Query 007330
Match_columns 607
No_of_seqs 362 out of 3547
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 23:04:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007330.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007330hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 2.5E-19 1.8E-23 180.7 20.0 326 210-601 41-383 (384)
2 d1xkua_ c.10.2.7 (A:) Decorin 99.8 1.8E-18 1.3E-22 168.5 18.0 263 240-573 11-283 (305)
3 d2omza2 c.10.2.1 (A:33-416) In 99.8 2.7E-18 2E-22 173.1 19.4 321 189-572 43-383 (384)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.7 8.7E-18 6.3E-22 163.5 17.2 248 240-515 32-282 (305)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 3.2E-19 2.4E-23 174.4 6.6 122 214-340 51-175 (313)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 3.8E-19 2.8E-23 173.9 6.9 247 189-485 49-302 (313)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.4E-16 1E-20 151.2 16.7 98 237-344 8-106 (266)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.7 7.1E-16 5.2E-20 146.3 15.7 84 240-331 32-116 (266)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 6.9E-15 5E-19 145.7 20.0 99 191-309 39-137 (353)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 8E-15 5.8E-19 140.5 18.2 210 254-547 20-234 (284)
11 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.1E-14 8.2E-19 134.4 13.9 76 264-343 37-112 (227)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.7E-14 1.3E-18 138.1 15.4 87 240-332 33-122 (284)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 4.8E-14 3.5E-18 139.5 19.1 290 214-576 39-337 (353)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 2E-14 1.5E-18 130.7 11.4 68 254-325 55-122 (210)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 7E-14 5.1E-18 128.9 15.0 85 236-330 38-122 (227)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 5.3E-14 3.9E-18 127.8 13.0 166 265-513 43-208 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.5 6.5E-14 4.7E-18 126.1 12.5 74 266-343 38-111 (199)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.5 9.9E-14 7.2E-18 124.9 13.4 84 237-330 38-121 (199)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 3.3E-13 2.4E-17 125.7 14.6 95 242-344 11-109 (242)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 9E-13 6.6E-17 122.7 13.1 184 239-492 29-219 (242)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.4 2.5E-13 1.8E-17 129.5 6.3 184 264-515 42-235 (284)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.8E-12 1.3E-16 106.1 8.9 102 242-353 1-102 (124)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 8.2E-13 6E-17 113.9 6.7 127 208-345 13-146 (162)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.2E-12 8.9E-17 107.1 7.3 104 216-331 1-106 (124)
25 d2a5yb3 c.37.1.20 (B:109-385) 99.3 2.3E-13 1.6E-17 128.7 1.0 84 1-90 193-276 (277)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 3.6E-12 2.6E-16 109.8 6.1 110 235-353 14-124 (162)
27 d2astb2 c.10.1.3 (B:2136-2419) 99.2 2.8E-12 2E-16 122.1 3.9 139 390-548 89-235 (284)
28 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.2 1.6E-13 1.2E-17 140.7 -5.4 106 191-302 3-123 (460)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 5.5E-11 4E-15 105.8 7.6 120 197-327 15-138 (192)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 1.9E-12 1.4E-16 115.8 -5.5 114 204-329 39-154 (198)
31 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.0 4.1E-10 3E-14 100.0 8.3 130 189-327 28-161 (192)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 6E-12 4.4E-16 112.4 -4.6 109 232-352 41-151 (198)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 2.8E-12 2.1E-16 131.3 -9.6 344 213-573 2-408 (460)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 8.4E-09 6.1E-13 87.6 8.1 21 312-332 77-97 (156)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.7 9.8E-09 7.1E-13 87.1 8.3 107 212-327 7-115 (156)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 5.7E-10 4.1E-14 109.2 0.4 71 390-462 180-254 (344)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 4.4E-09 3.2E-13 102.7 3.4 252 206-487 24-315 (344)
38 d1koha1 c.10.2.3 (A:201-362) m 97.9 6.3E-07 4.6E-11 76.2 -0.4 84 231-321 57-152 (162)
39 d1koha1 c.10.2.3 (A:201-362) m 97.8 1.5E-06 1.1E-10 73.7 0.9 91 257-348 54-156 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.1 0.00013 9.7E-09 61.6 4.2 68 235-302 11-83 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00023 1.6E-08 60.1 4.4 111 211-323 13-139 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.5 0.00073 5.3E-08 56.8 3.9 63 235-298 42-109 (166)
43 d1io0a_ c.10.1.1 (A:) Tropomod 96.2 0.0014 1E-07 55.0 3.7 94 227-321 5-108 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.81 E-value=2.5e-19 Score=180.73 Aligned_cols=326 Identities=19% Similarity=0.224 Sum_probs=202.3
Q ss_pred cCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhc
Q 007330 210 FKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCE 289 (607)
Q Consensus 210 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~ 289 (607)
.++.+|++|.+.++. +.. +.+ +..+++|++|+++ ++.++.+|. ++++++|++|++++|.+..+++ +++
T Consensus 41 ~~l~~l~~L~l~~~~--I~~-l~g-l~~L~nL~~L~Ls------~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i~~-l~~ 108 (384)
T d2omza2 41 TDLDQVTTLQADRLG--IKS-IDG-VEYLNNLTQINFS------NNQLTDITP-LKNLTKLVDILMNNNQIADITP-LAN 108 (384)
T ss_dssp HHHTTCCEEECCSSC--CCC-CTT-GGGCTTCCEEECC------SSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-GTT
T ss_pred HHhCCCCEEECCCCC--CCC-ccc-cccCCCCCEEeCc------CCcCCCCcc-ccCCcccccccccccccccccc-ccc
Confidence 356788999998875 322 333 6788899999999 788888864 8889999999999999888865 888
Q ss_pred CCcccEeecCCCCCccccccccccccCcccccccccccccCcCC-----------------CCCCCCCCccCcEEecCCc
Q 007330 290 LFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLDYMPKG-----------------FERLTCLRTLTEFVVSGGK 352 (607)
Q Consensus 290 L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~~lp~~-----------------i~~l~~L~~L~~~~~~~~~ 352 (607)
+++|+.|+++++. +..++. ......+..+....+.+..+... +..+.............+.
T Consensus 109 l~~L~~L~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (384)
T d2omza2 109 LTNLTGLTLFNNQ-ITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK 186 (384)
T ss_dssp CTTCCEEECCSSC-CCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC
T ss_pred ccccccccccccc-cccccc-ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc
Confidence 9999999998876 555542 33344444444333332221110 0111111111111111111
Q ss_pred cCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCCCCchhcHHHHhhcCCCCCCcceE
Q 007330 353 YSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVAL 432 (607)
Q Consensus 353 ~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L 432 (607)
.........+..+. .+.+.... +... .....+++|+.|+++++.... ++.+..+++|+.|
T Consensus 187 ----~~~~~~~~~l~~~~-~l~l~~n~-i~~~-----~~~~~~~~L~~L~l~~n~l~~---------~~~l~~l~~L~~L 246 (384)
T d2omza2 187 ----VSDISVLAKLTNLE-SLIATNNQ-ISDI-----TPLGILTNLDELSLNGNQLKD---------IGTLASLTNLTDL 246 (384)
T ss_dssp ----CCCCGGGGGCTTCS-EEECCSSC-CCCC-----GGGGGCTTCCEEECCSSCCCC---------CGGGGGCTTCSEE
T ss_pred ----cccccccccccccc-eeeccCCc-cCCC-----CcccccCCCCEEECCCCCCCC---------cchhhcccccchh
Confidence 11111222233333 44443322 1221 124567788888888876522 2345667888999
Q ss_pred EEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCCCCCCCCCCeeEecCCcCeeeCccccCCCCCCccCCCccceeee
Q 007330 433 DILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSPLGKLPSLETLYIAGMSGKRVGDEFFGIGSDCNIAFPKLKFLRV 512 (607)
Q Consensus 433 ~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l 512 (607)
++.+|...+ ++. +..+++|+.|+++++.. ..++.+..++.++.+.+..|.+..+.. + ..+++++.|++
T Consensus 247 ~l~~n~l~~-~~~-~~~~~~L~~L~l~~~~l-~~~~~~~~~~~l~~l~~~~n~l~~~~~--~-------~~~~~l~~L~l 314 (384)
T d2omza2 247 DLANNQISN-LAP-LSGLTKLTELKLGANQI-SNISPLAGLTALTNLELNENQLEDISP--I-------SNLKNLTYLTL 314 (384)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCSEEECCSSCC-CCCGGGTTCTTCSEEECCSSCCSCCGG--G-------GGCTTCSEEEC
T ss_pred ccccCccCC-CCc-ccccccCCEeeccCccc-CCCCccccccccccccccccccccccc--c-------chhcccCeEEC
Confidence 999888776 443 67788899999988753 344557778888888888877554432 1 26778888888
Q ss_pred ccccccccccccccccCcccccccCCccceeeeecccCccccCCCCCCCCCcCeEEEecCcchhHhhhcCCCCCCCcccc
Q 007330 513 VDMFEWEEWGFGITRSNVKEDVMVMPCLNYLDIQFCFKLKALPGYLLEITALEKLEILCCPILEQRYRKGTGEDWAKVAH 592 (607)
Q Consensus 513 ~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~ 592 (607)
+++ .++.+.. +..+|+|++|++++| .++.+| .+..+++|++|++++|+ ++.. ..+..+.+
T Consensus 315 s~n-~l~~l~~----------l~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L~~L~l~~N~-l~~l------~~l~~l~~ 374 (384)
T d2omza2 315 YFN-NISDISP----------VSSLTKLQRLFFANN-KVSDVS-SLANLTNINWLSAGHNQ-ISDL------TPLANLTR 374 (384)
T ss_dssp CSS-CCSCCGG----------GGGCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECCSSC-CCBC------GGGTTCTT
T ss_pred CCC-CCCCCcc----------cccCCCCCEEECCCC-CCCCCh-hHcCCCCCCEEECCCCc-CCCC------hhhccCCC
Confidence 876 4554431 447888888888887 577776 46778888888888774 3322 12455566
Q ss_pred cCeeEeCce
Q 007330 593 VPTITINRQ 601 (607)
Q Consensus 593 ip~~~~~~~ 601 (607)
+..+.+++|
T Consensus 375 L~~L~L~~N 383 (384)
T d2omza2 375 ITQLGLNDQ 383 (384)
T ss_dssp CSEEECCCE
T ss_pred CCEeeCCCC
Confidence 667776654
No 2
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=1.8e-18 Score=168.49 Aligned_cols=263 Identities=17% Similarity=0.163 Sum_probs=182.7
Q ss_pred ceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCch-hhhcCCcccEeecCCCCCcccc-ccccccccCc
Q 007330 240 CLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPD-IVCELFNLQTLEVEHCPRLKRL-PQGIGKLVNL 317 (607)
Q Consensus 240 ~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~l-p~~i~~l~~L 317 (607)
.+++++-+ +..++.+|..+. +++++|+|++|.++++|+ .+.++++|++|++++|. +..+ |..+.++++|
T Consensus 11 ~~~~~~C~------~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~-~~~i~~~~f~~l~~L 81 (305)
T d1xkua_ 11 HLRVVQCS------DLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAPLVKL 81 (305)
T ss_dssp ETTEEECT------TSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTTTTTCTTC
T ss_pred cCCEEEec------CCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhcccccccccccccc-ccccchhhhhCCCcc
Confidence 45667777 777888988764 689999999999999986 58899999999999988 5555 5668899999
Q ss_pred ccccccccccccCcCCCCCCCCCCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCC
Q 007330 318 RHLIYYYSNLDYMPKGFERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRN 397 (607)
Q Consensus 318 ~~L~~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~ 397 (607)
++|+++.|+++.+|..+. ..+..|. ...+.+..... ..+.....
T Consensus 82 ~~L~l~~n~l~~l~~~~~--~~l~~L~---~~~n~l~~l~~-------------------------------~~~~~~~~ 125 (305)
T d1xkua_ 82 ERLYLSKNQLKELPEKMP--KTLQELR---VHENEITKVRK-------------------------------SVFNGLNQ 125 (305)
T ss_dssp CEEECCSSCCSBCCSSCC--TTCCEEE---CCSSCCCBBCH-------------------------------HHHTTCTT
T ss_pred CEecccCCccCcCccchh--hhhhhhh---ccccchhhhhh-------------------------------hhhhcccc
Confidence 999999999988886543 3344443 33333211111 11112222
Q ss_pred CcceEEEecCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcC-CCCCCCCCC
Q 007330 398 VVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEIL-SPLGKLPSL 476 (607)
Q Consensus 398 L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~-~~l~~l~~L 476 (607)
+..+....+.... .......+..+++|+.+.+.++.... +|.. .+++|+.|++++|...... ..+..++++
T Consensus 126 ~~~l~~~~n~~~~-----~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l 197 (305)
T d1xkua_ 126 MIVVELGTNPLKS-----SGIENGAFQGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNL 197 (305)
T ss_dssp CCEEECCSSCCCG-----GGBCTTGGGGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTC
T ss_pred ccccccccccccc-----cCCCccccccccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhccccc
Confidence 3333332222110 11112345566788888888888776 6654 4688999999988755443 347788899
Q ss_pred CeeEecCCcCeeeCccccCCCCCCccCCCccceeeeccccccccccccccccCcccccccCCccceeeeecccCccccCC
Q 007330 477 ETLYIAGMSGKRVGDEFFGIGSDCNIAFPKLKFLRVVDMFEWEEWGFGITRSNVKEDVMVMPCLNYLDIQFCFKLKALPG 556 (607)
Q Consensus 477 ~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~lp~ 556 (607)
++|++++|.+..++...+. .+++|++|+++++ .++.++.+ +..+++|++|++++| ++++++.
