PD+A+ ++ M G I++ V AC+ L +L LG
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 419 IKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLN 478
+ H A++ L IA +LIDMY+K I ++ +VF+ + +K+ SW ++I+G ++
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 479 NRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP 537
+ EA+ F +M P+ +T + +L+AC G + G + ++ +F G P
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR---YLDQMKSSF-GLKP 732
Query: 538 N-----ALLDMYVRCGRMKPAWN---QFNSNERDVSAWNILLT 572
N ++DM R G++ A + S E DV W LL+
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein At1g71460,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2
SV=1
Length = 689
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 165/590 (27%), Positives = 289/590 (48%), Gaps = 26/590 (4%)
Query: 12 TPLRQNLRNPKTRIPETSFYFKPKTRHFSSKNAQSVQVLNTQNTSSIATKNP---NSRLN 68
P + +R +TR P TS KPK F ++A ++ + +KNP + +
Sbjct: 34 APAKSPIRPSRTRRPSTSPAKKPKP--FRERDA-------FPSSLPLHSKNPYIIHRDIQ 84
Query: 69 ELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHL 128
+LE AL LD +++ I V+ L+ C ++ G +H +
Sbjct: 85 IFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 129 SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG--FFDEALSLYQR 186
+ L + M+ G + A VF + +++SWN L+ G +G + + LS +
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
M +G V +VY+ V ++ G L++G + H I+ G V + +L+ MY KCG
Sbjct: 205 MRELG-VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPDFMTLSSVI 305
+ AR VFD + +RD + W AMI+G N + L LF M+ E + P+ + L++++
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 306 SASELVGDEKLGREVHGYVIK-MGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDV 364
V KLG+EVH +V+K + + V + LI +Y G+ G +VF + ++
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 365 VSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQL 424
+SWT ++S Y + D+A+ + M+ EG PD +TIA+VL CA L + G ++H
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 425 AMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEA 484
A++ + + + +L+ MYSKC + + +F ++ +NV +WT++I N
Sbjct: 444 ALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAG 503
Query: 485 LIFFRKMMLNL-KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
+ FR M+L+ +P+SVT+ +L+ C+ + AL GKE+H H L+ F+ ++ M
Sbjct: 504 IEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKM 563
Query: 544 YVRCGRMKPAWNQFNSNERDVS-AWNILLTGYAERGQGALAEEFFRKMID 592
Y +CG ++ A F++ S W ++ Y E FR I+
Sbjct: 564 YGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG-------CNELFRDAIN 606
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 244/494 (49%), Gaps = 9/494 (1%)
Query: 27 ETSFYFKPKTRHF-----SSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALK 81
E++ + + K H S K+AQ +V + +S++ + N R + + L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQ--KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 82 YLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFV 141
M+EL + ++ +L N+ + +GL H++ K SV L + + M+
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 142 KFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFP 201
K G +G A VF ++ +RD+ W +I G A EAL L++ M + P+
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 202 CVLRTCGGVPDLKRGKEVHVHVIRF-GYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
+L G V LK GKEVH HV++ Y V + LI +Y KCGD+ R VF G +
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R+ ISW A++SGY NG + + L + M++ PD +T+++V+ + K G+E+
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
H Y +K F +VS+ L+ MY G E ++F R+E ++V +WT MI CY +
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 381 DKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTL 440
+E +++M PD +T+ VL+ C+ L L LG +LH ++ S ++ +
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARI 560
Query: 441 IDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNS 499
I MY KC + A F + K ++WT+II N +A+ F +M+ PN+
Sbjct: 561 IKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNT 620
Query: 500 VTLVSILSACARIG 513
T ++LS C++ G
Sbjct: 621 FTFTAVLSICSQAG 634
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 201/414 (48%), Gaps = 16/414 (3%)
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
G+ + TF +L C L GK+VHVH+ G E++ + L+ MY CG + A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGE--YMKGLMLFIMMREVLVDPDFMTLSSVISASE 309
+ VFD + SWNA++ G +G+ Y L F MRE+ VD + +LS+V +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 310 LVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTT 369
+ G + H IK G + V + L+ MY G +VF + +D+V W
Sbjct: 226 GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGA 285
Query: 370 MISCYEGSVLPDKAVETYQMMEAEGSM-PDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
MI+ + +A+ ++ M +E + P+ + + ++L + L LG ++H +++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
+ + + LID+Y KC + VF+ +N ISWT+++ G N R +AL
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 488 FRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPN-----ALL 541
M +P+ VT+ ++L CA + A+ GKEIH +AL+ + FLPN +L+
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK-----NLFLPNVSLVTSLM 460
Query: 542 DMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMIDSK 594
MY +CG + F+ +R+V AW ++ Y E E FR M+ SK
Sbjct: 461 VMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 161/317 (50%), Gaps = 6/317 (1%)
Query: 114 GLYLHSVVSKTMSHLSVR-LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYA 172
G +H+ V K+ +++ + + + ++ K GD+ VF R+ SW L+ GYA
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 173 KAGFFDEALSLYQRMFWVG--GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEA 230
G FD+AL + + W+ G +PDV T VL C + +K+GKE+H + ++ +
Sbjct: 395 ANGRFDQAL---RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP 451
Query: 231 DVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR 290
+V +V +L+ MY KCG +FD + +R+ +W AMI Y EN + G+ +F +M
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 291 EVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
PD +T+ V++ + KLG+E+HG+++K F V +IKMY G+
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
F + K ++WT +I Y + L A+ ++ M + G P+ T +VLS C+
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 411 CLGNLDLGIKLHQLAMR 427
G +D + L +R
Sbjct: 632 QAGFVDEAYRFFNLMLR 648
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 245/458 (53%), Gaps = 6/458 (1%)
Query: 137 LSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPD 196
++ +++ G L A +FG+M D+ +WNV+I G+ K G A+ + M VK
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKST 326
Query: 197 VYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFD 256
T VL G V +L G VH I+ G +++ V ++L++MY KC + A VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 257 GMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKL 316
+ +++ + WNAMI GY NGE K + LF+ M+ + D T +S++S D ++
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 317 GREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEG 376
G + H +IK + ++ V N L+ MY G E+ ++F RM +D V+W T+I Y
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 377 SVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIII 436
+A + ++ M G + D +AS L AC + L G ++H L+++ GL +
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMML-NL 495
++LIDMYSKC I A +VF +P+ +V+S ++I G NN EA++ F++M+ +
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGV 625
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDG-FLPNALLDMYVRCGRMKPAW 554
P+ +T +I+ AC + +L G + H + G + +G +L +LL MY+ M A
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEAC 685
Query: 555 NQFN--SNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
F+ S+ + + W +++G+++ G A +F+++M
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 240/462 (51%), Gaps = 6/462 (1%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG + ++ M+ +D+ +L+ C + G HS++ K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
++ +GNA + M+ K G L A +F +MCDRD +WN +IG Y + EA L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM + G+ D L+ C V L +GK+VH ++ G + D+ ++LI MY
