BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007334
(607 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129530|ref|XP_002328739.1| predicted protein [Populus trichocarpa]
gi|222839037|gb|EEE77388.1| predicted protein [Populus trichocarpa]
Length = 560
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/559 (73%), Positives = 460/559 (82%), Gaps = 24/559 (4%)
Query: 68 LPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIG 127
+PE+ G V + LE + G D KVK +YEKP+DFTKID NLLPTV+I+G
Sbjct: 1 MPELVSGSGEDVTSSDLEQLDFCSDDGGT--DKKVKVVYEKPIDFTKIDTNLLPTVIIVG 58
Query: 128 RPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSG 187
RPNVGKSAL+NRLIRRREALVYNTPDDHVTRDIREG+AKLGDLRFKVLDSAGLETEA SG
Sbjct: 59 RPNVGKSALYNRLIRRREALVYNTPDDHVTRDIREGIAKLGDLRFKVLDSAGLETEAASG 118
Query: 188 SILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 247
SIL RT MTANVLA+TQFA+F+IDVR+GLHPLDL+VGKW RKHAP IKPIVAMNK ESL
Sbjct: 119 SILQRTTSMTANVLARTQFAVFLIDVRAGLHPLDLDVGKWFRKHAPGIKPIVAMNKSESL 178
Query: 248 HNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNN 307
+G GS++ AA E+ MLGFGDPIAISAETGLGM L++AL+P +EDYML+VLN++C Q+N
Sbjct: 179 CDGVGSISDAADEARMLGFGDPIAISAETGLGMAALHDALQPLIEDYMLQVLNNNCDQDN 238
Query: 308 S---STQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR 364
S D + E DESKLPLQLAI+GRPNVGKSTLLN LLQE+RVLVGPE GLTRDSVR
Sbjct: 239 GYGPSHVDDVAGEVDESKLPLQLAIIGRPNVGKSTLLNTLLQEERVLVGPEVGLTRDSVR 298
Query: 365 VHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----- 418
F+Y+GRT+YLVDTAGWLQR EKGP+SLSVMQSRKNLMRA VVALVLDAEEV
Sbjct: 299 TQFQYEGRTIYLVDTAGWLQRTGLEKGPSSLSVMQSRKNLMRAQVVALVLDAEEVVKARR 358
Query: 419 -----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
RAVEEGRGLVVIVNKMDLL G++NS L+ +V EAVP EIQTVIPQ+TGI
Sbjct: 359 SMTHAEVVIARRAVEEGRGLVVIVNKMDLLKGKRNSTLFDKVMEAVPLEIQTVIPQITGI 418
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKY 527
PVVFTSALEGRGRIAVM QVIDTY+KWC RL TSRLNRWLRKVM RHSWKDQ+AQPKIKY
Sbjct: 419 PVVFTSALEGRGRIAVMRQVIDTYEKWCSRLSTSRLNRWLRKVMSRHSWKDQAAQPKIKY 478
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
FTQVKARPPTFVAF SGK LS+ +LRFLTKSLKEDFDLGGIPIRI QRSVPRK G + S
Sbjct: 479 FTQVKARPPTFVAFTSGKTQLSETDLRFLTKSLKEDFDLGGIPIRIMQRSVPRKGGGNRS 538
Query: 588 RQ--NTGQKVGRTFSDKRT 604
+ + G+ R SDKRT
Sbjct: 539 KSTPSAGRMAERFLSDKRT 557
>gi|255556681|ref|XP_002519374.1| GTP-binding protein enga, putative [Ricinus communis]
gi|223541441|gb|EEF42991.1| GTP-binding protein enga, putative [Ricinus communis]
Length = 635
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/636 (66%), Positives = 490/636 (77%), Gaps = 34/636 (5%)
Query: 1 MFHSWVRAVLARKSSLGFGLFGRSISS---STNPVNLCKPFNFTLNNYSHIRASAAGSLY 57
M HSWVR++L RK G + +S ++ ST N F F+ + RAS
Sbjct: 1 MSHSWVRSLLVRKRHYGSSILYKSTTAYSLSTEVNNFIPTFKFS-SGLLFNRASFMNDNR 59
Query: 58 QVGSSLK-CNLLP--EVPRGFCGVVQNEALE---DTHVEPEPDGVVEDHKVKPLYEKPVD 111
V + + C L ++ R FC + +NE E D + E D VV++ KV EK +D
Sbjct: 60 VVYTGWRFCQLRERWQLSRAFCSIHKNEMSELDSDDIICSELDSVVKEEKVSD--EKLID 117
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
FTKID NLLPTV+IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR
Sbjct: 118 FTKIDSNLLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 177
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
F+VLDSAGLETEATSGSIL RT MTANVLA+TQFAIF+IDVR+GLHPLD+EVGKWLRKH
Sbjct: 178 FRVLDSAGLETEATSGSILQRTTSMTANVLARTQFAIFLIDVRAGLHPLDVEVGKWLRKH 237
Query: 232 APQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
AP I PIVAMNK ESL +G GS+ AA E+ MLGFGDPIAISAETGLGMT LY++L P +
Sbjct: 238 APGINPIVAMNKSESLCDGAGSIEEAADEARMLGFGDPIAISAETGLGMTTLYDSLGPLL 297
Query: 292 EDYMLRVLNDSCTQ---NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
DY L VL ++C Q N+++ D +S +++SKLP+QLAIVGRPNVGKSTLLN LLQE+
Sbjct: 298 VDYALNVLKNNCNQHSSNDATHYDSSSEVEEDSKLPMQLAIVGRPNVGKSTLLNTLLQEE 357
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQRE-KEKGPASLSVMQSRKNLMRAH 407
RVLVGPE GLTRDS+R F++QGRT+YLVDTAGWL R +EKGP+SLS++QSRKNLMRAH
Sbjct: 358 RVLVGPEVGLTRDSIRSQFDFQGRTIYLVDTAGWLHRTGQEKGPSSLSIVQSRKNLMRAH 417
Query: 408 VVALVLDAEEV----------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKE 451
VVALVLDA E+ RAVEEGRGLVVIVNKMDLL G+QNS L+++V E
Sbjct: 418 VVALVLDAAEIAKARRSMTHAEVVIARRAVEEGRGLVVIVNKMDLLQGKQNSKLFEKVME 477
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
AVP EIQTVIPQV+GIPVVF SALEGRGR AV+ QVI TY+KWC RLPT+RLNRWL KVM
Sbjct: 478 AVPLEIQTVIPQVSGIPVVFISALEGRGRTAVLRQVIGTYEKWCSRLPTARLNRWLHKVM 537
Query: 512 GRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
RHSWKDQ+AQPKIKYFTQVKARPPTFVAF SGK LSD +LRFLTKSLKEDF+LGGIPI
Sbjct: 538 SRHSWKDQAAQPKIKYFTQVKARPPTFVAFTSGKTRLSDTDLRFLTKSLKEDFNLGGIPI 597
Query: 572 RITQRSVPRKCG--SSSSRQNTGQKVGRTFSDKRTV 605
RI QRSVP+K S S Q+TG+ R SDKR V
Sbjct: 598 RIMQRSVPKKSAGRGSKSGQSTGRMAERMLSDKRIV 633
>gi|334188086|ref|NP_198812.3| GTP-binding protein [Arabidopsis thaliana]
gi|332007113|gb|AED94496.1| GTP-binding protein [Arabidopsis thaliana]
Length = 621
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/638 (63%), Positives = 480/638 (75%), Gaps = 52/638 (8%)
Query: 1 MFHSWVRAVLARKSSLGFGLFGRSISS----------STNPVNLCK-PFNFTLNNYSHIR 49
M S VRA+ ARK+ + R + S ++N N FN T+ + SH
Sbjct: 1 MSQSLVRAISARKNQFSLVFYYRCLYSKLLHSQDQIIASNCSNFSSLGFNSTVRHRSHQN 60
Query: 50 ASAAGSLYQVGSSLKCNL-LPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEK 108
+ S+L +L L GF V +++ + D K K Y+K
Sbjct: 61 --------RFCSNLISDLNLVRSTNGFATVSDESNVDNGEK-------LVDKKPKIFYKK 105
Query: 109 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 168
P+DFTKID NLLPTVM++GRPNVGKSAL+NRLIRRREALVYNTPDDHVTRDIREG+AKLG
Sbjct: 106 PIDFTKIDANLLPTVMLMGRPNVGKSALYNRLIRRREALVYNTPDDHVTRDIREGIAKLG 165
Query: 169 DLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWL 228
DLRF VLDSAG+ETE +SG+IL RT MTANVLA+TQFA+ +IDVR+GLHPLDLEVGKWL
Sbjct: 166 DLRFNVLDSAGIETEVSSGTILGRTTAMTANVLARTQFAVLIIDVRAGLHPLDLEVGKWL 225
Query: 229 RKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR 288
RKHAPQIKPIV MNK ES+ GSL A+E+L LGFG+PIAISAETGLGMT LYE LR
Sbjct: 226 RKHAPQIKPIVVMNKSESI----GSLDEVASEALALGFGEPIAISAETGLGMTTLYEVLR 281
Query: 289 PSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
P +EDY + +LND +Q++ T + S E DESKLPLQLAIVG+PNVGKSTLLNALL+E+
Sbjct: 282 PLLEDYTVEMLNDIGSQDDVLTDENLSDEIDESKLPLQLAIVGKPNVGKSTLLNALLEEE 341
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAH 407
RVLVGPEAGLTRD+VRV FE+QGRTVYLVDTAGWL+R E++KGPASLS+MQSRK+LMRAH
Sbjct: 342 RVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAGWLERTERDKGPASLSIMQSRKSLMRAH 401
Query: 408 VVALVLDAEEV----------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKE 451
V+ALVLDAEE+ RAVEEGRGLVVIVNKMD L GR+NS +YK++KE
Sbjct: 402 VIALVLDAEEIIKAKCSMTHSEVVIARRAVEEGRGLVVIVNKMDRLRGRENSEMYKKIKE 461
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
AVP EIQTVIPQ+TGIPVVF SALEGRGR+ VM +V DTY++WC RL T RLNRWLRKVM
Sbjct: 462 AVPIEIQTVIPQITGIPVVFISALEGRGRMEVMKEVTDTYKRWCSRLSTGRLNRWLRKVM 521
Query: 512 GRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
RHSWKD ++QPKIK+FTQVKARPPTFVAF+SGK L ++++RFLT+SLKEDFDLGG PI
Sbjct: 522 SRHSWKDTASQPKIKFFTQVKARPPTFVAFVSGKTQLLESDIRFLTRSLKEDFDLGGTPI 581
Query: 572 RITQRSVPR----KCGSSSSRQNTGQKVGRTFSDKRTV 605
RI QR +PR G S ++ + V RT SDKRT+
Sbjct: 582 RIIQRVIPRAPPSGTGGGGSGNSSSRVVQRTTSDKRTL 619
>gi|356520141|ref|XP_003528723.1| PREDICTED: GTPase Der-like [Glycine max]
Length = 552
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/539 (70%), Positives = 440/539 (81%), Gaps = 33/539 (6%)
Query: 100 HKVKPLYEK----------PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVY 149
H + P+ E+ P+DFT+I I+ LPTV+I+GRPNVGKSALFNRLIRRREALVY
Sbjct: 11 HLIPPVTERGFSSLSVVTAPLDFTEIQISRLPTVVILGRPNVGKSALFNRLIRRREALVY 70
Query: 150 NTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIF 209
NTPDDHVTRDIREGLAKL DLRF+VLDSAGLE EATS SIL RTA +TA+VLAK+ FA+F
Sbjct: 71 NTPDDHVTRDIREGLAKLADLRFRVLDSAGLEAEATSASILHRTASITAHVLAKSHFALF 130
Query: 210 MIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDP 269
+ D R+GLHPLDL+VGKWLRKHAPQIKPIVAMNK ESL + TGSLA AA E LGFGDP
Sbjct: 131 LTDARAGLHPLDLQVGKWLRKHAPQIKPIVAMNKSESLFDATGSLASAANEMCRLGFGDP 190
Query: 270 IAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNS--STQDVTSPEDDESKLPLQL 327
IAISAETGLGM +LY +L+P +EDYMLRV + + NS +D + + D+SKLPLQL
Sbjct: 191 IAISAETGLGMHDLYMSLKPLLEDYMLRVFTEEGARENSHNEVEDSSDLDVDKSKLPLQL 250
Query: 328 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK 387
AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS+R FE+QGRT+YLVDTAGWLQR K
Sbjct: 251 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSIRTQFEFQGRTIYLVDTAGWLQRTK 310
Query: 388 -EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------------RAVEEGRGLVVI 430
EKG ASLS+MQSRK+L+RAH++ALVLDAEE+ RAVEEGRGLVVI
Sbjct: 311 QEKGAASLSIMQSRKSLLRAHIIALVLDAEEIINARRSMKHAEVVIARRAVEEGRGLVVI 370
Query: 431 VNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDT 490
VNKMDLL G+ S+ Y++V E VPQEIQT+IPQVTGIPVVF SALEGRGR V++QVIDT
Sbjct: 371 VNKMDLLRGKHKSSSYEKVMEVVPQEIQTIIPQVTGIPVVFISALEGRGRTTVLNQVIDT 430
Query: 491 YQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSD 550
Y+KWC RLPT+RLNRWL+KVM RHSWKDQ+AQPK+KYFTQVKARPPTFVAF+ GK LSD
Sbjct: 431 YEKWCSRLPTARLNRWLQKVMSRHSWKDQAAQPKVKYFTQVKARPPTFVAFVRGKTQLSD 490
Query: 551 AELRFLTKSLKEDFDLGGIPIRITQRSVPRK----CGSSSSRQNTGQKVGRTFSDKRTV 605
++RFLTKSLKEDFDLGGIPIRI QRSV +K G+S + + + V RT SDKR++
Sbjct: 491 TDIRFLTKSLKEDFDLGGIPIRIMQRSVTKKDASGSGNSKNSHSVCRVVERTVSDKRSI 549
>gi|359490241|ref|XP_002268933.2| PREDICTED: GTPase Der-like [Vitis vinifera]
Length = 742
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/544 (72%), Positives = 452/544 (83%), Gaps = 26/544 (4%)
Query: 82 EALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLI 141
+ LED++V + + ++K + V+FTK+D+NLLPTV+++GRPNVGKSALFNRLI
Sbjct: 104 DNLEDSNVGFDDVAPTDGPQIKDGNKNLVEFTKVDVNLLPTVILVGRPNVGKSALFNRLI 163
Query: 142 RRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVL 201
RRREALVYNTPDDHVTRD REG+AKLGDLRF+VLDSAGLE ATSGSIL RTA MTANVL
Sbjct: 164 RRREALVYNTPDDHVTRDFREGIAKLGDLRFRVLDSAGLEMAATSGSILGRTADMTANVL 223
Query: 202 AKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAES 261
A++QFAIF+IDVR+GLHP+DLEVGKWLR+HAP I I+ MNK ESL +G G LA AA E+
Sbjct: 224 ARSQFAIFLIDVRAGLHPMDLEVGKWLRRHAPGICTILVMNKSESLDDGAGLLAAAAGEA 283
Query: 262 LMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDES 321
LGFGDPIAISAETGLGM ELYE+LRP +ED+ML+VL+D +Q NSS DV +ES
Sbjct: 284 YELGFGDPIAISAETGLGMAELYESLRPLLEDHMLQVLDDKGSQENSSC-DV-----EES 337
Query: 322 KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
K PLQLAIVGRPNVGKSTLLN LLQE+RVLVGPEAGLTRDSVR F++QGRTVYLVDTAG
Sbjct: 338 KSPLQLAIVGRPNVGKSTLLNTLLQENRVLVGPEAGLTRDSVRAQFQFQGRTVYLVDTAG 397
Query: 382 WLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------------RAVEEG 424
WLQR K EKGPASLSVMQSRK++MRAHVVALVLDAEE+ RAVEEG
Sbjct: 398 WLQRTKQEKGPASLSVMQSRKSIMRAHVVALVLDAEEIANARSSMKHAEVVIARRAVEEG 457
Query: 425 RGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVM 484
RGLVVIVNKMDLL GR+NS LY++V EAVP+EIQ VIPQVTGIPVVF SALEGRGRI+VM
Sbjct: 458 RGLVVIVNKMDLLKGRKNSKLYEKVMEAVPEEIQMVIPQVTGIPVVFISALEGRGRISVM 517
Query: 485 HQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSG 544
QVIDTY+KWCLRL T+RLNRWLRKVM RHSWKDQ+AQPKIKYFTQVKARPPTFVAF+ G
Sbjct: 518 RQVIDTYEKWCLRLSTARLNRWLRKVMSRHSWKDQAAQPKIKYFTQVKARPPTFVAFMGG 577
Query: 545 KKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK---CGSSSSRQNTGQKVGRTFSD 601
K LS+ +LRFLTKSLKEDFDLGGIPIRI QRS+P+K G++ S + G+ R SD
Sbjct: 578 KTQLSNTDLRFLTKSLKEDFDLGGIPIRIMQRSIPKKLGGTGNTKSMSSAGRTSERISSD 637
Query: 602 KRTV 605
KR+V
Sbjct: 638 KRSV 641
>gi|297801602|ref|XP_002868685.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314521|gb|EFH44944.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 623
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/636 (63%), Positives = 481/636 (75%), Gaps = 46/636 (7%)
Query: 1 MFHSWVRAVLARKSSLGFGLFGRSISS----STNPVNLCKPFNFT-LNNYSHIRASAAGS 55
M S VRA+ ARK+ + R + S S + + FNF+ L S +R + +
Sbjct: 1 MSQSLVRAISARKNQFSLKFYYRCVYSKQFHSQDQIIAPNCFNFSSLGFTSSVRHGSHQN 60
Query: 56 LYQVGSSLKCNL----LPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVD 111
Y+ +L +L L GF V +++ + D K K +Y+KP+D
Sbjct: 61 SYRFCGNLISDLNLACLVRSTNGFATVSDESNVDNGEK-------LVDKKPKVVYKKPID 113
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
FTKID NLLPTVM++GRPNVGKSAL+NR REALVYNTPDDHVTRDIREG+AKLGDLR
Sbjct: 114 FTKIDANLLPTVMLMGRPNVGKSALYNR----REALVYNTPDDHVTRDIREGIAKLGDLR 169
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
F VLDSAG+ETE +SG+IL RT MTANVLA+TQFA+ +IDVR+GLHPLDLEVGKWLRKH
Sbjct: 170 FNVLDSAGIETEVSSGTILGRTTAMTANVLARTQFAVLIIDVRAGLHPLDLEVGKWLRKH 229
Query: 232 APQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
APQIKPIV MNK ES+ GSL A+E+L LGFG+PIAISAETGLGMT LYE LRP +
Sbjct: 230 APQIKPIVVMNKSESI----GSLDEVASEALALGFGEPIAISAETGLGMTTLYEVLRPLL 285
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
EDYM+ +LND C+Q+++ + + S E DESKLPLQLAIVG+PNVGKSTLLNALL+E+RVL
Sbjct: 286 EDYMVEMLNDICSQDDALSNENLSDEIDESKLPLQLAIVGKPNVGKSTLLNALLEEERVL 345
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVA 410
VGPEAGLTRD+VRV FE+QGRTVYLVDTAGWL+R E++KGPASLS+MQSRK+LMRAHV+A
Sbjct: 346 VGPEAGLTRDAVRVQFEFQGRTVYLVDTAGWLERTERDKGPASLSIMQSRKSLMRAHVIA 405
Query: 411 LVLDAEEV----------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
LVLDAEE+ RAVEEGRGLVVIVNKMD L GR+NS +YK++KEAVP
Sbjct: 406 LVLDAEEIIKAKCSMTHSEVVIARRAVEEGRGLVVIVNKMDRLRGRENSEMYKKIKEAVP 465
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
EIQTVIPQ+TGIPVVF SALEGRGR+ VM +V DTY++WC RL T RLNRWLRKVM RH
Sbjct: 466 IEIQTVIPQITGIPVVFISALEGRGRMEVMKEVTDTYKRWCSRLSTGRLNRWLRKVMSRH 525
Query: 515 SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
SWKD ++QPKIK+FTQVKARPPTFVAF+SGK L ++++RFLT+SLKEDFDLGG PIRI
Sbjct: 526 SWKDTASQPKIKFFTQVKARPPTFVAFVSGKTQLLESDIRFLTRSLKEDFDLGGTPIRII 585
Query: 575 QRSVPR-----KCGSSSSRQNTGQKVGRTFSDKRTV 605
QR VPR G S + + V RT SDKRT+
Sbjct: 586 QRVVPRAPPSGTGGGGSGNSSKSRVVQRTTSDKRTL 621
>gi|242055911|ref|XP_002457101.1| hypothetical protein SORBIDRAFT_03g001220 [Sorghum bicolor]
gi|241929076|gb|EES02221.1| hypothetical protein SORBIDRAFT_03g001220 [Sorghum bicolor]
Length = 604
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/557 (68%), Positives = 442/557 (79%), Gaps = 24/557 (4%)
Query: 68 LPEVPR-GF-CGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMI 125
LP +PR GF G + A E++ P G + K P+ + DFTK+D LLPTV++
Sbjct: 44 LPPLPRLGFSAGFGYSTATEESVPSARPKGKAKARK-NPMKQSRFDFTKVDAALLPTVIL 102
Query: 126 IGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEAT 185
+GRPNVGKSALFNR IRRREALVYNTP DHVTRDIREG+AKLGDLRF+VLDSAGLET AT
Sbjct: 103 VGRPNVGKSALFNRFIRRREALVYNTPGDHVTRDIREGVAKLGDLRFRVLDSAGLETAAT 162
Query: 186 SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCE 245
SGSIL RTA MT NVLA++QFAIF+IDVR GL PLDLEVG+WLRKHA I +VAMNK E
Sbjct: 163 SGSILARTADMTGNVLARSQFAIFLIDVRDGLQPLDLEVGQWLRKHASGIHTLVAMNKSE 222
Query: 246 SLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQ 305
SL + G L AA E+ LGFGDP+AISAETGLGM ELYE LRP E+YM ++ N+ Q
Sbjct: 223 SL-DEHGLLTAAAGEAHKLGFGDPVAISAETGLGMAELYEILRPLFEEYMFQLPNNDLNQ 281
Query: 306 NNSSTQ-DVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR 364
++ ++ + + E DESKLPLQLAIVGRPNVGKSTLLN LLQE RVLVGPEAGLTRDS+R
Sbjct: 282 DDPISEVETEAHEGDESKLPLQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIR 341
Query: 365 VHFEYQGRTVYLVDTAGWLQRE-KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV----- 418
F++ RTVYLVDTAGW++R KEKGPASLSV+QSRKNLMRAH+VALVLDAE++
Sbjct: 342 AQFQFDNRTVYLVDTAGWMERSGKEKGPASLSVVQSRKNLMRAHIVALVLDAEKIAKSKS 401
Query: 419 -----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+A+EEGRGLVVIVNKMDLL G N L+ +V +AVP EIQTVIPQVTGI
Sbjct: 402 SMNHPEVVIARQAIEEGRGLVVIVNKMDLLRG--NQTLFNKVMDAVPSEIQTVIPQVTGI 459
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKY 527
PVVF SALEGRGR+AVM QVIDTY+KWCLRL TSRLNRWLRKVM RHSWKD + QPK+KY
Sbjct: 460 PVVFVSALEGRGRVAVMRQVIDTYEKWCLRLSTSRLNRWLRKVMSRHSWKDSATQPKVKY 519
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
FTQVKARPPTFVAF+SGK LSD ++RFLTKSLKEDFD+GGIPIRI QRSVPRK + ++
Sbjct: 520 FTQVKARPPTFVAFMSGKTQLSDTDIRFLTKSLKEDFDIGGIPIRIVQRSVPRKASAKTN 579
Query: 588 RQNTGQKVGRTFSDKRT 604
+NTG ++ R +DKRT
Sbjct: 580 TRNTGPRIVRMKTDKRT 596
>gi|449432950|ref|XP_004134261.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 626
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/565 (66%), Positives = 442/565 (78%), Gaps = 27/565 (4%)
Query: 67 LLP----EVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPT 122
LLP + RG+CGV +N E + DG V +KV+ + VDF KI IN+LPT
Sbjct: 60 LLPLAAVHIARGYCGVPENGLPEKRLNDSASDGKVVANKVQGVQRNSVDFKKIPINMLPT 119
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+++GRPNVGKSALFNR I+RREALVYNTPDDHVTRDIREG+AKLGDLRF VLDS+GLET
Sbjct: 120 VVLVGRPNVGKSALFNRFIKRREALVYNTPDDHVTRDIREGVAKLGDLRFVVLDSSGLET 179
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
A+SGSIL+RTA MT NVL K+Q AIF+ID R+GLHP DLEVGKWLR+HAP I +VAMN
Sbjct: 180 TASSGSILERTAKMTENVLLKSQLAIFLIDARAGLHPFDLEVGKWLRRHAPNINLVVAMN 239
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K ESL + + +L A E+ LGFGDP+ ISAETGLGM ELY A++P +E YML+V++D+
Sbjct: 240 KSESLFDNSCTLLAAGLEAQRLGFGDPVPISAETGLGMQELYGAIKPVLEKYMLKVISDN 299
Query: 303 CTQNNSSTQDVTSPEDD---ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ Q S EDD +SK LQLAIVGRPNVGKSTLLN LLQ DRVLVGPEAGLT
Sbjct: 300 GGRDRFH-QVTNSNEDDDTLDSKTKLQLAIVGRPNVGKSTLLNTLLQSDRVLVGPEAGLT 358
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+R FE++GRT+YLVDTAGWL R K EKGP SLSVMQS KNLMRAHVVALVLDAEE+
Sbjct: 359 RDSIRAEFEFEGRTIYLVDTAGWLHRTKEEKGPGSLSVMQSTKNLMRAHVVALVLDAEEI 418
Query: 419 ----------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
RAVEEGR LVVIVNKMDL+ G++N A Y+++ EAVP+EIQTVIP
Sbjct: 419 ARERRSMKHSEVVIARRAVEEGRALVVIVNKMDLMRGKKNFASYEKILEAVPEEIQTVIP 478
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QVTGIPV+F SALEGRGR+ VMHQVI+TY+KWC RL T+RLNRWLRKVM RHSWKDQSAQ
Sbjct: 479 QVTGIPVIFISALEGRGRLEVMHQVIETYEKWCTRLSTARLNRWLRKVMSRHSWKDQSAQ 538
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
PK+KYFTQVKARPPTFVAF+SGK LSD ++RFLTKSLKEDF+LGGIPIRI QR VP+K
Sbjct: 539 PKVKYFTQVKARPPTFVAFVSGKIRLSDTDIRFLTKSLKEDFNLGGIPIRIMQRVVPKKT 598
Query: 583 --GSSSSRQNTGQKVGRTFSDKRTV 605
G S ++ + R S+KR++
Sbjct: 599 VDGGGKSNKHVVRTPERIRSNKRSL 623
>gi|296084119|emb|CBI24507.3| unnamed protein product [Vitis vinifera]
Length = 739
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/596 (66%), Positives = 453/596 (76%), Gaps = 74/596 (12%)
Query: 84 LEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRR 143
LED++V + + ++K + V+FTK+D+NLLPTV+++GRPNVGKSALFNRLIRR
Sbjct: 106 LEDSNVGFDDVAPTDGPQIKDGNKNLVEFTKVDVNLLPTVILVGRPNVGKSALFNRLIRR 165
Query: 144 REALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAK 203
REALVYNTPDDHVTRD REG+AKLGDLRF+VLDSAGLE ATSGSIL RTA MTANVLA+
Sbjct: 166 REALVYNTPDDHVTRDFREGIAKLGDLRFRVLDSAGLEMAATSGSILGRTADMTANVLAR 225
Query: 204 TQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLM 263
+QFAIF+IDVR+GLHP+DLEVGKWLR+HAP I I+ MNK ESL +G G LA AA E+
Sbjct: 226 SQFAIFLIDVRAGLHPMDLEVGKWLRRHAPGICTILVMNKSESLDDGAGLLAAAAGEAYE 285
Query: 264 LGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN----------------------- 300
LGFGDPIAISAETGLGM ELYE+LRP +ED+ML+VL+
Sbjct: 286 LGFGDPIAISAETGLGMAELYESLRPLLEDHMLQVLDETECGFWKATGLSIPLLWDSLLH 345
Query: 301 -----------DSCTQNNSS--------------------TQDVTSPEDDESKLPLQLAI 329
D N SS +Q+ +S + +ESK PLQLAI
Sbjct: 346 AQNEEVGREWEDLTIGNISSVVFWFSSIYAAASGALAYKGSQENSSCDVEESKSPLQLAI 405
Query: 330 VGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-E 388
VGRPNVGKSTLLN LLQE+RVLVGPEAGLTRDSVR F++QGRTVYLVDTAGWLQR K E
Sbjct: 406 VGRPNVGKSTLLNTLLQENRVLVGPEAGLTRDSVRAQFQFQGRTVYLVDTAGWLQRTKQE 465
Query: 389 KGPASLSVMQSRKNLMRAHVVALVLDAEEV----------------RAVEEGRGLVVIVN 432
KGPASLSVMQSRK++MRAHVVALVLDAEE+ RAVEEGRGLVVIVN
Sbjct: 466 KGPASLSVMQSRKSIMRAHVVALVLDAEEIANARSSMKHAEVVIARRAVEEGRGLVVIVN 525
Query: 433 KMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQ 492
KMDLL GR+NS LY++V EAVP+EIQ VIPQVTGIPVVF SALEGRGRI+VM QVIDTY+
Sbjct: 526 KMDLLKGRKNSKLYEKVMEAVPEEIQMVIPQVTGIPVVFISALEGRGRISVMRQVIDTYE 585
Query: 493 KWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAE 552
KWCLRL T+RLNRWLRKVM RHSWKDQ+AQPKIKYFTQVKARPPTFVAF+ GK LS+ +
Sbjct: 586 KWCLRLSTARLNRWLRKVMSRHSWKDQAAQPKIKYFTQVKARPPTFVAFMGGKTQLSNTD 645
Query: 553 LRFLTKSLKEDFDLGGIPIRITQRSVPRK---CGSSSSRQNTGQKVGRTFSDKRTV 605
LRFLTKSLKEDFDLGGIPIRI QRS+P+K G++ S + G+ R SDKR+V
Sbjct: 646 LRFLTKSLKEDFDLGGIPIRIMQRSIPKKLGGTGNTKSMSSAGRTSERISSDKRSV 701
>gi|414875662|tpg|DAA52793.1| TPA: hypothetical protein ZEAMMB73_456660 [Zea mays]
Length = 616
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/547 (69%), Positives = 432/547 (78%), Gaps = 23/547 (4%)
Query: 77 GVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSAL 136
G + A ED+ +P + K P+ + DFTK+D LLPTV+++GRPNVGKSAL
Sbjct: 66 GFGYSPATEDSAAAAKPKTKTKARK-HPMKQSRFDFTKVDAALLPTVILVGRPNVGKSAL 124
Query: 137 FNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGM 196
FNR IRRREALVYNTP DHVTRDIREG+AKLGDLRF+VLDSAGLET ATSGSIL RTA M
Sbjct: 125 FNRFIRRREALVYNTPGDHVTRDIREGVAKLGDLRFRVLDSAGLETAATSGSILARTADM 184
Query: 197 TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAG 256
T NVLA++QFAIF+IDVR GL PLDLEVG+WLRKHA I +VAMNK ESL + G L
Sbjct: 185 TGNVLARSQFAIFLIDVRDGLQPLDLEVGQWLRKHASGIHTLVAMNKSESL-DEHGFLTA 243
Query: 257 AAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSP 316
AA E+ LGFGDP+AISAETGLGM ELYE LRP E+YM ++ N+ Q++ ++ T
Sbjct: 244 AAGEAHKLGFGDPVAISAETGLGMAELYEILRPLFEEYMFQLRNNDLNQDDPISEVETEA 303
Query: 317 ED-DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 375
D DESKLPLQLAIVGRPNVGKSTLLN LLQE RVLVGPEAGLTRDS+R F++ RTVY
Sbjct: 304 HDGDESKLPLQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRAQFQFDSRTVY 363
Query: 376 LVDTAGWLQRE-KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV---------------- 418
LVDTAGW++R KEKGPASLSV+QSRKNLMRAH+VALVLDAE++
Sbjct: 364 LVDTAGWMERSGKEKGPASLSVVQSRKNLMRAHIVALVLDAEKIAKSKSSMNHPEIVIAR 423
Query: 419 RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGR 478
+A+EEGRGLVVIVNKMDLL R N L+ +V +AVP+EIQTVIPQVTGIP VF SALEGR
Sbjct: 424 QAIEEGRGLVVIVNKMDLL--RDNQTLFNKVMDAVPREIQTVIPQVTGIPAVFVSALEGR 481
Query: 479 GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTF 538
GRIAVM QVIDTY+KWCLRL TSRLNRWLRKVM RHSWKD + QPK+KYFTQVKARPPTF
Sbjct: 482 GRIAVMRQVIDTYEKWCLRLSTSRLNRWLRKVMSRHSWKDSATQPKVKYFTQVKARPPTF 541
Query: 539 VAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC-GSSSSRQNTGQKVGR 597
VAF+SGK LSD + RFLTKSLKEDFD+GGIPIRI QRSVPRK ++ +NTG +V R
Sbjct: 542 VAFMSGKTQLSDTDTRFLTKSLKEDFDIGGIPIRIIQRSVPRKAYAKRNNTRNTGPRVVR 601
Query: 598 TFSDKRT 604
+DKRT
Sbjct: 602 MKTDKRT 608
>gi|357127691|ref|XP_003565512.1| PREDICTED: GTPase Der-like [Brachypodium distachyon]
Length = 608
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/544 (68%), Positives = 431/544 (79%), Gaps = 34/544 (6%)
Query: 89 VEPEPDGVVEDHKVK----PLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRR 144
VEPE HKVK P+ + VDFTK+D LLPT++++GRPNVGKSALFNRLIRRR
Sbjct: 63 VEPEAPA---RHKVKIRKSPMKQSRVDFTKVDAALLPTIILVGRPNVGKSALFNRLIRRR 119
Query: 145 EALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKT 204
EALVYNTP DHVTRDIREG+AKLGDLRF+VLDSAGLET ATSGSIL RTA MT NVL ++
Sbjct: 120 EALVYNTPGDHVTRDIREGIAKLGDLRFRVLDSAGLETAATSGSILARTADMTGNVLVRS 179
Query: 205 QFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLML 264
QFAIF+IDVR GL PLDLEVG+WLRKHA I IVAMNK ESL + G L AA E+ L
Sbjct: 180 QFAIFLIDVRDGLQPLDLEVGQWLRKHASGIHTIVAMNKSESL-DEHGVLTSAAGEAHRL 238
Query: 265 GFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQN-------NSSTQDVTSPE 317
GFGDP+AISAETGLGM ELYE LRP E+YM ++ N +C + + T + + E
Sbjct: 239 GFGDPVAISAETGLGMAELYEILRPLFEEYMFQLPNSNCHSHMTDGLNQDDPTSEAEANE 298
Query: 318 DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLV 377
DESKLPLQLAIVGRPNVGKSTLLNALLQE RVLVGPEAGLTRDS+R F++ R+VYLV
Sbjct: 299 GDESKLPLQLAIVGRPNVGKSTLLNALLQEQRVLVGPEAGLTRDSIRAEFQFDNRSVYLV 358
Query: 378 DTAGWLQRE-KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------------RA 420
DTAGW++R KEKGP+SLSV+QSRKNLMRAH+VALVLDAE++ +A
Sbjct: 359 DTAGWMERSGKEKGPSSLSVVQSRKNLMRAHIVALVLDAEKIANSKSSMNHPEVVIARQA 418
Query: 421 VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGR 480
+EEGRGLVV+VNKMDLL R+N L +V +AVP+EIQTVIPQVTGIPVVF SALEGRGR
Sbjct: 419 IEEGRGLVVVVNKMDLL--RENQRLLDKVIDAVPKEIQTVIPQVTGIPVVFVSALEGRGR 476
Query: 481 IAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVA 540
+AVMHQVIDTY+KWC RL TSRLNRWLRKVM RHSWKD + QPK+KYFTQVKARPPTFVA
Sbjct: 477 VAVMHQVIDTYEKWCFRLSTSRLNRWLRKVMSRHSWKDSATQPKVKYFTQVKARPPTFVA 536
Query: 541 FLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGRTFS 600
F++GK LSD + RFLTKSLKEDF++GGIPIRI QRS+PRK + S+ + G + R +
Sbjct: 537 FMTGKSQLSDTDTRFLTKSLKEDFNIGGIPIRILQRSIPRKAVAKSNIKKRGSTIIRMKT 596
Query: 601 DKRT 604
DKRT
Sbjct: 597 DKRT 600
>gi|10176988|dbj|BAB10220.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 514
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/474 (74%), Positives = 406/474 (85%), Gaps = 23/474 (4%)
Query: 124 MIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETE 183
M++GRPNVGKSAL+NRLIRRREALVYNTPDDHVTRDIREG+AKLGDLRF VLDSAG+ETE
Sbjct: 1 MLMGRPNVGKSALYNRLIRRREALVYNTPDDHVTRDIREGIAKLGDLRFNVLDSAGIETE 60
Query: 184 ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNK 243
+SG+IL RT MTANVLA+TQFA+ +IDVR+GLHPLDLEVGKWLRKHAPQIKPIV MNK
Sbjct: 61 VSSGTILGRTTAMTANVLARTQFAVLIIDVRAGLHPLDLEVGKWLRKHAPQIKPIVVMNK 120
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSC 303
ES+ GSL A+E+L LGFG+PIAISAETGLGMT LYE LRP +EDY + +LN S
Sbjct: 121 SESI----GSLDEVASEALALGFGEPIAISAETGLGMTTLYEVLRPLLEDYTVEMLNGS- 175
Query: 304 TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 363
Q++ T + S E DESKLPLQLAIVG+PNVGKSTLLNALL+E+RVLVGPEAGLTRD+V
Sbjct: 176 -QDDVLTDENLSDEIDESKLPLQLAIVGKPNVGKSTLLNALLEEERVLVGPEAGLTRDAV 234
Query: 364 RVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV---- 418
RV FE+QGRTVYLVDTAGWL+R E++KGPASLS+MQSRK+LMRAHV+ALVLDAEE+
Sbjct: 235 RVQFEFQGRTVYLVDTAGWLERTERDKGPASLSIMQSRKSLMRAHVIALVLDAEEIIKAK 294
Query: 419 ------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
RAVEEGRGLVVIVNKMD L GR+NS +YK++KEAVP EIQTVIPQ+TG
Sbjct: 295 CSMTHSEVVIARRAVEEGRGLVVIVNKMDRLRGRENSEMYKKIKEAVPIEIQTVIPQITG 354
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIK 526
IPVVF SALEGRGR+ VM +V DTY++WC RL T RLNRWLRKVM RHSWKD ++QPKIK
Sbjct: 355 IPVVFISALEGRGRMEVMKEVTDTYKRWCSRLSTGRLNRWLRKVMSRHSWKDTASQPKIK 414
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+FTQVKARPPTFVAF+SGK L ++++RFLT+SLKEDFDLGG PIRI QR +PR
Sbjct: 415 FFTQVKARPPTFVAFVSGKTQLLESDIRFLTRSLKEDFDLGGTPIRIIQRVIPR 468
>gi|222618017|gb|EEE54149.1| hypothetical protein OsJ_00948 [Oryza sativa Japonica Group]
Length = 725
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/609 (61%), Positives = 440/609 (72%), Gaps = 78/609 (12%)
Query: 67 LLPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMII 126
LL P G G V + +++ +P G + P+ + DFTK+D LLPTV+++
Sbjct: 44 LLSRFP-GSAGFVYSTVADESTAPVKPKGKARKN---PMKQSRFDFTKVDAALLPTVILV 99
Query: 127 GRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATS 186
GRPNVGKSALFNR IRRREALVYNTP DHVTRDIREG+AKLGDLRF+VLDSAGLET ATS
Sbjct: 100 GRPNVGKSALFNRFIRRREALVYNTPGDHVTRDIREGVAKLGDLRFRVLDSAGLETAATS 159
Query: 187 GSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCES 246
GSIL RTA MT NVLA++QFAIF+IDVR GL PLDLEVG+WLR+HA I IVAMNK ES
Sbjct: 160 GSILARTADMTGNVLARSQFAIFLIDVRDGLQPLDLEVGQWLRRHASGIHTIVAMNKSES 219
Query: 247 LHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQN 306
L + G L AA E+ LGFGDP+AISAETGLGM ELYE LRP EDYM ++ N+ Q+
Sbjct: 220 L-DEHGVLTAAAGEAHRLGFGDPVAISAETGLGMAELYETLRPLFEDYMFQLTNNGLNQD 278
Query: 307 NSSTQ-DVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRV 365
+ +++ + + E DESKLPLQLAIVGRPNVGKSTLLN LLQE RVLVGPEAGLTRDS+R
Sbjct: 279 DPTSEAETEAHEGDESKLPLQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRT 338
Query: 366 HFEYQGRTVYLVDTAGWLQRE-KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV------ 418
F++ RTVYLVDTAGW++R KEKGPASLSV+QSRKNLMRAH+VALVLD E++
Sbjct: 339 QFQFDNRTVYLVDTAGWMERSGKEKGPASLSVVQSRKNLMRAHIVALVLDGEKIAKSKSS 398
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+A+EEGRGLVVIVNKMDLL R+N L+ +V +AVP+EIQTVIPQVTGIP
Sbjct: 399 MNHPEVLIARQAIEEGRGLVVIVNKMDLL--RENRPLFDKVIDAVPKEIQTVIPQVTGIP 456
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK------------------- 509
VVF SALEGRGRIAVM QVIDTY+KWCLRL TSRLNRWLRK
Sbjct: 457 VVFMSALEGRGRIAVMRQVIDTYEKWCLRLSTSRLNRWLRKIDLSQGSSQIHPSQGRSTC 516
Query: 510 ---------------------------------VMGRHSWKDQSAQPKIKYFTQVKARPP 536
VM RHSWKD + QPK+KYFTQVKARPP
Sbjct: 517 RVECWIHSESAGKERRKRRRACARKKKRHQGGAVMSRHSWKDSATQPKVKYFTQVKARPP 576
Query: 537 TFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVG 596
TFVAF+SGK LSD ++RFLTKSLKEDFD+GGIPIR+ QR++PRK S+ +NTG ++
Sbjct: 577 TFVAFMSGKVQLSDTDIRFLTKSLKEDFDIGGIPIRVVQRTIPRKETVKSNSRNTGPRIN 636
Query: 597 -RTFSDKRT 604
R +DKRT
Sbjct: 637 TRMRTDKRT 645
>gi|125524978|gb|EAY73092.1| hypothetical protein OsI_00968 [Oryza sativa Indica Group]
Length = 627
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/537 (64%), Positives = 396/537 (73%), Gaps = 74/537 (13%)
Query: 139 RLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTA 198
R IRRREALVYNTP DHVTRDIREG+AKLGDLRF+VLDSAGLET ATSGSIL RTA MT
Sbjct: 14 RFIRRREALVYNTPGDHVTRDIREGVAKLGDLRFRVLDSAGLETAATSGSILARTADMTG 73
Query: 199 NVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAA 258
NVLA++QFAIF+IDVR GL PLDLEVG+WLR+HA I IVAMNK ESL + G L AA
Sbjct: 74 NVLARSQFAIFLIDVRDGLQPLDLEVGQWLRRHASGIHTIVAMNKSESL-DEHGVLTAAA 132
Query: 259 AESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNN-SSTQDVTSPE 317
E+ LGFGDP+AISAETGLGM ELYE LRP EDYM ++ N+ Q++ +S + + E
Sbjct: 133 GEAHRLGFGDPVAISAETGLGMAELYETLRPLFEDYMFQLTNNGLNQDDPTSEAETEAHE 192
Query: 318 DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLV 377
DESKLPLQLAIVGRPNVGKSTLLN LLQE RVLVGPEAGLTRDS+R F++ RTVYLV
Sbjct: 193 GDESKLPLQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRTQFQFDNRTVYLV 252
Query: 378 DTAGWLQRE-KEKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------------RA 420
DTAGW++R KEKGPASLSV+QSRKNLMRAH+VALVLD E++ +A
Sbjct: 253 DTAGWMERSGKEKGPASLSVVQSRKNLMRAHIVALVLDGEKIAKSKSSMNHPEVLIARQA 312
Query: 421 VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGR 480
+EEGRGLVVIVNKMDLL R+N L+ +V +AVP+EIQTVIPQVTGIPVVF SALEGRGR
Sbjct: 313 IEEGRGLVVIVNKMDLL--RENRPLFDKVIDAVPKEIQTVIPQVTGIPVVFMSALEGRGR 370
Query: 481 IAVMHQVIDTYQKWCLRLPTSRLNRWLRK------------------------------- 509
IAVM QVIDTY+KWCLRL TSRLNRWLRK
Sbjct: 371 IAVMRQVIDTYEKWCLRLSTSRLNRWLRKIDLSQGSSQIHPSQGRSTCRVECWIHSESAG 430
Query: 510 ---------------------VMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTL 548
VM RHSWKD + QPK+KYFTQVKARPPTFVAF+SGK L
Sbjct: 431 KERRKRRRACARKKKRHQGGAVMSRHSWKDSATQPKVKYFTQVKARPPTFVAFMSGKVQL 490
Query: 549 SDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVG-RTFSDKRT 604
SD ++RFLTKSLKEDFD+GGIPIR+ QRS+PRK S+ +NTG ++ R +DKRT
Sbjct: 491 SDTDIRFLTKSLKEDFDIGGIPIRVVQRSIPRKETVKSNSRNTGPRINTRMRTDKRT 547
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 51 SAAGSLYQVGSSLKCNLLPEVPRGFCGVVQN--EALEDTHVEPEPDGVVEDHKVKPLYEK 108
+AAG +++G + E G + + ED + +G+ +D P E
Sbjct: 130 AAAGEAHRLGFGDPVAISAETGLGMAELYETLRPLFEDYMFQLTNNGLNQD---DPTSEA 186
Query: 109 PVDFTKIDINLLP-TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKL 167
+ + D + LP + I+GRPNVGKS L N L++ + LV P+ +TRD +
Sbjct: 187 ETEAHEGDESKLPLQLAIVGRPNVGKSTLLNTLLQEQRVLV--GPEAGLTRDSIRTQFQF 244
Query: 168 GDLRFKVLDSAG 179
+ ++D+AG
Sbjct: 245 DNRTVYLVDTAG 256
>gi|168063155|ref|XP_001783539.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664926|gb|EDQ51628.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 522
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 280/505 (55%), Positives = 364/505 (72%), Gaps = 37/505 (7%)
Query: 102 VKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIR 161
+K L E P+D L V+++GRPNVGKSALFNRL +RREALVYNTPD HVTRD+R
Sbjct: 16 LKRLLEPPID-------TLSKVLLVGRPNVGKSALFNRLTKRREALVYNTPDSHVTRDVR 68
Query: 162 EGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLD 221
EG+AKLGD+RF+V+D+AGLET+A + S+L RTAG+TA L Q A+F++D RSG+ PLD
Sbjct: 69 EGVAKLGDMRFRVMDTAGLETDAEAASVLYRTAGLTAAALRNCQIALFLVDGRSGVQPLD 128
Query: 222 LEVGKWLRKHAPQIKPIVAMNKCESLHN-GTGSLAGAAAESLMLGFGDPIAISAETGLGM 280
EVGKWLRK AP ++ V +NK E +H+ +GSL A E+ LGFG P+AISAE+GLG+
Sbjct: 129 AEVGKWLRKLAPNVRVKVLLNKAEGMHDDASGSLMAAMGEAYSLGFGTPVAISAESGLGL 188
Query: 281 TELYEALRP---SVEDYMLRV-----LNDS----CTQNNSSTQDVTSPEDDESKLPLQLA 328
+LYE LRP S+ED + L D+ N + + E + ++P+QLA
Sbjct: 189 ADLYEDLRPWLSSLEDISINSEVRLSLGDTDEFETKLNLNEENEALMSEAELKRVPMQLA 248
Query: 329 IVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE 388
I GRPNVGKSTLLN+LL E+RVL GPE GLTRDS+RV FEY+ + ++LVDTAGW+QR+K
Sbjct: 249 IAGRPNVGKSTLLNSLLMEERVLTGPEPGLTRDSIRVEFEYENQKIFLVDTAGWMQRKKL 308
Query: 389 K-GPASLSVMQSRKNLMRAHVVALVLDAEEVR----------------AVEEGRGLVVIV 431
K GPA+LS M +R+N+ RAHVV LVLDA+E+ V+EGRGLVV+V
Sbjct: 309 KEGPAALSAMNARRNVQRAHVVTLVLDAQEIAETKRSMRHTEAALAQWVVQEGRGLVVVV 368
Query: 432 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 491
NKMDLL+G +++ L V +AVP+EI ++PQVTG+P+VF SALEG+GR AVM V ++Y
Sbjct: 369 NKMDLLAGSEHARLRSLVMKAVPEEITKLLPQVTGVPIVFVSALEGKGRAAVMRHVNESY 428
Query: 492 QKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDA 551
+ WC+RLPT++LNRW+RKVM RH + K++Y TQVKARPPTFV F+SG+ L D
Sbjct: 429 RLWCVRLPTAKLNRWIRKVMSRHPKGGEGHGAKVRYITQVKARPPTFVVFVSGQGKLDDT 488
Query: 552 ELRFLTKSLKEDFDLGGIPIRITQR 576
ELRF+ +L+EDF L GIPIR+ QR
Sbjct: 489 ELRFIASALREDFGLVGIPIRVFQR 513
>gi|302790107|ref|XP_002976821.1| hypothetical protein SELMODRAFT_105942 [Selaginella moellendorffii]
gi|300155299|gb|EFJ21931.1| hypothetical protein SELMODRAFT_105942 [Selaginella moellendorffii]
Length = 471
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 327/475 (68%), Gaps = 28/475 (5%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V+I+GRPNVGKS+L+NRL+ R+EA+VY+TPD HVTRDIREG AKL DLRFKV DSAG
Sbjct: 1 MPSVIILGRPNVGKSSLYNRLVHRKEAIVYDTPDSHVTRDIREGSAKLSDLRFKVFDSAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LET ++L RT G+TA L A+F+ID R+G+ PLD E W RK + ++
Sbjct: 61 LETSEEGETVLARTTGLTATFLRTCHAALFLIDGRAGVSPLDKEAVMWFRKLNLNLPVVL 120
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + G + AES LG GDP+ +SAETG G+ +L++ L+P ++ +++
Sbjct: 121 VVNKAEKI-TGDHQIMANIAESYSLGLGDPVPVSAETGEGLADLFQRLQPILDAAKEKLV 179
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + S + PL+LAI GR NVGKST++N+LL+++RVL GPE GLT
Sbjct: 180 DEEEEEEKSLG----------GQKPLRLAIAGRTNVGKSTVINSLLRKERVLTGPEPGLT 229
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ + FE+ + V LVDTAGW+QR + E+GP +LS M +R++LM AHVVA+VLDA+E+
Sbjct: 230 RDAITIDFEFNKKPVRLVDTAGWIQRSQLEEGPMALSAMLARRSLMTAHVVAIVLDAQEI 289
Query: 419 R----------------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+EGR L+++VNKMD+L G++N+ L K++ EAVP+EIQ +P
Sbjct: 290 AQSKMTLRNSEAALARWVTDEGRALIIVVNKMDVLKGQKNADLRKKLMEAVPKEIQLTLP 349
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++F SAL+GRGR +M + Y KWC R+ T RLNRWL KV+ RH + +
Sbjct: 350 QVLGVPIIFVSALKGRGRSTIMKLAFEAYDKWCTRVSTPRLNRWLHKVLARHPKRKDEKR 409
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K +Y TQVKARPPTFV F++G +L D ELRF++ +++EDF++GGIP+R+ QR+
Sbjct: 410 AKPRYITQVKARPPTFVLFVAGFYSLEDHELRFISNAIREDFNMGGIPVRVIQRT 464
>gi|302797579|ref|XP_002980550.1| hypothetical protein SELMODRAFT_112935 [Selaginella moellendorffii]
gi|300151556|gb|EFJ18201.1| hypothetical protein SELMODRAFT_112935 [Selaginella moellendorffii]
Length = 471
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 326/475 (68%), Gaps = 28/475 (5%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V+I+GRPNVGKS+L+NRL+ R+EA+VY+TPD HVTRDIREG AKL DLRFKV DSAG
Sbjct: 1 MPSVIILGRPNVGKSSLYNRLVHRKEAIVYDTPDSHVTRDIREGSAKLSDLRFKVFDSAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LET ++L RT G+TA L A+F+ID R+G+ PLD E W RK + ++
Sbjct: 61 LETSEEGATVLARTTGLTATFLRTCHAALFLIDGRAGVSPLDKEAVMWFRKLNLNLPVVL 120
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + G + AES LG GDP+ +SAETG G+ +L++ L+P ++ +++
Sbjct: 121 VVNKAEKI-TGDHQIMANIAESYSLGLGDPVPVSAETGEGLADLFQRLQPILDAAKEKLV 179
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + S + PL+LAI GR NVGKST++N+LL+++RVL GPE GLT
Sbjct: 180 EEEEEEEKSLG----------GQKPLRLAIAGRTNVGKSTVINSLLRKERVLTGPEPGLT 229
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ + FE+ + V LVDTAGW+QR + E+GP +LS M +R++LM AHVVA+VLDA+E+
Sbjct: 230 RDAITIDFEFNKKPVRLVDTAGWIQRSQLEEGPMALSAMLARRSLMTAHVVAIVLDAQEI 289
Query: 419 R----------------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+EGR L+++VNKMD+L G++N+ L K++ EAVP+EIQ +P
Sbjct: 290 AHSKMTLRNSEAALARWVTDEGRALIIVVNKMDVLKGQKNADLRKKLMEAVPKEIQLTLP 349
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++F SAL+GRGR +M + Y KWC R+ T RLNRWL KV+ RH + +
Sbjct: 350 QVLGVPIIFVSALKGRGRSTIMKLAFEAYDKWCTRVSTPRLNRWLHKVLARHPKRKDEKR 409
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K +Y TQVKARPPTFV F++G +L D ELRF++ +++EDF++GGIP+R+ QR+
Sbjct: 410 AKPRYITQVKARPPTFVLFVAGFYSLEDHELRFISNAIREDFNMGGIPVRVIQRT 464
>gi|147862085|emb|CAN80885.1| hypothetical protein VITISV_016760 [Vitis vinifera]
Length = 355
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/329 (70%), Positives = 263/329 (79%), Gaps = 31/329 (9%)
Query: 307 NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH 366
+ +Q+ +S + +ESK PLQLAIVGRPNVGKSTLLN LLQE+RVLVGPEAGLTRDSVR
Sbjct: 18 DKGSQENSSCDVEESKSPLQLAIVGRPNVGKSTLLNTLLQENRVLVGPEAGLTRDSVRAQ 77
Query: 367 FEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV------- 418
F++QGRTVYLVDTAGWLQR K EKGPASLSVMQSRK++MRAHVVALVLDAEE+
Sbjct: 78 FQFQGRTVYLVDTAGWLQRTKQEKGPASLSVMQSRKSIMRAHVVALVLDAEEIANARSSM 137
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP- 468
RAVEEGRGLVVIVNKMDLL GR+NS LY++V EAVP+EIQ VIPQ+ +
Sbjct: 138 KHAEVVIARRAVEEGRGLVVIVNKMDLLKGRKNSKLYEKVMEAVPEEIQMVIPQLLDVGI 197
Query: 469 ---------VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
VVFTS LEGRGRI+VM QVIDTY+KWCLRL T+RLNRWLRKVM RHSWKDQ
Sbjct: 198 RIEEVIVFLVVFTS-LEGRGRISVMRQVIDTYEKWCLRLSTARLNRWLRKVMSRHSWKDQ 256
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+AQPKIKYFTQVKARPPTFVAF+ GK LS+ +LRFLTKSLKEDFDLGGIPIRI QRS+P
Sbjct: 257 AAQPKIKYFTQVKARPPTFVAFMGGKTQLSNTDLRFLTKSLKEDFDLGGIPIRIMQRSIP 316
Query: 580 RK---CGSSSSRQNTGQKVGRTFSDKRTV 605
+K G++ S + G+ R SDKR+V
Sbjct: 317 KKLGGTGNTKSMSSAGRTSERISSDKRSV 345
>gi|449525790|ref|XP_004169899.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 342
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/317 (70%), Positives = 254/317 (80%), Gaps = 22/317 (6%)
Query: 311 QDVTSPEDDE---SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF 367
Q S EDD+ SK LQLAIVGRPNVGKSTLLN LLQ DRVLVGPEAGLTRDS+R F
Sbjct: 23 QVTNSNEDDDTLDSKTKLQLAIVGRPNVGKSTLLNTLLQSDRVLVGPEAGLTRDSIRAEF 82
Query: 368 EYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV-------- 418
E++GRT+YLVDTAGWL R KE KGP SLSVMQS KNLMRAHVVALVLDAEE+
Sbjct: 83 EFEGRTIYLVDTAGWLHRTKEEKGPGSLSVMQSTKNLMRAHVVALVLDAEEIARERRSMK 142
Query: 419 --------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
RAVEEGR LVVIVNKMDL+ G++N A Y+++ EAVP+EIQTVIPQVTGIPV+
Sbjct: 143 HSEVVIARRAVEEGRALVVIVNKMDLMRGKKNFASYEKILEAVPEEIQTVIPQVTGIPVI 202
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYFTQ 530
F SALEGRGR+ VMHQVI+TY+KWC RL T+RLNRWLRKVM RHSWKDQSAQPK+KYFTQ
Sbjct: 203 FISALEGRGRLEVMHQVIETYEKWCTRLSTARLNRWLRKVMSRHSWKDQSAQPKVKYFTQ 262
Query: 531 VKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC--GSSSSR 588
VKARPPTFVAF+SGK LSD ++RFLTKSLKEDF+LGGIPIRI QR VP+K G S
Sbjct: 263 VKARPPTFVAFVSGKIRLSDTDIRFLTKSLKEDFNLGGIPIRIMQRVVPKKTVDGGGKSN 322
Query: 589 QNTGQKVGRTFSDKRTV 605
++ + R S+KR++
Sbjct: 323 KHVVRTPERIRSNKRSL 339
>gi|356564434|ref|XP_003550459.1| PREDICTED: LOW QUALITY PROTEIN: GTPase Der-like [Glycine max]
Length = 335
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/326 (62%), Positives = 247/326 (75%), Gaps = 31/326 (9%)
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+C ++ +D + D+SKLPLQLAI+GRPNVGKSTLLNALLQED VLVGPEAGLTRD
Sbjct: 16 ACLYSHHEVEDSCDLDVDKSKLPLQLAILGRPNVGKSTLLNALLQEDHVLVGPEAGLTRD 75
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
S+R FE+QGRT+YLVDTAGWLQ + G +MQSRK+L++AH++ALVLDAEE+
Sbjct: 76 SIRTQFEFQGRTIYLVDTAGWLQMQSTPG-----IMQSRKSLLQAHIIALVLDAEEIINA 130
Query: 419 -------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
AVEEGRGLVVIVNKM+L G+ S+ Y++V E VPQEIQT+IPQV
Sbjct: 131 RRSMKHAEVIIARWAVEEGRGLVVIVNKMNLPRGKHQSSSYEKVMEIVPQEIQTIIPQVK 190
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKI 525
GIPVVF SALEGRGR V++QVI+TY+KWC RLPT+RLNRWL+KVM RHSWK Q+AQPK+
Sbjct: 191 GIPVVFISALEGRGRTTVLNQVIETYEKWCSRLPTARLNRWLQKVMSRHSWKGQAAQPKV 250
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS- 584
KYFTQVKARPPTFVA LSD ++RFLTKSLKE+FDLGGIPIR+ QR V +K S
Sbjct: 251 KYFTQVKARPPTFVA----XTQLSDTDIRFLTKSLKENFDLGGIPIRLMQRFVTKKDASG 306
Query: 585 -----SSSRQNTGQKVGRTFSDKRTV 605
S + + G+ + RT SDKR+V
Sbjct: 307 SETRTSKNSHSVGRVIERTVSDKRSV 332
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 100 HKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD 159
H+V+ + VD +K+ + L I+GRPNVGKS L N L++ LV P+ +TRD
Sbjct: 22 HEVEDSCDLDVDKSKLPLQL----AILGRPNVGKSTLLNALLQEDHVLV--GPEAGLTRD 75
Query: 160 -IREGLAKLGDLRFKVLDSAG-LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGL 217
IR G + ++D+AG L+ ++T G + R + + A+++A A +I+ R +
Sbjct: 76 SIRTQFEFQGRTIY-LVDTAGWLQMQSTPGIMQSRKSLLQAHIIALVLDAEEIINARRSM 134
Query: 218 HPLDLEVGKW 227
++ + +W
Sbjct: 135 KHAEVIIARW 144
>gi|384247418|gb|EIE20905.1| small GTP-binding protein [Coccomyxa subellipsoidea C-169]
Length = 489
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 194/483 (40%), Positives = 283/483 (58%), Gaps = 46/483 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKSALFNR R + ALV+NTP+ HVTRD R G+ KL DLRF +D++GLE
Sbjct: 3 VAIIGRPNVGKSALFNRFSRCKLALVHNTPEGHVTRDYRRGVGKLADLRFMAVDTSGLEP 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK--HAPQIKPIVA 240
GSI +R +T +V+ + A+ ++D RSGL P D + WLRK AP ++A
Sbjct: 63 FMAKGSIQERATRITLDVVRRCDLALLLVDARSGLVPEDEALVAWLRKCLTAPV---LLA 119
Query: 241 MNKCESL-HNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E +G ++ A +E+ LG G+P+AISAETG G+ +LY A++P ++ +++
Sbjct: 120 ANKAERRGRSGVSGVSDALSEATRLGLGEPVAISAETGEGLVDLYTAMQPMID----KII 175
Query: 300 NDSCTQNNSSTQDVTSP----EDD-ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ +Q + SP EDD E +++A++G+PNVGKSTL N LL +R L GP
Sbjct: 176 EERASQREEAAPKARSPGLAGEDDTEGPQDMKIAVIGQPNVGKSTLCNYLLGRERSLTGP 235
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGP----ASLSVMQSRKNLMRAHV 408
E GLTRD+V FE++G + LVD+AGW++ K E G A ++ Q+ L A V
Sbjct: 236 EPGLTRDAVAEDFEWEGHAIELVDSAGWIRDAKLPEDGCRGAVAGGALRQAEHALNFAQV 295
Query: 409 VALVLDAE----------------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
V L++DA V EGR L++ +NK+DLLS + RV+E
Sbjct: 296 VVLMVDAAVSTQLGAGLTRRELALASSIVREGRALIIALNKLDLLSPLDRDKVVGRVEE- 354
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK--V 510
+++ +P+V G+P + SAL G G V+ + ++ W R+PT+RLNRWL K +
Sbjct: 355 ---QVKESLPEVAGVPCIGVSALTGAGAGEVLPTALQAFRVWNQRVPTARLNRWLIKAGI 411
Query: 511 MGRHSWKDQSAQPKI---KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
+ ++ +A ++ +Y TQV ARPPTF AF+SG + LSD +F+ SL+ F
Sbjct: 412 LSSTEYRGTAAGRQVMRLRYVTQVSARPPTFAAFISGAEELSDNTTKFILNSLRAKFGFP 471
Query: 568 GIP 570
G+P
Sbjct: 472 GVP 474
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLV--GPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+Q+AI+GRPNVGKS L N + LV PE +TRD R + VDT+G
Sbjct: 1 MQVAIIGRPNVGKSALFNRFSRCKLALVHNTPEGHVTRDYRRGVGKLADLRFMAVDTSG 59
>gi|307108122|gb|EFN56363.1| hypothetical protein CHLNCDRAFT_144853 [Chlorella variabilis]
Length = 581
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 291/547 (53%), Gaps = 90/547 (16%)
Query: 113 TKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRF 172
T + +LLP V IIGRPNVGKSALFNRL+RRREA+V++TP HVTRD +EG+A+L DLRF
Sbjct: 31 TALPDSLLPVVAIIGRPNVGKSALFNRLVRRREAVVHDTPGGHVTRDYQEGVARLADLRF 90
Query: 173 KVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-- 230
+V+D++GLE SI R +TA VLA++ A+F++D +G P D E+ +WLRK
Sbjct: 91 RVIDTSGLEPFLPGDSIQARATVLTATVLARSDIALFLVDGSTGTLPADEELARWLRKTV 150
Query: 231 --------HAPQIKPIVAMNKCES-LHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMT 281
A ++A NKCE G ++A A AES+ LG G+P+A+SA TG GMT
Sbjct: 151 VGPGATGPAARSCAVLLAANKCERRGGGGAAAVAAAVAESMRLGLGEPVALSAMTGEGMT 210
Query: 282 ELYEALR----PSVEDYMLRVLNDSCTQNNSSTQDV------------------------ 313
+LY AL+ P E V + ST
Sbjct: 211 DLYAALQPLLDPLTEARRAAVQQIEAPSGSGSTDIAGYSSSDGSDGISGMAAAAAPRGLG 270
Query: 314 ---------------------TSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
TS S +PL++AI+G PNVGKSTL N LL +R L
Sbjct: 271 GQGAAVQQQAGGGEWGKEDPKTSNSGGGSSVPLRIAIMGLPNVGKSTLANWLLGSERCLT 330
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGP--ASLSVMQSRKNLMR 405
GPE GLTRD+++ E++G+ V LVDTAGW++R K E G A +V ++R +
Sbjct: 331 GPEPGLTRDAIKERIEWEGQEVELVDTAGWIRRTKLANYDESGGAVAQQTVAEARGVMQF 390
Query: 406 AHVVALVLDAEEV----------------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRV 449
H VAL++DA V EGR L+++ NK+D L+ + + V
Sbjct: 391 VHAVALLVDAARCLELGQGLTHREITLASDVVAEGRLLLIVANKLDTLTPAKRQHAMRLV 450
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
+EAV +P V+G+P++ SA+ G G ++ Y++W R+PTS LNRW
Sbjct: 451 REAVEDN----LPDVSGVPIIGMSAMTGEGVGMLLPAAAAMYRRWNQRVPTSHLNRW--- 503
Query: 510 VMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
+ +I Y +QVKARPPTFVA++SG LS RF+ ++++F GG+
Sbjct: 504 KAAEYQVGGGQVLNRITYISQVKARPPTFVAWVSGSTALSAPSQRFVAAQIRKEFGFGGV 563
Query: 570 PIRITQR 576
PIRI R
Sbjct: 564 PIRIAVR 570
>gi|154253924|ref|YP_001414748.1| small GTP-binding protein [Parvibaculum lavamentivorans DS-1]
gi|171769688|sp|A7HYV8.1|DER_PARL1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|154157874|gb|ABS65091.1| small GTP-binding protein [Parvibaculum lavamentivorans DS-1]
Length = 473
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/472 (40%), Positives = 282/472 (59%), Gaps = 34/472 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD REG A+LGDL F ++D+AGLE
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRREGEARLGDLSFTIIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
EA +G++ R T +A + +ID R+G+ PLD + LRK + I+A N
Sbjct: 62 EAATGTLEARMRIGTERAIADADLCLLLIDARAGVTPLDKSFSQILRKSPTPV--ILAAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE----DYMLRV 298
KCE G + E+ LG G P+ +SAE G G+ +LY+AL + D +
Sbjct: 120 KCEGGAGKAGRM-----EAYELGLGAPLPLSAEHGEGLGDLYDALAQFAKGLEADDAGQA 174
Query: 299 LNDSCT--QNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ D+ Q+ + D +P + + + PL++AI+GRPNVGKSTL+N LL EDR+L GPEA
Sbjct: 175 VEDALAEEQDADAGFDPDAPYEPDLEAPLRVAIIGRPNVGKSTLVNQLLGEDRMLTGPEA 234
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRDS+ + +E++GR V L DTAG +R + + LSV + + + A VV ++LDA
Sbjct: 235 GITRDSIGIEWEWRGRRVKLWDTAGMRRRARVTEKLEKLSVADTLRAVRFAEVVVILLDA 294
Query: 416 EE---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ VE EGRGL+++VNK D+++ Q V + +E++ ++PQ+
Sbjct: 295 TQPFERQDLHIADLVEQEGRGLLIVVNKWDMVAEPQE------VLRVLKEELERLLPQIR 348
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-K 524
G+P+V SAL GRG +M + + W R+PT+RLNRW+++ + RH +P
Sbjct: 349 GVPIVTLSALTGRGTDKLMPAIERVHTFWNARVPTARLNRWMQEAVSRHQPPAAHGRPVN 408
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+KY +QVK+RPPTF F S + + R+L L+E FDL G+PIR+ R
Sbjct: 409 LKYISQVKSRPPTFAVFSSRADDVPTSYRRYLVNGLRETFDLPGVPIRLFMR 460
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ ++AIVGRPNVGKSTL N L+ + LV G+TRD + ++DTAG
Sbjct: 1 MSFKVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRREGEARLGDLSFTIIDTAG 59
>gi|427427195|ref|ZP_18917240.1| GTP-binding protein EngA [Caenispirillum salinarum AK4]
gi|425883896|gb|EKV32571.1| GTP-binding protein EngA [Caenispirillum salinarum AK4]
Length = 479
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/486 (40%), Positives = 281/486 (57%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ RREA+V++ P VTRD +EG A+L L F+V+D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGRREAIVHDFP--GVTRDRKEGRAQLAGLEFRVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R + MT L + + +ID R GL P D LRK + + +V
Sbjct: 62 -EADPESLAGRMSAMTLGALDQADVCLLLIDARVGLTPADEHFANVLRKQSTPV--LVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP------------ 289
NKCE G L E+ LG G+PI +SAE G GM +L+EAL+P
Sbjct: 119 NKCEGKAGEPGLL-----EAYSLGLGEPIGVSAEHGTGMGDLFEALQPFARTAAHDEAAA 173
Query: 290 -SVEDYMLRVLNDSCTQNNSSTQD-----VTSPEDDESKLPLQLAIVGRPNVGKSTLLNA 343
+++ + ++ S + ++ +D VT+ ED E PL+LAIVGRPN GKSTL+NA
Sbjct: 174 AEMDEDVFDAVDLSDDETLAADEDPDAPAVTTEEDTEK--PLRLAIVGRPNTGKSTLVNA 231
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
L+ E+R+L GPEAG+TRDS+ V + ++ R + L+DTAG ++ + LSV ++ N
Sbjct: 232 LIGEERLLTGPEAGVTRDSIAVDWTFRDRKLRLIDTAGMRRKARISDSLERLSVSETLNN 291
Query: 403 LMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A VV L+LDA V VEEGR LV+ +NK D + A +R+++
Sbjct: 292 IRMAEVVILMLDANMVMDKQDLTIARMVVEEGRALVIGINKWD--AAEDKGATMQRMRD- 348
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
+QT +PQV GIP + SAL+G G +M V+D ++ W R+ T+ LNRWL +
Sbjct: 349 ---RLQTSLPQVRGIPFITLSALKGNGLDRLMQAVLDIHKVWNTRISTAALNRWLEYTLS 405
Query: 513 RH--SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
+H + K++Y TQ KARPPTF S + L ++ +R+L L++DF + G+P
Sbjct: 406 QHPPPLGKTKRRIKLRYMTQAKARPPTFAVSCSLPEDLPESYVRYLVNGLRDDFGMDGVP 465
Query: 571 IRITQR 576
IR+ R
Sbjct: 466 IRMHFR 471
>gi|163797497|ref|ZP_02191448.1| GTP-binding protein engA [alpha proteobacterium BAL199]
gi|159177246|gb|EDP61805.1| GTP-binding protein engA [alpha proteobacterium BAL199]
Length = 467
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 271/474 (57%), Gaps = 33/474 (6%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V +IGRPNVGKS LFNRL R ALV +TP VTRD REG ++ DL F+V+D+AGLE
Sbjct: 5 VAVIGRPNVGKSTLFNRLTGTRHALVDDTP--GVTRDRREGDGRIADLSFRVIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+A S+ R T +A+ +ID R+G+ PLD WLR+ + +V N
Sbjct: 62 DAFDDSLEARMRRQTERAVAEADLVFMLIDARAGITPLDSHFADWLRRV--DVPVVVLAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE---DYMLRVL 299
KCE G AE+ LG GDP+ +SAE G GM ELY+ +R E ++
Sbjct: 120 KCEGRAGAAG-----LAEAYSLGLGDPVPVSAEHGEGMGELYDIIRELAERKGEFGAPEP 174
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ E + P++LAIVGRPNVGKSTL+N L+ EDR+L GPEAG+T
Sbjct: 175 EPEPAWPGEEVELSDEMEAEPEVGPIRLAIVGRPNVGKSTLVNRLIGEDRLLTGPEAGIT 234
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V ++Y+ R + LVDTAG ++ + ++ LS +R+ + AHVV LVLD E +
Sbjct: 235 RDAIEVEWQYRDRPIRLVDTAGMRRKARVQEKLERLSTADTRRAVRYAHVVLLVLDGEMM 294
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A+EEGR LV+ NK D++ + ++ R + T + QV G+P
Sbjct: 295 LEKQDLTIARMALEEGRALVIAANKWDVIQDKNAASQMLR------DRLDTSLTQVRGVP 348
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
V SA+ G ++ V++TY +W R+PT++LNRWL ++ H + + KI+Y
Sbjct: 349 WVPVSAVRGTNLTKLLDAVLETYDRWNTRIPTAKLNRWLEGMLEAHPPPLAKGRRVKIRY 408
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT--QRSVP 579
TQ KARPPTF AF+S L D+ +R+LT L+++F L G+PIR+ QR+ P
Sbjct: 409 MTQAKARPPTFAAFVSQATELPDSYVRYLTGGLRDEFGLVGVPIRLYLRQRANP 462
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +++A++GRPNVGKSTL N L LV G+TRD + ++DTAG
Sbjct: 1 MSIKVAVIGRPNVGKSTLFNRLTGTRHALVDDTPGVTRDRREGDGRIADLSFRVIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
L+ + + Q+ + + A +V +++DA
Sbjct: 60 LEDAFDDSLEARMRRQTERAVAEADLVFMLIDA 92
>gi|23015371|ref|ZP_00055149.1| COG1160: Predicted GTPases [Magnetospirillum magnetotacticum MS-1]
Length = 464
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 198/474 (41%), Positives = 278/474 (58%), Gaps = 41/474 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R A+V++ P VTRD REG A L + F+V+D+AG E
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLAIVHDLP--GVTRDRREGRASLLGMEFQVVDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T SI R T +++ A+ +ID R+G+ PLD LR+ + I+
Sbjct: 62 DD-TGDSIEARMRHQTDMAVSEADVALLLIDARAGVTPLDRHFADHLRRLPTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE G + G ES LG G+P+A+SAE G GM EL+EALR D+ ++
Sbjct: 119 NKCE----GKAGMPGLY-ESYGLGMGEPVAVSAEHGEGMYELFEALR----DHAIKAGAL 169
Query: 302 SCTQNNSSTQDVTSPEDDESK--LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ ++ ++ ED E PL +AIVGRPNVGKSTL N LL +DR+L GPEAGLT
Sbjct: 170 TPDGDDPEPEETFEGEDGEPDPTRPLTMAIVGRPNVGKSTLGNQLLGQDRLLTGPEAGLT 229
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V +E++GR + LVDTAG ++ + LSV + + + + VV LV+DA +
Sbjct: 230 RDAIAVEWEHRGRRMKLVDTAGLRKKAQIYDAIEKLSVGNTIETIRMSEVVVLVMDAAAI 289
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
VEEGR LV+ +NK D++ Q + KR+K+ ++T +PQ G+
Sbjct: 290 LDKQDLTIARMVVEEGRALVLAINKWDVVDDPQTA--LKRLKD----RLETSLPQAKGVT 343
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP----- 523
V SAL G+G +M V+DT+ W R+PT++LNRWL ++ RH A P
Sbjct: 344 TVTLSALTGKGIERLMDGVLDTWTNWNRRIPTAQLNRWLEDMIERHP---PPALPGGRRY 400
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ KARPPTFV F + + L ++ R+L L+E FDL G+PIR+ R
Sbjct: 401 KIRYMTQAKARPPTFVLFATRPEQLPESYSRYLVNGLREAFDLPGVPIRLYVRG 454
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N L+ + +V G+TRD G +VDTAG+
Sbjct: 1 MPFTVAIIGRPNVGKSTLFNRLVGKRLAIVHDLPGVTRDRREGRASLLGMEFQVVDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLM--RAHVVALVLDA 415
E + G + + M+ + ++ A V L++DA
Sbjct: 61 ---EDDTGDSIEARMRHQTDMAVSEADVALLLIDA 92
>gi|144898965|emb|CAM75829.1| Small GTP-binding protein domain:GTP-binding [Magnetospirillum
gryphiswaldense MSR-1]
Length = 470
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 267/474 (56%), Gaps = 38/474 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL RR A+V++ P VTRD RE A L + F+V+D+AG E
Sbjct: 4 TVAIVGRPNVGKSTLFNRLAGRRLAIVHDMPG--VTRDRREAAASLLGMEFRVIDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A SI R T +A+ + +ID R+G+ PLD +LRK + I+
Sbjct: 62 -DAHDESIEARMRYQTDTAVAEADVVLMLIDARAGVTPLDAHFADYLRKQKTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE G ES LG G+P+ SAE G G+ EL++ALRP E +D
Sbjct: 119 NKCEGKAGAPGMY-----ESYGLGLGEPVPFSAEHGEGLAELFDALRPHAEAAGALDFDD 173
Query: 302 SCTQNNSSTQDVTSPE---DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + V E +D + PLQL IVGRPNVGKSTL+N LL +DR+L GPEAGL
Sbjct: 174 DEEDDFFAADPVDDEEIETEDRPERPLQLVIVGRPNVGKSTLVNRLLGQDRMLTGPEAGL 233
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V ++++ R + LVDTAG +R + P LS + + + A VV LV+D+
Sbjct: 234 TRDAISVDWQHRDRGIRLVDTAGLRKRANIEDPVEKLSASNTLEAIRMAEVVVLVMDSAA 293
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VEEGR LV+ +NK D + Q + + + ++T +P V G+
Sbjct: 294 ILDKQDLTIARMVVEEGRSLVIAINKWDAVEKPQEAL------QRLADRLETSLPMVRGL 347
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
P V SAL GRG +M V+ ++ W R+PTS+LNRWL V+ H A P
Sbjct: 348 PTVTISALTGRGVDKMMDAVLAVHKTWNRRIPTSQLNRWLEDVLSHHP---PPAMPGGRR 404
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI+Y TQ+KARPPTFV F S + L ++ R+L L+E+F + G+P+R+ R
Sbjct: 405 LKIRYMTQIKARPPTFVIFASKPEQLPESYSRYLINGLRENFKMAGVPMRLYVR 458
>gi|389691042|ref|ZP_10179935.1| ribosome-associated GTPase EngA [Microvirga sp. WSM3557]
gi|388589285|gb|EIM29574.1| ribosome-associated GTPase EngA [Microvirga sp. WSM3557]
Length = 448
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 276/468 (58%), Gaps = 47/468 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKLGDL F+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGEAKLGDLEFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+L R T +A +F++D R+G+ P D + +R+ KP++ +
Sbjct: 62 -EATEESLLGRMRAQTEAAIADADVILFVVDARAGILPADRPFAEMVRRSG---KPVILI 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A ++ LG GDP+ +SAE G GM +L+E+L P D
Sbjct: 118 ANKAEG-----GSGMAGAYDAFSLGLGDPVPLSAEHGEGMADLFESLMPYFPD------- 165
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D+ EDD +K PLQ+AIVGRPN GKSTL+N ++ E+R+L GPEAG+TR
Sbjct: 166 ---------PNDMEDEEDDPNK-PLQVAIVGRPNAGKSTLINRMVGEERLLTGPEAGITR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ + +E++GR + L DTAG +R + E LSV + + + A VV ++LDA
Sbjct: 216 DSISLDWEWRGRPIKLFDTAGLRKRARVEDKLEKLSVADALRAVRFAEVVVVLLDATIPF 275
Query: 416 --EEVRAV----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++ V +EGR LV+ +NK DL++ +Q L K +KE + ++PQV G PV
Sbjct: 276 EKQDLSIVDLVEQEGRALVIGLNKWDLVADQQ--GLLKDLKEKATR----LLPQVRGAPV 329
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M V Y+KW R+PT++LN+WL + + + S + KI+Y
Sbjct: 330 VPLSGLAGSGIDPLMKAVFQVYEKWNTRIPTAKLNQWLSEALEANPPPAVSGRRIKIRYM 389
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQVK+RPP F F + L + R+L L+E FDL G PIR++ R
Sbjct: 390 TQVKSRPPHFAVFGNQLDALPKSYTRYLVNGLREAFDLPGTPIRVSLR 437
>gi|260753034|ref|YP_003225927.1| GTP-binding protein EngA [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552397|gb|ACV75343.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 454
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/472 (40%), Positives = 276/472 (58%), Gaps = 38/472 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+L + F+V+D+AG
Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDAELIGMPFRVIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + S+ R T + + A+F+ID R G+ PLD E+ +WLR KPI+
Sbjct: 59 FEDEDPA-SLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRALG---KPII 114
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NKCE +G L E+ LGFG+P+ SAE G G+ L++ALRP VE
Sbjct: 115 VLANKCEGKGGESGLL-----EAYSLGFGEPLPFSAEHGEGLVGLFQALRPFVE------ 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
DS +N SS + ++E L PLQLAIVGRPN GKSTL+N L+ DR++ GPEAG
Sbjct: 164 -GDSLEENTSSEDEDEEKSEEEIDLSPLQLAIVGRPNAGKSTLINRLIGVDRMITGPEAG 222
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAE 416
+TRDS+ + + +QGR V L+DTAG ++ + LSVM + + + A VV L+LD
Sbjct: 223 ITRDSIAIDWSWQGRPVRLIDTAGLRKKARVVDKMERLSVMDTFRTIDYAEVVVLLLDGT 282
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EEGR L++ +NK D++ SA + ++E + + QV G
Sbjct: 283 QGLEGQDLRIADRVLEEGRSLIIAINKWDMVE--NPSAFLQAIREG----LNDGLAQVKG 336
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SAL GRG ++ +T + W R+ T +LNRWL + + H+ + K+
Sbjct: 337 VPLITISALTGRGVDPLLKAAFETRKAWSRRVSTGQLNRWLTRAIAHHAPPAPGGKRIKL 396
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQ+K RPPTFV F + L + R+L SL+ D D G +PIR+ RS
Sbjct: 397 RYLTQIKTRPPTFVLFGTRVDQLPTSYERYLINSLRSDLDFGSVPIRLHFRS 448
>gi|159490690|ref|XP_001703306.1| hypothetical protein CHLREDRAFT_114154 [Chlamydomonas reinhardtii]
gi|158280230|gb|EDP05988.1| predicted protein [Chlamydomonas reinhardtii]
Length = 450
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 272/466 (58%), Gaps = 34/466 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE- 181
V ++GRPNVGKSALFNRLIRRR+ALVY+TP HVTRD +EG A+LGDL F+V D++GLE
Sbjct: 1 VALVGRPNVGKSALFNRLIRRRQALVYDTPASHVTRDYQEGRAQLGDLVFRVADTSGLEP 60
Query: 182 -TEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
T A +G+I + R +L+++ A+ ++D ++G+ P D E+ +WLR+H P + +V
Sbjct: 61 RTAAAAGTIQVQRV-----RLLSQSHLALMVVDAKTGVLPADEELAEWLRRHVPAGRVMV 115
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E + + LGFG+P+A+SA TG G+ +L+ AL+P L
Sbjct: 116 VANKAEG-GRAQEEMPQTVYDCYRLGFGEPMAVSASTGEGLADLFAALQPP--------L 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + ++ +D + ++LAI+G PN GKSTLLNALL E R + GPE GLT
Sbjct: 167 DAASDSDDEEEEDEEDAKPAGGLGVMKLAIMGLPNAGKSTLLNALLGEQRAVTGPEPGLT 226
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
RDSVR + Y V LVDTAGW+ R +G A++S + +L + HVV LVLDAE
Sbjct: 227 RDSVRAAWTYGDTAVELVDTAGWVMRRNWRGVAAMSRRAALTSLAQVHVVLLVLDAERAL 286
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A + EG+ LVV+ NK D+LS Q A K A+ + + +PV
Sbjct: 287 ASDRVSLAGTVLREGKALVVVANKADVLSVAQRRAFTK----ALQRHLGERFLDAGELPV 342
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKY 527
V SA G G VM + Y W R+ T+RLNR+++K+ R + D++ + ++KY
Sbjct: 343 VEVSARAGTGLDDVMPTALAAYTAWNKRVSTARLNRFMQKLQLRMVGTGLDRTLE-RVKY 401
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ+KARPPTF AF++G + FL L+E G+P+R+
Sbjct: 402 LTQLKARPPTFTAFMAGSTPVGREFGVFLAAQLREVLGFQGVPLRV 447
>gi|83310443|ref|YP_420707.1| GTP-binding protein EngA [Magnetospirillum magneticum AMB-1]
gi|123542640|sp|Q2W7M7.1|DER_MAGSA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|82945284|dbj|BAE50148.1| GTP-binding protein engA [Magnetospirillum magneticum AMB-1]
Length = 464
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 197/475 (41%), Positives = 275/475 (57%), Gaps = 43/475 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R A+V++ P VTRD REG A L + F+V+D+AG E
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLAIVHDLPG--VTRDRREGRASLLGMEFQVVDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ SI R T +A+ A+ +ID R+G+ PLD LR+ + I+
Sbjct: 62 DDGGD-SIEARMRHQTDMAVAEADVALLLIDSRAGVTPLDRHFADHLRRLPTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR---V 298
NKCE G ES LG G+P+A+SAE G GM EL+EALR D+ ++ +
Sbjct: 119 NKCEGKAGAPGLY-----ESYGLGMGEPVAVSAEHGEGMYELFEALR----DHAIKAGAL 169
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + E D ++ PL +AIVGRPNVGKSTL N LL +DR+L GPEAGL
Sbjct: 170 TPEGDDPEPEEPAEGEDGEPDPTR-PLTMAIVGRPNVGKSTLGNQLLGQDRLLTGPEAGL 228
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V +E++GR + LVDTAG ++ + LSV + + + + VV LV+DA
Sbjct: 229 TRDAIAVEWEHRGRRMKLVDTAGLRKKAQIYDAIEKLSVGNTIETIRMSEVVVLVMDAAA 288
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VEEGR LV+ +NK D++ Q + KR+K+ ++T +PQ G+
Sbjct: 289 ILDKQDLTIARLVVEEGRALVLAINKWDVVDDPQTA--LKRLKD----RLETSLPQARGV 342
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
V SAL GRG +M V+DT+ KW R+PT++LNRWL ++ RH A P
Sbjct: 343 ATVTLSALTGRGIEKLMDAVLDTWTKWNRRIPTAQLNRWLEDMIERHP---PPALPGGRR 399
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ KARPPTFV F + + L ++ R+L L+E FDL G+P+R+ R
Sbjct: 400 YKIRYMTQAKARPPTFVLFATRPEQLPESYSRYLVNGLREAFDLPGVPVRLYVRG 454
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N L+ + +V G+TRD G +VDTAG+
Sbjct: 1 MPFTVAIIGRPNVGKSTLFNRLVGKRLAIVHDLPGVTRDRREGRASLLGMEFQVVDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHV-VALVL 413
E + G + + M+ + ++ A VAL+L
Sbjct: 61 ---EDDGGDSIEARMRHQTDMAVAEADVALLL 89
>gi|384411906|ref|YP_005621271.1| ribosome-associated GTPase EngA [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|335932280|gb|AEH62820.1| ribosome-associated GTPase EngA [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 454