T Consensus 198 ~~L~~s~n~l~~~~~~~~~-------~l~~L~~L~L~~N-~L~~lp~~---------l~~l~~L~~L~Ls~N-~i~~i~~ 259 (305)
T d1xkua_ 198 AKLGLSFNSISAVDNGSLA-------NTPHLRELHLNNN-KLVKVPGG---------LADHKYIQVVYLHNN-NISAIGS 259 (305)
T ss_dssp CEEECCSSCCCEECTTTGG-------GSTTCCEEECCSS-CCSSCCTT---------TTTCSSCCEEECCSS-CCCCCCT
T ss_pred ccccccccccccccccccc-------ccccceeeecccc-cccccccc---------cccccCCCEEECCCC-ccCccCh
Confidence 9999999888877665553 6889999999987 66666655 778899999999985 6888763
Q ss_pred C-------CCCCCCcCeEEEecCc
Q 007330 557 Y-------LLEITALEKLEILCCP 573 (607)
Q Consensus 557 ~-------~~~l~~L~~L~l~~c~ 573 (607)
. ...+++|+.|+++++|
T Consensus 260 ~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 260 NDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp TSSSCSSCCTTSCCCSEEECCSSS
T ss_pred hhccCcchhcccCCCCEEECCCCc
Confidence 2 2346789999999887
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=2.7e-18 Score=173.06 Aligned_cols=321 Identities=17% Similarity=0.173 Sum_probs=217.2
Q ss_pred cCceeEEEEEeCCCCCccccccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcc
Q 007330 189 LEKFRHSMLVLGRRASFPVSIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLV 268 (607)
Q Consensus 189 ~~~~r~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~ 268 (607)
..+++++.+.++.+..+ ..+..+++|++|++++|. +.. ++. +.++++|++|+++ ++.+..++ .++.++
T Consensus 43 l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~--l~~-l~~-l~~L~~L~~L~L~------~n~i~~i~-~l~~l~ 110 (384)
T d2omza2 43 LDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQ--LTD-ITP-LKNLTKLVDILMN------NNQIADIT-PLANLT 110 (384)
T ss_dssp HTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSC--CCC-CGG-GTTCTTCCEEECC------SSCCCCCG-GGTTCT
T ss_pred hCCCCEEECCCCCCCCc-cccccCCCCCEEeCcCCc--CCC-Ccc-ccCCccccccccc------cccccccc-cccccc
Confidence 56799999999988874 567789999999999996 333 334 8899999999999 78888875 488999
Q ss_pred cccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccc--------------------cccccCcccccccccccc
Q 007330 269 HLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQG--------------------IGKLVNLRHLIYYYSNLD 328 (607)
Q Consensus 269 ~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~--------------------i~~l~~L~~L~~~~~~l~ 328 (607)
+|++|+++++.+..++. ......+..+....+. +..+... +.............+. .
T Consensus 111 ~L~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 187 (384)
T d2omza2 111 NLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNT-ISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK-V 187 (384)
T ss_dssp TCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEE-ECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC-C
T ss_pred ccccccccccccccccc-cccccccccccccccc-ccccccccccccccccccccccchhhhhccccccccccccccc-c
Confidence 99999999999887765 3344555555554433 2211100 0001111111111111 1
Q ss_pred cCcCCCCCCCCCCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCC
Q 007330 329 YMPKGFERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKD 408 (607)
Q Consensus 329 ~lp~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 408 (607)
..+.....+++++. +.++.+.+.... .....++|+ .+.+.+.. ++.. ..+..+++|+.|+++.+..
T Consensus 188 ~~~~~~~~l~~~~~---l~l~~n~i~~~~-~~~~~~~L~----~L~l~~n~-l~~~-----~~l~~l~~L~~L~l~~n~l 253 (384)
T d2omza2 188 SDISVLAKLTNLES---LIATNNQISDIT-PLGILTNLD----ELSLNGNQ-LKDI-----GTLASLTNLTDLDLANNQI 253 (384)
T ss_dssp CCCGGGGGCTTCSE---EECCSSCCCCCG-GGGGCTTCC----EEECCSSC-CCCC-----GGGGGCTTCSEEECCSSCC
T ss_pred ccccccccccccce---eeccCCccCCCC-cccccCCCC----EEECCCCC-CCCc-----chhhcccccchhccccCcc
Confidence 11122333444433 346665544332 123333333 55554432 2222 2466788999999988865
Q ss_pred CCCchhcHHHHhhcCCCCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCCCCCCCCCCeeEecCCcCee
Q 007330 409 EEGEEADHEEIIEALKPHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSPLGKLPSLETLYIAGMSGKR 488 (607)
Q Consensus 409 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~ 488 (607)
.. ...+..+++|+.|+++++.... ++ .+..++.++.+.+..|. ...++.+..+++++.|++++|.++.
T Consensus 254 ~~---------~~~~~~~~~L~~L~l~~~~l~~-~~-~~~~~~~l~~l~~~~n~-l~~~~~~~~~~~l~~L~ls~n~l~~ 321 (384)
T d2omza2 254 SN---------LAPLSGLTKLTELKLGANQISN-IS-PLAGLTALTNLELNENQ-LEDISPISNLKNLTYLTLYFNNISD 321 (384)
T ss_dssp CC---------CGGGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSC-CSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CC---------CCcccccccCCEeeccCcccCC-CC-ccccccccccccccccc-cccccccchhcccCeEECCCCCCCC
Confidence 32 1236678899999999998877 54 36688899999999885 4446667889999999999998766
Q ss_pred eCccccCCCCCCccCCCccceeeeccccccccccccccccCcccccccCCccceeeeecccCccccCCCCCCCCCcCeEE
Q 007330 489 VGDEFFGIGSDCNIAFPKLKFLRVVDMFEWEEWGFGITRSNVKEDVMVMPCLNYLDIQFCFKLKALPGYLLEITALEKLE 568 (607)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~~~~l~~L~~L~ 568 (607)
++. + ..+|+|++|+++++ .++.++ . +..+++|++|++++| +++.+++ +.++++|+.|+
T Consensus 322 l~~--l-------~~l~~L~~L~L~~n-~l~~l~-~---------l~~l~~L~~L~l~~N-~l~~l~~-l~~l~~L~~L~ 379 (384)
T d2omza2 322 ISP--V-------SSLTKLQRLFFANN-KVSDVS-S---------LANLTNINWLSAGHN-QISDLTP-LANLTRITQLG 379 (384)
T ss_dssp CGG--G-------GGCTTCCEEECCSS-CCCCCG-G---------GGGCTTCCEEECCSS-CCCBCGG-GTTCTTCSEEE
T ss_pred Ccc--c-------ccCCCCCEEECCCC-CCCCCh-h---------HcCCCCCCEEECCCC-cCCCChh-hccCCCCCEee
Confidence 542 2 37999999999998 566554 2 568999999999986 6888875 78899999999
Q ss_pred EecC
Q 007330 569 ILCC 572 (607)
Q Consensus 569 l~~c 572 (607)
++++
T Consensus 380 L~~N 383 (384)
T d2omza2 380 LNDQ 383 (384)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 9864
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.75 E-value=8.7e-18 Score=163.50 Aligned_cols=248 Identities=17% Similarity=0.149 Sum_probs=115.5
Q ss_pred ceeEEEecCcccccccccccccc-cccCcccccEEecCCCCcccCc-hhhhcCCcccEeecCCCCCccccccccccccCc
Q 007330 240 CLRALKITGKVSWGQNSIYAIPK-EKEKLVHLRYLKLSLLMREELP-DIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNL 317 (607)
Q Consensus 240 ~L~~L~L~~~~~~~~~~l~~lp~-~~~~l~~L~~L~L~~~~i~~lp-~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L 317 (607)
.+++|+|+ ++.++.+|+ .|.++++|++|++++|.+..++ ..+.++++|++|++++|. ++.+|..+ ...|
T Consensus 32 ~l~~L~Ls------~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~-l~~l~~~~--~~~l 102 (305)
T d1xkua_ 32 DTALLDLQ------NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPEKM--PKTL 102 (305)
T ss_dssp TCCEEECC------SSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CSBCCSSC--CTTC
T ss_pred CCCEEECc------CCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc-cCcCccch--hhhh
Confidence 45555555 555555543 3555555555555555555542 335555555555555554 55555432 2345
Q ss_pred ccccccccccccCcCC-CCCCCCCCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCC
Q 007330 318 RHLIYYYSNLDYMPKG-FERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKR 396 (607)
Q Consensus 318 ~~L~~~~~~l~~lp~~-i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~ 396 (607)
+.|+...+.+..++.. +.....+..+. ...+...........+..++.+. .+.+.+... .... ....+
T Consensus 103 ~~L~~~~n~l~~l~~~~~~~~~~~~~l~---~~~n~~~~~~~~~~~~~~l~~L~-~l~l~~n~l-~~l~------~~~~~ 171 (305)
T d1xkua_ 103 QELRVHENEITKVRKSVFNGLNQMIVVE---LGTNPLKSSGIENGAFQGMKKLS-YIRIADTNI-TTIP------QGLPP 171 (305)
T ss_dssp CEEECCSSCCCBBCHHHHTTCTTCCEEE---CCSSCCCGGGBCTTGGGGCTTCC-EEECCSSCC-CSCC------SSCCT
T ss_pred hhhhccccchhhhhhhhhhccccccccc---cccccccccCCCccccccccccC-ccccccCCc-cccC------cccCC
Confidence 5555444444444321 11111122211 22211111111111122222222 222222110 0000 01234
Q ss_pred CCcceEEEecCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCCCCCCCCC
Q 007330 397 NVVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSPLGKLPSL 476 (607)
Q Consensus 397 ~L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~l~~l~~L 476 (607)
+|+.|+++++.... ..+..+..++.++.|++++|.+....+.++..+++|++|+|++|.....+..+..+++|
T Consensus 172 ~L~~L~l~~n~~~~-------~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L 244 (305)
T d1xkua_ 172 SLTELHLDGNKITK-------VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYI 244 (305)
T ss_dssp TCSEEECTTSCCCE-------ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSC
T ss_pred ccCEEECCCCcCCC-------CChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCC
Confidence 55556555544311 12234556666777777776666644556666777777777777544444456667777
Q ss_pred CeeEecCCcCeeeCccccCCCCCCccCCCccceeeeccc
Q 007330 477 ETLYIAGMSGKRVGDEFFGIGSDCNIAFPKLKFLRVVDM 515 (607)
Q Consensus 477 ~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~ 515 (607)
++|+|++|.++.++...|..... ....++|+.|.++++
T Consensus 245 ~~L~Ls~N~i~~i~~~~f~~~~~-~~~~~~L~~L~L~~N 282 (305)
T d1xkua_ 245 QVVYLHNNNISAIGSNDFCPPGY-NTKKASYSGVSLFSN 282 (305)
T ss_dssp CEEECCSSCCCCCCTTSSSCSSC-CTTSCCCSEEECCSS
T ss_pred CEEECCCCccCccChhhccCcch-hcccCCCCEEECCCC
Confidence 77777777666665544432100 013345555555554
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.75 E-value=3.2e-19 Score=174.43 Aligned_cols=122 Identities=21% Similarity=0.261 Sum_probs=77.5
Q ss_pred CeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccc-cccccccCcccccEEecCCCCcccCc-hhhhcCC
Q 007330 214 KLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIY-AIPKEKEKLVHLRYLKLSLLMREELP-DIVCELF 291 (607)
Q Consensus 214 ~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~-~lp~~~~~l~~L~~L~L~~~~i~~lp-~~i~~L~ 291 (607)
+++.|+++++.......++..+.++++|++|+|++ .+.+. .+|..++++++|++|+|++|.+..++ ..+..+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~-----~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~ 125 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGG-----INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEE-----ETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCT
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccc-----ccccccccccccccccccchhhhccccccccccccccchh
Confidence 46666666654111112344467777777777762 24443 57777777777777777777765543 3466777
Q ss_pred cccEeecCCCCCccccccccccccCcccccccccccc-cCcCCCCCCCCC
Q 007330 292 NLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLD-YMPKGFERLTCL 340 (607)
Q Consensus 292 ~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~-~lp~~i~~l~~L 340 (607)
+|+++++++|.....+|..++++++|++++++.|.+. .+|..+..+.++
T Consensus 126 ~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l 175 (313)
T d1ogqa_ 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTT
T ss_pred hhcccccccccccccCchhhccCcccceeecccccccccccccccccccc
Confidence 7777777777666667777777777777777766664 566655555443
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.75 E-value=3.8e-19 Score=173.89 Aligned_cols=247 Identities=19% Similarity=0.154 Sum_probs=169.9
Q ss_pred cCceeEEEEEeCCCC---CccccccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccc-cccc
Q 007330 189 LEKFRHSMLVLGRRA---SFPVSIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAI-PKEK 264 (607)
Q Consensus 189 ~~~~r~l~l~~~~~~---~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~l-p~~~ 264 (607)
..+|+++.+.+.... .+|..+.++++|++|+++++...... +|..+.++++|++|+++ ++.+..+ |..+
T Consensus 49 ~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~-iP~~i~~L~~L~~L~Ls------~N~l~~~~~~~~ 121 (313)
T d1ogqa_ 49 TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGP-IPPAIAKLTQLHYLYIT------HTNVSGAIPDFL 121 (313)
T ss_dssp CCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESC-CCGGGGGCTTCSEEEEE------EECCEEECCGGG
T ss_pred cEEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccc-cccccccccccchhhhc------cccccccccccc
Confidence 346899999998775 45789999999999999873222223 55669999999999999 7887765 5668
Q ss_pred cCcccccEEecCCCC-cccCchhhhcCCcccEeecCCCCCccccccccccccCc-ccccccccccccC-cCCCCCCCCCC
Q 007330 265 EKLVHLRYLKLSLLM-REELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNL-RHLIYYYSNLDYM-PKGFERLTCLR 341 (607)
Q Consensus 265 ~~l~~L~~L~L~~~~-i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L-~~L~~~~~~l~~l-p~~i~~l~~L~ 341 (607)
..+.+|+++++++|. ...+|..++++++|+++++++|.....+|..+..+.++ +.++.++|++... |..+..+..+
T Consensus 122 ~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~- 200 (313)
T d1ogqa_ 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA- 200 (313)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-
T ss_pred cchhhhcccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 899999999999998 66789999999999999999998666899999998887 6677888888644 3333333211
Q ss_pred ccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCCCCchhcHHHHhh
Q 007330 342 TLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDEEGEEADHEEIIE 421 (607)
Q Consensus 342 ~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 421 (607)
. +.+..+...+.. ...+..+++++.+++..+... ..+.