Sbjct: 517 FKRMN-LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
KCG + AR VF +P+ +S NA+I+GY +N + ++LF M V+P +T ++
Sbjct: 576 KCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCN-PLIKMYLSFGNREEGEKVFSRMES- 361
++ A LG + HG + K GFS + L+ MY++ E +FS + S
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 362 KDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
K +V WT M+S + + ++A++ Y+ M +G +PD+ T +VL C+ L +L G +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSIILGLRLNNR 480
H L + +NTLIDMY+KC + + +VF ++ + NV+SW S+I G N
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 481 SFEALIFFRKM-MLNLKPNSVTLVSILSACARIGALMCGKEI 521
+ +AL F M ++ P+ +T + +L+AC+ G + G++I
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 259/522 (49%), Gaps = 11/522 (2%)
Query: 79 ALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLS 138
A++Y +M++ ++ L +++ D GL +H+ K ++ +G++ +S
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 139 MFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVY 198
M+ K + A VF + +++ WN +I GYA G + + L+ M G D +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDF 429
Query: 199 TFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGM 258
TF +L TC DL+ G + H +I+ ++ V NAL+ MY KCG L AR +F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 259 PKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
RD ++WN +I Y ++ + LF M + D L+S + A V G+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
+VH +K G D+ + LI MY G ++ KVFS + VVS +I+ Y +
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLIS---YII 435
L ++AV +Q M G P EIT A+++ AC +L LG + H + G S Y+
Sbjct: 610 L-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 436 IANTLIDMYSKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLN 494
I +L+ MY + + +A +F ++ K+++ WT ++ G N EAL F+++M +
Sbjct: 669 I--SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 495 -LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPA 553
+ P+ T V++L C+ + +L G+ IH+ + D N L+DMY +CG MK +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 554 WNQFNSNER--DVSAWNILLTGYAERGQGALAEEFFRKMIDS 593
F+ R +V +WN L+ GYA+ G A + F M S
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 242/515 (46%), Gaps = 38/515 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS L+ G + L+ S+ E I ++ ++ C + + G +H + K
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ G A + M+ K + A VF + D + W L GY KAG +EA+ +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
++RM G +PD F V+ T Y+
Sbjct: 249 FERM-RDEGHRPDHLAFVTVINT-----------------------------------YI 272
Query: 244 KCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSS 303
+ G L ARL+F M D ++WN MISG+ + G + F MR+ V TL S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 304 VISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKD 363
V+SA +V + LG VH IK+G + ++ V + L+ MY E KVF +E K+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 364 VVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQ 423
V W MI Y + K +E + M++ G D+ T S+LS CA +L++G + H
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 424 LAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFE 483
+ ++ L + + N L+DMY+KC ++ A ++F ++ D++ ++W +II + E
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 484 ALIFFRKMML-NLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLD 542
A F++M L + + L S L AC + L GK++H +++ G+ D ++L+D
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 543 MYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAE 576
MY +CG +K A F+S E V + N L+ GY++
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 222/462 (48%), Gaps = 39/462 (8%)
Query: 131 RLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWV 190
RLGNA + ++ K + +A F ++D+ +WN ++ Y+ G + L + +F
Sbjct: 96 RLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF-E 153
Query: 191 GGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVR 250
+ P+ +TF VL TC +++ G+++H +I+ G E + AL+ MY KC +
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 251 ARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASEL 310
AR VF+ + + + W + SGY + G + +++F MR+ PD + +VI+
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--- 270
Query: 311 VGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTM 370
Y+ G ++ +F M S DVV+W M
Sbjct: 271 --------------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
IS + A+E + M T+ SVLSA + NLDLG+ +H A++ GL
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRK 490
S I + ++L+ MYSKC+ ++ A +VF + +KN + W ++I G N S + + F
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 491 MMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGR 549
M + + T S+LS CA L G + H+ ++ +A + F+ NAL+DMY +CG
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 550 MKPAWNQFNSN-ERDVSAWNILLTGYAERGQGALAEEFFRKM 590
++ A F +RD WN ++ Y + + A + F++M
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 42/388 (10%)
Query: 213 LKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISG 272
L+ GK VH + G +++ + NA++ +Y KC + A FD + K D +WN+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSM 134
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y G+ K L F+ + E + P+ T S V+S + + GR++H +IKMG +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEA 392
L+ MY + +VF + + V WT + S Y + LP++AV ++ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 393 EGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDK 452
EG PD + +V++ LG L
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKL-----------------------------------KD 279
Query: 453 ALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI---FFRKMMLNLKPNSVTLVSILSAC 509
A +F ++ +V++W +I G R E + FF ++K TL S+LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISG--HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 510 ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWN 568
+ L G +HA A+++G+A + ++ ++L+ MY +C +M+ A F + E++ WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 569 ILLTGYAERGQGALAEEFFRKMIDSKGN 596
++ GYA G+ E F M S N
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYN 425
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 514 ALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSAWNILLTG 573
AL GK +H+ +L +G+ +G L NA++D+Y +C ++ A QF+ E+DV+AWN +L+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSM 134
Query: 574 YAERGQ 579
Y+ G+
Sbjct: 135 YSSIGK 140
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 160/539 (29%), Positives = 265/539 (49%), Gaps = 17/539 (3%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N L+E +G LK M E ++ D+ + ++ G +H + K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
L + + N+ ++M+ K G A VF M +RDL SWN +I G A+ G EA+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPD-LKRGKEVHVHVIRFGYEADVDVVNALITMY 242
+ ++ G+KPD YT VL+ +P+ L K+VHVH I+ +D V ALI Y
Sbjct: 404 FMQLLRC-GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 243 VKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLS 302
+ + A ++F+ D ++WNAM++GY ++ + K L LF +M + D TL+
Sbjct: 463 SRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 303 SVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESK 362
+V + G++VH Y IK G+ D+ V + ++ MY+ G+ + F +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 363 DVVSWTTMIS-CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKL 421
D V+WTTMIS C E ++A + M G +PDE TIA++ A +CL L+ G ++
Sbjct: 582 DDVAWTTMISGCIENGE-EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 422 HQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRS 481
H A++ + + +L+DMY+KC ID A +F +I N+ +W ++++GL +
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 482 FEALIFFRKMM-LNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLP--- 537
E L F++M L +KP+ VT + +LSAC+ G + E + H + + G P
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV---SEAYKHMRSMHGDY-GIKPEIE 756
Query: 538 --NALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGALAEEFFRKMID 592
+ L D R G +K A N S + SA + LL +G + K+++