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 192/472 (40%), Positives = 276/472 (58%), Gaps = 38/472 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+L + F+V+D+AG
Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDAELIGMPFRVIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + S+ R T + + A+F+ID R G+ PLD E+ +WLR KPI+
Sbjct: 59 FEDEDPA-SLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRALG---KPII 114
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NKCE +G L E+ LGFG+P+ SAE G G+ L++ALRP VE Y
Sbjct: 115 VLANKCEGKGGESGLL-----EAYSLGFGEPLPFSAEHGEGLVGLFQALRPFVEGY---- 165
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
S ++ SS + ++E L PLQLAIVGRPN GKSTL+N L+ DR++ GPEAG
Sbjct: 166 ---SLEEDTSSEDEDEEKSEEEIDLSPLQLAIVGRPNAGKSTLINRLIGVDRMITGPEAG 222
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAE 416
+TRDS+ + + +QGR V L+DTAG ++ + LSVM + + + A VV L+LD
Sbjct: 223 ITRDSIAIDWSWQGRPVRLIDTAGLRKKARVVDKMERLSVMDTFRTIDYAEVVVLLLDGT 282
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EEGR L++ +NK D++ SA + ++E + + QV G
Sbjct: 283 QGLEGQDLRIADRVLEEGRSLIIAINKWDMVE--NPSAFLQAIREG----LNDGLAQVKG 336
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SAL GRG ++ +T + W R+ T +LNRWL + + H+ + K+
Sbjct: 337 VPLITISALTGRGVDPLLKAAFETRKAWSHRVSTGQLNRWLTRAIAHHAPPAPGGKRIKL 396
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQ+K RPPTFV F + L + R+L SL+ D D G +PIR+ RS
Sbjct: 397 RYLTQIKTRPPTFVLFGTRVDQLPTSYERYLINSLRSDLDFGSVPIRLHFRS 448
>gi|449522476|ref|XP_004168252.1| PREDICTED: GTPase Der-like, partial [Cucumis sativus]
Length = 297
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/238 (63%), Positives = 184/238 (77%), Gaps = 4/238 (1%)
Query: 67 LLP----EVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPT 122
LLP + RG+CGV +N E + DG V +KV+ + VDF KI IN+LPT
Sbjct: 60 LLPLAAVHIARGYCGVPENGLPEKRLNDSASDGKVVANKVQGVQRNSVDFKKIPINMLPT 119
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+++GRPNVGKSALFNR I+RREALVYNTPDDHVTRDIREG+AKLGDLRF VLDS+GLET
Sbjct: 120 VVLVGRPNVGKSALFNRFIKRREALVYNTPDDHVTRDIREGVAKLGDLRFVVLDSSGLET 179
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
A+SGSIL+RTA MT NVL K+Q AIF+ID R+GLHP DLEVGKWLR+HAP I +VAMN
Sbjct: 180 TASSGSILERTAKMTENVLLKSQLAIFLIDARAGLHPFDLEVGKWLRRHAPNINLVVAMN 239
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
K ESL + + +L A E+ LGFGDP+ ISAETGLGM ELY A++P +E YML+V++
Sbjct: 240 KSESLFDNSCTLLAAGLEAQRLGFGDPVPISAETGLGMQELYGAIKPVLEKYMLKVIS 297
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 299 LNDSCTQNN---SSTQDVTSPEDDESKLPLQL----AIVGRPNVGKSTLLNALLQEDRVL 351
LNDS + + Q V D K+P+ + +VGRPNVGKS L N ++ L
Sbjct: 85 LNDSASDGKVVANKVQGVQRNSVDFKKIPINMLPTVVLVGRPNVGKSALFNRFIKRREAL 144
Query: 352 V--GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKN-LMRAHV 408
V P+ +TRD +R G ++V + L+ G + +N L+++ +
Sbjct: 145 VYNTPDDHVTRD-IREGVAKLGDLRFVVLDSSGLETTASSGSILERTAKMTENVLLKSQL 203
Query: 409 VALVLDA 415
++DA
Sbjct: 204 AIFLIDA 210
>gi|85716391|ref|ZP_01047363.1| GTP-binding protein EngA [Nitrobacter sp. Nb-311A]
gi|85696748|gb|EAQ34634.1| GTP-binding protein EngA [Nitrobacter sp. Nb-311A]
Length = 458
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 195/468 (41%), Positives = 266/468 (56%), Gaps = 40/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+LGDL F V+D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQRLALVDDEP--GVTRDRREGQARLGDLDFTVIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPRGSLTARMQEQTETAIAAADALMFVFDARAGLTPTDRSFADFARRAD---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G+L ES LG GDPI +SAE G GM +LY+ALR V+
Sbjct: 118 ANKSEGRHGDAGAL-----ESYALGLGDPIGVSAEHGEGMGDLYDALRA--------VMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + ++ D +D S+ P+++AIVGRPN GKST++N LL EDR+L PEAG TR
Sbjct: 165 EPAEEADA--DDSIESGEDVSRRPIRVAIVGRPNAGKSTVINYLLNEDRLLTSPEAGTTR 222
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++ GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 223 DSISVELDWHGRDFRIFDTAGLRRRSRIEEKLEKLSVADTLRAVRFAEVVVLMMDAQNRF 282
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ G SA ++ + +PQV G PV
Sbjct: 283 EEQDLRIADLIEREGRALVIAVNKWDLMQG--GSARIASLR----NDADHWLPQVKGAPV 336
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + Y W R+PT+ LNRW ++ + S + K+ Y
Sbjct: 337 VALSGLTGEGVGGLMTAIQAAYAVWNRRVPTAALNRWFQQAIAASPPPAVSGRRLKLNYA 396
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+E FDL G PIRIT R
Sbjct: 397 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRETFDLPGTPIRITLR 444
>gi|56551349|ref|YP_162188.1| GTP-binding protein EngA [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542923|gb|AAV89077.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 454
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/472 (40%), Positives = 276/472 (58%), Gaps = 38/472 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+L + F+V+D+AG
Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDAELIGMPFRVIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + S+ R T + + A+F+ID R G+ PLD E+ +WLR KPI+
Sbjct: 59 FEDEDPA-SLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRALG---KPII 114
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NKCE +G L E+ LGFG+P+ SAE G G+ L++ALRP VE
Sbjct: 115 VLANKCEGKGGESGLL-----EAYSLGFGEPLPFSAEHGEGLVGLFQALRPFVE------ 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D+ ++ SS + ++E L PLQLAIVGRPN GKSTL+N L+ DR++ GPEAG
Sbjct: 164 -GDALEEDTSSEDEDEEKSEEEIDLSPLQLAIVGRPNAGKSTLINRLIGVDRMITGPEAG 222
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAE 416
+TRDS+ + + +QGR V L+DTAG ++ + LSVM + + + A VV L+LD
Sbjct: 223 ITRDSIAIDWSWQGRPVRLIDTAGLRKKARVVDKMERLSVMDTFRTIDYAEVVVLLLDGT 282
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EEGR L++ +NK D++ SA + ++E + + QV G
Sbjct: 283 QGLEGQDLRIADRVLEEGRSLIIAINKWDMVE--NPSAFLQAIREG----LNDGLAQVKG 336
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SAL GRG ++ +T + W R+ T +LNRWL + + H+ + K+
Sbjct: 337 VPLITISALTGRGVDPLLKAAFETRKAWSRRVSTGQLNRWLTRAIAHHAPPAPGGKRIKL 396
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQ+K RPPTFV F + L + R+L SL+ D D G +PIR+ RS
Sbjct: 397 RYLTQIKTRPPTFVLFGTRVDQLPTSYERYLINSLRSDLDFGSVPIRLHFRS 448
>gi|148255174|ref|YP_001239759.1| GTP-binding protein EngA [Bradyrhizobium sp. BTAi1]
gi|166224309|sp|A5EI59.1|DER_BRASB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146407347|gb|ABQ35853.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
BTAi1]
Length = 456
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/470 (40%), Positives = 272/470 (57%), Gaps = 46/470 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKLGDL+F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLGDLQFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
GS+ R T +A F+ID R+GL P D + R+ KP++ +
Sbjct: 62 G-GPKGSLTARMQEQTETAIALADALFFVIDARAGLTPADRTFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+ALR V +
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDALRGLVPE------- 165
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T++ + T +++ + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 166 ---TEDEVDEHEET--DEERAARPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V EY+GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 221 DSIAVEIEYKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ + Q SAL ++ +PQV+G+
Sbjct: 281 EEQDLRIADLIEREGRALVIAVNKWDLMESKPGQISALR--------HDVDHWLPQVSGV 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M ++++Y W R+PT+ LNRW + + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVESYAVWNRRVPTAALNRWFEEAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLINSMRETFELPGTPVRITLR 442
>gi|162136030|ref|YP_532152.2| GTP-binding protein EngA [Rhodopseudomonas palustris BisB18]
Length = 460
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 191/482 (39%), Positives = 275/482 (57%), Gaps = 38/482 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG KLGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGQGKLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS++ R T +A +F+ID R+GL P D + R+ KP++ +
Sbjct: 62 -EGAKGSLVARMQEQTEAAIALADALMFVIDARAGLTPNDRAFADFARRAN---KPVILV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G G+++LY+ALR + +
Sbjct: 118 ANKSEGRHGEIGAM-----ESYALGLGDPIQISAEHGEGLSDLYDALRAVMPE------P 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + + V+ E+D S P+++AIVGRPN GKST++N LL E+R+L EAG TR
Sbjct: 167 DVLFDEDDDVEGVS--EEDFSTRPIRVAIVGRPNAGKSTMINHLLGEERLLTSAEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +Y+GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 225 DSISVEVDYKGRQFRIFDTAGLRRRSRIEEKLEKLSVADALRAIRFAEVVVLMMDSQNKF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ G+Q S + + ++ ++PQV G+P+
Sbjct: 285 EEQDLRIADLIEREGRALVIAVNKWDLM-GKQASLV-----AGLRADVDHLLPQVKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D+Y W R+PT+ LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGIDRLMKAIEDSYAVWNRRVPTASLNRWFEQAVETNPPPAVSGRRLKLNYV 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSR 588
TQ KARPP+F+ F S + ++ LR+L SL+ FDL G P+RIT R R
Sbjct: 399 TQAKARPPSFIVFCSRADAVPESYLRYLVNSLRAFFDLPGTPVRITLREKANPFAHKRRR 458
Query: 589 QN 590
N
Sbjct: 459 PN 460
>gi|83594414|ref|YP_428166.1| GTP-binding protein EngA [Rhodospirillum rubrum ATCC 11170]
gi|386351172|ref|YP_006049420.1| GTP-binding protein EngA [Rhodospirillum rubrum F11]
gi|83577328|gb|ABC23879.1| Small GTP-binding protein domain [Rhodospirillum rubrum ATCC 11170]
gi|346719608|gb|AEO49623.1| GTP-binding protein EngA [Rhodospirillum rubrum F11]
Length = 500
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 198/506 (39%), Positives = 278/506 (54%), Gaps = 66/506 (13%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL RR A+V++ P VTRD REG A L DL F+V+D+AGLE
Sbjct: 3 TVAIIGRPNVGKSTLFNRLCGRRLAIVHDMPG--VTRDRREGKASLADLVFRVVDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + R T L++ A+ +ID R+G+ PLD + LRK AP I I+
Sbjct: 61 -EAGPEVLEGRMRQQTDRALSEAHVALMLIDSRAGVTPLDAHFAEILRK-AP-IPVILVA 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE G+ ES +G GDP+ +SAE G G++ LYEAL P + +M + D
Sbjct: 118 NKCEG-----GAGKPGFYESYSMGLGDPVPLSAEHGEGLSLLYEALMPIYDAHMAQEAKD 172
Query: 302 SC---------TQNNSSTQ---DVTSPEDDE-------------------------SKLP 324
T+ S+ + D S E DE + P
Sbjct: 173 EADAVRAAFLETEAASAAKPYIDFASLEPDEVPEDDDSDPSQDPEDDFSVEAFDPRGERP 232
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
+Q+AI+GRPN GKSTL+N L+ +DR++ GPEAG+TRD++ V +E+ GR LVDTAG +
Sbjct: 233 IQMAIIGRPNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGRRFRLVDTAGLRR 292
Query: 385 REK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVR----------AVEEGRGLVVIVNK 433
+ + E L V + + A V L+LDA V ++EGR LV+ VNK
Sbjct: 293 KARVENSLEKLMVADTLNAIRLAEVCVLMLDANMVMDRQDLTIARLVIDEGRALVIAVNK 352
Query: 434 MDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQK 493
D + R+ +AL + + ++T + QV G+P V SALEG G +M ++ + K
Sbjct: 353 WDACADRK-AALQR-----LADRLETSLAQVRGVPFVTLSALEGHGLNRLMDAALEAHAK 406
Query: 494 WCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDA 551
W R+PTSR NRWL+ ++ RH + +I+Y TQ K RPPTF F++ L ++
Sbjct: 407 WNRRVPTSRFNRWLKGMIDRHPLPMGKHGRRLRIRYGTQAKIRPPTFALFMTRPDDLPES 466
Query: 552 ELRFLTKSLKEDFDLGGIPIRITQRS 577
+R+L L+EDFD+ G PIR+ R+
Sbjct: 467 YVRYLNSGLREDFDMAGTPIRLLFRA 492
>gi|90105796|gb|ABD87833.1| Small GTP-binding protein domain [Rhodopseudomonas palustris
BisB18]
Length = 465
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 191/482 (39%), Positives = 275/482 (57%), Gaps = 38/482 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG KLGDL F ++D+AGL+
Sbjct: 9 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGQGKLGDLEFTIIDTAGLD 66
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS++ R T +A +F+ID R+GL P D + R+ KP++ +
Sbjct: 67 -EGAKGSLVARMQEQTEAAIALADALMFVIDARAGLTPNDRAFADFARRAN---KPVILV 122
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G G+++LY+ALR + +
Sbjct: 123 ANKSEGRHGEIGAM-----ESYALGLGDPIQISAEHGEGLSDLYDALRAVMPE------P 171
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + + V+ E+D S P+++AIVGRPN GKST++N LL E+R+L EAG TR
Sbjct: 172 DVLFDEDDDVEGVS--EEDFSTRPIRVAIVGRPNAGKSTMINHLLGEERLLTSAEAGTTR 229
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +Y+GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 230 DSISVEVDYKGRQFRIFDTAGLRRRSRIEEKLEKLSVADALRAIRFAEVVVLMMDSQNKF 289
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ G+Q S + + ++ ++PQV G+P+
Sbjct: 290 EEQDLRIADLIEREGRALVIAVNKWDLM-GKQASLV-----AGLRADVDHLLPQVKGVPI 343
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D+Y W R+PT+ LNRW + + + S + K+ Y
Sbjct: 344 VAVSGLMGEGIDRLMKAIEDSYAVWNRRVPTASLNRWFEQAVETNPPPAVSGRRLKLNYV 403
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSR 588
TQ KARPP+F+ F S + ++ LR+L SL+ FDL G P+RIT R R
Sbjct: 404 TQAKARPPSFIVFCSRADAVPESYLRYLVNSLRAFFDLPGTPVRITLREKANPFAHKRRR 463
Query: 589 QN 590
N
Sbjct: 464 PN 465
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 321 SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTA 380
S + AI+GRPNVGKSTL N L+ + LV G+TRD + ++DTA
Sbjct: 4 SAMSFTFAIIGRPNVGKSTLFNRLVGQKLALVDDTPGVTRDRREGQGKLGDLEFTIIDTA 63
Query: 381 GWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
G + K A + Q+ + A + V+DA
Sbjct: 64 GLDEGAKGSLVARMQ-EQTEAAIALADALMFVIDA 97
>gi|397676685|ref|YP_006518223.1| GTP-binding protein engA [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395397374|gb|AFN56701.1| GTP-binding protein engA [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 454
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/472 (40%), Positives = 274/472 (58%), Gaps = 38/472 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+L + F+V+D+AG
Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDAELIGMPFRVIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + S+ R T + + A+F+ID R G+ PLD E+ WLR KPI+
Sbjct: 59 FEDEDPA-SLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIALWLRALG---KPII 114
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NKCE +G L E+ LGFG+P+ SAE G G+ L++ALRP VE
Sbjct: 115 VLANKCEGKGGESGLL-----EAYSLGFGEPLPFSAEHGEGLVGLFQALRPFVE------ 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D+ + SS + ++E L PLQLAIVGRPN GKSTL+N L+ DR++ GPEAG
Sbjct: 164 -GDAVEEVASSEDEDEEKSEEEIDLSPLQLAIVGRPNAGKSTLINRLIGVDRMITGPEAG 222
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAE 416
+TRDS+ + + +QGR V L+DTAG ++ + LSVM + + + A VV L+LD
Sbjct: 223 ITRDSIAIDWSWQGRPVRLIDTAGLRKKARVVDKMERLSVMDTFRTIDYAEVVVLLLDGT 282
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EEGR L++ +NK D++ SA + ++E + + QV G
Sbjct: 283 QGLEGQDLRIADRVLEEGRSLIIAINKWDMVE--NPSAFLQAIREG----LNDGLAQVKG 336
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SAL GRG ++ +T + W R+ T +LNRWL + + H+ + K+
Sbjct: 337 VPLITISALTGRGVDPLLKAAFETRKAWSRRVSTGQLNRWLTRAIAHHAPPAPGGKRIKL 396
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQ+K RPPTFV F + L + R+L SL+ D D G +PIR+ RS
Sbjct: 397 RYLTQIKTRPPTFVLFGTRVDQLPTSYERYLINSLRSDLDFGSVPIRLHFRS 448
>gi|374331051|ref|YP_005081235.1| GTP-binding protein EngA [Pseudovibrio sp. FO-BEG1]
gi|359343839|gb|AEV37213.1| GTP-binding protein EngA [Pseudovibrio sp. FO-BEG1]
Length = 468
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 279/474 (58%), Gaps = 33/474 (6%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF+++D+A
Sbjct: 1 MTATVAIIGRPNVGKSTLFNRLVGKRLALVDDTPG--VTRDRRSGDARLGDLRFRIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE EA + S+ R T + + +F+ID R+GL PLD LR+++ + I
Sbjct: 59 GLE-EAEASSLEGRMRAQTEEAIREADACLFLIDARAGLMPLDEHFANLLRRNSTPV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G ++ LGFGDPIA+SAE G G++ELY+ LRP V++
Sbjct: 116 LCANKAEGKAGDVGLY-----DAFTLGFGDPIALSAEHGEGLSELYDMLRPIVDEAEELE 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDE----SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ T+ + DV E DE + PL++AIVGRPN GKSTL+N +L E+R+L GP
Sbjct: 171 ASQEFTEARTDV-DVEDEEIDEPVGTRERPLRMAIVGRPNAGKSTLINQMLGEERLLTGP 229
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRDS+ V +E+Q V + DTAG ++ + ++ LSV + + + A VV + L
Sbjct: 230 EAGITRDSISVEWEWQDHHVKVFDTAGIRKKARVQEKLEKLSVADALRAVKFAEVVVVTL 289
Query: 414 DA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA ++++ ++ EGR +V+ VNK DL+ R+++ + +K++ + + Q
Sbjct: 290 DATISFEKQDLQIIDLCAREGRAIVIAVNKWDLIEDREDA--WGHIKDSQ----ERYLNQ 343
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ G+ +V S + G+G +M V Y+ W R+ TS LNRWL V+ H S +
Sbjct: 344 LRGVEIVTMSGINGQGLDKLMQAVFRAYEMWNKRIGTSSLNRWLEGVLIHHPPPAVSGRR 403
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++++ TQ K RPP FV F S L ++ R+L ++E FD+ G P+R++ R
Sbjct: 404 VRLRFMTQPKTRPPHFVVFSSKPDNLPESYTRYLVNGIRERFDIKGTPVRLSYR 457
>gi|254473321|ref|ZP_05086718.1| GTP-binding protein EngA [Pseudovibrio sp. JE062]
gi|211957437|gb|EEA92640.1| GTP-binding protein EngA [Pseudovibrio sp. JE062]
Length = 468
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 279/474 (58%), Gaps = 33/474 (6%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF+++D+A
Sbjct: 1 MTATVAIIGRPNVGKSTLFNRLVGKRLALVDDTPG--VTRDRRSGDARLGDLRFRIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE EA + S+ R T + + +F+ID R+GL PLD LR+++ + I
Sbjct: 59 GLE-EAEASSLEGRMRAQTEEAIREADACLFLIDARAGLMPLDEHFANLLRRNSTPV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G ++ LGFGDPIA+SAE G G++ELY+ LRP V++
Sbjct: 116 LCANKAEGKAGDVGLY-----DAFTLGFGDPIALSAEHGEGLSELYDMLRPIVDEADELE 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDE----SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ T+ + DV E DE + PL++AIVGRPN GKSTL+N +L E+R+L GP
Sbjct: 171 ASQEFTEARTDV-DVEDEEIDEPVGTRERPLRMAIVGRPNAGKSTLINQMLGEERLLTGP 229
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRDS+ V +E+Q V + DTAG ++ + ++ LSV + + + A VV + L
Sbjct: 230 EAGITRDSISVEWEWQDHHVKVFDTAGIRKKARVQEKLEKLSVADALRAVKFAEVVVVTL 289
Query: 414 DA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA ++++ ++ EGR +V+ VNK DL+ R+++ + +K++ + + Q
Sbjct: 290 DATISFEKQDLQIIDLCAREGRAIVIAVNKWDLIEDREDA--WGHIKDSQ----ERYLNQ 343
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ G+ +V S + G+G +M V Y+ W R+ TS LNRWL V+ H S +
Sbjct: 344 LRGVEIVTMSGINGQGLDKLMQAVFRAYEMWNKRIGTSSLNRWLEGVLIHHPPPAVSGRR 403
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++++ TQ K RPP FV F S L ++ R+L ++E FD+ G P+R++ R
Sbjct: 404 VRLRFMTQPKTRPPHFVVFSSKPDNLPESYTRYLVNGIRERFDIKGTPVRLSYR 457
>gi|452966982|gb|EME71989.1| GTP-binding protein Der [Magnetospirillum sp. SO-1]
Length = 464
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/475 (40%), Positives = 273/475 (57%), Gaps = 43/475 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ +R A+V++ P VTRD REG A L + F+V+D+AG E
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKRLAIVHDLPG--VTRDRREGRASLLGMDFQVVDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ S+ R T +++ A+ +ID R+G+ PLD LR+ + I+
Sbjct: 62 DDGGD-SVEARMRRQTDMAVSEADVALLLIDARAGVTPLDRHFADHLRRLPTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR---V 298
NKCE G ES LG G+P+ +SAE G GM EL+EALR D+ ++ +
Sbjct: 119 NKCEGKAGAPGLY-----ESYGLGMGEPVPVSAEHGEGMYELFEALR----DHAIKAGAL 169
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D + E D ++ PL +AIVGRPNVGKSTL N LL +DR+L GPEAGL
Sbjct: 170 TADGDDPEPEEPAEGEDGEPDPTR-PLTMAIVGRPNVGKSTLGNQLLGQDRLLTGPEAGL 228
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V +E++GR V LVDTAG ++ + LSV + + + + VV LV+DA
Sbjct: 229 TRDAIAVEWEHRGRRVKLVDTAGLRKKAQIYDAIEKLSVGNTIETIRMSEVVVLVMDAAA 288
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VEEGR LV+ +NK D++ Q + KR+K+ ++T +PQ G+
Sbjct: 289 ILDKQDLTIARLVVEEGRALVIAINKWDVVDDPQTA--LKRLKD----RLETSLPQAKGV 342
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
V SAL GRG +M V+DT+ W R+PT++LNRWL ++ RH A P
Sbjct: 343 ATVTLSALTGRGIERLMDAVLDTWTLWNRRIPTAQLNRWLEDMIERHP---PPALPGGRR 399
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ KARPPTFV F + + L ++ R+L L+E F++ G+PIR+ R
Sbjct: 400 YKIRYMTQAKARPPTFVLFATRPEQLPESYSRYLVNGLREAFEMPGVPIRLYVRG 454
>gi|254460403|ref|ZP_05073819.1| GTP-binding protein [Rhodobacterales bacterium HTCC2083]
gi|206676992|gb|EDZ41479.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2083]
Length = 490
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 195/508 (38%), Positives = 284/508 (55%), Gaps = 55/508 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGDARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R+G+ P D + LRK + + I+A
Sbjct: 62 -EATDESLQGRMRRLTERAVDMADICLFMIDARAGVTPADQVFAEILRKRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK G GS A A E+ LG G+PI +SAE G G+ +LY L P + + R L+
Sbjct: 119 NK------GEGSAADAGVIEAYSLGLGEPIRLSAEHGEGLNDLYTQLMPLADGFAERALD 172
Query: 301 DSCTQNNSSTQDVTSPEDDE-----------SKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ DV EDDE +K P+Q+A+VGRPN GKSTL+N ++ EDR
Sbjct: 173 ------QAPETDVALDEDDEWDENRPFEMPTAKKPMQIAVVGRPNAGKSTLINMIMGEDR 226
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
+L GPEAG+TRD++ + E+ G + + DTAG ++ K + LSV + + A V
Sbjct: 227 LLTGPEAGITRDAISLRSEWNGTHIRIFDTAGMRKKAKVQDKLEKLSVSDGLRAVKFAEV 286
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V ++LDA +++R A EGR ++V VNK D+ +QN + ++E+ +
Sbjct: 287 VVVLLDAAIPFEQQDLRIADLAEREGRAVIVAVNKWDIEDDKQNK--LRDLRES----FE 340
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
++PQ+ G P+V SA GRG + ++ Y+ W R+PT+ LNRWL ++ H
Sbjct: 341 RLLPQLRGAPLVTVSAKTGRGLDRLHDAILSAYKTWNTRVPTAALNRWLAGMVEAHPPPA 400
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ + K++Y TQ K RPP FV S + +S++ R+L L+ DFD+ G PIR+ RS
Sbjct: 401 PAGKRIKLRYMTQAKTRPPGFVVMCSLPEKMSESYSRYLVNGLRTDFDMPGTPIRLYMRS 460
Query: 578 VP--------RKCGSSSSRQNTGQKVGR 597
+K G S R++ V R
Sbjct: 461 QNDSNPFKGRKKAGPSKLRKHLKSNVER 488
>gi|92117234|ref|YP_576963.1| GTP-binding protein EngA [Nitrobacter hamburgensis X14]
gi|122418012|sp|Q1QMP4.1|DER_NITHX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91800128|gb|ABE62503.1| Small GTP-binding protein domain [Nitrobacter hamburgensis X14]
Length = 460
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 269/468 (57%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F V+D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDKP--GVTRDRREGQARLGDLDFTVIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPRGSLTARMQEQTETAIAAADALMFVFDARAGLTPTDRSFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G+L ES LG GDP+ +SAE G GM++LY+ALR V+
Sbjct: 118 ANKSEGRHGEAGAL-----ESYALGLGDPVGVSAEHGEGMSDLYDALRG--------VMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + D +D S+ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPTEEAEEFDDDDIIESEDISQRPIRVAIVGRPNAGKSTLINYLLGEERLLTSPEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +QGR + DTAG +R + E+ LSV + + A VV L++DA
Sbjct: 225 DSISVELNWQGRDFRIFDTAGLRRRSRIEEKLEKLSVADTLRAARFAEVVVLMMDAQNRF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ GRQ+S + A+ + ++PQV G+P+
Sbjct: 285 EEQDLRIADLIEREGRALVIAVNKWDLM-GRQSSLI-----AALRTDADHLLPQVKGMPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+PT+ LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGVDRLMTAIQDAYAIWNRRVPTAALNRWFEQAVDANPPPAVSGRRLKLNYV 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+F+ F S + ++ LR+L SL+ FDL G PIRIT R
Sbjct: 399 TQAKARPPSFIVFCSRADAVPESYLRYLVNSLRGFFDLPGTPIRITLR 446
>gi|392382768|ref|YP_005031965.1| ribosome-associated GTPase [Azospirillum brasilense Sp245]
gi|356877733|emb|CCC98579.1| ribosome-associated GTPase [Azospirillum brasilense Sp245]
Length = 467
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/471 (40%), Positives = 271/471 (57%), Gaps = 32/471 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV ++GRPNVGKS LFNRL ++ ALV +TP VTRD R A++G L F V+D+AGLE
Sbjct: 4 TVALVGRPNVGKSTLFNRLAGKKLALVDDTP--GVTRDWRSAPARVGGLSFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R T L + A+F++D R+G+ PLD LRK + I+
Sbjct: 62 -DVTDDSLEARMRRQTERALERADVALFIVDARTGITPLDRHFAALLRKSKTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E TG E+ LG GDP+A+SAE G GM +L EAL P V
Sbjct: 119 NKAEGKVGMTGLY-----EAFELGLGDPLALSAEHGEGMADLVEALLPYAPPEPEAVEKA 173
Query: 302 SCTQNNSSTQDV---TSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ +++ PE DE + P+Q+AIVGRPNVGKSTLLNAL+ E+RVL GPEAG
Sbjct: 174 AVPAKGEGEEELPVGDQPETDEERARPIQIAIVGRPNVGKSTLLNALIGEERVLTGPEAG 233
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+TRD++ V +E++GR LVDTAG +R + + L+V + + + A VV LV+DA
Sbjct: 234 MTRDAISVDWEWRGRKFRLVDTAGMRRRARVDAKVEKLAVADALRVVRMAQVVLLVVDAN 293
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
++ VEEGR LV+ +NK D + R A+ R V ++Q + Q+ G
Sbjct: 294 QILDKQDLTIARTVVEEGRALVIALNKWDAVDDR---AMALR---QVEDKLQAALAQIKG 347
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKI 525
+ VV SAL+G+ ++ ++ TY +W R+PT++LNRW+ V+ H + + KI
Sbjct: 348 VEVVTISALQGKKLDTLLDLILSTYGQWNRRIPTAQLNRWIEGVLDHHPPPLVEGRRVKI 407
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+Y TQVK RPPT F++ L ++ R+L L+E FDL G+P+R+ R
Sbjct: 408 RYATQVKTRPPTVALFVNKPLDLPESYQRYLIAHLRETFDLPGVPVRLLLR 458
>gi|307946716|ref|ZP_07662051.1| ribosome-associated GTPase EngA [Roseibium sp. TrichSKD4]
gi|307770380|gb|EFO29606.1| ribosome-associated GTPase EngA [Roseibium sp. TrichSKD4]
Length = 478
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/476 (39%), Positives = 276/476 (57%), Gaps = 37/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF ++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLALVDDTP--GVTRDRRPGEARLGDLRFTIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A + S+ R T + + + +F+ID R+G+ PLD RK + I+
Sbjct: 62 -DADASSLEGRMRKQTEDAIEEANAILFVIDARAGVTPLDAHFAAIARKTTTPV--ILLA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV------EDYM 295
NK E +G ES LG G+PIA+SAE G G+ +LY+AL+P V E+ +
Sbjct: 119 NKAEGRAGESGLY-----ESYSLGLGEPIAVSAEHGEGLADLYDALKPYVDAINEEEEAL 173
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDD---ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
S ++ EDD PL++AIVGRPN GKSTL+N +L EDR+L
Sbjct: 174 RDEARTSIELKFDEDGELIEEEDDPVGTKDRPLRVAIVGRPNAGKSTLINRMLGEDRMLT 233
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V +E++ R V L DTAG ++ + ++ LSV + + + A VV +
Sbjct: 234 GPEAGITRDSISVDWEWRERHVKLFDTAGIRRKARVQEKLEKLSVADALRAIKFAEVVVV 293
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
LDA ++++ ++ EGR LV+ +NK DL+ R+ A +K++++A +
Sbjct: 294 TLDATNSFEKQDLQIIDLVAREGRALVIAINKWDLVEDRE--AAWKKIRDAN----ERCF 347
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q+ G+ + S ++G+G ++ V Y+ W R+ TSRLNRWL KV H +
Sbjct: 348 NQIRGVQIATLSGMQGQGIDRLLESVFTAYEHWNARISTSRLNRWLEKVTNNHPPPAVAG 407
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ +++Y TQ K RPP FVAF S + L ++ R+L +L+E FD+ G PIR + R
Sbjct: 408 RRVRLRYLTQPKTRPPHFVAFCSRPEQLPESYTRYLVNNLREAFDIPGSPIRFSYR 463
>gi|381168263|ref|ZP_09877463.1| GTP-binding protein, essential for cell growth [Phaeospirillum
molischianum DSM 120]
gi|380682774|emb|CCG42281.1| GTP-binding protein, essential for cell growth [Phaeospirillum
molischianum DSM 120]
Length = 470
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 272/478 (56%), Gaps = 43/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ A+V++ P +TRD REG A L + F+V+D+AG E
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGRKLAIVHDLPG--ITRDRREGRASLMGVDFQVVDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E SI R T + + A+ +ID R+G+ PLD LRK + I+
Sbjct: 62 -ELGGDSIEARMRFQTDRAVEEADVALLLIDARAGVTPLDRHFADHLRKAKTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE G E+ LG G+P+ +SAE G GM EL+EAL P + + VL+D
Sbjct: 119 NKCEGKAGAPGLY-----EAYGLGMGEPVPVSAEHGEGMYELFEALMPHAQKAGV-VLDD 172
Query: 302 SCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
D T+ + PL + IVGRPNVGKSTL N LL E+R+L GPEA
Sbjct: 173 EDEDEFPPFPDETAEAAEAEVESDPGRPLTMVIVGRPNVGKSTLGNQLLGEERLLTGPEA 232
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPA--SLSVMQSRKNLMRAHVVALVLD 414
GLTRD++ V + + GR V LVDTAG L+R+ A LSV + +++ RA VV LV+D
Sbjct: 233 GLTRDAIGVEWIHGGRAVKLVDTAG-LRRKANIYDAVEKLSVANTLESIRRAEVVVLVMD 291
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A ++ +EGR LVV VNK D++ Q + R+++ ++T PQV
Sbjct: 292 AAQILDKQDLTILRLIADEGRALVVAVNKWDVVENPQVA--LGRLRD----RLETSAPQV 345
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G+ V SAL GRG +M VID++ W R+PT++LNRWL +V+ RH A P
Sbjct: 346 KGVRTVTMSALNGRGIPQLMDAVIDSWTVWNRRIPTAQLNRWLAEVIERHP---PPALPG 402
Query: 524 ----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQVKARPPTF F + L ++ +R+L L+E FDL G+PIR+ R
Sbjct: 403 GRRYKIRYITQVKARPPTFALFATKPDELPESYVRYLVNGLREAFDLKGVPIRLFVRG 460
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AIVGRPNVGKSTL N L+ +V G+TRD G +VDTAG+
Sbjct: 1 MPFTVAIVGRPNVGKSTLFNRLVGRKLAIVHDLPGITRDRREGRASLMGVDFQVVDTAGF 60
Query: 383 LQREKEKGPASLSV---MQSRKNLMRAHVVALVLDA 415
+E G S+ Q+ + + A V L++DA
Sbjct: 61 ----EELGGDSIEARMRFQTDRAVEEADVALLLIDA 92
>gi|374291690|ref|YP_005038725.1| Ribosome-associated GTPase [Azospirillum lipoferum 4B]
gi|357423629|emb|CBS86489.1| Ribosome-associated GTPase [Azospirillum lipoferum 4B]
Length = 464
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/469 (41%), Positives = 272/469 (57%), Gaps = 31/469 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV+++GRPNVGKS LFNRL ++ ALV +TP VTRD R A +G L F V+D+AGLE
Sbjct: 4 TVVLVGRPNVGKSTLFNRLAGKKLALVDDTP--GVTRDWRSAPAHVGGLSFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R T LA+ A+F+ID R+G+ PLD LR+ + ++
Sbjct: 62 -DVTDDSLEARMRRQTEQALARADVALFIIDARAGITPLDRHFANLLRRGKTPV--LLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--EDYMLRVL 299
NK E + G ES LG GDPI +SAE G GM +L EAL P ED
Sbjct: 119 NKTEGKASQPGMF-----ESYELGLGDPIPLSAEHGEGMADLVEALLPYAPSEDEPKAEE 173
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D PE+D SK P+Q+AIVGRPNVGKSTLLN+LL E+RVL GPEAG+T
Sbjct: 174 VDDGFDPSIPIGDQPEPEEDRSK-PIQIAIVGRPNVGKSTLLNSLLGEERVLTGPEAGMT 232
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V +E++ R LVDTAG +R + ++ L+V S + + A+VV LV+DA +
Sbjct: 233 RDAIAVDWEWRDRRFKLVDTAGMRRRARVDEKVEKLAVADSLRVIRMANVVVLVVDAGAI 292
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ EGR LV+ VNK D + R A+ R V +++ + + G+
Sbjct: 293 LDKQDLTIARLVISEGRALVIAVNKWDTVDDR---AMALR---QVEDKLEASLGYIKGVK 346
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
VV SAL+G ++ V++TY W R+PT++LNRW+ V+ H + + KI+Y
Sbjct: 347 VVTISALKGHKLDTLLDGVLETYTVWNRRIPTAQLNRWIEGVLDHHPPPLVEGRRVKIRY 406
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQVK+RPPTF F++ L ++ R+LT L+E FD+ G+P+R+ R
Sbjct: 407 VTQVKSRPPTFALFVNKPLDLPESYQRYLTGHLRESFDMPGVPVRLLLR 455
>gi|338707750|ref|YP_004661951.1| ribosome-associated GTPase EngA [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294554|gb|AEI37661.1| ribosome-associated GTPase EngA [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 455
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/471 (40%), Positives = 272/471 (57%), Gaps = 35/471 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P+V I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG A L LRF +D+AG
Sbjct: 1 MPSVAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDADLIGLRFLAIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E E + S+ R T + A+F+ID R G+ PLD E+ +WLR + KP+
Sbjct: 59 FEDEDPA-SLPGRMRFQTEAAVKDCDVALFVIDARQGVTPLDEEIARWLRALS---KPVL 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NKCE +G L E+ LGFG+P+ SAE G G+ L++AL P VE
Sbjct: 115 VVANKCEGRGGESGFL-----EAYSLGFGEPLPFSAEHGEGLVGLFQALLPFVEG---ET 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + T E D++ PLQLAIVGRPN GKSTL+N L+ EDR++ GPEAG+
Sbjct: 167 SEKVALDDEKDETEKTEEEIDQT--PLQLAIVGRPNAGKSTLINRLIGEDRMITGPEAGI 224
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + +E+QGR V L+DTAG ++ + LSVM + + + A VV L+LDA +
Sbjct: 225 TRDSIAIDWEWQGRPVRLIDTAGLRKKARVVDKMERLSVMDTFRTIDYAEVVVLLLDATQ 284
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR L++ +NK D++ +N + + +A+ Q + + QV G+
Sbjct: 285 GLEGQDLRIADRVLEEGRSLIIAINKWDMV---ENPSAF---LQAIRQGLDDGLAQVKGV 338
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++ SA+ GRG ++ +T + W R+ T +LNRWL + + H+ + K++
Sbjct: 339 PLITISAITGRGIDPLLKAAFETRKAWSRRVSTGQLNRWLTRAITHHAPPAPGGKRIKLR 398
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQ+K RPPTFV F + L + R+L SL+ D G +PIR+ RS
Sbjct: 399 YLTQIKTRPPTFVLFGTRVDQLPTSYERYLVNSLRSDLGFGAVPIRLHFRS 449
>gi|383772450|ref|YP_005451516.1| GTP-binding protein EngA [Bradyrhizobium sp. S23321]
gi|381360574|dbj|BAL77404.1| GTP-binding protein EngA [Bradyrhizobium sp. S23321]
Length = 460
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 264/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F+ID R GL P D + RK KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTEAAIAQADALFFVIDARIGLTPTDRAFADFARKAN---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+ALR L
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDALRE---------LM 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + + D E++ + P+++AIVGRPN GKST +N LL E+R+L PEAG TR
Sbjct: 164 PEPVEEDEAEDDAPLTEEEAATRPIRVAIVGRPNAGKSTFINHLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV +++DA
Sbjct: 224 DSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ + A+ ++A ++PQV G+P+
Sbjct: 284 EEQDLRIADLIEREGRAVVLAVNKWDLMESKGGGAISNLRRDA-----DHLLPQVKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+ T+ LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGIDRLMQAIQDAYAVWNRRVSTAALNRWFEEAVQANPPPAVSGRRLKLNYI 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + +R+L S++E F+L G P+RIT R
Sbjct: 399 TQTKARPPSFVLFCSRADAVPQSYMRYLVNSMREAFELPGTPVRITLR 446
>gi|421600251|ref|ZP_16043297.1| GTP-binding protein Der [Bradyrhizobium sp. CCGE-LA001]
gi|404267634|gb|EJZ32268.1| GTP-binding protein Der [Bradyrhizobium sp. CCGE-LA001]
Length = 458
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 266/468 (56%), Gaps = 40/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F+ID R GL P D + RK KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTETAIAQADALFFVIDARVGLTPTDRAFADFARKAN---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+AL R++
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDAL--------ARLMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ ++ D E++ + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPVDEDED---DAPISEEEVATRPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 221
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D
Sbjct: 222 DSIAVEINWKGRDFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRF 281
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ + A+ ++A +PQ+ G+P+
Sbjct: 282 EEQDLRIADLIEREGRAVVLAVNKWDLMETKGGGAISGLRRDA-----DHWLPQLKGVPI 336
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+PT+ LNRW + + + S + K+ Y
Sbjct: 337 VAVSGLMGEGIDRLMQAIQDAYAIWNRRVPTAALNRWFEQAIQANPPPAVSGRRLKLNYI 396
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT S++E F+L G PIRIT R
Sbjct: 397 TQTKARPPSFVLFCSRADAVPQSYLRYLTNSMRETFELPGTPIRITLR 444
>gi|84684686|ref|ZP_01012586.1| GTP-binding protein EngA [Maritimibacter alkaliphilus HTCC2654]
gi|84667021|gb|EAQ13491.1| GTP-binding protein EngA [Maritimibacter alkaliphilus HTCC2654]
Length = 481
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 191/497 (38%), Positives = 280/497 (56%), Gaps = 35/497 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV N P VTRD+REG A+LG++RF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDNQPG--VTRDLREGEARLGEMRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D LRK + I+A
Sbjct: 62 -DATDDSLEGRMRRLTERAVEMADACLFLIDARAGVLPTDEIFADILRKKNAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PIA+SAE G GM +L AL P E+ R
Sbjct: 119 NKAEGKAGEAGMI-----EAWGLGLGEPIALSAEHGEGMGDLAAALAPVAEEMASR---P 170
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
S D +P + PLQ+A++GRPN GKSTL+N L+ E+R+L GPEAG+TRD
Sbjct: 171 SPEPETDVDVDQGAPRIPTREKPLQVAVIGRPNAGKSTLINRLIGEERLLTGPEAGITRD 230
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ + F++ G + DTAG ++ K ++ LSV + + A VV ++LDA
Sbjct: 231 SISLAFDWDGTPTRIFDTAGMRKKAKVQEKLEKLSVADGLRAVKFAEVVVVLLDAAIPFE 290
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R A EGR +VV VNK D+ + +Q + R + ++PQ+ G P+V
Sbjct: 291 QQDLRIADLAEREGRAVVVAVNKWDVEAEKQQKLKHLR------DGFEKLLPQLRGAPLV 344
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
SA GRG + V+ ++ W R+PT++LN WL +++ +H S + K++Y T
Sbjct: 345 TISAKTGRGMDRLHAAVMRAHEVWNRRIPTAKLNDWLAEMIAQHPPPAPSGRRIKLRYMT 404
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV----PRKCGSS 585
QVK RPP FV S + L DA R+L L+E+FD+ G PIR+ RS P K +
Sbjct: 405 QVKTRPPGFVVMCSNPEKLPDAYSRYLVNGLRENFDMPGTPIRLHMRSQADKNPYKNKTK 464
Query: 586 SSRQNTGQKVGRTFSDK 602
S+ + +G+ +D+
Sbjct: 465 STPSRLRKHLGKGRADE 481
>gi|159043715|ref|YP_001532509.1| GTP-binding protein EngA [Dinoroseobacter shibae DFL 12]
gi|189037146|sp|A8LHW1.1|DER_DINSH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157911475|gb|ABV92908.1| small GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 490
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 188/476 (39%), Positives = 274/476 (57%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T ++ +F+ID R G+ P D LR+ + ++
Sbjct: 62 -EATDDSLQGRMRRLTERAVSMADACLFLIDARVGVTPTDEVFADILRRSNAHV--LLGA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+P+A+SAE G GM EL AL P ++ + +
Sbjct: 119 NKAE----GRAAEAGLI-EAYALGLGEPLALSAEHGEGMAELTGALMPLIDAF--EETEN 171
Query: 302 SCTQNNSSTQDVTSPEDDESKL--------PLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ T++ T P+ +E + PLQ+A+VGRPN GKSTL+N LL EDR+L G
Sbjct: 172 AETEDAPETDVALDPDAEEETVVRVPTKAKPLQVAVVGRPNAGKSTLINQLLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRD++ + ++ G V + DTAG ++ K ++ LSV + + A VV ++
Sbjct: 232 PEAGITRDAISLAMDWDGLPVRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVL 291
Query: 413 LDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA +++R A EGR +V+ VNK D+ +Q K +KEA + ++P
Sbjct: 292 LDAGIPFEQQDLRIADLAEREGRAVVIAVNKWDMEDDKQGK--LKELKEA----FERLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q+ G P+V SA GRG + V+ ++ W R+PT+ LNRWL ++ H +
Sbjct: 346 QLRGAPLVTVSAKTGRGMDRLRDAVLRAHEVWNRRVPTAALNRWLGAMVEAHPPPAPGGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP FV S + + ++ R+L L+EDFD+ G PIR+T RS
Sbjct: 406 RIKLRYMTQAKTRPPGFVVMCSYPEKIPESYTRYLVNGLREDFDMPGTPIRLTMRS 461
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+P LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MPFTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGAARLGDLRFTVIDTAG 59
>gi|288958550|ref|YP_003448891.1| GTP-binding protein [Azospirillum sp. B510]
gi|288910858|dbj|BAI72347.1| GTP-binding protein [Azospirillum sp. B510]
Length = 464
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 190/469 (40%), Positives = 268/469 (57%), Gaps = 31/469 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV+++GRPNVGKS LFNRL ++ ALV +TP VTRD R A +G L F V+D+AGLE
Sbjct: 4 TVVLVGRPNVGKSTLFNRLAGKKLALVDDTP--GVTRDWRSAPAHVGGLSFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R T LA+ A+F+ID R+G+ PLD LR+ + ++
Sbjct: 62 -DVTDDSLEARMRRQTEQALARADVALFIIDARAGVTPLDRHFANLLRRGKTPV--LLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP--SVEDYMLRVL 299
NK E G E+ LG GDPI +SAE G GM +L EAL P E+
Sbjct: 119 NKTEGRAGQPGMF-----EAYELGLGDPIPLSAEHGEGMADLVEALLPYAPAEEAGEAEE 173
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D PE+D SK P+Q+AIVGRPNVGKSTLLN+LL E+RVL GPEAG+T
Sbjct: 174 RDDGFDPSIPVGDQPEPEEDLSK-PIQIAIVGRPNVGKSTLLNSLLGEERVLTGPEAGMT 232
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V +E++ R LVDTAG +R + ++ L+V S + + A+VV LV+DA +
Sbjct: 233 RDAITVDWEWRDRRFKLVDTAGMRRRARVDEKVEKLAVADSLRVIRMANVVVLVVDAGAI 292
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ EGR LV+ VNK D + R + V ++Q + + G+
Sbjct: 293 LDKQDLTIARLVISEGRALVIAVNKWDTVDDRAMAL------RQVEDKLQAALGYIKGVT 346
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
VV SAL+G ++ V++TY W R+PT++LNRW+ V+ H + + KI+Y
Sbjct: 347 VVTISALKGHKLETLLDGVLETYTVWNRRIPTAQLNRWIEGVLEHHPPPLVEGRRVKIRY 406
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQVK RPPTF F++ L ++ R+LT L+E FD+ G+P+R+ R
Sbjct: 407 VTQVKTRPPTFALFVNKPLDLPESYQRYLTTHLRESFDMPGVPVRLLLR 455
>gi|294086068|ref|YP_003552828.1| Small GTP-binding protein domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665643|gb|ADE40744.1| Small GTP-binding protein domain protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 478
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 271/485 (55%), Gaps = 46/485 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T I+GRPNVGKS LFNRLI R+ A+V + P VTRD REG +L LRF+++D+AGLE
Sbjct: 3 TFAIVGRPNVGKSTLFNRLIGRQHAIVDDQPG--VTRDRREGDGRLAGLRFRIIDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA+ GS+ DR T + + ++D R G+ P+D +RK + I+
Sbjct: 61 -EASDGSLEDRMRYQTELAIVGADVTLLVVDARVGITPVDKFFAGEIRKSGAHV--ILVC 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL-- 299
NKCE +G AES LG G+P+AISA G G+ +L++A+ + + L +
Sbjct: 118 NKCEGKIGASG-----VAESWTLGLGEPVAISAAHGEGLVDLHDAMLEAADKQGLAGVLT 172
Query: 300 -NDSCTQN---------------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNA 343
+D T + ++ V +D+ K P+++AIVGRPN+GKSTL+N+
Sbjct: 173 GDDILTTHEDDDDLPDNDAEAPLDADGNPVDVWQDEAGKQPMRIAIVGRPNMGKSTLINS 232
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKN 402
LL EDR+LVGPEAG+TRD++ + FE+QGR LVDTAG +R + L V + +
Sbjct: 233 LLDEDRLLVGPEAGITRDAIELPFEWQGRPYKLVDTAGMRRRARVVDKVEKLMVDDALRA 292
Query: 403 LMRAHVVALVLDAEE---------VRAV-EEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ AH+ L++DA E R + EGR +V+ NK D + +Q SA+
Sbjct: 293 IQYAHLCVLLIDATEELHKQDLSIARLIANEGRAIVIGANKWDAVRNKQESAMQ------ 346
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
+ ++T + Q+ G+PVV S L +G ++ D Y W R+ T RLNRWL ++
Sbjct: 347 ISDRLKTSMSQLKGVPVVQMSGLHKKGLGNLLKAADDMYAVWNTRVSTGRLNRWLEIMLE 406
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H + + +I+Y TQ+K RPPTF F+S L D+ LR+L+ L+ DF L GIPI
Sbjct: 407 AHPPPLVEGRRLRIRYITQIKTRPPTFALFVSRPADLPDSYLRYLSTGLRNDFGLRGIPI 466
Query: 572 RITQR 576
R+ R
Sbjct: 467 RMVMR 471
>gi|402819472|ref|ZP_10869040.1| hypothetical protein IMCC14465_02740 [alpha proteobacterium
IMCC14465]
gi|402511619|gb|EJW21880.1| hypothetical protein IMCC14465_02740 [alpha proteobacterium
IMCC14465]
Length = 464
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 284/473 (60%), Gaps = 40/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL ++ ALV + P VTRD REG A+LG+LRFKV+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLTGKKLALVDDRP--GVTRDRREGDARLGELRFKVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A +G++ R T + + + ++D R+GL P D +RK ++ ++A
Sbjct: 62 -DAKTGTLEARMRQQTEIAITQADMVLMLVDARTGLLPEDRYFADLIRKSPHEV--VLAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--EDYMLRVL 299
NK E G L ES LGFGDPI +SAE G G+ ELY+ ++ ++ E Y L
Sbjct: 119 NKYEGDKAEAGYL-----ESYELGFGDPIGLSAEHGHGIGELYDRIKTAMGAEAY----L 169
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ T++ + D +P + + +PL++AI+GRPN GKSTL+N L+ E+R+L GPEAG+T
Sbjct: 170 DEDETEDEAFDPD--TPFEVDPDVPLRVAILGRPNAGKSTLINHLVGEERMLTGPEAGIT 227
Query: 360 RDSVRVHFEY----QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
RD++ + +++ Q R + L DTAG ++ + + LSV + + + A +V L++D
Sbjct: 228 RDAIGIDWQWEEGAQKRPIKLWDTAGIRRKSRVSEKLEKLSVADALRAVKFAEIVVLLID 287
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A ++V+ + EGR +V+ +NK DL R V+E + +++ +P++
Sbjct: 288 ADTPFDKQDVQLADLVEREGRAMVIAINKWDLKLDRNE------VREIIRDKLEFALPRL 341
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
GIPV+ SA G+G +M VI ++ W R+PT+RLN+WL + RH+ +P
Sbjct: 342 RGIPVITMSAKTGKGVERLMPAVIRQHEIWNGRVPTARLNKWLADAITRHAPPADKGRPV 401
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+++Y TQ KARPPTF AF S + ++ +R+L SL+E FDL G+PIR R
Sbjct: 402 RLRYVTQAKARPPTFAAFSSRGHAVPESYIRYLINSLREAFDLQGVPIRFFIR 454
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDI-------REGLAK 166
++D ++ V I+GRPN GKS L N L+ E + P+ +TRD EG K
Sbjct: 186 EVDPDVPLRVAILGRPNAGKSTLINHLV--GEERMLTGPEAGITRDAIGIDWQWEEGAQK 243
Query: 167 LGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLE 223
K+ D+AG+ ++ L++ + A+ L +FA + +ID + D++
Sbjct: 244 RP---IKLWDTAGIRRKSRVSEKLEKLS--VADALRAVKFAEIVVLLIDADTPFDKQDVQ 298
Query: 224 VGKWLRKHAPQIKPIVAMNKCE 245
+ + + + ++A+NK +
Sbjct: 299 LADLVEREGRAM--VIAINKWD 318
>gi|407769948|ref|ZP_11117321.1| GTP-binding protein Der [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287092|gb|EKF12575.1| GTP-binding protein Der [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 493
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 272/508 (53%), Gaps = 60/508 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+LG + F ++D+AGLE
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRYGRARLGHMGFDIIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
EA SI + + + A F+ID R+GL PLD WLRK KP+ V
Sbjct: 62 EAFDDSIEGKMRQQSEMAFEECDIAFFLIDARAGLTPLDNHFADWLRKRK---KPVYVIA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM------ 295
NK H G AG E+ LG GD ISAE GLGM L + +RP E+Y
Sbjct: 119 NK----HEGRDQDAGLY-EAYGLGLGDVAPISAEHGLGMELLIDIMRPHWEEYRDKQRKA 173
Query: 296 -----LRVLNDSCTQNNSSTQDVTSP-----------------EDDESKLPLQLAIVGRP 333
+ ++D + D + P D SK+ QLAIVGRP
Sbjct: 174 RKEGDIAAIDDDFEDDEMDEDDGSFPSFEIEYDEDDEGEEEVVRKDNSKI--QLAIVGRP 231
Query: 334 NVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPA 392
NVGKSTLLN LL E+RV+ GP+AGLTRDS+ V + Y+GR + LVDTAG +++K +
Sbjct: 232 NVGKSTLLNQLLGENRVMTGPQAGLTRDSIAVDWSYEGRPIRLVDTAGMRRKKKIDDRVE 291
Query: 393 SLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQN 442
LSV + + + A VV ++LDA +EEGR L++ VNK D + +
Sbjct: 292 KLSVTDTLRVIRYAQVVVIMLDATNTLDKQDLTIARMVLEEGRALIIAVNKWDAVKDKSG 351
Query: 443 SALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSR 502
V A+ ++ T Q GIP++ SAL GRG +M V+D Y W R+PTS+
Sbjct: 352 ------VMSALRDKLDTSFAQAKGIPILTFSALTGRGTDTLMPTVLDIYDIWSRRIPTSQ 405
Query: 503 LNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLK 561
LNRWL + RH S + +++Y TQ K+RPP+F S L ++ R+L L+
Sbjct: 406 LNRWLEAITERHLPPVISGRRIRLRYMTQAKSRPPSFFINCSKAAELPESYTRYLINGLR 465
Query: 562 EDFDLGGIPIRITQRSVPRKCGSSSSRQ 589
EDFD+ G+PIRI RS G+ ++
Sbjct: 466 EDFDMPGVPIRIYLRSSDNPYGNKKKKR 493
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV--RVHFEYQGRTVYLVDTA 380
+ L++AI+GRPNVGKSTL N L+ + LV + G+TRD R + G + +DTA
Sbjct: 1 MSLKVAIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRYGRARLGHMGFDI--IDTA 58
Query: 381 G 381
G
Sbjct: 59 G 59
>gi|254501747|ref|ZP_05113898.1| putative GTPase [Labrenzia alexandrii DFL-11]
gi|222437818|gb|EEE44497.1| putative GTPase [Labrenzia alexandrii DFL-11]
Length = 478
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 278/478 (58%), Gaps = 44/478 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF ++D+AGLE
Sbjct: 7 TVAIVGRPNVGKSTLFNRLVGKRLALVDDTP--GVTRDRRPGEARLGDLRFTIIDTAGLE 64
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A S+ R T + +F+ID R+G+ PLD RK +P++ +
Sbjct: 65 -DADKASLEGRMRRQTEEAIETADAVLFVIDARAGVTPLDAHFAAVARK---TTRPVILL 120
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G ++G ES LG G+PIA+SAE G G+++LY+AL+P V+ RV
Sbjct: 121 ANKAE----GRAGVSGLY-ESFSLGLGEPIAVSAEHGEGLSDLYDALKPHVD----RVTE 171
Query: 301 DSCTQNNSSTQDVTSPEDDES----------KLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + + +V ED E + PL++AIVGRPN GKSTL+N ++ EDR+
Sbjct: 172 EEDAKREEAVTNVDVDEDGEIVDNEDPVGTIERPLRVAIVGRPNAGKSTLINQMVGEDRM 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRDS+ V + + R + L DTAG ++ + ++ LSV + + + A VV
Sbjct: 232 LTGPEAGITRDSISVDWTWHDRHIKLFDTAGIRKKARVQEKLEKLSVADALRAIKFAEVV 291
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+ LDA ++++ ++ EGR LV+ VNK DL+ R+ + +K++++A +
Sbjct: 292 VVTLDATMSFEKQDLQIIDLVAREGRALVIAVNKWDLIEDREEA--WKKIRDAN----ER 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
Q+ G+ +V S ++G+G ++ V Y W R+ T+ LNRWL + H
Sbjct: 346 YFNQIRGVRIVTLSGIQGQGIDRLVEGVFAAYDAWNARVSTAGLNRWLERATTSHPPPAV 405
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + +I+Y TQ K RPP FVAF S + L ++ R+L SL+E FD+ G PIR++ R
Sbjct: 406 AGRRVRIRYMTQPKTRPPHFVAFSSRPEQLPESYTRYLINSLREKFDIQGTPIRLSYR 463
>gi|254476934|ref|ZP_05090320.1| small GTP-binding protein domain [Ruegeria sp. R11]
gi|214031177|gb|EEB72012.1| small GTP-binding protein domain [Ruegeria sp. R11]
Length = 488
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 276/507 (54%), Gaps = 49/507 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEARLGDLRFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R G+ P D LRK + + I+A
Sbjct: 62 -EATDNSLEGRMRRLTERAVDMADVCLFMIDARVGVTPTDEVFADILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+PI +S E G GM +LY L P + +
Sbjct: 119 NKSE------GSAADAGVLEAYGLGLGEPIRLSGEHGEGMNDLYVQLMPLADKF------ 166
Query: 301 DSCTQNNSSTQDVTS------------PEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
D + S DVT P +K PLQ+A+VGRPN GKSTL+N +L ED
Sbjct: 167 DKIAEATSPETDVTVDEEIDEDDDLSVPMPTANK-PLQVAVVGRPNAGKSTLINKILGED 225
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
R+L GPEAG+TRD++ + ++QG + + DTAG ++ K ++ LSV + + A
Sbjct: 226 RLLTGPEAGITRDAISLQIDWQGVPMRVFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAE 285
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV ++LDA +++R A EGR +VV VNK D +Q + +KEA +
Sbjct: 286 VVVVLLDASIPFEQQDLRIADLAEREGRAVVVAVNKWDAEENKQEK--LRDLKEAFGR-- 341
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SW 516
++PQ+ G P+V SA G+G + ++ Y+ W R+PT+ LNRWL ++ +H
Sbjct: 342 --LLPQLRGAPLVTVSAKTGKGLDRLHAAIMRAYEIWNRRVPTAALNRWLIGMLEQHPPP 399
Query: 517 KDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + K++Y TQ K RPP FV S L D+ R+L L++DFD+ G PIR+ R
Sbjct: 400 APQGKRIKLRYMTQAKTRPPAFVVMCSHPDKLPDSYTRYLVNGLRQDFDMPGTPIRLYMR 459
Query: 577 SVPRKCGSSSSRQNTGQKVGRTFSDKR 603
K R+ + + + R
Sbjct: 460 GQGDKNPYKGKREKNAGALAKHLKNNR 486
>gi|452752757|ref|ZP_21952497.1| GTP-binding protein EngA [alpha proteobacterium JLT2015]
gi|451959829|gb|EMD82245.1| GTP-binding protein EngA [alpha proteobacterium JLT2015]
Length = 450
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 272/477 (57%), Gaps = 56/477 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+IIGRPNVGKS LFNRL+ +R ALV +TP VTRD REG A L DLRF +D+AG
Sbjct: 3 LPKVVIIGRPNVGKSTLFNRLVGKRIALVDDTP--GVTRDRREGEATLSDLRFTAVDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLR-KHAPQIKPI 238
LE +A + S+ R T L A+ +ID R+GL PLD WLR +H P I
Sbjct: 61 LE-DAVAESLSGRMRMQTEAALGDAAAALLVIDSRAGLTPLDRHFADWLRTQHVPLI--- 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E +G E+ LGFG+ +AISAE G GM +L+EAL P V+
Sbjct: 117 LVANKAEGSAGDSGIY-----EAFELGFGEAVAISAEHGEGMGDLHEALAPYVDAAT--- 168
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
S Q ++ +D+E++ PL+LAIVGRPN GKSTL+N +L+E+R++ GPEAG+
Sbjct: 169 ---SALQRDA--------DDEEAEGPLRLAIVGRPNAGKSTLINRILEEERLVTGPEAGI 217
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRDS+ + + +QGR V L+DTAG +R + + LSV +R+ + A VV L+LDA
Sbjct: 218 TRDSIEIEWSWQGRDVRLIDTAGVRKRARVQDKLEKLSVADTRRAIDFAEVVVLLLDATL 277
Query: 417 ---------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ ++EGR L++ ++K D+ S L+ VK A+ + Q++G+
Sbjct: 278 GLEAQDLKIADQVLQEGRALIICLSKWDV--AEDQSRLFNGVKAALADGLS----QISGV 331
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
P++ S G+G ++ + W R+ T LNRW + + D++ P
Sbjct: 332 PLLTVSGETGKGIDTLIQVAFEQRDAWSRRVSTGALNRWFEEAL------DKNPPPAPGG 385
Query: 524 ---KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K+RPP+F+ F S L + R+L SL+ FDL G+P+R+T RS
Sbjct: 386 KRIKMRYITQAKSRPPSFIVFGSRLDALPRSYERYLVNSLRSAFDLEGVPLRLTMRS 442
>gi|384219444|ref|YP_005610610.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354958343|dbj|BAL11022.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 461
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 266/468 (56%), Gaps = 37/468 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLAFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F+ID R GL P D + RK KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTEAAIAQADALFFVIDARIGLTPTDRAFADFARKAD---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+ALR ++
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDALR--------ELMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ ++ + + E++ + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPVDEDEAEDDEPPLTEEEAATRPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V + GR + DTAG +R + E+ LSV + + + A VV +++D
Sbjct: 225 DSIAVEINWNGRDFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVMMMDTQNRF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ + A+ ++A +PQ+ G+P+
Sbjct: 285 EEQDLRIADLIEREGRAVVLAVNKWDLMETKGGGAISGLRRDA-----DHWLPQIKGVPI 339
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+PTS LNRW + + + S + K+ Y
Sbjct: 340 VAVSGLMGEGIDRLMQAIQDAYAVWNRRVPTSALNRWFEQAVQANPPPAVSGRRLKLNYI 399
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT S++E F+L G P+RIT R
Sbjct: 400 TQNKARPPSFVLFCSRADAVPQSYLRYLTNSMRETFELPGTPVRITLR 447
>gi|372279238|ref|ZP_09515274.1| GTP-binding protein Der [Oceanicola sp. S124]
Length = 517
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 190/483 (39%), Positives = 267/483 (55%), Gaps = 47/483 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDL F V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGAARLGDLDFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R G+ P D + LRK A + I+A
Sbjct: 62 -EATDDSLQGRMRRLTERAVEMADICLFMIDARVGVTPTDEVFAEILRKKADHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+P+ ISAE G GM +L+ AL P E + R
Sbjct: 119 NKGEGAAADAGVL-----EAWNLGLGEPLRISAEHGEGMADLFGALLPLSETFAART--- 170
Query: 302 SCTQNNSSTQDVTSP---EDDESKL-------------PLQLAIVGRPNVGKSTLLNALL 345
+ ++ + DV+ P EDD+S L PLQ+A+VGRPN GKSTL+N +L
Sbjct: 171 AVAESAAPEMDVSVPDLGEDDDSDLSAAEAAWKPSEQRPLQIAVVGRPNAGKSTLINKIL 230
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ + ++ G + DTAG ++ K + LSV + +
Sbjct: 231 GEDRLLTGPEAGITRDSISLRIDWAGTPTRIFDTAGMRKKAKVQDKVEKLSVADGLRAVK 290
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A VV ++LDA +++R A EGR +V+ VNK D+ +Q K +KEA
Sbjct: 291 FAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNKWDIEDEKQEK--LKALKEA-- 346
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
++PQ+ G P++ SA GRG + ++ + W R+ T RLNRWL ++ H
Sbjct: 347 --FDRLLPQLRGAPLITVSARTGRGFDRLHDAILRAHAVWNRRISTGRLNRWLTGMLEAH 404
Query: 515 SWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ +++Y TQ K RPP FV S L + R+L L+ DFD+ G PIR+
Sbjct: 405 PPPAPGGRRIRLRYITQAKTRPPGFVVMCSHPDKLPASYSRYLVNGLRADFDMPGTPIRL 464
Query: 574 TQR 576
T R
Sbjct: 465 TMR 467
>gi|398820090|ref|ZP_10578628.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. YR681]
gi|398229221|gb|EJN15305.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. YR681]
Length = 460
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 264/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLPG--VTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F++D R GL P D + RK KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARKAN---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+ALR L
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDALRE---------LM 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + D E++ + P+++AIVGRPN GKST++N LL E+R+L PEAG TR
Sbjct: 164 PEPVEEDEDEDDAPLTEEEAATRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV +++DA
Sbjct: 224 DSIAVEINWKGRQFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ + A+ ++A ++PQV G+P+
Sbjct: 284 EEQDLRIADLIEREGRAVVLAVNKWDLMESKGGGAISNLRRDA-----DHLLPQVKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+ TS LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGIDRLMQAIQDAYALWNKRVSTSALNRWFEQAVQANPPPAVSGRRLKLNYI 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 399 TQTKARPPSFVLFCSRADAVPQSYLRYLINSMRETFELPGTPVRITLR 446
>gi|163746867|ref|ZP_02154224.1| GTP-binding protein EngA [Oceanibulbus indolifex HEL-45]
gi|161379981|gb|EDQ04393.1| GTP-binding protein EngA [Oceanibulbus indolifex HEL-45]
Length = 493
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/483 (39%), Positives = 269/483 (55%), Gaps = 50/483 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG AKL DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAAKLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +FMID R G+ P D+ + LRK + + I+A
Sbjct: 62 -EVTDDSLQGRMRRLTERAVDMADICLFMIDARVGVTPSDMVFAEILRKKSAHV--ILAG 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ +LY L P ++Y D
Sbjct: 119 NKAEGKAADAGMI-----EAYSLGLGEPIRLSAEHGEGLNDLYSMLMPLADEY-----ED 168
Query: 302 SCTQNNSSTQDVTSPEDDES-----------KLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
Q+ T DV PEDD PLQ+A+VGRPN GKSTL+N +L EDR+
Sbjct: 169 RAVQDAPET-DVDLPEDDADLEAETVPMPTRAKPLQVAVVGRPNAGKSTLINQILGEDRL 227
Query: 351 LVGPEAGLTRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
L GPEAG+TRD++ + E+ G + + DTAG ++ K ++ LSV + +
Sbjct: 228 LTGPEAGITRDAISLMTEWAGPDGDPVPMRIFDTAGMRKKAKIQEKLEKLSVSDGLRAVK 287
Query: 405 RAHVVALVLDAE------EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A VV ++LDAE ++R A EGR +VV VNK D+ RQ+ + +KE+
Sbjct: 288 FAEVVVVLLDAEIPFEQQDLRIADLAEREGRAVVVAVNKWDIEENRQDK--LRELKES-- 343
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ ++PQ+ G P++ SA GRG + ++ Y+ W R+ T++LNRWL +M H
Sbjct: 344 --FERLLPQLRGAPLITVSAKTGRGLDRLQAAIMRAYEVWNRRITTAQLNRWLSGMMEAH 401
Query: 515 -SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q + K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+
Sbjct: 402 PPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKVPESYSRYLVNGLRVDFDMPGTPIRL 461
Query: 574 TQR 576
R
Sbjct: 462 WMR 464
>gi|347527682|ref|YP_004834429.1| GTP-binding protein EngA [Sphingobium sp. SYK-6]
gi|345136363|dbj|BAK65972.1| GTP-binding protein EngA [Sphingobium sp. SYK-6]
Length = 458
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/478 (38%), Positives = 268/478 (56%), Gaps = 49/478 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG A+L L+F+++D+A
Sbjct: 1 MLPVVAIVGRPNVGKSTLFNRLVGKRIALVDDQP--GVTRDRREGDAELLGLKFRIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E ++ R T + A+ MID R+G+ PLD + +WLR P+
Sbjct: 59 GFE-EDDPQTLPGRMRAQTEMAVRGASVALLMIDARAGVAPLDEHIARWLRAGD---TPV 114
Query: 239 VAM-NKCESLHNGTGSLAGAA-AESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
V M NK E GS A A E+ LGFG+PIA SAE GLG+ +L+EA+RP VE
Sbjct: 115 VLMANKAE------GSAADAGLMEAYALGFGEPIAFSAEHGLGLADLFEAIRPHVE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
++ + E+ + PLQLAIVGRPN GKSTL+N +L EDR++ GPEA
Sbjct: 165 --------RDEDEADEAGDDEEADENAPLQLAIVGRPNAGKSTLINRILGEDRLITGPEA 216
Query: 357 GLTRDSVRVHFEYQG-----RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
G+TRDS+ V + + R V L+DTAG +R K + LSV + + + A VV
Sbjct: 217 GITRDSIAVDWTWHAPDGRVRPVRLIDTAGMRKRAKVQDKLEKLSVSDALRAVDFAEVVV 276
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LDA + + + EGR LV+ +NK D+ S+LY+ V++A+ + +
Sbjct: 277 LLLDATKGLEAQDLKIADKVLSEGRALVIALNKWDV--AENGSSLYQGVRKALDEGLA-- 332
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
QV G+P++ S G+G ++ DT +W R+PTS LNRW + +
Sbjct: 333 --QVRGVPLLTVSGATGKGLDDLLGAAFDTRSRWSQRVPTSLLNRWFDSALEANPPPAPG 390
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ + RPPTFV F + L ++ R+L ++ + D G+PIR+ RS
Sbjct: 391 GRRIKLRYITQARIRPPTFVLFGTRLDELPESYRRYLVNGIRRELDFSGVPIRLNLRS 448
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDI----REGLAK 166
D + D N + I+GRPN GKS L NR++ E + P+ +TRD A
Sbjct: 175 DDEEADENAPLQLAIVGRPNAGKSTLINRIL--GEDRLITGPEAGITRDSIAVDWTWHAP 232
Query: 167 LGDLR-FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDL 222
G +R +++D+AG+ A L++ + ++ L FA + ++D GL DL
Sbjct: 233 DGRVRPVRLIDTAGMRKRAKVQDKLEKLS--VSDALRAVDFAEVVVLLLDATKGLEAQDL 290
Query: 223 EVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAG---AAAESLMLGFGDP-IAISAETGL 278
++ + + ++A+NK + NG+ G A E L G P + +S TG
Sbjct: 291 KIADKVLSEGRAL--VIALNKWDVAENGSSLYQGVRKALDEGLAQVRGVPLLTVSGATGK 348
Query: 279 GMTELYEA 286
G+ +L A
Sbjct: 349 GLDDLLGA 356
>gi|365884393|ref|ZP_09423446.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
ORS 375]
gi|365287064|emb|CCD95977.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
ORS 375]
Length = 456
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/484 (39%), Positives = 263/484 (54%), Gaps = 46/484 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKL DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLHDLHFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARVGLTPADRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPIAISAE G GM ELY+A+ V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIAISAEHGEGMGELYDAVSKLVPPTDDEEDE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T + + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 REETDEERAAR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR+ + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 221 DSIAVEIEHKGRSFRIYDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ G+ Q SAL + + +PQV G
Sbjct: 281 EEQDLRIADLIEREGRALVLAVNKWDLMDGKPGQISALRR--------DADHWLPQVAGA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M +++ Y W R+PT+ LNRW + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVEAYAIWNRRVPTAALNRWFEGAIADNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLVNSMRETFELPGTPVRITLREKANPFAHKR 452
Query: 587 SRQN 590
R N
Sbjct: 453 KRPN 456
>gi|209964703|ref|YP_002297618.1| GTP-binding protein EngA [Rhodospirillum centenum SW]
gi|209958169|gb|ACI98805.1| GTP-binding protein, putative [Rhodospirillum centenum SW]
Length = 478
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/481 (40%), Positives = 268/481 (55%), Gaps = 45/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+L + V+D+AGLE
Sbjct: 9 TVAIVGRPNVGKSTLFNRLVGKRLALVDDTPG--VTRDWRAGEARLAGIELTVVDTAGLE 66
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E S+ R T + + A+F+ID R+G+ PLD WLRK + I+
Sbjct: 67 -EVFDDSLEARMRRQTERAIERADVALFLIDARAGVTPLDHHFAGWLRKGRTPV--ILVA 123
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+P+ +SAE G G+ +L EAL P Y + ++
Sbjct: 124 NKAEGAAGRPGLL-----EAFELGLGEPVPLSAEHGEGLADLVEALLP----YEPKPEDE 174
Query: 302 SCTQNNSSTQDVTSPEDDESKL-------------PLQLAIVGRPNVGKSTLLNALLQED 348
+ D P+ E+ LQLAIVGRPNVGKSTLLNAL+ E+
Sbjct: 175 QPDEEIWEAWDEALPDPAEAGADGAAEEPAPEEPKALQLAIVGRPNVGKSTLLNALVGEE 234
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAH 407
RVL GPEAG+TRD++ V + ++G+ V LVDTAG +R + G L+V + + + AH
Sbjct: 235 RVLTGPEAGMTRDAIAVEWNWRGQPVRLVDTAGLRRRARVDGKLEKLAVADTLRVIRMAH 294
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LVLDA + VEEGR LV+ +NK D S A K++++ +
Sbjct: 295 VVVLVLDAHAILDKQDLTIARMVVEEGRALVIAINKWD--SVENKGAALKQLRD----RL 348
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+T +PQV GIP V SAL G+ ++ Y W R+PT++LNRW+R ++ H
Sbjct: 349 ETSLPQVRGIPTVTISALRGQRLDELLDVTQKAYALWNKRIPTAQLNRWVRGMVETHPPP 408
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + KI+Y TQVKARPPTF F++ L + LR+L L+E F++ G+ IR+ R