T Consensus 201 ~---l~l~~~~~~~~~-------------------------------~~~~~~~~~l~~l~~~~~~l~--------~~~~ 238 (313)
T d1ogqa_ 201 F---VDLSRNMLEGDA-------------------------------SVLFGSDKNTQKIHLAKNSLA--------FDLG 238 (313)
T ss_dssp E---EECCSSEEEECC-------------------------------GGGCCTTSCCSEEECCSSEEC--------CBGG
T ss_pred c---cccccccccccc-------------------------------ccccccccccccccccccccc--------cccc
Confidence 1 122222211000 011223344455554444321 1233
Q ss_pred cCCCCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCCCCCCCCCCeeEecCCc
Q 007330 422 ALKPHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSPLGKLPSLETLYIAGMS 485 (607)
Q Consensus 422 ~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~l~~l~~L~~L~L~~~~ 485 (607)
.+..+++|+.|++++|.+.+.+|.+++.+++|++|+|++|.....+|.++.+++|+.+++.+|+
T Consensus 239 ~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence 4566677777777777776557777777777777777777554456666667777777777665
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.4e-16 Score=151.19 Aligned_cols=98 Identities=18% Similarity=0.170 Sum_probs=73.5
Q ss_pred cCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCch-hhhcCCcccEeecCCCCCcccccccccccc
Q 007330 237 YLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPD-IVCELFNLQTLEVEHCPRLKRLPQGIGKLV 315 (607)
Q Consensus 237 ~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~ 315 (607)
....+...+.+ +..++.+|..+. ++|++|+|++|.+..+|. .+.++++|++|+|++|. ++.+| .++.++
T Consensus 8 ~~~~~~~v~C~------~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~-l~~l~-~~~~l~ 77 (266)
T d1p9ag_ 8 KVASHLEVNCD------KRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE-LTKLQ-VDGTLP 77 (266)
T ss_dssp CSTTCCEEECT------TSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSC-CCEEE-CCSCCT
T ss_pred ccCCCeEEEcc------CCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccc-ccccc-cccccc
Confidence 34455556777 677888887664 578888888888888874 47888888888888886 77776 457788
Q ss_pred CcccccccccccccCcCCCCCCCCCCccC
Q 007330 316 NLRHLIYYYSNLDYMPKGFERLTCLRTLT 344 (607)
Q Consensus 316 ~L~~L~~~~~~l~~lp~~i~~l~~L~~L~ 344 (607)
+|++|+++.|.+...+..+..+++|+.|.
T Consensus 78 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 106 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQSLPLLGQTLPALTVLD 106 (266)
T ss_dssp TCCEEECCSSCCSSCCCCTTTCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccc
Confidence 88888888888877777666666666554
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7.1e-16 Score=146.30 Aligned_cols=84 Identities=24% Similarity=0.228 Sum_probs=48.8
Q ss_pred ceeEEEecCccccccccccccc-ccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCcc
Q 007330 240 CLRALKITGKVSWGQNSIYAIP-KEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLR 318 (607)
Q Consensus 240 ~L~~L~L~~~~~~~~~~l~~lp-~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~ 318 (607)
+|++|+|+ +|.++.+| ..|.++++|++|+|++|.++.+|. ++.+++|++|+|++|. +...|..+..+++|+
T Consensus 32 ~l~~L~Ls------~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N~-l~~~~~~~~~l~~L~ 103 (266)
T d1p9ag_ 32 DTTILHLS------ENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQ-LQSLPLLGQTLPALT 103 (266)
T ss_dssp TCCEEECT------TSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSC-CSSCCCCTTTCTTCC
T ss_pred CCCEEECc------CCcCCCcCHHHhhcccccccccccccccccccc-cccccccccccccccc-ccccccccccccccc
Confidence 45566666 55555554 345566666666666666665553 3556666666666654 555555556666666
Q ss_pred cccccccccccCc
Q 007330 319 HLIYYYSNLDYMP 331 (607)
Q Consensus 319 ~L~~~~~~l~~lp 331 (607)
.|+++.+.+..++
T Consensus 104 ~L~l~~~~~~~~~ 116 (266)
T d1p9ag_ 104 VLDVSFNRLTSLP 116 (266)
T ss_dssp EEECCSSCCCCCC
T ss_pred cccccccccceee
Confidence 6665555554443
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.62 E-value=6.9e-15 Score=145.70 Aligned_cols=99 Identities=24% Similarity=0.271 Sum_probs=52.4
Q ss_pred ceeEEEEEeCCCCCccccccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccc
Q 007330 191 KFRHSMLVLGRRASFPVSIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHL 270 (607)
Q Consensus 191 ~~r~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L 270 (607)
++++|.++++.+..+|.. .++|++|++++|. +.. ++. .+.+|+.|+++ ++.++.++. + .+.|
T Consensus 39 ~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~--l~~-lp~---~~~~L~~L~l~------~n~l~~l~~-l--p~~L 100 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL---PPHLESLVASCNS--LTE-LPE---LPQSLKSLLVD------NNNLKALSD-L--PPLL 100 (353)
T ss_dssp TCSEEECTTSCCSCCCSC---CTTCSEEECCSSC--CSS-CCC---CCTTCCEEECC------SSCCSCCCS-C--CTTC
T ss_pred CCCEEEeCCCCCCCCCCC---CCCCCEEECCCCC--Ccc-ccc---chhhhhhhhhh------hcccchhhh-h--cccc
Confidence 355666666666555432 3556666666654 222 222 23456666666 455544432 1 1346
Q ss_pred cEEecCCCCcccCchhhhcCCcccEeecCCCCCcccccc
Q 007330 271 RYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQ 309 (607)
Q Consensus 271 ~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~ 309 (607)
++|++++|.+..+|. ++++++|++|++++|. +...|.
T Consensus 101 ~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~-~~~~~~ 137 (353)
T d1jl5a_ 101 EYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNS-LKKLPD 137 (353)
T ss_dssp CEEECCSSCCSSCCC-CTTCTTCCEEECCSSC-CSCCCC
T ss_pred ccccccccccccccc-hhhhccceeecccccc-cccccc
Confidence 666666666666654 4566666666666655 444443
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=8e-15 Score=140.48 Aligned_cols=210 Identities=18% Similarity=0.099 Sum_probs=115.1
Q ss_pred ccccccccccccCcccccEEecCCCCcccCch-hhhcCCcccEeecCCCCCccccccc-cccccCccccc-ccccccccC
Q 007330 254 QNSIYAIPKEKEKLVHLRYLKLSLLMREELPD-IVCELFNLQTLEVEHCPRLKRLPQG-IGKLVNLRHLI-YYYSNLDYM 330 (607)
Q Consensus 254 ~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~~l~~lp~~-i~~l~~L~~L~-~~~~~l~~l 330 (607)
+..++.+|..+. ..+++|+|++|.++++|+ .+.++++|++|++++|. +..++.. +..+..+++++ ...+.+..+
T Consensus 20 ~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~-l~~i~~~~~~~~~~~~~l~~~~~~~~~~l 96 (284)
T d1ozna_ 20 QQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV-LARIDAAAFTGLALLEQLDLSDNAQLRSV 96 (284)
T ss_dssp SSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSCTTCCCC
T ss_pred CCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 556777776553 567888888888888875 47788888888888776 5555433 35566666665 444455444
Q ss_pred cC-CCCCCCCCCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCC
Q 007330 331 PK-GFERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDE 409 (607)
Q Consensus 331 p~-~i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 409 (607)
+. .+..+++|+.|. ++.+....
T Consensus 97 ~~~~~~~l~~L~~L~---l~~n~~~~------------------------------------------------------ 119 (284)
T d1ozna_ 97 DPATFHGLGRLHTLH---LDRCGLQE------------------------------------------------------ 119 (284)
T ss_dssp CTTTTTTCTTCCEEE---CTTSCCCC------------------------------------------------------
T ss_pred cchhhcccccCCEEe---cCCccccc------------------------------------------------------
Confidence 32 233444444332 33222000
Q ss_pred CCchhcHHHHhhcCCCCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcC-CCCCCCCCCCeeEecCCcCee
Q 007330 410 EGEEADHEEIIEALKPHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEIL-SPLGKLPSLETLYIAGMSGKR 488 (607)
Q Consensus 410 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~-~~l~~l~~L~~L~L~~~~~~~ 488 (607)
.....+....+|+.+++.++.+....+..+..+++|+.|++++|...... ..+..+++|+++++.+|.+..
T Consensus 120 --------~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 120 --------LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp --------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred --------ccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 00112334456666777776666522344556666677776666433222 235566666666666666555
Q ss_pred eCccccCCCCCCccCCCccceeeeccccccccccccccccCcccccccCCccceeeeec
Q 007330 489 VGDEFFGIGSDCNIAFPKLKFLRVVDMFEWEEWGFGITRSNVKEDVMVMPCLNYLDIQF 547 (607)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 547 (607)
+....+. .+++|++|+++++. +..++.. .+..+++|++|++++
T Consensus 192 i~~~~f~-------~l~~L~~L~l~~N~-i~~~~~~--------~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 192 VHPHAFR-------DLGRLMTLYLFANN-LSALPTE--------ALAPLRALQYLRLND 234 (284)
T ss_dssp ECTTTTT-------TCTTCCEEECCSSC-CSCCCHH--------HHTTCTTCCEEECCS
T ss_pred cChhHhh-------hhhhcccccccccc-ccccccc--------ccccccccCEEEecC
Confidence 5443332 45566666666542 2222211 144556666666655
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.56 E-value=1.1e-14 Score=134.39 Aligned_cols=76 Identities=20% Similarity=0.154 Sum_probs=46.2
Q ss_pred ccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCcccccccccccccCcCCCCCCCCCCcc
Q 007330 264 KEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLDYMPKGFERLTCLRTL 343 (607)
Q Consensus 264 ~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~~lp~~i~~l~~L~~L 343 (607)
+..+.+|++|++.+|.+++++ .+.++++|++|++++|. +..++ .+..+++|+.++++.+.++.++ ++..+++|+.+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~-i~~~~-~l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l 112 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQ-ITDLA-PLKNLTKITELELSGNPLKNVS-AIAGLQSIKTL 112 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSC-CCCCG-GGTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEE
T ss_pred HHHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCce-eeccc-cccccccccccccccccccccc-ccccccccccc
Confidence 445666777777777776663 46677777777777765 55554 3666677777776666655543 23444444433
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.7e-14 Score=138.08 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=53.4
Q ss_pred ceeEEEecCcccccccccccccc-cccCcccccEEecCCCCcccCchh-hhcCCcccEeecCCCCCcccc-ccccccccC
Q 007330 240 CLRALKITGKVSWGQNSIYAIPK-EKEKLVHLRYLKLSLLMREELPDI-VCELFNLQTLEVEHCPRLKRL-PQGIGKLVN 316 (607)
Q Consensus 240 ~L~~L~L~~~~~~~~~~l~~lp~-~~~~l~~L~~L~L~~~~i~~lp~~-i~~L~~L~~L~L~~~~~l~~l-p~~i~~l~~ 316 (607)
.+++|+|+ ++.++.+|. .|.++++|++|+++++.+..++.. +..+..++.++...+..+..+ |..+.++++
T Consensus 33 ~~~~L~Ls------~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~ 106 (284)
T d1ozna_ 33 ASQRIFLH------GNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR 106 (284)
T ss_dssp TCSEEECT------TSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTT
T ss_pred CCCEEECc------CCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhccccc
Confidence 45666666 666666653 466667777777777666655443 455666666666555555555 334566677
Q ss_pred cccccccccccccCcC
Q 007330 317 LRHLIYYYSNLDYMPK 332 (607)
Q Consensus 317 L~~L~~~~~~l~~lp~ 332 (607)
|++|+++.+.+..++.
