Query 007332
Match_columns 607
No_of_seqs 57 out of 59
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 23:07:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007332.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007332hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qr0a1 d.150.1.1 (A:1-101) 4' 39.5 26 0.0019 27.2 5.8 40 104-143 15-58 (101)
2 d1bdga2 c.55.1.3 (A:223-460) H 26.2 34 0.0025 30.6 5.0 47 98-144 128-180 (237)
3 d2idob1 a.237.1.1 (B:2-76) Hom 22.6 28 0.002 27.5 3.1 22 109-134 5-26 (75)
4 d3besl1 a.26.1.3 (L:0-126) Int 21.0 51 0.0037 28.1 4.7 74 49-123 25-109 (127)
5 d2ae9a1 a.237.1.1 (A:1-76) The 18.9 27 0.002 27.7 2.3 22 109-134 5-26 (76)
6 d2cchb2 a.74.1.1 (B:309-432) C 13.2 46 0.0033 26.8 2.3 16 129-144 48-63 (124)
7 d2f9wa2 c.55.1.13 (A:1-114) Ty 11.9 48 0.0035 25.2 2.0 12 126-137 100-111 (114)
8 d2gc6a2 c.72.2.2 (A:1-296) Fol 11.8 55 0.004 29.0 2.7 18 126-143 262-279 (296)
9 d1y9ba1 a.43.1.9 (A:3-83) Hypo 10.8 1E+02 0.0074 23.5 3.6 35 110-144 8-50 (81)
10 d1zbdb_ g.50.1.1 (B:) Effector 9.1 1.2E+02 0.0089 24.1 3.7 27 112-140 3-29 (124)
No 1
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=39.46 E-value=26 Score=27.21 Aligned_cols=40 Identities=20% Similarity=0.379 Sum_probs=25.8
Q ss_pred HHHHHhhc-CChHHHhhhhHH-HHHHHHH--HHHHHHHHHHhhc
Q 007332 104 EEFSKILD-VSKEERDRIQRL-QVIDRAA--AAIAAARAILEEK 143 (607)
Q Consensus 104 ~~f~~~l~-v~~eerdrvqr~-qvidraa--aaiaaara~l~~~ 143 (607)
.+++++|. +|.+||.|++|+ ..-||.. ++-+..|.+|...
T Consensus 15 ~~~~~~~~~Ls~~e~~r~~r~~~~~dr~~~l~~r~llr~~l~~~ 58 (101)
T d1qr0a1 15 EENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ 58 (101)
T ss_dssp HHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35566665 899999999994 4555443 3444556666544
No 2
>d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}
Probab=26.19 E-value=34 Score=30.62 Aligned_cols=47 Identities=26% Similarity=0.198 Sum_probs=31.0
Q ss_pred HHHHhHHHHHHhhc---CChHHHhhhhHH--HHHHHHHHHHHHHHH-HHhhcC
Q 007332 98 QLEKKSEEFSKILD---VSKEERDRIQRL--QVIDRAAAAIAAARA-ILEEKN 144 (607)
Q Consensus 98 ~~~~k~~~f~~~l~---v~~eerdrvqr~--qvidraaaaiaaara-~l~~~~ 144 (607)
++.....-|++.|. ++.+++.-||++ -|+.|||.=+||+-| ||+...
T Consensus 128 ~~~~~~~~l~~~~~~~~~~~~d~~~lr~i~~~V~~RaA~L~Aa~iaai~~~~~ 180 (237)
T d1bdga2 128 LLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRIN 180 (237)
T ss_dssp CCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 34445556666665 467889889888 789999866555543 454443
No 3
>d2idob1 a.237.1.1 (B:2-76) Homolog of theta (HOT) {Bacteriophage P1 [TaxId: 10678]}
Probab=22.62 E-value=28 Score=27.54 Aligned_cols=22 Identities=45% Similarity=0.684 Sum_probs=19.0
Q ss_pred hhcCChHHHhhhhHHHHHHHHHHHHH
Q 007332 109 ILDVSKEERDRIQRLQVIDRAAAAIA 134 (607)
Q Consensus 109 ~l~v~~eerdrvqr~qvidraaaaia 134 (607)
|-.+|+||+|.|- ||-||+++|
T Consensus 5 la~l~kee~dKvn----VDLaAsgVa 26 (75)
T d2idob1 5 IAAKSQEERDKVN----VDLAASGVA 26 (75)
T ss_dssp GGGSCHHHHHHHH----HHHHHHHHH
T ss_pred HhhcCHHHHHHHh----HHHHHhHhH
Confidence 5678999999985 899998887
No 4
>d3besl1 a.26.1.3 (L:0-126) Interferon-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.96 E-value=51 Score=28.11 Aligned_cols=74 Identities=19% Similarity=0.306 Sum_probs=41.0
Q ss_pred CCCCchHHHHHHHHhh-hhhhHHHHHHhhcccccCCCCCCCCCCCC--CchHHH--------HHhHHHHHHhhcCChHHH
Q 007332 49 EGGGSYLDMWQKAVDR-DRKEIEFQKIAGSLAESGDVDGNEGGGGR--DLTEQL--------EKKSEEFSKILDVSKEER 117 (607)
Q Consensus 49 ~g~~syldmwk~av~r-er~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~k~~~f~~~l~v~~eer 117 (607)
+||+=+|++||+.-++ |+|-+.=|=|---|.--.|..++..---+ .-.++| .+|-.+|++|..++.-..