Sbjct: 409 LVEGRRIKIRYMTQVKARPPTFAVFVNKPVDLPEHYLRYLVNGLREAFEMPGVTIRLLLR 468
Query: 577 S 577
Sbjct: 469 K 469
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 320 ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDT 379
E+K L +AIVGRPNVGKSTL N L+ + LV G+TRD G + +VDT
Sbjct: 3 EAKRRLTVAIVGRPNVGKSTLFNRLVGKRLALVDDTPGVTRDWRAGEARLAGIELTVVDT 62
Query: 380 AGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
AG L+ + + Q+ + + RA V ++DA
Sbjct: 63 AG-LEEVFDDSLEARMRRQTERAIERADVALFLIDA 97
>gi|118588128|ref|ZP_01545538.1| GTP-binding protein EngA [Stappia aggregata IAM 12614]
gi|118439750|gb|EAV46381.1| GTP-binding protein EngA [Stappia aggregata IAM 12614]
Length = 473
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/478 (38%), Positives = 277/478 (57%), Gaps = 44/478 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF ++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLALVDDTP--GVTRDRRPGDARLGDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A S+ R T + +F+ID R+G+ PLD + RK +P++ +
Sbjct: 62 -DADKESLEGRMRRQTEEAIETADAVLFVIDARAGVTPLDAHFAEVARK---TTRPVILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E +G ES LG GDPIAISAE G G+ +LY+AL+P V+ RV
Sbjct: 118 ANKAEGRAGESGLY-----ESYSLGLGDPIAISAEHGEGLADLYDALKPHVD----RVTE 168
Query: 301 DSCTQNNSSTQDVTSPEDDE----------SKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + + +V ED E + PL++AIVGRPN GKSTL+N +L EDR+
Sbjct: 169 EEEAKREEAITNVDVDEDGEFVVEEDPVGTVERPLRVAIVGRPNAGKSTLINRMLGEDRM 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRDS+ V + ++ R + L DTAG ++ + ++ LSV + + + A VV
Sbjct: 229 LTGPEAGITRDSISVDWVWRDRHIKLFDTAGIRKKARVQEKLEKLSVADALRAIKFAEVV 288
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+ LDA ++++ ++ EGR LVV +NK DL+ R+ + +K++K+A +
Sbjct: 289 VVTLDATMSFEKQDLQIIDLVAREGRALVVAINKWDLIEDREEA--WKKIKDANERYFN- 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
Q+ G+ + S +G+G ++ V Y+ W R+ T++LNRWL KV H
Sbjct: 346 ---QIRGVQIATLSGQQGQGIDRLIESVFTAYEAWNARVSTAKLNRWLDKVTANHPPPAV 402
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + +++Y TQ K RPP FV F S + L ++ R+L SL++ F++ G PIR++ R
Sbjct: 403 AGRRVRLRYMTQPKTRPPHFVVFCSRPEQLPESYTRYLVNSLRQSFNIHGTPIRLSYR 460
>gi|149913922|ref|ZP_01902454.1| Small GTP-binding protein domain [Roseobacter sp. AzwK-3b]
gi|149812206|gb|EDM72037.1| Small GTP-binding protein domain [Roseobacter sp. AzwK-3b]
Length = 495
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/513 (36%), Positives = 285/513 (55%), Gaps = 50/513 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG AKLGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEAKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +F+ID R+G+ P D + + LRK A ++ I+
Sbjct: 62 -EATDESLQGRMRKLTERAVDMADVCLFLIDARAGVTPTDEVLAEILRKRADRV--ILGA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+P+ +SAE G GM ELY L+P +++ R
Sbjct: 119 NKAE------GSAADAGIYEAYGLGLGEPVRLSAEHGEGMNELYSLLQPISDEFEDRARA 172
Query: 301 DSCTQN---------------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
D+ + + + +PE P+Q+A+VGRPN GKSTL+N +L
Sbjct: 173 DAPETDVILDEDIEDEPDDVAGPTAARIPTPE-----RPMQVAVVGRPNAGKSTLINTIL 227
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRD++ + ++ G V + DTAG ++ + + LSV + +
Sbjct: 228 GEDRLLTGPEAGITRDAISLQIDWDGLPVRIFDTAGMRKKARVQDKVEKLSVSDGLRAVK 287
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A VV ++LDA +++R A EGR +VV VNK D+ +Q + ++E+
Sbjct: 288 FAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDDKQQK--LRDLRES-- 343
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ ++PQ+ G P+V SA G+G + V Y W R+PT++LNRWL ++ H
Sbjct: 344 --FERLLPQLRGAPLVTVSAKTGKGLDRLRDAVAKAYDVWNRRVPTAQLNRWLAGMVEAH 401
Query: 515 SWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K++Y TQ K RPP FV S L ++ R+L +L++DFD+ G PIR+
Sbjct: 402 PPPAPGGRRIKLRYMTQAKTRPPHFVVMCSHPDKLPESYSRYLVNALRQDFDMPGTPIRL 461
Query: 574 TQRSVPRKCGSSSSRQNTGQKVGRTFSDKRTVP 606
RS + S +++T ++ + + + P
Sbjct: 462 HMRSQSDRNPYKSKKKSTPSRLRKHIHGRGSQP 494
>gi|260428010|ref|ZP_05781989.1| ribosome-associated GTPase EngA [Citreicella sp. SE45]
gi|260422502|gb|EEX15753.1| ribosome-associated GTPase EngA [Citreicella sp. SE45]
Length = 487
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/475 (40%), Positives = 268/475 (56%), Gaps = 37/475 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ RR ALV + P VTRD+REG KLGDLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGRRLALVDDQP--GVTRDLREGEGKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R G+ P D + LRK + + I+A
Sbjct: 62 -EATDESLQGRMRRLTERAVDMADVCLFMIDARVGVTPTDEVFAEILRKRSKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+P+ +SAE G GM ELY L P + + R
Sbjct: 119 NKSE------GSAADAGVLEAYGLGLGEPLRLSAEHGEGMPELYSVLMPLSDGFAERAAE 172
Query: 301 DS------CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
++ ++ + D PE + K PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 173 EAPETEVELSEEDGDDIDTALPEITDKK-PLQIAVVGRPNAGKSTLINKILGEDRLLTGP 231
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ V ++ G + + DTAG +R K ++ LSV + + A VV ++L
Sbjct: 232 EAGITRDAISVRLDWDGTPMRIFDTAGMRKRAKIQEKLEKLSVSDGLRAVKFAEVVVVLL 291
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +VV VNK D+ +Q + +KEA ++PQ
Sbjct: 292 DAAIPFEQQDLRIADLAEREGRAVVVAVNKWDVEEHKQEK--LRDLKEA----FDRLLPQ 345
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + ++ ++ W R+ T +LNRWL ++ H Q +
Sbjct: 346 LRGAPLVTVSAKTGRGLDRLNAAILKAWEIWNRRVSTGQLNRWLEGMVSSHPPPAPQGKR 405
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP FV S + D+ R+L L+E FD+ G PIR+ R
Sbjct: 406 IKLRYMTQAKTRPPGFVVMCSHPDKMPDSYTRYLVNGLREAFDMPGTPIRLYMRG 460
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ LV + G+TRD + ++DTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGRRLALVDDQPGVTRDLREGEGKLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ E + + R M A V ++DA
Sbjct: 61 EEATDESLQGRMRRLTERAVDM-ADVCLFMIDA 92
>gi|400754680|ref|YP_006563048.1| GTP-binding protein EngA [Phaeobacter gallaeciensis 2.10]
gi|398653833|gb|AFO87803.1| GTP-binding protein EngA [Phaeobacter gallaeciensis 2.10]
Length = 508
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 273/473 (57%), Gaps = 34/473 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 26 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEARLGDLRFTVVDTAGLE 83
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R G+ P+D + LRK + + I+A
Sbjct: 84 -DATDNSLEGRMRRLTERAVDMADVCLFMIDARVGVTPIDQMFAEILRKKSAHV--ILAA 140
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L ++ LG G+PI +S E G G+ +LY L P +++ R +D
Sbjct: 141 NKAEGNAADAGVL-----DAWGLGLGEPIRLSGEHGEGLNDLYSQLMPLADEFEERAKDD 195
Query: 302 S-----CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
S + +D++ P +K PLQ+A+VGRPN GKSTL+N +L EDR+L GPEA
Sbjct: 196 SPEIDVALDEDDDEEDLSVPMPTRNK-PLQVAVVGRPNAGKSTLINKILGEDRLLTGPEA 254
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRD++ + ++Q + + DTAG ++ K ++ LSV + + A VV ++LDA
Sbjct: 255 GITRDAISLQIDWQDVPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDA 314
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++R A EGR +VV VNK D+ +Q + +KEA ++PQ+
Sbjct: 315 AIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDEKQEK--LRNLKEA----FDRLLPQLR 368
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
G P++ SA G+G + ++ Y W R+PT+ LNRWL ++ +H Q + K
Sbjct: 369 GAPLITVSAKTGKGLDRLHAAIMRAYDVWNRRIPTAALNRWLTGMLEQHPPPAPQGKRIK 428
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y TQ K RPP FV S + ++ R+L L++DFD+ G PIR+T RS
Sbjct: 429 LRYMTQAKTRPPGFVVMCSHPDKMPESYNRYLVNGLRQDFDMPGSPIRLTLRS 481
>gi|114704716|ref|ZP_01437624.1| GTP-binding protein [Fulvimarina pelagi HTCC2506]
gi|114539501|gb|EAU42621.1| GTP-binding protein [Fulvimarina pelagi HTCC2506]
Length = 470
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 283/488 (57%), Gaps = 38/488 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ IIGRPNVGKS LFNRL+ +R ALV + P VTRD R G +L DL F+++D+AGLE
Sbjct: 3 SIAIIGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDRRPGEGRLMDLSFEIVDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S S+ R T + ++FM+DV+SG+ P D + + R+ +I ++
Sbjct: 61 N-AHSESLSGRMREQTEEAIRIADLSLFMVDVKSGITPEDQDFAEVARRAGGKI--VLVA 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ + G L ++ LG GDP+AISAE G GM +L +AL VE + V +
Sbjct: 118 NKAEARDSDIGYL-----DAYALGLGDPVAISAEHGEGMGDLRDAL---VEALGIEVFDR 169
Query: 302 SCTQNNSSTQDVTSPEDDESKLP------LQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ + DV PEDD++ LP L++AIVGRPN GKSTL+N +L E+R+L GPE
Sbjct: 170 DAVASDEAIVDVPVPEDDDTPLPYDETKPLRMAIVGRPNAGKSTLVNRMLGEERMLTGPE 229
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRDS+ V +E++GR + DTAG ++ + ++ LSV + + L A VV +VLD
Sbjct: 230 AGITRDSISVEWEWRGRHFKIFDTAGLRRKARVQEKLEKLSVADALRALKFAEVVVIVLD 289
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+++ V+ EGR V+ NK D+ RQ L K ++E + + ++PQV
Sbjct: 290 VTIPFERQDLTIVDLIAREGRAPVIAFNKWDIAEDRQE--LAKELRE----KTERLLPQV 343
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
GI V S G G +M V+DT++ W R+ T++LN+WL + + H S +
Sbjct: 344 RGIRTVMISGETGEGLDRLMKAVVDTHRTWNSRVTTAKLNQWLERTIAHHPPPAVSGRRV 403
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
IK+ TQVK RPPTF+ + + + + R++ L++ FDL G+PIR+ R PR
Sbjct: 404 TIKFMTQVKTRPPTFMLSTTRPEAIGASYSRYIINGLRDSFDLKGVPIRLGLRK-PRNPY 462
Query: 584 SSSSRQNT 591
++ ++++
Sbjct: 463 AAKKKRSS 470
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ +AI+GRPNVGKSTL N L+ + LV + G+TRD + +VDTAG
Sbjct: 2 VSIAIIGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDRRPGEGRLMDLSFEIVDTAG 58
>gi|259419101|ref|ZP_05743018.1| ribosome-associated GTPase EngA [Silicibacter sp. TrichCH4B]
gi|259345323|gb|EEW57177.1| ribosome-associated GTPase EngA [Silicibacter sp. TrichCH4B]
Length = 492
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 281/511 (54%), Gaps = 50/511 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEARLGDLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D + LRK + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVEMADVCLFIIDARAGVTPTDEMFAEILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G+ + AG E+ LG G+PI +S E G G+ +LY L P E + +
Sbjct: 119 NKSE----GSAADAGVI-EAYGLGLGEPIRMSGEHGEGLNDLYSELLPVSEKF------E 167
Query: 302 SCTQNNSSTQDVTSPEDDESKL----------------PLQLAIVGRPNVGKSTLLNALL 345
+ + DV ED+ PLQ+A+VGRPN GKSTL+N +L
Sbjct: 168 KLAEETAPATDVVLDEDENEAFNEGEEIAATPVPTMEKPLQVAVVGRPNAGKSTLINKIL 227
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + +
Sbjct: 228 GEDRLLTGPEAGITRDAISLKIDWSGTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVK 287
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A VV ++LDA +++R A EGR +VV VNK D+ +Q K +KEA
Sbjct: 288 FAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDEKQEK--LKALKEA-- 343
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ ++PQ+ G P+V SA GRG + ++ + W R+PT+ LNRWL ++ +H
Sbjct: 344 --FERLLPQLRGAPLVTVSAKTGRGLDRLHAAIMKAHDVWNRRVPTAALNRWLAGMLEQH 401
Query: 515 -SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q + K++Y TQ K RPP FV S + + R+L L+EDFD+ G PIR+
Sbjct: 402 PPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPASYNRYLVNGLREDFDMPGTPIRL 461
Query: 574 TQRSVPRKCGSSSSRQNTGQKVGRTFSDKRT 604
T R K +++T ++ + +++
Sbjct: 462 TLRGQGDKNPYKGKKKSTPSRLRKHIEGRKS 492
>gi|126732584|ref|ZP_01748381.1| GTP-binding protein EngA [Sagittula stellata E-37]
gi|126706868|gb|EBA05937.1| GTP-binding protein EngA [Sagittula stellata E-37]
Length = 488
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 268/477 (56%), Gaps = 45/477 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG AKLGDLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGEAKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R +T + +F+ID R+GL P D + LRK A + I+A
Sbjct: 62 N-ANDDSLPARMRRLTERAVDMADVCLFLIDARAGLLPDDHVFAEILRKRAKHV--IIAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+P+ +SAE G GM +LY L P E +
Sbjct: 119 NKAE------GSAADAGVFEAFELGLGEPLRLSAEHGEGMPDLYSVLLPLAEGF------ 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKL---------PLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D+ ++ DV ++DE PLQ+A+VGRPN GKSTL+N ++ EDR+L
Sbjct: 167 DAARAGDTPETDVAVSDEDEDDDSVPMPTLARPLQIAVVGRPNAGKSTLINHIIGEDRLL 226
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRD++ + E+ G + + DTAG +R K ++ LSV + + A VV
Sbjct: 227 TGPEAGITRDAISLTHEWGGVPMRIFDTAGMRRRSKVQEKLEKLSVSDGIRAVKFAEVVV 286
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
++LDA ++++ A EGR +VV VNK D+ +Q + R ++ + V
Sbjct: 287 VLLDAAIPFETQDLKIADLAEREGRAVVVAVNKWDIEGEKQEKLKWLR------EQFEHV 340
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQ 519
+PQ+ G P+V SA G+G + V+ Y W R+ T +LNRWL ++ RH Q
Sbjct: 341 LPQLRGAPLVTVSARTGKGLDKLQEAVMKAYTVWNRRVSTGQLNRWLEAMIARHPPPAPQ 400
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQ K RPP FV S L ++ R+L L+EDFD+ G PIR+ R
Sbjct: 401 GRRIKLRYMTQAKTRPPGFVVMCSHPDKLPESYSRYLVNGLREDFDMPGTPIRLHMR 457
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ + LV + G+TRD + ++DTAG
Sbjct: 1 MSFSLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEAKLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ PA + + R M A V ++DA
Sbjct: 61 ENANDDSLPARMRRLTERAVDM-ADVCLFLIDA 92
>gi|426400895|ref|YP_007019867.1| GTP-binding domain-containing protein [Candidatus Endolissoclinum
patella L2]
gi|425857563|gb|AFX98599.1| small GTP-binding domain protein [Candidatus Endolissoclinum
patella L2]
Length = 462
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 274/472 (58%), Gaps = 38/472 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++ TV I+GRPNVGKS LFNRL ++ALV +TP +TRD REG A++ DL+F+++D+A
Sbjct: 9 MVITVAIVGRPNVGKSTLFNRLTGSKQALVDDTPG--LTRDRREGDARIADLKFRIIDTA 66
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GL+ E + S+ R T + + + +IDVR+G+ PLD+ WLRK I +
Sbjct: 67 GLD-EVQNHSLNGRIWQQTKIAIQQANMILMVIDVRAGVMPLDVHFANWLRK--TNIPIV 123
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NKCE+ N E+ LG GDPIAISAE G +LY + +++
Sbjct: 124 LLANKCETYGN-----IPVLGEAHKLGLGDPIAISAEHNNGFYKLYNTIYSRIKN----- 173
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D + + + ED+ L++AIVGRPNVGKSTL+N L++EDR+L GPEAG+
Sbjct: 174 APDLAAEYLIPSNHLKEIEDNRV---LKIAIVGRPNVGKSTLVNRLIEEDRLLTGPEAGI 230
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS++V ++Y R ++L DTAG +R K EK +S S + + A VV LV+D +
Sbjct: 231 TRDSIKVPWKYSDREIHLFDTAGLRRRAKVVEK-LERMSTADSIRAIRFAEVVILVIDGK 289
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
++ E+GR +++ VNK D++ + K+ + + ++++T + Q G
Sbjct: 290 QMLQNQDLAIANTVFEQGRSMIIAVNKWDVVPDK------KKANQHISEQLRTSLAQARG 343
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKI 525
IP + SAL G+ ++ V D Y+ W R+ TSRLN WL+ + +H + + ++
Sbjct: 344 IPWIAVSALHGKNLNKLLKAVFDIYKIWNTRIATSRLNVWLKNMTEQHPLPLSRGRRLRL 403
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQV +RPPTF AF++ L + + +L L+++F L G+PIR+ R+
Sbjct: 404 RYITQVNSRPPTFAAFINQANELPKSYVSYLIAGLRDEFGLTGVPIRLNLRT 455
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
+I+ N + + I+GRPNVGKS L NRLI E + P+ +TRD + K D
Sbjct: 190 EIEDNRVLKIAIVGRPNVGKSTLVNRLI--EEDRLLTGPEAGITRDSIKVPWKYSDREIH 247
Query: 174 VLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRK 230
+ D+AGL A L+R + TA+ + +FA I +ID + L DL + + +
Sbjct: 248 LFDTAGLRRRAKVVEKLERMS--TADSIRAIRFAEVVILVIDGKQMLQNQDLAIANTVFE 305
Query: 231 HAPQIKPIVAMNKCESL---HNGTGSLAGAAAESLMLGFGDP-IAISAETGLGMTELYEA 286
+ I+A+NK + + ++ SL G P IA+SA G + +L +A
Sbjct: 306 QGRSM--IIAVNKWDVVPDKKKANQHISEQLRTSLAQARGIPWIAVSALHGKNLNKLLKA 363
Query: 287 L 287
+
Sbjct: 364 V 364
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 320 ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDT 379
E + + +AIVGRPNVGKSTL N L + LV GLTRD ++DT
Sbjct: 6 ECAMVITVAIVGRPNVGKSTLFNRLTGSKQALVDDTPGLTRDRREGDARIADLKFRIIDT 65
Query: 380 AGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLD 414
AG L + Q++ + +A+++ +V+D
Sbjct: 66 AG-LDEVQNHSLNGRIWQQTKIAIQQANMILMVID 99
>gi|399993073|ref|YP_006573313.1| GTP-binding protein EngA [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657628|gb|AFO91594.1| GTP-binding protein EngA [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 486
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 283/500 (56%), Gaps = 34/500 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEARLGDLRFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R G+ P+D + LRK + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVDMADVCLFMIDARVGVTPIDQMFAEILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG ++ LG G+PI +S E G G+ +LY L P +++ R +D
Sbjct: 119 NKAE----GNAADAGVL-DAWGLGLGEPIRLSGEHGEGLNDLYSQLMPLADEFEERAKDD 173
Query: 302 S-----CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
S + +D++ P +K PLQ+A+VGRPN GKSTL+N +L EDR+L GPEA
Sbjct: 174 SPEIDVALDEDDDEEDLSVPMPTRNK-PLQVAVVGRPNAGKSTLINKILGEDRLLTGPEA 232
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRD++ + ++Q + + DTAG ++ K ++ LSV + + A VV ++LDA
Sbjct: 233 GITRDAISLQIDWQDVPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDA 292
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++R A EGR +VV VNK D+ +Q + +KEA ++PQ+
Sbjct: 293 AIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDEKQEK--LRNLKEA----FDRLLPQLR 346
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
G P++ SA G+G + ++ Y W R+PT+ LNRWL ++ +H Q + K
Sbjct: 347 GAPLITVSAKTGKGLDRLHAAIMRAYDVWNRRVPTAALNRWLTGMLEQHPPPAPQGKRIK 406
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS 584
++Y TQ K RPP FV S + ++ R+L L++DFD+ G PIR+T RS K
Sbjct: 407 LRYMTQAKTRPPGFVVMCSHPDKMPESYNRYLVNGLRQDFDMPGSPIRLTLRSQSDKNPY 466
Query: 585 SSSRQNTGQKVGRTFSDKRT 604
++ K+ + +R
Sbjct: 467 KGKKKAPPSKLRKHLEGRRN 486
>gi|99080832|ref|YP_612986.1| GTP-binding protein EngA [Ruegeria sp. TM1040]
gi|123077693|sp|Q1GHZ2.1|DER_SILST RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|99037112|gb|ABF63724.1| Small GTP-binding protein domain [Ruegeria sp. TM1040]
Length = 492
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 280/512 (54%), Gaps = 52/512 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEARLGDLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D + LRK + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVEMADVCLFLIDARAGVTPTDEVFAEILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+PI +S E G G+ +LY L P E +
Sbjct: 119 NKSE------GSAADAGVLEAYGLGLGEPIRMSGEHGEGLNDLYSELLPVSEKF------ 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKL----------------PLQLAIVGRPNVGKSTLLNAL 344
+ + + DV ED+ PLQ+A+VGRPN GKSTL+N +
Sbjct: 167 EKLAEETAPETDVVLDEDENEAFNAGEEIAATPVPTLEKPLQVAVVGRPNAGKSTLINKI 226
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNL 403
L EDR+L GPEAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + +
Sbjct: 227 LGEDRLLTGPEAGITRDAISLKIDWSGTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAV 286
Query: 404 MRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAV 453
A VV ++LDA +++R A EGR +V+ VNK D+ +Q K +KEA
Sbjct: 287 KFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNKWDIEDEKQEK--LKALKEA- 343
Query: 454 PQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
+ ++PQ+ G P+V SA GRG + ++ + W R+PT+ LNRWL ++ +
Sbjct: 344 ---FERLLPQLRGAPLVTVSAKTGRGLDRLHAAIMKAHDVWNRRVPTAALNRWLAGMLEQ 400
Query: 514 H-SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H Q + K++Y TQ K RPP FV S + + R+L L+EDFD+ G PIR
Sbjct: 401 HPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPASYNRYLVNGLREDFDMPGTPIR 460
Query: 573 ITQRSVPRKCGSSSSRQNTGQKVGRTFSDKRT 604
+T R K +++T ++ + +++
Sbjct: 461 LTLRGQGDKNPYKGKKKSTPSRLRKHLEGRKS 492
>gi|374574960|ref|ZP_09648056.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. WSM471]
gi|374423281|gb|EHR02814.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. WSM471]
Length = 460
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/467 (39%), Positives = 265/467 (56%), Gaps = 38/467 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 5 IAIIGRPNVGKSTLFNRLVGQKLALVDDLPG--VTRDRREGEARLGDLDFTIIDTAGLD- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
E GS+ R T +A+ F+ID R GL P D ++ RK KP++ +
Sbjct: 62 EGAKGSLTARMQEQTEAAIAQADALFFVIDARMGLTPNDSAFAEFARKAN---KPVLLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E H G++ E+ LG GDPI ISAE G G+ ELY+ALR L
Sbjct: 119 NKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGLGELYDALRE---------LMP 164
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ + D E++ + P+++AIVGRPN GKST++N LL E+R+L PEAG TRD
Sbjct: 165 EPVEEDDVEDDEPLTEEEAATRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTRD 224
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V ++GR + DTAG +R + E+ LSV + + + A VV +++DA
Sbjct: 225 SIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRFE 284
Query: 416 -EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R + EGR +V+ VNK DL+ + A+ ++A ++PQ+ G+P+V
Sbjct: 285 EQDLRIADLIEREGRAVVLAVNKWDLMESKGGGAISNLRRDA-----DHLLPQIKGVPIV 339
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S L G G +M + D Y W R+ T+ LNRW + + + S + K+ Y T
Sbjct: 340 AVSGLMGEGIDRLMQAIQDAYALWNRRVSTAALNRWFEEAVQANPPPAVSGRRLKLNYIT 399
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KARPP+FV F S + + LR+LT SL+E F+L G P+RIT R
Sbjct: 400 QTKARPPSFVLFCSRADAVPQSYLRYLTNSLREAFELPGTPVRITLR 446
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ ++AI+GRPNVGKSTL N L+ + LV G+TRD ++DTAG
Sbjct: 1 MSFKIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLDFTIIDTAGL 60
Query: 383 LQREKEKGPASLSVM-QSRKNLMRAHVVALVLDA 415
E KG + + Q+ + +A + V+DA
Sbjct: 61 --DEGAKGSLTARMQEQTEAAIAQADALFFVIDA 92
>gi|406990396|gb|EKE10057.1| hypothetical protein ACD_16C00082G0020 [uncultured bacterium]
Length = 458
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 266/466 (57%), Gaps = 46/466 (9%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
I+GRPNVGKS LFNRL +R ALV++ P VTRD++E +LGD+ +++D+AGLE E
Sbjct: 17 IVGRPNVGKSTLFNRLCGKRLALVHDLPG--VTRDVKEAFGQLGDIPLRLMDTAGLE-EK 73
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM-NK 243
T+ +++ L + +FMID R G+ D LRK KP++ + NK
Sbjct: 74 TTDRLMEGMKNQVLRALGEADVILFMIDAREGVTTRDKVFVSLLRKAK---KPVLLLANK 130
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSC 303
CE G +LA E+ GFG+P +S+E G GM LYEAL P + +
Sbjct: 131 CEG-KEGQNALA----EAWGFGFGEPFPLSSEHGQGMDTLYEALLPYYKGPL-------- 177
Query: 304 TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 363
+++ +++ PLQLAIVGRPNVGKSTLLN L+ +RVL GPEAG TRD++
Sbjct: 178 -----GAEELV---EEQKSFPLQLAIVGRPNVGKSTLLNQLVGHERVLTGPEAGTTRDAI 229
Query: 364 RVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE----- 417
+ +EY+G ++ L+DTAG +R K + L+ +S + A V LV+DA +
Sbjct: 230 TIEWEYKGESIRLIDTAGMRRRAKVTEKLEWLASTESLSAIQYAQVAILVVDATQPLEKQ 289
Query: 418 -----VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
+ ++EGR LV+ +NK DL+ +Q + + + + T +PQV GIP+V
Sbjct: 290 DLHIASQVIDEGRCLVLALNKWDLIHNKQELLTHLKAR------LTTTLPQVRGIPLVPI 343
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYFTQV 531
SAL + ++ V++ Y W R+ T++LNRWL +++ H + KIKY TQ+
Sbjct: 344 SALNDKNIGKLLDAVLEIYALWNKRISTAKLNRWLEELVTHHPPPLVVGRRVKIKYLTQI 403
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K RPPTFV F S K L D+ +R++ ++E FDL G+P+R+ RS
Sbjct: 404 KTRPPTFVLFCSKAKELPDSYVRYVANGIRESFDLKGVPLRLFVRS 449
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 322 KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
K L+LAIVGRPNVGKSTL N L + LV G+TRD + + L+DTAG
Sbjct: 10 KYGLKLAIVGRPNVGKSTLFNRLCGKRLALVHDLPGVTRDVKEAFGQLGDIPLRLMDTAG 69
Query: 382 WLQREKEKGPASLSVMQSRKN-----LMRAHVVALVLDAEE 417
++ ++ +M+ KN L A V+ ++DA E
Sbjct: 70 LEEKTTDR------LMEGMKNQVLRALGEADVILFMIDARE 104
>gi|365897836|ref|ZP_09435817.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
STM 3843]
gi|365421417|emb|CCE08359.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
STM 3843]
Length = 467
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/470 (40%), Positives = 260/470 (55%), Gaps = 46/470 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A LGDL F V+D+AGL+
Sbjct: 15 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLPG--VTRDRREGEAHLGDLAFTVIDTAGLD 72
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + F+ID R GL P D + R+ KP++ +
Sbjct: 73 -EGVKGSLTARMQEQTETAIKLADALFFVIDARVGLTPTDRAFADFARRAN---KPVLLL 128
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+A+ V
Sbjct: 129 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDAVSELVPTEPDDEDE 183
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T + + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 184 REETDEERAGR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 231
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 232 DSIAVEIDWKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 291
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ G+ Q SAL + +PQV+G+
Sbjct: 292 EEQDLRIADLIEREGRALVIAVNKWDLMDGKPGQISALR--------SDADHWLPQVSGV 343
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M ++ Y W R+PTS LNRW + + + S + K+
Sbjct: 344 PIVAVSGLMGEGIDRLMEAIVKAYAVWNKRVPTSALNRWFEQAIAANPPPAVSGRRLKLN 403
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ KARPP+FV F S + + LR+LT SL+E F+L G P+RIT R
Sbjct: 404 YITQTKARPPSFVLFCSRADAIPQSYLRYLTNSLREIFELPGTPVRITLR 453
>gi|302830428|ref|XP_002946780.1| hypothetical protein VOLCADRAFT_56252 [Volvox carteri f.
nagariensis]
gi|300267824|gb|EFJ52006.1| hypothetical protein VOLCADRAFT_56252 [Volvox carteri f.
nagariensis]
Length = 480
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 266/477 (55%), Gaps = 32/477 (6%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
++GRPNVGKSALFNRL+RRR ALVY+TP+ HVTRD +EG A+LGDL F+ D++GLE
Sbjct: 1 LVGRPNVGKSALFNRLLRRRVALVYDTPNSHVTRDYQEGRAQLGDLVFRAADTSGLEPRG 60
Query: 185 TS--GSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
S GSI R +T +L + + ++D + G+ P D EV +WL +H P+ + +V N
Sbjct: 61 GSWRGSINARATSITTALLRQCHLTLLVLDAKDGVLPADEEVAQWLLRHVPRDQVLVVAN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E + + LGFG+P+A+SA TG G+ +LY AL+P +++ ++ +
Sbjct: 121 KAEGAR-ARDEMPQTVYDCYRLGFGEPVAVSAATGEGLADLYTALQPHIDEVSEQLAAAA 179
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
++P L+L I+G PN GKSTLLN LL E+R L GPE GLTRD+
Sbjct: 180 AAAAADRPSSSSAPGRGGV---LKLGIMGLPNAGKSTLLNRLLGEERALTGPEPGLTRDA 236
Query: 363 VRVHFEYQGRTVYLVDTAGWL--QREKEKGPASLSVMQSRKNLM------------RAHV 408
VR + Y + V L+DTAGW+ R A+LS + ++L RA
Sbjct: 237 VRAMWMYGNQPVELIDTAGWIGVGRTARWAVAALSRQCTLRSLAQVHVAVLVVDVERALR 296
Query: 409 VALVLDAEEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
VL E+ + EG+ LV++ NKMD+LS Q+ LY +V+ P I P +
Sbjct: 297 SNRVLARRELSLASHVIREGKALVLVANKMDVLSP-QDRTLYGKVRN--PYGISRACPAL 353
Query: 465 -TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD--QSA 521
+PVV SA +G G +M V Y+ W R+ T+RLN ++ K+ R + ++
Sbjct: 354 PISLPVVEVSARDGTGLDEIMPVVSKAYEAWNKRIGTARLNNFMAKLTARMAGGGGTEAN 413
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKT--LSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I+Y TQ+KARPPTFVAFL G + +S FL ++E G+P+RI R
Sbjct: 414 LRRIRYVTQIKARPPTFVAFLRGTASQPVSGDFSAFLAHQIREVLGFPGVPLRIWFR 470
>gi|27379163|ref|NP_770692.1| GTP-binding protein EngA [Bradyrhizobium japonicum USDA 110]
gi|37999663|sp|Q89MZ0.1|DER_BRAJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27352313|dbj|BAC49317.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110]
Length = 460
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 264/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F++D R GL P D + R+ KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRAN---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+AL +++
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDAL--------AKLMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ ++ S E+ ++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPVEEDEDEDDAPLSEEEAATR-PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D
Sbjct: 224 DSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ NK DL+ + A+ ++A +PQV G+P+
Sbjct: 284 EEQDLRIADLVEREGRALVLAANKWDLMETKGGGAISGLRRDA-----DHWLPQVKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+ TS LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGIDRLMQAIQDAYAVWNRRVSTSALNRWFEQAVQANPPPAVSGRRLKLNYI 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT S++E FDL G P+RIT R
Sbjct: 399 TQTKARPPSFVLFCSRADAVPQSYLRYLTNSMREAFDLPGTPVRITLR 446
>gi|386395819|ref|ZP_10080597.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. WSM1253]
gi|385736445|gb|EIG56641.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. WSM1253]
Length = 460
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 184/467 (39%), Positives = 264/467 (56%), Gaps = 38/467 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 5 IAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLDFTIIDTAGLD- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
E GS+ R T +A+ F+ID R GL P D + RK KP++ +
Sbjct: 62 EGAKGSLTARMQEQTEAAIAQADALFFVIDARMGLTPNDRAFADFARKAN---KPVMLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E H G++ E+ LG GDPI ISAE G G+ ELY+ALR L
Sbjct: 119 NKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGLGELYDALRE---------LMP 164
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ + D E++ + P+++AIVGRPN GKST++N LL E+R+L PEAG TRD
Sbjct: 165 EPVEEDDVEDDEPLTEEEAATRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTRD 224
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V ++GR + DTAG +R + E+ LSV + + + A VV +++DA
Sbjct: 225 SIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRFE 284
Query: 416 -EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R + EGR +V+ VNK DL+ + A+ ++A ++PQ+ G+P+V
Sbjct: 285 EQDLRIADLIEREGRAVVLAVNKWDLMESKGGGAISNLRRDA-----DHLLPQIKGVPIV 339
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S L G G +M + D Y W R+ T+ LNRW + + + S + K+ Y T
Sbjct: 340 AVSGLMGEGIDRLMQAIQDAYALWNRRVSTAALNRWFEEAVQANPPPAVSGRRLKLNYIT 399
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KARPP+FV F S + + LR+LT SL+E F+L G P+RIT R
Sbjct: 400 QTKARPPSFVLFCSRADAVPQSYLRYLTNSLREAFELPGTPVRITLR 446
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ ++AI+GRPNVGKSTL N L+ + LV G+TRD ++DTAG
Sbjct: 1 MSFKIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLDFTIIDTAGL 60
Query: 383 LQREKEKGPASLSVM-QSRKNLMRAHVVALVLDA 415
E KG + + Q+ + +A + V+DA
Sbjct: 61 --DEGAKGSLTARMQEQTEAAIAQADALFFVIDA 92
>gi|146340695|ref|YP_001205743.1| GTP-binding protein EngA [Bradyrhizobium sp. ORS 278]
gi|166224310|sp|A4YUE1.1|DER_BRASO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146193501|emb|CAL77517.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
ORS 278]
Length = 456
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 192/484 (39%), Positives = 262/484 (54%), Gaps = 46/484 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKL DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLHDLHFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARVGLTPADRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+AL V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDALSKIVPPSDDEDDE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T +++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 REETDEERASR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L+LDA
Sbjct: 221 DSIAVEVEWKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMLDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ + Q SAL + + +PQ+TG
Sbjct: 281 EEQDLRIADLVEREGRALVLAVNKWDLMEAQPGQISALRR--------DADHWLPQITGA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M +++ Y W R+PT+ LNRW + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVEAYAVWNRRVPTAALNRWFEGAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLVNSMRETFELPGTPVRITLREKANPFAHKR 452
Query: 587 SRQN 590
R N
Sbjct: 453 KRPN 456
>gi|347736198|ref|ZP_08868898.1| GTP-binding protein EngA [Azospirillum amazonense Y2]
gi|346920386|gb|EGY01512.1| GTP-binding protein EngA [Azospirillum amazonense Y2]
Length = 462
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 258/467 (55%), Gaps = 32/467 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL ++ A+V +TP VTRD R L + V+D+AGLE
Sbjct: 8 TVAIIGRPNVGKSTLFNRLAGKKLAIVDDTP--GVTRDWRSADGYLAGIELTVVDTAGLE 65
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + +F++D R+G+ PLD WLRK I I+
Sbjct: 66 -EAFDDSLEARMRRQTERAIERADVGLFIVDARAGITPLDRHFAAWLRKGKTPI--ILVA 122
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE G + E LG GDP+ +SAE G GM +L +AL +
Sbjct: 123 NKCEGNAGKPGLM-----ECYELGLGDPVPLSAEHGEGMADLVDAL---TPYLPPDEPEE 174
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ D + D +K PLQLAIVGRPNVGKSTLLN+LL E+RVL GPEAG+TRD
Sbjct: 175 EVEEAEGPLDDEAAEARDNAK-PLQLAIVGRPNVGKSTLLNSLLGEERVLTGPEAGMTRD 233
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV-- 418
++ + ++ R V LVDTAG +R + E L+V + + + AHVV LVLDA+ +
Sbjct: 234 AIAAEWTWRDRPVKLVDTAGLRRRARVEDKLEKLAVADTLRVVRMAHVVVLVLDADAILD 293
Query: 419 --------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+ +EEGRGLV+ VNK D ++ R + + + ++T +PQV GIP +
Sbjct: 294 KQDLTIARQVIEEGRGLVIAVNKWDAVANRAEAL------QQLSDRLETSLPQVRGIPTI 347
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKYFT 529
SAL+ + ++ + Y+ W R+PT++LNRWL+ ++ H + KI+Y T
Sbjct: 348 TISALKQQKLDVLLDAAFEVYRLWNRRIPTAQLNRWLQGMLESHPPPLVDGRRLKIRYMT 407
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
QVKARPPTF F S + + R+L L+E F L +P+R R
Sbjct: 408 QVKARPPTFALFSSRPVEIPEHYTRYLINGLRETFKLPAVPLRFLLR 454
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L +AI+GRPNVGKSTL N L + +V G+TRD G + +VDTAG L+
Sbjct: 7 LTVAIIGRPNVGKSTLFNRLAGKKLAIVDDTPGVTRDWRSADGYLAGIELTVVDTAG-LE 65
Query: 385 REKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ + Q+ + + RA V ++DA
Sbjct: 66 EAFDDSLEARMRRQTERAIERADVGLFIVDA 96
>gi|39936158|ref|NP_948434.1| GTP-binding protein EngA [Rhodopseudomonas palustris CGA009]
gi|192291876|ref|YP_001992481.1| GTP-binding protein EngA [Rhodopseudomonas palustris TIE-1]
gi|81698158|sp|Q6N586.1|DER_RHOPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229784137|sp|B3Q9V3.1|DER_RHOPT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|39650013|emb|CAE28536.1| GTP-binding protein [Rhodopseudomonas palustris CGA009]
gi|192285625|gb|ACF02006.1| small GTP-binding protein [Rhodopseudomonas palustris TIE-1]
Length = 459
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 265/468 (56%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TLAIIGRPNVGKSTLFNRLVGQKLALVDDAP--GVTRDRREGEGRLGDLNFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTETAIELADALLFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ ES LG GDP+ ISAE G GM ELY+ALRP +L
Sbjct: 118 ANKSEGKSGEIGAM-----ESYALGLGDPVQISAEHGEGMGELYDALRP-----LLPEPV 167
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + + Q E+ + P+++AIVGRPN GKST +N LL E+R+L PEAG TR
Sbjct: 168 EDEEDDEPADQS----EEAIATRPIRVAIVGRPNAGKSTFINRLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 224 DSIAVEVEWKGRDFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 284 EEQDLRIADLVEREGRALVIAVNKWDLIE-RQGGQIAQLRTDA-----DHWLPQIKGVPI 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M + D Y W R+PT+ LNRW + + ++ S + K+ Y
Sbjct: 338 VATSGMLGEGVDRLMQAIQDAYAVWNRRVPTAALNRWFEQAISQNPPPAVSGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ FDL G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGAFDLPGTPVRITLR 445
>gi|456355755|dbj|BAM90200.1| GTP-binding protein EngA [Agromonas oligotrophica S58]
Length = 456
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/484 (39%), Positives = 263/484 (54%), Gaps = 46/484 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKL DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLYDLNFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARIGLTPSDRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+A+ V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDAVSKLVPPTEDEDEE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T +++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 REETDEERASR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 221 DSIAVEIEWKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ Q SAL + + +PQV G
Sbjct: 281 EEQDLRIADLIEREGRALVIAVNKWDLMDSNPGQISALRR--------DADHWLPQVAGA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M ++++Y W R+PT+ LNRW + + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVESYAVWNRRVPTAALNRWFEQAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQ KARPP+FV F S + + LR+LT S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLTNSMRETFELPGTPVRITLREKANPFAHKR 452
Query: 587 SRQN 590
R N
Sbjct: 453 KRPN 456
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N L+ + LV G+TRD + ++DTAG
Sbjct: 1 MPFTIAIIGRPNVGKSTLFNRLVGQKLALVDDMPGVTRDRREGEAKLYDLNFTIIDTAGL 60
Query: 383 LQREKEKGP-ASLSVM---QSRKNLMRAHVVALVLDA 415
++GP SL+ Q+ + A + V+DA
Sbjct: 61 -----DEGPKGSLTARMQEQTETAIALADALFFVIDA 92
>gi|344923046|ref|ZP_08776507.1| GTP-binding protein Der [Candidatus Odyssella thessalonicensis L13]
Length = 459
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 260/469 (55%), Gaps = 32/469 (6%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ + IIGRPNVGKS LFNR +R ALV++ P +TRD +E KL DL F+++D+AG
Sbjct: 1 MKKIAIIGRPNVGKSTLFNRFAGKRLALVHDMP--GMTRDRKETNGKLYDLSFRIIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L TS + R T + + +F+ID R G+ P D ++ LR+H + IV
Sbjct: 59 LADPDTS-ILTKRMFEQTQVAIEEADLVLFLIDAREGITPYDRDLANLLRRHNKPV--IV 115
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NKCE H G +E++ L G+ +AISAE G GM +LYE + P Y
Sbjct: 116 VANKCEGRHGEVGY-----SEAMGLALGEVVAISAEHGEGMYDLYEYMAP----YFQADT 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+D +N + ++ E S PL+LAI GRPN GKSTL+N L+ E+R+L G+T
Sbjct: 167 DDLEEKNEADAEESLDQEKSRSLKPLKLAIAGRPNAGKSTLINKLIGEERLLTADMPGVT 226
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RD++ + + YQGR + L+DTAG +R ++ L+VM +++++ A VV LV+DA
Sbjct: 227 RDAITIEWNYQGRPIDLIDTAGLRRRRSIDQASEKLAVMDTQRSINFAEVVILVIDATCP 286
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ EGR LV+ +NK DL++ + S L K ++E + ++ Q GIP
Sbjct: 287 FEKQDLTIAYDIISEGRALVLALNKWDLVNDK--STLLKSIQEKLDNQLT----QARGIP 340
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+ SA G+G +M V+ Y+ W R+ T +LN+WL V H + + ++KY
Sbjct: 341 CIPISAQHGKGLEKLMDAVMVIYETWNRRISTGQLNKWLSYVTENHPAPAVNGRRIRLKY 400
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ K RPPTF F S L D+ R+L +L++DF L GIPIRI R
Sbjct: 401 MTQAKTRPPTFAVFASQASQLPDSYSRYLINNLRKDFKLDGIPIRIFVR 449
>gi|91977473|ref|YP_570132.1| GTP-binding protein EngA [Rhodopseudomonas palustris BisB5]
gi|123748964|sp|Q135K8.1|DER_RHOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91683929|gb|ABE40231.1| Small GTP-binding protein domain [Rhodopseudomonas palustris BisB5]
Length = 460
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 266/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGEGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGAKGSLTARMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ ES LG GDP+ ISAE G G++ELY+ALR + +
Sbjct: 118 ANKSEGKAGEIGAM-----ESYALGLGDPVQISAEHGEGLSELYDALRALMPE------P 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D +++ +T E+D SK P+++AIVGRPN GKST +N LL EDR+L PEAG TR
Sbjct: 167 DVELEDDEEIDGLT--EEDFSKRPIRVAIVGRPNAGKSTFINRLLGEDRLLTSPEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 225 DSIAVEVNWKGRDFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDSQNRF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 285 EEQDLRIADLIEREGRALVIAVNKWDLVE-RQGGQIAQLRTDA-----DHWLPQIKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M + D Y W R+PT+ LNRW + + ++ + + K+ Y
Sbjct: 339 VATSGMLGEGVDRMMEAIQDAYAVWNTRVPTAALNRWFEQAVAQNPPPAVAGRRLKLNYV 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+L SL+ F+L G P+RI R
Sbjct: 399 TQTKARPPSFVVFCSRADAVPQSYLRYLVNSLRGVFELPGTPVRIMLR 446
>gi|114762902|ref|ZP_01442334.1| GTP-binding protein EngA [Pelagibaca bermudensis HTCC2601]
gi|114544512|gb|EAU47519.1| GTP-binding protein EngA [Roseovarius sp. HTCC2601]
Length = 487
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 271/473 (57%), Gaps = 35/473 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ RR ALV + P VTRD+REG KLGDLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGRRLALVDDQP--GVTRDLREGEGKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R G+ P D + LRK A + I+
Sbjct: 62 -DATDDSLPGRMRRLTERAVDMADVCLFMIDARVGVTPTDEIFAEILRKRAKHV--ILGA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+P+ ISAE G GM +LY AL+P + + R +
Sbjct: 119 NKSEGSAADAGVL-----EAYALGLGEPLRISAEHGEGMPDLYGALQPLADGFAERAAEE 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + S ++V S E DES PLQ+A+VGRPN GKSTL+N ++ E+R+L GPE
Sbjct: 174 APETDVSVDEEV-SEEADESLPEITATKPLQIAVVGRPNAGKSTLVNKIIGEERLLTGPE 232
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRD++ V E+ G + + DTAG ++ + ++ LSV + + A VV ++LD
Sbjct: 233 AGITRDAISVRTEWGGVPMRIFDTAGMRKKARVQEKLEKLSVSDGLRAVKFAEVVVVLLD 292
Query: 415 A------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++R A EGR +V+ VNK D+ +Q + +KE+ + ++PQ+
Sbjct: 293 AAIPFEQQDLRIADLAEREGRAVVIAVNKWDIEDEKQEK--LRDLKES----FERLLPQL 346
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQP 523
G P+V SA GRG + ++ ++ W R+ T +LNRWL ++ H Q +
Sbjct: 347 RGAPLVTVSAKTGRGLDRLQAAIMKAWEVWNRRISTGQLNRWLEGMVSSHPPPAPQGRRI 406
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ K RPP FV S + + D+ R+L L+E FD+ G PIR+ R
Sbjct: 407 KLRYMTQAKTRPPGFVVMCSRPQDMPDSYTRYLVNGLRESFDMPGTPIRLYMR 459
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ LV + G+TRD + ++DTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGRRLALVDDQPGVTRDLREGEGKLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ P + + R M A V ++DA
Sbjct: 61 EDATDDSLPGRMRRLTERAVDM-ADVCLFMIDA 92
>gi|367477532|ref|ZP_09476879.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
ORS 285]
gi|365269982|emb|CCD89347.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
ORS 285]
Length = 456
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/484 (39%), Positives = 263/484 (54%), Gaps = 46/484 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+L DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEARLHDLSFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARIGLTPADRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+A+ V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDAVSKLVPPTEDEDDE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T + + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 REETDEERAAR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR+ + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 221 DSIAVEIEHKGRSFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDSQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ + Q SAL + + +PQV G+
Sbjct: 281 EEQDLRIADLIEREGRALVIAVNKWDLMDAQPGQISALRR--------DADHWLPQVAGV 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M +++ Y W R+PT+ LNRW + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVEAYAVWNRRVPTAALNRWFEGAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQ KARPP+FV F S + + LR+LT S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLTNSMRETFELPGTPVRITLREKANPFAHKR 452
Query: 587 SRQN 590
R N
Sbjct: 453 KRPN 456
>gi|254487934|ref|ZP_05101139.1| GTP-binding protein [Roseobacter sp. GAI101]
gi|214044803|gb|EEB85441.1| GTP-binding protein [Roseobacter sp. GAI101]
Length = 491
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 276/492 (56%), Gaps = 41/492 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +FMID R G+ P DL LRK + + I+A
Sbjct: 62 -EVTDDSLQGRMRRLTERAVDMADICLFMIDARVGVTPSDLVFADILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+PI +SAE G G+ +LY L P + + RV D
Sbjct: 119 NKGEGRAADAGVL-----EAYSLGLGEPIRMSAEHGEGLNDLYTHLMPIADGFSERVDTD 173
Query: 302 SCTQNNSSTQDVTSPEDDESKLP-------LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + T++ D+++ +P LQ+A+VGRPN GKSTL+N ++ EDR+L GP
Sbjct: 174 TPETDVDLTEEEAELGDEDAPVPVPTNAKPLQVAVVGRPNAGKSTLINQIMGEDRLLTGP 233
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++G + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 234 EAGITRDAISLRTVWEGVPMRIFDTAGMRKKAKIQEKLEKLSVSDGLRAVKFAEVVVVLL 293
Query: 414 DAE------EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DAE ++R A EGR +VV VNK DL + +Q K ++E+ + ++PQ
Sbjct: 294 DAEIPFEQQDLRIADLAEREGRAVVVAVNKWDLETDKQGK--LKDLRES----FERLLPQ 347
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + + ++ Y W R+ T++LNRWL +M H Q +
Sbjct: 348 LKGAPLVTVSAKTGRGLDRLHNAIMRAYDVWNRRVTTAQLNRWLAGMMEAHPPPAPQGKR 407
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 408 IKLRYMTQAKTRPPGFVVMCSHPDKVPESYNRYLVNGLRIDFDMPGSPIRLWMR------ 461
Query: 583 GSSSSRQNTGQK 594
G S + G+K
Sbjct: 462 GQSDANPYKGRK 473
>gi|414162920|ref|ZP_11419167.1| GTPase Der [Afipia felis ATCC 53690]
gi|410880700|gb|EKS28540.1| GTPase Der [Afipia felis ATCC 53690]
Length = 459
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/468 (40%), Positives = 270/468 (57%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REGL +LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGLGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ GS+ R T +A +F+ID R+GL P D + R+ KP++ +
Sbjct: 62 S-GPRGSLTARMQEQTETAIAAADALMFVIDARAGLTPNDRAFADFARRAN---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H +G AES LG G+PI ISAE G G+++LY+AL+ D M ++
Sbjct: 118 ANKSEGKHGESG-----IAESYALGLGEPIGISAEHGEGLSDLYDALK----DLMPEPVD 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D +++ +D P P+++A++GRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 169 DEADEDDIGDEDDIDPTR-----PIRVAVLGRPNAGKSTLINHLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + + DTAG +R + + LSV + + + A VV LV+DA
Sbjct: 224 DSIAVDVEWKGRKLRVFDTAGLRRRSRIDDKLEKLSVSDALRAVRFAEVVVLVMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ R SA+ K + + ++PQV G PV
Sbjct: 284 EEQDLRLADLVEREGRALVLAVNKWDLME-RAPSAIGK-----LRESADHLLPQVRGAPV 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G ++ + Y W R+PTS LNRW + + S + K+ Y
Sbjct: 338 VAVSGLMGEGIDRLIGAIEKAYATWNKRIPTSALNRWFEQATRNNPPPAVSGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT +L+E FDL G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPQSYLRYLTNTLREAFDLPGTPVRITLR 445
>gi|407786177|ref|ZP_11133323.1| GTP-binding protein Der [Celeribacter baekdonensis B30]
gi|407201909|gb|EKE71905.1| GTP-binding protein Der [Celeribacter baekdonensis B30]
Length = 508
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/481 (39%), Positives = 273/481 (56%), Gaps = 41/481 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ RR ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGRRLALVDDQP--GVTRDLREGEARLVDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R G+ P D + LRK A + I+A
Sbjct: 62 -EATDESLQGRMRKLTERAVDMADICLFMIDARVGILPADEIFAEILRKRAKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G G L E+ LG G+P+ +SAE G GM ELY+AL P +++ R ++
Sbjct: 119 NKAEG-KAGEGGLL----EAYALGLGEPLRLSAEHGEGMHELYDALLPLSKEFDERAASE 173
Query: 302 S-CTQNNSSTQDVTSPED----DESKL--------PLQLAIVGRPNVGKSTLLNALLQED 348
+ T S ++ ED DE+ PLQ+A+VGRPN GKSTL+N LL E+
Sbjct: 174 APATDIELSEEEAALGEDFEEGDEAGFSRDFTLDKPLQIAVVGRPNAGKSTLINKLLGEE 233
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
R+L GPEAG+TRDS+ V + V + DTAG ++ K ++ LSV + + A
Sbjct: 234 RLLTGPEAGITRDSISVTMTWNDVPVRVFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAE 293
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV ++LD +++R A EGR +V+ VNK D + + N A +A+ +E
Sbjct: 294 VVVVLLDVSIPFEQQDLRIADLAEREGRAVVIAVNKWDEETDKSNKA------KALREEF 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
++PQ+ G +V SAL G+ + +++ + W R+ T++LN WL + H
Sbjct: 348 TRLLPQLRGAQLVTVSALTGKNLDKLQEAILNAHAVWNRRVSTAKLNNWLGAMTTAHPPP 407
Query: 518 DQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQVKARPP FV S + L+D+ R+L L+EDFD+ G PIR+ R
Sbjct: 408 APGGRRIKLRYMTQVKARPPQFVVMCSHPEELNDSYKRYLINGLREDFDMPGTPIRLFFR 467
Query: 577 S 577
S
Sbjct: 468 S 468
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL----VD 378
+ LAIVGRPNVGKSTL N L+ LV + G+TRD +R E + R V L +D
Sbjct: 1 MSFSLAIVGRPNVGKSTLFNRLVGRRLALVDDQPGVTRD-LR---EGEARLVDLRFTVID 56
Query: 379 TAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
TAG + E + + R M A + ++DA
Sbjct: 57 TAGLEEATDESLQGRMRKLTERAVDM-ADICLFMIDA 92
>gi|365889945|ref|ZP_09428569.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
STM 3809]
gi|365334275|emb|CCE01100.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
STM 3809]
Length = 455
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 263/489 (53%), Gaps = 57/489 (11%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKL DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLHDLHFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARIGLTPADRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+A+ V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIPISAEHGEGMGELYDAVSKLVPPADDEEER 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + ++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 EETDEERAAR-------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 219
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 220 DSIAVEIEHKGRGFRIYDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 279
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV-------IP 462
+++R + EGR LV+ VNK DL+ G+ P +I T+ +P
Sbjct: 280 EEQDLRIADLIEREGRALVLAVNKWDLMDGK-------------PGQISTLRRDADHWLP 326
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV+G+P+V S L G G +M +++ Y W R+PT+ LNRW + + S +
Sbjct: 327 QVSGVPIVAVSGLMGEGIDRLMQAIVEAYGIWNRRVPTAALNRWFEGAIADNPPPAVSGR 386
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
K+ Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 387 RLKLNYITQTKARPPSFVLFCSRADAIPQSYLRYLVNSMRETFELPGTPVRITLREKANP 446
Query: 582 CGSSSSRQN 590
R N
Sbjct: 447 FAHKRKRPN 455
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N L+ + LV G+TRD + ++DTAG
Sbjct: 1 MPFTIAIIGRPNVGKSTLFNRLVGQKLALVDDMPGVTRDRREGEAKLHDLHFTIIDTAGL 60
Query: 383 LQREKEKGP-ASLSVM---QSRKNLMRAHVVALVLDA 415
++GP SL+ Q+ + A + V+DA
Sbjct: 61 -----DEGPKGSLTARMQEQTETAIALADALFFVIDA 92
>gi|299133685|ref|ZP_07026879.1| ribosome-associated GTPase EngA [Afipia sp. 1NLS2]
gi|298591521|gb|EFI51722.1| ribosome-associated GTPase EngA [Afipia sp. 1NLS2]
Length = 461
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 192/482 (39%), Positives = 273/482 (56%), Gaps = 37/482 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REGL +LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGLGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ GS+ R T +A +F+ID R+GL P D + R+ KP++ +
Sbjct: 62 S-GPRGSLTARMQEQTETAIAAADALMFVIDARAGLTPNDRAFADFARRAN---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G AES LG GDPI ISAE G G+ +LY+ALR E + +
Sbjct: 118 ANKSEGKQGEAG-----IAESYALGLGDPIGISAEHGEGLGDLYDALR---ELMPDPIDD 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ + +D EDD ++ P+++A++GRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 170 EADEDDPDGAEDF---EDDPTR-PIRVAVLGRPNAGKSTLINHLLGEERLLTSPEAGTTR 225
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + + DTAG +R + + LSV + + + A VV LV+DA
Sbjct: 226 DSIAVDVEWKGRKLRVFDTAGLRRRSRIDDKLEKLSVSDALRAVRFAEVVVLVVDAQNRF 285
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ R SA+ K + + ++PQV G PV
Sbjct: 286 EEQDLRLADLVEREGRALVLAVNKWDLVE-RAPSAIGK-----LRETADHLLPQVRGAPV 339
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G ++ + Y W R+PTS LNRW + + S + K+ Y
Sbjct: 340 VAISGLMGEGIDRLIGAIEKAYATWNKRIPTSALNRWFEQATRNNPPPAVSGRRLKLNYV 399
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSR 588
TQ KARPP+FV F S + + LR+LT +L+E FDL G P+RIT R + R
Sbjct: 400 TQTKARPPSFVVFCSRADAVPQSYLRYLTNTLREAFDLPGTPVRITLREKANPFAHKAKR 459
Query: 589 QN 590
++
Sbjct: 460 KS 461
>gi|126739021|ref|ZP_01754715.1| GTP-binding protein EngA [Roseobacter sp. SK209-2-6]
gi|126719638|gb|EBA16346.1| GTP-binding protein EngA [Roseobacter sp. SK209-2-6]
Length = 489
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 279/501 (55%), Gaps = 35/501 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG AKLGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEAKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FM+D R+G+ P+D + LR+ + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVDMADICLFMVDARAGITPVDEVFAEILRRKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+PI +S E G GM +LY L P E + ++
Sbjct: 119 NKAE----GNAAEAGVL-EAYGLGLGEPIPLSGEHGEGMPDLYSVLMPLAEKFEAEAVDH 173
Query: 302 SCTQN-------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
S + D+ + + PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 174 SPVVDLELEEDDYWDEDDIPAAPVPTREKPLQVAVVGRPNAGKSTLINKILGEDRLLTGP 233
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 234 EAGITRDAISLQVDWSGTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 293
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +VV VNK D+ +Q + +KEA + ++PQ
Sbjct: 294 DADIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDNKQEK--LRDLKEAFGR----LLPQ 347
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P++ SA G+G + ++ Y W R+PT+ LNRWL ++ +H Q +
Sbjct: 348 LRGAPLITVSAKTGKGLERLHDAIMRAYDVWNRRIPTAALNRWLTGMLEQHPPPAPQGKR 407
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
K++Y TQ K RPP FV S + + + R+L L++DFD+ G PIR+T R K
Sbjct: 408 IKLRYMTQAKTRPPGFVVMCSHPEKIPASYTRYLVNGLRQDFDMPGSPIRLTMRGQGDKN 467
Query: 583 GSSSSRQNTGQKVGRTFSDKR 603
++ K+ + +R
Sbjct: 468 PYKGKKKAAPSKLRKHLEGRR 488
>gi|89068274|ref|ZP_01155684.1| GTP-binding protein EngA [Oceanicola granulosus HTCC2516]
gi|89046191|gb|EAR52249.1| GTP-binding protein EngA [Oceanicola granulosus HTCC2516]
Length = 488
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 187/476 (39%), Positives = 264/476 (55%), Gaps = 43/476 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +F+ID R+G+ P D LRK + + I+
Sbjct: 62 -EATDESLQGRMRRLTERAVEMADVCLFLIDARTGVTPTDEVFADILRKKSAYV--ILGA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G G L E+ LG G+PI +SAE G GM +L EALRP ++ R
Sbjct: 119 NKAEG-RAGEGGLL----EAYALGLGEPIGLSAEHGEGMADLLEALRPVAREHAGRA--- 170
Query: 302 SCTQNNSSTQDVTSPEDDESKLP---------LQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ + DV +DD +LP LQ+A+VGRPN GKSTL+N +L E+R+L
Sbjct: 171 ---EEAAPLTDVDVSDDDGEELPDWRPTEARPLQVAVVGRPNAGKSTLINRILGEERLLT 227
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA----- 406
GPEAG+TRDS+ + E++G V L DTAG +R K + LSV + + A
Sbjct: 228 GPEAGITRDSISLTLEWEGTPVRLFDTAGMRKRAKVQDKLEKLSVADGLRAVRFAEVVVV 287
Query: 407 -HVVALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V + + +++R A EGR +V+ VNK DL +Q+ R E + ++
Sbjct: 288 LLDVEIPFEQQDLRIADLAEREGRAVVIAVNKWDLEGEKQDKLRELRA------EFERLL 341
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ+ G P+V SA GRG + ++ ++ W R+PT+ LNRWL +V+ H
Sbjct: 342 PQLRGAPLVTVSARTGRGLDRLHAAILRAHETWNRRVPTAALNRWLSEVVTAHPPPAPGG 401
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQ K RPP FV S + D+ R+L L++DFD+ G PIR+ R
Sbjct: 402 RRIKLRYVTQAKTRPPGFVVMCSHPDRIPDSYSRYLVNELRDDFDMPGTPIRLFLR 457
>gi|316933671|ref|YP_004108653.1| ribosome-associated GTPase EngA [Rhodopseudomonas palustris DX-1]
gi|315601385|gb|ADU43920.1| ribosome-associated GTPase EngA [Rhodopseudomonas palustris DX-1]
Length = 458
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 265/468 (56%), Gaps = 40/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TLAIIGRPNVGKSTLFNRLVGQKLALVDDAPG--VTRDRREGEGRLGDLTFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ID R+GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTETAIEHADALLFVIDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDP+ ISAE G G+ ELY+ALRP + + + +
Sbjct: 118 ANKSEGKHGEIGAM-----ESYALGLGDPVQISAEHGEGLGELYDALRPLMPEPVDEEDD 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + + + P+++AIVGRPN GKST +N LL E+R+L PEAG TR
Sbjct: 173 DDADHSEEAI----------ATRPIRVAIVGRPNAGKSTFINRLLGEERLLTSPEAGTTR 222
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 223 DSIAVEVQWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 282
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 283 EEQDLRIADLVEREGRALVIAVNKWDLME-RQGGQIAQLRADA-----DHWLPQIKGVPI 336
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M V D Y W R+PT+ LNRW + ++ S + K+ Y
Sbjct: 337 VATSGMLGEGVDRLMQAVQDAYAVWNRRVPTAALNRWFEQATAQNPPPAVSGRRLKLNYV 396
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ F+L G P+RIT R
Sbjct: 397 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGAFELPGTPVRITLR 444
>gi|254511655|ref|ZP_05123722.1| GTP-binding protein EngA [Rhodobacteraceae bacterium KLH11]
gi|221535366|gb|EEE38354.1| GTP-binding protein EngA [Rhodobacteraceae bacterium KLH11]
Length = 487
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 190/480 (39%), Positives = 272/480 (56%), Gaps = 48/480 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEGRLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R GL P D + LRK + + I+A
Sbjct: 62 -DATDDSLQSRMRRLTERAVDMADVCLFMIDARVGLTPTDEMFAEILRKRSKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+P+ +S E G GMT+LY L P L
Sbjct: 119 NKAE------GSAADAGVLEAYNLGLGEPVRLSGEHGEGMTDLYAQLMP------LADAA 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPL-------QLAIVGRPNVGKSTLLNALLQEDRVLVG 353
Q++S DV EDDE + PL Q+A+VGRPN GKSTL+N ++ EDR+L G
Sbjct: 167 AEQAQDDSPATDVELDEDDEGEAPLITDAKPLQVAVVGRPNAGKSTLINKIMGEDRLLTG 226
Query: 354 PEAGLTRDSVRVHFEYQ----GRT-VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
PEAG+TRD++ + ++ G T + + DTAG ++ K ++ LSV + + A
Sbjct: 227 PEAGITRDAISLRVDWADPEGGSTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAE 286
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV ++LDA +++R A EGR +V+ VNK D+ +Q + +KE+
Sbjct: 287 VVVVLLDAAIPFEQQDLRIADLAEREGRAVVLAVNKWDVEDSKQEK--LRDLKES----F 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SW 516
+ ++PQ+ G P++ SA GRG + ++ + W R+PT+ LNRWL ++ +H
Sbjct: 341 ERLLPQLRGAPLITVSAKTGRGLERLRAAILRAHDVWNRRVPTAALNRWLTAMLEQHPPP 400
Query: 517 KDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + K++Y TQ K RPP FV S + D+ R+L L+EDFD+ G PIR+T R
Sbjct: 401 APQGRRIKLRYMTQAKTRPPGFVVMCSHPDKMPDSYSRYLVNGLREDFDMPGTPIRLTLR 460
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ L LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEGRLGDLRFTVIDTAG 59
>gi|418055771|ref|ZP_12693825.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
gi|353210049|gb|EHB75451.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
Length = 469
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 261/473 (55%), Gaps = 32/473 (6%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
I L P V I+GRPNVGKS LFNRL R ALV + P +TRD R+G+A++ +++D
Sbjct: 7 IPLAPVVAIVGRPNVGKSTLFNRLTGTRAALVSDLPG--LTRDRRDGIAEIFGTELRLID 64
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+AGLE EA G+I DR T +A +F+ID R+G+ D + R+ K
Sbjct: 65 TAGLE-EARQGTIADRMRKQTEQAIAAADLVLFVIDARAGVTAADSSFARIARQSG---K 120
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P+V + NK E G L ++ LG G PIAISAE G G+ +L + ++ +
Sbjct: 121 PVVLVANKAEGRQGTDGVL-----DAFSLGLGAPIAISAEHGEGIGDLAADIVAALGLKI 175
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + D P E P+++AIVGRPN GKSTL+NALL EDR++ GPE
Sbjct: 176 PKTAKKGRDHDAEPVDDKKLPP--ERPRPIRVAIVGRPNAGKSTLVNALLGEDRMITGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLD 414
GLTRDSV +Y+G+++ L DTAG ++ K A L+ + + + A VV L++D
Sbjct: 234 PGLTRDSVASELDYKGQSILLFDTAGLRRKAKITETAEKLAASDAVRAIRFAEVVVLLID 293
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AE R EEGR LVV +NK DL+ +Q + + +K+ V + + QV
Sbjct: 294 AEHPFEHQDLTIGHRVTEEGRALVVAINKWDLIPEKQKT--LRDLKKTVAESLA----QV 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
+PVV SA G +M +I T+ W R+ T +LNRWL + + RH+ + +
Sbjct: 348 PNVPVVAISARSESGLDQLMSAIIKTHATWNRRVSTPQLNRWLEEALSRHAPPAAAGKRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI+Y TQ RPPTFVAF L + L++LT SL+E FDL G+PIR + R
Sbjct: 408 KIRYVTQPSTRPPTFVAFCQRADALPKSYLKYLTNSLREAFDLPGVPIRFSLR 460
>gi|115525346|ref|YP_782257.1| GTP-binding protein EngA [Rhodopseudomonas palustris BisA53]
gi|122295592|sp|Q07LA7.1|DER_RHOP5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115519293|gb|ABJ07277.1| small GTP-binding protein [Rhodopseudomonas palustris BisA53]
Length = 460
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 261/467 (55%), Gaps = 36/467 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTPG--VTRDRREGEGRLGDLEFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ +R T + +F+ D R+GL P D + R+ + I+
Sbjct: 62 -EGAKGSLTERMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRANKPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ ES LG GDP+ ISAE G G++ELY+A R ++ +
Sbjct: 119 NKSEGKAGEIGAM-----ESYALGLGDPVQISAEHGEGLSELYDAFRA--------LMPE 165
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ E++ SK P+++AIVGRPN GKST++N LL E+R+L PEAG TRD
Sbjct: 166 PDEEAEEDDDVEGLTEEEFSKRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTRD 225
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V +Y+GR + DTAG +R + E+ LSV + + + A VV L+LDA
Sbjct: 226 SIAVSVDYKGRQFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMLDAQTKFE 285
Query: 416 -EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R + EGR LV+ VNK DL+ R + A+ E +PQV G+P+V
Sbjct: 286 EQDLRIADLIEREGRALVIAVNKWDLVE-RHPGQI-----GALRTEADHWLPQVKGVPIV 339
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S L G G +M + D+Y W R+PT+ LNRW + + + S + K+ Y T
Sbjct: 340 AVSGLMGEGIDRLMSAIEDSYATWNRRVPTAALNRWFEQAIQTNPPPAVSGRRLKLNYVT 399
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KARPP+F+ F S + ++ LR+L SL+ F+L G P+RI R
Sbjct: 400 QAKARPPSFIVFCSRADAVPESYLRYLVNSLRNYFELPGTPVRIMLR 446
>gi|390448185|ref|ZP_10233808.1| GTP-binding protein Der [Nitratireductor aquibiodomus RA22]
gi|389666824|gb|EIM78268.1| GTP-binding protein Der [Nitratireductor aquibiodomus RA22]
Length = 476
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 274/477 (57%), Gaps = 44/477 (9%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
IIGRPNVGKS LFNRL RR A+V +TP VTRD R A+L DL+F+V+D+AGLE+ A
Sbjct: 7 IIGRPNVGKSTLFNRLAGRRLAIVDDTP--GVTRDRRSHPARLQDLKFEVIDTAGLES-A 63
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM-NK 243
+ ++ R T + + A+FMID R+G+ P D LR+ KP+V + NK
Sbjct: 64 AAPTLEGRMRAQTEQAIDEADIALFMIDARAGVMPDDATFANLLRRSG---KPVVLVANK 120
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLNDS 302
+ +G L ++ LG GDP+ +SAE GLGM++L +A+ ++ ED R L +
Sbjct: 121 MDVNAARSGVL-----DAWELGLGDPVEVSAEHGLGMSDLRDAIVEALGED---RALAEE 172
Query: 303 CTQNNSSTQDVTSPEDDE----------SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+T ++T ED E S PL++AIVGRPNVGKSTL+NALL E+R+L
Sbjct: 173 PEDTVVTTDEITVGEDIEPDSEEEAVYDSSKPLRIAIVGRPNVGKSTLINALLGEERMLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GR + L DTAG ++ + ++ LSV + + A VV +
Sbjct: 233 GPEAGITRDSISVDWQWRGRKIKLFDTAGMRRKARVQEKLEKLSVSDGLRAVRFAEVVIV 292