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 40/466 (8%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG-----FFDEALSLYQR 186
L N +SM+ K G L +A VF KM DRDL SWN ++ YA++ +A L+ R
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-R 134
Query: 187 MFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCG 246
+ V T +L+ C + + H + + G + D V AL+ +Y+K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 247 DLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVIS 306
+ +++F+ MP RD + WN M+ Y E G + + L ++P+ +TL +
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-- 252
Query: 307 ASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVS 366
+ + GD+ +V + +D S + +I F N+ E + S
Sbjct: 253 -ARISGDDSDAGQVKSF----ANGNDASSVSEII-----FRNKGLSEYLHSG-------Q 295
Query: 367 WTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAM 426
++ ++ C+ V D VE D++T +L+ + +L LG ++H +A+
Sbjct: 296 YSALLKCFADMVESD--VEC-----------DQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 427 RTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALI 486
+ GL + ++N+LI+MY K + A VF + ++++ISW S+I G+ N EA+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 487 FFRKMM-LNLKPNSVTLVSILSACARIG-ALMCGKEIHAHALRIGVAFDGFLPNALLDMY 544
F +++ LKP+ T+ S+L A + + L K++H HA++I D F+ AL+D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 545 VRCGRMKPAWNQFNSNERDVSAWNILLTGYAERGQGALAEEFFRKM 590
R MK A F + D+ AWN ++ GY + G + F M
Sbjct: 463 SRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 39/382 (10%)
Query: 204 LRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDR 263
LR DL GK H ++ F + ++N LI+MY KCG L AR VFD MP RD
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 264 ISWNAMISGYFENGE-----YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGR 318
+SWN++++ Y ++ E + +LF ++R+ +V MTLS ++ G
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 319 EVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSV 378
HGY K+G D V L+ +YL FG +EG+ +F M +DVV W M+ Y
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 379 LPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG-IKLHQLAMRTGLISYIIIA 437
++A++ + G P+EIT+ L A + D G +K +S II
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLR--LLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 438 NTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKP 497
N + Y L+ F + + +V +
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDV------------------------------EC 313
Query: 498 NSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF 557
+ VT + +L+ ++ +L G+++H AL++G+ + N+L++MY + + A F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 558 -NSNERDVSAWNILLTGYAERG 578
N +ERD+ +WN ++ G A+ G
Sbjct: 374 DNMSERDLISWNSVIAGIAQNG 395
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 515 LMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTG 573
LM GK HA L + FL N L+ MY +CG + A F+ +RD+ +WN +L
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 574 YAERGQ 579
YA+ +
Sbjct: 115 YAQSSE 120
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 249/465 (53%), Gaps = 10/465 (2%)
Query: 130 VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW 189
V +GN+ ++K GDL F M RD SWNV++ G GF +E L + ++
Sbjct: 82 VSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLR- 140
Query: 190 VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLV 249
V G +P+ T V+ C + G+++H +VIR G+ V N+++ MY D +
Sbjct: 141 VWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSL 197
Query: 250 RARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFI-MMREVLVDPDFMTLSSVISAS 308
AR +FD M +RD ISW+ +I Y ++ E + GL LF M+ E +PD +T++SV+ A
Sbjct: 198 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 257
Query: 309 ELVGDEKLGREVHGYVIKMGFS-DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSW 367
++ D +GR VHG+ I+ GF DV VCN LI MY + + +VF +++VSW
Sbjct: 258 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 317
Query: 368 TTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR 427
++++ + + D+A+E + +M E DE+T+ S+L C +H + +R
Sbjct: 318 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 377
Query: 428 TGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIF 487
G S + ++LID Y+ C +D A V + K+V+S +++I GL RS EA+
Sbjct: 378 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 437
Query: 488 FRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAF-DGFLPNALLDMYVR 546
F M PN++T++S+L+AC+ L K H A+R +A D + +++D Y +
Sbjct: 438 FCHM--RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 495
Query: 547 CGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKM 590
CG ++ A F+ E+++ +W ++++ YA G A F +M
Sbjct: 496 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 540
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 224/439 (51%), Gaps = 8/439 (1%)
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
+G + E +S Y + G D + FP V + C + L +G+ + +++ G+E+ V
Sbjct: 24 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVS 83
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V N++ Y+KCGDL FD M RD +SWN ++ G + G +GL F +R
Sbjct: 84 VGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 143
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
+P+ TL VI A + + G ++HGYVI+ GF SV N ++ MY +
Sbjct: 144 FEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSAR 200
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG-SMPDEITIASVLSACACL 412
K+F M +DV+SW+ +I Y S P ++ ++ M E + PD +T+ SVL AC +
Sbjct: 201 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 260
Query: 413 GNLDLGIKLHQLAMRTGL-ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSI 471
++D+G +H ++R G ++ + + N+LIDMYSK +D A VF + +N++SW SI
Sbjct: 261 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 320
Query: 472 ILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G N R EAL F M+ ++ + VT+VS+L C + K IH +R G
Sbjct: 321 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 380
Query: 531 AFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRK 589
+ ++L+D Y C + A +S +DV + + +++G A G+ A F
Sbjct: 381 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 440
Query: 590 MIDSKGNWRKLMGLFRKCQ 608
M D+ N ++ L C
Sbjct: 441 MRDTP-NAITVISLLNACS 458
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 229/459 (49%), Gaps = 27/459 (5%)
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N+ L M+ L A +F +M +RD+ SW+V+I Y ++ L L++ M
Sbjct: 185 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 243
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE-ADVDVVNALITMYVKCGDLVRAR 252
+PD T VL+ C + D+ G+ VH IR G++ ADV V N+LI MY K D+ A
Sbjct: 244 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 303
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFD R+ +SWN++++G+ N Y + L +F +M + V+ D +T+ S++ +
Sbjct: 304 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 363
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+ +HG +I+ G+ + + LI Y S ++ V M KDVVS +TMIS
Sbjct: 364 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 423
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL-I 431
+ D+A+ + M P+ IT+ S+L+AC+ +L H +A+R L I
Sbjct: 424 GLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 480
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ I + +++D Y+KC I+ A F QI +KN+ISWT II +N +AL F +M
Sbjct: 481 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 540
Query: 492 -MLNLKPNSVTLVSILSACARIGALMCG--------KEIHAHALRIGVAFDGFLPNALLD 542
PN+VT ++ LSAC G + G +E H +L+ + ++D
Sbjct: 541 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ--------HYSCIVD 592
Query: 543 MYVRCGRMKPAWNQFNSNERDV----SAWNILLTGYAER 577
M R G + A + DV SAW +L+G R
Sbjct: 593 MLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR 631
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 243/468 (51%), Gaps = 17/468 (3%)
Query: 121 VSKTMSHLS-------VRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
V + +HL+ V + + L++++K G + A +F +M +RD WN LI GY++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