T Consensus 107 L~~L~l~~n~~~~~~~ 122 (284)
T d1ozna_ 107 LHTLHLDRCGLQELGP 122 (284)
T ss_dssp CCEEECTTSCCCCCCT
T ss_pred CCEEecCCcccccccc
Confidence 7777766666655443
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.56 E-value=4.8e-14 Score=139.49 Aligned_cols=290 Identities=17% Similarity=0.104 Sum_probs=142.6
Q ss_pred CeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcc
Q 007330 214 KLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNL 293 (607)
Q Consensus 214 ~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L 293 (607)
++++|+++++. ... +|. ..++|++|+++ ++.++++|..+ .+|+.|++++|.++.++.- .+.|
T Consensus 39 ~l~~LdLs~~~--L~~-lp~---~~~~L~~L~Ls------~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~l---p~~L 100 (353)
T d1jl5a_ 39 QAHELELNNLG--LSS-LPE---LPPHLESLVAS------CNSLTELPELP---QSLKSLLVDNNNLKALSDL---PPLL 100 (353)
T ss_dssp TCSEEECTTSC--CSC-CCS---CCTTCSEEECC------SSCCSSCCCCC---TTCCEEECCSSCCSCCCSC---CTTC
T ss_pred CCCEEEeCCCC--CCC-CCC---CCCCCCEEECC------CCCCcccccch---hhhhhhhhhhcccchhhhh---cccc
Confidence 46666666654 222 222 23456666666 56666666432 3566666666665555431 1346
Q ss_pred cEeecCCCCCccccccccccccCcccccccccccccCcCCCCCCCCCCccCcEEecCCccCCCcccccccccccccCceE
Q 007330 294 QTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLDYMPKGFERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVF 373 (607)
Q Consensus 294 ~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l 373 (607)
++|++++|. +..+| .++.+++|++|+++++.+...|.....+..+. +.... ......+..+..+. .+
T Consensus 101 ~~L~L~~n~-l~~lp-~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~------~~~~~----~~~~~~l~~l~~l~-~L 167 (353)
T d1jl5a_ 101 EYLGVSNNQ-LEKLP-ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIA------AGNNQ----LEELPELQNLPFLT-AI 167 (353)
T ss_dssp CEEECCSSC-CSSCC-CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEE------CCSSC----CSSCCCCTTCTTCC-EE
T ss_pred ccccccccc-ccccc-chhhhccceeeccccccccccccccccccchh------hcccc----ccccccccccccce-ec
Confidence 666666665 66665 34566666666666665555554433322221 11111 00111111222222 22
Q ss_pred EEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCCCChhhhcCCCc
Q 007330 374 RITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKITFPKWIMSLNNL 453 (607)
Q Consensus 374 ~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l~~l~~L 453 (607)
.+........ .......+.+....... ........++.|+.+.++++.... +|. ...++
T Consensus 168 ~l~~n~~~~~--------~~~~~~~~~l~~~~~~~---------~~~~~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l 226 (353)
T d1jl5a_ 168 YADNNSLKKL--------PDLPLSLESIVAGNNIL---------EELPELQNLPFLTTIYADNNLLKT-LPD---LPPSL 226 (353)
T ss_dssp ECCSSCCSSC--------CCCCTTCCEEECCSSCC---------SSCCCCTTCTTCCEEECCSSCCSS-CCS---CCTTC
T ss_pred cccccccccc--------ccccccccccccccccc---------cccccccccccccccccccccccc-ccc---ccccc
Confidence 2222111000 00001111222211111 112234556778888887776555 553 33456
Q ss_pred cEEEEecCCCCCcCCCCCCCCCCCeeEecCCcCeeeCcc---ccC------CCCCCccCCCccceeeecccccccccccc
Q 007330 454 KSLHLRSCEKCEILSPLGKLPSLETLYIAGMSGKRVGDE---FFG------IGSDCNIAFPKLKFLRVVDMFEWEEWGFG 524 (607)
Q Consensus 454 ~~L~L~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~---~~~------~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 524 (607)
..+.+..+....... ..+++....+..+....+... ... ........+++|++|+++++ .+..++.
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N-~l~~lp~- 301 (353)
T d1jl5a_ 227 EALNVRDNYLTDLPE---LPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNN-KLIELPA- 301 (353)
T ss_dssp CEEECCSSCCSCCCC---CCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSS-CCSCCCC-
T ss_pred ccccccccccccccc---ccccccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCC-ccCcccc-
Confidence 666666654332221 223344444443332222111 000 00000124688999999987 5665553
Q ss_pred ccccCcccccccCCccceeeeecccCccccCCCCCCCCCcCeEEEecCcchh
Q 007330 525 ITRSNVKEDVMVMPCLNYLDIQFCFKLKALPGYLLEITALEKLEILCCPILE 576 (607)
Q Consensus 525 ~~~~~~~~~~~~~~~L~~L~l~~c~~l~~lp~~~~~l~~L~~L~l~~c~~l~ 576 (607)
.+++|+.|++++| .++++|.. +++|++|++++|+ ++
T Consensus 302 -----------~~~~L~~L~L~~N-~L~~l~~~---~~~L~~L~L~~N~-L~ 337 (353)
T d1jl5a_ 302 -----------LPPRLERLIASFN-HLAEVPEL---PQNLKQLHVEYNP-LR 337 (353)
T ss_dssp -----------CCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSSC-CS
T ss_pred -----------ccCCCCEEECCCC-cCCccccc---cCCCCEEECcCCc-CC
Confidence 4689999999886 68888864 5689999999987 54
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.52 E-value=2e-14 Score=130.71 Aligned_cols=68 Identities=19% Similarity=0.176 Sum_probs=30.4
Q ss_pred ccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCccccccccc
Q 007330 254 QNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYS 325 (607)
Q Consensus 254 ~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~ 325 (607)
++.++.++ .+..+++|++|++++|.++.+++ ++++++|++|++++|. ++.+| .+..+++|+.|++..+
T Consensus 55 ~~~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L~~L~l~~~ 122 (210)
T d1h6ta2 55 NSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLSLEHN 122 (210)
T ss_dssp TSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEECTTS
T ss_pred CCCCCCch-hHhhCCCCCEEeCCCccccCccc-cccCcccccccccccc-ccccc-cccccccccccccccc
Confidence 34444432 24444444555554444444432 3444445555544443 44443 3444444444444333
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.52 E-value=7e-14 Score=128.94 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=64.0
Q ss_pred ccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCcccccccccccc
Q 007330 236 DYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLV 315 (607)
Q Consensus 236 ~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~ 315 (607)
..+.+|+.|++. ++.++.++ .+..+++|++|++++|.+..+++ +.++++|+++++++|. ++.++ .+..++
T Consensus 38 ~~l~~L~~L~l~------~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~-~~~i~-~l~~l~ 107 (227)
T d1h6ua2 38 ADLDGITTLSAF------GTGVTTIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNP-LKNVS-AIAGLQ 107 (227)
T ss_dssp HHHHTCCEEECT------TSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCC-CSCCG-GGTTCT
T ss_pred HHcCCcCEEECC------CCCCCcch-hHhcCCCCcEeecCCceeecccc-cccccccccccccccc-ccccc-cccccc
Confidence 456678888888 67777774 57788888888888888877754 7888888888888876 66665 577888
Q ss_pred CcccccccccccccC
Q 007330 316 NLRHLIYYYSNLDYM 330 (607)
Q Consensus 316 ~L~~L~~~~~~l~~l 330 (607)
+|+.++++++....+
T Consensus 108 ~L~~l~l~~~~~~~~ 122 (227)
T d1h6ua2 108 SIKTLDLTSTQITDV 122 (227)
T ss_dssp TCCEEECTTSCCCCC
T ss_pred ccccccccccccccc
Confidence 888888766655443
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=5.3e-14 Score=127.82 Aligned_cols=166 Identities=18% Similarity=0.199 Sum_probs=111.1
Q ss_pred cCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCcccccccccccccCcCCCCCCCCCCccC
Q 007330 265 EKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLDYMPKGFERLTCLRTLT 344 (607)
Q Consensus 265 ~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~~lp~~i~~l~~L~~L~ 344 (607)
..+..|++|++++|.++.++. +..+++|++|++++|. ++.++ .++.+++|++|+++.|.++.+| .+..+++|+.|.
T Consensus 43 ~~L~~L~~L~l~~~~i~~l~~-l~~l~~L~~L~L~~n~-i~~l~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 43 NELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNK-LTDIK-PLANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSC-CCCCG-GGTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEE
T ss_pred HHhcCccEEECcCCCCCCchh-HhhCCCCCEEeCCCcc-ccCcc-ccccCccccccccccccccccc-cccccccccccc
Confidence 357889999999999998864 8899999999999997 88887 5789999999999889888876 456666665554
Q ss_pred cEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCCCCchhcHHHHhhcCC
Q 007330 345 EFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDEEGEEADHEEIIEALK 424 (607)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~ 424 (607)
+.++.... + ..+.
T Consensus 119 ---l~~~~~~~----~------------------------------------------------------------~~l~ 131 (210)
T d1h6ta2 119 ---LEHNGISD----I------------------------------------------------------------NGLV 131 (210)
T ss_dssp ---CTTSCCCC----C------------------------------------------------------------GGGG
T ss_pred ---cccccccc----c------------------------------------------------------------cccc
Confidence 44443110 0 0122
Q ss_pred CCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCCCCCCCCCCeeEecCCcCeeeCccccCCCCCCccCC
Q 007330 425 PHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSPLGKLPSLETLYIAGMSGKRVGDEFFGIGSDCNIAF 504 (607)
Q Consensus 425 ~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~ 504 (607)
.+++++.++++++.... +..+..+++|+.+++++|.. ..++.+..+++|+.|++++|.++.++. + ..+
T Consensus 132 ~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l-~~i~~l~~l~~L~~L~Ls~N~i~~l~~--l-------~~l 199 (210)
T d1h6ta2 132 HLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQI-SDIVPLAGLTKLQNLYLSKNHISDLRA--L-------AGL 199 (210)
T ss_dssp GCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCC-CCCGGGTTCTTCCEEECCSSCCCBCGG--G-------TTC
T ss_pred ccccccccccccccccc--cccccccccccccccccccc-cccccccCCCCCCEEECCCCCCCCChh--h-------cCC
Confidence 33455555555555544 34455667777777777643 334456667777777777776555431 1 245
Q ss_pred Cccceeeec
Q 007330 505 PKLKFLRVV 513 (607)
Q Consensus 505 ~~L~~L~l~ 513 (607)
++|++|+|+
T Consensus 200 ~~L~~L~Ls 208 (210)
T d1h6ta2 200 KNLDVLELF 208 (210)
T ss_dssp TTCSEEEEE
T ss_pred CCCCEEEcc
Confidence 666666654
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=6.5e-14 Score=126.11 Aligned_cols=74 Identities=19% Similarity=0.210 Sum_probs=42.7
Q ss_pred CcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCcccccccccccccCcCCCCCCCCCCcc
Q 007330 266 KLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNLDYMPKGFERLTCLRTL 343 (607)
Q Consensus 266 ~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l~~lp~~i~~l~~L~~L 343 (607)
.+.++++|+++++.+.+++ .+..+++|++|++++|. ++.++ .++++++|++|+++.+.+..++. +..+++|+.|
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~-l~~~~-~l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQ-LTDIT-PLKNLTKLVDILMNNNQIADITP-LANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSC-CCCCG-GGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCCcc-ccccCCCcCcCcccccc-ccCcc-cccCCcccccccccccccccccc-cccccccccc
Confidence 4556666666666666653 35666666666666664 55554 36666666666666666555542 3444444333
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=9.9e-14 Score=124.89 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=66.5
Q ss_pred cCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccC
Q 007330 237 YLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVN 316 (607)
Q Consensus 237 ~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~ 316 (607)
.+.++++|+++ ++.++.++ .+..+++|++|++++|.++.+++ ++++++|++|++++|. +..+| .+..+++
T Consensus 38 ~l~~l~~L~l~------~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~-~~~~~-~l~~l~~ 107 (199)
T d2omxa2 38 DLDQVTTLQAD------RLGIKSID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ-IADIT-PLANLTN 107 (199)
T ss_dssp HHTTCCEEECT------TSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCCG-GGTTCTT
T ss_pred HhcCCCEEECC------CCCCCCcc-ccccCCCcCcCccccccccCccc-ccCCcccccccccccc-ccccc-ccccccc
Confidence 46788888888 77777774 57788889999999888888875 8888899999998887 67776 5788888
Q ss_pred cccccccccccccC
Q 007330 317 LRHLIYYYSNLDYM 330 (607)
Q Consensus 317 L~~L~~~~~~l~~l 330 (607)
|+.|+++++....+
T Consensus 108 L~~L~l~~~~~~~~ 121 (199)
T d2omxa2 108 LTGLTLFNNQITDI 121 (199)
T ss_dssp CSEEECCSSCCCCC
T ss_pred cccccccccccccc
Confidence 88888777665443
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=3.3e-13 Score=125.75 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=57.1
Q ss_pred eEEEecCcccccccccccccccccCcccccEEecCCCCcccCchh-hhcCCcccEeecCCCCCcccccc-ccccccCccc
Q 007330 242 RALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDI-VCELFNLQTLEVEHCPRLKRLPQ-GIGKLVNLRH 319 (607)
Q Consensus 242 ~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~-i~~L~~L~~L~L~~~~~l~~lp~-~i~~l~~L~~ 319 (607)
++++.+ +..++.+|..+. .++++|++++|.++.+|.. +.++++|++|++++|.....+|. .+..++++++
T Consensus 11 ~~i~c~------~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~ 82 (242)
T d1xwdc1 11 RVFLCQ------ESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE 82 (242)
T ss_dssp SEEEEE------SCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCE
T ss_pred CEEEEe------CCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccc
Confidence 456666 556667776542 4677777777777777663 67777777777777764444433 3566777777
Q ss_pred cc-ccccccccCcCC-CCCCCCCCccC
Q 007330 320 LI-YYYSNLDYMPKG-FERLTCLRTLT 344 (607)
Q Consensus 320 L~-~~~~~l~~lp~~-i~~l~~L~~L~ 344 (607)
|. ..++++..++.. +..+++|+.+.