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ + EGR V+ NK DL+ RQ + K A ++
Sbjct: 293 VFDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQETLAELHEKTA------RLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V SA GRG +M V T++ W R+ T RLNRWL G+H +
Sbjct: 347 PQVRGLQAVPISAETGRGFDKLMEAVEKTHRTWNSRISTGRLNRWLEGATGQHPPPAVAG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+K RPP FV S + + + +R+L L+E F+L G+PIR+ R+
Sbjct: 407 RRLKVKYITQIKTRPPGFVVSCSRPEAMPQSYVRYLMNGLRETFNLYGVPIRVALRT 463
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS L N L+ E + P+ +TRD + + K+ D+AG+
Sbjct: 207 IAIVGRPNVGKSTLINALL--GEERMLTGPEAGITRDSISVDWQWRGRKIKLFDTAGMRR 264
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPL---DLEVGKWLRKHAPQIKPIV 239
+A L++ + ++ L +FA +I V P DL++ + + P++
Sbjct: 265 KARVQEKLEKLS--VSDGLRAVRFAEVVIVVFDATIPFEKQDLQIADLIIREGR--APVI 320
Query: 240 AMNKCESLHNGTGSLAGAAAESLML-----GFGDPIAISAETGLGMTELYEALRPSVEDY 294
A NK + + + +LA ++ L G + ISAETG G +L EA+ + +
Sbjct: 321 AFNKWDLIEDRQETLAELHEKTARLLPQVRGL-QAVPISAETGRGFDKLMEAVEKTHRTW 379
Query: 295 MLRV 298
R+
Sbjct: 380 NSRI 383
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +LAI+GRPNVGKSTL N L +V G+TRD Q ++DTAG
Sbjct: 1 MAFKLAIIGRPNVGKSTLFNRLAGRRLAIVDDTPGVTRDRRSHPARLQDLKFEVIDTAGL 60
Query: 383 LQREKEKGPASLSVM--QSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVI 430
E P M Q+ + + A + ++DA ++ G+ +V++
Sbjct: 61 ---ESAAAPTLEGRMRAQTEQAIDEADIALFMIDARAGVMPDDATFANLLRRSGKPVVLV 117
Query: 431 VNKMDLLSGR 440
NKMD+ + R
Sbjct: 118 ANKMDVNAAR 127
>gi|154246486|ref|YP_001417444.1| GTP-binding protein EngA [Xanthobacter autotrophicus Py2]
gi|238686724|sp|A7IIE4.1|DER_XANP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|154160571|gb|ABS67787.1| small GTP-binding protein [Xanthobacter autotrophicus Py2]
Length = 458
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 269/476 (56%), Gaps = 50/476 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F+++D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDARLGDLSFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + +FMID R GL P D +RK KP++ +
Sbjct: 62 -EADAASLEGRMRAQTEAAIGHADAILFMIDARIGLTPTDRAFADLVRKCG---KPVILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--------RPSVE 292
NK E G+L E+ LG G P+ SAE G G+++LY+A+ RP E
Sbjct: 118 ANKSEGRGGEAGTL-----EAFALGLGTPLPFSAEHGEGLSDLYDAICDALPEQTRPEPE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ ++ T V DD+ + P+++ ++GRPN GKSTL+N LL EDR+L
Sbjct: 173 E-----------DEDADTDFVEEEADDKPRRPIKVTVLGRPNAGKSTLINRLLGEDRLLT 221
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V Y G + + DTAG +R + E LS + + + A VV L
Sbjct: 222 GPEAGITRDSISVEVTYAGAKLEVFDTAGLRKRARIEDKLEKLSAADALRAMKFAEVVVL 281
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA +++R + EGR LV+ NK DL++ L R++E ++ ++
Sbjct: 282 LVDATHPFEEQDLRIADLVAREGRALVIGYNKSDLVA---RGGLITRLRE----DVDRLL 334
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+P+V S L G G ++ + ++ W R+ T+ LNR+L++V H S
Sbjct: 335 PQVKGVPIVPVSGLMGHGLDKLVAAISSAHKVWNKRVATNPLNRFLQQVTDNHPPPAVSG 394
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQ KARPP+FV F S + ++ +R+L L+E FDL G+PIR+T R
Sbjct: 395 RRIKLRYMTQPKARPPSFVLFCSRTDAVPESYIRYLVNGLRETFDLPGVPIRLTLR 450
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ + LV G+TRD + +VDTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGDARLGDLSFRIVDTAGL 60
Query: 383 LQREKEKGPASLS---VMQSRKNLMRAHVVALVLDA 415
+E ASL Q+ + A + ++DA
Sbjct: 61 ----EEADAASLEGRMRAQTEAAIGHADAILFMIDA 92
>gi|328544034|ref|YP_004304143.1| GTP-binding protein engA [Polymorphum gilvum SL003B-26A1]
gi|326413778|gb|ADZ70841.1| GTP-binding protein engA [Polymorphum gilvum SL003B-26A1]
Length = 472
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 275/473 (58%), Gaps = 35/473 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R G A+LGDLRF V+D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLALVDDTP--GVTRDRRPGEARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A + S+ R T +A+ +F+ID RSG+ PLD + R+ +P++ +
Sbjct: 62 -DADATSLEGRMRAQTEEAIAEADVVLFVIDARSGVTPLDSHFAEVARRSD---RPVILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G L A A LG GDP+AISAE G G+ +LYEAL P VE
Sbjct: 118 ANKAEG-RAGEGGLYDAFA----LGLGDPVAISAEHGEGLADLYEALLPYVERVEEEEAA 172
Query: 301 DSCTQ---NNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + + + PE + PL++AIVGRPN GKSTL+N ++ E+R+L GPE
Sbjct: 173 RDEARIGIDLDESGEAIEPETPAGTRERPLRVAIVGRPNAGKSTLINRMIGEERMLTGPE 232
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRDS+ V + ++ V L DTAG ++ + ++ LSV + + + A VV + LD
Sbjct: 233 AGITRDSISVDWLWRDHHVKLFDTAGIRRKARVQEKLEKLSVADALRAIKFAEVVVVTLD 292
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A ++++ ++ EGR LV+ +NK DL+ R+ A ++ +++A + + Q+
Sbjct: 293 ATNAFEKQDLQIIDLVAREGRALVIAINKWDLVEDRE--AAWQAIRDAQDRYLN----QI 346
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQP 523
G+ + S ++G+G +M V Y W R+ T+RLNRWL V+ H Q +
Sbjct: 347 RGVQIATISGIQGQGIDRLMEAVFTAYDVWNTRISTARLNRWLDGVLAHHPPPAVQGRRV 406
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+++Y TQ K RPP FV F S + L ++ R+L +L++ FD+ G PIR++ R
Sbjct: 407 RLRYMTQAKTRPPHFVVFCSRPEELPESYTRYLVNTLRDKFDMPGTPIRLSYR 459
>gi|407774445|ref|ZP_11121743.1| GTP-binding protein Der [Thalassospira profundimaris WP0211]
gi|407282487|gb|EKF08045.1| GTP-binding protein Der [Thalassospira profundimaris WP0211]
Length = 511
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 265/512 (51%), Gaps = 74/512 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+LGD+ F ++D+AGLE
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRYGKARLGDMSFDIIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
EA S+ + + A+F+ID R+GL PLD WLRK KP+ V
Sbjct: 62 EAFDNSVEGMMRQQSEKAFEECDVALFLIDARAGLTPLDNHFADWLRKRE---KPVYVIA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM--LRVL 299
NK E G E+ LG GD ISAE GLG+ LY+ L P +++ R+
Sbjct: 119 NKHEGRDQDPGLY-----EAYGLGLGDVAPISAEHGLGIELLYDMLEPHWKEWKDRERIA 173
Query: 300 NDSCTQNNSSTQDVTSPE--------------DDESKL---------------------- 323
+ D + DDE ++
Sbjct: 174 RQHAREAAQEALDEARADSLADEDFDDEDGFADDEGEVFPSYEIEFSEDDEDEDGELIVE 233
Query: 324 ------PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLV 377
+QLAIVGRPN GKSTLLN LL E+RV+ GP+AGLTRDS+ V + Y+GR + LV
Sbjct: 234 GARDNSKIQLAIVGRPNAGKSTLLNQLLGEERVMTGPQAGLTRDSIAVDWSYEGRPIRLV 293
Query: 378 DTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRG 426
DTAG +++K + LSV + + + A VV L++DA +EEGR
Sbjct: 294 DTAGMRRKKKIDDRVEKLSVADTLRVIRYAQVVVLMIDATNTLDKQDLTIARMVLEEGRA 353
Query: 427 LVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQ 486
L++ VNK D + + K V + + ++ T Q GIPV+ SAL GRG +M
Sbjct: 354 LIIAVNKWDAIIDK------KGVMQELRDKLDTSFAQAKGIPVLTFSALTGRGTDRLMPT 407
Query: 487 VIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGK 545
V+D + W R+PTS+LNRWL RH S + +++Y TQ K+RPP+F S
Sbjct: 408 VLDIHDIWSRRIPTSQLNRWLEATTERHLPPVISGRRIRLRYMTQAKSRPPSFFINCSKA 467
Query: 546 KTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
L ++ R+L L+EDFD+ G+PIRI RS
Sbjct: 468 AELPESYTRYLINGLREDFDMPGVPIRIYLRS 499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L++AI+GRPNVGKSTL N L+ + LV + G+TRD + ++DTAG
Sbjct: 1 MSLKVAIIGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRRYGKARLGDMSFDIIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
L+ + + QS K V ++DA
Sbjct: 60 LEEAFDNSVEGMMRQQSEKAFEECDVALFLIDA 92
>gi|158425952|ref|YP_001527244.1| GTP-binding protein EngA [Azorhizobium caulinodans ORS 571]
gi|172047845|sp|A8HVL5.1|DER_AZOC5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158332841|dbj|BAF90326.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
Length = 453
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 270/468 (57%), Gaps = 42/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG A+LGDL F+++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDARLGDLAFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVA 240
EA + S+ R T + +F+ID R GL P D R+ KP I+
Sbjct: 62 -EADADSLEGRMRAQTETAIGDADALLFLIDARVGLTPTDRAFASLARRSG---KPTILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G AGA E+ LG G P+ +SAE G G+++LY+A+ ++
Sbjct: 118 ANKSE----GRGGEAGAM-EAYELGLGAPVPLSAEHGEGLSDLYDAICEALP-------- 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ T ++ E + ++ P+++A++GRPN GKSTL+N LL EDR+L GPEAG+TR
Sbjct: 165 -AQTAPQEEDEETEEAEANPNR-PIKVAVIGRPNAGKSTLINRLLGEDRLLTGPEAGITR 222
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V + GR + + DTAG +R + E LS + + + A VV +++DA
Sbjct: 223 DSISVEVTWNGRALEVFDTAGLRKRARIEDKLEKLSAADALRAMKFAEVVVVLMDATKPF 282
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R V EGR LV+ NK DL+ A + R++E E +PQV G+P+
Sbjct: 283 EEQDLRIADLVVREGRALVLGYNKSDLV----GPAAFSRLRE----EADHWLPQVKGVPI 334
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L GRG ++ + TY W R+PT+ LNR+L++ H S + KI+Y
Sbjct: 335 VPLSGLTGRGLDKLVEAIAATYAVWNTRIPTNPLNRYLQEATDSHPPPAVSGRRVKIRYM 394
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + L ++ LR++T L+E F L G+PIR+T R
Sbjct: 395 TQPKARPPSFVLFCSRPEALPESYLRYITNGLREAFSLPGVPIRLTLR 442
>gi|407781380|ref|ZP_11128599.1| GTP-binding protein Der [Oceanibaculum indicum P24]
gi|407208263|gb|EKE78189.1| GTP-binding protein Der [Oceanibaculum indicum P24]
Length = 473
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 272/479 (56%), Gaps = 45/479 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL ++ A+V +TP VTRD RE +LG LRF+++D+AG E
Sbjct: 5 TIAIVGRPNVGKSTLFNRLAGKQLAIVEDTP--GVTRDWREAAGQLGPLRFRLIDTAGYE 62
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ S+ R T + + + ++D R+GL PLD + LRK + +P+V +
Sbjct: 63 -DSYDDSLPARMRQQTERAIEEADLTLMVVDARAGLTPLDETFARLLRKGS---RPVVLV 118
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NKCE G L E+ LG GDPI SA+ G+G+++LY+A + ++M
Sbjct: 119 ANKCEGRAGEPGLL-----EAYALGLGDPIPFSAQHGIGLSDLYDA----IVEHMPEEEP 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLP-----------LQLAIVGRPNVGKSTLLNALLQEDR 349
+ Q + + ED E L +Q+AIVGRPN GKSTL+N LL +R
Sbjct: 170 EDEEQPQTEPGLTVTGEDGEEVLDGDLLPDDAPRIIQMAIVGRPNAGKSTLVNRLLGVER 229
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
+L GPEAG+TRD++ +EY+GR V LVDTAG ++ + ++ LSV + +++ AHV
Sbjct: 230 MLTGPEAGITRDAIATDWEYEGRPVRLVDTAGMRRKARIDEKLEQLSVQDTLRSIRYAHV 289
Query: 409 VALVLDAEE---------VRAV-EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V L+LDAE R V EEGR LV+ NK D ++ ++ + R ++
Sbjct: 290 VVLMLDAELGMDKQDLTIARMVEEEGRALVIAFNKWDAVADKETALADLR------DRLE 343
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
T + QV G+PVV SAL+GR +M V Y W R+ T++LNRWL ++ H
Sbjct: 344 TSLSQVKGVPVVTLSALKGRNLDRLMAAVFQVYDTWNRRISTAQLNRWLAGLLEMHPPPL 403
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + K++Y TQ+K RPPTF + S + L + R+L L++DFD+ G+P+R+ R
Sbjct: 404 VAGRRLKLRYMTQIKTRPPTFAIWASRPEELPGSYQRYLVNGLRQDFDMPGVPVRVYLR 462
>gi|119385154|ref|YP_916210.1| GTP-binding protein EngA [Paracoccus denitrificans PD1222]
gi|166225834|sp|A1B4S0.1|DER_PARDP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119374921|gb|ABL70514.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
Length = 489
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/472 (39%), Positives = 266/472 (56%), Gaps = 34/472 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAGRLGDLRFIVVDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R +T + + +F+ID R G+ D LR+ A + I+A
Sbjct: 62 I-AEDDSLQGRMRRLTERAVDEADVCLFVIDARVGVTAADEYFADILRRRARHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G AGA E+ LG G+P+ ISAE G GM +LY AL P E + + +
Sbjct: 119 NKAE----GRAGEAGAM-EAYALGLGEPLRISAEHGEGMDDLYRALVPLAEAFEAQNVQ- 172
Query: 302 SCTQNNSSTQDVTSPEDD----ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + + +D +D ESK PLQ+A++GRPN GKSTL+N +L EDR+L GPEAG
Sbjct: 173 QAPETDVAVEDGDDETEDWRPSESK-PLQIAVIGRPNAGKSTLINKILGEDRLLTGPEAG 231
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ V + G V + DTAG ++ + LSV + + A VV ++LD
Sbjct: 232 ITRDSISVSTNFMGTPVRIFDTAGMRKKARVTDKVEKLSVADGLRAVRFAEVVVVLLDVG 291
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++R A EGR +VV NK DL + K ++EA + ++PQ+ G
Sbjct: 292 IPFEQQDLRIADFAETEGRAVVVAANKWDLEEDKPEK--LKELREA----FERLLPQLKG 345
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
P+V SA G+G + + ++ ++ W R+PT+RLN+WL + H + ++
Sbjct: 346 APLVTVSARTGKGLDRLHNAILKAHEVWNRRIPTARLNQWLSTMTEAHPPPAPGGRRIRL 405
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQVK RPP FV + L D+ R+L L++DFD+ G PIR+T R
Sbjct: 406 RYITQVKTRPPAFVVMATHTDKLPDSYQRYLVNGLRQDFDMPGTPIRLTFRD 457
>gi|385233353|ref|YP_005794695.1| GTPase [Ketogulonicigenium vulgare WSH-001]
gi|343462264|gb|AEM40699.1| GTPase, putative [Ketogulonicigenium vulgare WSH-001]
Length = 489
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 265/477 (55%), Gaps = 42/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGQARLGDLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R G+ P D LR+ + I+A
Sbjct: 62 -EATDDSLQGRMRRLTERAVEMADVCLFMIDARVGITPTDQVFADILRRKNANV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+PI +SAE G GM EL AL P V + + D
Sbjct: 119 NKSEGRAGEGGYL-----EAYSLGLGEPIRLSAEHGEGMNELLYALYPIVSE-----IED 168
Query: 302 SCTQNNSSTQDV-TSPEDDE--------SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ + DV S ED E + PLQ+A++GRPN GKSTL+N ++ E+R+L
Sbjct: 169 LREEASVPETDVDVSDEDAEEGAFRMPTTARPLQIAVIGRPNAGKSTLINQIIGEERLLT 228
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRD++ + FE+ G + + DTAG +R K + LSV + + A VV L
Sbjct: 229 GPEAGITRDAISLPFEWDGVPMRIFDTAGMRKRAKIQDKLEKLSVSDGLRAVRFAEVVVL 288
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+LDA +++R A EGR +VV VNK DL +Q + + + ++
Sbjct: 289 LLDASIPFEQQDLRIADLAEREGRAVVVAVNKWDLEEDKQAKL------AGLIEAFERLL 342
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ+ G P+V SA GRG + ++ Y+ W R+ T +LNRWL + H
Sbjct: 343 PQLRGAPLVTVSARTGRGLDRLHGAIMKAYEMWNRRVTTGQLNRWLLGMTEAHPPPAPGG 402
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQVK RPP FV S + + ++ R+LT L+E F++ G PIR+T R
Sbjct: 403 RRIKMRYATQVKTRPPAFVVMTSHPEHVPESYKRYLTNGLREAFNMPGTPIRLTLRD 459
>gi|420239674|ref|ZP_14743972.1| ribosome-associated GTPase EngA [Rhizobium sp. CF080]
gi|398079228|gb|EJL70096.1| ribosome-associated GTPase EngA [Rhizobium sp. CF080]
Length = 475
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/474 (39%), Positives = 275/474 (58%), Gaps = 40/474 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLIDLKFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + +F++D + GL PLD G+ LR+ KP+V +
Sbjct: 62 -EAGPETLEGRMRAQTEAAVDDADLTLFVVDAKFGLTPLDKTFGELLRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS AG ++ LG G+P+ ISAE G GM +L +A+ ++ +
Sbjct: 118 ANKSEA----RGSDAGFY-DAYTLGLGEPVPISAEHGQGMIDLRDAIVEALGEERAFPEA 172
Query: 301 DSCTQNNSSTQDV---------TSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D + N +D PE DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 DDEAETNIDVRDSDFADEGDEEVEPEYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V +E++GRT+ + DTAG ++ + ++ LSV + +++ A V
Sbjct: 232 TGPEAGITRDSISVEWEWRGRTIKMFDTAGMRKKARVQEKLEKLSVADALRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + +
Sbjct: 292 IVFDATIPFEKQDLQLVDLVLREGRAAVLAFNKWDLVEDTQ--AVLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ G+ V S G G +M +IDT + W R+ T+RLNRWL V +H S
Sbjct: 346 LPQARGLRAVPISGQTGYGLDKLMQSIIDTDKVWNKRISTARLNRWLDGVQTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY TQVKARPP F+ + L ++ +R+L L+ DFD+ G+PIR+
Sbjct: 406 GRRLKLKYMTQVKARPPAFMVSCTRPDALPESYIRYLINGLRADFDIPGVPIRM 459
>gi|86749568|ref|YP_486064.1| GTP-binding protein EngA [Rhodopseudomonas palustris HaA2]
gi|123004191|sp|Q2IXA7.1|DER_RHOP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86572596|gb|ABD07153.1| GTP-binding protein [Rhodopseudomonas palustris HaA2]
Length = 459
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 182/468 (38%), Positives = 259/468 (55%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGEGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGAKGSLTARMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G++ ES LG GDP+ ISAE G G++ELY+ALR +
Sbjct: 118 ANKSEGKAGGIGAM-----ESYALGLGDPVQISAEHGEGLSELYDALR---------AIM 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + E+D SK P+++AIVGRPN GKST +N LL EDR+L PEAG TR
Sbjct: 164 PEPEVEDDDEEIDGLTEEDFSKRPIRVAIVGRPNAGKSTFINRLLGEDRLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 224 DSIAVEVNWKGREFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDSQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ + R + +PQV G+P+
Sbjct: 284 EEQDLRIADLIEREGRALVIAVNKWDLVEQQGGQIAQLRA------DADHWLPQVRGVPI 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G ++ + D Y W R+ T+ LNRW + + ++ + + K+ Y
Sbjct: 338 VATSGMLGEGVDRLIDAIQDAYAVWNTRVSTAALNRWFEQAVAQNPPPAVAGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ F L G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGVFKLPGTPVRITLR 445
>gi|359408473|ref|ZP_09200942.1| ribosome-associated GTPase EngA [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676448|gb|EHI48800.1| ribosome-associated GTPase EngA [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 476
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 268/478 (56%), Gaps = 39/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL R A+V + P VTRD REG +L ++RF+++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLTGTRHAIVDDQP--GVTRDRREGDGRLAEMRFRLIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A SGS+ DR T + + + +ID R+GL P DL + +R+ + +V
Sbjct: 62 -KAKSGSLEDRMRQQTELAVQQADITLLVIDARAGLLPDDLYFARQIRRSGTPV--VVLA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL-- 299
NKCE +G +LA E+ LG G + +SA G G+++LY+A+ L
Sbjct: 119 NKCEG-KSGVETLA----EAWQLGLGAAVPVSAAHGDGLSDLYDAILEQARQQGLEPALF 173
Query: 300 -NDSCTQNNSSTQDVTSPEDDESKL--------PLQLAIVGRPNVGKSTLLNALLQEDRV 350
D T + + +DE + P+++A+VGRPN+GKSTL+NALL E R+
Sbjct: 174 GEDEAESEQDETDVLAADSEDEPDIWIDEAAYDPIRIAVVGRPNMGKSTLVNALLGEQRL 233
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRD++ + F +QG+ LVDTAG ++ + + L V +++ + A V
Sbjct: 234 LTGPEAGITRDAITLPFAWQGQNYQLVDTAGIRRQARVTEKVERLMVNDAQRAIQYARVC 293
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
L+LDA + + +EGR LV+ N D ++ +Q + + + ++T
Sbjct: 294 VLMLDARQPPHRQDMVIARQITDEGRALVIAANMWDDVADKQAAM------QLINDRLET 347
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ QV G+PVV S L GRG +M + DT++ W R+ T RLNRWL ++ H
Sbjct: 348 SLAQVRGVPVVPISGLYGRGLDRLMKTIEDTHKLWNTRISTGRLNRWLEPMLEAHPPPMS 407
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + +I+Y TQV+ RPPTF F S L ++ LR+L L+ DF LGGIPIR+ R
Sbjct: 408 QGRRLRIRYMTQVRTRPPTFALFASRPVDLPESYLRYLIGGLRADFGLGGIPIRMLLR 465
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ + LAIVGRPNVGKSTL N L +V + G+TRD L+DTAG
Sbjct: 1 MTVTLAIVGRPNVGKSTLFNRLTGTRHAIVDDQPGVTRDRREGDGRLAEMRFRLIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
L++ K Q+ + +A + LV+DA
Sbjct: 60 LEKAKSGSLEDRMRQQTELAVQQADITLLVIDA 92
>gi|395785843|ref|ZP_10465571.1| GTPase Der [Bartonella tamiae Th239]
gi|423717262|ref|ZP_17691452.1| GTPase Der [Bartonella tamiae Th307]
gi|395424301|gb|EJF90488.1| GTPase Der [Bartonella tamiae Th239]
gi|395427477|gb|EJF93568.1| GTPase Der [Bartonella tamiae Th307]
Length = 475
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 273/482 (56%), Gaps = 48/482 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R ALV +TP VTRD R A+L DLRF V+D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGQRLALVDDTP--GVTRDRRMHSARLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A S+ R T + + +F++D +SG+ P DL +RK I I+
Sbjct: 62 -DADDHSLEGRMRTQTKMAIEEADLILFVLDAKSGMTPNDLNFASLVRKSGKPI--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---------- 291
NK E+ G ++ LG G+P ISAE GLGM++L +A+ +V
Sbjct: 119 NKAEAKEATAGFY-----DAWSLGLGEPCPISAEHGLGMSDLRDAIVEAVGEDKAFEKEL 173
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQE 347
E+ +R+ Q S D+ PE +E P+++AI GRPNVGKSTL+N ++ +
Sbjct: 174 EEERIRI------QPPSIGDDIDDPEAEEPAYDNTKPIRIAIAGRPNVGKSTLINTMVGQ 227
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRA 406
DR+L GPEAG+TRDS+ V +E++GR V L DTAG ++ K +G LSV + + + A
Sbjct: 228 DRLLTGPEAGVTRDSISVDWEWRGRKVKLFDTAGLRRKAKVQGKLEKLSVADTLRAIRFA 287
Query: 407 HVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV +V DA ++++ + EGR ++ NK DL+ RQ + + + ++
Sbjct: 288 EVVIIVFDATIPFEKQDLQIADLVIREGRAPIIAFNKWDLIEDRQQTLI------DLHEK 341
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
++PQV G+ + S G+G +M + + ++ W R+ T +LNRWL +GRH
Sbjct: 342 CARLLPQVRGLRALPLSGEHGQGIDRLMENIENVHKVWNRRISTGKLNRWLEGAVGRHPP 401
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
S + KIKY TQVK RPP FV S + + LR+LT +L++ FD+ G+PIR++
Sbjct: 402 PAVSGRRLKIKYMTQVKTRPPGFVISGSRPDAMPQSYLRYLTNALRDRFDMPGVPIRLSM 461
Query: 576 RS 577
R+
Sbjct: 462 RT 463
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L +AI+GRPNVGKSTL N L+ + LV G+TRD Q ++DTAG
Sbjct: 1 MSLTVAIIGRPNVGKSTLFNRLVGQRLALVDDTPGVTRDRRMHSARLQDLRFDVIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L+ + Q++ + A ++ VLDA+
Sbjct: 60 LEDADDHSLEGRMRTQTKMAIEEADLILFVLDAK 93
>gi|83945266|ref|ZP_00957615.1| GTP-binding protein EngA [Oceanicaulis sp. HTCC2633]
gi|83851436|gb|EAP89292.1| GTP-binding protein EngA [Oceanicaulis sp. HTCC2633]
Length = 459
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 260/469 (55%), Gaps = 42/469 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + I+GRPNVGKS LFNRL + A+V + P VTRD RE ++GDL +++D+AG
Sbjct: 5 LPALAIVGRPNVGKSTLFNRLAGKPLAIVDDRP--GVTRDRREARGRIGDLELRLVDTAG 62
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIKPI 238
E + I R T L + +F+ID R G+ +D + LRK H P I
Sbjct: 63 YEDD--KAGIEARMRAQTEAALDEADVCVFLIDGREGITAMDERFAEVLRKSHKPVI--- 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCE G++ E+ LG G+P+ +SA G GM +LY L ++E R+
Sbjct: 118 LAVNKCEGAKGEYGAM-----EAWKLGMGEPVPVSAAHGEGMGDLYARLTDAIEAAQDRI 172
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D DDE PL+LA+ GRPNVGKSTL+NAL+ EDR++ GPEAGL
Sbjct: 173 -------RAEMEADGYGEGDDEEDPPLRLAVAGRPNVGKSTLINALIGEDRLITGPEAGL 225
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V +E+ G+ V L DTAG +R K + +S + + + A +V L++DAE
Sbjct: 226 TRDAIAVEWEWDGQRVRLHDTAGLRKRGKVDDRLERMSAADTLRAIKFAEIVLLLVDAER 285
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R V EGRGLVV++ K DL+ +Q R +E + ++PQ+ G
Sbjct: 286 PFEKQDLTIADRVVTEGRGLVVLITKWDLIEDKQAKLAELR------EEFERLLPQIKGA 339
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH---SWKDQSAQPK 524
P++ S++ GRG +M V ++ W +++ T LN WL +++ RH + + +P
Sbjct: 340 PLIPISSISGRGLEKIMPAVSALHKNWDVKVKTRDLNDWLAEMVQRHPPPAVDGRRVKP- 398
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y +Q KARPPTFV S L D+ R+L L+E FDL G+PIR+
Sbjct: 399 -RYLSQTKARPPTFVLMASRAAHLPDSYKRYLINGLREAFDLPGVPIRL 446
>gi|254466194|ref|ZP_05079605.1| GTP-binding protein EngA [Rhodobacterales bacterium Y4I]
gi|206687102|gb|EDZ47584.1| GTP-binding protein EngA [Rhodobacterales bacterium Y4I]
Length = 487
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 182/474 (38%), Positives = 271/474 (57%), Gaps = 35/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R+G+ P D LR+ + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVDMADICLFMIDARTGVTPTDEIFADILRRKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+P+ +S E G GM +LY L+P E + ++
Sbjct: 119 NKAE----GNAAEAGVL-EAYGLGLGEPLRLSGEHGEGMPDLYGILQPLAEKFEAEAVDH 173
Query: 302 SCTQN------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
S + ++ P ++K PLQ+A+VGRPN GKSTL+N +L E+R+L GPE
Sbjct: 174 SPDTDVEVYEEIGEDEEEVVPVPTDAK-PLQVAVVGRPNAGKSTLINKILGEERLLTGPE 232
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRD++ + + G + + DTAG ++ K ++ LSV + + A VV ++LD
Sbjct: 233 AGITRDAISLKINWNGVPMRVFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLD 292
Query: 415 A------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++R A EGR +VV VNK D +Q+ + +KEA + ++PQ+
Sbjct: 293 ASIPFEQQDLRIADLAEREGRAVVVAVNKWDAEEHKQDK--LRDLKEAFGR----LLPQL 346
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQP 523
G P+V SA G+G + ++ Y W R+PT+ LNRWL ++ +H Q +
Sbjct: 347 RGAPLVTVSAKTGKGLDRLQDAIMRAYATWNRRVPTAALNRWLVGMLEQHPPPAPQGKRI 406
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K+RPP FV S L ++ R+L L+EDFD+ G PIR+ R
Sbjct: 407 KLRYMTQAKSRPPGFVVMCSHPDKLPESYTRYLVNGLREDFDMPGTPIRLYMRG 460
>gi|86138474|ref|ZP_01057048.1| GTP-binding protein EngA [Roseobacter sp. MED193]
gi|85824999|gb|EAQ45200.1| GTP-binding protein EngA [Roseobacter sp. MED193]
Length = 489
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 265/478 (55%), Gaps = 43/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R +T + +FMID R+G+ P+D + LR+ + + I+A
Sbjct: 62 -DVTDNSLEGRMRRLTERAVDMADICLFMIDARTGVTPVDEMFAEILRRKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+P+ +S E G GM +L+ L P + + ++
Sbjct: 119 NKAEGNAADAGVL-----EAYGLGLGEPLRLSGEHGEGMADLFSELAPLADQFAEEAVDH 173
Query: 302 S----------CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
S + S V P ++ PLQ+A+VGRPN GKSTL+N +L EDR+L
Sbjct: 174 SPVVDLDLDEDDDWDEDSAPPVPVPTREK---PLQVAVVGRPNAGKSTLINKILGEDRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVV 409
GPEAG+TRD++ + ++ G + + DTAG ++ K EK LSV + + A VV
Sbjct: 231 TGPEAGITRDAISLQIDWSGTPMRIFDTAGMRKKAKVLEK-LEKLSVSDGLRAVKFAEVV 289
Query: 410 ALVLDAE------EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
++LDAE ++R A EGR +VV VNK D+ +Q A+ +
Sbjct: 290 VILLDAEIPFEQQDLRIADLAEREGRAVVVAVNKWDVEDNKQEKL------AALKEAFGR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKD 518
++PQ+ G P+V SA G+G + V+ Y W R+PT+ LNRWL ++ +H
Sbjct: 344 LLPQLRGAPLVTVSAKTGKGLDRLHAAVMRAYDVWNRRIPTAALNRWLTGMLEQHPPPAP 403
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + K++Y TQ K RPP FV S + + R+L L++DFD+ G PIR+T R
Sbjct: 404 QGKRIKLRYMTQAKTRPPGFVVMCSHPDKIPASYTRYLVNGLRQDFDMPGTPIRLTMR 461
>gi|347757132|ref|YP_004864694.1| small GTP-binding domain-containing protein [Micavibrio
aeruginosavorus ARL-13]
gi|347589650|gb|AEP08692.1| small GTP-binding domain protein [Micavibrio aeruginosavorus
ARL-13]
Length = 475
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/483 (37%), Positives = 272/483 (56%), Gaps = 44/483 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T++IIGRPNVGKS LFNRL R++ A++ +TP VTRD RE L D + +++D+AGLE
Sbjct: 3 TLVIIGRPNVGKSTLFNRLARKQMAIIDDTP--GVTRDWRETEGWLLDKKIRLIDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ + T L + +FM+D RSG+ P+D WLR+ I ++A+
Sbjct: 61 -EAFDDSMRGKMRRQTELALQEADAVLFMVDGRSGITPMDKHFANWLRRQ--DIPTVLAV 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP------------ 289
NKCE + A AE+ LG G+P+ +SA G G+ +LY L P
Sbjct: 118 NKCEH----ENAAAAGLAEAYALGLGEPLPMSAAHGYGLDDLYHMLSPYFEEEEEIEDAA 173
Query: 290 -SVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
S + D+ N+ P+ D +PL++A VGRPNVGKSTLLNALLQE+
Sbjct: 174 ASFGPSLTEEEIDALEGNDDFDLSAIEPQVDTDTIPLRVAFVGRPNVGKSTLLNALLQEE 233
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ PEAG TRD++ V + Y+ R LVDTAG ++ + + ++V S + + A
Sbjct: 234 RVMTSPEAGTTRDAIAVKWTYKDRLFRLVDTAGMRRKARIDDRLEKMAVQDSLRAIRLAE 293
Query: 408 VVALVLD------------AEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
V LVLD AE + ++EGR LV+ +NK D + + +A KR+++
Sbjct: 294 VCVLVLDGNNPMEKQDLGIAEHI--IDEGRALVLAINKWDAVEDK--AAAMKRIED---- 345
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
I+ + Q+ IPV+ SAL+G+ ++ ++ T+ W R+PTSR+NRWLR + ++
Sbjct: 346 RIEASLGQLREIPVITISALKGKNLEPMLDLILQTHAVWNRRVPTSRMNRWLRGMEEQNP 405
Query: 516 WKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+ +P +++Y TQ+KARPPTF ++S D R+L L+ DFD+ G+P+R+
Sbjct: 406 APMANGRPNRLRYITQIKARPPTFALWVSRPGDFPDTYKRYLINGLRRDFDIPGVPVRVM 465
Query: 575 QRS 577
R+
Sbjct: 466 IRT 468
>gi|414173122|ref|ZP_11427885.1| GTPase Der [Afipia broomeae ATCC 49717]
gi|410891774|gb|EKS39570.1| GTPase Der [Afipia broomeae ATCC 49717]
Length = 465
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 269/468 (57%), Gaps = 33/468 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 AIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGDGRLGDLEFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ID R+GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTEAAIAAADALMFVIDARAGLTPTDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G G+++LY+ALR + + + R
Sbjct: 118 ANKSEGKHGEAGAM-----ESYALGLGDPIPISAEHGEGLSDLYDALRVLMPEPVERD-- 170
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ S ++V +++ S P+++A++GRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 171 -DEEDDPESFENVDGEDENLSTRPIRVAVLGRPNAGKSTLINRLLGEERLLTSPEAGTTR 229
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E LSV + + + A VV L++DA
Sbjct: 230 DSIAVDVMWKGREFRVFDTAGLRRRSRIEDKLEKLSVSDALRAVRFAEVVVLMMDAQNKF 289
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ + + R++E + ++PQV G+PV
Sbjct: 290 EEQDLRLADLIEREGRAIVIAVNKWDLME--RAPSQIARLRE----DADHLLPQVKGMPV 343
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S + G G +M + D Y W R+ T+ LNRW + + + S + K+ Y
Sbjct: 344 VAVSGMMGEGIDRLMSAIEDAYGVWNRRISTASLNRWFEQAVQNNPPPAVSGRRLKLNYI 403
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L S++ FDL G PIRIT R
Sbjct: 404 TQAKARPPSFVVFCSRADAIPESYLRYLVNSMRGAFDLPGTPIRITLR 451
>gi|325187572|emb|CCA22109.1| ras family GTPase putative [Albugo laibachii Nc14]
gi|325188870|emb|CCA23399.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 535
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 253/469 (53%), Gaps = 33/469 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GR NVGKS LFNRL + R A+V+N P TRD R ++ L F+V+D+ GLE
Sbjct: 53 LALVGRTNVGKSTLFNRLTKSRRAIVHNVPG--TTRDRRFAPGRIAGLEFEVIDTGGLE- 109
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+A SGS+ + T + + F+ID R G+ P+D +WLRK N
Sbjct: 110 DAPSGSLEEGMLSQTKIAVHEADLIFFLIDGRQGVTPVDSYFARWLRKENASAPIHAVAN 169
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E + + E LG G+ I ISAE G G++ L +AL PS + + R N
Sbjct: 170 KLEGYPD---RWQDSLNECYQLGMGEAIPISAEHGEGVSLLLDALIPSYDLFEKR--NPV 224
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
QNN + DE ++ AIVGRPNVGKSTLLN +++EDRVL GPE G+TRDS
Sbjct: 225 IQQNNEDDNKI-----DEDSHKIKFAIVGRPNVGKSTLLNRIIREDRVLTGPEPGVTRDS 279
Query: 363 VRVHFEYQGRTVYLVDTAG---WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
+ V + + + L+DTAG +R+ LSV S + +A VVA+V D E
Sbjct: 280 IEVPWTFGEHEIKLIDTAGIRRHSKRDHSNQIEDLSVRDSFDAIDKAQVVAIVTDLSEKK 339
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R +E+GR L++I NK D++ Y+ V Q+++ + QV G+
Sbjct: 340 LTHMDLTIAQRVIEQGRSLLIIANKCDMV-----KTSYEYEMSRVKQQLEDSLAQVRGVS 394
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKY 527
V+ TSAL G G ++ ++I+ Y+KW R+ T+RLNRW + H + + +P IKY
Sbjct: 395 VLPTSALTGHGTRKILPEIINVYEKWIKRISTARLNRWFNAISRHHPPPNTKGKRPNIKY 454
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV RPPTFV F++ + ++ RF L+E+F + GIP R+ R
Sbjct: 455 VTQVSTRPPTFVLFVNSPSLIPESYQRFFLSQLREEFGMDGIPARLLLR 503
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 313 VTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGR 372
V +PE ++ +LA+VGR NVGKSTL N L + R +V G TRD G
Sbjct: 41 VLAPEARSNQF--RLALVGRTNVGKSTLFNRLTKSRRAIVHNVPGTTRDRRFAPGRIAGL 98
Query: 373 TVYLVDTAG 381
++DT G
Sbjct: 99 EFEVIDTGG 107
>gi|302383643|ref|YP_003819466.1| ribosome-associated GTPase EngA [Brevundimonas subvibrioides ATCC
15264]
gi|302194271|gb|ADL01843.1| ribosome-associated GTPase EngA [Brevundimonas subvibrioides ATCC
15264]
Length = 537
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 266/499 (53%), Gaps = 56/499 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD R +GD+ ++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLVGKRLALVDDRPG--VTRDRRYAEGSIGDMDLTLIDTAGYE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+ + S+ R T L +FM+D R G+ LD + LRK Q KP++ +
Sbjct: 62 DVSDDSLESRMREQTELALEDGDLILFMMDAREGVTSLDRIFAERLRK---QHKPVILLA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK ES +G G E+ LGFG+P+AISAE G GM +LY A+R
Sbjct: 119 NKAESRESG-----GGVGEAHALGFGEPVAISAEHGEGMADLYAAIR------------- 160
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++ D+ E DE P+++AI+GRPN GKSTL+N L+ EDR+L GPEAG+TRD
Sbjct: 161 ------DASVDIFIEEIDEPDKPIRIAIIGRPNAGKSTLINHLIGEDRLLTGPEAGITRD 214
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVRA 420
S+ V +EY+G+ + LVDTAG ++ + ++ LSV + + + A VV LV+D +
Sbjct: 215 SISVDWEYEGQNIRLVDTAGMRRKARVQEKLEKLSVADTIRAITYAEVVVLVMDKDNAFD 274
Query: 421 VE----------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V+ EGR LV + K DL Q + L + A +PQ+ G P V
Sbjct: 275 VQDLQLADLVEREGRALVYVAAKWDLEENPQ-AKLADLTRMA-----DDKLPQLRGSPFV 328
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKYFT 529
SA GRG +M V+ + W +++ T LN WL RH + K KY
Sbjct: 329 ALSAHSGRGVDRLMPAVLKAHATWSVKVKTKDLNDWLSMATQRHPPPAVDGKRIKTKYMA 388
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQ 589
Q KARPPTFV F S +L + +R+LT SL+E FDL G P+R+T K GS +
Sbjct: 389 QTKARPPTFVLFASRAASLPEHYIRYLTNSLRESFDLPGTPLRLTI-----KGGSENPYA 443
Query: 590 NTGQKVG--RTFSDKRTVP 606
+ G K G R D +T P
Sbjct: 444 SGGAKSGPERYKGDAKTAP 462
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L+LAIVGRPNVGKSTL N L+ + LV G+TRD + L+DTAG+
Sbjct: 1 MALKLAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYAEGSIGDMDLTLIDTAGY 60
>gi|83943023|ref|ZP_00955483.1| GTP-binding protein EngA [Sulfitobacter sp. EE-36]
gi|83846031|gb|EAP83908.1| GTP-binding protein EngA [Sulfitobacter sp. EE-36]
Length = 491
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 189/492 (38%), Positives = 276/492 (56%), Gaps = 41/492 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGAARLADLRFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +FMID R G+ P DL LRK + + I+A
Sbjct: 62 -EVTDDSLQGRMRRLTERAVDMADICLFMIDARVGVTPSDLVFADILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+PI +SAE G G+ +LY L P + + R D
Sbjct: 119 NKAE----GKAADAGVI-EAYSLGLGEPIRLSAEHGEGLNDLYSHLMPIADGFAERAQTD 173
Query: 302 S------CTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ T+ + D +P +K PLQ+A+VGRPN GKSTL+N ++ EDR+L GP
Sbjct: 174 APETDVDLTEEEAELGDEEAPVPVPTKTKPLQVAVVGRPNAGKSTLINQIMGEDRLLTGP 233
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++ + + DTAG +R K ++ LSV + + A VV ++L
Sbjct: 234 EAGITRDAISLQTDWFDVPMRIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 293
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +VV VNK DL + +Q K ++E+ + ++PQ
Sbjct: 294 DADIPFEQQDLRIADLAEREGRAVVVAVNKWDLETDKQGK--LKDLRES----FERLLPQ 347
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + + ++ Y+ W R+ T++LNRWL +M H Q +
Sbjct: 348 LKGAPLVTVSAKTGRGMDRLHNAIMRAYEVWNRRVTTAQLNRWLSGMMEAHPPPAPQGKR 407
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 408 IKLRYMTQAKTRPPGFVVMCSHPDKVPESYNRYLVNGLRLDFDMPGTPIRLWMR------ 461
Query: 583 GSSSSRQNTGQK 594
G S + G+K
Sbjct: 462 GQSDANPYKGRK 473
>gi|75676210|ref|YP_318631.1| GTP-binding protein EngA [Nitrobacter winogradskyi Nb-255]
gi|123613178|sp|Q3SR12.1|DER_NITWN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|74421080|gb|ABA05279.1| Small GTP-binding protein [Nitrobacter winogradskyi Nb-255]
Length = 455
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/468 (39%), Positives = 258/468 (55%), Gaps = 43/468 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F V+D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDEP--GVTRDRREGQARLGDLDFTVIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPRGSLTARMQEQTEAAIAAADALMFVFDARAGLTPTDRSFADFARRAD---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G+L ES LG GDP+ +SAE GM++LY+ALR
Sbjct: 118 ANKSEGRHGDAGAL-----ESYALGLGDPVGVSAEHDEGMSDLYDALR------------ 160
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
S + D + + P+++AIVGRPN GKST++N LL E+R+L PEAG TR
Sbjct: 161 -SVMPEPAEEVDEEEIVEPDMSRPIRVAIVGRPNAGKSTVINYLLSEERLLTSPEAGTTR 219
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E LSV + + + A V L++DA
Sbjct: 220 DSISVELNWKGRDFRIFDTAGLRRRSRIEAKLEKLSVADTLRAVRFAEAVVLMMDAQNRF 279
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ G SA ++ ++ +PQ+ G PV
Sbjct: 280 EEQDLRIADLIEREGRALVIAVNKWDLMKG--GSARIASLR----NDVDHWLPQIRGAPV 333
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + Y W R+ T+ LNRW ++ + S + K+ Y
Sbjct: 334 VAISGLTGEGIDRLMIAIQTAYAVWNRRVATALLNRWFQQAVAASPPPAVSGRRLKLNYA 393
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+E FDL G PIRIT R
Sbjct: 394 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRETFDLAGTPIRITLR 441
>gi|393725413|ref|ZP_10345340.1| GTP-binding protein Der [Sphingomonas sp. PAMC 26605]
Length = 466
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 263/482 (54%), Gaps = 52/482 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+++D+AG
Sbjct: 5 PVVAIIGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDATLVGLNFRIIDTAGY 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E + S+ R T +A+ A+FM D R GL PLD E+ +WLR + I+
Sbjct: 63 EDE-DAASLPGRMRQQTEAAVAQADVALFMFDSRVGLVPLDEEIARWLRGSTTPV--ILV 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G L ESL LGFGDP+ +SAE G G+ EL++AL P +E
Sbjct: 120 ANKAEGKAGADGIL-----ESLSLGFGDPVELSAEHGEGLVELFDALLPYIE-------- 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ N++ +D+ EDD+ + PL+LAI+GRPN GKSTL+N +L E R++ GPEA
Sbjct: 167 ---PEKNAAGEDIPHGEDDDEEYAPDAPLKLAIIGRPNAGKSTLINQILGEQRLITGPEA 223
Query: 357 GLTRDSVRVHFEYQ---------GRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
G+TRDS+ V + + R V L+DTAG +R + LSV + + A
Sbjct: 224 GITRDSIAVDWIWHDPEREHGEDARKVRLIDTAGMRKRANVQDKLEKLSVADALHAIDFA 283
Query: 407 HVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV L+LDA +++R A++EGR L+V +NK D+ S+L+ ++ A+ +
Sbjct: 284 EVVVLLLDATRGLESQDLRIADAALQEGRALIVAINKWDI--AENGSSLFNGIRGALEEG 341
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHS 515
+ Q+ G+PV+ S G+G ++ +T W R+ T LNRW K V
Sbjct: 342 LS----QIKGMPVLTVSGATGKGIDTLLKVAFETRDTWSHRVGTGELNRWFEKAVEANPP 397
Query: 516 WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ K++Y TQ K RPP FV F + L + R+L ++ D G +P+R+T
Sbjct: 398 PAPGGKRIKLRYMTQAKTRPPGFVLFGTRVDQLPMSYQRYLINGIRRDLGFGAVPVRLTL 457
Query: 576 RS 577
R+
Sbjct: 458 RA 459
>gi|383643087|ref|ZP_09955493.1| GTP-binding protein Der [Sphingomonas elodea ATCC 31461]
Length = 455
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 267/476 (56%), Gaps = 51/476 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A L L F+V+D+AG
Sbjct: 3 LPTVAIIGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDRREGDANLLGLEFRVIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + ++ R T + + ++F+ID R+G+ PLD E+ +WLR +P+V
Sbjct: 61 YEDE-DAATLPGRMRAQTEAAVREADVSLFLIDARAGVTPLDEEIARWLRSTD---RPVV 116
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
M NK E +G L E++ LG GDPI SAE G G+ +L+EAL P V+
Sbjct: 117 LMANKAEGRAGESGVL-----EAMALGLGDPIPFSAEHGEGVADLFEALLPHVDREDEEP 171
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D + PL+LAIVGRPN GKSTL+N +L EDR++ GPEAG+
Sbjct: 172 EEDPES----------------PDAPLKLAIVGRPNAGKSTLVNRILGEDRMITGPEAGI 215
Query: 359 TRDSVRVHFEY-----QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ + +E+ + R V LVDTAG ++ + E+ LSV + +++ A VV L+
Sbjct: 216 TRDSISIDYEWIDFEDKPRKVRLVDTAGLRKKARVEEKLEKLSVADTLRSIDFAEVVVLL 275
Query: 413 LDAE---EV-------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA EV R ++EGR L++ +NK D+ S+L+ VK A+ + +
Sbjct: 276 LDATRGLEVQDLKIADRVLQEGRALIIALNKWDV--AENASSLFNGVKGALDEGLA---- 329
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSA 521
QV G+P++ SA+ G+G +M +T + W R+ T +LNRW R +
Sbjct: 330 QVKGVPLLTVSAVTGKGIDTLMRVAFETREAWSRRVSTGQLNRWFERAIEANPPPAPGGK 389
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K +Y TQ K RPP+FV F + L + R+L L+ +FD G +P+R+ R+
Sbjct: 390 RIKPRYVTQNKTRPPSFVLFGTRVDLLPTSYQRYLVNGLRREFDFGAVPVRLVLRA 445
>gi|405382113|ref|ZP_11035935.1| ribosome-associated GTPase EngA [Rhizobium sp. CF142]
gi|397321601|gb|EJJ26017.1| ribosome-associated GTPase EngA [Rhizobium sp. CF142]
Length = 474
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 275/479 (57%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEARLIDLRFTIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R T + + ++F++D ++GL P+D +G+ LR+ KP+V +
Sbjct: 62 -EMTDESLQGRMRQQTETAIDEADLSLFVVDAKTGLTPVDTALGEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ + +G ++ LG G+P+ ISAE G GM +L +A+ PS
Sbjct: 118 ANKSEARGSDSGFY-----DAYSLGLGEPVPISAEHGQGMLDLRDAIVAALGEDVAYPSK 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED + + D ++ P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAVTDV-DLPQPTGEEGEEDEEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVV 409
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K EK LSV + + A V
Sbjct: 231 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVIEK-LEKLSVADGLRAIRFAETV 289
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA +++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 290 VIVFDATIPFEKQDLHIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V S G G +M +IDT + W R+ T++LNRWL + +H
Sbjct: 344 LLPQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTAKLNRWLEQQQVQHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 404 SGRRIKLKYMTQVKARPPAFMVSCTRSDALPESYTRYLINGLRADFDMPSVPIRIHYRS 462
>gi|406922929|gb|EKD60242.1| hypothetical protein ACD_54C00861G0001 [uncultured bacterium]
Length = 489
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/473 (38%), Positives = 266/473 (56%), Gaps = 34/473 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD+REG AKL DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDQP--GVTRDLREGDAKLFDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + ++F+ID R G+ P D LRK ++ I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVDMADVSLFLIDGRIGVTPSDETFADILRKKGARV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR-VLN 300
NK E G+L G + LG G+PI +SAE G GM +LY L+P ++ R N
Sbjct: 119 NKAEGKAGDAGALEGWS-----LGLGEPIRLSAEHGEGMDDLYTLLKPLEGEFAEREAEN 173
Query: 301 DSCTQNNSSTQDVTSPEDDES-----KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
T+ + S ++ +D ++ K PLQ+A++GRPN GKSTL+N +L DR+L GPE
Sbjct: 174 TPLTEVDVSEEEAELEQDADAFRPTEKKPLQIAVIGRPNAGKSTLINKILGYDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRD++ V + G + + DTAG ++ + + LSV + + A V+ ++LD
Sbjct: 234 AGITRDAISVRANWMGTPIKIFDTAGMRKKARINEKLEKLSVSDGIRAVRFAEVIVVLLD 293
Query: 415 AE---EVR-------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+ EV+ A EGR +V+ VNK DL +Q +KE ++PQ+
Sbjct: 294 VDIPFEVQDLRIADFAETEGRAVVIAVNKWDLEDEKQEK--LAELKEM----FDRLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQP 523
G P++ S GRG + ++ ++ W R+PT+RLN WL + H Q +
Sbjct: 348 RGAPLITVSGKTGRGLDRLHDAILKVHETWNKRIPTARLNTWLGAMTEAHPPPAPQGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVK RPP F+ S ++D+ R+L L+E FD+ G+PIR+T R
Sbjct: 408 KLRYMTQVKQRPPGFIVMCSHPDDMADSYRRYLVNGLREHFDMPGVPIRLTFR 460
>gi|346993952|ref|ZP_08862024.1| GTP-binding protein Der [Ruegeria sp. TW15]
Length = 487
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 266/482 (55%), Gaps = 52/482 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEGRLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R GL P D LRK + + I+A
Sbjct: 62 -DATDDSLQGRMRRLTERAVDMADVCLFMIDARVGLTPTDEMFADILRKKSKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L E+ LG G+P+ +S E G GMT+LY L P L D
Sbjct: 119 NKAEGNAADAGVL-----EAYNLGLGEPVRLSGEHGEGMTDLYAQLMP---------LAD 164
Query: 302 SCT---QNNSSTQDVTSPEDDESKLPL-------QLAIVGRPNVGKSTLLNALLQEDRVL 351
+ Q++S D+ ED E + PL Q+A+VGRPN GKSTL+N ++ EDR+L
Sbjct: 165 AAAEKAQDDSPQIDIELDEDGEGEAPLITADKPLQVAVVGRPNAGKSTLINKIIGEDRLL 224
Query: 352 VGPEAGLTRDSVRVHFEY-----QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
GPEAG+TRD++ + ++ + + DTAG ++ K ++ LSV + +
Sbjct: 225 TGPEAGITRDAISLRIDWADPDGDSTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKF 284
Query: 406 AHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A VV ++LDA +++R A EGR +VV VNK D+ +Q + +KE+
Sbjct: 285 AEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEDNKQEK--LRDLKES--- 339
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH- 514
++PQ+ G P++ SA GRG + ++ + W R+PT+ LNRWL ++ +H
Sbjct: 340 -FDRLLPQLRGAPLITVSAKTGRGLERLRAAILRAHDVWNRRVPTAALNRWLTAMLEQHP 398
Query: 515 SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
Q + K++Y TQ K RPP FV S + + R+L L+EDFD+ G PIR+T
Sbjct: 399 PPAPQGRRIKLRYMTQAKTRPPGFVVMCSHPDKMPASYNRYLVNGLREDFDMPGTPIRLT 458
Query: 575 QR 576
R
Sbjct: 459 LR 460
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ L LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEGRLGDLRFTVIDTAG 59
>gi|90418692|ref|ZP_01226603.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
gi|90336772|gb|EAS50477.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
Length = 469
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 269/473 (56%), Gaps = 38/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ +R ALV + P VTRD R G A L DL F+V+D+AGLE
Sbjct: 3 TIAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRRTGDATLLDLDFEVVDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T +A +FMIDV++G+ P D + +R+ A ++ I+
Sbjct: 61 -EAGADTLEGRMRTQTETAIASADLCLFMIDVKAGVMPQDRAFVEIMRRTAGKV--ILVA 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ G L ++ LG G+PI ISAE G+GM EL +A+ +E D
Sbjct: 118 NKSEARGAEAGML-----DAFELGLGEPIGISAEHGVGMGELRDAI---LEALGEETFAD 169
Query: 302 SCTQNNSSTQDVTSPEDDE------SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + DV EDDE + PL++AIVGRPN GKSTL+N L EDR+L GPE
Sbjct: 170 DTPEPEEALVDVPV-EDDEVEPVYDATKPLRIAIVGRPNAGKSTLINRFLGEDRMLTGPE 228
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRDS+ +E++GRT+ + DTAG ++ K ++ LSV + + A VV +V D
Sbjct: 229 AGITRDSIASEWEWRGRTIKVFDTAGMRRKAKVQEKLEKLSVADGLRAIKFAEVVVVVFD 288
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++ V+ EGR V+ NK DL+ RQ V + ++ ++PQ
Sbjct: 289 ATIPFERQDMSIVDLVMREGRAPVIAFNKWDLIEDRQE------VLADLREKTDRLLPQA 342
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
GI + S G G +M ++DT++ W R+ T++LN+WL +++ RHS + +
Sbjct: 343 RGIRAITVSGETGEGVERLMKAIVDTHEVWNKRISTAKLNQWLDRMVTRHSPPAVAGRRI 402
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
IKY TQVK+RPPTF+ S L+ + R+L L+E F L +PIR+ R
Sbjct: 403 NIKYMTQVKSRPPTFMISTSRPDALNASYTRYLINGLRESFGLFAVPIRLGLR 455
>gi|241205814|ref|YP_002976910.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859704|gb|ACS57371.1| small GTP-binding protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 474
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 276/479 (57%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ P+
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEDRAYPTK 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED + ++ T+ S D P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAVTDVDIPQTEGEDSDAD-EEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVV 409
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V
Sbjct: 231 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETV 289
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 290 VIVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H
Sbjct: 344 LLPQARGIRAVPISGQTGWGLDKLMQAIIDTDKVWNKRISTARLNRWLETQQIQHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 404 SGRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 462
>gi|260433297|ref|ZP_05787268.1| ribosome-associated GTPase EngA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417125|gb|EEX10384.1| ribosome-associated GTPase EngA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 484
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 268/471 (56%), Gaps = 31/471 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEGRLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +FMID R+G+ P D + LRK + + I+A
Sbjct: 62 -DATDDSLQGRMRRLTERAVDMADVCLFMIDARTGVTPTDELFAEILRKRSKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP---SVEDYMLRV 298
NK E G L E+ LG G+PI +S E G GMT+LY AL P ++E+
Sbjct: 119 NKAEGAAADAGVL-----EAYGLGLGEPIRLSGEHGEGMTDLYAALMPLADAMEEKQAEE 173
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
++ + + + P + PLQ+A+VGRPN GKSTL+N +L EDR+L GPEAG+
Sbjct: 174 TPETDVDLDEAGETEGEPPAITADKPLQVAVVGRPNAGKSTLINKILGEDRLLTGPEAGI 233
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ + ++ G + + DTAG ++ K + LSV + + A VV ++LDA
Sbjct: 234 TRDAISLRIDWNGTPMRIFDTAGMRKKAKVQDKLEKLSVSDGLRAVKFAEVVVVLLDAAI 293
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R A EGR +VV VNK D+ +Q + +KE+ + ++PQ+ G
Sbjct: 294 PFEQQDLRIADLAEREGRAVVVAVNKWDVEEHKQEK--LRDLKES----FERLLPQLRGA 347
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
P+V SA GRG + ++ + W R+PT+ LNRWL ++ +H Q + K++
Sbjct: 348 PLVTVSAKTGRGLDRLHEAILRAHDVWNRRIPTAALNRWLTAMVEQHPPPAPQGRRIKLR 407
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQ K RPP FV S + + R+L L++DFD+ G PIR+T R
Sbjct: 408 YMTQAKTRPPGFVVMCSHPDKMPASYTRYLVNGLRDDFDMPGTPIRLTLRG 458
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ L LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEGRLGDLRFTVIDTAG 59
>gi|56697187|ref|YP_167551.1| GTP-binding protein EngA [Ruegeria pomeroyi DSS-3]
gi|81676219|sp|Q5LR04.1|DER_SILPO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56678924|gb|AAV95590.1| GTP-binding protein EngA [Ruegeria pomeroyi DSS-3]
Length = 487
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/474 (38%), Positives = 271/474 (57%), Gaps = 36/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGQARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
T AT S+ R +T + +FMID R+G+ P D LR+ + + I+A
Sbjct: 62 T-ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ ELY L P + D M + +
Sbjct: 119 NKAEGAAADAGVI-----EAYGLGLGEPIRLSAEHGEGLNELYAVLMP-LADEMEQQAEE 172
Query: 302 SCTQ-------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + ++V +P + PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 173 QAPETDVDLDPEDEDGEEVAAPHAITREKPLQVAVVGRPNAGKSTLINRILGEDRLLTGP 232
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++ + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 233 EAGITRDAISLQIDWNDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 292
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +V+ VNK D+ +Q+ + +KE+ + ++PQ
Sbjct: 293 DAAIPFEQQDLRIADLAEREGRAVVIAVNKWDVEENKQDK--LRELKES----FERLLPQ 346
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + ++ ++ W R+PT+ LNRWL ++ +H Q +
Sbjct: 347 LRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIPTAALNRWLIGMLEQHPPPAPQGKR 406
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+T R
Sbjct: 407 IKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYLVNGLRADFDMPGTPIRLTLR 460
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ L LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAG 59
>gi|399036746|ref|ZP_10733710.1| ribosome-associated GTPase EngA [Rhizobium sp. CF122]
gi|398065573|gb|EJL57194.1| ribosome-associated GTPase EngA [Rhizobium sp. CF122]
Length = 474
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 274/478 (57%), Gaps = 41/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLIDLRFTIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ + I+
Sbjct: 62 -EAHEESLQGRMRAQTEAAIDEADLSLFVVDAKTGLTPVDTALAEMLRRRGKPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSVE 292
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ P E
Sbjct: 119 NKSEA----RGSDAGFY-DAYSLGLGEPTPISAEHGQGMLDLRDAIVAALGEERAFPPKE 173
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + + D + ++ P D+SK PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 174 DVAVTDV-DIPQSTGADGEEEEEPAYDDSK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K EK LSV + + + A +V
Sbjct: 232 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVIEK-LEKLSVADTLRAIRFAELVV 290
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA +++ V+ EGR V+ NK D++ Q A+ ++E + +
Sbjct: 291 IVFDATIPFEKQDLHIVDLVLREGRAAVLAFNKWDMIEDPQ--AVLADLRE----KTDRL 344
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S GRG +M +IDT + W R+ T+RLNRWL + +H S
Sbjct: 345 LPQARGIRAVPISGQTGRGLDKLMQSIIDTDKVWNKRISTARLNRWLEQQQVQHPPPAVS 404
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 GRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHYRS 462
>gi|340027789|ref|ZP_08663852.1| GTP-binding protein Der [Paracoccus sp. TRP]
Length = 489
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/492 (36%), Positives = 270/492 (54%), Gaps = 36/492 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGQGRLGDLRFIVVDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R +T + + +F+ID R G+ D LRK A + I+A
Sbjct: 62 M-AEDDSLQGRMRRLTERAVDEADVCLFIIDARVGVTAADEYFADILRKRAKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ E+ LG G+P+ ISAE G GM +LY AL P E + + +
Sbjct: 119 NKAEGRAGEAGAI-----EAYALGLGEPLRISAEHGEGMDDLYRALVPLAEGFEAQNVQ- 172
Query: 302 SCTQNNSSTQDVTSPEDD---ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + +D +D + PLQ+A++GRPN GKSTL+N +L EDR+L GPEAG+
Sbjct: 173 QAPETDVAVEDGDEEAEDWRPSERKPLQIAVIGRPNAGKSTLINRILGEDRLLTGPEAGI 232
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ V + G V + DTAG ++ + LSV + + A VV ++LD
Sbjct: 233 TRDSISVGTTFMGTPVRIFDTAGMRKKARVTDKVEKLSVADGLRAVRFAEVVVVLLDVGI 292
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R A EGR +VV NK DL + K ++EA + ++PQ+ G
Sbjct: 293 PFEQQDLRIADFAESEGRAVVVAANKWDLEEDKPEK--LKELREA----FERLLPQLKGA 346
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V SA G+G + ++ ++ W R+ T+RLN+WL + H + +++
Sbjct: 347 PLVTVSARTGKGLDRLHAAILRAHEVWNRRVSTARLNQWLSAMTEAHPTPAPGGRRIRLR 406
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQVK RPP FV + L D+ R+L L++DFD+ G PIR+T R GS +
Sbjct: 407 YITQVKTRPPAFVIMATHTDKLPDSYARYLVNGLRQDFDMPGTPIRLTFRD----QGSKN 462
Query: 587 SRQNTGQKVGRT 598
++ K+ ++
Sbjct: 463 PYKDKANKINQS 474
>gi|83954198|ref|ZP_00962918.1| GTP-binding protein EngA [Sulfitobacter sp. NAS-14.1]
gi|83841235|gb|EAP80405.1| GTP-binding protein EngA [Sulfitobacter sp. NAS-14.1]
Length = 491
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 276/492 (56%), Gaps = 41/492 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGAARLADLRFTVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +FMID R G+ P DL LRK + + I+A
Sbjct: 62 -EVTDDSLQGRMRRLTERAVDMADICLFMIDARVGVTPSDLVFADILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+PI +SAE G G+ +LY L P + + R D
Sbjct: 119 NKAE----GKAADAGVI-EAYSLGLGEPIRLSAEHGEGLNDLYTHLMPIADGFAERAQTD 173
Query: 302 S------CTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ T+ + D +P +K PLQ+A+VGRPN GKSTL+N ++ EDR+L GP
Sbjct: 174 APETDVDLTEEEAELGDEEAPMPVPTKTKPLQVAVVGRPNAGKSTLINQIMGEDRLLTGP 233
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++ + + DTAG +R K ++ LSV + + A VV ++L
Sbjct: 234 EAGITRDAISLQTDWFDVPMRIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 293
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +VV VNK DL + +Q K ++E+ + ++PQ
Sbjct: 294 DADIPFEQQDLRIADLAEREGRAVVVAVNKWDLETDKQGK--LKDLRES----FERLLPQ 347
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + + ++ Y+ W R+ T++LNRWL ++ H Q +
Sbjct: 348 LKGAPLVTVSAKTGRGMDRLHNAIMRAYEVWNRRVTTAQLNRWLSGMIEAHPPPAPQGKR 407
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 408 IKLRYMTQAKTRPPGFVVMCSHPDKVPESYNRYLVNGLRLDFDMPGTPIRLWMR------ 461
Query: 583 GSSSSRQNTGQK 594
G S + G+K
Sbjct: 462 GQSDANPYKGRK 473
>gi|334320515|ref|YP_004557144.1| GTP-binding protein engA [Sinorhizobium meliloti AK83]
gi|384533022|ref|YP_005715686.1| GTP-binding protein engA [Sinorhizobium meliloti BL225C]
gi|384538727|ref|YP_005722811.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|407723173|ref|YP_006842834.1| GTPase Der [Sinorhizobium meliloti Rm41]
gi|333815198|gb|AEG07865.1| GTP-binding protein engA [Sinorhizobium meliloti BL225C]
gi|334098254|gb|AEG56264.1| GTP-binding protein engA [Sinorhizobium meliloti AK83]
gi|336037380|gb|AEH83310.1| putative GTP-binding protein [Sinorhizobium meliloti SM11]
gi|407323233|emb|CCM71834.1| GTPase Der [Sinorhizobium meliloti Rm41]
Length = 476
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 275/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E++ S+ R T + + ++F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -ESSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADQTLAEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED ++ + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAETNVDIRPAAGEGTEDEEVEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q AL ++E + + +
Sbjct: 292 IVFDATVPFEKQDLQIVDLVLREGRAAVLAFNKWDLVENWQ--ALLVDLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIR+ R+
Sbjct: 406 GRRLKLKYMTQVKARPPGFMISCTRPEAVPESYTRYLINGLRNDFDLPGVPIRVHFRA 463
>gi|395493307|ref|ZP_10424886.1| GTP-binding protein Der [Sphingomonas sp. PAMC 26617]
gi|404253639|ref|ZP_10957607.1| GTP-binding protein Der [Sphingomonas sp. PAMC 26621]
Length = 460
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 263/479 (54%), Gaps = 51/479 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+V+D+AG E
Sbjct: 2 VAIIGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGAATLVGLDFRVIDTAGYE- 58
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ + S+ R T +A+ A+F+ D R+G+ PLD E+ +WLR + I+ N
Sbjct: 59 DKDAASLPGRMRAQTEAAVAQADVALFLFDSRAGIVPLDEEIARWLRGSTTPV--ILVAN 116
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E G L ESL LGFGDP+ +SAE G G+ EL++AL P +E
Sbjct: 117 KAEGKAGADGIL-----ESLALGFGDPVELSAEHGEGLVELFDALLPFIE---------- 161
Query: 303 CTQNNSSTQDVTSPEDDES---KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ +++ D+ + + DE PL+LAI+GRPN GKSTL+N +L EDR++ GPEAG+T
Sbjct: 162 -PEKDAAGDDIPNADVDEEYAPDAPLKLAIIGRPNAGKSTLINRILGEDRLITGPEAGIT 220
Query: 360 RDSVRVHFEYQ---------GRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
RDS+ V + + R V L+DTAG +R + LSV + + A VV
Sbjct: 221 RDSIAVDWIWHDPDREPGEDARKVRLIDTAGMRKRANVQDKLEKLSVADALHAIDFAEVV 280
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
L+LDA +++R A++EGR L+V +NK D+ S+L+ ++ A ++
Sbjct: 281 VLLLDATRGLESQDLRIADAALQEGRALIVAINKWDV--AENASSLFNGIRTA----LED 334
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKD 518
+ Q+ G+PV+ SA G+G ++ DT W R+ T LNRW R V
Sbjct: 335 GLSQIKGMPVLTVSAATGKGLDTMLKVAFDTRDAWSRRVGTGELNRWFERAVEANPPPAP 394
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ K RPP FV F + L + R+L ++ D G +P+R+T R+
Sbjct: 395 GGKRIKLRYLTQAKTRPPGFVLFGTRVDQLPTSYQRYLINGIRRDLGFGAVPVRLTLRA 453
>gi|148556031|ref|YP_001263613.1| GTP-binding protein EngA [Sphingomonas wittichii RW1]
gi|148501221|gb|ABQ69475.1| small GTP-binding protein [Sphingomonas wittichii RW1]
Length = 454
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 268/475 (56%), Gaps = 47/475 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+V+D+AG
Sbjct: 4 LPTVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDATLIGLDFRVIDTAG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
ET+ ++ R T + + A+FM+D R+G+ PLD EV WLR + ++
Sbjct: 62 FETDDPQ-TLPGRMRAQTQAAVREADVALFMVDARAGVTPLDEEVALWLRGEDTPV--VL 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E G + AG E+ LG GDPI SAE G G+ +L+EALRP +E
Sbjct: 119 VANKAE----GKATEAGVH-EAYGLGLGDPIPFSAEHGEGLVDLFEALRPHIE------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
QD ED+++ PL+LAIVGRPN GKSTL+N +L E R++ GPEAG+T
Sbjct: 167 -------RDEDQDGEEGEDEDAAGPLKLAIVGRPNAGKSTLINKILGEQRMITGPEAGIT 219
Query: 360 RDSVRVHFEYQG-----RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
RDS+ + +++ R + L+DTAG +R K + LSV + + A VV L+L
Sbjct: 220 RDSIAIDWDWHAPDGTVRPIRLIDTAGMRKRAKVQDKLEKLSVADGLRAVDFAEVVVLLL 279
Query: 414 D------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D A+++R ++EGR L++ ++K D+ + AL++ V+ A+ + + Q
Sbjct: 280 DATLGLEAQDLRIADKVLQEGRALIIALSKWDVAA--DPPALFQGVRTALDEGLA----Q 333
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQ 522
V G+P++ S + GRG ++ +T + W R+ T++LNRW R + +
Sbjct: 334 VKGLPLLTVSGVSGRGVDQLLQAAHETREAWSQRVSTAKLNRWFERAIEANPPPAPGGKR 393
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ + RPP+FV F + L ++ R+L ++ D G +P+R+T R+
Sbjct: 394 IKLRYLTQARTRPPSFVLFGTRVDQLPESYRRYLVNGIRRDLGFGSVPVRLTLRA 448
>gi|16264869|ref|NP_437661.1| GTP-binding protein EngA [Sinorhizobium meliloti 1021]
gi|26006728|sp|Q92UK6.1|DER_RHIME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|15141008|emb|CAC49521.1| putative GTP-binding protein [Sinorhizobium meliloti 1021]
Length = 476
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 275/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E++ S+ R T + + ++F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -ESSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADQTLAEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED ++ + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAETNVDIRPVAGEGTEDEEVEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q AL ++E + + +
Sbjct: 292 IVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVENWQ--ALLVDLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIR+ R+
Sbjct: 406 GRRLKLKYMTQVKARPPGFMISCTRPEAVPESYTRYLINGLRNDFDLPGVPIRVHFRA 463
>gi|433610724|ref|YP_007194185.1| ribosome-associated GTPase EngA [Sinorhizobium meliloti GR4]
gi|429555666|gb|AGA10586.1| ribosome-associated GTPase EngA [Sinorhizobium meliloti GR4]
Length = 476
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 275/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E++ S+ R T + + ++F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -ESSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADQTLAEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED ++ + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAETNVDVRPVAGEGTEDEEVEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q AL ++E + + +
Sbjct: 292 IVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVENWQ--ALLVDLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIR+ R+
Sbjct: 406 GRRLKLKYMTQVKARPPGFMISCTRPEAVPESYTRYLINGLRNDFDLPGVPIRVHFRA 463
>gi|110633049|ref|YP_673257.1| GTP-binding protein EngA [Chelativorans sp. BNC1]
gi|123162694|sp|Q11KI3.1|DER_MESSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110284033|gb|ABG62092.1| small GTP-binding protein [Chelativorans sp. BNC1]
Length = 470
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 267/472 (56%), Gaps = 36/472 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ RR ALV +TP VTRD R A+L DLRF V+D+AGLE
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGRRIALVDDTP--GVTRDRRVHSARLLDLRFDVIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
EA + ++ R T + + +FMID R+GL P D + +R+ KP+V +
Sbjct: 62 EAAAPTLAGRMRAQTETAIDEADLVLFMIDARAGLMPDDRAFAEVVRRKG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK + G L E+ LG GDP+A+SAE G GM EL +A+
Sbjct: 119 NKTDVRGTDAGVL-----EAFALGLGDPVAVSAEHGQGMVELRDAI-AEFAGQAEEEERV 172
Query: 302 SCTQNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + +D+ P+ +E++ P+++A+VGRPNVGKSTL+NAL+ E+R+L GPEAG
Sbjct: 173 TEEETVLIGEDI-DPDSEEARYDPTKPIRIAVVGRPNVGKSTLINALIGEERLLTGPEAG 231
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ V + ++GR + L DTAG ++ + ++ LSV +S + + A VV +V DA