G+ +A L+ M G P T +L CG + +G+ VH + G E D
Sbjct: 129 NGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 234 VVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVL 293
V NALI+ Y KC +L A ++F M + +SWN MI Y ++G + + +F M E
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 294 VDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
V+ +T+ +++SA V E L H V+K G +D+SV L+ Y G E
Sbjct: 248 VEISPVTIINLLSAH--VSHEPL----HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 354 KVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++++ + +V T+++SCY D AV + D + + +L C
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 414 NLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIIL 473
++D+G+ LH A+++GL + ++ N LI MYSK ++ L +F Q+ + +ISW S+I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 474 GLRLNNRSFEALIFFRKMMLN--LKPNSVTLVSILSACARIGALMCGKEIHAHALRIGVA 531
G + R+ A F +MML L P+++T+ S+L+ C+++ L GKE+H + LR
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 532 FDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA-WNILLTGYAERG 578
+ F+ AL+DMY +CG A + F S + +A WN +++GY+ G
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 218/449 (48%), Gaps = 9/449 (2%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG A K M + LVNL+ C +G +H V +K+ L ++
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
NA +S + K +LG A +F +M D+ SWN +IG Y+++G +EA+++++ MF
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF---- 244
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ +V P + + + +H V++ G D+ VV +L+ Y +CG LV A
Sbjct: 245 -EKNVEISPVTIINL--LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
++ + + +++S Y E G+ ++ F R++ + D + L ++ +
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
+G +HGY IK G V N LI MY F + E +F +++ ++SW ++IS
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 373 CYEGSVLPDKAVETY-QMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
S A E + QMM G +PD ITIAS+L+ C+ L L+LG +LH +R
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+ + LIDMY+KC +A VF I +W S+I G L+ AL + +M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGK 519
LKP+ +T + +LSAC G + GK
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGK 570
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 8/381 (2%)
Query: 217 KEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFEN 276
++V H+ + G + V V +L+ +Y+K G + A+++FD MP+RD + WNA+I GY N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 277 GEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVC 336
G LFI+M + P TL +++ G GR VHG K G D V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 337 NPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSM 396
N LI Y E +F M+ K VSW TMI Y S L ++A+ ++ M +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 397 PDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEV 456
+TI ++LSA LH L ++ G+++ I + +L+ YS+C C+ A +
Sbjct: 250 ISPVTIINLLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 457 FHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM-MLNLKPNSVTLVSILSACARIGAL 515
+ +++ TSI+ A+++F K L +K ++V LV IL C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAWNILLTGY 574
G +H +A++ G+ + N L+ MY + ++ F E + +WN +++G
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 575 AERGQGALAEEFFRKMIDSKG 595
+ G+ + A E F +M+ + G
Sbjct: 424 VQSGRASTAFEVFHQMMLTGG 444
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 8/361 (2%)
Query: 59 ATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLH 118
+T + N+ + +G E+A+ +M E N+ + ++NL+ + LH
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL------SAHVSHEPLH 269
Query: 119 SVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFD 178
+V K + + + + + + G L A ++ + ++ YA+ G D
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 179 EALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNAL 238
A+ + + + +K D +L C + G +H + I+ G VVN L
Sbjct: 330 IAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 239 ITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLF-IMMREVLVDPD 297
ITMY K D+ +F+ + + ISWN++ISG ++G +F MM + PD
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 298 FMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFS 357
+T++S+++ + LG+E+HGY ++ F ++ VC LI MY GN + E VF
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 358 RMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDL 417
+++ +W +MIS Y S L +A+ Y M +G PDEIT VLSAC G +D
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 418 G 418
G
Sbjct: 569 G 569
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++ A+ Y ++L + +D ALV ++ C+ D G+ LH K+ +
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
N ++M+ KF D+ ++F ++ + L SWN +I G ++G A ++ +M GG+
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
PD T +L C + L GKE+H + +R +E + V ALI MY KCG+ V+A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 254 VFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGD 313
VF + +WN+MISGY +G + L ++ MRE + PD +T V+SA
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN---- 561
Query: 314 EKLGREVHGYVIKMGFSDDVSVC 336
HG GF D+ +C
Sbjct: 562 -------HG-----GFVDEGKIC 572
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 258/491 (52%), Gaps = 49/491 (9%)
Query: 144 GDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCV 203
G + +A+ +F K+ + D+ WN +I G++K E + LY M GV PD +TFP +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML-KEGVTPDSHTFPFL 140
Query: 204 L---RTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
L + GG L GK++H HV++FG +++ V NAL+ MY CG + AR VFD K
Sbjct: 141 LNGLKRDGGA--LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
D SWN MISGY EY + + L + M LV P +TL V+SA V D+ L + V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSV 378
H YV + + + N L+ Y + G + ++F M+++DV+SWT+++ Y G++
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 379 ---------LP--------------------DKAVETYQMMEAEGSMPDEITIASVLSAC 409
+P ++++E ++ M++ G +PDE T+ SVL+AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 410 ACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWT 469
A LG+L++G + + + + +++ N LIDMY KC C +KA +VFH + ++ +WT
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 470 SIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSACARIGALMCGKEIHA----- 523
++++GL N + EA+ +FF+ ++++P+ +T + +LSAC G + ++ A
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 524 HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNERDVSA--WNILLTGYAERGQGA 581
H + + G ++DM R G +K A+ + ++ W LL
Sbjct: 499 HRIEPSLVHYG----CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEP 554
Query: 582 LAEEFFRKMID 592
+AE +K+++
Sbjct: 555 MAELAAKKILE 565
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 203/436 (46%), Gaps = 41/436 (9%)
Query: 114 GLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAK 173
G LH V K ++ + NA + M+ G + A VF + C D+FSWN++I GY +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 174 AGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
++E++ L M V P T VL C V D K VH +V E +
Sbjct: 214 MKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 234 VVNALITMYVKCGDL---VR----------------------------ARLVFDGMPKRD 262
+ NAL+ Y CG++ VR AR FD MP RD
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
RISW MI GY G + + L +F M+ + PD T+ SV++A +G ++G +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
Y+ K +DV V N LI MY G E+ +KVF M+ +D +WT M+ + +
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTG--LISYIIIANTL 440
A++ + M+ PD+IT VLSAC G +D K MR+ + ++ +
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFA-KMRSDHRIEPSLVHYGCM 511
Query: 441 IDMYSKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNS 499
+DM + + +A E+ ++P + N I W +++ RL+N A + +K +L L+P++
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK-ILELEPDN 570
Query: 500 ----VTLVSILSACAR 511
L +I + C R
Sbjct: 571 GAVYALLCNIYAGCKR 586
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 210/455 (46%), Gaps = 42/455 (9%)