T Consensus 83 l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 83 IRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp EEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred ccccccccccccccccccccccccccc
Confidence 76 445555544432 33444444433
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=9e-13 Score=122.71 Aligned_cols=184 Identities=14% Similarity=0.102 Sum_probs=115.1
Q ss_pred CceeEEEecCcccccccccccccc-cccCcccccEEecCCCCccc-Cch-hhhcCCcccEeecCCCCCccccc-cccccc
Q 007330 239 TCLRALKITGKVSWGQNSIYAIPK-EKEKLVHLRYLKLSLLMREE-LPD-IVCELFNLQTLEVEHCPRLKRLP-QGIGKL 314 (607)
Q Consensus 239 ~~L~~L~L~~~~~~~~~~l~~lp~-~~~~l~~L~~L~L~~~~i~~-lp~-~i~~L~~L~~L~L~~~~~l~~lp-~~i~~l 314 (607)
+++++|+++ ++.++.+|. .|.++++|++|++++|.+.. +|. .+.+++++++|++..+..+..++ ..+..+
T Consensus 29 ~~l~~L~Ls------~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l 102 (242)
T d1xwdc1 29 RNAIELRFV------LTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNL 102 (242)
T ss_dssp SCCSEEEEE------SCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECC
T ss_pred CCCCEEECc------CCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccc
Confidence 467888888 777877765 47788888888888887654 333 46788888888877655566554 446888
Q ss_pred cCcccccccccccccCcCCCCCCCCCCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcC
Q 007330 315 VNLRHLIYYYSNLDYMPKGFERLTCLRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEK 394 (607)
Q Consensus 315 ~~L~~L~~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~ 394 (607)
++|++|++..+.+...+. ...+.+++.+.........+.. +.
T Consensus 103 ~~L~~l~l~~~~l~~~~~-~~~~~~l~~l~~~~~~n~~l~~-------------i~------------------------ 144 (242)
T d1xwdc1 103 PNLQYLLISNTGIKHLPD-VHKIHSLQKVLLDIQDNINIHT-------------IE------------------------ 144 (242)
T ss_dssp TTCCEEEEESCCCCSCCC-CTTTCBSSCEEEEEESCTTCCE-------------EC------------------------
T ss_pred ccccccccchhhhccccc-cccccccccccccccccccccc-------------cc------------------------
Confidence 899999888877766543 3445555555433333222100 00
Q ss_pred CCCCcceEEEecCCCCCchhcHHHHhhcCC-CCCCcceEEEeecCCCCCCChhhhcCCCccEEEEecCCCCCcCCC--CC
Q 007330 395 KRNVVDLGLWFDKDEEGEEADHEEIIEALK-PHSNLVALDILGFKGKITFPKWIMSLNNLKSLHLRSCEKCEILSP--LG 471 (607)
Q Consensus 395 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~-~~~~L~~L~l~~~~~~~~lp~~l~~l~~L~~L~L~~~~~~~~~~~--l~ 471 (607)
...+. ....++.|.+.++.... ++......++++++....+..++.++. +.
T Consensus 145 -------------------------~~~~~~~~~~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~ 198 (242)
T d1xwdc1 145 -------------------------RNSFVGLSFESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFH 198 (242)
T ss_dssp -------------------------TTSSTTSBSSCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTT
T ss_pred -------------------------ccccccccccceeeecccccccc-cccccccchhhhccccccccccccccHHHhc
Confidence 00011 12356666776666665 555555566666665444444444433 67
Q ss_pred CCCCCCeeEecCCcCeeeCcc
Q 007330 472 KLPSLETLYIAGMSGKRVGDE 492 (607)
Q Consensus 472 ~l~~L~~L~L~~~~~~~~~~~ 492 (607)
.+++|++|+|++|.++.++..
T Consensus 199 ~l~~L~~L~Ls~N~l~~l~~~ 219 (242)
T d1xwdc1 199 GASGPVILDISRTRIHSLPSY 219 (242)
T ss_dssp TSCCCSEEECTTSCCCCCCSS
T ss_pred CCCCCCEEECCCCcCCccCHH
Confidence 788888888888887766653
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=2.5e-13 Score=129.48 Aligned_cols=184 Identities=18% Similarity=0.136 Sum_probs=104.0
Q ss_pred ccCcccccEEecCCCCcc--cCchhhhcCCcccEeecCCCCCccccccccccccCcccccccc-cccccCcCCCCCCCCC
Q 007330 264 KEKLVHLRYLKLSLLMRE--ELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYY-SNLDYMPKGFERLTCL 340 (607)
Q Consensus 264 ~~~l~~L~~L~L~~~~i~--~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~-~~l~~lp~~i~~l~~L 340 (607)
.....+|++|++++|.+. .++..+.++++|++|++++|..-...+..++++++|++|++++ +.++.
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd----------- 110 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE----------- 110 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH-----------
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccc-----------
Confidence 345568888888888753 3455577888888888888863334555666777777777433 22210
Q ss_pred CccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCCHhHHHHHHhcCCCCCcceEEEecCCCCCchhcHHHHh
Q 007330 341 RTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTDVDEAENAELEKKRNVVDLGLWFDKDEEGEEADHEEII 420 (607)
Q Consensus 341 ~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 420 (607)
.........+++|++|++++|.... ...+.
T Consensus 111 ---------------------------------------------~~l~~l~~~~~~L~~L~ls~c~~~~-----~~~~~ 140 (284)
T d2astb2 111 ---------------------------------------------FALQTLLSSCSRLDELNLSWCFDFT-----EKHVQ 140 (284)
T ss_dssp ---------------------------------------------HHHHHHHHHCTTCCEEECCCCTTCC-----HHHHH
T ss_pred ---------------------------------------------cccchhhHHHHhccccccccccccc-----cccch
Confidence 0111112234555555555543211 11111
Q ss_pred hcC-CCCCCcceEEEeecCCC-C--CCChhhhcCCCccEEEEecCCCCC--cCCCCCCCCCCCeeEecCCc-CeeeCccc
Q 007330 421 EAL-KPHSNLVALDILGFKGK-I--TFPKWIMSLNNLKSLHLRSCEKCE--ILSPLGKLPSLETLYIAGMS-GKRVGDEF 493 (607)
Q Consensus 421 ~~l-~~~~~L~~L~l~~~~~~-~--~lp~~l~~l~~L~~L~L~~~~~~~--~~~~l~~l~~L~~L~L~~~~-~~~~~~~~ 493 (607)
..+ ...++|+.|+++++... . .+......+++|++|++++|...+ .+..+..+++|++|++++|. +++..-..
T Consensus 141 ~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~ 220 (284)
T d2astb2 141 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 220 (284)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred hhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHH
Confidence 111 12467888888875321 1 122233467888888888876443 44556777888888888775 43322111
Q ss_pred cCCCCCCccCCCccceeeeccc
Q 007330 494 FGIGSDCNIAFPKLKFLRVVDM 515 (607)
Q Consensus 494 ~~~~~~~~~~~~~L~~L~l~~~ 515 (607)
+ ..+|+|+.|++.+|
T Consensus 221 L-------~~~~~L~~L~l~~~ 235 (284)
T d2astb2 221 L-------GEIPTLKTLQVFGI 235 (284)
T ss_dssp G-------GGCTTCCEEECTTS
T ss_pred H-------hcCCCCCEEeeeCC
Confidence 1 24667777777665
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.32 E-value=1.8e-12 Score=106.10 Aligned_cols=102 Identities=21% Similarity=0.309 Sum_probs=62.6
Q ss_pred eEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCccccccccccccCccccc
Q 007330 242 RALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLI 321 (607)
Q Consensus 242 ~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~ 321 (607)
|+|+|+ ++.++.+| .++.+++|++|++++|.++++|+.++.+++|++|++++|. ++.+| +++.+++|++|+
T Consensus 1 R~L~Ls------~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~-~~~~l~~L~~L~ 71 (124)
T d1dcea3 1 RVLHLA------HKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVD-GVANLPRLQELL 71 (124)
T ss_dssp SEEECT------TSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCG-GGTTCSSCCEEE
T ss_pred CEEEcC------CCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccC-ccccccccCeEE
Confidence 466666 66666665 3666677777777777777776666677777777777765 66665 466677777777
Q ss_pred ccccccccCcCCCCCCCCCCccCcEEecCCcc
Q 007330 322 YYYSNLDYMPKGFERLTCLRTLTEFVVSGGKY 353 (607)
Q Consensus 322 ~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~ 353 (607)
++.|.+..+|. +..+..+..|..++++++.+
T Consensus 72 l~~N~i~~~~~-~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 72 LCNNRLQQSAA-IQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCSSCCCSSST-TGGGGGCTTCCEEECTTSGG
T ss_pred CCCCccCCCCC-chhhcCCCCCCEEECCCCcC
Confidence 76666666542 22222333333334665553
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=8.2e-13 Score=113.89 Aligned_cols=127 Identities=17% Similarity=0.083 Sum_probs=86.3
Q ss_pred cccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhh
Q 007330 208 SIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIV 287 (607)
Q Consensus 208 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i 287 (607)
.+.++.++|.|++++|. +.. ++..+..+++|++|+++ +|.++.++ .+..+++|++|++++|.+..+|+.+
T Consensus 13 ~~~n~~~lr~L~L~~n~--I~~-i~~~~~~l~~L~~L~Ls------~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~ 82 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYK--IPV-IENLGATLDQFDAIDFS------DNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGL 82 (162)
T ss_dssp EEECTTSCEEEECTTSC--CCS-CCCGGGGTTCCSEEECC------SSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCH
T ss_pred hccCcCcCcEEECCCCC--CCc-cCccccccccCCEEECC------CCCCCccC-CcccCcchhhhhcccccccCCCccc
Confidence 34566677777777775 322 24445667778888888 67777774 4777778888888888877776653
Q ss_pred -hcCCcccEeecCCCCCcccccc--ccccccCcccccccccccccCcC----CCCCCCCCCccCc
Q 007330 288 -CELFNLQTLEVEHCPRLKRLPQ--GIGKLVNLRHLIYYYSNLDYMPK----GFERLTCLRTLTE 345 (607)
Q Consensus 288 -~~L~~L~~L~L~~~~~l~~lp~--~i~~l~~L~~L~~~~~~l~~lp~----~i~~l~~L~~L~~ 345 (607)
..+++|++|++++|. +..++. .+..+++|++|++++|.+...|. .+..+++|+.|+.