Sbjct: 232 ITRDSISVDWHWRGREIKLFDTAGMRRKARVQEKLEKLSVGESLRAIRFAEVVIIVFDAT 291
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
++++ V EGR V+ NK DL+ RQ R ++ ++PQ G
Sbjct: 292 MPFEKQDLQIADLIVREGRAPVIAFNKWDLIENRQEKLAELR------EKTDRLLPQARG 345
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+ V SA GRG ++ + T+ W R+PT LNRWL +H S + K+
Sbjct: 346 LRSVPISAETGRGLDQLLEAAVSTHVVWNRRVPTGPLNRWLEAASTQHPPPAVSGRRLKV 405
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KY TQVK RPP FV S + + + +R+L L+E FD+ G+PIRI+ R+
Sbjct: 406 KYMTQVKTRPPGFVLSCSRPEAMPQSYIRYLVNGLRESFDIFGVPIRISLRA 457
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 23/130 (17%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL----VD 378
+P ++AIVGRPNVGKSTL N L+ LV G+TRD RVH R + L +D
Sbjct: 1 MPFKVAIVGRPNVGKSTLFNRLVGRRIALVDDTPGVTRDR-RVH---SARLLDLRFDVID 56
Query: 379 TAGWLQREKEKGPASLSVM--QSRKNLMRAHVVALVLDAE-----EVRAVEE-----GRG 426
TAG E+ P M Q+ + A +V ++DA + RA E G+
Sbjct: 57 TAGL---EEAAAPTLAGRMRAQTETAIDEADLVLFMIDARAGLMPDDRAFAEVVRRKGKP 113
Query: 427 LVVIVNKMDL 436
+V++ NK D+
Sbjct: 114 VVLVANKTDV 123
>gi|378826832|ref|YP_005189564.1| GTP-binding protein engA [Sinorhizobium fredii HH103]
gi|365179884|emb|CCE96739.1| GTP-binding protein engA [Sinorhizobium fredii HH103]
Length = 476
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 272/477 (57%), Gaps = 38/477 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R T + + ++F+ID ++GL P D + + LR+ + IV
Sbjct: 62 QSAPD-SLQGRMWAQTEQAIDEADLSLFVIDAKAGLTPADETLAEMLRRRGKPV--IVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSVE 292
NK E+ + G ++ LG G+P ISAE G GM +L +A+ P E
Sbjct: 119 NKSEARGSD-----GGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPRE 173
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D ++ T + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 174 DVAETDVDIRPTGAGGGEDEESEPTYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V +E++GRT+ + DTAG ++ K ++ LSV + + + A V +
Sbjct: 233 GPEAGITRDSISVEWEWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVVI 292
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+ DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 293 IFDATIPFEKQDLQIVDLVMREGRAAVLAFNKWDLVEDWQ--AVLADLRE----KTERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 347 PQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVSG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ +R+L L+ DFD+ G+PIR+ R+
Sbjct: 407 RRLKLKYMTQVKARPPGFMISCTRPEAVPESYVRYLINGLRNDFDMPGVPIRVHFRA 463
>gi|332185040|ref|ZP_08386789.1| ribosome-associated GTPase EngA [Sphingomonas sp. S17]
gi|332014764|gb|EGI56820.1| ribosome-associated GTPase EngA [Sphingomonas sp. S17]
Length = 456
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 264/475 (55%), Gaps = 48/475 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+V+D+AG
Sbjct: 4 LPIVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDAHLLGLDFRVIDTAG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E ++ R T + + A+F++D R+G+ PLD E+ +WLR I ++
Sbjct: 62 YEDEDPD-TLPGRMRRQTEAAVGEADVALFLVDARAGIMPLDEEIARWLRSSDTPI--VL 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A NK E G L E+L LGFGDP+ +SAE G G+ +L+EAL P ++
Sbjct: 119 AANKAEGRAAEQGIL-----EALALGFGDPVQLSAEHGEGVGDLFEALLPFID------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D+ +P PL+LAIVGRPN GKSTL+N L +DR++ GPEAG+T
Sbjct: 167 ---REVEEEEEVDLENP-----FAPLKLAIVGRPNAGKSTLINRFLGQDRLITGPEAGIT 218
Query: 360 RDSVRVHFEYQG-----RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
RDS+ + +E++ R V L+DTAG ++ K + LSV + + + A VV L+L
Sbjct: 219 RDSIAIDWEWRDRDGEVRQVRLIDTAGMRKKAKVQDKLEKLSVADALRAVDFAEVVVLLL 278
Query: 414 DAE----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA R +EEGR L++ +NK D+ S+L+ VK+A ++ + Q
Sbjct: 279 DATLGLESQDLRIADRVLEEGRALLIALNKWDV--AENPSSLFNGVKKA----LEDGLSQ 332
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQ 522
V G+P++ SA G+G ++ +T W R+PT LNRW R V +
Sbjct: 333 VKGVPLLAVSAATGKGLDTLIEAAFETRAAWSKRVPTGELNRWFERAVDANPPPAPGGKR 392
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK+RPP+FV F + L + R+L S++ + G +P+R+T R+
Sbjct: 393 IKLRYVTQVKSRPPSFVIFGTRVDQLPASYERYLVNSMRRELGFGAVPVRLTLRA 447
>gi|222149419|ref|YP_002550376.1| GTP-binding protein EngA [Agrobacterium vitis S4]
gi|254783133|sp|B9JZQ5.1|DER_AGRVS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221736402|gb|ACM37365.1| GTP-binding protein [Agrobacterium vitis S4]
Length = 474
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 274/473 (57%), Gaps = 39/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFHIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + ++F++D + GL +D + LRK KP+V +
Sbjct: 62 -EAGADTLEGRMRAQTEIAIDEADLSLFVVDAKMGLTHVDKALADMLRKRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE-DYMLRVL 299
NK E+ GS G ++ LG G+P+ ISAE G GM +L +A+ ++ D
Sbjct: 118 ANKSEA----RGS-DGGFYDAFTLGLGEPVPISAEHGQGMIDLRDAIVEAIGVDRAFPED 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL------PLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+D + + + EDDE L PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DDDVAETDIVLRPTVEGEDDEEDLAYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLTG 232
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVAL 411
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V +
Sbjct: 233 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADTLRAIRFAETVVI 291
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 292 VFDATIPFEKQDIQIVDLVLREGRAAVLAFNKWDLVEDPQ--AVLAELRE----KTERLL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V + G G +M +IDT W R+ T++LNRWL V +H S
Sbjct: 346 PQARGIRAVPMAGQTGYGLEKLMQSIIDTDMVWNKRISTAKLNRWLDSVQTQHPPPAVSG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY TQVKARPP F+ + ++ ++ +R+LT L+ DF++ G+PIRI
Sbjct: 406 RRLKLKYMTQVKARPPAFMISCTRPDSVPESYIRYLTNGLRADFNMPGVPIRI 458
>gi|424885504|ref|ZP_18309115.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393177266|gb|EJC77307.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 472
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 271/475 (57%), Gaps = 37/475 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D + + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMIDLRDAIVAAIGEDRAYPAK 172
Query: 300 NDSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
D N + ED DE+K PL++AIVGRPN GKSTL+N L EDR+L GP
Sbjct: 173 EDVAVTNVDVSDSEGGDEDEEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTGP 231
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +V
Sbjct: 232 EAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVIVF 291
Query: 414 DA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++PQ
Sbjct: 292 DATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLPQ 345
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
GI V S G G +M +IDT + W R+ T+RLNRWL +H S +
Sbjct: 346 ARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSGRR 405
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 IKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 460
>gi|349686251|ref|ZP_08897393.1| GTP-binding protein Der [Gluconacetobacter oboediens 174Bp2]
Length = 473
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 261/479 (54%), Gaps = 31/479 (6%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
F ++ LP V+I GRPNVGKS +FNRL+ RR+ALV +TP VTRD +EG A +
Sbjct: 5 FPSAPVDALPVVVIAGRPNVGKSTIFNRLVGRRQALVADTP--GVTRDRKEGQATVRGRA 62
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+++D+AGLE EA ++ R + + +A +F ID RSGL P D WLR+
Sbjct: 63 IRIIDTAGLE-EAAPDTLYGRMRASSESAVADADLVLFCIDARSGLTPADEHFANWLRR- 120
Query: 232 APQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
Q +P++ + NK E A AA E+ LG G P+AISAE G G+ +L +
Sbjct: 121 --QGRPVLLIANKAEGRQG-----AAAAMEAFSLGLGAPLAISAEHGEGVADLMSEIADR 173
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ L + T+ + Q ED PL+LAIVGRPN GKSTLLN LL E+R+
Sbjct: 174 LPPTDLPPVQKP-TRRSRREQAEGEEEDVRPPGPLRLAIVGRPNAGKSTLLNRLLGEERM 232
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ GPE GLTRDS+ V + LVDTAG ++ + ++ +SV S + L A VV
Sbjct: 233 ITGPEPGLTRDSIAVMLHDDQGPIQLVDTAGLRRKARIDETLEKMSVSASIEALKMAEVV 292
Query: 410 ALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA + R +E EGR V+ +NK D + R + ++A+ I+T
Sbjct: 293 ILVLDATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRAAT------RQAIKDRIET 346
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ Q+ GIPVV SA+ G G ++ V Y W R+PT LNRW ++ RH
Sbjct: 347 SLAQMRGIPVVAFSAMTGAGINKLLPTVRRAYDIWNRRVPTGALNRWFEMMVERHPPPLV 406
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ KARPPTF+ F + L + R+L L+E FDL G PIR+ R+
Sbjct: 407 DGRRLKLRYITQAKARPPTFIVFGTRTDQLPEDYQRYLVNGLRETFDLPGTPIRLLLRA 465
>gi|339504435|ref|YP_004691855.1| GTP-binding protein EngA [Roseobacter litoralis Och 149]
gi|338758428|gb|AEI94892.1| GTP-binding protein EngA [Roseobacter litoralis Och 149]
Length = 492
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 272/494 (55%), Gaps = 43/494 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R +T + +FM+D R G+ P DL LRK A + I+A
Sbjct: 62 -DVTDDSLQGRMRRLTERAVDMADICLFMVDARVGITPTDLVFADILRKRAGHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ +LY L P + Y R D
Sbjct: 119 NKSEGAAADAGVI-----EAYSLGLGEPIRLSAEHGEGLNDLYTHLMPLADAYAERAAED 173
Query: 302 SCTQNNSSTQDVTSPED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + + +D E + PLQ+A+VGRPN GKSTL+N +L EDR+L GPEAG
Sbjct: 174 APEIDVTLDEDSGDMEAAIRMPTANKPLQVAVVGRPNSGKSTLVNQILGEDRLLTGPEAG 233
Query: 358 LTRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
+TRD++ + ++ G + + DTAG ++ K ++ LSV + + A VV +
Sbjct: 234 ITRDAISLRMDWVGPEGDVIPMRIFDTAGMRKKAKVQEKLEKLSVGDGLRAVKFAEVVVV 293
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+LDA +++R A EGR +VV VNK D+ +Q A K ++E+ + ++
Sbjct: 294 LLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEENKQ--AKLKDLRES----FERLL 347
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQS 520
PQ+ G P+V SA GRG + ++ Y+ W R+ T++LNRWL ++ H Q
Sbjct: 348 PQLRGAPLVTVSARTGRGLDRLHTAILRAYEVWNRRVTTAQLNRWLAGMLEAHPPPAPQG 407
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 408 KRIKLRYMTQAKTRPPGFVVMCSHPDKVPESYSRYLVNGLRVDFDMPGAPIRLWMR---- 463
Query: 581 KCGSSSSRQNTGQK 594
G + S G+K
Sbjct: 464 --GQNDSNPYKGRK 475
>gi|58040398|ref|YP_192362.1| GTP-binding protein EngA [Gluconobacter oxydans 621H]
gi|58002812|gb|AAW61706.1| GTP-binding protein [Gluconobacter oxydans 621H]
Length = 463
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 261/481 (54%), Gaps = 60/481 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+A+V + P VTRD +EG A L R +++D+AG
Sbjct: 10 LPVVVIAGRPNVGKSTLFNRLVGRRQAIVSDMPG--VTRDRKEGEALLRGRRVRLIDTAG 67
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R + + +A +F ID RSG+ P D WLR+ Q +P++
Sbjct: 68 LE-EAAPDTLYGRMRASSESAVAMADLVLFCIDARSGITPADAHFASWLRR---QNRPVL 123
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPSVEDY 294
+ NK E GT AA E+ LG G P+A+SAE G G M E+ E L P+ +
Sbjct: 124 LIANKAEG-QAGTN----AALEAYSLGLGTPLALSAEHGEGIADLMGEIAERLPPAEKS- 177
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
ED+ PL+LAI+GRPN GKSTLLN LL E+R++ GP
Sbjct: 178 -----------RRREAPKAEGEEDERPAGPLRLAIIGRPNAGKSTLLNCLLGEERMITGP 226
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAGLTRDS+ V + + LVDTAG +R + E+ +SV S + L A VV LV+
Sbjct: 227 EAGLTRDSITVELHDEHGPIQLVDTAGMRKRARVEQHLEKMSVSASIEALKMAEVVVLVI 286
Query: 414 DA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R +E EGR V+ +NK D + R + K+A+ ++ + Q
Sbjct: 287 DATLGVHEQDLQIGRLIEREGRACVIALNKWDAVEDRNAT------KKAILDRLEISLAQ 340
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V GIPVV SAL G G ++ V + Y+ W R+ T LNRW + RH QP
Sbjct: 341 VRGIPVVTFSALTGAGVHRLLPAVREVYEIWNSRVSTGELNRWFEDALERH-------QP 393
Query: 524 --------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
K++Y TQVKARPPTF+ F + + L D+ R+L L+E F + G+P+R+
Sbjct: 394 PLVDGRRLKLRYMTQVKARPPTFLLFGTRAEQLPDSYKRYLVNGLRETFHMPGVPVRLQL 453
Query: 576 R 576
R
Sbjct: 454 R 454
>gi|407975849|ref|ZP_11156752.1| GTP-binding protein Der [Nitratireductor indicus C115]
gi|407428710|gb|EKF41391.1| GTP-binding protein Der [Nitratireductor indicus C115]
Length = 475
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 271/474 (57%), Gaps = 39/474 (8%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
IIGRPNVGKS LFNRL RR A+V +TP VTRD R AKL DLRF+V+D+AGLE+ A
Sbjct: 7 IIGRPNVGKSTLFNRLAGRRLAIVDDTP--GVTRDRRSHPAKLQDLRFEVIDTAGLES-A 63
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM-NK 243
+ ++ R T + + A+F+ID R+G+ P D LR+ KP+V + NK
Sbjct: 64 AAPTLEGRMRAQTEIAIDEADIALFVIDARAGVMPDDSTFADLLRRKG---KPVVLVANK 120
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLNDS 302
+ + A ++ LG GDP+AISAE GLGM++L +A+ ++ ED L +
Sbjct: 121 TD-----VNAAAAGVIDAWGLGLGDPVAISAEHGLGMSDLRDAIVEALGEDVALAEETEP 175
Query: 303 CT---QNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + +DV PE +E+ PL++A++GRPNVGKSTL+NAL+ +DR+L GPE
Sbjct: 176 VAMPGEEIAVGEDV-DPEAEEAPYDATKPLRIAVMGRPNVGKSTLINALIGQDRMLTGPE 234
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALVLD 414
AG+TRDS+ V +E++GR + L DTAG ++ + + LSV + A VV +V D
Sbjct: 235 AGITRDSISVDWEWRGRKIKLFDTAGLRRKARVQAKLEKLSVADGIRAARFAEVVIIVFD 294
Query: 415 A------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A ++++ + EGR V+ NK DL+ RQ R ++ + ++PQV
Sbjct: 295 ATIPFEKQDLQIADLVIREGRAPVIAFNKWDLIEDRQEMLAELR------EKTERLLPQV 348
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G+ V SA GRG ++ V T++ W R+ T RLNRWL +H + +
Sbjct: 349 RGLQAVPISAETGRGLDKLLEAVEKTHRTWNSRVSTGRLNRWLEGATAQHPPPAVAGRRL 408
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQ+K RPP FV S + + +R+L L+E F+L G+PIR+ R+
Sbjct: 409 KVKYITQIKTRPPGFVVSCSRPDAMPQSYVRYLVNGLRETFNLFGVPIRVALRT 462
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 107 EKPVDFTKIDINLLPT-VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLA 165
E P D TK P + ++GRPNVGKS L N LI + L P+ +TRD
Sbjct: 195 EAPYDATK------PLRIAVMGRPNVGKSTLINALIGQDRML--TGPEAGITRDSISVDW 246
Query: 166 KLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPL---DL 222
+ + K+ D+AGL +A + L++ + A+ + +FA +I V P DL
Sbjct: 247 EWRGRKIKLFDTAGLRRKARVQAKLEKLS--VADGIRAARFAEVVIIVFDATIPFEKQDL 304
Query: 223 EVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLML-----GFGDPIAISAETG 277
++ + + P++A NK + + + LA ++ L G + ISAETG
Sbjct: 305 QIADLVIREGRA--PVIAFNKWDLIEDRQEMLAELREKTERLLPQVRGL-QAVPISAETG 361
Query: 278 LGMTELYEALRPSVEDYMLRV 298
G+ +L EA+ + + RV
Sbjct: 362 RGLDKLLEAVEKTHRTWNSRV 382
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +LAI+GRPNVGKSTL N L +V G+TRD + Q ++DTAG
Sbjct: 1 MAFKLAIIGRPNVGKSTLFNRLAGRRLAIVDDTPGVTRDRRSHPAKLQDLRFEVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLM--RAHVVALVLDAEEVRAVEE----------GRGLVVI 430
E P M+++ + A + V+DA ++ G+ +V++
Sbjct: 61 ---ESAAAPTLEGRMRAQTEIAIDEADIALFVIDARAGVMPDDSTFADLLRRKGKPVVLV 117
Query: 431 VNKMDL 436
NK D+
Sbjct: 118 ANKTDV 123
>gi|427410559|ref|ZP_18900761.1| GTPase Der [Sphingobium yanoikuyae ATCC 51230]
gi|425711102|gb|EKU74118.1| GTPase Der [Sphingobium yanoikuyae ATCC 51230]
Length = 454
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 269/476 (56%), Gaps = 46/476 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRREGEAHLLGLDFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E S+ R T + A+FM+D R+G+ PLD E+ +WLR+ + I
Sbjct: 59 GYEDEDPH-SLPGRMRMQTQAAVENCDVALFMVDARAGITPLDEEIARWLREGDAPV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G + AG E+ +LG G+PI SAE G G+ +L++AL P +E
Sbjct: 116 LVANKAE----GKATEAGVM-EAFILGLGEPIPFSAEHGQGLADLFQALLPYLE------ 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + ED+ES PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG+
Sbjct: 165 ------REDGEEHEKEFYEDEESA-PLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGI 217
Query: 359 TRDSVRVHF---EYQG--RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ V + Y+G R V L+DTAG +R K + L+V + A VV L+
Sbjct: 218 TRDSIAVDWMWTSYEGEERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVLL 277
Query: 413 LD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD A+++R +EEGR L+V +NK D + SALY+ +K+A+ +
Sbjct: 278 LDATRGLEAQDLRIADKVLEEGRALIVALNKWDTVE--HGSALYQGIKQALFDGLA---- 331
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ SA G+G ++ +T W R+ T LNRW + + + +
Sbjct: 332 QVRGVPIMTVSAATGKGLDDLIKVAFETRTAWSQRISTGVLNRWFEAALEANPPPAPAGK 391
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 392 RIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRS 447
>gi|398384407|ref|ZP_10542437.1| ribosome-associated GTPase EngA [Sphingobium sp. AP49]
gi|397722566|gb|EJK83102.1| ribosome-associated GTPase EngA [Sphingobium sp. AP49]
Length = 455
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 265/476 (55%), Gaps = 46/476 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQPG--VTRDRREGEAHLLGLEFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E S+ R T + A+FM+D R+G+ PLD E+ +WLR+ + I
Sbjct: 59 GYEDEDPH-SLPGRMRMQTQAAVENCDVALFMVDARAGITPLDEEIARWLREGDAPV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G + E+ +LG G+PI SAE G G+ +L++AL P +E
Sbjct: 116 LVANKAEGKSTEAGVM-----EAFILGLGEPIPFSAEHGQGLADLFQALLPHLE------ 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + ED+ES PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG+
Sbjct: 165 ------REDGEEHEKEFYEDEESA-PLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGI 217
Query: 359 TRDSVRVHF-----EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ V + E + R V L+DTAG +R K + L+V + A VV L+
Sbjct: 218 TRDSIAVDWMWTSHEGEERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVLL 277
Query: 413 LD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD A+++R +EEGR LVV +NK D + SALY+ +K+A + +
Sbjct: 278 LDATRGLEAQDLRIADKVLEEGRALVVALNKWDTVE--HGSALYQGIKQA----LFDGLA 331
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ SA G+G ++ +T W R+ T LNRW + + +
Sbjct: 332 QVRGVPIMTVSAATGKGLDDLIKVAFETRTAWSQRISTGVLNRWFEAALEANPPPAPGGK 391
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 392 RIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRS 447
>gi|395778580|ref|ZP_10459092.1| GTPase Der [Bartonella elizabethae Re6043vi]
gi|423715108|ref|ZP_17689332.1| GTPase Der [Bartonella elizabethae F9251]
gi|395417788|gb|EJF84125.1| GTPase Der [Bartonella elizabethae Re6043vi]
gi|395430592|gb|EJF96634.1| GTPase Der [Bartonella elizabethae F9251]
Length = 474
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 275/490 (56%), Gaps = 41/490 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQRLALVDDKP--GVTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKAAIDEADLVLFMFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL- 299
NK ES + G E+ LG G+P ISAE GLG+++L +A+ +V R L
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIIDAVGAE--RALG 170
Query: 300 ----NDSCTQNNSSTQDVTSPEDD----ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D Q S DV + E++ + + P+++AI GRPN GKSTL+N++L++DR+L
Sbjct: 171 NNKEEDMTIQPASVGDDVNNSEEEGGMYDERKPIRIAIAGRPNTGKSTLINSMLKQDRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E+ GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 231 TGPEAGLTRDSISVDWEWDGRQIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 290
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR V+ NK DL+ Q + + + ++
Sbjct: 291 IVFDATIPFEKQDLQIADLVIREGRVPVIAFNKWDLIENSQATLI------DLHEKCARF 344
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T++LN+WL V+ H S
Sbjct: 345 LPQVRGLRAVPLSGQYGQGIDKLMENVMIIHRVWNRRISTAKLNQWLETVVAHHPPPAVS 404
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+ K+KY TQVK RPP F+ S + + + LR+L L+E FD+ G+P+R++ R+
Sbjct: 405 GRRLKVKYITQVKTRPPGFMISCSRPQVMPQSYLRYLINGLRETFDMAGVPVRLSLRASD 464
Query: 580 RKCGSSSSRQ 589
+ S ++
Sbjct: 465 NPFATRSKKK 474
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQRLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + A +V + DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKAAIDEADLVLFMFDAK 93
>gi|86358709|ref|YP_470601.1| GTP-binding protein EngA [Rhizobium etli CFN 42]
gi|123511179|sp|Q2K5L2.1|DER_RHIEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86282811|gb|ABC91874.1| GTP-binding protein [Rhizobium etli CFN 42]
Length = 473
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 275/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIGKDRAYAKE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ ++N + +D P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DVAVTDVDIPPSENEADGED-EEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|381202403|ref|ZP_09909518.1| GTP-binding protein Der [Sphingobium yanoikuyae XLDN2-5]
Length = 454
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 268/476 (56%), Gaps = 46/476 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRREGEAHLLGLDFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E S+ R T + A+FM+D R+G+ PLD E+ +WLR+ + I
Sbjct: 59 GYEDEDPH-SLPGRMRMQTQAAVENCDVALFMVDARAGITPLDEEIARWLREGDAPV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G + AG E+ +LG G+PI SAE G G+ +L++AL P +E
Sbjct: 116 LVANKAE----GKATEAGVM-EAFILGLGEPIPFSAEHGQGLADLFQALLPYLE------ 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + ED+ES PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG+
Sbjct: 165 ------REDGEEHEKEFYEDEESA-PLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGI 217
Query: 359 TRDSVRVHF---EYQG--RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ V + Y+G R V L+DTAG +R K + L+V + A VV L+
Sbjct: 218 TRDSIAVDWMWTSYEGEERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVLL 277
Query: 413 LD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD A+++R +EEGR L+V +NK D + SALY+ +K+A+ +
Sbjct: 278 LDATRGLEAQDLRIADKVLEEGRALIVALNKWDTVE--HGSALYQGIKQALFDGLA---- 331
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ SA G+G ++ +T W R+ T LNRW + + +
Sbjct: 332 QVRGVPIMTVSAATGKGLDDLIKVAFETRTAWSQRISTGVLNRWFEAALEANPPPAPGGK 391
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 392 RIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRS 447
>gi|398354567|ref|YP_006400031.1| GTPase Der [Sinorhizobium fredii USDA 257]
gi|390129893|gb|AFL53274.1| GTPase Der [Sinorhizobium fredii USDA 257]
Length = 476
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/477 (37%), Positives = 271/477 (56%), Gaps = 38/477 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R T + + ++F+ID ++GL P D + + LR+ + IV
Sbjct: 62 QSAPD-SLQGRMWAQTEQAIDEADLSLFVIDAKAGLTPADETLAEMLRRRGKPV--IVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSVE 292
NK E+ + G ++ LG G+P ISAE G GM +L +A+ P E
Sbjct: 119 NKSEARGSD-----GGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPAE 173
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D ++ T + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 174 DVAETDVDIRPTGADEGDDEEAEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GR + + DTAG ++ K ++ LSV + + + A V +
Sbjct: 233 GPEAGITRDSISVEWDWRGRAIKMFDTAGMRRKAKVQQKLEKLSVADALRAIRFAETVVI 292
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+ DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 293 IFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVEDWQ--AVLADLRE----KTERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 347 PQARGIRAVPISGHTGYGLDRLMQAIIETDRVWNRRISTARLNRWLESQQVQHPPPAVSG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ +R+L L+ DFD+ G+PIRI R+
Sbjct: 407 RRLKLKYMTQVKARPPGFMISCTRPEAVPESYVRYLINGLRHDFDMPGVPIRIHFRT 463
>gi|254450380|ref|ZP_05063817.1| GTP-binding protein [Octadecabacter arcticus 238]
gi|198264786|gb|EDY89056.1| GTP-binding protein [Octadecabacter arcticus 238]
Length = 489
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 274/498 (55%), Gaps = 38/498 (7%)
Query: 126 IGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEAT 185
+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+D+AGLE EAT
Sbjct: 1 MGRPNVGKSTLFNRLVCKKLALVDDQP--GVTRDLREGAARLGDLRFTVIDTAGLE-EAT 57
Query: 186 SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCE 245
S+ R +T + +FM D R G+ P D LRK + ++ I+A NK E
Sbjct: 58 DESLQGRMRALTERAVEMADVCLFMYDARMGIMPADEVFADILRKKSAKV--ILAANKSE 115
Query: 246 SLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQ 305
G + G LG G+PI +SAE G G++E+Y+ L P + + R D+
Sbjct: 116 GRAADAGVIEG-----FNLGLGEPIRLSAEHGEGLSEMYDVLMPISDAFEERAAADAPDV 170
Query: 306 NNSSTQD--VTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 363
+ +D P PLQ+A+VGRPN GKSTL+N +L EDR+L GPEAG+TRD++
Sbjct: 171 DVEVNEDNEEDGPRVPTKAKPLQIAVVGRPNAGKSTLINQILGEDRLLTGPEAGITRDAI 230
Query: 364 RVHFEY--QGRT--VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
V ++ +G T V + DTAG +R K ++ LSV + + A VV +++D E
Sbjct: 231 SVQMDWGPEGATVPVRIFDTAGIRKRAKVQEKLEKLSVADGLRAVKFAEVVVILIDVEIP 290
Query: 417 ----EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
++R A EGR +V+ VNK D+ +Q A K ++E + ++PQ+ G P
Sbjct: 291 FEQQDLRLADLAEREGRAVVLAVNKWDVEGEKQ--AKLKELQE----QFTRLLPQLKGAP 344
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+V SA GRG + ++ ++ W R+ T++LNRWL + H + K++Y
Sbjct: 345 LVTVSAKTGRGIDRLQEAILKAHEVWNRRITTAQLNRWLMGMTEAHPPPAPGGRRIKMRY 404
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV----PRKCG 583
TQVK RPP FV S L ++ R+L L+ DFD+ G PIR+ RS P K
Sbjct: 405 ATQVKTRPPGFVVMCSHPDMLPESYSRYLVNGLRLDFDMPGTPIRLHFRSQSDKNPYKNN 464
Query: 584 SSSSRQNTGQKVGRTFSD 601
+ S+ + +G+ +D
Sbjct: 465 TKSTPSRLRKHLGKAPAD 482
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG----DLRFKVLDSA 178
+ ++GRPN GKS L N+++ E + P+ +TRD G + ++ D+A
Sbjct: 194 IAVVGRPNAGKSTLINQIL--GEDRLLTGPEAGITRDAISVQMDWGPEGATVPVRIFDTA 251
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
G+ A L++ + A+ L +FA + +IDV DL + + +
Sbjct: 252 GIRKRAKVQEKLEKLS--VADGLRAVKFAEVVVILIDVEIPFEQQDLRLADLAEREGRAV 309
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLML---GFGDP-IAISAETGLGMTELYEALRPSV 291
++A+NK + L + L G P + +SA+TG G+ L EA+ +
Sbjct: 310 --VLAVNKWDVEGEKQAKLKELQEQFTRLLPQLKGAPLVTVSAKTGRGIDRLQEAILKAH 367
Query: 292 EDYMLRV 298
E + R+
Sbjct: 368 EVWNRRI 374
>gi|424871811|ref|ZP_18295473.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393167512|gb|EJC67559.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 473
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 274/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ R E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEDRAYPEK 172
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ V + Q++ + P D++K PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 EDVAVTDVDIPQSSDEGDEDEEPTYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVAL 411
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V +
Sbjct: 232 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQAIIDTDKVWNKRISTARLNRWLETQQVQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|423714106|ref|ZP_17688365.1| GTPase Der [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395421253|gb|EJF87509.1| GTPase Der [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 474
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/479 (37%), Positives = 273/479 (56%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSHTKAAIEEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+T+L +A+ ++ R
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLTDLRDAIVDAIGTQ--RAFE 170
Query: 301 DSCTQNNSSTQDVTSPED----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + N S Q + +D DESK P+++AI GRPN GKSTL+N++L++DR+
Sbjct: 171 SNKEEENISIQPASVGDDVGDLEEGLVYDESK-PIRIAIAGRPNTGKSTLINSMLKQDRL 229
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 230 LTGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVV 289
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ + EGR ++ NK DL+ Q + + + ++
Sbjct: 290 VIVFDATAPFEKQDLQIADLVICEGRVPLIAFNKWDLIENSQVTLI------DLHEKCSR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQV G+ V S G+G +M ++ ++ W R+ T +LNRWL V+ H
Sbjct: 344 LLPQVRGLRAVPLSGQYGQGIDKLMENIMMMHRVWNRRISTGKLNRWLETVVAHHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQ+K RPP FV S + + + LR+L+ L++ FD+ G+PIRI+ R+
Sbjct: 404 SGRRLKVKYITQIKTRPPGFVISCSRPQVMPQSYLRYLSNGLRDAFDMPGVPIRISLRT 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H A + +A+
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKAAIEEAD 84
>gi|85703427|ref|ZP_01034531.1| GTP-binding protein EngA [Roseovarius sp. 217]
gi|85672355|gb|EAQ27212.1| GTP-binding protein EngA [Roseovarius sp. 217]
Length = 487
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 283/494 (57%), Gaps = 42/494 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ +R ALV N P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGKRLALVDNQP--GVTRDLREGAARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +F+ID R+G+ P D + + LRK + + I+A
Sbjct: 62 -EATDESLQGRMRKLTERAVDMADVCLFLIDARAGVTPTDEILAEILRKRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN- 300
NK E G+ + AG E+ LG G+PI +SAE G G+ +LY L P + + R
Sbjct: 119 NKAE----GSAADAGVI-EAWGLGLGEPIRLSAEHGEGLNDLYSQLMPLSDAFEKRAEAE 173
Query: 301 ----DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
D + + +D+T + +++ P+Q+A+VGRPN GKSTL+N +L E+R+L GPEA
Sbjct: 174 APEVDVALEEDEDDEDLTYRKPTKAR-PMQVAVVGRPNAGKSTLINKILGEERLLTGPEA 232
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRD++ + ++ G V + DTAG ++ + + LSV + + A VV ++LDA
Sbjct: 233 GITRDAISLQIDWDGLPVRIFDTAGMRKKARIQDKLEKLSVSDGLRAVKFAEVVVVLLDA 292
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++R A EGR +VV +NK D+ + + + ++EA + ++PQ+
Sbjct: 293 AIPFEQQDLRIADLAEREGRAVVVAINKWDMEPDKSDK--IRELREA----FERLLPQLR 346
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-K 524
G P+V SA G+G + V ++ W R+ T++LNRWL ++ +H + K
Sbjct: 347 GAPLVTVSAKTGKGLDRLRDAVSKAHEVWNRRVTTAQLNRWLVGMLEQHPPPAPGGKRVK 406
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS------- 577
++Y TQ K RPP FV S + L ++ R+L L+ DFD+ G PIR+ RS
Sbjct: 407 LRYMTQAKTRPPGFVVMCSHPEKLPESYSRYLVNGLRTDFDMPGTPIRLYFRSQADKNPY 466
Query: 578 -VPRKCGSSSSRQN 590
+K G SS R++
Sbjct: 467 KAKKKAGPSSLRKH 480
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGKRLALVDNQPGVTRDLREGAARLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ E + + R M A V ++DA
Sbjct: 61 EEATDESLQGRMRKLTERAVDM-ADVCLFLIDA 92
>gi|338739998|ref|YP_004676960.1| GTP-binding protein EngA, GTPase [Hyphomicrobium sp. MC1]
gi|337760561|emb|CCB66394.1| GTP-binding protein EngA, GTPase [Hyphomicrobium sp. MC1]
Length = 489
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 260/473 (54%), Gaps = 38/473 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V I+GRPNVGKS LFNRL R ALV + P +TRD REG+A L + +++D+AG
Sbjct: 30 MPVVAIVGRPNVGKSTLFNRLTATRAALVSDLPG--LTRDRREGIANLFGVDVRLVDTAG 87
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA GSI DR + +++ +F+ID R+G+ D + R+ KP+V
Sbjct: 88 LE-EAQRGSIADRMRKQSEQAISEADLVLFVIDARAGVTSADTGFARIARQSG---KPVV 143
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G L ++ LG G PIAISAE G G+ +L E + + L +
Sbjct: 144 LVANKAEGNKGTDGVL-----DAFSLGLGAPIAISAEHGEGIGDLAEDMLAA-----LGL 193
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKL---PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ T+ D + E P+++AIVGRPN GKSTL+NALL E+R++ GPE
Sbjct: 194 KSAPTTKKRRKGDDAEEEKPIERPAVVKPIRVAIVGRPNAGKSTLVNALLGEERMITGPE 253
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLD 414
GLTRDSV FE++G+ + L DTAG ++ K A LS + + + A VV L++D
Sbjct: 254 PGLTRDSVSTDFEWKGQKIRLFDTAGLRRKAKITETAEKLSASDAVRAIRFAEVVVLLID 313
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AE R EEGR LVV VNK DL+ +Q + + +K+ V + + QV
Sbjct: 314 AERPFEHQDLTIGHRVTEEGRALVVAVNKWDLVEEKQKT--LRELKKTVAESLA----QV 367
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQP 523
+P V SA G +M + Y W R+ T +LNRWL + + RHS +
Sbjct: 368 PDVPFVAISARSESGLDQLMTAISKIYATWNRRVSTPQLNRWLNEALSRHSPPAVHGKRI 427
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI+Y TQ RPPTFVAF + L + +++LT SL++ FDL G+PIR + R
Sbjct: 428 KIRYVTQPSTRPPTFVAFSQRAEALPQSYVKYLTNSLRDTFDLPGVPIRFSLR 480
>gi|94495668|ref|ZP_01302248.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58]
gi|94425056|gb|EAT10077.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58]
Length = 456
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/482 (37%), Positives = 264/482 (54%), Gaps = 44/482 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRREGEAHLLGLDFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E S+ R T + A+F++D R+G+ PLD E+ +WLR+ + +
Sbjct: 59 GYEDEDPQ-SLPGRMRIQTEAAVDNCDVALFLVDARAGITPLDEEIARWLREGDAPV--V 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E + G E+ LG G+PI SAE G GM +L++AL P ++ R
Sbjct: 116 LVANKAEGRAS-----EGGVMEAFGLGLGEPIPFSAEHGQGMADLFQALLPHLD----RE 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + S E D PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG+
Sbjct: 167 EEEEPEADGDS-------EADMENAPLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGI 219
Query: 359 TRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ V + + R V L+DTAG +R K + L+V + A VV L+
Sbjct: 220 TRDSIAVDWSWTSREGLERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVLL 279
Query: 413 LD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD A+++R +EEGR LV+ +NK D + SALY+ +K+A + +
Sbjct: 280 LDSTRGLEAQDLRIADKVLEEGRALVIALNKWDTVD--NGSALYQGIKQA----LSDGLA 333
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ SA G+G ++H +T W R+ T LNRW + + + +
Sbjct: 334 QVRGVPIMTVSAATGKGLDDLIHVAFETRTAWSQRISTGILNRWFERALEANPPPAPGGK 393
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 394 RIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRSAKNP 453
Query: 582 CG 583
G
Sbjct: 454 FG 455
>gi|347759861|ref|YP_004867422.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
gi|347578831|dbj|BAK83052.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
Length = 476
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 264/487 (54%), Gaps = 44/487 (9%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
F ++ LP V+I GRPNVGKS +FNRL+ RR+ALV +TP VTRD +EG A +
Sbjct: 5 FPSAPVDALPVVVIAGRPNVGKSTIFNRLVGRRQALVADTP--GVTRDRKEGQATVRGRN 62
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+++D+AGLE EA ++ R + + +A +F ID RSG+ P D WLR+
Sbjct: 63 IRIIDTAGLE-EAAPDTLYGRMRASSESAVADADLVLFCIDARSGITPADQHFANWLRR- 120
Query: 232 APQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEA 286
Q +P++ + NK E A AA E+ LG G P+AISAE G G M E+ +
Sbjct: 121 --QGRPVLLIANKAEGRQG-----AAAAMEAFSLGLGAPLAISAEHGEGIADLMAEIVDR 173
Query: 287 LRPS----VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
L P+ V+ R+ + + +DV P PL+LAIVGRPN GKSTLLN
Sbjct: 174 LPPTDAPPVQKNTRRLRREQAESADGEVEDVRPPG------PLRLAIVGRPNAGKSTLLN 227
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
LL E+R++ GPE GLTRDS+ V + LVDTAG ++ + ++ +SV S +
Sbjct: 228 RLLGEERMITGPEPGLTRDSIAVMLSDDEGPIQLVDTAGLRRKARIDETLEKMSVSASIE 287
Query: 402 NLMRAHVVALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKE 451
L A VV LVLDA + R +E EGR V+ +NK D + R + ++
Sbjct: 288 ALKMAEVVILVLDATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRAET------RQ 341
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
A+ I+ + Q+ GIPVV SA+ G G ++ V Y+ W R+ T LNRW ++
Sbjct: 342 AIKDRIEMSLAQMRGIPVVAFSAMTGAGINKLLPTVRRAYEVWNRRVATGALNRWFEMMI 401
Query: 512 GRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
RH + K++Y TQ K+RPPTF+ F + L + R+L L+E FDL G P
Sbjct: 402 ERHPPPLVDGRRLKLRYITQAKSRPPTFIVFGTRTDQLPEDYQRYLVNGLRETFDLPGTP 461
Query: 571 IRITQRS 577
IR+ R+
Sbjct: 462 IRLLLRA 468
>gi|149204177|ref|ZP_01881145.1| GTP-binding protein EngA [Roseovarius sp. TM1035]
gi|149142619|gb|EDM30664.1| GTP-binding protein EngA [Roseovarius sp. TM1035]
Length = 488
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 282/495 (56%), Gaps = 43/495 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
+V I+GRPNVGKS LFNRL+ +R ALV N P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 SVAIVGRPNVGKSTLFNRLVGKRLALVDNQP--GVTRDLREGAARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D + + LRK + + I+A
Sbjct: 62 -DATDESLQGRMRKLTERAVDMADICLFVIDARTGVTPTDESLAEILRKRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP------SVEDYM 295
NK E G+ + AG E+ LG G+PI +SAE G G+ +LY L P +
Sbjct: 119 NKAE----GSAADAGVI-EAWGLGLGEPIRMSAEHGEGLNDLYSQLMPLADAFEARAAAE 173
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ S ++ +DV+ + E++ P+Q+A+VGRPN GKSTL+N +L E+R+L GPE
Sbjct: 174 APEVDVSLDEDIEDDEDVSYRKPTEAR-PMQVAVVGRPNAGKSTLINKILGEERLLTGPE 232
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRD++ + ++ G V + DTAG ++ K + LSV + + A VV ++LD
Sbjct: 233 AGITRDAISLRIDWDGMPVRIFDTAGMRKKAKVQDKLEKLSVSDGLRAVKFAEVVVVLLD 292
Query: 415 A------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++R A EGR +VV +NK D+ + + + ++EA + ++PQ+
Sbjct: 293 AAIPFEQQDLRIADLAEREGRAVVVAINKWDMEPDKSDK--IRELREA----FERLLPQL 346
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA G+G + V ++ W R+ T++LNRWL ++ +H +
Sbjct: 347 RGAPLVTVSAKTGKGLDRLRDAVAKAHEVWNRRVTTAQLNRWLIGMLEQHPPPAPGGRRV 406
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS------ 577
K++Y TQ K RPP FV S L ++ R+L L+ DFD+ G PIR+ RS
Sbjct: 407 KLRYMTQAKTRPPGFVVMCSHPDKLPESYSRYLVNGLRADFDMPGTPIRLYFRSQADRNP 466
Query: 578 --VPRKCGSSSSRQN 590
+K G SS R++
Sbjct: 467 YKSKKKAGPSSLRKH 481
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +AIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MTFSVAIVGRPNVGKSTLFNRLVGKRLALVDNQPGVTRDLREGAARLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
E + + R M A + V+DA
Sbjct: 61 EDATDESLQGRMRKLTERAVDM-ADICLFVIDA 92
>gi|417108936|ref|ZP_11963007.1| GTP-binding protein [Rhizobium etli CNPAF512]
gi|327189207|gb|EGE56387.1| GTP-binding protein [Rhizobium etli CNPAF512]
Length = 473
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 277/488 (56%), Gaps = 40/488 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMIDLRDAIVAAIGKDRAYAKE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ ++N + +D P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DIAVTDVDIPPSENEADGED-EEPIYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRSAEN 464
Query: 581 KCGSSSSR 588
S R
Sbjct: 465 PYESKKKR 472
>gi|116253295|ref|YP_769133.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. viciae 3841]
gi|166225846|sp|Q1MDD6.1|DER_RHIL3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115257943|emb|CAK09041.1| putative engA GTP-binding protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 473
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 272/476 (57%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEDRAYPEK 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL-----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
D + Q ++DE + PL++AIVGRPN GKSTL+N L EDR+L GP
Sbjct: 173 EDVAVTDVDIPQSSDEGDEDEEPIYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLTGP 232
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALV 412
EAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V +V
Sbjct: 233 EAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T+RLNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQAIIDTDKVWNKRISTARLNRWLETQQVQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|418400758|ref|ZP_12974295.1| GTP-binding protein Der [Sinorhizobium meliloti CCNWSX0020]
gi|359505245|gb|EHK77770.1| GTP-binding protein Der [Sinorhizobium meliloti CCNWSX0020]
Length = 476
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 274/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E++ S+ R T + + ++F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -ESSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADQTLAEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED ++ + + DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAETNVDIRPVAGEGTEDEEVESAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q AL ++E + + +
Sbjct: 292 IVFDATVPFEKQDLQIVDLVLREGRAAVLAFNKWDLVENWQ--ALLVDLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIR+ R+
Sbjct: 406 GRRLKLKYMTQVKARPPGFMVSCTRPEAVPESYTRYLINGLRNDFDLPGVPIRVHFRA 463
>gi|418407283|ref|ZP_12980601.1| GTP-binding protein Der [Agrobacterium tumefaciens 5A]
gi|358006427|gb|EHJ98751.1| GTP-binding protein Der [Agrobacterium tumefaciens 5A]
Length = 476
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 276/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVVDAKAGLTPADETLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS AG ++ LG GDP AISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGDPCAISAEHGQGMIDLRDAIVEAIGEDVAFPPE 172
Query: 300 NDSC--------TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D T+ S ++ P DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 VDEAETDIVLPRTEPGSEEEEEEEPVYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV S +++ A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADSLRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D+ ++++ V+ EGR V+ NK DL+ Q A ++E + + +
Sbjct: 292 IVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AFLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T++LNRWL +H S
Sbjct: 346 LPQARGIRAVPMSGQTGYGLDRLMQNIIDTDKIWNRRISTAKLNRWLDAQTTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+ R
Sbjct: 406 GRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYR 462
>gi|408787806|ref|ZP_11199532.1| GTP-binding protein Der [Rhizobium lupini HPC(L)]
gi|424911021|ref|ZP_18334398.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392847052|gb|EJA99574.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|408486270|gb|EKJ94598.1| GTP-binding protein Der [Rhizobium lupini HPC(L)]
Length = 476
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 274/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + +F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDDADVTLFVVDAKAGLTPADETLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS AG ++ LG GDP ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGDPCPISAEHGQGMIDLRDAIVEAIGEDVAFPPE 172
Query: 300 NDSC--------TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D ++ S ++ P DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 VDEAETDIVLPRSEPGSEDEEDEEPVYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K + LSV S +++ A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D+ ++++ V+ EGR V+ NK DL+ Q A ++E + + +
Sbjct: 292 IVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AYLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGQTGYGLDRLMQNIIDTDKVWNRRISTARLNRWLDAQTTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+ R
Sbjct: 406 GRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYR 462
>gi|424882736|ref|ZP_18306368.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392519099|gb|EIW43831.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 474
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 273/478 (57%), Gaps = 41/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEDRAYPAK 172
Query: 300 NDSCTQNNSSTQ-------DVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + Q + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAVTDVDIPQTEGEDSDEDEEPTYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V
Sbjct: 232 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETVV 290
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + +
Sbjct: 291 IVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRL 344
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 LPQARGIRAVPISGQTGWGLDKLMQSIIDTDKVWNKRISTARLNRWLETQQVQHPPPAVS 404
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 GRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 462
>gi|240850057|ref|YP_002971450.1| GTP-binding protein EngA [Bartonella grahamii as4aup]
gi|240267180|gb|ACS50768.1| GTP-binding protein EngA [Bartonella grahamii as4aup]
Length = 474
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 277/489 (56%), Gaps = 39/489 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSHTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDYMLR 297
NK ES + G E+ LG G+P ISAE GLG+++L +A+ +V +
Sbjct: 118 ANKSESR-----AATGGEYEAWSLGLGEPCLISAEHGLGLSDLRDAIIDAVGSERAFGNN 172
Query: 298 VLNDSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D Q S + DV E+ DESK P+++AI GRPN GKSTL+N++L+++R+L
Sbjct: 173 KEEDITIQPASVSDDVNDLEEEELIYDESK-PIRIAIAGRPNTGKSTLINSMLKQERLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV +
Sbjct: 232 GPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVVI 291
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ + EGR V+ NK DL+ Q + + + ++ +
Sbjct: 292 VFDATIPFEKQDLQIADLVIREGRVPVIAFNKWDLIENSQTTLI------DLHEKCARFL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V S G+G +M V+ ++ W R+ T++LN+WL V+ H S
Sbjct: 346 PQVRGLRAVPLSGQYGQGIDKLMENVMMMHRVWNRRISTAKLNQWLGTVVAHHPPPAVSG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K+KY TQVK RPP F+ S +++ + LR+L L+E FD+ GIP+RI+ R+
Sbjct: 406 RRLKVKYITQVKTRPPGFMISCSRAQSMPQSYLRYLVNGLREKFDMSGIPVRISLRASDN 465
Query: 581 KCGSSSSRQ 589
+ S ++
Sbjct: 466 PFATRSKKK 474
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q +VDTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVVDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H A + +A+
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKAAIDEAD 84
>gi|393721530|ref|ZP_10341457.1| GTP-binding protein Der [Sphingomonas echinoides ATCC 14820]
Length = 465
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 261/482 (54%), Gaps = 51/482 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+++D+AG
Sbjct: 4 LPVVAIIGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDATLVGLDFRIIDTAG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + + S+ R T +A+ A+F+ D R+G+ PLD E+ +WLR + I+
Sbjct: 62 YEDQ-DAASLPGRMRAQTEAAVAQADVALFLFDSRTGIVPLDEEIARWLRGSTTPV--IL 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E G L ESL LGFGDP+ +SAE G G+ EL++AL P +E
Sbjct: 119 VANKAEGKAGADGIL-----ESLSLGFGDPVELSAEHGEGLVELFDALLPYIE------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDD---ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ D+ +D+ + PL+LAI+GRPN GKSTL+N +L EDR++ GPEA
Sbjct: 167 ----PDKDEYGADIPHADDEGEYSPEAPLKLAIIGRPNAGKSTLINRILGEDRLITGPEA 222
Query: 357 GLTRDSVRVHFEYQ---------GRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
G+TRDS+ V + + R V L+DTAG +R + LSV + + A
Sbjct: 223 GITRDSIAVDWVWHDPEREPGENARKVRLIDTAGMRKRANVQDKLEKLSVADALHAIDFA 282
Query: 407 HVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV L+LDA +++R A++EGR L+V +NK D+ S+L+ ++ A+ +
Sbjct: 283 EVVVLLLDATRGLESQDLRIADAALQEGRALIVAINKWDI--AENGSSLFNGIRGALEEG 340
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHS 515
+ Q+ G+PV+ S G+G ++ +T W R+ T LNRW K V
Sbjct: 341 LS----QIKGMPVLTVSGATGKGIDVLLKVAFETRDAWSRRVGTGELNRWFEKAVEANPP 396
Query: 516 WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ K++Y TQ K RPP FV F + L + R+L ++ D G +P+R+T
Sbjct: 397 PAPGGKRIKLRYLTQAKTRPPGFVLFGTRVDQLPTSYQRYLINGIRRDLGFGAVPVRLTL 456
Query: 576 RS 577
R+
Sbjct: 457 RA 458
>gi|418300799|ref|ZP_12912613.1| GTP-binding protein Der [Agrobacterium tumefaciens CCNWGS0286]
gi|355532965|gb|EHH02311.1| GTP-binding protein Der [Agrobacterium tumefaciens CCNWGS0286]
Length = 476
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 275/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVVDAKAGLTPADETLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS AG ++ LG GDP ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGDPCPISAEHGQGMIDLRDAIVEAIGEDAAFPPE 172
Query: 300 NDSC--------TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D ++ S ++ P DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 VDEAETDIVLPRSEPGSEDEEDEEPVYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K + LSV S +++ A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D+ ++++ V+ EGR V+ NK DL+ Q A ++E + + +
Sbjct: 292 IVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AYLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T++LNRWL +H S
Sbjct: 346 LPQARGIRAVPISGQTGYGLDRLMQNIIDTDKIWNRRISTAKLNRWLDSQTTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+ R
Sbjct: 406 GRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYR 462
>gi|182679273|ref|YP_001833419.1| GTP-binding protein EngA [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635156|gb|ACB95930.1| small GTP-binding protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 470
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 187/492 (38%), Positives = 276/492 (56%), Gaps = 48/492 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKLGDL FK++D+AGLE
Sbjct: 3 TIAIIGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDAKLGDLTFKIIDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + + F+ D R GL P D + +R+ KP+V +
Sbjct: 61 -EGHEETLSGRMRAQTEAAIEQADGIFFLFDARVGLTPEDRFFAQLVRRAG---KPLVLI 116
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ E LG GDP+ +SAE G G+ +LYEALR + +
Sbjct: 117 ANKAEGRVGTAGAI-----EGFDLGLGDPVPLSAEHGEGLADLYEALRENWPEE-----T 166
Query: 301 DSCTQNNSSTQDVTSPED-DESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ + + + +T ED D S+L PL++A+VGRPN GKSTLLN LL E+R+L GPE
Sbjct: 167 EAPDEAGPAEERLTLGEDEDGSELDLTKPLRIAVVGRPNAGKSTLLNRLLGEERLLTGPE 226
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AGLTRDS+ + E++GR + + DTAG +R K E L+ + + + A VV ++LD
Sbjct: 227 AGLTRDSIGLDLEWRGRKMKIFDTAGLRRRAKIEDKLEKLAAADALRAVRFAEVVVVLLD 286
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++ + EGR LV+ +NK DL+ G ++ R+ + +E ++PQV
Sbjct: 287 ATIPFEKQDLTIADLVEREGRALVIALNKWDLI-GADDAERAARLT-LLREEAGRLLPQV 344
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G PVV SA G +M + + W R+ T+RLNRWL + +Q+ P
Sbjct: 345 KGTPVVPVSATTAEGLDRLMAAIDKVHVIWNKRIATARLNRWLEGAL------EQTPPPA 398
Query: 524 ------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ++ARPP F+ F + L + RFL L++ FDL G+PIR+++++
Sbjct: 399 VSGRRIKIRYMTQLRARPPYFLLFGNQLDALPTSYERFLVNGLRQAFDLPGVPIRLSKKT 458
Query: 578 VPRKCGSSSSRQ 589
S +R+
Sbjct: 459 TDNPYASRKARK 470
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L +AI+GRPNVGKSTL N L+ + LV G+TRD + T ++DTAG L+
Sbjct: 2 LTIAIIGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGDAKLGDLTFKIIDTAG-LE 60
Query: 385 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKM 434
E+ + Q+ + +A + + DA E+ G+ LV+I NK
Sbjct: 61 EGHEETLSGRMRAQTEAAIEQADGIFFLFDARVGLTPEDRFFAQLVRRAGKPLVLIANKA 120
Query: 435 DLLSGRQNSA 444
+ GR +A
Sbjct: 121 E---GRVGTA 127
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGD 169
D +++D+ + ++GRPN GKS L NRL+ E + P+ +TRD I L G
Sbjct: 186 DGSELDLTKPLRIAVVGRPNAGKSTLLNRLL--GEERLLTGPEAGLTRDSIGLDLEWRGR 243
Query: 170 LRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGK 226
+ K+ D+AGL A L++ A A+ L +FA + ++D DL +
Sbjct: 244 -KMKIFDTAGLRRRAKIEDKLEKLA--AADALRAVRFAEVVVVLLDATIPFEKQDLTIAD 300
Query: 227 WLRKHAPQIKPIVAMNKCE 245
+ + + ++A+NK +
Sbjct: 301 LVEREGRAL--VIALNKWD 317
>gi|395792058|ref|ZP_10471497.1| GTPase Der [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432977|gb|EJF98951.1| GTPase Der [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 474
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 272/479 (56%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSHTKAAIEEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+T+L +A+ ++ R
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLTDLRDAIVDAIGTQ--RAFE 170
Query: 301 DSCTQNNSSTQDVTSPED----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + N Q + +D DESK P+++AI GRPN GKSTL+N++L++DR+
Sbjct: 171 SNKEEENIYIQPASVGDDVGDLEEGLVYDESK-PIRIAIAGRPNTGKSTLINSMLKQDRL 229
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 230 LTGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVV 289
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ + EGR ++ NK DL+ Q + + + ++
Sbjct: 290 VIVFDATAPFEKQDLQIADLVIREGRVPLIAFNKWDLIENSQVTLI------DLHEKCSR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQV G+ V S G+G +M ++ ++ W R+ T +LNRWL V+ H
Sbjct: 344 LLPQVRGLRAVPLSGQYGQGIDKLMENIMMMHRVWNHRISTGKLNRWLETVVAHHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQ+K RPP FV S + + + LR+L+ L++ FD+ G+PIRI+ R+
Sbjct: 404 SGRRLKVKYITQIKTRPPGFVISCSRPQVMPQSYLRYLSNGLRDAFDMPGVPIRISLRT 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H A + +A+
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKAAIEEAD 84
>gi|254439207|ref|ZP_05052701.1| GTPase, putative [Octadecabacter antarcticus 307]
gi|198254653|gb|EDY78967.1| GTPase, putative [Octadecabacter antarcticus 307]
Length = 496
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 275/502 (54%), Gaps = 38/502 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQPG--VTRDLREGAARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FM D R G+ P D LRK + ++ I+A
Sbjct: 62 -EATDESLQGRMRALTERAVEMADVCLFMYDARMGIMPADEVFADILRKKSAKV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + G LG G+PI +SAE G G++E+Y+ L P + + R D
Sbjct: 119 NKSEGRAADAGVIEG-----FNLGLGEPIRLSAEHGEGLSEMYDVLMPISDAFEERAAAD 173
Query: 302 SCTQNNSSTQDVT--SPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + +D P PLQ+A+VGRPN GKSTL+N +L EDR+L GPEAG+T
Sbjct: 174 APDVDVDVDEDNEEDGPRVPTKSKPLQIAVVGRPNAGKSTLINQILGEDRLLTGPEAGIT 233
Query: 360 RDSVRVHFEYQGRT----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
RD++ V ++ + V + DTAG +R K ++ LSV + + A VV +++D
Sbjct: 234 RDAISVQMDWGPESATVPVRIFDTAGIRKRAKVQEKLEKLSVADGLRAVKFAEVVVILID 293
Query: 415 AE------EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
E ++R A EGR +V+ VNK D+ +Q A K +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRLADLAEREGRAVVLAVNKWDVEGEKQ--AKLKELKE----QFTRLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ ++ W R+ T++LNRWL + H +
Sbjct: 348 KGAPLVTVSAKTGRGIDRLQEAILKAHEVWNRRITTAQLNRWLMGMTESHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV----P 579
K++Y TQVK RPP FV S L ++ R+L L+ DFD+ G PIR+ RS P
Sbjct: 408 KMRYATQVKTRPPGFVIMCSHPDMLPESYSRYLVNGLRLDFDMPGTPIRLHFRSQADKNP 467
Query: 580 RKCGSSSSRQNTGQKVGRTFSD 601
K + S+ + +G+ +D
Sbjct: 468 YKNNTKSTPSRLRKHLGKAPAD 489
>gi|227822913|ref|YP_002826885.1| GTP-binding protein EngA [Sinorhizobium fredii NGR234]
gi|254783163|sp|C3MG60.1|DER_RHISN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|227341914|gb|ACP26132.1| GTP-binding protein, essential for cell growth [Sinorhizobium
fredii NGR234]
Length = 476
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 271/477 (56%), Gaps = 38/477 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R T + + ++F+ID ++GL P D + + LR+ + IV
Sbjct: 62 QSAPD-SLQGRMWAQTEQAIDEADLSLFVIDAKAGLTPADETLAEMLRRRGKPV--IVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSVE 292
NK E+ + G ++ LG G+P ISAE G GM +L +A+ P E
Sbjct: 119 NKSEARGSD-----GGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPRE 173
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D ++ + + P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 174 DVAETDVDIRPAGAGGGEDEESEPAYDKTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V +E++GRT+ + DTAG ++ K ++ LSV + + + A V +
Sbjct: 233 GPEAGITRDSISVEWEWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVVI 292
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+ DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 293 IFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVEDWQ--AVLADLRE----KTERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 347 PQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVSG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ +R+L L+ DFD+ G+PIR+ R+
Sbjct: 407 RRLKLKYMTQVKARPPGFMISCTRPEAVPESYVRYLINGLRNDFDMPGVPIRVHFRA 463
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 80 QNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNR 139
++ A D + P G ED + +P Y+K V I+GRPN GKS L NR
Sbjct: 173 EDVAETDVDIRPAGAGGGEDEESEPAYDKTKPL---------RVAIVGRPNAGKSTLINR 223
Query: 140 LIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTAN 199
+ E + P+ +TRD + K+ D+AG+ +A L++ + A+
Sbjct: 224 FL--GEDRLLTGPEAGITRDSISVEWEWRGRTIKMFDTAGMRRKAKVQEKLEKLS--VAD 279
Query: 200 VLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAG 256
L +FA + + D DL++ + + ++A NK + + + LA
Sbjct: 280 ALRAIRFAETVVIIFDATIPFEKQDLQIVDLVLREGRAA--VLAFNKWDLVEDWQAVLAD 337
Query: 257 AAAESLML-----GFGDPIAISAETGLGMTELYEAL 287
++ L G + IS TG G+ L +A+
Sbjct: 338 LREKTERLLPQARGI-RAVPISGHTGYGLDRLMQAI 372
>gi|296446239|ref|ZP_06888186.1| ribosome-associated GTPase EngA [Methylosinus trichosporium OB3b]
gi|296256276|gb|EFH03356.1| ribosome-associated GTPase EngA [Methylosinus trichosporium OB3b]
Length = 468
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 264/488 (54%), Gaps = 68/488 (13%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+L DLRF ++D+AGLE
Sbjct: 7 TLAIIGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGEARLADLRFTIIDTAGLE 64
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E S ++ R T + +FMID R G+ P D +R+ ++ ++A
Sbjct: 65 -EGASATLEGRMRAQTEAAIESADAILFMIDARVGVTPDDKYFADLVRRAGKKV--VLAA 121
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--------RPSVED 293
NK E G + ES LG GDP+ +SAE G G+ ELY+AL +P ED
Sbjct: 122 NKSEGKKGEAGLV-----ESYELGLGDPVPLSAEHGEGLGELYDALLEALPEATQPPDED 176
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ T + + D E D +K PL++A+VGRPN GKSTL+N LL EDR+L G
Sbjct: 177 -------EEATTDVEISADEDGSEADPTK-PLRIAVVGRPNAGKSTLINRLLGEDRLLTG 228
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRA 406
PEAG+TRDS+ V F ++ R + L DTAG +R EK G +L ++ +
Sbjct: 229 PEAGITRDSIGVEFRWRDREMKLFDTAGLRKRARVVDKLEKLAGADALRAVRF------S 282
Query: 407 HVVALVLDAE----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV L+LD+ A EGR +V+ + K D + + L K + +E
Sbjct: 283 EVVVLLLDSAIPFEKQDLTIADLAAREGRAVVIALGKWDAVDD-PGTRLAK-----LREE 336
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+ ++PQ+ G PVV S G G +M V++ ++ W R+ T+RLNRWL +
Sbjct: 337 AERLLPQIRGCPVVPVSGATGYGLEGLMRAVLEAHEVWNRRISTARLNRWLESAI----- 391
Query: 517 KDQSAQP-------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
D++ P KI+Y TQ KARPP F+ F + + L + +RFLT L++ F L G
Sbjct: 392 -DETPPPAVSGRRIKIRYMTQAKARPPYFILFGNQLEELPASYMRFLTNGLRKAFALPGT 450
Query: 570 PIRITQRS 577
PIRI+ RS
Sbjct: 451 PIRISVRS 458
>gi|16125900|ref|NP_420464.1| GTP-binding protein EngA [Caulobacter crescentus CB15]
gi|221234663|ref|YP_002517099.1| GTP-binding protein EngA [Caulobacter crescentus NA1000]
gi|13423060|gb|AAK23632.1| GTP-binding protein [Caulobacter crescentus CB15]
gi|220963835|gb|ACL95191.1| EngA-subfamily GTPase protein [Caulobacter crescentus NA1000]
Length = 588
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/486 (39%), Positives = 261/486 (53%), Gaps = 52/486 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL ++ A+V + P VTRD R LGDL +++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLAGKKLAIVDDQP--GVTRDRRYASGSLGDLELELIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ S+ R T + + ++F+ D R G+ LD LRK + IVA N
Sbjct: 62 DVDDSSLEARMRAQTEAAIEEADVSLFVFDSREGVTALDEVFAAILRKRDKPV--IVAAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYMLRVL 299
K E G AGA E+ LG G+PI IS E G GM ELY AL P VE
Sbjct: 120 KAE----GKAGEAGAG-EAFRLGLGEPIPISGEHGEGMAELYAALLAFEPQVE------- 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
EDD+SK P+++AI+GRPN GKSTL+N LL EDR+L GPEAG+T
Sbjct: 168 -------------AGDDEDDDSK-PIRIAIIGRPNAGKSTLVNRLLGEDRLLTGPEAGIT 213
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RDS+ V +E+ GR + LVDTAG ++ K + LS + + + A VV LV+DA
Sbjct: 214 RDSISVDWEWDGRKIRLVDTAGLRRKAKVQDKLEKLSTADTIRAITFAEVVLLVMDATHP 273
Query: 417 -EVR-------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E++ A EGR +V ++ K DL+ Q + L A + + ++PQ+ G P
Sbjct: 274 FEIQDLQIADLAEREGRAVVFVLAKWDLIED-QAAHLT-----AFREHAERMLPQLRGAP 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
VV S G+G +M VI T++ W ++ T LN WL+ M RH S + K KY
Sbjct: 328 VVALSGETGKGIGHLMPAVIKTHRDWSTKVKTRDLNDWLQMAMQRHPPPAVSGRRVKPKY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
Q KARPPTFV F S + D R+L SL+E FDL G+P+RIT +S +
Sbjct: 388 MAQTKARPPTFVLFSSRADQMPDHYRRYLINSLRESFDLPGVPLRITIKSGANPYADGEA 447
Query: 588 RQNTGQ 593
+ ++G+
Sbjct: 448 KGHSGR 453
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L + +V + G+TRD + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLAGKKLAIVDDQPGVTRDRRYASGSLGDLELELIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-VRAVEE 423
+ A + Q+ + A V V D+ E V A++E
Sbjct: 61 EDVDDSSLEARMRA-QTEAAIEEADVSLFVFDSREGVTALDE 101
>gi|323138582|ref|ZP_08073650.1| ribosome-associated GTPase EngA [Methylocystis sp. ATCC 49242]
gi|322396216|gb|EFX98749.1| ribosome-associated GTPase EngA [Methylocystis sp. ATCC 49242]
Length = 466
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/479 (37%), Positives = 262/479 (54%), Gaps = 50/479 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ IIGRPNVGKS LFNRL ++ ALV + P VTRD REG A+L DLRF ++D+AGLE
Sbjct: 4 SLAIIGRPNVGKSTLFNRLTGKKLALVDDRP--GVTRDRREGEARLADLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E S ++ R T N + +F+ID R G+ P D +R+ KP++ +
Sbjct: 62 -EGASATLEGRMRAQTENAILSADAILFVIDARVGVTPEDKYFADLVRRAG---KPVILI 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G+L G A LG GDP+ +SAE G GM+ LY+ALR ++ +
Sbjct: 118 ANKAEGKAGEAGALEGFA-----LGLGDPVPLSAEHGEGMSNLYDALREALPEETAEPEE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + + D D + PL++A+VGRPN GKSTL+N +L EDR+L GPEAG+TR
Sbjct: 173 EEADKEENLYDDEEDGSDLDVTKPLRIAVVGRPNAGKSTLINRILGEDRLLTGPEAGITR 232
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
DS+ V F ++ R + L DTAG +R K EK LS + + + + VV L++D+
Sbjct: 233 DSIGVDFVWRDRKMKLFDTAGLRKRAKVVDKLEK----LSAADALRAVRFSEVVVLLIDS 288
Query: 416 E----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
A EGR V+ + K DL+ R R +E + ++PQV
Sbjct: 289 TIPFEKQDLTIADLAAREGRAFVIALGKWDLIEDRGAKLSLLR------EEAERLLPQVR 342
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-- 523
G PVV S G+G +M ++ T+ W R+ T++LNRWL + ++S P
Sbjct: 343 GCPVVPVSGATGQGLDRLMEAIVATHAVWNRRIATAKLNRWLLSAV------EESPPPAV 396
Query: 524 -----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ K+RPP FV F + + L + RFL L++ FDL G+PIRI++++
Sbjct: 397 SGRRIKIRYMTQAKSRPPHFVIFGNQLEELPTSYERFLINGLRKTFDLPGVPIRISRKA 455
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 105 LYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGL 164
LY+ D + +D+ + ++GRPN GKS L NR++ E + P+ +TRD
Sbjct: 181 LYDDEEDGSDLDVTKPLRIAVVGRPNAGKSTLINRIL--GEDRLLTGPEAGITRDSIGVD 238
Query: 165 AKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLD 221
D + K+ D+AGL A L++ + A+ L +F+ + +ID D
Sbjct: 239 FVWRDRKMKLFDTAGLRKRAKVVDKLEKLS--AADALRAVRFSEVVVLLIDSTIPFEKQD 296
Query: 222 LEVGKWLRKHAPQIKPIVAMNKCESLHNGTG--SLAGAAAESLMLGF-GDPIA-ISAETG 277
L + + ++A+ K + + + SL AE L+ G P+ +S TG
Sbjct: 297 LTIADLAAREGRAF--VIALGKWDLIEDRGAKLSLLREEAERLLPQVRGCPVVPVSGATG 354
Query: 278 LGMTELYEAL 287
G+ L EA+
Sbjct: 355 QGLDRLMEAI 364
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAI+GRPNVGKSTL N L + LV G+TRD ++DTAG
Sbjct: 1 MSFSLAIIGRPNVGKSTLFNRLTGKKLALVDDRPGVTRDRREGEARLADLRFTIIDTAGL 60