Query: 177 FDEALSLYQRMFW---VGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVD 233
F+ LS+++ + + D F +L C K ++H I G +
Sbjct: 11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPT 67
Query: 234 VVNALITMYVK--CGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMRE 291
L + G + A +F +P+ D + WN MI G+ + +G+ L++ M +
Sbjct: 68 FQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLK 127
Query: 292 VLVDPDFMTLSSVISASELVGDE-KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNRE 350
V PD T +++ + G G+++H +V+K G ++ V N L+KMY G +
Sbjct: 128 EGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMD 187
Query: 351 EGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACA 410
VF R +DV SW MIS Y ++++E ME P +T+ VLSAC+
Sbjct: 188 MARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
Query: 411 CLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTS 470
+ + DL ++H+ + + N L++ Y+ C +D A+ +F + ++VISWTS
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 471 IILG------LRLNNRSF-------------------------EALIFFRKMM-LNLKPN 498
I+ G L+L F E+L FR+M + P+
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 499 SVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFN 558
T+VS+L+ACA +G+L G+ I + + + D + NAL+DMY +CG + A F+
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 559 S-NERDVSAWNILLTGYAERGQGALAEEFFRKMID 592
++RD W ++ G A GQG A + F +M D
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 32/267 (11%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNA- 135
E++++ L M+ + L+ ++ C + D +H VS+ + S+RL NA
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 136 ----------------FLSM--------------FVKFGDLGHAWYVFGKMCDRDLFSWN 165
F SM +V+ G+L A F +M RD SW
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 166 VLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIR 225
++I GY +AG F+E+L +++ M G+ PD +T VL C + L+ G+ + ++ +
Sbjct: 338 IMIDGYLRAGCFNESLEIFREM-QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK 396
Query: 226 FGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLML 285
+ DV V NALI MY KCG +A+ VF M +RD+ +W AM+ G NG+ + + +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKV 456
Query: 286 FIMMREVLVDPDFMTLSSVISASELVG 312
F M+++ + PD +T V+SA G
Sbjct: 457 FFQMQDMSIQPDDITYLGVLSACNHSG 483
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G ++L+ MQ + DE +V+++ C + G ++ + + K V +G
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
NA + M+ K G A VF M RD F+W ++ G A G EA+ ++ +M + +
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM-SI 465
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVN--ALITMYVKCGDLVRA 251
+PD T+ VL C + + ++ +R + + +V+ ++ M + G + A
Sbjct: 466 QPDDITYLGVLSACNHSGMVDQARKFFAK-MRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 252 RLVFDGMP-KRDRISWNAMI-SGYFENGEYMKGL 283
+ MP + I W A++ + N E M L
Sbjct: 525 YEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 253/508 (49%), Gaps = 70/508 (13%)
Query: 116 YLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
Y+H+ V K+ + + N + + K G L VF KM R++++WN ++ G K G
Sbjct: 41 YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 176 FFDEALSLYQRM------FWVG------------------------GVKPDVYTFPCVLR 205
F DEA SL++ M W G + Y+F VL
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 206 TCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRIS 265
C G+ D+ +G +VH + + + +DV + +AL+ MY KCG++ A+ VFD M R+ +S
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 266 WNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVI 325
WN++I+ + +NG ++ L +F MM E V+PD +TL+SVISA + K+G+EVHG V+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 326 KMG-FSDDVSVCNPLIKMYLSFGNREEGEKVF---------------------------- 356
K +D+ + N + MY +E +F
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 357 ---SRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLG 413
++M ++VVSW +I+ Y + ++A+ + +++ E P + A++L ACA L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 414 NLDLGIKLHQLAMRTGLI------SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVIS 467
L LG++ H ++ G I + N+LIDMY KC C+++ VF ++ +++ +S
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 468 WTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHAL 526
W ++I+G N EAL FR+M+ + KP+ +T++ +LSAC G + G+ +
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 527 R-IGVAFDGFLPNALLDMYVRCGRMKPA 553
R GVA ++D+ R G ++ A
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 238/484 (49%), Gaps = 42/484 (8%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS ++ + E+AL Y M + ++E + +++ C ++G+ +HS+++K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+ V +G+A + M+ K G++ A VF +M DR++ SWN LI + + G EAL +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFG-YEADVDVVNALITMY 242
+Q M V+PD T V+ C + +K G+EVH V++ D+ + NA + MY
Sbjct: 241 FQMML-ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 243 VKCGDLVRARLVFDGMP-------------------------------KRDRISWNAMIS 271
KC + AR +FD MP +R+ +SWNA+I+
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 272 GYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF-- 329
GY +NGE + L LF +++ V P + ++++ A + + LG + H +V+K GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 330 ----SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVE 385
DD+ V N LI MY+ G EEG VF +M +D VSW MI + + ++A+E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 386 TYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT-GLISYIIIANTLIDMY 444
++ M G PD IT+ VLSAC G ++ G R G+ ++D+
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 445 SKCKCIDKALEVFHQIP-DKNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLV 503
+ +++A + ++P + + W S++ ++ +R+ + + +L ++P++
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV-HRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 504 SILS 507
+LS
Sbjct: 599 VLLS 602
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 170/309 (55%), Gaps = 34/309 (11%)
Query: 318 REVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS----- 372
R VH VIK GFS+++ + N LI Y G+ E+G +VF +M +++ +W ++++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 373 ------------------CYEGSVLP--------DKAVETYQMMEAEGSMPDEITIASVL 406
C S++ ++A+ + MM EG + +E + ASVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 407 SACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVI 466
SAC+ L +++ G+++H L ++ +S + I + L+DMYSKC ++ A VF ++ D+NV+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 467 SWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHA 525
SW S+I N + EAL F+ M+ + ++P+ VTL S++SACA + A+ G+E+H
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 526 LRIG-VAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE-RDVSAWNILLTGYAERGQGALA 583
++ + D L NA +DMY +C R+K A F+S R+V A +++GYA A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 584 EEFFRKMID 592
F KM +
Sbjct: 340 RLMFTKMAE 348
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 33/207 (15%)
Query: 421 LHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLR---- 476
+H +++G + I I N LID YSKC ++ +VF ++P +N+ +W S++ GL
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 477 ---------------------------LNNRSFEALIFFRKMMLN-LKPNSVTLVSILSA 508
++R EAL +F M N + S+LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNS-NERDVSAW 567
C+ + + G ++H+ + D ++ +AL+DMY +CG + A F+ +R+V +W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 568 NILLTGYAERGQGALAEEFFRKMIDSK 594
N L+T + + G A + F+ M++S+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESR 248
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 488 FRKMMLNLKP--NSVTLVSILSAC--ARIGALMCGKEIHAHALRIGVAFDGFLPNALLDM 543
F K+ +L +S +L +C +++ A+ + +HA ++ G + + F+ N L+D
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 544 YVRCGRMKPAWNQFNS-NERDVSAWNILLTGYAERGQGALAEEFFRKMID-SKGNWRKLM 601
Y +CG ++ F+ +R++ WN ++TG + G A+ FR M + + W ++
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 602 GLFRK 606
F +
Sbjct: 125 SGFAQ 129
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 256/527 (48%), Gaps = 43/527 (8%)