T Consensus 83 ~~~l~~L~~L~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 83 DQALPDLTELILTNNS-LVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp HHHCTTCCEEECCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred cccccccccceecccc-ccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 567788888888776 666553 46677778888777777766653 2455666666653
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.31 E-value=1.2e-12 Score=107.13 Aligned_cols=104 Identities=22% Similarity=0.134 Sum_probs=86.5
Q ss_pred eEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccE
Q 007330 216 RSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQT 295 (607)
Q Consensus 216 ~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~ 295 (607)
|.|++++|. ... ++. +..+++|++|+++ +|.++.+|..++.+++|++|++++|.++.+|. ++++++|++
T Consensus 1 R~L~Ls~n~--l~~-l~~-l~~l~~L~~L~ls------~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l~~L~~ 69 (124)
T d1dcea3 1 RVLHLAHKD--LTV-LCH-LEQLLLVTHLDLS------HNRLRALPPALAALRCLEVLQASDNALENVDG-VANLPRLQE 69 (124)
T ss_dssp SEEECTTSC--CSS-CCC-GGGGTTCCEEECC------SSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCE
T ss_pred CEEEcCCCC--CCC-Ccc-cccCCCCCEEECC------CCccCcchhhhhhhhcccccccccccccccCc-cccccccCe
Confidence 567888876 322 344 7888999999999 88999998889999999999999999999874 899999999
Q ss_pred eecCCCCCccccc--cccccccCcccccccccccccCc
Q 007330 296 LEVEHCPRLKRLP--QGIGKLVNLRHLIYYYSNLDYMP 331 (607)
Q Consensus 296 L~L~~~~~l~~lp--~~i~~l~~L~~L~~~~~~l~~lp 331 (607)
|++++|. +..+| ..++.+++|++|++++|.+...+
T Consensus 70 L~l~~N~-i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~ 106 (124)
T d1dcea3 70 LLLCNNR-LQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106 (124)
T ss_dssp EECCSSC-CCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred EECCCCc-cCCCCCchhhcCCCCCCEEECCCCcCCcCc
Confidence 9999987 77766 35788999999999998887654
No 25
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.28 E-value=2.3e-13 Score=128.75 Aligned_cols=84 Identities=10% Similarity=-0.056 Sum_probs=68.3
Q ss_pred CcccccCCCcccccchHHHHHHHHhcCCChHHHHHHHHHhhccCCChhHHHHHHhcccccccCcCCCCchHHHHhcccCC
Q 007330 1 MFNFTSLLDESEKRKLLYESSKVQQGGVGIKTILHKFGNLLCLRRARKERGSSILDIEMGKLNELENDPLAPLLLSYNDF 80 (607)
Q Consensus 1 ~f~~~~~~~~~~~~~~~~~~~~i~~~c~GlPLal~~~g~~L~~~~~~~~W~~~~~~~~~~~l~~~~~~i~~~L~~SYd~L 80 (607)
||+.+||.+..+ +..++++++||++|+|+||||+++|+.|+.+ +.++| .+..+.+..+ ...++..+|++||++|
T Consensus 193 Lf~~~~~~~~~~-~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k-~~~~~-~~~~~~L~~~---~~~~v~~il~~sY~~L 266 (277)
T d2a5yb3 193 FLEAYGMPMPVG-EKEEDVLNKTIELSSGNPATLMMFFKSCEPK-TFEKM-AQLNNKLESR---GLVGVECITPYSYKSL 266 (277)
T ss_dssp HHHHTSCCCC---CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-SHHHH-HHHHHHHHHH---CSSTTCCCSSSSSSSH
T ss_pred HHHHHhCCccCc-hhhHHHHHHHHHHhCCCHHHHHHHHHHhccC-CHHHH-HHHHHHHhcC---cHHHHHHHHHHHHhcc
Confidence 477788876544 4579999999999999999999999999988 88999 7766654322 2346999999999999
Q ss_pred ChhhHHHhhh
Q 007330 81 PPMIKLCFLY 90 (607)
Q Consensus 81 ~~~~k~cfL~ 90 (607)
|.++|.||=+
T Consensus 267 ~~~lk~c~~~ 276 (277)
T d2a5yb3 267 AMALQRCVEV 276 (277)
T ss_dssp HHHHHHHHHT
T ss_pred cHHHHHHHHh
Confidence 9999999965
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=3.6e-12 Score=109.81 Aligned_cols=110 Identities=21% Similarity=0.198 Sum_probs=90.1
Q ss_pred hccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCcccccccc-cc
Q 007330 235 FDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGI-GK 313 (607)
Q Consensus 235 ~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i-~~ 313 (607)
+.++..||+|+|+ ++.++.+|..+..+++|++|++++|.+.+++ .+..+++|++|++++|. +..+|..+ ..
T Consensus 14 ~~n~~~lr~L~L~------~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~-i~~l~~~~~~~ 85 (162)
T d1a9na_ 14 YTNAVRDRELDLR------GYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNR-ICRIGEGLDQA 85 (162)
T ss_dssp EECTTSCEEEECT------TSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSC-CCEECSCHHHH
T ss_pred ccCcCcCcEEECC------CCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhccccc-ccCCCcccccc
Confidence 5677889999999 8999999877788999999999999999995 48999999999999998 88888765 67
Q ss_pred ccCcccccccccccccCcCCCCCCCCCCccCcEEecCCcc
Q 007330 314 LVNLRHLIYYYSNLDYMPKGFERLTCLRTLTEFVVSGGKY 353 (607)
Q Consensus 314 l~~L~~L~~~~~~l~~lp~~i~~l~~L~~L~~~~~~~~~~ 353 (607)
+++|++|+++.|.+..++. +..+..++.|..+.+.++.+
T Consensus 86 l~~L~~L~L~~N~i~~~~~-l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 86 LPDLTELILTNNSLVELGD-LDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp CTTCCEEECCSCCCCCGGG-GGGGGGCTTCCEEECCSSGG
T ss_pred ccccccceecccccccccc-ccccccccccchhhcCCCcc
Confidence 9999999999999988764 33344444455555777764
No 27
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=2.8e-12 Score=122.12 Aligned_cols=139 Identities=18% Similarity=0.109 Sum_probs=63.2
Q ss_pred HHhcCCCCCcceEEEecCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCC--CChhhh-cCCCccEEEEecCCC-CC
Q 007330 390 AELEKKRNVVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKIT--FPKWIM-SLNNLKSLHLRSCEK-CE 465 (607)
Q Consensus 390 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~--lp~~l~-~l~~L~~L~L~~~~~-~~ 465 (607)
..+..+++|++|+++++...+ ...+......+++|++|++++|..... ++..+. .+++|+.|++++|.. ..
T Consensus 89 ~~l~~~~~L~~L~Ls~c~~it-----d~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~ 163 (284)
T d2astb2 89 NTLAKNSNLVRLNLSGCSGFS-----EFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQ 163 (284)
T ss_dssp HHHTTCTTCSEEECTTCBSCC-----HHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSC
T ss_pred HHHhcCCCCcCcccccccccc-----ccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccc
Confidence 344556666666665543211 111222223345666666666543220 111111 345666666665531 11
Q ss_pred --cCCC-CCCCCCCCeeEecCCc-CeeeCccccCCCCCCccCCCccceeeeccccccccccccccccCcccccccCCccc
Q 007330 466 --ILSP-LGKLPSLETLYIAGMS-GKRVGDEFFGIGSDCNIAFPKLKFLRVVDMFEWEEWGFGITRSNVKEDVMVMPCLN 541 (607)
Q Consensus 466 --~~~~-l~~l~~L~~L~L~~~~-~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~ 541 (607)
.+.. ...+|+|++|++++|. +++.....+ ..+++|++|++++|..+.+-... .+..+|+|+
T Consensus 164 ~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l-------~~~~~L~~L~L~~C~~i~~~~l~--------~L~~~~~L~ 228 (284)
T d2astb2 164 KSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF-------FQLNYLQHLSLSRCYDIIPETLL--------ELGEIPTLK 228 (284)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG-------GGCTTCCEEECTTCTTCCGGGGG--------GGGGCTTCC
T ss_pred cccccccccccccccccccccccCCCchhhhhh-------cccCcCCEEECCCCCCCChHHHH--------HHhcCCCCC
Confidence 1111 2345666666666654 332211111 24566666666666554432211 134556666
Q ss_pred eeeeecc
Q 007330 542 YLDIQFC 548 (607)
Q Consensus 542 ~L~l~~c 548 (607)
.|++++|
T Consensus 229 ~L~l~~~ 235 (284)
T d2astb2 229 TLQVFGI 235 (284)
T ss_dssp EEECTTS
T ss_pred EEeeeCC
Confidence 6666665
No 28
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=1.6e-13 Score=140.74 Aligned_cols=106 Identities=9% Similarity=0.044 Sum_probs=56.6
Q ss_pred ceeEEEEEeCCCCC--ccccccCCCCeeEEEeeccch--hhhhhhhhhhccCCceeEEEecCcccccccccc-----ccc
Q 007330 191 KFRHSMLVLGRRAS--FPVSIFKAKKLRSLLIHSEFE--VSFHVLQGLFDYLTCLRALKITGKVSWGQNSIY-----AIP 261 (607)
Q Consensus 191 ~~r~l~l~~~~~~~--~~~~~~~~~~L~~L~l~~~~~--~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~-----~lp 261 (607)
+++.|.++++.+.. +...+..++++++|.+.+|.- .....+...+..+++|++|+|+ ++.+. .+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs------~N~i~~~~~~~l~ 76 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR------SNELGDVGVHCVL 76 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECT------TCCCHHHHHHHHH
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECc------CCcCChHHHHHHH
Confidence 35566666666542 123344566666777766641 1112334445666677777776 33332 222
Q ss_pred ccccC-cccccEEecCCCCccc-----CchhhhcCCcccEeecCCCC
Q 007330 262 KEKEK-LVHLRYLKLSLLMREE-----LPDIVCELFNLQTLEVEHCP 302 (607)
Q Consensus 262 ~~~~~-l~~L~~L~L~~~~i~~-----lp~~i~~L~~L~~L~L~~~~ 302 (607)
..+.. ..+|++|++++|.++. ++..+..+++|++|++++|.
T Consensus 77 ~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 77 QGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp HTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred HHHhcCCCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 22222 2356777777666543 33445566667777776665
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.10 E-value=5.5e-11 Score=105.85 Aligned_cols=120 Identities=22% Similarity=0.238 Sum_probs=58.3
Q ss_pred EEeCCCCCccccccCCCCeeEEEeeccchhhhh-hhhhhhccCCceeEEEecCcccccccccccc-cccccCcccccEEe
Q 007330 197 LVLGRRASFPVSIFKAKKLRSLLIHSEFEVSFH-VLQGLFDYLTCLRALKITGKVSWGQNSIYAI-PKEKEKLVHLRYLK 274 (607)
Q Consensus 197 l~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~l-p~~~~~l~~L~~L~ 274 (607)
.++.....+|..+ .++++.|++++|. +.. .....|..+++|+.|+++ ++.+..+ +..+..+++|++|+
T Consensus 15 Cs~~~L~~iP~~l--p~~l~~L~Ls~N~--i~~~~~~~~f~~l~~L~~L~L~------~N~i~~~~~~~~~~~~~L~~L~ 84 (192)
T d1w8aa_ 15 CTGRGLKEIPRDI--PLHTTELLLNDNE--LGRISSDGLFGRLPHLVKLELK------RNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp CTTSCCSSCCSCC--CTTCSEEECCSCC--CCSBCCSCSGGGCTTCCEEECC------SSCCCCBCTTTTTTCTTCCEEE
T ss_pred EeCCCcCccCCCC--CCCCCEEEeCCCC--CcccccccccCCCceEeeeecc------ccccccccccccccccccceee
Confidence 3333444444333 1455555555554 211 123334555555555555 4444443 34444555555555
Q ss_pred cCCCCcccCchh-hhcCCcccEeecCCCCCccccccc-cccccCccccccccccc
Q 007330 275 LSLLMREELPDI-VCELFNLQTLEVEHCPRLKRLPQG-IGKLVNLRHLIYYYSNL 327 (607)
Q Consensus 275 L~~~~i~~lp~~-i~~L~~L~~L~L~~~~~l~~lp~~-i~~l~~L~~L~~~~~~l 327 (607)
|++|.+..+|+. +.++++|++|+|++|. ++.+|.+ +..+++|++|+++.|.+
T Consensus 85 Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQ-ISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSC-CCEECTTSSTTCTTCCEEECTTCCB
T ss_pred eccccccccCHHHHhCCCcccccccCCcc-ccccCHHHhcCCccccccccccccc
Confidence 555555555443 4555555555555554 4544433 34555555555554443
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.02 E-value=1.9e-12 Score=115.78 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=65.4
Q ss_pred CccccccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccC
Q 007330 204 SFPVSIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREEL 283 (607)
Q Consensus 204 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~l 283 (607)
.++..+..+++|+.|++++|. +.. ++. +..+++|++|+++ +|.++.+|.....+++|++|++++|.++.+
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~--I~~-i~~-l~~l~~L~~L~Ls------~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l 108 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNN--IEK-ISS-LSGMENLRILSLG------RNLIKKIENLDAVADTLEELWISYNQIASL 108 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEE--ESC-CCC-HHHHTTCCEEECC------EEEECSCSSHHHHHHHCCEEECSEEECCCH
T ss_pred hhhhHHhcccccceeECcccC--CCC-ccc-ccCCccccChhhc------cccccccccccccccccccccccccccccc
Confidence 334455566666666666664 222 222 5556666666666 556666654444445666666666666665
Q ss_pred chhhhcCCcccEeecCCCCCccccc--cccccccCccccccccccccc
Q 007330 284 PDIVCELFNLQTLEVEHCPRLKRLP--QGIGKLVNLRHLIYYYSNLDY 329 (607)
Q Consensus 284 p~~i~~L~~L~~L~L~~~~~l~~lp--~~i~~l~~L~~L~~~~~~l~~ 329 (607)
+ .+.++++|++|++++|. ++.++ ..+..+++|+.|++++|.+..