Query: 383 LQREKEKGPASLS---VMQSRKNLMRAHVVALVLDA 415
+E A+L Q+ ++ A + V+DA
Sbjct: 61 ----EEGASATLEGRMRAQTENAILSADAILFVIDA 92
>gi|217976948|ref|YP_002361095.1| GTP-binding protein EngA [Methylocella silvestris BL2]
gi|217502324|gb|ACK49733.1| small GTP-binding protein [Methylocella silvestris BL2]
Length = 467
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/491 (37%), Positives = 269/491 (54%), Gaps = 50/491 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ +R ALV + P VTRD REG A+LGDL FK++D+AGLE
Sbjct: 3 TIAIIGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGEARLGDLVFKIIDTAGLE 60
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E + S+ R T + F+ D R GL P D +R+ KP++ +
Sbjct: 61 -EGAAASLSGRMRAQTERAIESADAVFFLFDARLGLTPDDRFFANLVRRAD---KPLILI 116
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G A E LG GDP+ +SAE G GM++LY A+R ++ +
Sbjct: 117 ANKAEGRIGEAG-----AREGYDLGLGDPVPLSAEHGDGMSDLYSAIREALPEQT----E 167
Query: 301 DSCTQNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ T+ + ++D S+L PL++AI+GRPN GKSTLLN ++ +DR+L GPE
Sbjct: 168 LPAEEEEGETRLILGEDEDGSELDPTKPLRIAIIGRPNAGKSTLLNTIIGQDRLLTGPEP 227
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
GLTRD++ + FE+ GR + + DTAG +R K E L+ + + A V L+LDA
Sbjct: 228 GLTRDTIGIDFEWGGRKIKMFDTAGLRRRAKVEDKLEKLAGHDAVRAAKFAEVAVLLLDA 287
Query: 416 ------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++ + EGR LV+ VNK DL+ R + L + +EA+ ++PQV
Sbjct: 288 TIPFEKQDLTLADLVEREGRALVIGVNKWDLIEHR-GAKLSELREEAI-----RLLPQVK 341
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-- 523
G PVV S G G +M + ++ W R+ T+RLNRWL + +QS P
Sbjct: 342 GAPVVPLSGATGDGVGKLMEAIFRVHEVWNKRISTARLNRWLAGAL------EQSPPPAV 395
Query: 524 -----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV 578
KI+Y TQ++ARPP F+ F + L + R+L L++ FDL G+PIRI++++
Sbjct: 396 SGRRIKIRYMTQLRARPPYFLLFGNQLDALPASYERYLVNGLRQAFDLPGVPIRISKKTS 455
Query: 579 PRKCGSSSSRQ 589
+RQ
Sbjct: 456 DNPYADRKARQ 466
>gi|410943700|ref|ZP_11375441.1| GTP-binding protein Der [Gluconobacter frateurii NBRC 101659]
Length = 467
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 187/477 (39%), Positives = 262/477 (54%), Gaps = 48/477 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+ALV + P VTRD +EG A + R +++D+AG
Sbjct: 10 LPIVVIAGRPNVGKSTLFNRLVGRRQALVSDEPG--VTRDRKEGEALMRGRRIRIIDTAG 67
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R + + ++ +F ID R+G+ P D WLR+ Q +P++
Sbjct: 68 LE-EAAPDTLFGRMRASSESAVSMADLVLFCIDARAGITPTDAHFANWLRR---QNRPVM 123
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E GT AA E+ LG G P+A+SAE G G+++L + D +
Sbjct: 124 LIANKAEG-KAGTD----AALEAYSLGLGTPLALSAEHGEGISDLMG----EIVDRLPHA 174
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + +++ PL LAIVGRPN GKSTLLN LL E+R++ GPEAGL
Sbjct: 175 PRQVRHRRRDEEPEEGEEQEERPAGPLHLAIVGRPNAGKSTLLNCLLGEERMITGPEAGL 234
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ V + + LVDTAG +R + + P +SV S + L A VV L LDA
Sbjct: 235 TRDSISVELFDEVGPIRLVDTAGMRKRARVEQPLERMSVSASIEALKMAEVVVLTLDATL 294
Query: 416 -------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ R +E EGR V+ +NK D + R + ++A+ I+T + QV GI
Sbjct: 295 GVHEQDLQIARLIEKEGRACVLALNKWDAVEDRVAT------RKAISDRIETSLAQVRGI 348
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
PVV SAL G G ++ V Y+ W R+ T LNRW +++ RH QP
Sbjct: 349 PVVTFSALTGAGVHRLLPAVRKAYEVWNSRVTTGELNRWFEEMLDRH-------QPPLVD 401
Query: 524 ----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVKARPPTF+ F + + L DA R+L L+E F + G+PIRI R
Sbjct: 402 GRRLKLRYMTQVKARPPTFLLFGTRAEMLPDAYKRYLVNGLRETFHMPGVPIRIQLR 458
>gi|359793530|ref|ZP_09296277.1| GTP-binding protein Der [Mesorhizobium alhagi CCNWXJ12-2]
gi|359250243|gb|EHK53763.1| GTP-binding protein Der [Mesorhizobium alhagi CCNWXJ12-2]
Length = 477
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 271/478 (56%), Gaps = 41/478 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R AKL DL F V+D+AG ET
Sbjct: 5 VAILGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRVHPAKLYDLHFDVIDTAGFET 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
A + ++ R T + + FM+D +SGL P D +R+ KP+V +
Sbjct: 63 -AAAATLQGRMRAQTEIAIREADLIFFMVDSKSGLMPDDKAFADIVRRSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ G L E+ +G G+PI ISAE G GM +L +A+ ++ + D
Sbjct: 119 NKAEARGAQGGML-----EAWEVGLGEPIPISAEHGQGMPDLRDAVIAALGEERAFGEED 173
Query: 302 SCTQNNSST----QDVTSP--ED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ + S +D+T P ED DE+K P+++A+VGRPN GKSTL+NAL++E+R+L
Sbjct: 174 TVDEIAESEALIGEDITDPDAEDIPAYDETK-PMRIAVVGRPNAGKSTLINALVEEERLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V +E++GR + L DTAG ++ K ++ +SV + + A +V
Sbjct: 233 TGPEAGITRDSISVDWEWRGRRIKLFDTAGMRRKAKIQEKLEKMSVSDGLRAIRFAEIVI 292
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q R ++ +
Sbjct: 293 IVFDATIPFEKQDLQIVDLIVREGRAPVIAFNKWDLIDNPQEMLAELR------EKTTRL 346
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV GI V SA GRG +M V+ T++ W R+ T +LNRWL ++ H +
Sbjct: 347 LPQVRGIRAVTLSAETGRGLDKLMEAVLGTHRVWNSRVSTGKLNRWLEGILAHHPPPAVA 406
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ KIKY TQ K RPP FV S + + +R+L SL+E FDL G+PIR+ R+
Sbjct: 407 GRRLKIKYITQAKTRPPGFVLSTSRPDAMPQSYIRYLVNSLREAFDLPGVPIRMVLRA 464
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ + LV G+TRD RVH + ++DTAG
Sbjct: 1 MSFKVAILGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDR-RVHPAKLYDLHFDVIDTAG 59
Query: 382 W 382
+
Sbjct: 60 F 60
>gi|395765630|ref|ZP_10446224.1| GTPase Der [Bartonella sp. DB5-6]
gi|395411184|gb|EJF77718.1| GTPase Der [Bartonella sp. DB5-6]
Length = 475
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/480 (38%), Positives = 273/480 (56%), Gaps = 44/480 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSHTKVAVDEADLILFMFDAKSGVTPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+++L +A+ ++ + L
Sbjct: 118 ANKSES-----KAAMGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIIDAIGKE--KALK 170
Query: 301 DSCTQNNSSTQDVTSPED-----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ +++ Q V+ D DESK P+++A+ GRPN GKSTL+N +L +DR
Sbjct: 171 SRIKEEHTAVQPVSVGYDVDDFEEEDSVYDESK-PIRIAVAGRPNTGKSTLINRMLGQDR 229
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
+L GPEAGLTRDS+ V +E+ GR V L DTAG ++ K ++ LSV + + + A V
Sbjct: 230 LLTGPEAGLTRDSISVDWEWNGRHVKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEV 289
Query: 409 VALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V +V DA ++++ V+ EGR ++ NK DL+ RQ + + + ++
Sbjct: 290 VVIVFDATAPFEKQDLQIVDLVIREGRVPLIAFNKWDLIENRQATLI------DLHEKCT 343
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
++PQV G+ + S G+G +M V+ + W R+ T++LNRWL V+ H
Sbjct: 344 RLLPQVRGLRAIPLSGQYGQGIDKLMENVMIMHCVWNRRISTAKLNRWLETVVTHHPPPA 403
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVK RPP FV S K + + +R+L+ L++ FD+ G+PIRI+ R+
Sbjct: 404 ISGRRLKVKYITQVKTRPPGFVISCSRPKVMPQSYVRYLSNELRDTFDMFGVPIRISLRA 463
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H V +A+
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKVAVDEAD 84
>gi|325293656|ref|YP_004279520.1| GTP-binding protein engA [Agrobacterium sp. H13-3]
gi|325061509|gb|ADY65200.1| GTP-binding protein engA [Agrobacterium sp. H13-3]
Length = 476
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 276/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVVDAKAGLTPADETLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS AG ++ LG GDP AISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGDPCAISAEHGQGMIDLRDAIVEAIGEDVAFPPE 172
Query: 300 NDSC--------TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D T+ S ++ P DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 VDEAETDIVLPRTEPGSEEEEEEEPVYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV S +++ A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADSLRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D+ ++++ V+ EGR V+ NK DL+ Q A ++E + + +
Sbjct: 292 IVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AFLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T++LNRWL +H S
Sbjct: 346 LPQARGIRAVPMSGQTGYGLDRLMQNIIDTDKIWNRRISTAKLNRWLDAQTTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+P+R+ R
Sbjct: 406 GRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPLRVHYR 462
>gi|150376651|ref|YP_001313247.1| GTP-binding protein EngA [Sinorhizobium medicae WSM419]
gi|150031198|gb|ABR63314.1| small GTP-binding protein [Sinorhizobium medicae WSM419]
Length = 477
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/479 (38%), Positives = 276/479 (57%), Gaps = 41/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+++ S+ R T + + ++F++D ++GL P D +G+ LR+ KP+V +
Sbjct: 62 -QSSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADKTLGEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ ++ E+
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 300 NDSCTQNNSSTQDVTSPED---------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
D N D+ S DE+K PL++AIVGRPN GKSTL+N L EDR+
Sbjct: 173 EDVAETNVDIRADIGSEGPGEEEIEPVYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRL 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 LTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETV 291
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ V+ EGR V+ NK DL+ Q L ++E + +
Sbjct: 292 VIVFDATIPFEKQDLQIVDLVIREGRAAVLAFNKWDLVENWQE--LLADLRE----KTER 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H
Sbjct: 346 LLPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAV 405
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIRI R+
Sbjct: 406 SGRRLKLKYMTQVKARPPGFMISCTRPEAVPESYTRYLINGLRNDFDLAGVPIRIHFRA 464
>gi|408377650|ref|ZP_11175251.1| GTP-binding protein Der [Agrobacterium albertimagni AOL15]
gi|407748641|gb|EKF60156.1| GTP-binding protein Der [Agrobacterium albertimagni AOL15]
Length = 475
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 275/473 (58%), Gaps = 38/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + ++F++D + GL P+D + + LR+ KP+V +
Sbjct: 62 -EAGADTLEGRMRAQTEMAIDEADLSLFVVDAKYGLTPVDQTLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS G ++ LG G+P+ ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----KGS-DGGFYDAYTLGLGEPVPISAEHGQGMIDLRDAIVEAIGEDRAFPEP 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL-------PLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+D + T+ E+DE PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DDEAETDVVLTEGEGEGEEDEEFEPEYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + ++ LSV + + + A V +
Sbjct: 233 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRKKARVQEKLEKLSVADTLRAVRFAETVVI 292
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 293 VFDATIPFEKQDIQIVDFVLREGRAAVLAFNKWDLVEDPQ--AVLADLRE----KTERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M ++DT W R+ T++LNRWL V +H S
Sbjct: 347 PQARGIRAVPMSGQTGYGLDKLMQNIVDTDMVWNKRISTAKLNRWLDSVTTQHPPPAVSG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY TQVKARPP F+ + L ++ +R+LT L+ DFD+ G+PIRI
Sbjct: 407 RRLKLKYMTQVKARPPAFMISCTRPDALPESYVRYLTNGLRADFDMPGVPIRI 459
>gi|190892852|ref|YP_001979394.1| GTP-binding protein EngA [Rhizobium etli CIAT 652]
gi|238692517|sp|B3PVJ6.1|DER_RHIE6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|190698131|gb|ACE92216.1| GTP-binding protein [Rhizobium etli CIAT 652]
Length = 473
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 277/488 (56%), Gaps = 40/488 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMIDLRDAIVAAIGKDRAYAKE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ +++ + +D P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DVAVTDVDIPPSESEADGED-EEPVYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRSAEN 464
Query: 581 KCGSSSSR 588
S R
Sbjct: 465 PYESKKKR 472
>gi|414341033|ref|YP_006982554.1| protein EngA [Gluconobacter oxydans H24]
gi|411026368|gb|AFV99622.1| EngA [Gluconobacter oxydans H24]
gi|453330789|dbj|GAC87116.1| GTP-binding protein EngA [Gluconobacter thailandicus NBRC 3255]
Length = 463
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 262/477 (54%), Gaps = 48/477 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+ALV + P VTRD +EG A + R +++D+AG
Sbjct: 6 LPIVVIAGRPNVGKSTLFNRLVGRRQALVSDQPG--VTRDRKEGEALMRGRRIRIIDTAG 63
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R + + ++ +F ID R+G+ P D WLR+ Q +P++
Sbjct: 64 LE-EAAPDTLFGRMRASSESAVSMADLVLFCIDARAGITPTDAHFANWLRR---QNRPVM 119
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E GT AA E+ LG G P+A+SAE G G+++L + D +
Sbjct: 120 LIANKAEG-QAGTD----AALEAYSLGLGTPLALSAEHGEGISDLMG----EIVDRLPDA 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + +++ PL LAIVGRPN GKSTLLN LL E+R++ GPEAGL
Sbjct: 171 PRQERRRRRDEGPEEAEEQEERPPGPLHLAIVGRPNAGKSTLLNCLLGEERMITGPEAGL 230
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ V + + LVDTAG +R + E+ +SV S + L A VV L +DA
Sbjct: 231 TRDSISVDLHDEHGPIRLVDTAGMRKRARVEQHLERMSVSASIEALKMAEVVVLTIDATL 290
Query: 416 -------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ R +E EGR V+ +NK D + R + ++A+ I+T + QV GI
Sbjct: 291 GVHEQDLQIARLIEKEGRACVLALNKWDAVEDRVAT------RKAISDRIETSLAQVRGI 344
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
PVV SAL G G ++ V Y+ W R+ T LNRW +++ RH QP
Sbjct: 345 PVVTFSALTGAGVHRLLPAVRKAYEIWNSRVTTGELNRWFEEMLDRH-------QPPLVD 397
Query: 524 ----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVKARPPTF+ F + + L DA R+L L+E F + G+PIRI R
Sbjct: 398 GRRLKLRYMTQVKARPPTFLLFGTRAEMLPDAYKRYLVNGLRETFHMPGVPIRIQLR 454
>gi|49473957|ref|YP_031999.1| GTP-binding protein EngA [Bartonella quintana str. Toulouse]
gi|81696063|sp|Q6G0H5.1|DER_BARQU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|49239460|emb|CAF25811.1| GTP-binding protein [Bartonella quintana str. Toulouse]
Length = 477
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 271/478 (56%), Gaps = 38/478 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ ++GRPNVGKS LFNRL+ ++ ALV + P VTRD R A+L DL F V+D+AGLE
Sbjct: 4 TIAVVGRPNVGKSTLFNRLVGQKLALVCDKPG--VTRDRRIHAAELQDLCFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMCSHTKAAINEADLILFMFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES + G E+ LG G+P ISAE GLG+++L +A+ ++ ++ +
Sbjct: 118 ANKSES-----KAAVGVEYEAWSLGLGEPCPISAEHGLGLSDLRDAIMDAIGKERVFESK 172
Query: 300 N-DSCT--QNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N + C Q+ S V E+ DESK PL++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 NAEKCVSVQSASVGDYVDDLEEKGSVCDESKQPLRIAVAGRPNTGKSTLINRMLGQDRLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 233 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 292
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ L + ++ +
Sbjct: 293 IVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLIENNSQVTLAN-----LHEKCAHL 347
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T++LNRWL ++ H
Sbjct: 348 LPQVPGLRAVPLSGQYGQGIDNLMENVMMMHRMWNRRISTAKLNRWLETIVAHHPPPAIF 407
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP FV S KT+ + LR+L+ L+ FD+ G+PIRI+ R+
Sbjct: 408 GRRLKVKYITQVKTRPPGFVISCSRPKTMPQSYLRYLSNGLRNTFDMPGVPIRISLRA 465
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +A+VGRPNVGKSTL N L+ + LV + G+TRD R+H E Q ++DTAG
Sbjct: 1 MSLTIAVVGRPNVGKSTLFNRLVGQKLALVCDKPGVTRDR-RIHAAELQDLCFDVIDTAG 59
>gi|402488976|ref|ZP_10835780.1| GTP-binding protein Der [Rhizobium sp. CCGE 510]
gi|401811923|gb|EJT04281.1| GTP-binding protein Der [Rhizobium sp. CCGE 510]
Length = 473
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 275/479 (57%), Gaps = 44/479 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ P+
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEERAYPAK 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED V + Q+ + + P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDAA--VTDVDIPQSEEGSDEDEEPAYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 229
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVV 409
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V
Sbjct: 230 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETV 288
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 289 VIVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDR 342
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V S G G +M +IDT + W R+ T++LNRWL +H
Sbjct: 343 LLPQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTAKLNRWLETQQIQHPPPAV 402
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 403 SGRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|84503431|ref|ZP_01001491.1| GTP-binding protein EngA [Oceanicola batsensis HTCC2597]
gi|84388218|gb|EAQ01170.1| GTP-binding protein EngA [Oceanicola batsensis HTCC2597]
Length = 494
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 264/482 (54%), Gaps = 45/482 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV N P VTRD+REG A+LG L+F V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDNQPG--VTRDLREGDARLGHLKFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +F+ID R G+ P D LRK + + I+A
Sbjct: 62 -EATDESLQGRMRKLTERAVGMADVCLFVIDARVGVTPADHVFADILRKRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G E+ LG G+P+ +SAE G GM EL E L P E Y R
Sbjct: 119 NKAEGRAGEAGLF-----EAYELGLGEPLRLSAEHGEGMGELIEVLDPLAEAYAAREREA 173
Query: 302 SCTQNNSSTQDVTS--------------PEDDESKLPLQLAIVGRPNVGKSTLLNALLQE 347
+ ++ T P D PLQ+A+VGRPN GKSTL+N +L E
Sbjct: 174 AARIADAGLTPETDTDVDEEPEEDESWRPSDAR---PLQVAVVGRPNAGKSTLINRILGE 230
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
+R+L GPEAG+TRDS+ + +++G V L DTAG +R K + LSV + + A
Sbjct: 231 ERLLTGPEAGITRDSISLRLDWEGLPVRLFDTAGMRKRAKVQDKLEKLSVSDGLRAVKFA 290
Query: 407 HVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV ++LDA +++R A EGR +VV VNK DL +Q + ++E+
Sbjct: 291 EVVVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDLEDDKQGK--LRDLRES---- 344
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+ ++PQ+ G P+V SA GRG + ++ ++ W R+ T++LNRWL ++ +H
Sbjct: 345 FERLLPQLRGAPLVTVSARTGRGLDRLRTAIVSAHETWNRRISTAKLNRWLTGMLEQHPP 404
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ +++Y TQ K RPP FV S + + D+ R+L L+ DFD+ G PIR+
Sbjct: 405 PAPGGKRIRLRYMTQAKTRPPGFVVMCSHPQDVPDSYSRYLVNGLRTDFDMPGTPIRLYM 464
Query: 576 RS 577
RS
Sbjct: 465 RS 466
>gi|430004353|emb|CCF20146.1| GTP-binding protein, essential for cell growth [Rhizobium sp.]
Length = 476
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 271/479 (56%), Gaps = 49/479 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + + +F++D + GL PLD G+ LR+ KP+V +
Sbjct: 62 -ETGPDTLEGRMRAQTEMAIQEADLTLFVVDAKMGLTPLDKTFGELLRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS G ++ LG G+P+ ISAE G GM +L +A+ ++ D R
Sbjct: 118 ANKSEA----RGS-DGGFYDAFTLGLGEPVPISAEHGQGMIDLRDAIVEAIGDE--RAF- 169
Query: 301 DSCTQNNSSTQDVTSPED--------------DESKLPLQLAIVGRPNVGKSTLLNALLQ 346
+ + + DV+ P D++K PL++AIVGRPN GKSTL+N L
Sbjct: 170 -AGENDEEAVTDVSIPAGELEGDEDEEIEPVYDDTK-PLRVAIVGRPNAGKSTLINRFLG 227
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
EDR+L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + ++ LSV + + +
Sbjct: 228 EDRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVQEKLEKLSVADALRAIRF 287
Query: 406 AHVVALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A V +V DA ++++ V+ EGR V+ NK DL+ Q V + +
Sbjct: 288 AETVVIVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVEHPQE------VLADLRE 341
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
+ + ++PQ GI V S G G +M +IDT + W R+ T++LNRWL V +H
Sbjct: 342 KTERLLPQARGIRAVPISGQTGYGLDKLMQNIIDTDKVWNKRISTAKLNRWLEGVQVQHP 401
Query: 516 WKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
S + K+KY TQVKARPP F+ + + + LR+LT L+ DF + G+PIRI
Sbjct: 402 PPAVSGRRLKLKYMTQVKARPPAFMISCTRPDAVPEHYLRYLTNGLRADFQMPGVPIRI 460
>gi|89054660|ref|YP_510111.1| GTP-binding protein EngA [Jannaschia sp. CCS1]
gi|122498632|sp|Q28QC6.1|DER_JANSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|88864209|gb|ABD55086.1| Small GTP-binding protein domain [Jannaschia sp. CCS1]
Length = 479
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 265/469 (56%), Gaps = 36/469 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-A 240
+A S+ R +T ++ +F++D R+G+ DL LRK +P+V A
Sbjct: 62 -DANDDSLEGRMRRLTERAVSMADATLFVMDARAGVTTNDLVFADILRKSG---RPVVLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E +G L ++ LG G+P+A+SAE G GM +L + LRP +E
Sbjct: 118 ANKAEGNAGQSGLL-----DAYSLGLGEPLALSAEHGEGMADLVQVLRPMIEAAASAEEA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ + +T + PLQ+A+VGRPN GKSTL+N ++ EDR+L GPEAG+TR
Sbjct: 173 ETDVDVEGEDRVITHSK------PLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITR 226
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
D++ + FE+ + + DTAG +R K ++ LSV + + A VV ++LDA
Sbjct: 227 DAIGLTFEWDDVPMRIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPF 286
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R A EGR +V+ VNK D+ +Q RV ++ ++PQ+ G P+
Sbjct: 287 ESQDLRIADLAEREGRAVVIAVNKWDVEPEKQQKLKDLRVG------LERLLPQLRGAPL 340
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V SA G+G + ++ + W R+ T+RLN+WL ++ H + K++Y
Sbjct: 341 VTVSAKTGKGLDKLHAAIMKIHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYM 400
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQ K RPP FV S + L +A R+L L++DFD+ G PIR+ RS
Sbjct: 401 TQAKTRPPGFVVMCSHPQNLPEAYSRYLVNGLRQDFDMPGTPIRLWMRS 449
>gi|163761004|ref|ZP_02168082.1| GTP-binding protein EngA [Hoeflea phototrophica DFL-43]
gi|162281785|gb|EDQ32078.1| GTP-binding protein EngA [Hoeflea phototrophica DFL-43]
Length = 499
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 267/477 (55%), Gaps = 39/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL R+ ALV +TP VTRD R G A+L DLRF ++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLAGRKLALVDDTP--GVTRDRRPGDARLVDLRFTMIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ R T + + A+F+ID ++GL P D + LRK KP+V +
Sbjct: 62 VSGPD-TLEGRMRAQTEAAIDEADGAMFLIDAKAGLTPADELLADILRKRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G L ++ LG G+P +SAE G GM +L +A+ + +
Sbjct: 118 ANKAEAKGSESGML-----DAWRLGLGEPCPVSAEHGGGMLDLRDAIVEAFGEERCFPSK 172
Query: 301 DSCTQN--------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
DS + S +D PE DE+K PL++AIVGRPN GKSTL+N L +DR+L
Sbjct: 173 DSAFADAVTNIDIPTSVDEDDEGPEYDETK-PLRVAIVGRPNAGKSTLINQFLGQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V FE++GR + L DTAG ++ + ++ LSV + + + A VV +
Sbjct: 232 GPEAGITRDSIAVDFEWKGRKIKLFDTAGLRRKARVQEKLEKLSVADALRAIRFAEVVVI 291
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V D+ ++++ V EGR V+ NK DL+ RQ R + ++
Sbjct: 292 VFDSTIPFEKQDLQIADLVVREGRAPVIAFNKWDLIDNRQEKLAELR------EMTDRLL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ+ GI V + G G +M + ++ W R+ T++LNRWL G H S
Sbjct: 346 PQIRGIRAVTVAGQTGEGLERLMENIALVHRVWNKRISTAKLNRWLDHTQGHHPPPAVSG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+KARPP F+ + + + ++ R+L SL+ DF++ G+P+R+ RS
Sbjct: 406 RRLKLKYMTQIKARPPGFMISCTRPEAVPESYTRYLINSLRADFEMPGVPLRVVYRS 462
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L LAIVGRPNVGKSTL N L LV G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLAGRKLALVDDTPGVTRDRRPGDARLVDLRFTMIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ GP +L + MRA A + +A+
Sbjct: 61 ----EVSGPDTL------EGRMRAQTEAAIDEAD 84
>gi|403530216|ref|YP_006664745.1| GTP-binding protein EngA [Bartonella quintana RM-11]
gi|403232288|gb|AFR26031.1| GTP-binding protein EngA [Bartonella quintana RM-11]
Length = 476
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 273/478 (57%), Gaps = 39/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ ++GRPNVGKS LFNRL+ ++ ALV + P VTRD R A+L DL F V+D+AGLE
Sbjct: 4 TIAVVGRPNVGKSTLFNRLVGQKLALVCDKPG--VTRDRRIHAAELQDLCFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMCSHTKAAINEADLILFMFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES + G E+ LG G+P ISAE GLG+++L +A+ ++ ++ +
Sbjct: 118 ANKSES-----KAAVGTEYEAWSLGLGEPCPISAEHGLGLSDLRDAIMDAIGKERVFESK 172
Query: 300 N-DSCT--QNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N + C Q+ S V E+ DESK PL++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 NAEKCVSVQSASVGDYVDDLEEKGSVCDESKQPLRIAVAGRPNTGKSTLINRMLGQDRLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 233 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 292
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 293 IVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLIENSQVTLV------DLHEKCAHL 346
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T++LNRWL ++ H
Sbjct: 347 LPQVPGLRAVPLSGQYGQGIDNLMENVMMMHRMWNRRISTAKLNRWLETIVAHHPPPAIF 406
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP FV S KT+ + LR+L+ L+ FD+ G+PIRI+ R+
Sbjct: 407 GRRLKVKYITQVKTRPPGFVISCSRPKTMPQSYLRYLSNGLRNTFDMPGVPIRISLRA 464
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +A+VGRPNVGKSTL N L+ + LV + G+TRD R+H E Q ++DTAG
Sbjct: 1 MSLTIAVVGRPNVGKSTLFNRLVGQKLALVCDKPGVTRDR-RIHAAELQDLCFDVIDTAG 59
>gi|163867849|ref|YP_001609053.1| GTP-binding protein EngA [Bartonella tribocorum CIP 105476]
gi|189037137|sp|A9IQH4.1|DER_BART1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|161017500|emb|CAK01058.1| GTP-binding protein [Bartonella tribocorum CIP 105476]
Length = 474
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 271/477 (56%), Gaps = 39/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+++L +A+ +V N
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIIDAVGSERAFSNN 172
Query: 301 ---DSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D Q S D+ ++ DESK P+++AI GRPN GKSTL+N++L++DR+L
Sbjct: 173 KEEDMTIQPASVGDDIEDLQEEGLIYDESK-PIRIAIAGRPNTGKSTLINSMLKQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV +
Sbjct: 232 GPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVVI 291
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ + EGR V+ NK DL+ Q + + + ++ +
Sbjct: 292 VFDATMPFEKQDLQIADLVIREGRVPVIAFNKWDLIENSQATLI------DLHEKCARFL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V S G+G +M ++ ++ W R+ T++LN+WL V+ H S
Sbjct: 346 PQVRGLRAVPLSGQYGQGIDKLMENIMMMHRVWNRRISTAKLNQWLEIVVAHHPPPAISG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP F+ S K + + LR+L L+E FD+ GIP+R++ R+
Sbjct: 406 RRLKVKYITQVKTRPPGFMISCSRPKVMPQSYLRYLVNGLRETFDMSGIPVRLSLRA 462
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + A ++ V DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKAAIDEADLILFVFDAK 93
>gi|146278196|ref|YP_001168355.1| GTP-binding protein EngA [Rhodobacter sphaeroides ATCC 17025]
gi|166225848|sp|A4WUI6.1|DER_RHOS5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145556437|gb|ABP71050.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17025]
Length = 487
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 258/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LRK + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRKKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ E+ LG G+P+ +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGDAGAI-----EAWSLGLGEPVRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + +++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVSEEEADLEADPDAHKPTVKRPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+QG + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWQGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FDRLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILKAHDIWNRRITTARLNSWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>gi|395780238|ref|ZP_10460705.1| GTPase Der [Bartonella washoensis 085-0475]
gi|395419505|gb|EJF85805.1| GTPase Der [Bartonella washoensis 085-0475]
Length = 475
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 184/478 (38%), Positives = 272/478 (56%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T++I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIVIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKAAIDEADLILFMFDAKSGIMPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDYMLR 297
NK ES S G E+ LG G+P ISAE GLG+++L +A+ S+ + +
Sbjct: 118 ANKSES-----KSATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIVGSLGKERAFESK 172
Query: 298 VLNDSCTQNNSSTQDVT---SPED---DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ ++ ++S D ED DESK PL++AI GRPN GKSTL+N +L ++R+L
Sbjct: 173 DEEEHISRQSASVDDYVHNLEEEDSVYDESK-PLRIAIAGRPNTGKSTLINRMLGQERLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E+ GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGPEAGLTRDSISVDWEWCGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLVENSQITLV------DLHEKCARL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ + S G+G +M ++ ++ W R+ T +LNRWL V+ H S
Sbjct: 346 LPQVRGLRAIPLSGQYGQGIDKLMENIMMMHRVWNRRISTGKLNRWLETVVAHHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ KIKY TQVK RPP FV + S K + + LR+L L + F++ GIPIRI+ R+
Sbjct: 406 GRRLKIKYITQVKTRPPGFVIYCSRPKVMPQSYLRYLVNGLYDTFEMLGIPIRISLRA 463
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L + IVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIVIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + A ++ + DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKAAIDEADLILFMFDAK 93
>gi|197104999|ref|YP_002130376.1| GTP-binding protein EngA [Phenylobacterium zucineum HLK1]
gi|196478419|gb|ACG77947.1| GTP-binding protein [Phenylobacterium zucineum HLK1]
Length = 509
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 258/467 (55%), Gaps = 45/467 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL R+ A+V + P VTRD R G +LGDL +++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLAGRKLAIVDDRP--GVTRDRRFGTGRLGDLDLELIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ T S+ R T + + A+F+ID R G+ P D + LRK + I+A N
Sbjct: 62 DVTDESLEARMRAQTERAVDECDVALFVIDSREGVTPADRIFAEILRKRDKPV--ILAAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E G L ++ LG G+P+ ISAE G GM +LY AL +
Sbjct: 120 KAEGRQGEAGIL-----DAWGLGLGEPVPISAEHGEGMADLYAAL--------------A 160
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
++ E D+ P+++AIVGRPN GKSTL+N L+ EDR+L GPEAG+TRD+
Sbjct: 161 AVWAEDEDEEEAEDESDK---PVRIAIVGRPNAGKSTLVNRLIGEDRLLTGPEAGITRDA 217
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---EV 418
+ V +E++GR + LVDTAG ++ K ++ LS + + + A VV LV+DA E+
Sbjct: 218 IPVDWEWEGRPIRLVDTAGLRRKAKVQEKLEKLSTQDTIRAITFAEVVLLVMDATHPFEI 277
Query: 419 RAVE-------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVF 471
+ ++ EGRGLV ++ K DL+ Q V + +E ++PQV G P+V
Sbjct: 278 QDLQIADLCEREGRGLVFVLTKWDLVEEPQA------VLAEITEEAYRLLPQVKGSPIVA 331
Query: 472 TSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQ 530
SA GRG +M V+ + W ++ T LN WLR + RH + + K KY Q
Sbjct: 332 LSAETGRGMDRLMPAVLKVHGDWSTKVKTRDLNDWLRMAVERHPPPAVNGRRVKPKYMAQ 391
Query: 531 VKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KARPPTFV F S L D R+L SL+E FDL G+PIR++ RS
Sbjct: 392 TKARPPTFVMFASRADQLPDHYRRYLVNSLRESFDLPGVPIRLSVRS 438
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L +V G+TRD + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLAGRKLAIVDDRPGVTRDRRFGTGRLGDLDLELIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
E A + Q+ + + V V+D+ E
Sbjct: 61 EDVTDESLEARMRA-QTERAVDECDVALFVIDSRE 94
>gi|365854587|ref|ZP_09394658.1| ribosome biogenesis GTPase Der [Acetobacteraceae bacterium AT-5844]
gi|363719994|gb|EHM03287.1| ribosome biogenesis GTPase Der [Acetobacteraceae bacterium AT-5844]
Length = 447
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 259/471 (54%), Gaps = 47/471 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + IIGRPNVGKS LFNRL+ R+ A+V +TP VTRD +E ++G +LD+A
Sbjct: 1 MLPRIAIIGRPNVGKSTLFNRLVGRKLAIVDDTP--GVTRDRKEYPTRIGGRDVLLLDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE EA ++ R + + +F++D ++GL P D WLR+ ++ +
Sbjct: 59 GLE-EAPPDTVAGRMRASSEAAVQAADLILFVVDAKAGLTPADRAFAAWLRRQ--KVPVL 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NK E H G AA E+ LGFGDP+AISAE G G+++L+ +
Sbjct: 116 VVANKTEGRHGGM-----AALEAYELGFGDPMAISAEHGEGISDLHSTVA---------- 160
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ +DVT E PL+LA+VGRPN GKSTLLN+LL E+R++ GPE GL
Sbjct: 161 ---AMLPEEPEEEDVTDKER-----PLRLAVVGRPNAGKSTLLNSLLSEERMITGPEPGL 212
Query: 359 TRDSVRVHF-EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F + G V +VDTAG ++ K +G +SV + L A V LVLDA
Sbjct: 213 TRDAVTSEFVDETGGRVRIVDTAGMRKKAKVVEGLEQMSVGATIGALKEAEVAVLVLDAL 272
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++R A EGR +V+ +NK D + R A +R+++ +QT + Q+ G
Sbjct: 273 LGMDEQDLRIARLAEREGRAVVIALNKWDAVEDR--VAARRRIEDT----LQTSLAQLKG 326
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKI 525
+ VV SA GRG +M V +T ++W R+PT LNRW + RH + K+
Sbjct: 327 VTVVAMSAATGRGVDKLMPAVRETVERWNKRVPTGELNRWFEGALARHQPPLADGRRIKL 386
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+Y T KARPPT V F + L + R+L S +E FD+ G+PIR+ R
Sbjct: 387 RYATMPKARPPTIVVFGPRAEDLPEDYRRYLVNSFRETFDMPGVPIRLQAR 437
>gi|414166505|ref|ZP_11422738.1| GTPase Der [Afipia clevelandensis ATCC 49720]
gi|410894640|gb|EKS42428.1| GTPase Der [Afipia clevelandensis ATCC 49720]
Length = 465
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 181/468 (38%), Positives = 264/468 (56%), Gaps = 33/468 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG KLGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGAGKLGDLEFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ID R GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTEAAIAAADALMFVIDARIGLTPTDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDP+ ISAE G G+++LY+AL + + +
Sbjct: 118 ANKSEGKHGEAGAM-----ESYALGLGDPVPISAEHGEGLSDLYDALAALMPEPVETD-- 170
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ S ++V ++ S P+++A++GRPN GKST++N LL E+R+L PEAG TR
Sbjct: 171 -DDEDDAESFENVDGEDESLSTRPIRVAVLGRPNAGKSTMINRLLGEERLLTSPEAGTTR 229
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E LSV + + + A VV L++DA
Sbjct: 230 DSIAVDVMWKGREFRVFDTAGLRRRSRIEDKLEKLSVSDALRAVRFAEVVVLMMDAQNRF 289
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ N R++E + +PQ+ G+PV
Sbjct: 290 EEQDLRLADLIEREGRAIVLAVNKWDLMERAPNQ--ISRLRE----DADHWLPQMRGVPV 343
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S + G G +M + D Y W R+ T+ LNRW + + + S + K+ Y
Sbjct: 344 VAVSGMMGEGMDRLMSAIEDAYAVWNRRISTASLNRWFEQAVQTNPPPAVSGRRLKLNYI 403
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L S++ FDL G P+RIT R
Sbjct: 404 TQSKARPPSFVVFCSRADAVPESYLRYLINSMRVAFDLPGTPMRITLR 451
>gi|384920251|ref|ZP_10020266.1| GTP-binding protein EngA [Citreicella sp. 357]
gi|384465958|gb|EIE50488.1| GTP-binding protein EngA [Citreicella sp. 357]
Length = 483
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 266/471 (56%), Gaps = 31/471 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG KLGDLRF V+D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEGKLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D + + LRK A + I+A
Sbjct: 62 -DATDDSLPGRMRRLTERGVDMADICLFLIDARAGVTPTDEILAEILRKRAKHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G+ + AG E+ LG G+P+ +SAE G GM +LY L+P + + R +
Sbjct: 119 NKAE----GSAAEAGVL-EAYGLGLGEPLRLSAEHGEGMPDLYGILQPLADQFAERAAAE 173
Query: 302 ---SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + + P+Q+A+VGRPN GKSTL+N ++ EDR+L GPEAG+
Sbjct: 174 APETDIDLSDDDDMDSPLPKITAARPMQIAVVGRPNAGKSTLINKIMGEDRLLTGPEAGI 233
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ V ++ + + DTAG ++ K ++ LSV + + A VV ++LDA
Sbjct: 234 TRDAISVRIDWDDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAI 293
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R A EGR +VV VNK D+ +Q + +KEA ++PQ+ G
Sbjct: 294 PFEQQDLRIADLAEREGRAVVVAVNKWDVEEHKQEK--LRDLKEA----FDRLLPQLRGA 347
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
P+V SA GRG + ++ ++ W R+ T +LNRWL ++ H Q + K++
Sbjct: 348 PLVTVSAKTGRGLDRLNAAIVKAWETWNRRVTTGQLNRWLEGMISSHPPPAPQGKRIKLR 407
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQ K RPP FV S + ++ R+L L+E FD+ G PIR+ R
Sbjct: 408 YMTQAKTRPPAFVVKCSHPDKMPESYSRYLVNGLRESFDMQGTPIRLYMRG 458
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ + LV + G+TRD + ++DTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGEGKLGDLRFTVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ P + + R M A + ++DA
Sbjct: 61 EDATDDSLPGRMRRLTERGVDM-ADICLFLIDA 92
>gi|451940370|ref|YP_007461008.1| GTP-binding protein [Bartonella australis Aust/NH1]
gi|451899757|gb|AGF74220.1| GTP-binding protein [Bartonella australis Aust/NH1]
Length = 472
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/479 (37%), Positives = 264/479 (55%), Gaps = 44/479 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ RR ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGRRLALVDDKPG--VTRDRRMHAAKLQDLRFDVIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
EA ++ R T + + +F++D +SG+ P DL +RK I P++ N
Sbjct: 62 EACDHTLEGRMRSQTKAAIDEADLILFVLDAKSGITPSDLNFSSLIRKSGKPIVPVI--N 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL----------RPSVE 292
K ES + AG E+ LG G+P ISAE GLG +L +A+ + +E
Sbjct: 120 KSES-----KAAAGGGYEAWSLGLGEPCLISAEHGLGFADLRDAMVHVIGGDKAFKNRIE 174
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ V S + ++ S D P+++AI GRPN GKSTL+N +L +DR+L
Sbjct: 175 EGCAAVQLTSICDDIDELEEEDSVYDKSK--PIRIAIAGRPNTGKSTLINTILGQDRLLA 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAGLTRDS+ V++E++GR + L DTAG ++ K ++ L+V + + + A VV +
Sbjct: 233 GPEAGLTRDSISVNWEWRGRRIELFDTAGLRRKSKIQEKLEKLAVADTLRAIRFAEVVVI 292
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSA--LYKRVKEAVPQEIQT 459
V DA ++++ + EGR ++ NK DL+ RQ + LY +
Sbjct: 293 VFDATAPFEKQDLQISDLVIREGRVPIIAFNKWDLIKNRQETLTDLYNKCAR-------- 344
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ+ G+ V S G+G +M + + W R+ T +LNRWL V+ H
Sbjct: 345 LLPQIRGLRAVPVSGQYGQGIDKLMENITMVHHVWNRRISTGKLNRWLETVIAHHPPPVV 404
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + KIKY TQ+K RPP F+ S K + + LR+L+ L++ FD+ G+PIR++ R+
Sbjct: 405 SGRRLKIKYMTQIKTRPPGFMISCSQSKEVPQSYLRYLSNELRDAFDIKGVPIRLSLRT 463
>gi|409438286|ref|ZP_11265373.1| GTPase involved in ribosome synthesis and maintenance [Rhizobium
mesoamericanum STM3625]
gi|408750152|emb|CCM76542.1| GTPase involved in ribosome synthesis and maintenance [Rhizobium
mesoamericanum STM3625]
Length = 474
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 272/479 (56%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEARLVDLRFTIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EAHEESLQGRMRAQTEAAIDEADLSLFVVDAKTGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGSDAGFY-DAYSLGLGEPTPISAEHGQGMLDLRDAIIAALGEERAFPPK 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED + ++ ++ DD PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAVTDVDIPQPTGEEGEEEEELAYDDTK--PLRVAIVGRPNAGKSTLINRFLGEDRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVV 409
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K EK LSV + + + A +V
Sbjct: 231 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVIEKL-EKLSVADTLRAIRFAELV 289
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA +++ V+ EGR V+ NK D++ Q A+ ++E +
Sbjct: 290 VIVFDATIPFEKQDLHIVDLVLREGRAAVLAFNKWDMIEEPQ--AVLADLRE----KTDR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V S GRG +M +IDT + W R+ T+RLNRWL + +H
Sbjct: 344 LLPQARGIRAVPISGQTGRGLDKLMQSIIDTDRVWNKRISTARLNRWLEQQQVQHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 404 SGRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRNDFDMPSVPIRIHYRS 462
>gi|349700073|ref|ZP_08901702.1| GTP-binding protein Der [Gluconacetobacter europaeus LMG 18494]
Length = 474
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 259/479 (54%), Gaps = 30/479 (6%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
F ++ LP V+I GRPNVGKS +FNRL+ RR+ALV +TP VTRD +EG A +
Sbjct: 5 FPSAPVDALPVVVIAGRPNVGKSTIFNRLVGRRQALVADTP--GVTRDRKEGQAVVRGRA 62
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+++D+AGLE EA ++ R + + +A +F ID RSGL P D WLR+
Sbjct: 63 IRIIDTAGLE-EAAPDTLYGRMRASSESAVADADLVLFCIDARSGLTPADEHFANWLRR- 120
Query: 232 APQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
Q +P++ + NK E A AA E+ LG G P+AISAE G G+ +L +
Sbjct: 121 --QGRPVLLIANKAEGRQG-----AAAAMEAFSLGLGAPLAISAEHGEGVADLMSEIADR 173
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ L + + + + ED PL+LAIVGRPN GKSTLLN LL E+R+
Sbjct: 174 LPPTDLPPVQKANRRTRREQAEGEEEEDIRPPGPLRLAIVGRPNAGKSTLLNRLLGEERM 233
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ GPE GLTRDS+ V + LVDTAG ++ + ++ +SV S + L A VV
Sbjct: 234 ITGPEPGLTRDSIAVMLHDDQGPIQLVDTAGLRRKARIDETLEKMSVSASIEALKMAEVV 293
Query: 410 ALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA + R +E EGR V+ +NK D + R + ++A+ I+T
Sbjct: 294 ILVLDATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRAAT------RQAIKDRIET 347
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ Q+ GIPVV SA+ G G ++ V Y W R+ T LNRW ++ RH
Sbjct: 348 SLAQMRGIPVVAFSAMTGAGINKLLPTVRRAYDIWNRRVATGALNRWFEMMIERHPPPLV 407
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ KARPPTF+ F + L + R+L L+E FDL G PIR+ R+
Sbjct: 408 DGRRLKLRYITQAKARPPTFIVFGTRTDQLPEDYQRYLVNGLRETFDLPGTPIRLLLRA 466
>gi|402827813|ref|ZP_10876789.1| GTP-binding protein Der [Sphingomonas sp. LH128]
gi|402258645|gb|EJU09032.1| GTP-binding protein Der [Sphingomonas sp. LH128]
Length = 459
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+L L+F+++D+A
Sbjct: 1 MLPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRFGDAELIGLKFQIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + ++ R T LA A+F++D R+GL PLD E+G WLR A + I
Sbjct: 59 GWEDDEAE-TLPGRMRKQTEAALATADVALFVVDARAGLTPLDEEIGNWLR--ASPVPVI 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G G L E+ LG GDPI +SAE G GM +L+EAL P ++
Sbjct: 116 LLANKAEG-RAGEGGLL----EAYSLGLGDPIGVSAEHGEGMADLFEALLPHLDPL---- 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q E+ PL+LAIVGRPN GKSTL+N LL EDR+L GPEAG+
Sbjct: 167 ------QPPEDEFPEEEDEEARLLAPLKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGI 220
Query: 359 TRDSVRVHFEY------QGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
TRDS+ +H+ + R V+L+DTAG +R EK ++V +R + A VV
Sbjct: 221 TRDSITIHWNWTDPKTQDTREVHLIDTAGMRKRANVVEK-LERMAVADARHAIDFAEVVV 279
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LDA + +EEGR L++ +NK D+ S L+ ++ A +
Sbjct: 280 LLLDATRGLEHQDLTIASKVLEEGRALMIAINKWDV--AEDASGLFNGIRAA----LDDG 333
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ QV G+P++ SA G+G ++ + W R+PTS LNRW +G +
Sbjct: 334 LAQVRGLPLLAVSARTGKGLDEMIAAAFSIREAWSKRVPTSALNRWFDDALGANPPPAPG 393
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ K RPP FV F + L ++ R+L ++ + +PIR+ RS
Sbjct: 394 GKRIKLRYITQAKTRPPGFVVFGTRLDLLPESYKRYLINGMRRELGFESVPIRLNLRS 451
>gi|338974137|ref|ZP_08629499.1| GTP-binding protein EngA [Bradyrhizobiaceae bacterium SG-6C]
gi|338232864|gb|EGP07992.1| GTP-binding protein EngA [Bradyrhizobiaceae bacterium SG-6C]
Length = 465
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 180/468 (38%), Positives = 264/468 (56%), Gaps = 33/468 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG KLGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGAGKLGDLEFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ID R GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTEAAIAAADALMFVIDARIGLTPTDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDP+ ISAE G G+++LY+AL + + +
Sbjct: 118 ANKSEGKHGEAGAM-----ESYALGLGDPVPISAEHGEGLSDLYDALAALMPEPVETD-- 170
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ S ++V ++ + P+++A++GRPN GKST++N LL E+R+L PEAG TR
Sbjct: 171 -DDEDDAESFENVDGEDESLTTRPIRVAVLGRPNAGKSTMINRLLGEERLLTSPEAGTTR 229
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E LSV + + + A VV L++DA
Sbjct: 230 DSIAVDVMWKGREFRVFDTAGLRRRSRIEDKLEKLSVSDALRAVRFAEVVVLMMDAQNRF 289
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ N R++E + +PQ+ G+PV
Sbjct: 290 EEQDLRLADLIEREGRAIVLAVNKWDLMERAPNQ--ISRLRE----DADHWLPQMRGVPV 343
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S + G G +M + D Y W R+ T+ LNRW + + + S + K+ Y
Sbjct: 344 VAVSGMMGEGMDRLMSAIQDAYAVWNRRISTASLNRWFEQAVQTNPPPAVSGRRLKLNYI 403
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L S++ FDL G P+RIT R
Sbjct: 404 TQSKARPPSFVVFCSRADAVPESYLRYLINSMRVAFDLPGTPMRITLR 451
>gi|114798294|ref|YP_759502.1| GTP-binding protein EngA [Hyphomonas neptunium ATCC 15444]
gi|122942672|sp|Q0C441.1|DER_HYPNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114738468|gb|ABI76593.1| GTP-binding protein EngA [Hyphomonas neptunium ATCC 15444]
Length = 510
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 61/497 (12%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
I+GRPNVGKS LFNRL+ ++ ALV + P VTRD + +L L ++D+AG +
Sbjct: 7 IVGRPNVGKSTLFNRLVGKKIALVDDQPG--VTRDRKMADGRLASLPLSLIDTAGFDN-V 63
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKC 244
S+ R T +A+ +F++D R G+ P D LRK I ++A NK
Sbjct: 64 NDDSLEARMRAQTEAAIAEADLVLFLVDARVGVTPEDETFAGLLRK--ANIPVVLAANKA 121
Query: 245 ESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV------------- 291
E G ++ LGFG+P+ +SAE G GM ELYE++R ++
Sbjct: 122 EGRAGEAGVF-----DAFRLGFGEPVGLSAEHGEGMAELYESIRNALGPEAYERALEEAE 176
Query: 292 EDYMLRVLNDSCTQ-NNSSTQDVTSPEDD-------------------ESKLPLQLAIVG 331
DY D + + +D T +DD +S P++LAIVG
Sbjct: 177 PDYERGAGEDILEKLAHIDIEDTTLSDDDLVAAIEAADIDADVAEAPVQSDRPIRLAIVG 236
Query: 332 RPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKG 390
RPN GKSTL+N LLQ DR+L GPEAG+TRDS+ V++E++GR + LVDTAG ++ K ++
Sbjct: 237 RPNAGKSTLINQLLQSDRMLTGPEAGITRDSITVNWEWEGRQIRLVDTAGLRRKNKVQER 296
Query: 391 PASLSVMQSRKNLMRAHVVALVLDAEEVR----------AVEEGRGLVVIVNKMDLLSGR 440
+S ++ ++L A +VALV+DA E A+ EGRG+V++++K D +
Sbjct: 297 LERMSTAETIRSLKYADIVALVMDAHEAMEKQDLQIADLALREGRGVVLVISKWDTVEDT 356
Query: 441 QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPT 500
+A + R ++P G PVVF S L GR +M V+ Y+ W R T
Sbjct: 357 DGAARHIR------DLANRLMPNAGGAPVVFLSGLTGRNIEKLMPAVVKVYKDWTARAKT 410
Query: 501 SRLNRWLRKVMGRHSWKD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
LNRWLR + H Q + K +Y Q+KARPPTFV S + + R+L
Sbjct: 411 GDLNRWLRHTVEHHPPPSVQGKRIKPRYMAQMKARPPTFVLIASRGDQMPEGYKRYLVNG 470
Query: 560 LKEDFDLGGIPIRITQR 576
++E FD+ G+PIR+ R
Sbjct: 471 IREAFDMHGVPIRLFVR 487
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L+ + LV + G+TRD + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLVGKKIALVDDQPGVTRDRKMADGRLASLPLSLIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ A + Q+ + A +V ++DA
Sbjct: 61 DNVNDDSLEARMRA-QTEAAIAEADLVLFLVDA 92
>gi|255262204|ref|ZP_05341546.1| ribosome-associated GTPase EngA [Thalassiobium sp. R2A62]
gi|255104539|gb|EET47213.1| ribosome-associated GTPase EngA [Thalassiobium sp. R2A62]
Length = 495
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 267/481 (55%), Gaps = 45/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGEARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R+G+ P D LR+ A ++ I+A
Sbjct: 62 -EATDESLQGRMRKLTERAVDMADVCLFMIDARAGVLPADEVFADILRRRASKV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+P+ +SAE G GM EL L P + + +
Sbjct: 119 NKGE----GKAADAGVI-EAYSLGLGEPLRLSAEHGEGMAELLSELMPISDAFA----EE 169
Query: 302 SCTQNNSSTQDVTS-----------PE--DDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ Q+ ++ ++ PE + PLQ+A+VGRPN GKSTL+N +L ED
Sbjct: 170 AARQDEEASIEIDVDVFDDEDEENIPEVRPITASKPLQIAVVGRPNAGKSTLINQILGED 229
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPAS--LSVMQSRK 401
R+L GPEAG+TRD++ + E+ G V + DTAG +R K EK S L ++ +
Sbjct: 230 RLLTGPEAGITRDAISLRTEWDGTHVRIFDTAGMRKRAKVQDKLEKLSVSDGLRAVKFAE 289
Query: 402 NLMRAHVVALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
++ V + + +++R A EGR +VV VNK D+ +Q A K ++E+
Sbjct: 290 VVVVLLDVEIPFEQQDLRIADLAEREGRAVVVAVNKWDIEGEKQ--AKLKDLRES----F 343
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ ++PQ+ G P+V SA GRG + ++ + W R+PTS LNRWL + H
Sbjct: 344 ERLLPQLRGAPLVTVSAKTGRGLDRLHDAILRAHDTWNRRVPTSALNRWLAGMTEAHPPP 403
Query: 518 DQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQVK RPP FV S L + R+L L+EDFD+ G PIR+ R
Sbjct: 404 APGGRRIKMRYATQVKTRPPGFVVMCSFPDKLPASYTRYLVNGLREDFDMPGTPIRLHMR 463
Query: 577 S 577
S
Sbjct: 464 S 464
>gi|334343712|ref|YP_004552264.1| GTP-binding protein engA [Sphingobium chlorophenolicum L-1]
gi|334100334|gb|AEG47758.1| GTP-binding protein engA [Sphingobium chlorophenolicum L-1]
Length = 456
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 263/477 (55%), Gaps = 47/477 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L + F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRREGQASLLGVDFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E ++ R T + A+F++D R+G+ PLD E+ +WLR+ P+
Sbjct: 59 GYEDEDPQ-TLPGRMRMQTQAAVENADVALFVVDARAGITPLDEEIARWLREGD---APV 114
Query: 239 VAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
V M NK E G + E+ LG GDP+ SAE G G+ +L++AL P ++
Sbjct: 115 VLMANKAEGRAGDDGVM-----EAFSLGLGDPVPFSAEHGQGLADLFQALLPYID----- 164
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ ++ E D PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG
Sbjct: 165 -------REEEEGEEGEPDEADFESAPLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAG 217
Query: 358 LTRDSVRVHFEY-----QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
+TRDS+ V +++ Q R V L+DTAG +R K + L+V + A VV L
Sbjct: 218 ITRDSIAVDWQWTSPDGQERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVL 277
Query: 412 VLD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+LD A+++R +EEGR LVV +NK D + SALY+ +K+A + +
Sbjct: 278 LLDSTRGLEAQDLRIADKVLEEGRALVVALNKWDTVE--HGSALYQGIKQA----LSDGL 331
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q+ G+P++ S G+G ++ +T W R+ T LNRW + + +
Sbjct: 332 AQIRGVPIMTVSGATGKGLDDLIRVAFETRTAWSQRVSTGILNRWFERALEANPPPAPGG 391
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 392 KRIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRS 448
>gi|300022385|ref|YP_003754996.1| ribosome-associated GTPase EngA [Hyphomicrobium denitrificans ATCC
51888]
gi|299524206|gb|ADJ22675.1| ribosome-associated GTPase EngA [Hyphomicrobium denitrificans ATCC
51888]
Length = 460
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 255/467 (54%), Gaps = 30/467 (6%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL R ALV + P +TRD R+G+ L + +++D+AGLE
Sbjct: 2 VAIVGRPNVGKSTLFNRLTGTRAALVSDLPG--LTRDRRDGVTDLFGVNLRLIDTAGLE- 58
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
EA GSI DR T + +F+ID R+G+ D + R+ KP+V +
Sbjct: 59 EARQGSIADRMRKQTEQAIEAADLVLFVIDARAGVTGADTSFARIARQSG---KPVVLVA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L ++ LG G PIAISAE G G+ +L + ++ + +
Sbjct: 116 NKAEGRKGTDGVL-----DAFSLGLGAPIAISAEHGEGIGDLATDIFAALGLKIPKTGKK 170
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++ + P+++AIVGRPN GKSTL+NALL EDR++ GPE GLTRD
Sbjct: 171 GRDDDDPAAAGDAKTRPPAPARPIRVAIVGRPNAGKSTLVNALLGEDRMITGPEPGLTRD 230
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEEV-- 418
SV Y+G+++ L DTAG ++ K A L+ + +++ A VV L++DAE
Sbjct: 231 SVASELSYKGQSILLFDTAGLRRKAKITETAEKLAASDAVRSIRFAEVVVLLIDAERPFE 290
Query: 419 --------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
R EEGR LVV +NK DL+ +Q + + +K+ V + + QV + VV
Sbjct: 291 HQDLTIGHRVTEEGRALVVAINKWDLIPEKQKA--LRELKKTVAESLA----QVPNVSVV 344
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
SA G +M +I T+ W R+PT +LNRWL + + RH+ + + KI+Y T
Sbjct: 345 AISARSESGLDQLMSAIIKTHATWNRRVPTPQLNRWLEEALSRHAPPAAAGRRIKIRYVT 404
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q RPPTFVAF L + +++LT SL+E FDL G+PIR + R
Sbjct: 405 QPSTRPPTFVAFCQRADALPKSYIKYLTNSLREAFDLPGVPIRFSLR 451
>gi|421849514|ref|ZP_16282493.1| GTP-binding protein EngA [Acetobacter pasteurianus NBRC 101655]
gi|421852903|ref|ZP_16285586.1| GTP-binding protein EngA [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371459701|dbj|GAB27696.1| GTP-binding protein EngA [Acetobacter pasteurianus NBRC 101655]
gi|371478902|dbj|GAB30789.1| GTP-binding protein EngA [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 479
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 265/474 (55%), Gaps = 39/474 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V+I GRPNVGKS LFNRL+ RR+ALV +TP VTRD +EG+A + +++D+AG
Sbjct: 19 MPVVVIAGRPNVGKSTLFNRLVGRRQALVADTP--GVTRDRKEGVALIRGRYVRLIDTAG 76
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA S+ R + + + + +F +D R+G+ P D +W+R+ Q +P++
Sbjct: 77 LE-EAAPESLFGRMRFSSESAVREADLVLFCVDARAGITPADEHFAQWIRR---QNRPVL 132
Query: 240 AM-NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ NK E G L A+A E+ LG G+P+A+SAE G G+T+L + D +
Sbjct: 133 LIANKSE------GRLGAASAMEAYALGLGEPLALSAEHGEGVTDLMW----EIADRLPA 182
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ D E +E P L++AIVGRPN GKSTL+NALL E+R++ GP
Sbjct: 183 EPEHEAEPEIEAADDFAVEEGEEPPRPTGPLRVAIVGRPNAGKSTLMNALLGEERMITGP 242
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAGLTRDS+ V + T +VDTAG ++ + ++ +SV + + L A V LVL
Sbjct: 243 EAGLTRDSIAVTLKDGDDTFEIVDTAGLRKKARIDESLEKMSVSAAIEALKMAEVAVLVL 302
Query: 414 DA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R +E EGR V+ +NK D + R + + A+ + + Q
Sbjct: 303 DATLGVHEQDLQIARLIEREGRACVLALNKWDAVQDRTAT------RNAILDRLSISLAQ 356
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQ 522
+ G+PVV SAL G ++ V D + W R+PT LNRW +++ RH Q +
Sbjct: 357 MRGVPVVTFSALTGASIHKLLPAVRDAWTVWNARVPTGALNRWFEEMLERHQPPLVQGRR 416
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVK+RPPTFV F + + L D R+L L+E FDL G+PIR+ R
Sbjct: 417 LKLRYITQVKSRPPTFVIFGTRAEQLPDDYKRYLVNGLRETFDLPGVPIRLQTR 470
>gi|83952357|ref|ZP_00961088.1| GTP-binding protein EngA [Roseovarius nubinhibens ISM]
gi|83836030|gb|EAP75328.1| GTP-binding protein EngA [Roseovarius nubinhibens ISM]
Length = 479
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 280/495 (56%), Gaps = 38/495 (7%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE +AT S+
Sbjct: 1 MGKSTLFNRLVGKRLALVDDQP--GVTRDLREGEARLGDLRFTVIDTAGLE-DATDDSLQ 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNG 250
R +T + +F+ID R+G+ P+D + LRK + + I+A NK E
Sbjct: 58 GRMRRLTERAVDMADICLFVIDARTGVTPIDEVFAEILRKRSEHV--ILAANKAEGAAAD 115
Query: 251 TGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSST 310
G + E+ LG G+PI +SAE G G+ +LY L P + Y R D+ + + T
Sbjct: 116 AGVI-----EAYGLGLGEPIRLSAEHGEGLNDLYSQLMPLADGYAERARQDAPETDVTLT 170
Query: 311 QD---VTSPEDDESKL---PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR 364
++ +P+D PLQ+A+VGRPN GKSTL+N +L E+R+L GPEAG+TRD++
Sbjct: 171 EEEAEAGAPDDPHKPTEARPLQVAVVGRPNAGKSTLINKILGEERLLTGPEAGITRDAIS 230
Query: 365 VHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA------EE 417
+ + G + + DTAG ++ K ++ LSV + + A VV ++LDA ++
Sbjct: 231 LKMNWDGVPMRVFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQD 290
Query: 418 VR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTS 473
+R A EGR +VV VNK D+ +Q + +KEA + ++PQ+ G P+V S
Sbjct: 291 LRIADLAEREGRAVVVAVNKWDIEDEKQEK--LRALKEA----FERLLPQLRGAPLVTVS 344
Query: 474 ALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVK 532
A GRG + ++ + W R+ T++LNRWL ++ +H S + K++Y TQ K
Sbjct: 345 AKTGRGLDRLHAAIVKAHDVWNRRVSTAQLNRWLTGMLEQHPPPAPSGRRIKLRYMTQAK 404
Query: 533 ARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTG 592
RPP FV S + + ++ R+L L+EDFD+ G PIR+ RS K S +++T
Sbjct: 405 TRPPGFVVMCSNTEKMPESYTRYLVNGLREDFDMPGTPIRLHMRSQSDKNPYKSKKKSTP 464
Query: 593 QK----VGRTFSDKR 603
+ +G+ +DK+
Sbjct: 465 SRLRKHLGKGPADKK 479
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 61 SSLKCNLLPEVPRGFCGVVQNEALED--THVEPEPDGVVEDHKVKPLYEKPVDFTKIDIN 118
+ L L+P + G+ + +A E T E E + D KP +P+
Sbjct: 141 NDLYSQLMP-LADGYAERARQDAPETDVTLTEEEAEAGAPDDPHKPTEARPL-------- 191
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
V ++GRPN GKS L N+++ E + P+ +TRD + +V D+A
Sbjct: 192 ---QVAVVGRPNAGKSTLINKIL--GEERLLTGPEAGITRDAISLKMNWDGVPMRVFDTA 246
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
G+ +A L++ + ++ L +FA + ++D DL + + +
Sbjct: 247 GMRKKAKVQEKLEKLS--VSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAV 304
Query: 236 KPIVAMNKCESLHNGTGSLAG--AAAESLMLGF-GDP-IAISAETGLGMTELYEAL 287
+VA+NK + L A E L+ G P + +SA+TG G+ L+ A+
Sbjct: 305 --VVAVNKWDIEDEKQEKLRALKEAFERLLPQLRGAPLVTVSAKTGRGLDRLHAAI 358
>gi|407800340|ref|ZP_11147202.1| GTP-binding protein EngA [Oceaniovalibus guishaninsula JLT2003]
gi|407057569|gb|EKE43543.1| GTP-binding protein EngA [Oceaniovalibus guishaninsula JLT2003]
Length = 492
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 284/506 (56%), Gaps = 42/506 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG+A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGVARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + + ++D R G+ P+D V + LR+ ++ I+A
Sbjct: 62 -EATDDSLPGRMRKLTERAVDMADVCLMLMDARVGVTPVDEAVAEILRRRGGRV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E + G E+ LG G+PI +SAE G G+ +L L P + D + +
Sbjct: 119 NKAEGR-----AADGGLIEAYSLGLGEPIRLSAEHGEGLNDLLSQLMP-LSDALGERAAE 172
Query: 302 SCTQNNSSTQDVTSPEDDESKLP-----LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ + +DVT +D S P LQ+A+VGRPN GKSTL+NALL EDR+LVGPEA
Sbjct: 173 IAEEAPETDRDVTDDDDAVSHAPTRARPLQVAVVGRPNAGKSTLVNALLGEDRLLVGPEA 232
Query: 357 GLTRDSVRVHFEYQGRT----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
G+TRD++ V ++ G V + DTAG ++ K ++ LSV + + A VV +
Sbjct: 233 GITRDAISVTMDWPGPDGAVPVRMFDTAGMRKKAKVQEKLERLSVADGLRAVKFAEVVVV 292
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+LDA +++R A EGR +V+ VNK D R R +E + ++
Sbjct: 293 LLDAAIPFESQDLRIADLAEREGRAVVIAVNKWDAEPDRAAKLALLR------EECERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ+ G+P+V SAL GRG + ++ ++ W R+PT+RLN+WL ++ H
Sbjct: 347 PQLRGVPLVTVSALTGRGLDRLQSAIVGAHEVWNRRVPTARLNQWLSGMVEAHPPPAPGG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV-- 578
+ K++Y TQ K RPP FV S + ++++ R+L L+ FD+ G PIR+ RS
Sbjct: 407 RRIKLRYMTQAKTRPPGFVVMCSHPEKVAESYSRYLINGLRATFDMPGTPIRLWMRSQSA 466
Query: 579 --PRKCGSSSSRQNTGQKVGRTFSDK 602
P K + S+ + +G+ +D+
Sbjct: 467 ANPYKGRTKSTPSRLRKHLGKGRADE 492
>gi|330994712|ref|ZP_08318635.1| GTPase Der [Gluconacetobacter sp. SXCC-1]
gi|329758353|gb|EGG74874.1| GTPase Der [Gluconacetobacter sp. SXCC-1]
Length = 467
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 186/482 (38%), Positives = 263/482 (54%), Gaps = 44/482 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ LP V+I GRPNVGKS +FNRL+ RR+ALV +TP VTRD +EG A + +++D
Sbjct: 1 MDALPVVVIAGRPNVGKSTIFNRLVGRRQALVADTP--GVTRDRKEGQATVRGRNIRIID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+AGLE EA ++ R + + +A +F ID RSG+ P D WLR+ Q +
Sbjct: 59 TAGLE-EAAPDTLYGRMRASSESAVAHADLVLFCIDARSGITPADQHFANWLRR---QGR 114
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPS- 290
P++ + NK E A AA E+ LG G P+AISAE G G M E+ + L P+
Sbjct: 115 PVLLIANKAEGRQG-----AAAAMEAFSLGLGAPLAISAEHGEGVADLMAEIVDRLPPTD 169
Query: 291 ---VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQE 347
V+ R+ + +DV P PL+LAIVGRPN GKSTLLN LL E
Sbjct: 170 APPVQKNTRRLRREQAEAAEGEEEDVRPPG------PLRLAIVGRPNAGKSTLLNRLLGE 223
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
+R++ GPE GLTRDS+ V + LVDTAG ++ + ++ +SV S + L A
Sbjct: 224 ERMITGPEPGLTRDSIAVMLSDDEGPIQLVDTAGLRRKARIDETLEKMSVSASIEALKMA 283
Query: 407 HVVALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
VV LVLDA + R +E EGR V+ +NK D + R ++ ++A+
Sbjct: 284 EVVILVLDATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRADT------RQAIRDR 337
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
I+ + Q+ GIPVV SAL G G ++ V Y+ W R+ T LNRW ++ RH
Sbjct: 338 IEMSLAQMRGIPVVAFSALTGAGINKLLPTVRRAYEVWNRRVATGALNRWFEMMIERHPP 397
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ K++Y TQ K+RPPTF+ F + L + R+L L+E FDL G PIR+
Sbjct: 398 PLVDGRRLKLRYITQAKSRPPTFIVFGTRTDQLPEDYQRYLVNGLRETFDLPGTPIRLLL 457
Query: 576 RS 577
R+
Sbjct: 458 RA 459
>gi|17987833|ref|NP_540467.1| GTP-binding protein EngA [Brucella melitensis bv. 1 str. 16M]
gi|225851918|ref|YP_002732151.1| GTP-binding protein EngA [Brucella melitensis ATCC 23457]
gi|256264570|ref|ZP_05467102.1| GTP-binding protein engA [Brucella melitensis bv. 2 str. 63/9]
gi|260563458|ref|ZP_05833944.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. 16M]
gi|265990512|ref|ZP_06103069.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. Rev.1]
gi|265994340|ref|ZP_06106897.1| GTP-binding protein engA [Brucella melitensis bv. 3 str. Ether]
gi|384210767|ref|YP_005599849.1| small GTP-binding protein [Brucella melitensis M5-90]
gi|384407869|ref|YP_005596490.1| GTP-binding protein EngA [Brucella melitensis M28]
gi|384444488|ref|YP_005603207.1| GTP-binding protein EngA [Brucella melitensis NI]
gi|26006723|sp|Q8YFH2.1|DER_BRUME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783140|sp|C0RH89.1|DER_BRUMB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17983561|gb|AAL52731.1| gtp-binding protein [Brucella melitensis bv. 1 str. 16M]
gi|225640283|gb|ACO00197.1| small GTP-binding protein [Brucella melitensis ATCC 23457]
gi|260153474|gb|EEW88566.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. 16M]
gi|262765453|gb|EEZ11242.1| GTP-binding protein engA [Brucella melitensis bv. 3 str. Ether]
gi|263001296|gb|EEZ13871.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. Rev.1]
gi|263094935|gb|EEZ18643.1| GTP-binding protein engA [Brucella melitensis bv. 2 str. 63/9]
gi|326408416|gb|ADZ65481.1| GTP-binding protein EngA [Brucella melitensis M28]
gi|326538130|gb|ADZ86345.1| small GTP-binding protein [Brucella melitensis M5-90]
gi|349742484|gb|AEQ08027.1| GTP-binding protein EngA [Brucella melitensis NI]
Length = 483
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|62289366|ref|YP_221159.1| GTP-binding protein EngA [Brucella abortus bv. 1 str. 9-941]
gi|82699291|ref|YP_413865.1| GTP-binding protein EngA [Brucella melitensis biovar Abortus 2308]
gi|189023620|ref|YP_001934388.1| GTP-binding protein EngA [Brucella abortus S19]
gi|237814855|ref|ZP_04593853.1| small GTP-binding protein [Brucella abortus str. 2308 A]
gi|260545880|ref|ZP_05821621.1| GTP-binding protein engA [Brucella abortus NCTC 8038]
gi|260754159|ref|ZP_05866507.1| GTP-binding protein engA [Brucella abortus bv. 6 str. 870]
gi|260757379|ref|ZP_05869727.1| GTP-binding protein engA [Brucella abortus bv. 4 str. 292]
gi|260761203|ref|ZP_05873546.1| GTP-binding protein engA [Brucella abortus bv. 2 str. 86/8/59]
gi|260883184|ref|ZP_05894798.1| GTP-binding protein engA [Brucella abortus bv. 9 str. C68]
gi|297247781|ref|ZP_06931499.1| ribosome-associated GTPase EngA [Brucella abortus bv. 5 str. B3196]
gi|376273875|ref|YP_005152453.1| ribosome-associated GTPase EngA [Brucella abortus A13334]
gi|423167460|ref|ZP_17154163.1| GTPase Der [Brucella abortus bv. 1 str. NI435a]
gi|423170164|ref|ZP_17156839.1| GTPase Der [Brucella abortus bv. 1 str. NI474]
gi|423173756|ref|ZP_17160427.1| GTPase Der [Brucella abortus bv. 1 str. NI486]
gi|423176959|ref|ZP_17163605.1| GTPase Der [Brucella abortus bv. 1 str. NI488]