Query: 123 KTMSHL-------SVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAG 175
K SHL + L N + + K G + A +F +M +RD SWN +I A+ G
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 176 FFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVV 235
DE +++RM GV+ +F VL++CG + DL+ +++H V+++GY +VD+
Sbjct: 142 VSDEVFRMFRRMN-RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLE 200
Query: 236 NALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVD 295
+++ +Y KC + AR VFD + +SWN ++ Y E G + +++F M E+ V
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 296 PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKV 355
P T+SSV+ A ++G+ +H +K+ D V + MY+ E +V
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 356 FSRMESKDVVSWTTMISCYEGSVLP-------------------------------DKAV 384
F + SKD+ SWT+ +S Y S L D+A+
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEAL 380
Query: 385 ETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMY 444
+ +M E D +T+ +L+ C+ + ++ +G + H R G + +I+AN L+DMY
Sbjct: 381 DFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMY 440
Query: 445 SKCKCIDKALEVFHQIPD-KNVISWTSIILGLRLNNRSFEALIFFRKMMLNLKPNSVTLV 503
KC + A F Q+ + ++ +SW +++ G+ RS +AL FF M + KP+ TL
Sbjct: 441 GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLA 500
Query: 504 SILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNER 562
++L+ CA I AL GK IH +R G D + A++DMY +C A F + R
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 563 DVSAWNILLTGYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
D+ WN ++ G G+ E F + + K + +G+ + C
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 235/490 (47%), Gaps = 39/490 (7%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
N+ + NG ++ + M + E + +++ C LH V K
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSL 183
+V L + + ++ K + A VF ++ + SWNV++ Y + GF DEA+ +
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 184 YQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYV 243
+ +M + V+P +T V+ C L+ GK +H ++ AD V ++ MYV
Sbjct: 251 FFKMLELN-VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 244 KCGDLVRARLVFDG-------------------------------MPKRDRISWNAMISG 272
KC L AR VFD MP+R+ +SWNAM+ G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 273 YFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDD 332
Y E+ + L +MR+ + + D +TL +++ + D ++G++ HG++ + G+ +
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 333 VSVCNPLIKMYLSFGNREEGEKVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMME 391
V V N L+ MY G + F +M E +D VSW +++ ++A+ ++ M+
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ 489
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCID 451
E P + T+A++L+ CA + L+LG +H +R G ++I ++DMYSKC+C D
Sbjct: 490 VEAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 452 KALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN---LKPNSVTLVSILSA 508
A+EVF + +++I W SII G N RS E F M+L +KP+ VT + IL A
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF--MLLENEGVKPDHVTFLGILQA 606
Query: 509 CARIGALMCG 518
C R G + G
Sbjct: 607 CIREGHVELG 616
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 214/440 (48%), Gaps = 35/440 (7%)
Query: 203 VLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRD 262
+ R+C + + ++V H++ F + ++N I Y KCG + AR +F+ MP+RD
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 263 RISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHG 322
SWNA+I+ +NG + +F M V + + V+ + L+ D +L R++H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 323 YVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDK 382
V+K G+S +V + ++ +Y + +VF + + VSW ++ Y D+
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDE 246
Query: 383 AVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID 442
AV + M P T++SV+ AC+ L++G +H +A++ +++ +++ ++ D
Sbjct: 247 AVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFD 306
Query: 443 MYSKCKCIDKALEVFHQ-------------------------------IPDKNVISWTSI 471
MY KC ++ A VF Q +P++N++SW ++
Sbjct: 307 MYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAM 366
Query: 472 ILGLRLNNRSFEALIFFRKMMLNLKP-NSVTLVSILSACARIGALMCGKEIHAHALRIGV 530
+ G + EAL F M ++ ++VTLV IL+ C+ I + GK+ H R G
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 531 AFDGFLPNALLDMYVRCGRMKPA--WNQFNSNERDVSAWNILLTGYAERGQGALAEEFFR 588
+ + NALLDMY +CG ++ A W + S RD +WN LLTG A G+ A FF
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Query: 589 KM-IDSKGNWRKLMGLFRKC 607
M +++K + L L C
Sbjct: 487 GMQVEAKPSKYTLATLLAGC 506
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 163/315 (51%), Gaps = 10/315 (3%)
Query: 152 VFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFW-VGGVKPDVYTFPCVLRTCGGV 210
+F M +R++ SWN ++GGY A +DEAL M + + D T +L C G+
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI--DNVTLVWILNVCSGI 408
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK-RDRISWNAM 269
D++ GK+ H + R GY+ +V V NAL+ MY KCG L A + F M + RD +SWNA+
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 270 ISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGF 329
++G G + L F M +V P TL+++++ + LG+ +HG++I+ G+
Sbjct: 469 LTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 330 SDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS--CYEGSVLPDKAVETY 387
DV + ++ MY + +VF ++D++ W ++I C G + E +
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGR--SKEVFELF 585
Query: 388 QMMEAEGSMPDEITIASVLSACACLGNLDLGIK-LHQLAMRTGLISYIIIANTLIDMYSK 446
++E EG PD +T +L AC G+++LG + ++ + + + + +I++Y K
Sbjct: 586 MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 447 CKCIDKALEVFHQIP 461
C+ + E +P
Sbjct: 646 YGCLHQLEEFLLLMP 660
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 4/273 (1%)
Query: 77 EQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAF 136
++AL +L M++ +D LV ++ +C G H + + +V + NA
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 137 LSMFVKFGDLGHAWYVFGKMCD-RDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKP 195
L M+ K G L A F +M + RD SWN L+ G A+ G ++ALS ++ M KP
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM--QVEAKP 494
Query: 196 DVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVF 255
YT +L C +P L GK +H +IR GY+ DV + A++ MY KC A VF
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 256 DGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEK 315
RD I WN++I G NG + LF+++ V PD +T ++ A G +
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVE 614
Query: 316 LGREVHGYV-IKMGFSDDVSVCNPLIKMYLSFG 347
LG + + K S V + +I++Y +G
Sbjct: 615 LGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 164/563 (29%), Positives = 277/563 (49%), Gaps = 17/563 (3%)
Query: 37 RHFSSKNAQSVQVLNTQNTSSIATKNPNSRLNELCLNGSLEQALKYLDSMQELNICVDED 96
RHFS + L +SS TK SR+ ELC G L +A++ L+S I
Sbjct: 8 RHFSQ---HASLCLTPSISSSAPTKQ--SRILELCKLGQLTEAIRILNSTHSSEIPATPK 62
Query: 97 ALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFG-DLGHAWYVFGK 155
+L++ C + G+ H+ V K+ +GN+ LS++ K G + VF
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 156 MCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKR 215
+D SW ++ GY +AL ++ M G+ + +T ++ C + +++
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGEVRL 181
Query: 216 GKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFE 275
G+ H VI G+E + + + L +Y + V AR VFD MP+ D I W A++S + +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 276 NGEYMKGLMLFIMM-REVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVS 334
N Y + L LF M R + PD T +V++A + K G+E+HG +I G +V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 335 VCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEG 394
V + L+ MY G+ E +VF+ M K+ VSW+ ++ Y + +KA+E ++ ME +
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK- 360
Query: 395 SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKAL 454
D +VL ACA L + LG ++H +R G +I+ + LID+Y K CID A
Sbjct: 361 ---DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 455 EVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNLKPNSVTLVSILSACARIG 513
V+ ++ +N+I+W +++ L N R EA+ FF M+ +KP+ ++ ++IL+AC G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 514 ALMCGKEIHA-HALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQFNSNE--RDVSAWNIL 570
+ G+ A G+ + ++D+ R G + A N E D S W +L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 571 LTGYAERGQGA-LAEEFFRKMID 592
L A + +AE ++M++
Sbjct: 538 LGPCAANADASRVAERIAKRMME 560
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 192/375 (51%), Gaps = 18/375 (4%)
Query: 149 AWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCG 208
A VF +M + D+ W ++ ++K ++EAL L+ M G+ PD TF VL CG
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 209 GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNA 268
+ LK+GKE+H +I G ++V V ++L+ MY KCG + AR VF+GM K++ +SW+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 269 MISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMG 328
++ GY +NGE+ K + +F M E D +V+ A + +LG+E+HG ++ G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 329 FSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQ 388
+V V + LI +Y G + +V+S+M +++++W M+S + ++AV +
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 389 MMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANT-----LIDM 443
M +G PD I+ ++L+AC G +D G L + SY I T +ID+
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK----SYGIKPGTEHYSCMIDL 508
Query: 444 YSKCKCIDKALEVFHQIPDKNVISWTSIILG-LRLNNRSFEALIFFRKMMLNLKP----N 498
+ ++A + + +N S ++LG N + K M+ L+P +
Sbjct: 509 LGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMS 568
Query: 499 SVTLVSILSACARIG 513
V L ++ A R G
Sbjct: 569 YVLLSNMYKAIGRHG 583
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 241/485 (49%), Gaps = 46/485 (9%)
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
LG + + D+ A VF ++ +R++ NV+I Y GF+ E + ++ M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 192 GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRA 251
V+PD YTFPCVL+ C + G+++H + G + + V N L++MY KCG L A
Sbjct: 136 -VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 252 RLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELV 311
RLV D M +RD +SWN+++ GY +N + L + M V + D T++S++ A
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Query: 312 GDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMI 371
E + MY+ + +F +M K +VSW MI
Sbjct: 255 TTENV-------------------------MYV--------KDMFFKMGKKSLVSWNVMI 281
Query: 372 SCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLI 431
Y + +P +AVE Y MEA+G PD ++I SVL AC L LG K+H R LI
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 432 SYIIIANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKM 491
+++ N LIDMY+KC C++KA +VF + ++V+SWT++I + R +A+ F K+
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 492 M-LNLKPNSVTLVSILSACARIGALMCGK---EIHAHALRIGVAFDGFLPNALLDMYVRC 547
L P+S+ V+ L+AC+ G L G+ ++ +I + ++D+ R
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMVDLLGRA 459
Query: 548 GRMKPAWN--QFNSNERDVSAWNILLTG---YAERGQGAL-AEEFFRKMIDSKGNWRKLM 601
G++K A+ Q S E + W LL +++ G L A++ F+ + G + L
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 602 GLFRK 606
++ K
Sbjct: 520 NIYAK 524
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 39/387 (10%)
Query: 211 PDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMI 270
PD++ + VH +I + + L+ Y D+ AR VFD +P+R+ I N MI
Sbjct: 53 PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 271 SGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS 330
Y NG Y +G+ +F M V PD T V+ A G +GR++HG K+G S
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 331 DDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMM 390
+ V N L+ MY G E V M +DVVSW +++ Y + D A+E + M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 391 EAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLID--MYSKCK 448
E+ D T+AS+L A ++NT + MY K
Sbjct: 233 ESVKISHDAGTMASLLPA---------------------------VSNTTTENVMYVK-- 263
Query: 449 CIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILS 507
++F ++ K+++SW +I N EA+ + +M + +P++V++ S+L
Sbjct: 264 ------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 508 ACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWNQF-NSNERDVSA 566
AC AL GK+IH + R + + L NAL+DMY +CG ++ A + F N RDV +
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 567 WNILLTGYAERGQGALAEEFFRKMIDS 593
W +++ Y G+G A F K+ DS
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDS 404
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 159/346 (45%), Gaps = 34/346 (9%)
Query: 73 NGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRL 132
NG + +K +M N+ D +++ C G +H +K ++ +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 133 GNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGG 192
GN +SM+ K G L A V +M RD+ SWN L+ GYA+ FD+AL + + M V
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV-K 236
Query: 193 VKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRAR 252
+ D T +L P + +V MYVK D+
Sbjct: 237 ISHDAGTMASLL------PAVSNTTTENV-------------------MYVK--DM---- 265
Query: 253 LVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
F M K+ +SWN MI Y +N ++ + L+ M +PD ++++SV+ A
Sbjct: 266 --FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMIS 372
LG+++HGY+ + ++ + N LI MY G E+ VF M+S+DVVSWT MIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 373 CYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLG 418
Y S AV + ++ G +PD I + L+AC+ G L+ G
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 78 QALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFL 137
+A++ M+ D ++ +++ C G +H + + ++ L NA +
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 138 SMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDV 197
M+ K G L A VF M RD+ SW +I Y +G +A++L+ ++ G+ PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDS 410
Query: 198 YTFPCVLRTCGGVPDLKRGK 217
F L C L+ G+
Sbjct: 411 IAFVTTLAACSHAGLLEEGR 430
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 249/483 (51%), Gaps = 14/483 (2%)
Query: 118 HSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFF 177
H K S + + N L ++KFG LG+A +F +M RD SWN +I GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 178 DEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNA 237
++A L+ M G D Y+F +L+ V G++VH VI+ GYE +V V ++
Sbjct: 83 EDAWCLFTCMK-RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 238 LITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMR-EVLVDP 296
L+ MY KC + A F + + + +SWNA+I+G+ + + L +M + V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 297 DFMTLSSVISASELVGDE---KLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGE 353
D T + +++ L+ D L ++VH V+K+G ++++CN +I Y G+ + +
Sbjct: 202 DAGTFAPLLT---LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 354 KVFSRM-ESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACL 412
+VF + SKD++SW +MI+ + L + A E + M+ D T +LSAC+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 413 GNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSK--CKCIDKALEVFHQIPDKNVISWTS 470
+ G LH + ++ GL N LI MY + ++ AL +F + K++ISW S
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 471 IILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGALMCGKEIHAHALRIG 529
II G S +A+ FF + + +K + ++L +C+ + L G++IHA A + G
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 530 VAFDGFLPNALLDMYVRCGRMKPAWNQFN--SNERDVSAWNILLTGYAERGQGALAEEFF 587
+ F+ ++L+ MY +CG ++ A F S++ AWN ++ GYA+ G G ++ + F
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 588 RKM 590
+M
Sbjct: 499 SQM 501
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 231/453 (50%), Gaps = 5/453 (1%)
Query: 74 GSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLG 133
G LE A M+ VD + L++ + +D G +H +V K +V +G
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 134 NAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGV 193
++ + M+ K + A+ F ++ + + SWN LI G+ + A L M V