T Consensus 109 ~-~~~~l~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 109 S-GIEKLVNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp H-HHHHHHHSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred c-cccccccccccccccch-hccccccccccCCCccceeecCCCcccc
Confidence 3 35666666666666665 55544 235566666666666665543
No 31
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.98 E-value=4.1e-10 Score=100.03 Aligned_cols=130 Identities=15% Similarity=-0.028 Sum_probs=101.4
Q ss_pred cCceeEEEEEeCCCCC-c-cccccCCCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCccccccccccccc-cccc
Q 007330 189 LEKFRHSMLVLGRRAS-F-PVSIFKAKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIP-KEKE 265 (607)
Q Consensus 189 ~~~~r~l~l~~~~~~~-~-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp-~~~~ 265 (607)
+..+++|.++++.+.. . ...+..+++|+.|++++|. .....+..+..++.|++|+|+ +|.+..+| ..|.
T Consensus 28 p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~--i~~~~~~~~~~~~~L~~L~Ls------~N~l~~l~~~~F~ 99 (192)
T d1w8aa_ 28 PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ--LTGIEPNAFEGASHIQELQLG------ENKIKEISNKMFL 99 (192)
T ss_dssp CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC--CCCBCTTTTTTCTTCCEEECC------SCCCCEECSSSST
T ss_pred CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccc--cccccccccccccccceeeec------cccccccCHHHHh
Confidence 5789999999999864 2 4567889999999999987 445567778999999999999 89999985 5688
Q ss_pred CcccccEEecCCCCcccCchh-hhcCCcccEeecCCCCCccccccccccccCccccccccccc
Q 007330 266 KLVHLRYLKLSLLMREELPDI-VCELFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNL 327 (607)
Q Consensus 266 ~l~~L~~L~L~~~~i~~lp~~-i~~L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l 327 (607)
++++|++|+|++|.+..+|+. +..+++|++|+|++|. +...+....-...++.+.+..+.+
T Consensus 100 ~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~-~~~~~~~~~~~~~l~~~~l~~~~~ 161 (192)
T d1w8aa_ 100 GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP-FNCNCHLAWFAEWLRKKSLNGGAA 161 (192)
T ss_dssp TCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC-BCCSGGGHHHHHHHHHHCCSGGGC
T ss_pred CCCcccccccCCccccccCHHHhcCCcccccccccccc-cccccchHHHhhhhhhhcccCCCe
Confidence 999999999999999999765 7899999999999997 443222222223345555444444
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.96 E-value=6e-12 Score=112.38 Aligned_cols=109 Identities=23% Similarity=0.295 Sum_probs=91.4
Q ss_pred hhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccCchhhhcCCcccEeecCCCCCcccccccc
Q 007330 232 QGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREELPDIVCELFNLQTLEVEHCPRLKRLPQGI 311 (607)
Q Consensus 232 ~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~~l~~lp~~i 311 (607)
+..+..+++|+.|+|+ ++.++.++ .++.+++|++|++++|.++++|.....+++|++|++++|. ++.++ .+
T Consensus 41 ~~sl~~L~~L~~L~Ls------~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~-i~~l~-~~ 111 (198)
T d1m9la_ 41 DATLSTLKACKHLALS------TNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQ-IASLS-GI 111 (198)
T ss_dssp HHHHHHTTTCCEEECS------EEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEE-CCCHH-HH
T ss_pred hhHHhcccccceeECc------ccCCCCcc-cccCCccccChhhccccccccccccccccccccccccccc-ccccc-cc
Confidence 4458889999999999 88999886 5889999999999999999998777778899999999997 88875 68
Q ss_pred ccccCcccccccccccccCcC--CCCCCCCCCccCcEEecCCc
Q 007330 312 GKLVNLRHLIYYYSNLDYMPK--GFERLTCLRTLTEFVVSGGK 352 (607)
Q Consensus 312 ~~l~~L~~L~~~~~~l~~lp~--~i~~l~~L~~L~~~~~~~~~ 352 (607)
..+++|++|++++|.+..++. .+..+++|+.|. ++++.
T Consensus 112 ~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~---L~~N~ 151 (198)
T d1m9la_ 112 EKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL---LAGNP 151 (198)
T ss_dssp HHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE---ECSSH
T ss_pred cccccccccccccchhccccccccccCCCccceee---cCCCc
Confidence 899999999999999987763 455666666554 77765
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=2.8e-12 Score=131.29 Aligned_cols=344 Identities=17% Similarity=0.079 Sum_probs=185.3
Q ss_pred CCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcccC-----chhh
Q 007330 213 KKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREEL-----PDIV 287 (607)
Q Consensus 213 ~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~l-----p~~i 287 (607)
.+|++|+++++.. ....+...+..++++++|+|++|. ++...+..++..+..+++|++|+|++|.++.. ...+
T Consensus 2 ~~l~~ld~~~~~i-~~~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l 79 (460)
T d1z7xw1 2 LDIQSLDIQCEEL-SDARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 79 (460)
T ss_dssp EEEEEEEEESCCC-CHHHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred CCCCEEEeeCCcC-ChHHHHHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHH
Confidence 4689999998872 333355667889999999999552 33334455667778899999999999987532 2222
Q ss_pred h-cCCcccEeecCCCCCccc-----cccccccccCcccccccccccccC-----cCCCCCCCCCCccCcEEecCCccC--
Q 007330 288 C-ELFNLQTLEVEHCPRLKR-----LPQGIGKLVNLRHLIYYYSNLDYM-----PKGFERLTCLRTLTEFVVSGGKYS-- 354 (607)
Q Consensus 288 ~-~L~~L~~L~L~~~~~l~~-----lp~~i~~l~~L~~L~~~~~~l~~l-----p~~i~~l~~L~~L~~~~~~~~~~~-- 354 (607)
. ...+|++|+|++|. ++. ++..+..+++|++|+++.|.+... +..+..... .............
T Consensus 80 ~~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~ 156 (460)
T d1z7xw1 80 QTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC--RLEKLQLEYCSLSAA 156 (460)
T ss_dssp CSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC--CCCEEECTTSCCBGG
T ss_pred hcCCCCCCEEECCCCC-ccccccccccchhhccccccccccccccchhhhhhhhhhccccccc--ccccccccccccchh
Confidence 2 23579999999997 653 566678899999999988877532 111111110 0111111111110
Q ss_pred CCcccccccccccccCceEEEeccCCCCCH-----------------------------hHHHHHHhcCCCCCcceEEEe
Q 007330 355 GKACNIEGLRHLNHLGGVFRITGLGNVTDV-----------------------------DEAENAELEKKRNVVDLGLWF 405 (607)
Q Consensus 355 ~~~~~~~~l~~L~~L~~~l~i~~~~~~~~~-----------------------------~~~~~~~l~~~~~L~~L~l~~ 405 (607)
........+.....+. .+.+......... .......+.....++.+.+..
T Consensus 157 ~~~~~~~~l~~~~~~~-~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 235 (460)
T d1z7xw1 157 SCEPLASVLRAKPDFK-ELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 235 (460)
T ss_dssp GHHHHHHHHHHCTTCC-EEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS
T ss_pred hhcccccccccccccc-cccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhh
Confidence 0001111222223333 3333322110000 011111222334444444443
Q ss_pred cCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCC----CChhhhcCCCccEEEEecCCCCCc-CC----C-CCCCCC
Q 007330 406 DKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKIT----FPKWIMSLNNLKSLHLRSCEKCEI-LS----P-LGKLPS 475 (607)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~----lp~~l~~l~~L~~L~L~~~~~~~~-~~----~-l~~l~~ 475 (607)
+... .................++.+++++|..... ...++...+.++.+++++|..... +. . ....+.
T Consensus 236 n~~~--~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~ 313 (460)
T d1z7xw1 236 NKLG--DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQ 313 (460)
T ss_dssp SBCH--HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCC
T ss_pred cccc--ccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 3220 0001112233444566777888777765431 122334567788888877753210 00 0 123457
Q ss_pred CCeeEecCCcCeeeCccccCCCCCCccCCCccceeeeccccccccccccccccCccccc-ccCCccceeeeecccCccc-
Q 007330 476 LETLYIAGMSGKRVGDEFFGIGSDCNIAFPKLKFLRVVDMFEWEEWGFGITRSNVKEDV-MVMPCLNYLDIQFCFKLKA- 553 (607)
Q Consensus 476 L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~-~~~~~L~~L~l~~c~~l~~- 553 (607)
|+.+++++|.+...+...+... ....++|++|+|+++. +..-... .....+ ...+.|++|++++|. ++.
T Consensus 314 L~~l~l~~~~l~~~~~~~l~~~---~~~~~~L~~L~Ls~N~-i~~~g~~----~l~~~l~~~~~~L~~L~Ls~n~-i~~~ 384 (460)
T d1z7xw1 314 LESLWVKSCSFTAACCSHFSSV---LAQNRFLLELQISNNR-LEDAGVR----ELCQGLGQPGSVLRVLWLADCD-VSDS 384 (460)
T ss_dssp CCEEECTTSCCBGGGHHHHHHH---HHHCSSCCEEECCSSB-CHHHHHH----HHHHHHTSTTCCCCEEECTTSC-CCHH
T ss_pred cccccccccchhhhhhhhcccc---cccccchhhhheeeec-ccCcccc----hhhhhhhcccCCCCEEECCCCC-CChH
Confidence 8888888877443322211100 0245689999998873 3321100 000012 245779999999984 543
Q ss_pred ----cCCCCCCCCCcCeEEEecCc
Q 007330 554 ----LPGYLLEITALEKLEILCCP 573 (607)
Q Consensus 554 ----lp~~~~~l~~L~~L~l~~c~ 573 (607)
++..+...++|++|++++++
T Consensus 385 ~~~~l~~~l~~~~~L~~L~Ls~N~ 408 (460)
T d1z7xw1 385 SCSSLAATLLANHSLRELDLSNNC 408 (460)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHHhcCCCCCEEECCCCc
Confidence 44556667899999999885
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75 E-value=8.4e-09 Score=87.57 Aligned_cols=21 Identities=14% Similarity=0.104 Sum_probs=8.3
Q ss_pred ccccCcccccccccccccCcC
Q 007330 312 GKLVNLRHLIYYYSNLDYMPK 332 (607)
Q Consensus 312 ~~l~~L~~L~~~~~~l~~lp~ 332 (607)
..+++|++|+++.|+++.+|.
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~ 97 (156)
T d2ifga3 77 HFTPRLSRLNLSFNALESLSW 97 (156)
T ss_dssp GSCSCCCEEECCSSCCSCCCS
T ss_pred cccccccceeccCCCCcccCh
Confidence 333344444444444433333
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.74 E-value=9.8e-09 Score=87.12 Aligned_cols=107 Identities=15% Similarity=0.062 Sum_probs=85.3
Q ss_pred CCCeeEEEeeccchhhhhhhhhhhccCCceeEEEecCccccccccccccc-ccccCcccccEEecCCCCcccCch-hhhc
Q 007330 212 AKKLRSLLIHSEFEVSFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIP-KEKEKLVHLRYLKLSLLMREELPD-IVCE 289 (607)
Q Consensus 212 ~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp-~~~~~l~~L~~L~L~~~~i~~lp~-~i~~ 289 (607)
+.....+...++. .... +..+..+++|+.|++++ ++.++.++ ..|.++++|+.|++++|.+..+++ .+..
T Consensus 7 c~~~~~l~c~~~~--~~~~-p~~l~~l~~l~~L~l~~-----n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 78 (156)
T d2ifga3 7 PHGSSGLRCTRDG--ALDS-LHHLPGAENLTELYIEN-----QQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHF 78 (156)
T ss_dssp CSSSSCEECCSSC--CCTT-TTTSCSCSCCSEEECCS-----CSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGS
T ss_pred cCCCCeEEecCCC--CccC-cccccCccccCeeecCC-----CccccccCchhhccccccCcceeeccccCCcccccccc
Confidence 3344556666654 3332 33378889999999983 34588885 568999999999999999999965 4899
Q ss_pred CCcccEeecCCCCCccccccccccccCccccccccccc
Q 007330 290 LFNLQTLEVEHCPRLKRLPQGIGKLVNLRHLIYYYSNL 327 (607)
Q Consensus 290 L~~L~~L~L~~~~~l~~lp~~i~~l~~L~~L~~~~~~l 327 (607)
+++|++|+|++|. ++.+|.++....+|++|+++.|.+
T Consensus 79 l~~L~~L~Ls~N~-l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 79 TPRLSRLNLSFNA-LESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CSCCCEEECCSSC-CSCCCSTTTCSCCCCEEECCSSCC
T ss_pred cccccceeccCCC-CcccChhhhccccccccccCCCcc
Confidence 9999999999998 999998887777899999988866
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.74 E-value=5.7e-10 Score=109.22 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=31.1
Q ss_pred HHhcCCCCCcceEEEecCCCCCchhcHHHHhhcCCCCCCcceEEEeecCCCCC----CChhhhcCCCccEEEEecCC
Q 007330 390 AELEKKRNVVDLGLWFDKDEEGEEADHEEIIEALKPHSNLVALDILGFKGKIT----FPKWIMSLNNLKSLHLRSCE 462 (607)
Q Consensus 390 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~----lp~~l~~l~~L~~L~L~~~~ 462 (607)
..+...+.|+.|+++.|.... ......+...+...++|+.|++++|.+... +...+..+++|++|+|++|.