T Consensus 25 dggplFl~iLknw~EesekkIi~SQIVs~Y~klFen~k~nq~iq~si~~Ike~l~~~f~~~~~~K~~df~~L~ki~vnD~ 104 (127)
T d3besl1 25 DNGTLFLGILKNWKEESDRKIMQSQIVSFYFKLFKNFKDDQSIQKSVETIKEDMNVKFFNSNKKKRDDFEKLTNYSVTDL 104 (127)
T ss_dssp CSSCSSHHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTTTCSTTHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHCCTTCH
T ss_pred cCCccHHHHHHhHHhhcccchHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHhccCCCH
Confidence 8899999999999988 66655444111111111123333210000 001233 467889999988876543
Q ss_pred hhhhHH
Q 007332 118 DRIQRL 123 (607)
Q Consensus 118 drvqr~ 123 (607)
+|||-
T Consensus 105 -~VQrK 109 (127)
T d3besl1 105 -NVQRK 109 (127)
T ss_dssp -HHHHH
T ss_pred -HHHHH
Confidence 67774
No 5
>d2ae9a1 a.237.1.1 (A:1-76) Theta subunit of DNA polymerase III {Escherichia coli [TaxId: 562]}
Probab=18.93 E-value=27 Score=27.69 Aligned_cols=22 Identities=32% Similarity=0.572 Sum_probs=18.9
Q ss_pred hhcCChHHHhhhhHHHHHHHHHHHHH
Q 007332 109 ILDVSKEERDRIQRLQVIDRAAAAIA 134 (607)
Q Consensus 109 ~l~v~~eerdrvqr~qvidraaaaia 134 (607)
|-.+|+||+|.|. ||-||+++|
T Consensus 5 la~l~kee~dKvn----VDLaAsgVa 26 (76)
T d2ae9a1 5 LAKLDQTEMDKVN----VDLAAAGVA 26 (76)
T ss_dssp CCCSSTHHHHHHH----HHHHHHHHH
T ss_pred hhhcCHHHHHHHh----HHHHHhHhH
Confidence 5678999999985 899998887
No 6
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=13.16 E-value=46 Score=26.76 Aligned_cols=16 Identities=25% Similarity=0.156 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHhhcC
Q 007332 129 AAAAIAAARAILEEKN 144 (607)
Q Consensus 129 aaaaiaaara~l~~~~ 144 (607)
|||||..||-+|...+
T Consensus 48 Aaaai~lar~~l~~~~ 63 (124)
T d2cchb2 48 AGAAFHLALYTVTGQS 63 (124)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999998654
No 7
>d2f9wa2 c.55.1.13 (A:1-114) Type III pantothenate kinase, CoaX {Pseudomonas aeruginosa [TaxId: 287]}
Probab=11.93 E-value=48 Score=25.17 Aligned_cols=12 Identities=42% Similarity=0.454 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHH
Q 007332 126 IDRAAAAIAAAR 137 (607)
Q Consensus 126 idraaaaiaaar 137 (607)
+||-+|||||.+
T Consensus 100 ~DR~~~~vaA~~ 111 (114)
T d2f9wa2 100 LDRWLALVAAHH 111 (114)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 799998887754
No 8
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=11.81 E-value=55 Score=28.96 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 007332 126 IDRAAAAIAAARAILEEK 143 (607)
Q Consensus 126 idraaaaiaaara~l~~~ 143 (607)
|.-|++|||+|++|++..
T Consensus 262 ~~Na~~Aia~~~~l~~~~ 279 (296)
T d2gc6a2 262 QRNMAIAIQTAKVYAKQT 279 (296)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 578999999999998764
No 9
>d1y9ba1 a.43.1.9 (A:3-83) Hypothetical protein VCA0482 (VCA0319) {Vibrio cholerae [TaxId: 666]}
Probab=10.85 E-value=1e+02 Score=23.54 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=23.6
Q ss_pred hcCChHHHhhhhHHHHH-H-H------HHHHHHHHHHHHhhcC
Q 007332 110 LDVSKEERDRIQRLQVI-D-R------AAAAIAAARAILEEKN 144 (607)
Q Consensus 110 l~v~~eerdrvqr~qvi-d-r------aaaaiaaara~l~~~~ 144 (607)
|+|+.|.++.|+|--=+ . + ..+|+.+|+.+|.+..
T Consensus 8 ~Rv~~e~k~li~rAA~l~G~~tls~Fv~~aa~~~A~~vi~~~~ 50 (81)
T d1y9ba1 8 ARVDVDTQDLLAKAAALAGMSSINSFVLNAAIEKAKQVIEREQ 50 (81)
T ss_dssp EECCHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhH
Confidence 68899999877764322 2 1 3567778888887653
No 10
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.07 E-value=1.2e+02 Score=24.10 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=17.9
Q ss_pred CChHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 007332 112 VSKEERDRIQRLQVIDRAAAAIAAARAIL 140 (607)
Q Consensus 112 v~~eerdrvqr~qvidraaaaiaaara~l 140 (607)
++.|||+.| ++||.|+...-+.=+-.|
T Consensus 3 LT~eE~~~i--~~VL~r~~~l~~~E~~rl 29 (124)
T d1zbdb_ 3 LTDEEKEII--NRVIARAEKMETMEQERI 29 (124)
T ss_dssp CCSSHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 577888888 688888865544433333
Done!