gi|423179597|ref|ZP_17166238.1| GTPase Der [Brucella abortus bv. 1 str. NI010]
gi|423182727|ref|ZP_17169364.1| GTPase Der [Brucella abortus bv. 1 str. NI016]
gi|423186330|ref|ZP_17172944.1| GTPase Der [Brucella abortus bv. 1 str. NI021]
gi|423191232|ref|ZP_17177840.1| GTPase Der [Brucella abortus bv. 1 str. NI259]
gi|75505338|sp|Q57EY6.1|DER_BRUAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123546332|sp|Q2YM98.1|DER_BRUA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238691492|sp|B2S9M3.1|DER_BRUA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|62195498|gb|AAX73798.1| GTP-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82615392|emb|CAJ10361.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop):Ras GTPase
superfamily:GTP-binding protein, HSR1-related:Small
GTP-bindi [Brucella melitensis biovar Abortus 2308]
gi|189019192|gb|ACD71914.1| GTP-binding protein EngA [Brucella abortus S19]
gi|237789692|gb|EEP63902.1| small GTP-binding protein [Brucella abortus str. 2308 A]
gi|260097287|gb|EEW81162.1| GTP-binding protein engA [Brucella abortus NCTC 8038]
gi|260667697|gb|EEX54637.1| GTP-binding protein engA [Brucella abortus bv. 4 str. 292]
gi|260671635|gb|EEX58456.1| GTP-binding protein engA [Brucella abortus bv. 2 str. 86/8/59]
gi|260674267|gb|EEX61088.1| GTP-binding protein engA [Brucella abortus bv. 6 str. 870]
gi|260872712|gb|EEX79781.1| GTP-binding protein engA [Brucella abortus bv. 9 str. C68]
gi|297174950|gb|EFH34297.1| ribosome-associated GTPase EngA [Brucella abortus bv. 5 str. B3196]
gi|363401481|gb|AEW18451.1| ribosome-associated GTPase EngA [Brucella abortus A13334]
gi|374540894|gb|EHR12393.1| GTPase Der [Brucella abortus bv. 1 str. NI435a]
gi|374541502|gb|EHR12997.1| GTPase Der [Brucella abortus bv. 1 str. NI486]
gi|374542400|gb|EHR13889.1| GTPase Der [Brucella abortus bv. 1 str. NI474]
gi|374551116|gb|EHR22551.1| GTPase Der [Brucella abortus bv. 1 str. NI010]
gi|374551573|gb|EHR23007.1| GTPase Der [Brucella abortus bv. 1 str. NI016]
gi|374552709|gb|EHR24132.1| GTPase Der [Brucella abortus bv. 1 str. NI488]
gi|374553922|gb|EHR25336.1| GTPase Der [Brucella abortus bv. 1 str. NI259]
gi|374558009|gb|EHR29403.1| GTPase Der [Brucella abortus bv. 1 str. NI021]
Length = 483
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKINLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|258542805|ref|YP_003188238.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01]
gi|384042726|ref|YP_005481470.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-12]
gi|384051243|ref|YP_005478306.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-03]
gi|384054351|ref|YP_005487445.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-07]
gi|384057585|ref|YP_005490252.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-22]
gi|384060226|ref|YP_005499354.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-26]
gi|384063518|ref|YP_005484160.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-32]
gi|384119528|ref|YP_005502152.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633883|dbj|BAH99858.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01]
gi|256636942|dbj|BAI02911.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-03]
gi|256639995|dbj|BAI05957.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-07]
gi|256643051|dbj|BAI09006.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-22]
gi|256646106|dbj|BAI12054.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-26]
gi|256649159|dbj|BAI15100.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-32]
gi|256652146|dbj|BAI18080.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655203|dbj|BAI21130.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-12]
Length = 472
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 265/474 (55%), Gaps = 39/474 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V+I GRPNVGKS LFNRL+ RR+ALV +TP VTRD +EG+A + +++D+AG
Sbjct: 12 MPVVVIAGRPNVGKSTLFNRLVGRRQALVADTP--GVTRDRKEGVALIRGRYVRLIDTAG 69
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA S+ R + + + + +F +D R+G+ P D +W+R+ Q +P++
Sbjct: 70 LE-EAAPESLFGRMRFSSESAVREADLVLFCVDARAGITPADEHFAQWIRR---QNRPVL 125
Query: 240 AM-NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ NK E G L A+A E+ LG G+P+A+SAE G G+T+L + D +
Sbjct: 126 LIANKSE------GRLGAASAMEAYALGLGEPLALSAEHGEGVTDLMW----EIADRLPA 175
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ D E +E P L++AIVGRPN GKSTL+NALL E+R++ GP
Sbjct: 176 EPEHEAEPEIEAADDFAVEEGEEPPRPIGPLRVAIVGRPNAGKSTLMNALLGEERMITGP 235
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAGLTRDS+ V + T +VDTAG ++ + ++ +SV + + L A V LVL
Sbjct: 236 EAGLTRDSIAVTLKDGDDTFEIVDTAGLRKKARIDESLEKMSVSAAIEALKMAEVAVLVL 295
Query: 414 DA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R +E EGR V+ +NK D + R + + A+ + + Q
Sbjct: 296 DATLGVHEQDLQIARLIEREGRACVLALNKWDAVQDRTAT------RNAILDRLSISLAQ 349
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQ 522
+ G+PVV SAL G ++ V D + W R+PT LNRW +++ RH Q +
Sbjct: 350 MRGVPVVTFSALTGASIHKLLPAVRDAWTVWNARVPTGALNRWFEEMLERHQPPLVQGRR 409
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVK+RPPTFV F + + L D R+L L+E FDL G+PIR+ R
Sbjct: 410 LKLRYITQVKSRPPTFVIFGTRAEQLPDDYKRYLVNGLRETFDLPGVPIRLQTR 463
>gi|423711141|ref|ZP_17685461.1| GTPase Der [Bartonella washoensis Sb944nv]
gi|395415055|gb|EJF81490.1| GTPase Der [Bartonella washoensis Sb944nv]
Length = 475
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/479 (38%), Positives = 273/479 (56%), Gaps = 42/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T++I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIVIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKAAIDEADLILFMFDAKSGIMPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLA-GAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDYML 296
NK ES LA G E+ LG G+P ISAE GLG+++L +A+ S+ +
Sbjct: 118 ANKSES------KLATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIVGSLGKERAFES 171
Query: 297 RVLNDSCTQNNSSTQDVT---SPED---DESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + ++ ++S D ED DESK PL++AI GRPN GKSTL+N +L ++R+
Sbjct: 172 KDEEEHISRQSASVDDYVHNLEEEDSVYDESK-PLRIAIAGRPNTGKSTLINRMLGQERL 230
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAGLTRDS+ V +E+ GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 231 LTGPEAGLTRDSISVDWEWCGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVV 290
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ + EGR ++ NK DL+ Q + + + ++
Sbjct: 291 VIVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLVENSQITLV------DLHEKCAR 344
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQV G+ + S G+G +M ++ ++ W R+ T +LNRWL V+ H
Sbjct: 345 LLPQVRGLRAIPLSGQYGQGIDKLMENIMMMHRVWNRRISTGKLNRWLETVVAHHPPPAV 404
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + KIKY TQVK RPP FV + S K + + LR+L L + F++ GIPIRI+ R+
Sbjct: 405 SGRRLKIKYITQVKTRPPGFVIYCSRPKVMPQSYLRYLVNGLYDTFEMLGIPIRISLRA 463
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L + IVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIVIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + A ++ + DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKAAIDEADLILFMFDAK 93
>gi|77463250|ref|YP_352754.1| GTP-binding protein EngA [Rhodobacter sphaeroides 2.4.1]
gi|126462124|ref|YP_001043238.1| GTP-binding protein EngA [Rhodobacter sphaeroides ATCC 17029]
gi|221639113|ref|YP_002525375.1| GTP-binding protein EngA [Rhodobacter sphaeroides KD131]
gi|332558128|ref|ZP_08412450.1| GTP-binding protein Der [Rhodobacter sphaeroides WS8N]
gi|123592083|sp|Q3J2Y1.1|DER_RHOS4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225847|sp|A3PJF0.1|DER_RHOS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783164|sp|B9KRT2.1|DER_RHOSK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77387668|gb|ABA78853.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|126103788|gb|ABN76466.1| small GTP-binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221159894|gb|ACM00874.1| GTP-binding protein engA [Rhodobacter sphaeroides KD131]
gi|332275840|gb|EGJ21155.1| GTP-binding protein Der [Rhodobacter sphaeroides WS8N]
Length = 487
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 256/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRRKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G A E+ LG G+PI +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGD-----GGAIEAWSLGLGEPIRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVPEEEADLEADPEAHKPTVKHPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+ G + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWHGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILRAHDIWNRRITTARLNTWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>gi|429206578|ref|ZP_19197844.1| GTP-binding protein EngA [Rhodobacter sp. AKP1]
gi|428190619|gb|EKX59165.1| GTP-binding protein EngA [Rhodobacter sp. AKP1]
Length = 487
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 256/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEIFADILRRKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G A E+ LG G+PI +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGD-----GGAIEAWSLGLGEPIRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVPEEEADLEADPEAHKPTVKHPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+ G + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWHGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILRAHDIWNRRITTARLNTWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>gi|395790219|ref|ZP_10469713.1| GTPase Der [Bartonella taylorii 8TBB]
gi|395426870|gb|EJF92988.1| GTPase Der [Bartonella taylorii 8TBB]
Length = 475
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 182/478 (38%), Positives = 272/478 (56%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHKAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM DV+SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSHTKAAIDEADLILFMFDVKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--EDYMLRV 298
NK ES + G E+ LG G+P ISAE GLG+++L + + ++ E +
Sbjct: 118 ANKSES-----KAAMGGEYEAWSLGLGEPCPISAEHGLGLSDLRDVIIDAIGREKALKSR 172
Query: 299 LNDS--CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ + Q S DV E+ DESK P+++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 IKEEHIAIQPESVCDDVDDFEEEGSVYDESK-PIRIAVAGRPNTGKSTLINRMLGQDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +++ GR V L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGPEAGLTRDSISVDWKWNGRHVKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDATAPFEKQDLQIADLVIREGRVPLIAFNKWDLIENSQVTLI------DLHEKCTRL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T++LNRWL V+ H S
Sbjct: 346 LPQVRGLRAVPLSGQYGQGIDKLMENVMIMHRVWNRRISTAKLNRWLETVVTHHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+K RPP FV S K + + +R+L+ L++ FD+ G+PIRI+ R+
Sbjct: 406 GRRLKVKYITQIKTRPPGFVISCSRPKVMPQSYIRYLSNGLRDTFDMLGVPIRISLRA 463
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHKAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H A + +A+
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKAAIDEAD 84
>gi|294012485|ref|YP_003545945.1| GTP-binding protein EngA [Sphingobium japonicum UT26S]
gi|390166623|ref|ZP_10218882.1| GTP-binding protein Der [Sphingobium indicum B90A]
gi|292675815|dbj|BAI97333.1| GTP-binding protein EngA [Sphingobium japonicum UT26S]
gi|389590527|gb|EIM68516.1| GTP-binding protein Der [Sphingobium indicum B90A]
Length = 456
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 263/477 (55%), Gaps = 47/477 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L + F ++D+A
Sbjct: 1 MLPTVAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRREGQANLLGVDFTIIDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E ++ R T + A+F++D R+G+ PLD E+ +WLR+ P+
Sbjct: 59 GYEDEDPQ-TLPGRMRMQTQAAVENADVALFVVDARAGITPLDEEIARWLREGD---APV 114
Query: 239 VAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
V M NK E G + E+ LG GDP+ SAE G G+ +L++AL P ++
Sbjct: 115 VLMANKAEGKAGDDGVM-----EAFSLGLGDPVPFSAEHGQGLADLFQALLPYID----- 164
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ ++ E D PL+LAIVGRPN GKSTL+N LL E+R+L GPEAG
Sbjct: 165 -------REEEEEEEGEPDEADFESAPLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAG 217
Query: 358 LTRDSVRVHFEYQG-----RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
+TRDS+ V +++ R V L+DTAG +R K + L+V + A VV L
Sbjct: 218 ITRDSIAVDWQWTDPDGNERPVRLIDTAGMRKRAKVQDKLEKLAVSDGLNAVNFAEVVVL 277
Query: 412 VLD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+LD A+++R +EEGR LVV +NK D + SALY+ +K+A+ +
Sbjct: 278 LLDSTRGLEAQDLRIADKVIEEGRALVVALNKWDTVE--NGSALYQGIKQALSDGLA--- 332
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q+ G+P++ SA G+G ++ +T W R+ T LNRW + + +
Sbjct: 333 -QIRGVPIMTVSAATGKGLDDLIRVAFETRTAWSQRVSTGILNRWFERALEANPPPAPGG 391
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ K RPPTFV F + L ++ R+L ++++ G +P+R+T RS
Sbjct: 392 KRIKLRYITQNKTRPPTFVLFGTRLDELPESYRRYLVNGIRKELGFGAVPVRLTLRS 448
>gi|304391252|ref|ZP_07373196.1| ribosome-associated GTPase EngA [Ahrensia sp. R2A130]
gi|303296608|gb|EFL90964.1| ribosome-associated GTPase EngA [Ahrensia sp. R2A130]
Length = 478
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 264/476 (55%), Gaps = 37/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV + GRPNVGKS LFNRL+ +R ALV + P VTRD R G A++GD++F+V+D+AGLE
Sbjct: 4 TVAVAGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDRRSGNARIGDIKFEVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + +F+ID R+G+ P+D LR+ + I+
Sbjct: 62 -EADQASLEGRMRAQTEQAIIDANVTLFLIDARAGVTPMDKSFATMLRRAGKPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLN 300
NK E G E+ +GFG+P+ ISAE G GM +L AL +V ED
Sbjct: 119 NKVEGRKGDDGFY-----EAFEMGFGEPVPISAEHGEGMADLRNALVEAVGEDVAFGKNE 173
Query: 301 DSCTQNNSSTQDVTS--------PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ + ++ D+ + + ++ PL++ IVGRPN GKSTL+N +L EDR+L
Sbjct: 174 PTEDEKEEASFDLEAFEAEEDETEPEYDNTRPLKICIVGRPNAGKSTLINRMLGEDRLLT 233
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V +E+QGR++ L DTAG ++ + ++ LSV + + + A VV +
Sbjct: 234 GPEAGITRDSISVDWEWQGRSIKLFDTAGMRRKARVQEKLEKLSVHDALRAIQYAEVVVI 293
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+ DA +++ V+ EGR V+ NK DL+ +Q A K + E + + ++
Sbjct: 294 MFDATIPFEKQDLHIVDLIHREGRAPVLAFNKWDLVPDKQ--AALKELHE----KTERLL 347
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ+ G+ V S G+G +M VID + W R+ TS+LN+WL V H S
Sbjct: 348 PQLRGLRTVTLSGQSGKGLDRLMEAVIDADKTWNRRVATSKLNQWLDDVQAHHPPPAVSG 407
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + KY TQ K RPPTFVA + + L + R+L L+ F L G+P+R+ R
Sbjct: 408 RRIRFKYITQAKTRPPTFVAQCTRPEGLPASYERYLLNDLRATFKLPGVPLRLYLR 463
>gi|261213405|ref|ZP_05927686.1| GTP-binding protein engA [Brucella abortus bv. 3 str. Tulya]
gi|260915012|gb|EEX81873.1| GTP-binding protein engA [Brucella abortus bv. 3 str. Tulya]
Length = 483
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKINLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQLPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|23501279|ref|NP_697406.1| GTP-binding protein EngA [Brucella suis 1330]
gi|161618354|ref|YP_001592241.1| GTP-binding protein EngA [Brucella canis ATCC 23365]
gi|225626893|ref|ZP_03784932.1| small GTP-binding protein [Brucella ceti str. Cudo]
gi|256368832|ref|YP_003106338.1| GTP-binding protein EngA [Brucella microti CCM 4915]
gi|260567011|ref|ZP_05837481.1| GTP-binding protein engA [Brucella suis bv. 4 str. 40]
gi|261218394|ref|ZP_05932675.1| GTP-binding protein engA [Brucella ceti M13/05/1]
gi|261221596|ref|ZP_05935877.1| GTP-binding protein engA [Brucella ceti B1/94]
gi|261315376|ref|ZP_05954573.1| GTP-binding protein engA [Brucella pinnipedialis M163/99/10]
gi|261317057|ref|ZP_05956254.1| GTP-binding protein engA [Brucella pinnipedialis B2/94]
gi|261320757|ref|ZP_05959954.1| GTP-binding protein engA [Brucella ceti M644/93/1]
gi|261324511|ref|ZP_05963708.1| GTP-binding protein engA [Brucella neotomae 5K33]
gi|261754380|ref|ZP_05998089.1| GTP-binding protein engA [Brucella suis bv. 3 str. 686]
gi|261757615|ref|ZP_06001324.1| GTP-binding protein engA [Brucella sp. F5/99]
gi|265983537|ref|ZP_06096272.1| GTP-binding protein engA [Brucella sp. 83/13]
gi|265988095|ref|ZP_06100652.1| GTP-binding protein engA [Brucella pinnipedialis M292/94/1]
gi|265997559|ref|ZP_06110116.1| GTP-binding protein engA [Brucella ceti M490/95/1]
gi|294851760|ref|ZP_06792433.1| ribosome-associated GTPase EngA [Brucella sp. NVSL 07-0026]
gi|306837298|ref|ZP_07470181.1| small GTP-binding protein [Brucella sp. NF 2653]
gi|306845011|ref|ZP_07477592.1| small GTP-binding protein [Brucella inopinata BO1]
gi|340790020|ref|YP_004755484.1| GTP-binding protein EngA [Brucella pinnipedialis B2/94]
gi|376274860|ref|YP_005115299.1| small GTP-binding protein [Brucella canis HSK A52141]
gi|376280068|ref|YP_005154074.1| GTP-binding protein EngA [Brucella suis VBI22]
gi|384224062|ref|YP_005615226.1| GTP-binding protein EngA [Brucella suis 1330]
gi|37999701|sp|Q8G2E8.1|DER_BRUSU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037138|sp|A9M8F4.1|DER_BRUC2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|23347166|gb|AAN29321.1| GTP-binding protein [Brucella suis 1330]
gi|161335165|gb|ABX61470.1| small GTP-binding protein domain [Brucella canis ATCC 23365]
gi|225618550|gb|EEH15593.1| small GTP-binding protein [Brucella ceti str. Cudo]
gi|255998990|gb|ACU47389.1| GTP-binding protein EngA [Brucella microti CCM 4915]
gi|260156529|gb|EEW91609.1| GTP-binding protein engA [Brucella suis bv. 4 str. 40]
gi|260920180|gb|EEX86833.1| GTP-binding protein engA [Brucella ceti B1/94]
gi|260923483|gb|EEX90051.1| GTP-binding protein engA [Brucella ceti M13/05/1]
gi|261293447|gb|EEX96943.1| GTP-binding protein engA [Brucella ceti M644/93/1]
gi|261296280|gb|EEX99776.1| GTP-binding protein engA [Brucella pinnipedialis B2/94]
gi|261300491|gb|EEY03988.1| GTP-binding protein engA [Brucella neotomae 5K33]
gi|261304402|gb|EEY07899.1| GTP-binding protein engA [Brucella pinnipedialis M163/99/10]
gi|261737599|gb|EEY25595.1| GTP-binding protein engA [Brucella sp. F5/99]
gi|261744133|gb|EEY32059.1| GTP-binding protein engA [Brucella suis bv. 3 str. 686]
gi|262552027|gb|EEZ08017.1| GTP-binding protein engA [Brucella ceti M490/95/1]
gi|264660292|gb|EEZ30553.1| GTP-binding protein engA [Brucella pinnipedialis M292/94/1]
gi|264662129|gb|EEZ32390.1| GTP-binding protein engA [Brucella sp. 83/13]
gi|294820349|gb|EFG37348.1| ribosome-associated GTPase EngA [Brucella sp. NVSL 07-0026]
gi|306274643|gb|EFM56432.1| small GTP-binding protein [Brucella inopinata BO1]
gi|306407611|gb|EFM63807.1| small GTP-binding protein [Brucella sp. NF 2653]
gi|340558478|gb|AEK53716.1| GTP-binding protein EngA [Brucella pinnipedialis B2/94]
gi|343382242|gb|AEM17734.1| GTP-binding protein EngA [Brucella suis 1330]
gi|358257667|gb|AEU05402.1| GTP-binding protein EngA [Brucella suis VBI22]
gi|363403427|gb|AEW13722.1| small GTP-binding protein [Brucella canis HSK A52141]
Length = 483
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|261751727|ref|ZP_05995436.1| GTP-binding protein engA [Brucella suis bv. 5 str. 513]
gi|261741480|gb|EEY29406.1| GTP-binding protein engA [Brucella suis bv. 5 str. 513]
Length = 483
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVEFLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|209885506|ref|YP_002289363.1| GTP-binding protein EngA [Oligotropha carboxidovorans OM5]
gi|209873702|gb|ACI93498.1| small GTP-binding protein domain [Oligotropha carboxidovorans OM5]
Length = 469
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 266/473 (56%), Gaps = 39/473 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
I++ T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D
Sbjct: 9 IDMSFTIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGQGRLGDLDFTIID 66
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+AGL++ GS+ R T +A +F+ID R+GL P D + R+ K
Sbjct: 67 TAGLDS-GPRGSLTARMQEQTEAAIAAADALMFVIDARAGLTPNDRAFADFARRAN---K 122
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NK E H G AES LG GDPI ISAE G G+ +LY+AL+ D M
Sbjct: 123 PVLLLANKSEGRHGEVG-----IAESYALGLGDPIGISAEHGEGLGDLYDALK----DLM 173
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++D + + + P P+++A++GRPN GKSTL+N LL E+R+L PE
Sbjct: 174 PEPIHDDELDEDDAEGEEIDPSR-----PIRVAVLGRPNAGKSTLINYLLGEERLLTSPE 228
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ V E++GR + + DTAG +R + + LSV + + + A VV LV+D
Sbjct: 229 AGTTRDSIAVDVEWKGRKLRVFDTAGLRRRSRIDDKLEKLSVSDALRAVRFAEVVVLVMD 288
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++R + EGR +V+ VNK DL+ R A+ A+ + ++PQ+
Sbjct: 289 AQNRFEEQDLRLADLVEREGRAIVLAVNKWDLIE-RTPGAI-----GALRESADRLLPQL 342
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V S L G G ++ + + W R+ TS LNRW + + + S +
Sbjct: 343 RGAPLVAVSGLMGEGIDRLIAAIEMAHGTWNKRVSTSALNRWFEQAVRANPPPAVSGRRL 402
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K+ Y TQ KARPP+FV F S + + LR+LT SL+E F L G PIRIT R
Sbjct: 403 KLNYVTQTKARPPSFVVFCSRADAVPQSYLRYLTNSLREAFSLPGTPIRITLR 455
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 313 VTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGR 372
+T D + +AI+GRPNVGKSTL N L+ + LV + G+TRD E QGR
Sbjct: 1 MTRARADGIDMSFTIAIIGRPNVGKSTLFNRLVGQKLALVDDQPGVTRD----RREGQGR 56
Query: 373 ----TVYLVDTAG 381
++DTAG
Sbjct: 57 LGDLDFTIIDTAG 69
>gi|357976349|ref|ZP_09140320.1| GTP-binding protein Der [Sphingomonas sp. KC8]
Length = 461
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 261/476 (54%), Gaps = 43/476 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A L L F+++D+AG
Sbjct: 4 LPVVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDATLIGLEFRIIDTAG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E + ++ R T + A+F+ID R+G+ PLD E+ +WLR P+V
Sbjct: 62 FEDEDPN-TLPGRMRVQTQAAVDTADVALFLIDSRAGVTPLDEEIARWLRSGD---TPVV 117
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G L E+ LGFGDP+ SAE G G+ EL+EALRP VE
Sbjct: 118 MLANKAEGKAGEGGVL-----EAYALGFGDPVPFSAEHGEGLVELFEALRPFVERDEEEE 172
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+T P L+LAIVGRPN GKSTL+N +L E+R++ GPEAG+
Sbjct: 173 ETADEEIEEDEEGRLTGP--------LKLAIVGRPNAGKSTLVNRMLGEERMITGPEAGI 224
Query: 359 TRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
TRDS+ V +E+ R V L+DTAG +R + + LSV + + A VV L+
Sbjct: 225 TRDSIAVDWEWTDRDGRVRPVRLIDTAGMRKRARVQDKLEKLSVADALHAVDFAEVVVLL 284
Query: 413 LD------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD A+++R ++EGR L++ +NK D+ AL++ V+ A+ + +
Sbjct: 285 LDATLGLEAQDLRIADKVLQEGRALIIALNKWDVAD--NPPALFQGVRTALDEGLA---- 338
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ SA GRG ++ ++ W R+ T +LNRW K + ++ +
Sbjct: 339 QVKGLPLITVSAATGRGVDQLIEAAFESRDAWSRRVSTGKLNRWFEKAIEKNPPPAPGGK 398
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP F+ F + L ++ R+L ++ + G +P+R+T R+
Sbjct: 399 RIKLRYLTQAKTRPPGFILFGTRVDELPESYRRYLVNGIRRELGFGAVPVRLTMRA 454
>gi|222086678|ref|YP_002545212.1| GTP-binding protein EngA [Agrobacterium radiobacter K84]
gi|398378173|ref|ZP_10536339.1| ribosome-associated GTPase EngA [Rhizobium sp. AP16]
gi|254783132|sp|B9J7W1.1|DER_AGRRK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221724126|gb|ACM27282.1| GTP-binding protein [Agrobacterium radiobacter K84]
gi|397725386|gb|EJK85837.1| ribosome-associated GTPase EngA [Rhizobium sp. AP16]
Length = 475
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 271/479 (56%), Gaps = 41/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLIDLRFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F++D + GL +D + + LRK +P+V +
Sbjct: 62 -EADEETLEGRMRAQTELAIDEADLTLFVVDAKMGLTHVDKTLAEMLRKRG---RPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG GDP ISAE G GM +L +A+ ++ D
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGDPCPISAEHGQGMMDLRDAIVEAIGHDQAFPPR 172
Query: 300 NDSCTQNNSSTQDVTS---------PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+D N S + P DE++ PL++AIVGRPN GKSTL+N L EDR+
Sbjct: 173 DDEAETNVSIPRSAVGEDGEEIDEEPAYDETR-PLRVAIVGRPNAGKSTLINRFLGEDRL 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRDS+ V + ++GRTV + DTAG ++ + + LSV + + + A V
Sbjct: 232 LTGPEAGITRDSISVDWTWRGRTVKMFDTAGMRRKARVTEKLEKLSVADTLRAIRFAETV 291
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
++ DA ++++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 292 VIIFDATIPFEKQDLQIVDLVIREGRAAVIAFNKWDMIEDRQ--AVLADLRE----KTDR 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V + G G +M ++DT + W R+ T++LNRWL +H
Sbjct: 346 LLPQARGIRAVPIAGQTGDGLDRLMQAIVDTDKVWNKRIATAKLNRWLETQQVQHPPPAV 405
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + +L ++ +R+L L+ DF + G+PIRI R+
Sbjct: 406 SGRRIKLKYMTQVKARPPAFMISCTRSDSLPESYVRYLINGLRADFAMPGVPIRIHFRT 464
>gi|110679080|ref|YP_682087.1| GTP-binding protein EngA [Roseobacter denitrificans OCh 114]
gi|123065686|sp|Q169E2.1|DER_ROSDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|109455196|gb|ABG31401.1| GTP-binding protein [Roseobacter denitrificans OCh 114]
Length = 492
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 267/479 (55%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R +T + +FM+D R G+ P DL LRK A + ++A
Sbjct: 62 -DVTDDSLQGRMRRLTERAVDMADICLFMVDARVGITPTDLVFADILRKRAGHV--VLAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ +LY L P + Y R D
Sbjct: 119 NKAEGAAADAGVI-----EAYSLGLGEPIRLSAEHGEGLNDLYTHLMPLADAYAERAAED 173
Query: 302 SCTQNNSSTQDVTSPEDDESKL-------PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + + +D D E+ L PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 174 APETDVALDEDSG---DMEAALRMPTANKPLQVAVVGRPNAGKSTLVNQILGEDRLLTGP 230
Query: 355 EAGLTRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
EAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + + A V
Sbjct: 231 EAGITRDAISLRTDWVGPEGDVIPMRIFDTAGMRKKAKVQEKLEKLSVGDGLRAVKFAEV 290
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V ++LDA +++R A EGR +VV VNK D+ +Q A ++E+ +
Sbjct: 291 VVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEENKQ--AKLNELRES----FE 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWK 517
++PQ+ G P+V SA GRG + V+ Y+ W R+ T++LNRWL ++ H
Sbjct: 345 RLLPQLRGAPLVTVSARTGRGLDRLHKAVLRAYEVWNRRVTTAQLNRWLAGMLEAHPPPA 404
Query: 518 DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + K++Y TQ K RPP FV S + D+ R+L L+ DFD+ G PIR+ R
Sbjct: 405 PQGKRIKLRYMTQAKTRPPGFVVMCSHPDKVPDSYNRYLVNGLRLDFDMPGTPIRLWMR 463
>gi|220924493|ref|YP_002499795.1| GTP-binding protein EngA [Methylobacterium nodulans ORS 2060]
gi|219949100|gb|ACL59492.1| small GTP-binding protein [Methylobacterium nodulans ORS 2060]
Length = 447
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 269/471 (57%), Gaps = 48/471 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+PTV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD REG A+LG L F ++D+AG
Sbjct: 3 MPTVAIVGRPNVGKSTLFNRLVGRKLALVDDRP--GVTRDRREGEARLGHLLFTIIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA S S+ R T +A+ +F+ID R+GL P D + +R+ KP++
Sbjct: 61 LE-EADSESLAGRMRAQTEAAIAEADAVLFVIDARAGLLPADQPFAELVRRAD---KPVI 116
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E A E+ LG GDP+ +SAE G GM +L +AL V
Sbjct: 117 LLANKAEGGAGLA-----GAYEAFGLGLGDPVPVSAEHGEGMGQLLDAL--------AEV 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L + + + D PL++AIVGRPN GKSTL+N +L E+R+LVGPEAG+
Sbjct: 164 LPEPDEAEDEAGGD----------RPLKVAIVGRPNAGKSTLINRMLGENRLLVGPEAGI 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 214 TRDSISLDWEWRGRRIKLHDTAGMRRRARVDDKLEKLAVSDGLRAVRFAEVVVVLLDATI 273
Query: 416 ----EEVRAV----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++ V +EGR LV+ +NK DL++ L K +KE + ++PQV G
Sbjct: 274 PFEKQDLTIVDLVEQEGRALVIGLNKWDLVA--DQPGLLKELKEKAAR----LLPQVRGA 327
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
VV S L G G +M V+ ++ W R+PT+R+N+WL + + + S + KI+
Sbjct: 328 AVVPLSGLAGNGIDRLMQAVVAAFEVWNRRVPTARINQWLSEAVQANPPPAISGRRIKIR 387
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQVKARPP F F + L + R+L L++ FDL G+PIR++ R+
Sbjct: 388 YATQVKARPPHFALFGNQLNVLPKSYTRYLVNGLRDTFDLPGVPIRLSLRT 438
>gi|407777558|ref|ZP_11124827.1| GTP-binding protein Der [Nitratireductor pacificus pht-3B]
gi|407300807|gb|EKF19930.1| GTP-binding protein Der [Nitratireductor pacificus pht-3B]
Length = 475
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 178/474 (37%), Positives = 266/474 (56%), Gaps = 39/474 (8%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
IIGRPNVGKS LFNRL RR A+V +TP VTRD R A+L DLRF+V+D+AGLE+ A
Sbjct: 7 IIGRPNVGKSTLFNRLAGRRMAIVDDTP--GVTRDRRSHPARLQDLRFEVIDTAGLES-A 63
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKC 244
+ ++ R T + + A+FMID R+G+ P D LR+ + I+ NK
Sbjct: 64 AAPTLEGRMRAQTELAIDEADIAVFMIDARAGIMPDDSTFANLLRRKGKPV--ILVANKI 121
Query: 245 ESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCT 304
+ G L ++ LG G+P+A+SAE GLGM++L +A+ + + + L +
Sbjct: 122 DVNAAAAGVL-----DAWELGLGEPVAVSAEHGLGMSDLRDAIVAGLGEEV--ALAEDPE 174
Query: 305 QNNSSTQDVTSPED---------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+++ ED +S PL++A+VGRPNVGKSTL+NAL+ +DR+L GPE
Sbjct: 175 PVALPGEEIAVGEDIDPDAEQVPYDSGKPLRIAVVGRPNVGKSTLINALIGQDRMLTGPE 234
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG+TRDS+ V + ++ R + L DTAG ++ + ++ LSV + + A VV +V D
Sbjct: 235 AGITRDSISVDWLWRERKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIRFAEVVIVVFD 294
Query: 415 A------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A ++++ + EGR V+ NK DL+ RQ + R ++ + ++PQV
Sbjct: 295 ATMPFEKQDLQIADLVMREGRAPVLAFNKWDLIEDRQETLAELR------EKTERLLPQV 348
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G+ V S GRG +M V T++ W R+ T+RLNRWL +H + +
Sbjct: 349 RGLQAVPISGETGRGLDKLMEAVERTHRTWNSRVSTARLNRWLEAATAQHPPPAVAGRRL 408
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQ+KARPP FV S + + +R+L L+E F L G+PIRI R+
Sbjct: 409 KVKYITQIKARPPGFVVSCSRPDAMPQSYVRYLVNGLRETFGLFGVPIRIALRT 462
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS L N LI + L P+ +TRD + + K+ D+AG+
Sbjct: 206 IAVVGRPNVGKSTLINALIGQDRML--TGPEAGITRDSISVDWLWRERKIKLFDTAGMRR 263
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPL---DLEVGKWLRKHAPQIKPIV 239
+A L++ + A+ L +FA +I V P DL++ + + P++
Sbjct: 264 KARVQEKLEKLS--VADGLRAIRFAEVVIVVFDATMPFEKQDLQIADLVMREGR--APVL 319
Query: 240 AMNKCESLHNGTGSLAGAAAESLML-----GFGDPIAISAETGLGMTELYEAL 287
A NK + + + +LA ++ L G + IS ETG G+ +L EA+
Sbjct: 320 AFNKWDLIEDRQETLAELREKTERLLPQVRGL-QAVPISGETGRGLDKLMEAV 371
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +LAI+GRPNVGKSTL N L +V G+TRD Q ++DTAG
Sbjct: 1 MTFKLAIIGRPNVGKSTLFNRLAGRRMAIVDDTPGVTRDRRSHPARLQDLRFEVIDTAGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLM--RAHVVALVLDAEEVRAVEE----------GRGLVVI 430
E P M+++ L A + ++DA ++ G+ ++++
Sbjct: 61 ---ESAAAPTLEGRMRAQTELAIDEADIAVFMIDARAGIMPDDSTFANLLRRKGKPVILV 117
Query: 431 VNKMDL 436
NK+D+
Sbjct: 118 ANKIDV 123
>gi|337740888|ref|YP_004632616.1| GTP-binding protein EngA [Oligotropha carboxidovorans OM5]
gi|386029905|ref|YP_005950680.1| GTP-binding protein EngA [Oligotropha carboxidovorans OM4]
gi|336094973|gb|AEI02799.1| GTP-binding protein EngA [Oligotropha carboxidovorans OM4]
gi|336098552|gb|AEI06375.1| GTP-binding protein EngA [Oligotropha carboxidovorans OM5]
Length = 459
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 263/468 (56%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDQP--GVTRDRREGQGRLGDLDFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ GS+ R T +A +F+ID R+GL P D + R+ KP++ +
Sbjct: 62 S-GPRGSLTARMQEQTEAAIAAADALMFVIDARAGLTPNDRAFADFARRAN---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G AES LG GDPI ISAE G G+ +LY+AL+ D M ++
Sbjct: 118 ANKSEGRHGEVG-----IAESYALGLGDPIGISAEHGEGLGDLYDALK----DLMPEPIH 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + + + P P+++A++GRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 169 DDELDEDDAEGEEIDPSR-----PIRVAVLGRPNAGKSTLINYLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + + DTAG +R + + LSV + + + A VV LV+DA
Sbjct: 224 DSIAVDVEWKGRKLRVFDTAGLRRRSRIDDKLEKLSVSDALRAVRFAEVVVLVMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR +V+ VNK DL+ R A+ A+ + ++PQ+ G P+
Sbjct: 284 EEQDLRLADLVEREGRAIVLAVNKWDLIE-RTPGAI-----GALRESADRLLPQLRGAPL 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G ++ + + W R+ TS LNRW + + + S + K+ Y
Sbjct: 338 VAVSGLMGEGIDRLIAAIEMAHGTWNKRVSTSALNRWFEQAVRANPPPAVSGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT SL+E F L G PIRIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPQSYLRYLTNSLREAFSLPGTPIRITLR 445
>gi|424896314|ref|ZP_18319888.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180541|gb|EJC80580.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 473
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 179/476 (37%), Positives = 267/476 (56%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGEGMLDLRDAIVEAIGKDRAYAKE 172
Query: 301 DSCTQN-------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
D N + P D++K PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DVAVTNVDISEAAGEGEDEDEEPVYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +V
Sbjct: 232 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T+RLNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|329114596|ref|ZP_08243355.1| GTP-binding protein EngA [Acetobacter pomorum DM001]
gi|326696076|gb|EGE47758.1| GTP-binding protein EngA [Acetobacter pomorum DM001]
Length = 479
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 180/473 (38%), Positives = 263/473 (55%), Gaps = 37/473 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V+I GRPNVGKS LFNRL+ RR+ALV +TP VTRD +EG+A + +++D+AG
Sbjct: 19 MPVVVIAGRPNVGKSTLFNRLVGRRQALVADTP--GVTRDRKEGVALIRGRYVRLIDTAG 76
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA S+ R + + + + +F +D R+G+ P D +W+R+ Q +P++
Sbjct: 77 LE-EAAPDSLFGRMRFSSESAVREADLVLFCVDARAGITPADEHFAQWIRR---QNRPVL 132
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E GT S A E+ LG G+P+A+SAE G G+T+L + D +
Sbjct: 133 LVANKTEG-RLGTAS----AMEAYALGLGEPLALSAEHGEGVTDLMW----EIADRLPAE 183
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ D E +E P L++AIVGRPN GKSTL+NALL E+R++ GPE
Sbjct: 184 PEHKAEPEIEAEDDFAVEEGEEPPRPTGPLRVAIVGRPNAGKSTLMNALLGEERMITGPE 243
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AGLTRDS+ V T +VDTAG ++ + ++ +SV + + L A V LVLD
Sbjct: 244 AGLTRDSIAVTLRDGDDTFEIVDTAGLRKKARIDESLEKMSVSAAIEALKMAEVAVLVLD 303
Query: 415 A---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R +E EGR V+ +NK D + R + + A+ + + Q+
Sbjct: 304 ATLGVHEQDLQIARLIEREGRACVLALNKWDAVQDRVAT------RNAILDRLSISLAQM 357
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQP 523
G+PVV SAL G ++ V D + W R+PT LNRW +++ RH Q +
Sbjct: 358 RGVPVVTFSALTGASIHKLLPAVRDAWTVWNARVPTGALNRWFEEMLERHQPPLVQGRRL 417
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVK+RPPTFV F + + L D R+L L+E FDL G+PIR+ R
Sbjct: 418 KLRYITQVKSRPPTFVIFGTRAEQLPDDYKRYLVNGLRETFDLPGVPIRLQTR 470
>gi|337270131|ref|YP_004614186.1| ribosome-associated GTPase EngA [Mesorhizobium opportunistum
WSM2075]
gi|336030441|gb|AEH90092.1| ribosome-associated GTPase EngA [Mesorhizobium opportunistum
WSM2075]
Length = 476
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 270/479 (56%), Gaps = 44/479 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTP--GVTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAAASTLPGRMRAQTEIAIHEADLIFFTIDAKSGLLPDDRTFAEIVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ + ++
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIAALGEARAFGEDE 173
Query: 302 SCTQNNSSTQ-----DVTSPED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
Q ++ + D+ P+ D++K P+++A+VGRPN GKSTL+NAL+ E+R+L
Sbjct: 174 EDDQEIATGEVLIGEDIADPDAEPAYDDTK-PMRIAVVGRPNAGKSTLINALIGEERLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AHVV 409
GPEAG+TRDS+ V ++++GR + L DTAG R K + L VM + L A +V
Sbjct: 233 GPEAGITRDSISVDWDWRGRRIKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAEIV 290
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+VLDA ++++ + EGR V+ NK DL+ Q L ++E + +
Sbjct: 291 IIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDHPQE--LLAELRE----KTER 344
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V SA GRG +M V+ T++ W R+ T +LNRWL ++ H
Sbjct: 345 LLPQARGIQAVPVSAETGRGLDKLMDAVLKTHKVWNSRVSTGKLNRWLEAILAHHPPPAV 404
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ + K+KY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R+
Sbjct: 405 AGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALRT 463
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAAASTLPGRMRA-QTEIAIHEADLIFFTIDAK 93
>gi|306842332|ref|ZP_07474991.1| small GTP-binding protein [Brucella sp. BO2]
gi|306287548|gb|EFM59007.1| small GTP-binding protein [Brucella sp. BO2]
Length = 483
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R A+L DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDARLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|163842662|ref|YP_001627066.1| GTP-binding protein EngA [Brucella suis ATCC 23445]
gi|189037139|sp|B0CK66.1|DER_BRUSI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163673385|gb|ABY37496.1| small GTP-binding protein domain [Brucella suis ATCC 23445]
Length = 483
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQLIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|417859272|ref|ZP_12504328.1| GTP-binding protein EngA [Agrobacterium tumefaciens F2]
gi|338822336|gb|EGP56304.1| GTP-binding protein EngA [Agrobacterium tumefaciens F2]
Length = 476
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 275/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F++D ++GL P D + + LR+ +P+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVVDAKAGLTPADETLAEMLRRRG---RPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ GS AG ++ LG GDP AISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGDPCAISAEHGQGMIDLRDAIVEAIGEDVAFPPE 172
Query: 300 NDSCTQN--------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D + S ++ P DE+K PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 173 VDEAETDIVLPRPEPGSEEEEDEEPVYDETK-PLRVAIIGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV S +++ A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADSLRSIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D+ ++++ V+ EGR V+ NK DL+ Q A ++E + + +
Sbjct: 292 IVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AFLADLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +IDT + W R+ T++LNRWL +H S
Sbjct: 346 LPQARGIRAVPISGQTGYGLDRLMQNIIDTDKIWNRRISTAKLNRWLDSQTTQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+ R
Sbjct: 406 GRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYR 462
>gi|319408190|emb|CBI81843.1| GTP-binding protein [Bartonella schoenbuchensis R1]
Length = 469
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 271/478 (56%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV N P VTRD R A+L DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDNKP--GVTRDRRVHEARLQDLRFNVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A+ ++ R T + + +F++D +SG+ P D +RK KPIV +
Sbjct: 62 -DASDQTLEGRMFFQTKAAIKEADLILFVLDAKSGVTPSDCSFASLVRKSG---KPIVLI 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--EDYMLRV 298
NK ES G E+ LG G+P AISAE GLG ++L +A+ +V + +V
Sbjct: 118 VNKSESKMAIEGGY-----EAWSLGLGEPCAISAEHGLGFSDLRDAIVNAVGKDKAFEQV 172
Query: 299 LNDSC--TQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ C T+ S D E+ DESK P+++AI GRPN GKSTL+N++L +DR+L
Sbjct: 173 KEEECALTRCVSLDNDFDDLEERGFVYDESK-PIRIAIAGRPNTGKSTLINSMLGQDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V +E++GR L DTAG ++ K ++ LSV + + + + VV
Sbjct: 232 TGPEAGITRDSISVDWEWRGRCFKLFDTAGLRRKLKVQEKLEKLSVADTLRAIRFSEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q V + ++ +
Sbjct: 292 IVFDATMPFEKQDLQIADLVIREGRVPIIAFNKWDLIENCQE------VLADLHEKCARL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M ++ ++ W R+PT +LNRWL ++ H S
Sbjct: 346 LPQVRGLRAVPLSGQYGKGIDKLMENIMMIHRVWNRRIPTGKLNRWLETIVAHHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ KIKY TQ+K RPP F+ S + + LR+L+ L++ FD+ G+PIR+ R+
Sbjct: 406 GRRLKIKYITQIKTRPPGFMISCSRSDAMPQSYLRYLSNGLRDTFDMPGVPIRLLLRT 463
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD RVH Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDNKPGVTRDR-RVHEARLQDLRFNVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE------------VRAVEEGRGLVV 429
L+ ++ Q++ + A ++ VLDA+ VR + G+ +V+
Sbjct: 60 -LEDASDQTLEGRMFFQTKAAIKEADLILFVLDAKSGVTPSDCSFASLVR--KSGKPIVL 116
Query: 430 IVNK 433
IVNK
Sbjct: 117 IVNK 120
>gi|395787590|ref|ZP_10467188.1| GTPase Der [Bartonella birtlesii LL-WM9]
gi|395410967|gb|EJF77508.1| GTPase Der [Bartonella birtlesii LL-WM9]
Length = 475
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 273/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R KL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRRIHAGKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKVAIDQADLVLFMFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES + G E+ LG G+P ISAE GLG+T+L +A+ +V +Y L
Sbjct: 118 ANKTESR-----AAKGGEYEAWSLGLGEPCPISAEHGLGLTDLRDAIMEAVGREYALESN 172
Query: 300 NDS---CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N+ Q +S DV ++ DE K P+++AI GRPN GKSTL+N++L+++R+L
Sbjct: 173 NEEECIAVQLSSVGDDVKDFQEEGLIYDEDK-PIRIAIAGRPNTGKSTLINSILKQERLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDATAPFEKQDLQIADLVIREGRVPLIAFNKWDLIENSQVTLI------DLHEKCSRL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ + S G+G +M ++ ++ W R+ T++LN+WL + S
Sbjct: 346 LPQVRGLRAIPLSGQYGQGINKLMENIMTMHRVWNRRISTAKLNQWLETAVAYRPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+K RPP F+ S K + + LR+LT L++ F++ G+PIR++ R+
Sbjct: 406 GRRLKVKYITQIKTRPPGFMLSCSRPKVMPQSYLRYLTNGLRDTFNMLGVPIRVSLRA 463
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDMPGVTRDR-RIHAGKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + +A +V + DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKVAIDQADLVLFMFDAK 93
>gi|254418441|ref|ZP_05032165.1| GTPase, putative [Brevundimonas sp. BAL3]
gi|196184618|gb|EDX79594.1| GTPase, putative [Brevundimonas sp. BAL3]
Length = 539
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/469 (37%), Positives = 255/469 (54%), Gaps = 51/469 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ +R ALV + P VTRD R +GD+ ++D+AG E
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRRYADGNIGDMDLTLIDTAGYE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIKPIVAM 241
+ T S+ R T L + +FM+D R G+ LD + LRK H KPI+ +
Sbjct: 62 DVTDDSLEARMREQTEAALEDAELVMFMMDAREGVTSLDRIFAERLRKVH----KPIILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES +G G E+ LGFG+P+AISAE G GM +LY+A+R + ED +
Sbjct: 118 ANKSESRESG-----GGVGEAHALGFGEPVAISAEHGEGMADLYKAIRTASEDIFIE--- 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
E DE P+++A++GRPN GKSTL+N L+ +DR+L GPEAG+TR
Sbjct: 170 ----------------EIDEPDKPIRIAVIGRPNAGKSTLINRLIGDDRLLTGPEAGITR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ V + ++G+ + LVDTAG ++ + ++ LSV + + + A VV L++D ++
Sbjct: 214 DSISVDWTFEGKNIRLVDTAGMRRKARVQEKLEKLSVADTIRAITFAEVVILMMDKDDAF 273
Query: 420 AVE----------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ EGR LV + +K DL Q A ++K + +PQ+ G P
Sbjct: 274 DTQDLQLADLVEREGRALVYVASKWDLEDEPQ--ARMAKLKGMA----EDKLPQLKGSPF 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKYF 528
V S+ GRG +M V+ Y W +++ T LN WL RH + K KY
Sbjct: 328 VALSSHSGRGVERLMPAVLQAYDTWSVKVKTKDLNTWLSMATQRHPPPAVDGKRIKPKYI 387
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q KARPPTFV + +++ + R+L S++E FDL G PIR+ +S
Sbjct: 388 AQTKARPPTFVLMANRAESMPEHYKRYLVNSIRESFDLPGTPIRLNVKS 436
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L++AIVGRPNVGKSTL N L+ + LV G+TRD + L+DTAG+
Sbjct: 1 MALKVAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGNIGDMDLTLIDTAGY 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
+ A + Q+ L A +V ++DA E
Sbjct: 61 EDVTDDSLEARMR-EQTEAALEDAELVMFMMDARE 94
>gi|424918621|ref|ZP_18341985.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854797|gb|EJB07318.1| ribosome-associated GTPase EngA [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 473
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 267/476 (56%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGEGMLDLRDAIVEAIGKDRAYAKE 172
Query: 301 DSCTQN-------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
D N + P D++K PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DVAVTNVDISEAAGEGEDEDEEPLYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +V
Sbjct: 232 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T++LNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQSIIDTDKVWNKRISTAKLNRWLETQQIQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|209550425|ref|YP_002282342.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|238058977|sp|B5ZYX3.1|DER_RHILW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|209536181|gb|ACI56116.1| small GTP-binding protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 473
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 267/476 (56%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGEGMLDLRDAIVEAIGKDRAYAKE 172
Query: 301 DSCTQN-------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
D N + P D++K PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DVAVTNVDISEAAGEGEDEDEEPLYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +V
Sbjct: 232 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T++LNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTAKLNRWLETQQIQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>gi|357029960|ref|ZP_09091930.1| GTP-binding protein Der [Mesorhizobium amorphae CCNWGS0123]
gi|355533536|gb|EHH02864.1| GTP-binding protein Der [Mesorhizobium amorphae CCNWGS0123]
Length = 475
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 271/479 (56%), Gaps = 44/479 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTP--GVTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAGASTLPGRMRAQTEIAIREADLIFFTIDAKSGLLPDDRTFAEVVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLN 300
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ E+
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIAALGEERAFGEEE 173
Query: 301 DSCTQNNSST----QDVTSPED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + +S +D+T P+ D++K P+++A+VGRPN GKSTL+NAL+ E+R+L
Sbjct: 174 DDVEEVAASEVLIGEDITDPDAEPSYDDTK-PMRIAVVGRPNAGKSTLINALIGEERLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AHVV 409
GPEAG+TRDS+ V ++++GR + L DTAG R K + L VM + L A +V
Sbjct: 233 GPEAGITRDSISVDWDWRGRRLKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAEIV 290
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+VLDA ++++ + EGR V+ NK DL+ Q L ++E + +
Sbjct: 291 IIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDKPQE--LLAELRE----KTER 344
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ G+ V SA GRG +M VI T++ W R+ T +LNRWL ++ H
Sbjct: 345 LLPQARGMQAVTVSAETGRGLDKLMDAVIRTHKVWNSRVSTGKLNRWLEGILAHHPPPAV 404
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ + KIKY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R+
Sbjct: 405 AGRRLKIKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALRT 463
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAGASTLPGRMRA-QTEIAIREADLIFFTIDAK 93
>gi|295689707|ref|YP_003593400.1| ribosome-associated GTPase EngA [Caulobacter segnis ATCC 21756]
gi|295431610|gb|ADG10782.1| ribosome-associated GTPase EngA [Caulobacter segnis ATCC 21756]
Length = 588
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 257/483 (53%), Gaps = 46/483 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL ++ A+V + P VTRD R +LGDL +++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLAGKKLAIVDDQP--GVTRDRRYADGRLGDLDLQLIDTAGFED 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
A S+ R T + + ++F+ D R G+ PLD LR+ + I+A N
Sbjct: 63 VADE-SLEARMRAQTELAIEEADLSLFIYDAREGVTPLDEVFATLLRRRGKPV--IIAAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E +G E+ LG G+PI IS E G GM ELY A+ +V + M
Sbjct: 120 KAEGKAGQSG-----IGEAYKLGLGEPIPISGEHGEGMAELYAAMLAAVPEEMY------ 168
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
S +D++ P++LAIVGRPN GKSTL+N L+ E R+L GPEAG+TRDS
Sbjct: 169 ------------SGDDEDEDKPIRLAIVGRPNAGKSTLINRLIGEQRLLTGPEAGITRDS 216
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---EV 418
+ V + + + V LVDTAG ++ K ++ LS + + + A VV LV+DA E+
Sbjct: 217 ISVDWVWGDKKVRLVDTAGLRKKAKVQEKLEKLSTQDTIRAITFAEVVVLVMDATHPFEI 276
Query: 419 RAVE-------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVF 471
+ ++ EGR LV ++ K DL+ + + R + + ++PQV G PVV
Sbjct: 277 QDLQIADLTEREGRALVFVLAKWDLIEDQAGTLAAFR------EHAERMLPQVRGAPVVA 330
Query: 472 TSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQ 530
S G G +M V+ ++ W ++ T LN WL+ M RH S + K KY Q
Sbjct: 331 LSGETGSGVNKLMPAVLKIHKDWSTKVKTRDLNDWLQMAMQRHPPPAVSGRRVKPKYMAQ 390
Query: 531 VKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQN 590
KARPPTFV F S + D R+L SL+E FDL G+P+RIT +S ++ +
Sbjct: 391 TKARPPTFVLFSSRADQMPDHYRRYLINSLRESFDLPGVPLRITIKSGANPYADGEAKGH 450
Query: 591 TGQ 593
+G+
Sbjct: 451 SGR 453
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L + +V + G+TRD + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLAGKKLAIVDDQPGVTRDRRYADGRLGDLDLQLIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-VRAVEE---------GRGLVVIVN 432
E A + Q+ + A + + DA E V ++E G+ +++ N
Sbjct: 61 EDVADESLEARMRA-QTELAIEEADLSLFIYDAREGVTPLDEVFATLLRRRGKPVIIAAN 119
Query: 433 KMDLLSGR 440
K + +G+
Sbjct: 120 KAEGKAGQ 127
>gi|148559467|ref|YP_001258406.1| GTP-binding protein EngA [Brucella ovis ATCC 25840]
gi|166224311|sp|A5VNV9.1|DER_BRUO2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148370724|gb|ABQ60703.1| GTP-binding protein [Brucella ovis ATCC 25840]
Length = 483
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 270/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISA+ G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAKHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+ L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPNAMPQSYVRYFINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>gi|357031032|ref|ZP_09092976.1| GTP-binding protein EngA [Gluconobacter morbifer G707]
gi|356415726|gb|EHH69369.1| GTP-binding protein EngA [Gluconobacter morbifer G707]
Length = 465
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 256/477 (53%), Gaps = 46/477 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+A+V + P VTRD +EG A L R +++D+AG
Sbjct: 6 LPVVVIAGRPNVGKSTLFNRLVGRRQAIVSDMPG--VTRDRKEGEALLRGRRVRLIDTAG 63
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R + + + +F ID RSG+ P D +WLR+ Q +P++
Sbjct: 64 LE-EAAPDTLFGRMRASSESAVGMADLVLFCIDARSGITPADAHFAQWLRR---QNRPVL 119
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E GT AA E+ LG G P+A+SAE G G+ +L A+ + R
Sbjct: 120 LIANKAEG-QAGTN----AALEAYSLGLGTPLALSAEHGEGIADLMGAIAERLPPEERRK 174
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
E PL+LAI+GRPN GKSTLLN LL E+R++ GPEAGL
Sbjct: 175 RPKPPPPVEGEGGVEQEEERPAG--PLRLAIIGRPNAGKSTLLNCLLGEERMITGPEAGL 232
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDSV V + LVDTAG +R + E+ +SV S + L A VV LV+DA
Sbjct: 233 TRDSVSVDLHDDVGPIRLVDTAGMRKRARVEQSLERMSVSASIEALKMAEVVVLVIDATL 292
Query: 416 -------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ R +E EGR V+ +NK D + R + ++A+ ++ + QV GI
Sbjct: 293 GVHEQDLQIGRLIEREGRACVIALNKWDAVEDRNAT------RKAILDRLEISLAQVRGI 346
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
PVV SAL G G ++ V + Y+ W R+ T LNRW + RH QP
Sbjct: 347 PVVTFSALTGAGVQRLLPAVRNVYEIWNSRVTTGELNRWFEDALERH-------QPPLVD 399
Query: 524 ----KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ K+RPPTF+ F + + L D+ R+L L+E F + G+PIR+ R
Sbjct: 400 GRRLKLRYMTQAKSRPPTFILFGTRAEQLPDSYKRYLVNGLRETFHMPGVPIRLQLR 456
>gi|329850909|ref|ZP_08265754.1| ribosome-associated GTPase EngA [Asticcacaulis biprosthecum C19]
gi|328841224|gb|EGF90795.1| ribosome-associated GTPase EngA [Asticcacaulis biprosthecum C19]
Length = 556
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 178/468 (38%), Positives = 258/468 (55%), Gaps = 42/468 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL ++ A+V + P VTRD R LGD+ ++D+AG E
Sbjct: 5 IAIVGRPNVGKSTLFNRLAGKKLAIVDDQP--GVTRDRRYATGNLGDIPLLLIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+ T S+ R T L + A F++D R G+ PLD LR+ KP++ +
Sbjct: 62 DLTDDSLESRMRVQTELALDECDVAFFVVDAREGVTPLDRIFAATLRRRD---KPVIMIA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E H A A E+ +LGFG+P+ +SAE G G++ELYEA E Y + D
Sbjct: 119 NKAEG-HQA----AATAEEARVLGFGEPLHLSAEHGEGISELYEA----TEKYRQLIEGD 169
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
D T P +++AI+GRPN GKSTL+N LL E+R+L GPEAG+TRD
Sbjct: 170 FIESEGGDDDDDTKP--------IRIAIIGRPNAGKSTLINKLLGEERLLTGPEAGITRD 221
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD---AEE 417
S+ V + Y+GRT+ LVDTAG ++ + ++ LS + + + A +V L +D A E
Sbjct: 222 SISVDWLYEGRTIRLVDTAGLRRKARVQEKLEKLSTADTIRAITFAEIVVLCMDEANAFE 281
Query: 418 VRAVE-------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V+ ++ EGRGL+ ++K DL++ Q R+ E V + + +PQ+ G P+V
Sbjct: 282 VQDLQIADLVEREGRGLIYAISKWDLVAEPQ-----ARLAEIV-ETAERQLPQLRGTPLV 335
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKYFT 529
S + GRG +M V+ Y+ W ++ T LN WL + RH + K KY
Sbjct: 336 TLSGVTGRGVERLMPAVLKCYRNWSAKVKTRDLNDWLALAVQRHPPPAVDGKRIKPKYMA 395
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q K RPPTFV F + + D R+L SL+E FDL G+PIR+T ++
Sbjct: 396 QTKGRPPTFVLFAARSYAMPDQYRRYLINSLRESFDLPGVPIRLTVKA 443
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL++AIVGRPNVGKSTL N L + +V + G+TRD + L+DTAG+
Sbjct: 1 MPLKIAIVGRPNVGKSTLFNRLAGKKLAIVDDQPGVTRDRRYATGNLGDIPLLLIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
+ + + V Q+ L V V+DA E
Sbjct: 61 EDLTDDSLESRMRV-QTELALDECDVAFFVVDARE 94
>gi|359398012|ref|ZP_09191036.1| GTP-binding protein EngA [Novosphingobium pentaromativorans US6-1]
gi|357600430|gb|EHJ62125.1| GTP-binding protein EngA [Novosphingobium pentaromativorans US6-1]
Length = 476
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 263/497 (52%), Gaps = 63/497 (12%)
Query: 108 KPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKL 167
KP + K +LP V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+L
Sbjct: 8 KPSEIPKRVAIMLPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRFGDAEL 65
Query: 168 GDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKW 227
L+F+++D+AG E + ++ R T LA A+F++D R+GL PLD E+G W
Sbjct: 66 LGLKFQIVDTAGWEDDEAE-TLPGRMRKQTEASLATADVALFVVDARAGLTPLDEEIGNW 124
Query: 228 LRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 287
LR A + IV NK E G G L E+ LG GDP+AISAE G GM +L+E L
Sbjct: 125 LR--ASPVPVIVLANKAEG-RAGEGGLL----EAYSLGLGDPVAISAEHGEGMGDLFEVL 177
Query: 288 RPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQE 347
P +E D + K PL+LAIVGRPN GKSTL+N L E
Sbjct: 178 LPHLEPLQPVEEEDQEYDEEALL-----------KAPLKLAIVGRPNAGKSTLINRFLGE 226
Query: 348 DRVLVGPEAGLTRDSVRVHFEY------QGRTVYLVDTAGWLQREK--EKGPASLSVMQS 399
DR+L GPEAG+TRDS+ + + + R V L+DTAG ++ + EK ++V +
Sbjct: 227 DRLLTGPEAGITRDSIAIDWLWTDPKTGDAREVRLIDTAGMRKKARVVEK-LERMAVADA 285
Query: 400 RKNLMRAHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRV 449
R + A VV L+LDA + + +EEGR L++ +NK D+ S L+ +
Sbjct: 286 RHAIDFAEVVVLLLDATKGLEHQDLKIASKVLEEGRALMIAINKWDV--AEDASKLFNGI 343
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
+ A + + QV G+P++ SA G+G ++ + W R+PT+ LNRW
Sbjct: 344 RAA----LDDGLAQVRGVPLLAVSARTGKGLDEMIAAAFSIREAWSRRVPTAALNRWFDD 399
Query: 510 VMGRHSWKDQSAQP---------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSL 560
+ SA P K++Y TQ K RPP FV F + L ++ R+L L
Sbjct: 400 AL--------SANPPPAPGGKRIKLRYITQAKTRPPGFVLFGTRLDMLPESYRRYLINGL 451
Query: 561 KEDFDLGGIPIRITQRS 577
+ + +PIR+T RS
Sbjct: 452 RRELGFEAVPIRMTLRS 468
>gi|395766988|ref|ZP_10447526.1| GTPase Der [Bartonella doshiae NCTC 12862]
gi|395415600|gb|EJF82034.1| GTPase Der [Bartonella doshiae NCTC 12862]
Length = 476
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 266/479 (55%), Gaps = 41/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ + ALV + P VTRD R L DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGLKLALVDDKPG--VTRDRRVHAGTLQDLHFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ R T + + +FM D +SG+ DL +RK KPIV +
Sbjct: 62 EAGDHHTLEGRMRSQTKAAIDEADLILFMFDAKSGITQSDLNFASLVRKSG---KPIVLV 118
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------- 291
NK ES + AGA E+ LG G+P ISAE GLG+++L +A+ ++
Sbjct: 119 ANKSES-----KAAAGAEYEAWSLGLGEPCPISAEHGLGLSDLRDAIVAAIGEEKAFESK 173
Query: 292 -EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
E+ + VL S S ++ P DESK P+++A+ GRPN GKSTL+N +L +DR+
Sbjct: 174 SEEKHVVVLPASVGDEVSDWEE-KEPIYDESK-PIRIAVAGRPNTGKSTLINRMLGQDRL 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAGLTRDS+ V +++ GR + L DTAG ++ K ++ LSV + + + A +V
Sbjct: 232 LTGPEAGLTRDSISVDWKWNGRHIKLFDTAGLRRKSKIQERLEKLSVADTLRAIRFAEIV 291
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ + EGR ++ NK DL+ Q + + + ++
Sbjct: 292 VIVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLIENSQTTLV------DLHEKCAR 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQV G+ V S G+G +M ++ ++ W R+ T +LNRWL ++ RH
Sbjct: 346 LLPQVRGLRAVPLSGQYGKGIDKLMDNILMMHRVWNRRISTGKLNRWLEMIVARHPPPAI 405
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVK RPP FV S + + + LR+L+ L++ FD+ GIPIRI+ S
Sbjct: 406 SGRRLKVKYVTQVKTRPPGFVISCSRPQVMPQSYLRYLSNGLRDTFDMLGIPIRISLHS 464
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ LV + G+TRD RVH Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGLKLALVDDKPGVTRDR-RVHAGTLQDLHFDVIDTAG 59
>gi|15889576|ref|NP_355257.1| GTP-binding protein [Agrobacterium fabrum str. C58]
gi|26006719|sp|Q8UD28.1|DER_AGRT5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|15157462|gb|AAK88042.1| GTP-binding protein [Agrobacterium fabrum str. C58]
Length = 476
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 271/481 (56%), Gaps = 48/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLIDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F+ID ++GL P D +G+ LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS AG ++ LG G+P +SAE G GM +L +A+ ++ + M
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIGEDMA---- 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKL-------------PLQLAIVGRPNVGKSTLLNALLQE 347
+ + D+ P + PL++AI+GRPN GKSTL+N L E
Sbjct: 169 -FPPDVDEAETDIVLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGE 227
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
DR+L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K + LSV S +++ A
Sbjct: 228 DRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFA 287
Query: 407 HVVALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
V +V D+ ++++ V+ EGR V+ NK DL+ Q A ++E +
Sbjct: 288 ETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AYLADLRE----K 341
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+ ++PQ GI V S G G +M +IDT + W R+ T++LNRWL +H
Sbjct: 342 TERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPP 401
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
S + K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+
Sbjct: 402 PAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHY 461
Query: 576 R 576
R
Sbjct: 462 R 462
>gi|398829581|ref|ZP_10587778.1| ribosome-associated GTPase EngA [Phyllobacterium sp. YR531]
gi|398216508|gb|EJN03054.1| ribosome-associated GTPase EngA [Phyllobacterium sp. YR531]
Length = 491
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 57/494 (11%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F V+D+AGLE
Sbjct: 4 TLAIIGRPNVGKSTLFNRLVGRKIALVDDLP--GVTRDRRVNAAKLYDLKFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E S S+ R T + + +F++D ++G+ P D+ +R+ + I+
Sbjct: 62 -EVASDSLEGRMRAQTELAIGEADLILFIVDAKAGVTPTDVTFADLVRRSGKPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ +G +S LG G+P ISAE G G +L +A+ ++ + RV D
Sbjct: 119 NKAEARGAESGMY-----DSYQLGLGEPCPISAEHGQGFPDLRDAIVDAMGEE--RVFPD 171
Query: 302 SCTQNNSSTQDVTS--------------------------PEDDESKLPLQLAIVGRPNV 335
+++T D + P D SK PL++AIVGRPN
Sbjct: 172 EYLPADANTDDSVTVTIPAAPRGMDDLIGDDIDDPDAEEIPAYDSSK-PLRIAIVGRPNA 230
Query: 336 GKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASL 394
GKSTL+N +L EDR+L GPEAG+TRDS+ V +E+ GR + L DTAG ++ + +G L
Sbjct: 231 GKSTLVNTMLGEDRLLTGPEAGITRDSISVDWEWNGRRIKLFDTAGLRRKSRVQGKLEKL 290
Query: 395 SVMQSRKNLMRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSA 444
SV + + + A VV +VLDA ++++ + EGR ++ NK DL+ RQ
Sbjct: 291 SVGDALRAIRFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLVENRQ--- 347
Query: 445 LYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLN 504
V + ++ + ++PQV GI V S +G +M V T + W R+ T RLN
Sbjct: 348 ---MVLADLREKTERLLPQVRGIRAVPISGERNQGIDKLMAAVASTDEIWNRRISTGRLN 404
Query: 505 RWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
RWL V+ H + + KIKY TQVK RPP FV S + +R+L ++E
Sbjct: 405 RWLEGVLAHHPPPAVAGRRLKIKYITQVKTRPPGFVISCSRPDAFPTSYVRYLANGIRET 464
Query: 564 FDLGGIPIRITQRS 577
FD+ G+PIR+ R+
Sbjct: 465 FDIHGVPIRLVLRT 478
>gi|13476158|ref|NP_107728.1| GTP-binding protein EngA [Mesorhizobium loti MAFF303099]
gi|26006731|sp|Q986D9.1|DER_RHILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|14026918|dbj|BAB53514.1| GTP-binding protei [Mesorhizobium loti MAFF303099]
Length = 479
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 268/481 (55%), Gaps = 45/481 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTPG--VTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAGASTLPGRMRAQTEIAIHEADLIFFTIDAKSGLLPDDRTFAEIVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLN 300
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ E
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIAALGEARAFGEEE 173
Query: 301 DSCTQNNSSTQ-----DVTSPEDDESKL-----PLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ ++T+ D+ P+ +++ P+++A+VGRPN GKSTL+NAL+ E+R+
Sbjct: 174 EGEDDEIAATEVLIGEDIADPDAEDAHTYDNTKPMRIAVVGRPNAGKSTLINALIGEERL 233
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AH 407
L GPEAG+TRDS+ V +++ GR + L DTAG R K + L VM + L A
Sbjct: 234 LTGPEAGITRDSISVDWDWHGRRLKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAE 291
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
+V +VLDA ++++ + EGR V+ NK DL+ Q L ++E +
Sbjct: 292 IVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDHPQE--LLAELRE----KT 345
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ ++PQV GI V SA GRG +M V+ T++ W R+ T +LNRWL ++ H
Sbjct: 346 ERLLPQVRGIQAVPVSAETGRGLDKLMDAVLRTHKVWNSRVSTGKLNRWLEAILAHHPPP 405