T Consensus 180 ~~l~~~~~L~~L~L~~n~i~~--~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 180 KTFQSHRLLHTVKMVQNGIRP--EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCL 254 (344)
T ss_dssp HHHHHCTTCCEEECCSSCCCH--HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCC
T ss_pred chhhhhhhhcccccccccccc--cccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCc
Confidence 334455566666665554321 000111233344455555666555543210 12223344555555555553
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.64 E-value=4.4e-09 Score=102.72 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=134.8
Q ss_pred cccccCCCCeeEEEeeccch--hhhhhhhhhhccCCceeEEEecCcccccc-----cccccccccccCcccccEEecCCC
Q 007330 206 PVSIFKAKKLRSLLIHSEFE--VSFHVLQGLFDYLTCLRALKITGKVSWGQ-----NSIYAIPKEKEKLVHLRYLKLSLL 278 (607)
Q Consensus 206 ~~~~~~~~~L~~L~l~~~~~--~~~~~~~~~~~~l~~L~~L~L~~~~~~~~-----~~l~~lp~~~~~l~~L~~L~L~~~ 278 (607)
...+.....++.|++++|.. .....+...+...+.|+.|+++++..-.. ..+..+...+...++|+.|++++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 44556678888888887751 11223445567778888888874321000 011223344556778888888887
Q ss_pred Cccc-----CchhhhcCCcccEeecCCCCCcccc-cccc-------------ccccCcccccccccccccCcCCCCCCCC
Q 007330 279 MREE-----LPDIVCELFNLQTLEVEHCPRLKRL-PQGI-------------GKLVNLRHLIYYYSNLDYMPKGFERLTC 339 (607)
Q Consensus 279 ~i~~-----lp~~i~~L~~L~~L~L~~~~~l~~l-p~~i-------------~~l~~L~~L~~~~~~l~~lp~~i~~l~~ 339 (607)
.+.. +...+..+++|++|++++|. +..- ...+ ...+.|+.|+++.+.+..- +
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~--~------ 174 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG--S------ 174 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG--G------
T ss_pred ccccccccchhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccceeeccccccccc--c------
Confidence 7544 34445667888888888775 3210 0001 1233444444443332110 0
Q ss_pred CCccCcEEecCCccCCCcccccccccccccCceEEEeccCCCCC--HhHHHHHHhcCCCCCcceEEEecCCCCCchhcHH
Q 007330 340 LRTLTEFVVSGGKYSGKACNIEGLRHLNHLGGVFRITGLGNVTD--VDEAENAELEKKRNVVDLGLWFDKDEEGEEADHE 417 (607)
Q Consensus 340 L~~L~~~~~~~~~~~~~~~~~~~l~~L~~L~~~l~i~~~~~~~~--~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~ 417 (607)
.......++....++ .+.+..+. +.. ........+..+++|+.|++++|.... ....
T Consensus 175 ----------------~~~l~~~l~~~~~L~-~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~---~g~~ 233 (344)
T d2ca6a1 175 ----------------MKEWAKTFQSHRLLH-TVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH---LGSS 233 (344)
T ss_dssp ----------------HHHHHHHHHHCTTCC-EEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH---HHHH
T ss_pred ----------------cccccchhhhhhhhc-cccccccc-ccccccccchhhhhcchhhhcccccccccccc---cccc
Confidence 000000111112222 34333321 111 111223346678889999988776421 1123
Q ss_pred HHhhcCCCCCCcceEEEeecCCCCCCChhh----h--cCCCccEEEEecCCCCC-c----CCCC-CCCCCCCeeEecCCc
Q 007330 418 EIIEALKPHSNLVALDILGFKGKITFPKWI----M--SLNNLKSLHLRSCEKCE-I----LSPL-GKLPSLETLYIAGMS 485 (607)
Q Consensus 418 ~~~~~l~~~~~L~~L~l~~~~~~~~lp~~l----~--~l~~L~~L~L~~~~~~~-~----~~~l-~~l~~L~~L~L~~~~ 485 (607)
.+...+...++|++|++++|.+...-...+ . ..+.|++|++++|.... . ...+ ..+++|++|+|++|.
T Consensus 234 ~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 234 ALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp HHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred cccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 455667778899999999887654211112 2 24679999999986322 1 1112 257789999999987
Q ss_pred Ce
Q 007330 486 GK 487 (607)
Q Consensus 486 ~~ 487 (607)
+.
T Consensus 314 ~~ 315 (344)
T d2ca6a1 314 FS 315 (344)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=6.3e-07 Score=76.19 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=50.8
Q ss_pred hhhhhccCCceeEEEecCccccccccccccc---ccccCcccccEEecCCCCcccCchh-hhcCCcccEeecCCCCCccc
Q 007330 231 LQGLFDYLTCLRALKITGKVSWGQNSIYAIP---KEKEKLVHLRYLKLSLLMREELPDI-VCELFNLQTLEVEHCPRLKR 306 (607)
Q Consensus 231 ~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp---~~~~~l~~L~~L~L~~~~i~~lp~~-i~~L~~L~~L~L~~~~~l~~ 306 (607)
+...+..++.|++|+|+ +|.++.++ ..+..+++|++|++++|.++++++- ..+..+|+.|++++|+ +..
T Consensus 57 l~~~~~~~~~L~~L~Ls------~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Np-l~~ 129 (162)
T d1koha1 57 LRIIEENIPELLSLNLS------NNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS-LSD 129 (162)
T ss_dssp HHHHHHHCTTCCCCCCC------SSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTST-TSS
T ss_pred hHHHHHhCCCCCEeeCC------CccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCC-cCc
Confidence 44445667777777777 66666553 3355677777777777777777652 2234467777777776 332
Q ss_pred cc--------cccccccCccccc
Q 007330 307 LP--------QGIGKLVNLRHLI 321 (607)
Q Consensus 307 lp--------~~i~~l~~L~~L~ 321 (607)
.. ..+..+++|+.||
T Consensus 130 ~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 130 TFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSSSHHHHHHHHHTTSTTCCEET
T ss_pred CcccchhHHHHHHHHCCCCCEEC
Confidence 21 1134566666665
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=1.5e-06 Score=73.70 Aligned_cols=91 Identities=23% Similarity=0.106 Sum_probs=67.1
Q ss_pred cccccccccCcccccEEecCCCCcccCc---hhhhcCCcccEeecCCCCCcccccc-ccccccCcccccccccccccCcC
Q 007330 257 IYAIPKEKEKLVHLRYLKLSLLMREELP---DIVCELFNLQTLEVEHCPRLKRLPQ-GIGKLVNLRHLIYYYSNLDYMPK 332 (607)
Q Consensus 257 l~~lp~~~~~l~~L~~L~L~~~~i~~lp---~~i~~L~~L~~L~L~~~~~l~~lp~-~i~~l~~L~~L~~~~~~l~~lp~ 332 (607)
...++.....+++|++|+|++|.++.++ ..+..+++|++|+|++|. ++++++ ...+..+|+.|++.+|.+.....
T Consensus 54 ~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 54 AATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp HHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred hhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcc
Confidence 3334434457899999999999988774 446789999999999998 888875 22345578999999998865432
Q ss_pred C--------CCCCCCCCccCcEEe
Q 007330 333 G--------FERLTCLRTLTEFVV 348 (607)
Q Consensus 333 ~--------i~~l~~L~~L~~~~~ 348 (607)
. +..+++|+.|+...+
T Consensus 133 ~~~~y~~~i~~~~P~L~~LDg~~v 156 (162)
T d1koha1 133 DQSTYISAIRERFPKLLRLDGHEL 156 (162)
T ss_dssp SHHHHHHHHHTTSTTCCEETTEEC
T ss_pred cchhHHHHHHHHCCCCCEECcCCC
Confidence 1 456888888875443
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.15 E-value=0.00013 Score=61.60 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=31.2
Q ss_pred hccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcc-----cCchhhhcCCcccEeecCCCC
Q 007330 235 FDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMRE-----ELPDIVCELFNLQTLEVEHCP 302 (607)
Q Consensus 235 ~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~-----~lp~~i~~L~~L~~L~L~~~~ 302 (607)
..+.+.|+.|+|+++..++...+..+-..+...++|++|+|++|.+. .+...+...+.|++|+|++|.
T Consensus 11 ~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~ 83 (167)
T d1pgva_ 11 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF 83 (167)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB
T ss_pred HhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh
Confidence 33445555555553222222223333334444455555555555532 122233445555666665554
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.01 E-value=0.00023 Score=60.13 Aligned_cols=111 Identities=11% Similarity=0.025 Sum_probs=64.2
Q ss_pred CCCCeeEEEeeccchhh---hhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCccc-----
Q 007330 211 KAKKLRSLLIHSEFEVS---FHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREE----- 282 (607)
Q Consensus 211 ~~~~L~~L~l~~~~~~~---~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~----- 282 (607)
+.+.|+.|+++++.... ...+...+...+.|++|++++|. ++......+...+...+.|+.|+|++|.+..
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~-l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTA-ISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSC-CBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccc-cchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45778888887643111 12234446677788888888431 2222233444555566778888888887643
Q ss_pred CchhhhcCCcccEeecCCCCCccc--------cccccccccCccccccc
Q 007330 283 LPDIVCELFNLQTLEVEHCPRLKR--------LPQGIGKLVNLRHLIYY 323 (607)
Q Consensus 283 lp~~i~~L~~L~~L~L~~~~~l~~--------lp~~i~~l~~L~~L~~~ 323 (607)
+-..+...+.|++|++++|. +.. +...+..-++|+.|+++
T Consensus 92 l~~aL~~n~sL~~L~l~~n~-~~~~g~~~~~~l~~~L~~n~sL~~l~l~ 139 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQR-QSVLGNQVEMDMMMAIEENESLLRVGIS 139 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCS-SCCCCHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHhCCcCCEEECCCCc-CCCccHHHHHHHHHHHHhCCCccEeeCc
Confidence 23345666778888887764 222 23334445566666543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.53 E-value=0.00073 Score=56.81 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=26.7
Q ss_pred hccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCcc-----cCchhhhcCCcccEeec
Q 007330 235 FDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMRE-----ELPDIVCELFNLQTLEV 298 (607)
Q Consensus 235 ~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~-----~lp~~i~~L~~L~~L~L 298 (607)
+...++|++|++++| .++......+...+...+.++.++++++.+. .+...+...++|+.++|
T Consensus 42 l~~n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L 109 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRI 109 (166)
T ss_dssp HTTCCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEEC
T ss_pred HhcCCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEee
Confidence 344555555555532 1111112223333344455555555555432 12233444555554444
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.20 E-value=0.0014 Score=55.02 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=65.6
Q ss_pred hhhhhhhhhccCCceeEEEecCcccccccccccccccccCcccccEEecCCCCccc-----CchhhhcCCcccEeecCCC
Q 007330 227 SFHVLQGLFDYLTCLRALKITGKVSWGQNSIYAIPKEKEKLVHLRYLKLSLLMREE-----LPDIVCELFNLQTLEVEHC 301 (607)
Q Consensus 227 ~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~l~~lp~~~~~l~~L~~L~L~~~~i~~-----lp~~i~~L~~L~~L~L~~~ 301 (607)
+.+.+.....+.+.|+.|+++++..++...+..+-..+...++|+.|++++|.+.. +-..+...+.++.+++++|
T Consensus 5 i~~~l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~ 84 (166)
T d1io0a_ 5 VEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN 84 (166)
T ss_dssp HHHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccc
Confidence 44556666678899999999965555555555566667788999999999998643 3344667889999999988
Q ss_pred CCcc-----ccccccccccCccccc
Q 007330 302 PRLK-----RLPQGIGKLVNLRHLI 321 (607)
Q Consensus 302 ~~l~-----~lp~~i~~l~~L~~L~ 321 (607)
. +. .+-..+...++|+.++
T Consensus 85 ~-~~~~g~~~l~~~l~~~~~L~~l~ 108 (166)
T d1io0a_ 85 F-ISGSGILALVEALQSNTSLIELR 108 (166)
T ss_dssp C-CCHHHHHHHHHGGGGCSSCCEEE
T ss_pred c-ccchhHHHHHHHHHhCccccEEe
Confidence 7 33 2334455666666654
Done!