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 194 KPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARL 253
D TF +L K+VH V++ G + ++ + NA+I+ Y CG + A+
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 254 VFDGMP-KRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVG 312
VFDG+ +D ISWN+MI+G+ ++ LFI M+ V+ D T + ++SA
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 313 DEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSF--GNREEGEKVFSRMESKDVVSWTTM 370
+ G+ +HG VIK G S N LI MY+ F G E+ +F ++SKD++SW ++
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 371 ISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL 430
I+ + L + AV+ + + + D+ +++L +C+ L L LG ++H LA ++G
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 431 ISYIIIANTLIDMYSKCKCIDKALEVFHQIPDKN-VISWTSIILGLRLNNRSFEALIFFR 489
+S + ++LI MYSKC I+ A + F QI K+ ++W ++ILG + +L F
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499
Query: 490 KMM-LNLKPNSVTLVSILSACARIGALMCGKEI 521
+M N+K + VT +IL+AC+ G + G E+
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 8/397 (2%)
Query: 219 VHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGE 278
H + I+ G +D+ V N ++ Y+K G L A ++FD MPKRD +SWN MISGY G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 279 YMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNP 338
LF M+ D D + S ++ V LG +VHG VIK G+ +V V +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 339 LIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLPDKAVETYQMMEAEGSMP- 397
L+ MY E+ + F + + VSW +I+ + A +ME + ++
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 398 DEITIASVLSACACLGNLDLGIKLHQLAMRTGLISYIIIANTLIDMYSKCKCIDKALEVF 457
D T A +L+ +L ++H ++ GL I I N +I Y+ C + A VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 458 HQI-PDKNVISWTSIILGLRLNNRSFEALIFFRKMMLN-LKPNSVTLVSILSACARIGAL 515
+ K++ISW S+I G + A F +M + ++ + T +LSAC+
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 516 MCGKEIHAHALRIGVAFDGFLPNALLDMYVR--CGRMKPAWNQFNS-NERDVSAWNILLT 572
+ GK +H ++ G+ NAL+ MY++ G M+ A + F S +D+ +WN ++T
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 573 GYAERGQGALAEEFFRKMIDS--KGNWRKLMGLFRKC 607
G+A++G A +FF + S K + L R C
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 64 NSRLNELCLNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSK 123
NS + G E A+K+ ++ I VD+ A L+R C G +H++ +K
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 124 TMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMCDR-DLFSWNVLIGGYAKAGFFDEALS 182
+ + + ++ + M+ K G + A F ++ + +WN +I GYA+ G +L
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 183 LYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGKE-VHVHVIRFGYEADVDVVNALITM 241
L+ +M VK D TF +L C ++ G E +++ + + ++ A + +
Sbjct: 497 LFSQMC-NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDL 555
Query: 242 YVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTL 301
+ G + +A+ + + MP ++PD M L
Sbjct: 556 LGRAGLVNKAKELIESMP----------------------------------LNPDPMVL 581
Query: 302 SSVISASELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMES 361
+ + G+ ++ +V +++++ D + + L MY EE V M+
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVS-LSHMYSDLKKWEEKASVKKMMKE 640
Query: 362 KDV 364
+ V
Sbjct: 641 RGV 643
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 222/397 (55%), Gaps = 10/397 (2%)
Query: 203 VLRTCG--GVPDLKRGKEVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPK 260
+LR C G+ D +G +VH ++++ G ++ N LI MY KC + + A VFD MP+
Sbjct: 12 ILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 261 RDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISASELVGDEKLGREV 320
R+ +SW+A++SG+ NG+ L LF M + P+ T S+ + A L+ + G ++
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 321 HGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCYEGSVLP 380
HG+ +K+GF V V N L+ MY G E EKVF R+ + ++SW MI+ + +
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 381 DKAVETYQMMEAEG--SMPDEITIASVLSACACLGNLDLGIKLHQLAMRTGL--ISYIII 436
KA++T+ MM+ PDE T+ S+L AC+ G + G ++H +R+G S I
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 437 ANTLIDMYSKCKCIDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEALIFFRKMM-LNL 495
+L+D+Y KC + A + F QI +K +ISW+S+ILG EA+ F+++ LN
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 496 KPNSVTLVSILSACARIGALMCGKEIHAHALRIGVAFDGFLPNALLDMYVRCGRMKPAWN 555
+ +S L SI+ A L GK++ A A+++ + + N+++DMY++CG + A
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 556 QFNSNE-RDVSAWNILLTGYAERGQGALAEEFFRKMI 591
F + +DV +W +++TGY + G G + F +M+
Sbjct: 370 CFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 277/515 (53%), Gaps = 27/515 (5%)
Query: 98 LVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVRLGNAFLSMFVKFGDLGHAWYVFGKMC 157
LV+++R+C K D+G +H + K+ S L++ N + M+ K + A+ VF M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 158 DRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVGGVKPDVYTFPCVLRTCGGVPDLKRGK 217
+R++ SW+ L+ G+ G +LSL+ M G+ P+ +TF L+ CG + L++G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 218 EVHVHVIRFGYEADVDVVNALITMYVKCGDLVRARLVFDGMPKRDRISWNAMISGYFENG 277
++H ++ G+E V+V N+L+ MY KCG + A VF + R ISWNAMI+G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 278 EYMKGLMLFIMMREVLVD--PDFMTLSSVISASELVGDEKLGREVHGYVIKMGFS--DDV 333
K L F MM+E + PD TL+S++ A G G+++HG++++ GF
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 334 SVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWTTMISCY--EGSVLPDKAVETYQMME 391
++ L+ +Y+ G K F +++ K ++SW+++I Y EG + +A+ ++ ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV--EAMGLFKRLQ 305
Query: 392 AEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMR--TGLISYIIIANTLIDMYSKCKC 449
S D ++S++ A L G ++ LA++ +GL + ++ N+++DMY KC
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGL 363
Query: 450 IDKALEVFHQIPDKNVISWTSIILGLRLNNRSFEAL-IFFRKMMLNLKPNSVTLVSILSA 508
+D+A + F ++ K+VISWT +I G + +++ IF+ + N++P+ V +++LSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 509 CARIGALMCGKEIHAHALRIGVAFDGFLPNA-----LLDMYVRCGRMKPAWNQFNSN--E 561
C+ G + G+E+ + L G P ++D+ R GR+K A + ++ +
Sbjct: 424 CSHSGMIKEGEELFSKLLET----HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 562 RDVSAWNILLTGYAERGQGALAEEFFRKM--IDSK 594
+V W LL+ G L +E + + ID+K
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 5/406 (1%)
Query: 72 LNGSLEQALKYLDSMQELNICVDEDALVNLVRLCEWKRGYDEGLYLHSVVSKTMSHLSVR 131
LNG L+ +L M I +E ++ C ++GL +H K + V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 132 LGNAFLSMFVKFGDLGHAWYVFGKMCDRDLFSWNVLIGGYAKAGFFDEALSLYQRMFWVG 191
+GN+ + M+ K G + A VF ++ DR L SWN +I G+ AG+ +AL + M
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 192 -GVKPDVYTFPCVLRTCGGVPDLKRGKEVHVHVIRFGYE--ADVDVVNALITMYVKCGDL 248
+PD +T +L+ C + GK++H ++R G+ + + +L+ +YVKCG L
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 249 VRARLVFDGMPKRDRISWNAMISGYFENGEYMKGLMLFIMMREVLVDPDFMTLSSVISAS 308
AR FD + ++ ISW+++I GY + GE+++ + LF ++E+ D LSS+I
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 309 ELVGDEKLGREVHGYVIKMGFSDDVSVCNPLIKMYLSFGNREEGEKVFSRMESKDVVSWT 368
+ G+++ +K+ + SV N ++ MYL G +E EK F+ M+ KDV+SWT
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 369 TMISCYEGSVLPDKAVETYQMMEAEGSMPDEITIASVLSACACLGNLDLGIKLHQLAMRT 428
+I+ Y L K+V + M PDE+ +VLSAC+ G + G +L + T
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 429 -GLISYIIIANTLIDMYSKCKCIDKALEVFHQIPDK-NVISWTSII 472
G+ + ++D+ + + +A + +P K NV W +++
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,905,804
Number of Sequences: 539616
Number of extensions: 9259050
Number of successful extensions: 34221
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 25882
Number of HSP's gapped (non-prelim): 2411
length of query: 608
length of database: 191,569,459
effective HSP length: 123
effective length of query: 485
effective length of database: 125,196,691
effective search space: 60720395135
effective search space used: 60720395135
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)