Query: 518 DQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + K+KY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R
Sbjct: 406 AVAGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALR 465
Query: 577 S 577
+
Sbjct: 466 T 466
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAGASTLPGRMRA-QTEIAIHEADLIFFTIDAK 93
>gi|335036684|ref|ZP_08530008.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
gi|333791933|gb|EGL63306.1| GTP-binding protein [Agrobacterium sp. ATCC 31749]
Length = 476
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 271/481 (56%), Gaps = 48/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLIDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F+ID ++GL P D +G+ LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS AG ++ LG G+P +SAE G GM +L +A+ ++ + M
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIGEDMA---- 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKL-------------PLQLAIVGRPNVGKSTLLNALLQE 347
+ + D+ P + PL++AI+GRPN GKSTL+N L E
Sbjct: 169 -FPPDVDEAETDIVLPRAEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGE 227
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
DR+L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K + LSV S +++ A
Sbjct: 228 DRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFA 287
Query: 407 HVVALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
V +V D+ ++++ V+ EGR V+ NK DL+ Q A ++E +
Sbjct: 288 ETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AYLADLRE----K 341
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+ ++PQ GI V S G G +M +IDT + W R+ T++LNRWL +H
Sbjct: 342 TERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPP 401
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
S + K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+
Sbjct: 402 PAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHY 461
Query: 576 R 576
R
Sbjct: 462 R 462
>gi|393765818|ref|ZP_10354378.1| GTP-binding protein EngA [Methylobacterium sp. GXF4]
gi|392728710|gb|EIZ86015.1| GTP-binding protein EngA [Methylobacterium sp. GXF4]
Length = 450
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 266/470 (56%), Gaps = 42/470 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+PTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG + G L F+V+D+AG
Sbjct: 3 MPTVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDVRFGGLHFRVIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE E+ + +++ R T + +F+ID R+G+ P D + +R+ + I+
Sbjct: 61 LE-ESDAATLMGRMRMQTEAAILAADVVLFVIDARAGVLPADQPFAELVRRAGCPV--IL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E GTG L+GA E+ LG GDPI SAE G G+ EL++AL+ +
Sbjct: 118 IANKAE---GGTG-LSGAY-EAFTLGLGDPIPFSAEHGEGLGELHDALKGVLPKPDPEDD 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + L++AIVGRPN GKSTL+N +L EDR+LVGPEAG+T
Sbjct: 173 EEDEDAPGGRS--------------LKVAIVGRPNAGKSTLINRMLGEDRLLVGPEAGIT 218
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA--- 415
RDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 219 RDSISLDWEWRGRKIKLHDTAGMRRRARIDDKLEKLAVSDGLRAVRFAEVVVVLLDATIP 278
Query: 416 ---EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ ++ EGR +V+ +NK DL++ L K+++E + ++PQV G+
Sbjct: 279 FEKQDLTIIDLVESEGRAVVIGLNKWDLVA--DQPGLLKQLRE----DCTRLLPQVRGVA 332
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
VV S L G G +M V+ + W R+ TSR+N WL + R+ S + KI+Y
Sbjct: 333 VVPLSGLAGEGLDKLMQAVVQAAEVWDKRISTSRINDWLSEATSRNPPPAVSGRRIKIRY 392
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQVK+RPP F F + L + R+L L+E F+L G PIR++ R+
Sbjct: 393 ATQVKSRPPHFALFGNQLNALPKSYTRYLVNGLREAFELPGTPIRLSLRT 442
>gi|254294311|ref|YP_003060334.1| GTP-binding protein EngA [Hirschia baltica ATCC 49814]
gi|254042842|gb|ACT59637.1| small GTP-binding protein [Hirschia baltica ATCC 49814]
Length = 483
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 260/475 (54%), Gaps = 42/475 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ ++ ALV + P VTRD +E +LGDL ++D+AG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKKIALVDDQP--GVTRDRKEARGRLGDLELDLIDTAGFD- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
+ S+ R T +A+ ++++ID R G+ P+D K LR+ KP I+
Sbjct: 62 DVNDASLEARMRRQTEMAIAEADVSLYVIDARVGVTPIDRVFSKLLRQAD---KPTILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--------RPSVED 293
NKCE G E+ LGF +P+A+SAE G GM++LY+AL P E
Sbjct: 119 NKCEGRQGDVG-----LTEAFSLGFNEPVALSAEHGEGMSDLYQALLEAAPELTSPEAEQ 173
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
R +D + + +++ + + P++ +VGRPN GKSTLLN+LLQ DR+L G
Sbjct: 174 EEERAWDDDFVEFDPEAEEIEA----PPERPMKFTVVGRPNAGKSTLLNSLLQSDRLLTG 229
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRDSV V +EY+GR + LVDTAG ++ K ++ +S ++ ++ A VVA+V
Sbjct: 230 PEAGITRDSVTVAWEYEGREMRLVDTAGLRKKAKVQERLEKMSTGETIHSIKYADVVAIV 289
Query: 413 LDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+D+ + + EGRG+V + K DL+ +N +++ + + + ++P
Sbjct: 290 MDSRDAFEKQDLQIADLVLREGRGVVFVCTKWDLV---ENGG---ELRKELEDKARRLLP 343
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q G P++ S GR +M ++ W R+ T LN W++ + +H Q
Sbjct: 344 QAKGAPLLTVSGETGRNLDKMMVAAAKVFEDWSARIKTRDLNNWMQHTIQKHPPPAPGGQ 403
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K +Y Q+K RPPTF+ S + ++ R+L L+E FDL G+PIR+ R
Sbjct: 404 RIKPRYMAQMKTRPPTFIMMASRGDQMPESYKRYLVNGLREAFDLPGVPIRLIIR 458
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L++AIVGRPNVGKSTL N L+ + LV + G+TRD + L+DTAG+
Sbjct: 1 MALKVAIVGRPNVGKSTLFNRLVGKKIALVDDQPGVTRDRKEARGRLGDLELDLIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLM---RAHVVALVLDA 415
+ ASL R+ M A V V+DA
Sbjct: 61 ----DDVNDASLEARMRRQTEMAIAEADVSLYVIDA 92
>gi|162149029|ref|YP_001603490.1| GTP-binding protein EngA [Gluconacetobacter diazotrophicus PAl 5]
gi|161787606|emb|CAP57202.1| GTP-binding protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 479
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 188/474 (39%), Positives = 265/474 (55%), Gaps = 35/474 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+ALV +TP VTRD +E + R +++D+AG
Sbjct: 13 LPVVVIAGRPNVGKSTLFNRLVGRRQALVADTPG--VTRDRKEAETVMRGRRVRLVDTAG 70
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + ++ R + + +A+ +F ID R+G+ P D WLR+ Q +P++
Sbjct: 71 LE-EAAADTLYGRMRASSESAVAQADLVLFCIDTRAGITPADEHFAAWLRR---QGRPVL 126
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPSVEDY 294
+ NK E AA E+ LG G P+AISAE G G M E+ + L P
Sbjct: 127 LIANKAEGRQGAA-----AAMEAFALGLGTPLAISAEHGEGLSDLMGEIADRLPPQAPAL 181
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + D+ +++ + + EDD PL+LAIVGRPN GKSTLLN LL E+R++ GP
Sbjct: 182 VAGGMADAAFEDDDAEAG-EADEDDRPVGPLRLAIVGRPNAGKSTLLNRLLGEERMITGP 240
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
E GLTRDSV V + + LVDTAG +R + E+ +SV + + L A VV L L
Sbjct: 241 EPGLTRDSVTVLLHDEHGPIQLVDTAGLRRRGRIEESLEKMSVSATIEALKMAEVVVLTL 300
Query: 414 DA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R +E EGR V+ +NK D + R + ++A+ I+T + Q
Sbjct: 301 DATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRIAT------RQAISDRIETSLAQ 354
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ GIPVV SAL G G ++ V + W R+PT LNRW ++ RHS S +
Sbjct: 355 MRGIPVVSFSALTGAGVNKLLPVVRRAHATWNKRVPTGALNRWFEAMLERHSPPLVSGRR 414
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ KARPPTF+ F + + L + R+L L+E FDL G PIR+ R
Sbjct: 415 LKLRYMTQAKARPPTFILFGTRAEQLPEDYQRYLVNGLRETFDLPGTPIRLLLR 468
>gi|103487684|ref|YP_617245.1| GTP-binding protein EngA [Sphingopyxis alaskensis RB2256]
gi|98977761|gb|ABF53912.1| Small GTP-binding protein domain [Sphingopyxis alaskensis RB2256]
Length = 456
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 260/480 (54%), Gaps = 60/480 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG KL L F+++D+AG E
Sbjct: 6 TIAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDRREGDGKLLGLEFRIVDTAGFE 63
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ + ++ R T + + A+F+ID R+G+ PLD E+ +WLR + I+
Sbjct: 64 DQ-DAATLPGRMRAQTEKAVREADAALFLIDARAGVTPLDEEIARWLRSEDTPV--ILCA 120
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LGF A+SAE G G+ +L++ALRP VE +M
Sbjct: 121 NKAEGKQGEAGLM-----EAYSLGFETVFALSAEHGEGLVDLFDALRPIVEPFM------ 169
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++ T V D+E+ P++LAIVGRPN GKSTL+N ++ EDR++ GPEAG+TRD
Sbjct: 170 -----DAETAAVDEA-DEEAAGPMKLAIVGRPNAGKSTLINRMIGEDRLITGPEAGITRD 223
Query: 362 SVRVHFEYQG----RTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
S+RV + ++ + L DTAG +R K + LSV + + A VV L+LDA
Sbjct: 224 SIRVDWRWEKDGEVHEIQLFDTAGMRKRAKVQDKLEKLSVADALHAVDFAEVVVLLLDAT 283
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R ++EGR L+V +NK D+ S+L+ V+ A+ + QV G
Sbjct: 284 KGLEAQDLRIADRVLQEGRALIVALNKWDI--AEDPSSLFNGVRAALDDGLS----QVKG 337
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP--- 523
+PV+ S G+G ++ + W R+ T++LNRW + +A P
Sbjct: 338 VPVLSISGATGKGIDTLVRVAFEQRAIWTNRVSTAKLNRWFEAAV--------TANPPPA 389
Query: 524 ------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ + RPPTFV F S L + R+L ++++ G+P+R+ R+
Sbjct: 390 PGGKRIKLRYITQARTRPPTFVVFGSRTDALPGSYERYLVNGMRKELGFQGVPVRLNFRN 449
>gi|315499685|ref|YP_004088488.1| ribosome-associated gtpase enga [Asticcacaulis excentricus CB 48]
gi|315417697|gb|ADU14337.1| ribosome-associated GTPase EngA [Asticcacaulis excentricus CB 48]
Length = 550
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 257/468 (54%), Gaps = 42/468 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL ++ A+V + P VTRD R +GD+ ++D+AG E
Sbjct: 27 IAIVGRPNVGKSTLFNRLAGKKLAIVDDQPG--VTRDRRYASGHIGDIDLDLIDTAGFED 84
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
A + S+ R T + + A+F++D R G+ PLD LR + KP++ +
Sbjct: 85 VADT-SLEARMRQQTEKAIEECDVALFVMDAREGVVPLDRIFADILRF---KDKPVILIA 140
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G AGA E+ +LGFG P+ +SAE G G++ELYEAL E Y + D
Sbjct: 141 NKAE----GHAGFAGAE-EAHVLGFGAPLHLSAEHGEGISELYEAL----EKYRQLIEGD 191
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ + T P +++AI+GRPN GKSTL+N LL EDR+L GPEAG+TRD
Sbjct: 192 FIADEDEDEDEDTKP--------VRIAIIGRPNAGKSTLINRLLGEDRLLTGPEAGITRD 243
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVRA 420
S+ V +EY+GR + LVDTAG ++ + ++ LS + + + A VV LV+D E
Sbjct: 244 SISVDWEYEGRKIRLVDTAGLRRKARVQEKLEKLSTADTIRAITFAEVVILVMDQENAFE 303
Query: 421 VE----------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+ EGR L+ +++K D + Q R+ E + + + ++PQ+ G P V
Sbjct: 304 TQDLQIADLVEREGRALIYVISKWDTVEEPQ-----ARLHE-LSEIAERMLPQLRGAPFV 357
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKYFT 529
SAL GRG +M V+ Y+ W ++ T LN WL+ + RH + K KY
Sbjct: 358 ALSALNGRGLDRLMPAVLKAYRNWSAKVKTRDLNDWLKLAIQRHPPPAVDGKRIKPKYMA 417
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q K RPPTFV F S + R+L SL+E FD+ G+PIR++ ++
Sbjct: 418 QTKGRPPTFVLFASRAYAMPAHYQRYLINSLRESFDMPGVPIRLSVKA 465
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L++AIVGRPNVGKSTL N L + +V + G+TRD + L+DTAG+
Sbjct: 23 MTLKIAIVGRPNVGKSTLFNRLAGKKLAIVDDQPGVTRDRRYASGHIGDIDLDLIDTAGF 82
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
A + Q+ K + V V+DA E
Sbjct: 83 EDVADTSLEARMR-QQTEKAIEECDVALFVMDARE 116
>gi|153007833|ref|YP_001369048.1| GTP-binding protein EngA [Ochrobactrum anthropi ATCC 49188]
gi|166225832|sp|A6WW65.1|DER_OCHA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|151559721|gb|ABS13219.1| small GTP-binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 483
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 272/491 (55%), Gaps = 59/491 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + +F++D ++GL P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ +G ++ LG G+P ISAE G GM +L +A+ + + RV
Sbjct: 118 ANKAEARGAQSGMY-----DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEE--RVFA 170
Query: 301 DSCTQNNSSTQDVTSPED--------------------DESKLPLQLAIVGRPNVGKSTL 340
D + + +V +P+ D +K PL++AIVGRPN GKSTL
Sbjct: 171 DE--KEEETADEVFTPKAVGELIGDDIEDPDEEEIPAYDATK-PLRIAIVGRPNAGKSTL 227
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
+N +L EDR+L GPEAG+TRDS+ V +E++GR + L DTAG ++ + ++ LSV
Sbjct: 228 INTMLGEDRLLTGPEAGITRDSISVDWEWRGRKIKLFDTAGLRRKSRVQEKLEKLSVADG 287
Query: 400 RKNLMRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYK 447
+ + A VV +VLDA ++++ + EGR ++ NK DL+ RQ + LY+
Sbjct: 288 LRAIRFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLIEDRQMVLADLYE 347
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
+ ++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL
Sbjct: 348 KTAR--------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRVSTGRLNRWL 399
Query: 508 RKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
V+ S + K+KY TQVK RPP FV S + + +R+L L+E FD+
Sbjct: 400 AGVIAHQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDM 459
Query: 567 GGIPIRITQRS 577
G+PIR++ R+
Sbjct: 460 PGVPIRLSLRT 470
>gi|451941601|ref|YP_007462238.1| GTP-binding protein [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451900988|gb|AGF75450.1| GTP-binding protein [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 474
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 268/479 (55%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R KL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRVHAGKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDYTLEGRMRSHTKVAIEEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+T+L +A+ +V R
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLTDLRDAIVDAVGPQ--RAFE 170
Query: 301 DSCTQNNSSTQDVTSPED----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
Q ++ Q + +D DE+K P+++AI GRPN GKSTL+N++L++DR+
Sbjct: 171 HKNEQEYTAVQSASVGDDVDDLEEGFVYDENK-PIRIAIAGRPNTGKSTLINSMLKQDRL 229
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAGLTRDS+ V +E+ + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 230 LTGPEAGLTRDSISVDWEWNDCHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVV 289
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+V DA ++++ + EGR ++ NK DL+ Q + + + ++
Sbjct: 290 VIVFDATAPFEKQDLQIADLVIREGRVPLIAFNKWDLVENSQVTLI------DLHEKCSR 343
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQV G+ V S G+G +M ++ ++ W R+ T +LNRWL V+ H
Sbjct: 344 LLPQVRGLRAVPLSGQYGQGIDKLMENIMIMHRVWNRRISTGQLNRWLETVVAHHPPPAV 403
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQ+K RPP FV S + + + LR+L+ L++ FD+ G+PIRI+ R+
Sbjct: 404 SGRRLKVKYITQIKTRPPGFVISCSRPQVMPQSYLRYLSNGLRDAFDILGVPIRISLRA 462
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD RVH + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RVHAGKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MR+H + +A+
Sbjct: 60 L----EEAGDYTL------EGRMRSHTKVAIEEAD 84
>gi|399062911|ref|ZP_10746719.1| ribosome-associated GTPase EngA [Novosphingobium sp. AP12]
gi|398033003|gb|EJL26321.1| ribosome-associated GTPase EngA [Novosphingobium sp. AP12]
Length = 493
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 261/486 (53%), Gaps = 62/486 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS L+NRL+ ++ ALV + P VTRD R G A+L L+F+++D+A
Sbjct: 35 MLPQVIIIGRPNVGKSTLWNRLVGKKLALVDDQP--GVTRDRRFGDAELLGLKFQIVDTA 92
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + + ++ R T LA A+F++D R+G+ PLD E+G+WLR A + I
Sbjct: 93 GWE-DTDAETLPGRMRKQTEAALATADVALFVVDARAGITPLDEEIGQWLR--ASPVPVI 149
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G L ES LG GDPIA SAE G+G +L+EAL P
Sbjct: 150 LLANKAEGRAGEHGVL-----ESYSLGLGDPIAFSAEHGIGTADLFEALLP--------- 195
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q + E+ PL+LAIVGRPN GKSTL+N +L EDR+L GPEAG+
Sbjct: 196 -HLEPLQPPEPEFEEEEDEEAMLLRPLKLAIVGRPNAGKSTLINRILGEDRLLTGPEAGI 254
Query: 359 TRDSVRVHFEYQG------RTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
TRDS+ + +E+ R V L+DTAG +R EK ++V +R + A VV
Sbjct: 255 TRDSITIDWEWTDPKTQDVRQVQLIDTAGMRKRANVVEK-LERMAVADARHAIDFAEVVV 313
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LDA + +EEGR L++ VNK D+ G S L+ ++ A+ + +
Sbjct: 314 LLLDATRGLEHQDLTIASKVLEEGRALIIAVNKWDVAEG--ASGLFNGIRGALDEGLA-- 369
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
QV G+P++ SA GRG ++ + W R+PT+ LNRW + S
Sbjct: 370 --QVRGVPLLTVSARTGRGLDELIAVGFSIREAWSKRVPTAALNRWFDDAL--------S 419
Query: 521 AQP---------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
A P K++Y TQ K RPP FV F + L ++ R+L ++ + +PI
Sbjct: 420 ANPPPAPGGKRIKLRYITQAKTRPPGFVVFGTRLDLLPESYRRYLINGMRRELGFEAVPI 479
Query: 572 RITQRS 577
R+ RS
Sbjct: 480 RLNLRS 485
>gi|334141342|ref|YP_004534548.1| GTP-binding protein EngA [Novosphingobium sp. PP1Y]
gi|333939372|emb|CCA92730.1| GTP-binding protein EngA [Novosphingobium sp. PP1Y]
Length = 458
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 259/486 (53%), Gaps = 63/486 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+L L+F+++D+A
Sbjct: 1 MLPQVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRFGDAELLGLKFQIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + ++ R T LA A+F++D R+GL PLD E+G WLR A + I
Sbjct: 59 GWEDDEAE-TLPGRMRKQTEASLATADVALFVVDARAGLTPLDEEIGNWLR--ASPVPVI 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NK E G G L E+ LG GDP+AISAE G GM +L+E L P +E
Sbjct: 116 VLANKAEG-RAGEGGLL----EAYSLGLGDPVAISAEHGEGMGDLFEVLLPHLEPLQPVE 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D + K PL+LAIVGRPN GKSTL+N L EDR+L GPEAG+
Sbjct: 171 EEDQEYDEEALL-----------KAPLKLAIVGRPNAGKSTLINRFLGEDRLLTGPEAGI 219
Query: 359 TRDSVRVHFEY------QGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
TRDS+ + + + R V L+DTAG ++ + EK ++V +R + A VV
Sbjct: 220 TRDSIAIDWLWTDPKTGDAREVRLIDTAGMRKKARVVEK-LERMAVADARHAIDFAEVVV 278
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LDA + + +EEGR L++ +NK D+ S L+ ++ A +
Sbjct: 279 LLLDATKGLEHQDLKIASKVLEEGRALMIAINKWDV--AEDASKLFNGIRAA----LDDG 332
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ QV G+P++ SA G+G ++ + W R+PT+ LNRW + S
Sbjct: 333 LAQVRGVPLLAVSARTGKGLDEMIAAAFSIREAWSRRVPTAALNRWFDDAL--------S 384
Query: 521 AQP---------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
A P K++Y TQ K RPP FV F + L ++ R+L L+ + +PI
Sbjct: 385 ANPPPAPGGKRIKLRYITQAKTRPPGFVLFGTRLDMLPESYRRYLINGLRRELGFEAVPI 444
Query: 572 RITQRS 577
R+T RS
Sbjct: 445 RMTLRS 450
>gi|304319918|ref|YP_003853561.1| GTP-binding protein EngA [Parvularcula bermudensis HTCC2503]
gi|303298821|gb|ADM08420.1| GTP-binding protein EngA [Parvularcula bermudensis HTCC2503]
Length = 459
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/470 (38%), Positives = 252/470 (53%), Gaps = 42/470 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ IIGRPNVGKS LFNRL R+ ALV++ P VTRD RE A GDL ++D+AGLE
Sbjct: 5 LAIIGRPNVGKSTLFNRLAGRKLALVHDEP--GVTRDRREIEATFGDLDLTLIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
EA GS+ R T + ++F+ID R+G+ D E+ + LR + IV N
Sbjct: 62 EAQQGSLQARMRAGTEKAIGLADLSLFLIDARAGVTAQDEELAQMLRSAGRPV--IVVAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K E G A E+ LG GDP+ ISAE G GM +LY+A ++ L +S
Sbjct: 120 KTE------GRGEEGAYEAYRLGLGDPVPISAEHGEGMADLYQA--------VISKLAES 165
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ + T DD K PL+LAIVGRPN GKSTL+N LL EDRVL GPEAG+TRD+
Sbjct: 166 GIDHQIKEEAETLAWDDPRK-PLRLAIVGRPNAGKSTLVNQLLGEDRVLTGPEAGITRDT 224
Query: 363 VRVHFEY----QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
+ + Y + V L DTAG +R K + LSV + + + A VVAL++DA +
Sbjct: 225 ISAEWRYVADDRDWPVKLFDTAGLRRRAKVQDKLEKLSVGDTLRAIRFAEVVALLIDATQ 284
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A++EGR LV++ NK DL+ + +A A+ + ++PQ G
Sbjct: 285 PFEKQDLQIADLALKEGRALVIVANKWDLIDDKDEAA------RALREMAGRLLPQAPGA 338
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
PVV SA GRG M V+ Y+ W ++ TS LN WL + +H + KI+
Sbjct: 339 PVVLLSAKTGRGIDRFMPHVVKVYRDWNAQVRTSDLNTWLAAAVAKHPPPAVGGRRIKIR 398
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ QV RPPTF+A L ++ R+L ++E F + +P+R+ R
Sbjct: 399 FIAQVNTRPPTFMAHCQRADYLPESYKRYLVGGIREAFGIDAVPVRLFLR 448
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
++LAI+GRPNVGKSTL N L LV E G+TRD + + + L+DTAG L+
Sbjct: 3 IRLAIIGRPNVGKSTLFNRLAGRKLALVHDEPGVTRDRREIEATFGDLDLTLIDTAG-LE 61
Query: 385 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-VRAVEE---------GRGLVVIVNKM 434
++ + + K + A + ++DA V A +E GR ++V+ NK
Sbjct: 62 EAQQGSLQARMRAGTEKAIGLADLSLFLIDARAGVTAQDEELAQMLRSAGRPVIVVANKT 121
Query: 435 DLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQV 487
+ GR Y+ + + + G+ ++ + + + HQ+
Sbjct: 122 E---GRGEEGAYEAYRLGLGDPVPISAEHGEGMADLYQAVISKLAESGIDHQI 171
>gi|440227457|ref|YP_007334548.1| ribosome-associated GTPase EngA [Rhizobium tropici CIAT 899]
gi|440038968|gb|AGB72002.1| ribosome-associated GTPase EngA [Rhizobium tropici CIAT 899]
Length = 476
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 271/480 (56%), Gaps = 43/480 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLIDLRFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F++D + GL +D + + LRK +P+V +
Sbjct: 62 -EAGEETLEGRMRAQTEAAIDEADLTLFVVDAKMGLTHVDKTLAEMLRKRG---RPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ +
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPCPISAEHGQGMMDLRDAIVEAIGPERAFPED 172
Query: 301 DSCTQNNSS----------TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + N S + P D+++ PL++AIVGRPN GKSTL+N L EDR+
Sbjct: 173 EDEAETNVSIPRSEVGEDGEEIDEEPAYDDTR-PLRVAIVGRPNAGKSTLINRFLGEDRL 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHV 408
L GPEAG+TRDS+ V + ++GRTV + DTAG ++ K EK LSV + + + A
Sbjct: 232 LTGPEAGITRDSISVDWSWRGRTVKMFDTAGMRRKAKVIEK-LEKLSVADTLRAIRFAET 290
Query: 409 VALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V +V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 291 VVIVFDATIPFEKQDLQIVDLVIREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTD 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
++PQ GI + + G G +M ++DT + W R+ T+RLNRWL +H
Sbjct: 345 RLLPQARGIRAIPIAGQTGEGLDRLMQAIVDTDKVWNKRVSTARLNRWLETQQVQHPPPA 404
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + L ++ +R+L L+ DF + G+PIRI R+
Sbjct: 405 VSGRRIKLKYMTQVKARPPAFMISCTRSDALPESYVRYLINGLRADFAMPGVPIRIHFRT 464
>gi|209545222|ref|YP_002277451.1| GTP-binding protein EngA [Gluconacetobacter diazotrophicus PAl 5]
gi|209532899|gb|ACI52836.1| small GTP-binding protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 479
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 260/478 (54%), Gaps = 43/478 (8%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL+ RR+ALV +TP VTRD +E + R +++D+AG
Sbjct: 13 LPVVVIAGRPNVGKSTLFNRLVGRRQALVADTPG--VTRDRKEAETVMRGRRVRLVDTAG 70
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + ++ R + + +A+ +F ID R+G+ P D WLR+ Q +P++
Sbjct: 71 LE-EAAADTLYGRMRASSESAVAQADLVLFCIDTRAGITPADEHFAAWLRR---QGRPVL 126
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPS---- 290
+ NK E AA E+ LG G P+AISAE G G M E+ + L P
Sbjct: 127 LIANKAEGRQGAA-----AAMEAFALGLGTPLAISAEHGEGLSDLMGEIADRLPPQAPVP 181
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
V M + + EDD PL+LAIVGRPN GKSTLLN LL E+R+
Sbjct: 182 VAGGMADAAFEDDDAEAGEAE-----EDDRPVGPLRLAIVGRPNAGKSTLLNRLLGEERM 236
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ GPE GLTRDSV V + + LVDTAG +R + E+ +SV + + L A VV
Sbjct: 237 ITGPEPGLTRDSVTVLLHDEHGPIQLVDTAGLRRRARIEESLEKMSVSATIEALKMAEVV 296
Query: 410 ALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
L LDA + R +E EGR V+ +NK D + R + ++A+ I+T
Sbjct: 297 VLTLDATLGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRIAT------RQAISDRIET 350
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ Q+ GIPVV SAL G G ++ V + W R+PT LNRW ++ RHS
Sbjct: 351 SLAQMRGIPVVSFSALTGAGVNKLLPVVRRAHATWNKRVPTGALNRWFEAMLERHSPPLV 410
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
S + K++Y TQ KARPPTF+ F + + L + R+L L+E FDL G PIR+ R
Sbjct: 411 SGRRLKLRYMTQAKARPPTFILFGTRAEQLPEDYQRYLVNGLRETFDLPGTPIRLLLR 468
>gi|260575150|ref|ZP_05843151.1| small GTP-binding protein [Rhodobacter sp. SW2]
gi|259022772|gb|EEW26067.1| small GTP-binding protein [Rhodobacter sp. SW2]
Length = 492
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 251/475 (52%), Gaps = 38/475 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD+REG AKL DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDQP--GVTRDLREGDAKLFDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + IV +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPTDEVFADILRRKNAHV--IVGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ E+ LG GDPI +SAE G GM +LY+ LRP + + R D
Sbjct: 119 NKSEGKAGDAGAI-----EAWSLGLGDPIRLSAEHGEGMDDLYDILRPIGDSFAERAEAD 173
Query: 302 SCTQNNSSTQDVTSPEDDESKL------PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D PLQ+A++GRPN GKSTL+N ++ DR+L GPE
Sbjct: 174 APLVDLDISEAEAEQEPDPQAFRPTYEKPLQIAVIGRPNAGKSTLINKIVGFDRMLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALV--- 412
AG+TRD++ V ++ + + DTAG R+K + L M L +V
Sbjct: 234 AGITRDAISVKADWFDTPIRIFDTAG--MRKKARISDKLEKMSVSDGLRAVRFAEVVVVL 291
Query: 413 ------LDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+ +++R A EGR +VV VNK DL +Q R + + ++P
Sbjct: 292 LDVETPFETQDLRIADYAETEGRAVVVAVNKWDLEGEKQEKLAELR------EMFERLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q+ G P+V SA GRG + ++ + W R+PT+RLN WL + H +
Sbjct: 346 QLRGAPLVTVSAKTGRGLDRLHAAILKAHDVWNRRVPTARLNTWLGAMTEAHPPPAPGGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQVK RPP FVA S + ++ R+L L++ FD+ G PIRI R
Sbjct: 406 RIKLRYMTQVKTRPPGFVAMCSHPDLMPESYKRYLINGLRDHFDMPGTPIRIILR 460
>gi|404317364|ref|ZP_10965297.1| GTP-binding protein Der [Ochrobactrum anthropi CTS-325]
Length = 483
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 271/491 (55%), Gaps = 59/491 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + +F++D ++GL P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ +G ++ LG G+P ISAE G GM +L +A+ + + RV
Sbjct: 118 ANKAEARGAQSGMY-----DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEE--RVFA 170
Query: 301 DSCTQNNSSTQDVTSPED--------------------DESKLPLQLAIVGRPNVGKSTL 340
D + +V +P+ D +K PL++AIVGRPN GKSTL
Sbjct: 171 DE--KEEEVADEVFTPKAVGELIGDDIEDPDEEEIPAYDATK-PLRIAIVGRPNAGKSTL 227
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
+N +L EDR+L GPEAG+TRDS+ V +E++GR + L DTAG ++ + ++ LSV
Sbjct: 228 INTMLGEDRLLTGPEAGITRDSISVDWEWRGRKIKLFDTAGLRRKSRVQEKLEKLSVADG 287
Query: 400 RKNLMRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYK 447
+ + A VV +VLDA ++++ + EGR ++ NK DL+ RQ + LY+
Sbjct: 288 LRAIRFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLIEDRQMVLADLYE 347
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
+ ++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL
Sbjct: 348 KTAR--------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRVSTGRLNRWL 399
Query: 508 RKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
V+ S + K+KY TQVK RPP FV S + + +R+L L+E FD+
Sbjct: 400 AGVIAHQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDM 459
Query: 567 GGIPIRITQRS 577
G+PIR++ R+
Sbjct: 460 PGVPIRLSLRT 470
>gi|167646460|ref|YP_001684123.1| GTP-binding protein EngA [Caulobacter sp. K31]
gi|167348890|gb|ABZ71625.1| small GTP-binding protein [Caulobacter sp. K31]
Length = 602
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 269/493 (54%), Gaps = 48/493 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL R+ ALV + P VTRD R +LGDL +++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLAGRKLALVDDQPG--VTRDRRFAHGRLGDLDLELIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
+ T S+ R T + + ++ + D R GL PLD + LRK KP+ VA
Sbjct: 62 DVTDESLEARMRAQTELAIDEADVSLLVFDAREGLTPLDKTFAEILRKRN---KPVLVAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G AAE+ LG G+PI IS E G GM ELY AL ++ L+ +D
Sbjct: 119 NKSEGKAGDHG-----AAEANSLGLGEPIQISGEHGEGMAELYAAL-IAIAPEELQGEHD 172
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
DD+ P+++AIVGRPN GKSTL+N L+ E R+L GPEAG+TRD
Sbjct: 173 ELG-------------DDK---PIKIAIVGRPNAGKSTLINRLIGEQRLLTGPEAGITRD 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V +++ GR V LVDTAG ++ K + LS + +++ A VV L++DA
Sbjct: 217 SISVDWDWGGRKVRLVDTAGLRKKAKVNEKLEKLSTGDTIRSITFAEVVLLIMDATHPFE 276
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
++++ A EGR +V ++ K DL+ Q + L V+ A + ++PQ+ G PVV
Sbjct: 277 TQDLQIADLAEREGRCVVFVLAKWDLVED-QAATLKGFVEHA-----ERMLPQLRGTPVV 330
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S G+G +M V+ +++ W ++ T LN WL+ M RH + K KY
Sbjct: 331 ALSGETGKGVDKLMPAVLKSHRDWSTKVKTRDLNDWLQMAMQRHPPPSVGGKRIKPKYMA 390
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQ 589
Q+KARPPTFV F S + + R+L SL+E FDL G+P+RIT +S ++
Sbjct: 391 QIKARPPTFVLFSSRADQMPEQYRRYLINSLRESFDLPGVPLRITIKSGANPYAEGEAKG 450
Query: 590 NTGQKVGRTFSDK 602
++G K R F K
Sbjct: 451 HSG-KGKREFERK 462
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L LV + G+TRD H + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLAGRKLALVDDQPGVTRDRRFAHGRLGDLDLELIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
E A + Q+ + A V LV DA E
Sbjct: 61 EDVTDESLEARMRA-QTELAIDEADVSLLVFDARE 94
>gi|319404573|emb|CBI78179.1| GTP-binding protein [Bartonella rochalimae ATCC BAA-1498]
Length = 477
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 275/482 (57%), Gaps = 46/482 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDQPG--VTRDRRIHSAKLQDLHFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + +F++D +SG+ P DL+ +RK KPIV +
Sbjct: 62 -EADNHTLEGRMRAQTKIAIDEADLILFVLDAKSGITPSDLDFSSLIRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES ++AG E+ LG G+P ISAE G G+++L +A+ ++ + L
Sbjct: 118 SNKSES----KTAIAGEY-EAWSLGLGEPCPISAEHGHGLSDLRDAIVAAIGADKVFNLR 172
Query: 301 DSCTQNNSSTQ--------DVTSPED---DESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ ++ Q D T ED DE K +++A+VGRPN GKSTL+N++L++DR
Sbjct: 173 QEKEKTYTTAQISSISDNIDNTVEEDPVYDEKK-TIRIAVVGRPNTGKSTLINSMLKQDR 231
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
+L GPEAG+TRDS+ V +E+ R + L DTAG ++ K ++ LSV+ S + + A V
Sbjct: 232 LLTGPEAGITRDSISVDWEWNNRRIKLFDTAGLRRKSKVQEKLERLSVVDSLRAIRFAEV 291
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNS--ALYKRVKEAVPQE 456
V +V DA ++++ + EGR ++ NK DL+ R + LY++
Sbjct: 292 VVIVFDATTSFEKQDLQISDLVIREGRVPIIAFNKWDLIENRHEALNTLYEKCTR----- 346
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
++PQV G+ V S L G+G +M + ++ W R+ T +LNRWL ++ +
Sbjct: 347 ---LLPQVRGLRAVPLSGLYGQGINKLMENITMMHRVWNRRISTGKLNRWLETMIINYPP 403
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
S + K+KY TQVK RPP FV S + + + LR+L+ L++ FD+ G+PIR++
Sbjct: 404 PAVSGRRLKVKYITQVKTRPPGFVISCSKSEEMPQSYLRYLSNGLRDKFDMQGVPIRLSL 463
Query: 576 RS 577
R+
Sbjct: 464 RT 465
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDQPGVTRDR-RIHSAKLQDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ + + Q++ + A ++ VLDA+
Sbjct: 60 LEEADNHTLEGRMRA-QTKIAIDEADLILFVLDAK 93
>gi|296116360|ref|ZP_06834975.1| GTP-binding protein EngA [Gluconacetobacter hansenii ATCC 23769]
gi|295977060|gb|EFG83823.1| GTP-binding protein EngA [Gluconacetobacter hansenii ATCC 23769]
Length = 470
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/471 (38%), Positives = 254/471 (53%), Gaps = 37/471 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS +FNRL+ RR+ALV +TP VTRD +E + R +++D+AG
Sbjct: 13 LPVVVIAGRPNVGKSTIFNRLVGRRQALVADTPG--VTRDRKESETTVRGRRIRLIDTAG 70
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R + + +A +F +D R+G+ P D WLR+ Q +P++
Sbjct: 71 LE-EAAPDTLFGRMRASSESAVAMADLVLFCVDARAGITPADEHFAAWLRR---QGRPVL 126
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E A AA E+ LG G P+ ISAE G G+ +L + + L
Sbjct: 127 VLANKAEGRQG-----AAAAMEAFSLGLGAPLGISAEHGEGLADLMGEIADRIPAGPLHP 181
Query: 299 LN-DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ DV P PL+LAIVGRPN GKSTLLN LL E+R++ GPE G
Sbjct: 182 RRAPRRVESEDEDGDVRPPG------PLRLAIVGRPNAGKSTLLNRLLGEERMITGPEPG 235
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
LTRDSV V + LVDTAG ++ + ++ +SV S + L A VV L LDA
Sbjct: 236 LTRDSVSVMLHDDEGPIQLVDTAGLRRKARIDETLEKMSVSASIEALKMAEVVILALDAT 295
Query: 416 --------EEVRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +E EGR V+ +NK D + R + ++A+ I+ + Q+ G
Sbjct: 296 LGVHEQDLQIARLIEREGRCCVLALNKWDAVEDRNVT------RQAIRDRIEMSLSQMRG 349
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKI 525
IPVV SAL G G ++ V Y+ W R+PT LNRW ++ RH Q + K+
Sbjct: 350 IPVVAFSALTGAGVNKLLPTVRRAYEVWNRRVPTGELNRWFEMMVSRHPPPLVQGRRLKL 409
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+Y TQ K+RPPTF+ F + + + + R+L L+E FDL G PIR+ R
Sbjct: 410 RYITQAKSRPPTFILFGTRTEQMPEDYQRYLVNGLREAFDLPGTPIRLLLR 460
>gi|114328959|ref|YP_746116.1| GTP-binding protein EngA [Granulibacter bethesdensis CGDNIH1]
gi|114317133|gb|ABI63193.1| GTP-binding protein [Granulibacter bethesdensis CGDNIH1]
Length = 483
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 189/486 (38%), Positives = 257/486 (52%), Gaps = 59/486 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I GRPNVGKS LFNRL+ RR ALV +TP VTRD +E A L K++D+AG
Sbjct: 19 LPIVAIAGRPNVGKSTLFNRLVGRRMALVADTP--GVTRDRKEAEAMLRGRLVKLIDTAG 76
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA +I R + +++ +F++D RSG+ P D WLR+ Q +P++
Sbjct: 77 LE-EAPQDTIAGRMRQSSETAVSQADLVVFVVDARSGITPADTHFASWLRR---QNRPVL 132
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY---------EALRP 289
+ NK E+ G +L E+ LG GDP+A+SAE GLG+ +L +A RP
Sbjct: 133 LVTNKAEARGAGAEAL-----EAYRLGLGDPLAVSAEHGLGIADLMREIADRLSTDADRP 187
Query: 290 SVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
S R ++ + + P+ PL+LAIVGRPN GKSTLLN LL EDR
Sbjct: 188 SDMPKRKRRGEAEAWEDEENIVEQGPPK------PLKLAIVGRPNAGKSTLLNRLLGEDR 241
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
V+ GPE GLTRDS+ V + LVDTAG +R + ++ +SV S + L A +
Sbjct: 242 VITGPEPGLTRDSISVTLSDDIGEIELVDTAGLRRRARIDESLEKMSVSASIEALKMAEI 301
Query: 409 VALVLDAEE---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V L +DA E R VE EGRG V+ + K D + R +A A+ ++
Sbjct: 302 VVLAVDATEGLHEQDLQIARLVEREGRGAVLALTKWDAVEDRGKAA------RAISDRLE 355
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
T + Q GIPVV S L G G ++ V + + W R+ T LNRW ++ RH
Sbjct: 356 TSLTQCRGIPVVTLSGLTGSGVQRLLPAVREAHAIWNKRVATGELNRWFEAMLERH---- 411
Query: 519 QSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
QP K++Y TQ KARPPTFV F + + L + R+L L+E F L G P
Sbjct: 412 ---QPPLVDGRRLKLRYMTQAKARPPTFVLFGTRAEQLPEDYQRYLVNGLREAFGLKGTP 468
Query: 571 IRITQR 576
IR+ R
Sbjct: 469 IRLQLR 474
>gi|170740822|ref|YP_001769477.1| GTP-binding protein EngA [Methylobacterium sp. 4-46]
gi|168195096|gb|ACA17043.1| small GTP-binding protein [Methylobacterium sp. 4-46]
Length = 446
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 266/471 (56%), Gaps = 49/471 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V I+GRPNVGKS LFNRL+ R+ ALV + P VTRD REG A+LG LRF ++D+AG
Sbjct: 3 MPIVAIVGRPNVGKSTLFNRLVGRKLALVDDRP--GVTRDRREGEARLGHLRFTIIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + S+ R T +A+ +F++D R+GL P D + +R+ KP++
Sbjct: 61 LE-EADAESLAGRMRAQTEAAIAEADAVLFVVDARAGLLPADQPFAELVRRAD---KPVI 116
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E A E+ LG GDP+ +SAE G GM +L +AL D +
Sbjct: 117 LLANKAEGGAGLA-----GAYEAFGLGLGDPVPVSAEHGEGMGQLIDAL----ADILPEA 167
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+D PL++AIVGRPN GKSTL+N +L EDR+LVGPEAG+
Sbjct: 168 EDDDEEGEGK---------------PLRVAIVGRPNAGKSTLINRMLGEDRLLVGPEAGI 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 213 TRDSISLDWEWRGRRIKLHDTAGMRRRARVDDKLEKLAVSDGLRAVRFAEVVVVLLDATI 272
Query: 416 ----EEVRAV----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++ V +EGR LV+ +NK DL++ L K ++E + ++PQV G
Sbjct: 273 PFEKQDLTIVDLVEQEGRALVIGLNKWDLVA--DQPGLLKELREKAAR----LLPQVRGA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M V+ W R+PT+R+N+WL + + + S + KI+
Sbjct: 327 PIVPLSGLAGEGIDRLMQGVVSASDVWNRRVPTARINQWLSEAVQANPPPAVSGRRIKIR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQVK+RPP F F + L + R+L L++ FDL G+PIR++ R+
Sbjct: 387 YATQVKSRPPHFALFGNQLDALPKSYTRYLVNGLRDAFDLPGVPIRLSLRT 437
>gi|433776397|ref|YP_007306864.1| ribosome-associated GTPase EngA [Mesorhizobium australicum WSM2073]
gi|433668412|gb|AGB47488.1| ribosome-associated GTPase EngA [Mesorhizobium australicum WSM2073]
Length = 476
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 182/480 (37%), Positives = 268/480 (55%), Gaps = 45/480 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTP--GVTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAGASTLPGRMRAQTEIAIREADLIFFTIDAKSGLLPDDRTFAEIVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ + ++
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIEALGEARAFGEDE 173
Query: 302 SCTQNNSSTQDVTSPED----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+++ +V ED D++K P+++A+VGRPN GKSTL+NAL+ E+R+L
Sbjct: 174 DTDDEDAAASEVLIGEDIADPDAEPSYDDTK-PMRIAVVGRPNAGKSTLINALIGEERLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AHV 408
GPEAG+TRDS+ V ++++GR + L DTAG R K + L VM + L A +
Sbjct: 233 TGPEAGITRDSISVDWDWRGRRIKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAEI 290
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V +V DA ++++ + EGR V+ NK DL+ Q L ++E + +
Sbjct: 291 VIIVFDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDNPQE--LLAELRE----KTE 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
++PQ GI V SA GRG +M V+ T++ W R+ T +LNRWL ++ H
Sbjct: 345 RLLPQARGIQAVPVSAETGRGLDKLMDAVLKTHKVWNSRVSTGKLNRWLEAILTHHPPPA 404
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ + K+KY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R+
Sbjct: 405 VAGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALRT 464
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAGASTLPGRMRA-QTEIAIREADLIFFTIDAK 93
>gi|126725455|ref|ZP_01741297.1| GTP-binding protein EngA [Rhodobacterales bacterium HTCC2150]
gi|126704659|gb|EBA03750.1| GTP-binding protein EngA [Rhodobacterales bacterium HTCC2150]
Length = 469
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 260/463 (56%), Gaps = 41/463 (8%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL+ +R ALV + P VTRD+REG A+LGD++F V+D+AGLE EAT S+
Sbjct: 1 MGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLGDIKFTVVDTAGLE-EATDESLQ 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNG 250
R +T + +FMID R+G+ P D LRK + + I+A NK G
Sbjct: 58 GRMRALTERAVGMADVCLFMIDARAGVLPADEVFADILRKKSAHV--ILAANK------G 109
Query: 251 TGSLA-GAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSS 309
G A G E+ LG G+PI +SAE G GM++L L P +D+ R Q++ +
Sbjct: 110 EGKAADGGVLEAYSLGLGEPIRLSAEHGEGMSDLLSILTPIADDFAKR------DQDHEA 163
Query: 310 TQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRV 365
D ED E + PLQ+A+VGRPN GKSTL+N +L E+R+L GPEAG+TRD++ +
Sbjct: 164 EVDADV-EDGERVISRERPLQIAVVGRPNAGKSTLINQILGEERLLTGPEAGITRDAISL 222
Query: 366 HFEYQGRTVYLVDTAGWLQREK-----EKGPAS--LSVMQSRKNLMRAHVVALVLDAEEV 418
F+++ V + DTAG ++ K EK S L ++ + ++ V + + +++
Sbjct: 223 AFDWEDTPVRMFDTAGMRKKAKVQDKIEKLSVSDGLRAVKFAEVVVVLLDVEIPFEQQDL 282
Query: 419 R----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSA 474
R A EGR +V+ VNK D+ +Q+ K +KE E ++PQ+ G P++ SA
Sbjct: 283 RIADLAEREGRSVVIAVNKWDIEDEKQDK--LKELKE----EFARLLPQLRGAPLITVSA 336
Query: 475 LEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKA 533
GRG + ++ ++ W R+PT+ LN WL+ ++ H + K+K+ TQ K
Sbjct: 337 KTGRGMDRLREAILWAHKVWNTRIPTAPLNEWLKDMISSHPPPAPGGRRIKLKFITQAKT 396
Query: 534 RPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
RPP FV S L D+ R+L L+EDFD+ G PIR+ R
Sbjct: 397 RPPGFVVKCSYPDKLPDSYKRYLVNGLREDFDMPGTPIRLYFR 439
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 78 VVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALF 137
+ + A D E E D VED + E+P+ + ++GRPN GKS L
Sbjct: 150 IADDFAKRDQDHEAEVDADVEDGERVISRERPL-----------QIAVVGRPNAGKSTLI 198
Query: 138 NRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMT 197
N+++ E + P+ +TRD D ++ D+AG+ +A +++ +
Sbjct: 199 NQIL--GEERLLTGPEAGITRDAISLAFDWEDTPVRMFDTAGMRKKAKVQDKIEKLS--V 254
Query: 198 ANVLAKTQFAIFMIDVRSGLHPL---DLEVGKWLRKHAPQIKPIVAMNKC---ESLHNGT 251
++ L +FA ++ + P DL + + + ++A+NK + +
Sbjct: 255 SDGLRAVKFAEVVVVLLDVEIPFEQQDLRIADLAEREGRSV--VIAVNKWDIEDEKQDKL 312
Query: 252 GSLAGAAAESLMLGFGDP-IAISAETGLGMTELYEAL 287
L A L G P I +SA+TG GM L EA+
Sbjct: 313 KELKEEFARLLPQLRGAPLITVSAKTGRGMDRLREAI 349
>gi|429769026|ref|ZP_19301153.1| ribosome biogenesis GTPase Der [Brevundimonas diminuta 470-4]
gi|429188065|gb|EKY28955.1| ribosome biogenesis GTPase Der [Brevundimonas diminuta 470-4]
Length = 541
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 263/508 (51%), Gaps = 74/508 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ +R ALV + P VTRD R +GD+ ++D+AG E
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRRYADGVIGDMDLTLIDTAGYE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIKPIVAM 241
+ T S+ R T + +FM+D R G+ LD LRK H KPI+ +
Sbjct: 62 DVTDESLEARMREQTEAAIEDADLILFMMDAREGVTSLDRIFADRLRKVH----KPIILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES +G G E+ LGFG+P+ ISAE G GM +LY+A+ + ED +
Sbjct: 118 ANKSESRESG-----GGVGEAHGLGFGEPVPISAEHGEGMADLYQAVVAASEDIFIE--- 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
E DE + P+++A++GRPN GKSTL+N L+ +DR+L GPEAG+TR
Sbjct: 170 ----------------EVDEPEKPIRIAVIGRPNAGKSTLINRLIGDDRLLTGPEAGITR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ V + ++GR + L+DTAG ++ + ++ LSV + + + A VV +V+D ++
Sbjct: 214 DSISVDWVWEGRNIRLIDTAGMRRKARVQEKLEKLSVADTIRAITFAEVVLMVMDKDDAF 273
Query: 420 AVE----------EGRGLVVIVNKMDLLSGRQNS-ALYKRVKEAVPQEIQTVIPQVTGIP 468
+ EGR LV + K DL Q A KR+ + +PQ+ G P
Sbjct: 274 DTQDLQLADLVEREGRALVYVAAKWDLEEEPQARLAELKRLAD-------DKLPQLRGSP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP----- 523
V S+ GRG +M V++ Y W +++ T LN WL S Q P
Sbjct: 327 FVALSSFNGRGVERLMPAVLEAYDTWSVKVKTKDLNDWL-------SLATQRPPPPAVDG 379
Query: 524 ---KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
K KY Q KARPPTFV S + + D R+L S++E FDL G PIR+ +S
Sbjct: 380 KRIKPKYIAQTKARPPTFVLMASRAEAMPDHYKRYLVNSIRESFDLQGTPIRLNVKS--- 436
Query: 581 KCGSSSSRQNTGQKVG--RTFSDKRTVP 606
GS++ G K G R D +T P
Sbjct: 437 --GSANPYAAGGAKSGPERFKGDAKTAP 462
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L++AIVGRPNVGKSTL N L+ + LV G+TRD + L+DTAG+
Sbjct: 1 MALKVAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGVIGDMDLTLIDTAGY 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
E A + Q+ + A ++ ++DA E
Sbjct: 61 EDVTDESLEARMR-EQTEAAIEDADLILFMMDARE 94
>gi|85373044|ref|YP_457106.1| GTP-binding protein EngA [Erythrobacter litoralis HTCC2594]
gi|84786127|gb|ABC62309.1| predicted GTPase [Erythrobacter litoralis HTCC2594]
Length = 485
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 259/486 (53%), Gaps = 52/486 (10%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+L PTV+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+L + F V+D+
Sbjct: 4 HLKPTVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRMGDAELAGMEFTVVDT 61
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
AG E + S+ R T L A+F+ID R+G+ PLD E+ +WLR ++
Sbjct: 62 AGWEDDDKD-SLPGRMRAQTEVSLEGADAALFVIDARAGITPLDEEIARWLRTV--EVPV 118
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
++ NK E G L ES LG GDP +SAE G G+ +L+E L P + +
Sbjct: 119 VLVANKAEGKAGDAGLL-----ESYALGLGDPAPVSAEHGEGIADLFEGLWPHIGHFE-- 171
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKL--PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
D+ + + EDDE PL+LAIVGRPN GKSTL+N LL EDR+L GPE
Sbjct: 172 --KDAERAAAEAAEVGEGDEDDEDAPLGPLKLAIVGRPNAGKSTLINRLLGEDRLLTGPE 229
Query: 356 AGLTRDSVRVHFEY------QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
AG+TRDS+ V +++ + R + L+DTAG +R + + LSV + + + A V
Sbjct: 230 AGITRDSISVDWQWTDPKSGEPRDIRLIDTAGMRKRARVTEKLEKLSVADAFRAVDFAEV 289
Query: 409 VALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V L+LDA + + +EEGR L++ +NK D+ S L+ ++ A+ + +
Sbjct: 290 VVLLLDATQGLEHQDLKIASKVLEEGRALMIAINKWDI--AEDASYLFNGIRAALDEGLS 347
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
QV G+P+ SA G+G ++ + + W R+PT+ LNRW + D
Sbjct: 348 ----QVRGLPLFAVSAKTGKGLDEMLRAAFEIRESWSKRVPTAALNRWFDDAL------D 397
Query: 519 QSAQP-------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
+ P K++Y TQ RPP FV F + + L + R+L ++ +P+
Sbjct: 398 ANPPPAPGGRRIKLRYITQAGTRPPRFVVFGTRLEALPKSYERYLVNGIRAKLGFEAVPV 457
Query: 572 RITQRS 577
R+ +S
Sbjct: 458 RVVLKS 463
>gi|85707619|ref|ZP_01038685.1| predicted GTPase [Erythrobacter sp. NAP1]
gi|85689153|gb|EAQ29156.1| predicted GTPase [Erythrobacter sp. NAP1]
Length = 475
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 263/482 (54%), Gaps = 56/482 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A++ L+F ++D+AG
Sbjct: 3 PQVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRMGDAEIAGLKFTIVDTAGW 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E ++ R T L A+F++D R+GL PLD E+ ++LR+H + ++
Sbjct: 61 EDE-DELTLPGRMRKQTEASLEGADAALFVVDARAGLTPLDEEIARYLREH--DVPIVLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E +G L E+ LGFG+P+A+SAE G G+ +L+ L P ++
Sbjct: 118 ANKAEGSAGESGVL-----EAYSLGFGEPLAVSAEHGEGIADLFGGLWP--------IIG 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + S ++D PL+LAIVGRPN GKSTL+N LL EDR+L GPEAG+TR
Sbjct: 165 EKADAAEVEDEIEESEDEDAPLGPLKLAIVGRPNAGKSTLINRLLGEDRLLTGPEAGITR 224
Query: 361 DSVRVHFEY------QGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALV 412
DS+ + +E+ + R + L+DTAG ++ EK LSV +R+ + A VV L+
Sbjct: 225 DSIAIDWEWTDPKSGETREIRLIDTAGMRKKRNVVEK-IEKLSVADARRAVDFAEVVVLL 283
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA + A+EEGR L+V +NK D+ + S+L+ +K+A + +
Sbjct: 284 LDATQGLEHQDLKIASLALEEGRALMVAINKWDV--AEEASSLFNGIKQA----LHDGLA 337
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+PV+ SA G+G A++ + W R+PT+ LNRW + D +
Sbjct: 338 QVRGLPVLSVSAKTGKGLDAMLGAAFTLRESWSKRVPTAALNRWFDDAL------DANPP 391
Query: 523 P-------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
P K++Y TQ RPP FV F S L + R+L ++ +P+R+T
Sbjct: 392 PAPGGRRIKLRYITQAGTRPPRFVIFGSRLDDLPKSYERYLVNGIRSKLGFEAVPVRVTL 451
Query: 576 RS 577
+S
Sbjct: 452 KS 453
>gi|402851864|ref|ZP_10899990.1| GTP-binding protein EngA [Rhodovulum sp. PH10]
gi|402497877|gb|EJW09663.1| GTP-binding protein EngA [Rhodovulum sp. PH10]
Length = 468
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 263/485 (54%), Gaps = 43/485 (8%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL+ +R ALV + P VTRD REG A+LGD+ F V+D+AGLE +A + S+
Sbjct: 1 MGKSTLFNRLVGKRVALVDDQP--GVTRDRREGFARLGDIDFTVIDTAGLE-DAPNESLA 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM-NKCESLHN 249
R T + +F++D R+GL P D +RK +P+V + NK E
Sbjct: 58 GRMRAQTEAAVEAADAVLFLVDARAGLTPDDHAFAALVRKSG---RPVVLVANKSEGRQA 114
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------EDYMLRVLND 301
G E+ LG G+P+ ISAE G G+++LY+ALR ++ E V +
Sbjct: 115 SAGVY-----EAFALGLGEPVGISAEHGEGLSDLYDALREALPEETGVAAEKTRREVEAE 169
Query: 302 SCTQNNSSTQDVTSP-----EDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
++ T P E+ + P+++A+VGRPN GKSTL+N LL DR+L GPEA
Sbjct: 170 RIAARDARDGFSTEPAEPVAEEPVVRRPIRVAVVGRPNAGKSTLINRLLGADRLLTGPEA 229
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRDS+ V + R + DTAG ++ + + LSV + + A VV +++DA
Sbjct: 230 GITRDSIAVEVFWGDRPFLIHDTAGMRRKARIDDKLEKLSVADALDAIRFAEVVVVLIDA 289
Query: 416 ------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++R + EGR LV+ +NK DL G + AL K +EA + +PQV
Sbjct: 290 TQPFDQQDLRIADLCEREGRALVIGLNKWDLAEG-ERGALTKLREEA-----ELKLPQVK 343
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-K 524
G+P+V S L G G +M V+D + W R+PT LNRWL + +G H + + K
Sbjct: 344 GLPIVAVSGLTGHGVERLMQAVVDIHTIWNRRVPTHALNRWLDEALGIHPPPAVAGRRLK 403
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS 584
+ Y TQ KARPP+F+ F + + D+ R+L L++ F+L G PIR+T R S
Sbjct: 404 LNYITQPKARPPSFILFCTRADAVPDSYKRYLVNGLRDAFELPGTPIRLTLREKANPYAS 463
Query: 585 SSSRQ 589
+ R+
Sbjct: 464 RAKRR 468
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 103 KPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIRE 162
+P+ E+PV I V ++GRPN GKS L NRL+ L P+ +TRD
Sbjct: 186 EPVAEEPVVRRPI------RVAVVGRPNAGKSTLINRLLGADRLL--TGPEAGITRDSIA 237
Query: 163 GLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHP 219
GD F + D+AG+ +A L++ + A+ L +FA + +ID
Sbjct: 238 VEVFWGDRPFLIHDTAGMRRKARIDDKLEKLS--VADALDAIRFAEVVVVLIDATQPFDQ 295
Query: 220 LDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAES---LMLGFGDPI-AISAE 275
DL + + + ++ +NK + G+L E+ L G PI A+S
Sbjct: 296 QDLRIADLCEREGRAL--VIGLNKWDLAEGERGALTKLREEAELKLPQVKGLPIVAVSGL 353
Query: 276 TGLGMTELYEAL 287
TG G+ L +A+
Sbjct: 354 TGHGVERLMQAV 365
>gi|298291071|ref|YP_003693010.1| ribosome-associated GTPase EngA [Starkeya novella DSM 506]
gi|296927582|gb|ADH88391.1| ribosome-associated GTPase EngA [Starkeya novella DSM 506]
Length = 449
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 259/467 (55%), Gaps = 43/467 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG +LG L F+V+D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDGRLGHLSFRVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + +F+ID ++G+ P D R+ I+
Sbjct: 62 -EAKAESLEGRMRAQTEAAIDDADVLLFLIDAKAGVTPSDRAFADLARRSGKHT--ILIA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ + G+L ++ LG GDP+ +SAE G GM +L AL
Sbjct: 119 NKAEARGSEGGTL-----DAYALGLGDPVELSAEHGDGMADLVRALA------------- 160
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
C +++ ++ + + ++ ++A++GRPN GKSTL+NALL EDR+L GPEAG+TRD
Sbjct: 161 ECLPDDADEEEDETTSEGGRRI--RVAVLGRPNAGKSTLINALLGEDRLLTGPEAGITRD 218
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V E G + + DTAG +R + + LSV + A VV +++DA
Sbjct: 219 SIAVDIERHGVALRVFDTAGMRKRARIDDKLEKLSVADGLRAARFAEVVVVLMDATHPFE 278
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R A EGR +V+ ++K DL+ + + KR++E E +PQ+ G PVV
Sbjct: 279 EQDLRIADLAEREGRAVVLALSKADLV--KDQPGIVKRMRE----EADHWLPQLRGAPVV 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S L G G ++ V + +Q W R+ T+ LNRWL H S + K++Y T
Sbjct: 333 LVSGLTGEGLDRLVRAVSEAHQVWNRRVATNPLNRWLNDTTSEHPPPAVSGRRIKLRYIT 392
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KARPP+FV F S L ++ +R+L +L+ FDL G+PIR+T R
Sbjct: 393 QPKARPPSFVLFCSRADALPESYVRYLVNNLRASFDLPGVPIRLTLR 439
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL----VD 378
+ + +AIVGRPNVGKSTL N L+ + LV G+TRD E GR +L +D
Sbjct: 1 MTMTVAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRD----RREGDGRLGHLSFRVID 56
Query: 379 TAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TAG + + E S + MRA A + DA+
Sbjct: 57 TAGLEEAKAE----------SLEGRMRAQTEAAIDDAD 84
>gi|395781791|ref|ZP_10462202.1| GTPase Der [Bartonella rattimassiliensis 15908]
gi|395420446|gb|EJF86722.1| GTPase Der [Bartonella rattimassiliensis 15908]
Length = 474
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 269/478 (56%), Gaps = 41/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRLI ++ ALV + P VTRD R AKL DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLIGQKLALVDDQPG--VTRDRRIHTAKLQDLCFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-A 240
EA ++ R T + + +F++D ++G+ DL + +RK KPIV
Sbjct: 62 -EAGDHTLEGRMRSHTKAAIDEADLILFVVDAKNGITLSDLNLASLVRKSG---KPIVLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK ES G E+ LG G+P +ISAE GLG ++L +A+ +V + N
Sbjct: 118 VNKSES-----RVATGGEYEAWSLGLGEPCSISAEHGLGFSDLRDAIIDAVGTERVFGRN 172
Query: 301 DS---CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ Q S D+ E+ DE+K P+++AI GRPN GKSTL+N++L++DR+L
Sbjct: 173 EEENMIIQLASVGDDINDLEEEGLIYDENK-PIRIAIAGRPNTGKSTLINSMLKQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E+ GR V L DTAG ++ K EK LSV + + + A VV
Sbjct: 232 GPEAGLTRDSISVDWEWNGRHVKLFDTAGLRRKSKVLEK-LEKLSVADTLRAIRFAEVVV 290
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR V+ NK DL+ Q + + + ++
Sbjct: 291 IVFDATIPFEKQDLQIADLVIREGRVPVIAFNKWDLVENSQTTLI------DLHEKCARF 344
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V G+G +M V+ ++ W R+ T++LN+WL V+ H S
Sbjct: 345 LPQVRGLRAVPLVGQYGQGIDKLMENVMMMHRVWNRRISTAKLNQWLETVVVHHPPPAVS 404
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP F+ S K + + LR+L L+E FDL G+P+RI+ R+
Sbjct: 405 GRRLKVKYITQVKIRPPGFMISCSRPKVMPQSYLRYLINGLRETFDLFGVPVRISLRA 462
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLIGQKLALVDDQPGVTRDR-RIHTAKLQDLCFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEEGR 425
+E G +L + MR+H A + +A+ + V + +
Sbjct: 60 L----EEAGDHTL------EGRMRSHTKAAIDEADLILFVVDAK 93
>gi|402771051|ref|YP_006590588.1| GTP-binding protein EngA [Methylocystis sp. SC2]
gi|401773071|emb|CCJ05937.1| GTP-binding protein EngA [Methylocystis sp. SC2]
Length = 466
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 259/473 (54%), Gaps = 38/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ IIGRPNVGKS LFNRL ++ ALV + P VTRD REG AKL DLRF ++D+AGLE
Sbjct: 4 SLAIIGRPNVGKSTLFNRLTGKKLALVDDRP--GVTRDRREGEAKLADLRFTIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + + +F+ID R+G+ P D +R+ KP++ +
Sbjct: 62 -EGPGPTLEGRMRAQTESAILAADAILFLIDARAGVTPDDKYFADLVRRAG---KPVILI 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G ++ LG GDP+ +SAE G GM ELY+ALR ++ +
Sbjct: 118 ANKAEGKAGEPG-----VYDAFSLGLGDPVPLSAEHGEGMGELYDALREALPEETAEPFE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + D D + PL++A+VGRPN GKSTL+N +L E+R+L GPEAG+TR
Sbjct: 173 DDVAIEENLRNDDEDGSDLDVTKPLRIAVVGRPNAGKSTLINRILGEERLLTGPEAGITR 232
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
DS+ V F ++ R + L DTAG +R + EK LS + + + + VV L++D+
Sbjct: 233 DSISVDFVWRDRKMKLFDTAGLRKRARVVDKLEK----LSAADALRAVRFSEVVVLLVDS 288
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++ A EGR +V+ + K DL+ + + R ++ + ++ Q+
Sbjct: 289 TIPFEKQDLSIADLAAREGRAVVIALGKWDLVENPGATLIKLR------EDAERLLAQLR 342
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-K 524
G PVV S G+G +M ++ ++ W R+ T RLNRWL + S + K
Sbjct: 343 GCPVVPVSGATGQGLDKLMQAIVAVHEIWNKRIGTGRLNRWLLTQIEETPPPAVSGRRIK 402
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
I+Y TQ K+RPP FV F + L + RFL L++ FDL G+PIRI++++
Sbjct: 403 IRYMTQAKSRPPHFVLFGNQLDELPTSYERFLINGLRKTFDLAGVPIRISKKA 455
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 82 EALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLI 141
EAL + EP D V + ++ E D + +D+ + ++GRPN GKS L NR++
Sbjct: 161 EALPEETAEPFEDDVAIEENLRNDDE---DGSDLDVTKPLRIAVVGRPNAGKSTLINRIL 217
Query: 142 RRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVL 201
E + P+ +TRD D + K+ D+AGL A L++ + A+ L
Sbjct: 218 --GEERLLTGPEAGITRDSISVDFVWRDRKMKLFDTAGLRKRARVVDKLEKLS--AADAL 273
Query: 202 AKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAG-- 256
+F+ + ++D DL + + + ++A+ K + + N +L
Sbjct: 274 RAVRFSEVVVLLVDSTIPFEKQDLSIADLAAREGRAV--VIALGKWDLVENPGATLIKLR 331
Query: 257 AAAESLMLGF-GDPIA-ISAETGLGMTELYEAL 287
AE L+ G P+ +S TG G+ +L +A+
Sbjct: 332 EDAERLLAQLRGCPVVPVSGATGQGLDKLMQAI 364
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAI+GRPNVGKSTL N L + LV G+TRD + +VDTAG
Sbjct: 1 MSFSLAIIGRPNVGKSTLFNRLTGKKLALVDDRPGVTRDRREGEAKLADLRFTIVDTAGL 60
Query: 383 LQREKEKGPASLSVM--QSRKNLMRAHVVALVLDA 415
E+ GP M Q+ ++ A + ++DA
Sbjct: 61 ---EEGPGPTLEGRMRAQTESAILAADAILFLIDA 92
>gi|418938523|ref|ZP_13492030.1| GTP-binding protein engA [Rhizobium sp. PDO1-076]
gi|375054755|gb|EHS51072.1| GTP-binding protein engA [Rhizobium sp. PDO1-076]
Length = 472
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 266/473 (56%), Gaps = 41/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + +F++D + GL PLD G+ LR+ KP+V +
Sbjct: 62 -ETGPDTLEGRMRAQTELAIDDADLTLFVVDAKFGLTPLDKTFGELLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS G ++ LG G+P+ ISAE G GM +L +A+ VE V
Sbjct: 118 ANKSEA----KGS-DGGFYDAYTLGLGEPVPISAEHGQGMIDLRDAI---VEAIGEDVAF 169
Query: 301 DSCTQNNSSTQDVTSPED--------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ D+ ED + PL++AI+GRPN GKSTL+N L EDR+L
Sbjct: 170 PEEIDEPETDVDLRGEEDFDDDYEPEYDDSKPLRVAIIGRPNAGKSTLINRFLGEDRLLT 229
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GR + + DTAG ++ + ++ LSV + +++ A V +
Sbjct: 230 GPEAGITRDSISVEWDWRGRMIKMFDTAGMRKKARVQEKLEKLSVADALRSIRFAETVVI 289
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V D+ ++++ V+ EGR V+ NK DL+ Q A+ ++E + ++
Sbjct: 290 VFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AVLAELRE----KTDRLL 343
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q GI V S G G +M VIDT + W R+ T++LNRWL +H S
Sbjct: 344 AQARGIRAVPISGQTGYGLDKLMQAVIDTDRVWNRRISTAKLNRWLDTQQIQHPPPAVSG 403
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY TQ+KARPP F+ + + + ++ +R+LT L+ DF++ G+PIRI
Sbjct: 404 RRLKLKYMTQIKARPPAFMISCTRPEAVPESYIRYLTNGLRNDFEMPGVPIRI 456
>gi|319784770|ref|YP_004144246.1| ribosome-associated GTPase EngA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170658|gb|ADV14196.1| ribosome-associated GTPase EngA [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 477
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/480 (37%), Positives = 265/480 (55%), Gaps = 45/480 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTPG--VTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAGASTLPGRMRAQTEIAIREADLIFFTIDAKSGLLPDDRTFAEIVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ + ++
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIGALGEARAFGEDE 173
Query: 302 SCTQNNSSTQDVTSPED----------DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ +V ED D++K P+++A+VGRPN GKSTL+NAL+ E+R+L
Sbjct: 174 DGEDEEIAAGEVLIGEDIADPDAEHTYDDTK-PMRIAVVGRPNAGKSTLINALIGEERLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AHV 408
GPEAG+TRDS+ V +++ GR + L DTAG R K + L VM + L A +
Sbjct: 233 TGPEAGITRDSISVDWDWHGRRLKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAEI 290
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V +VLDA ++++ + EGR V+ NK DL+ Q L ++E + +
Sbjct: 291 VIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDHPQE--LLAELRE----KTE 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
++PQ G+ V S GRG +M VI T++ W R+ T +LNRWL ++ H
Sbjct: 345 RLLPQARGLQAVPVSGETGRGLDKLMDAVIRTHKVWNSRVSTGKLNRWLEGILAHHPPPA 404
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ + K+KY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R+
Sbjct: 405 VAGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALRT 464
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAGASTLPGRMRA-QTEIAIREADLIFFTIDAK 93
>gi|49475207|ref|YP_033248.1| GTP-binding protein EngA [Bartonella henselae str. Houston-1]
gi|81696225|sp|Q6G5J7.1|DER_BARHE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|49238012|emb|CAF27217.1| GTP-binding protein [Bartonella henselae str. Houston-1]
Length = 475
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 273/490 (55%), Gaps = 40/490 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R A L DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRVHAATLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -ETGDHTLEGRMRAHTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA-LRPSVEDYMLRVL 299
NK ES + G E+ LG G+P +ISAE GLG+++L +A ++ S + +
Sbjct: 118 ANKSES-----KAAIGGEYEAWSLGLGEPCSISAEHGLGLSDLRDAIMKASGGERIFASK 172
Query: 300 NDS---CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N Q+ S + + E+ D+SK PL++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 NQEEHIALQSASLDDYIDNLEEKGDVYDKSK-PLRIAVAGRPNTGKSTLINRMLGQDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDATTPFEKQDLQIADLVIREGRVPLIAFNKWDLIENSQATLV------DLHEKCIRL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T +LNRWL ++ H
Sbjct: 346 LPQVRGLRAVPLSGQYGQGIDKLMENVMMMHRVWNRRISTGKLNRWLETIVAHHPPPAVL 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+ K+KY TQVK RPP FV S K + + LR+L+ L+ FD+ GIPIRI+ R+
Sbjct: 406 GRRLKVKYVTQVKTRPPGFVFSCSRPKLMPQSYLRYLSNELRNTFDMPGIPIRISLRASD 465
Query: 580 RKCGSSSSRQ 589
+ S ++
Sbjct: 466 NPFATRSKKK 475
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFE-YQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD RVH Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RVHAATLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MRAH A + +A+
Sbjct: 60 L----EETGDHTL------EGRMRAHTKAAIDEAD 84
>gi|149186494|ref|ZP_01864806.1| GTP-binding protein EngA [Erythrobacter sp. SD-21]
gi|148829721|gb|EDL48160.1| GTP-binding protein EngA [Erythrobacter sp. SD-21]
Length = 479
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 255/475 (53%), Gaps = 42/475 (8%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV+IIGRPNVGKS LFNRLI ++ ALV + P VTRD R G A++ L F V+D+AG
Sbjct: 7 PTVIIIGRPNVGKSTLFNRLIGKKLALVDDQP--GVTRDRRMGDAEIAGLEFTVVDTAGW 64
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + S+ R T L A+F++D R+G+ PLD E+ +WLR + ++A
Sbjct: 65 EDDDPE-SLPGRMRKQTEVSLEGADAALFVVDARAGITPLDEEIARWLRSQ--DVPVVLA 121
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G L ES LG G+P+ ISAE G G+ +L+ L P +
Sbjct: 122 CNKAEGRAAEPGIL-----ESYSLGLGEPMGISAEHGEGIADLFAGLWPIIGAKSEAAEA 176
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + +D++ P L+LAIVGRPN GKSTL+N LL EDR+L GPEAG+TR
Sbjct: 177 AAQAEAERDEEDLSGP--------LKLAIVGRPNAGKSTLINRLLGEDRLLTGPEAGITR 228
Query: 361 DSVRVHFEY------QGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
DS+ V +++ + R + L+DTAG +R K + LSV +++ + A VV L+L
Sbjct: 229 DSIAVDWDWFDPKANEQREIRLIDTAGMRKRAKVTEKLEKLSVADAKRAIDFAEVVVLLL 288
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + +A+EEGR L+V +NK D+ S L+ ++EA+ + + Q
Sbjct: 289 DATKGLEHQDLKIASQALEEGRALMVAINKWDI--AENASYLFNGIREALNEGLS----Q 342
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V G+P+ SA G+G ++ + + W R+PT+ LNRW + + +
Sbjct: 343 VRGVPLFAVSAKTGKGLDTMLSAAFELREAWSRRVPTAALNRWFDDALEANPPPAPGGRR 402
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ RPP FV F + L + R+L ++ +P+R+ +S
Sbjct: 403 IKLRYITQASVRPPRFVVFGTRLDDLPKSYERYLVNGIRAKLGFDAVPVRVVLKS 457
>gi|409399071|ref|ZP_11249443.1| GTP-binding protein Der [Acidocella sp. MX-AZ02]
gi|409131715|gb|EKN01404.1| GTP-binding protein Der [Acidocella sp. MX-AZ02]
Length = 448
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 254/470 (54%), Gaps = 48/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP ++I GRPNVGKS LFNRL+ R ALV +TP VTRD +E + ++ + ++D+AG
Sbjct: 4 LPRIVIAGRPNVGKSTLFNRLVGSRLALVADTP--GVTRDRKEAVCEMDGRKVVMVDTAG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA ++ R T+ + + +F+ D ++GL P D G WLR+ + +V
Sbjct: 62 LE-EAPPDTLPGRMRASTSTAVDQADLVLFVFDAKAGLLPEDRHFGTWLRRKDRPV--LV 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E G G A A E+ LGFG+P+A+SAE G+ +L
Sbjct: 119 IANKAE----GKGG-AANAMEAYELGFGEPVAVSAEHNEGIYDL---------------- 157
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + + + +D +LPL LAIVGRPN GKSTLLN LL E+R++ GPE GLT
Sbjct: 158 ---MSEIAARLPEPQALGEDGEELPLHLAIVGRPNAGKSTLLNYLLGEERMITGPEPGLT 214
Query: 360 RDSVRVHFE-YQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD+V FE G+ +VDTAG +R K ++G +S S + L RA + L +DA +
Sbjct: 215 RDAVSADFEGPDGKLYRVVDTAGLRKRAKVDEGLEKMSTSSSIEALKRAEMAVLAIDAVQ 274
Query: 418 ---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +E EGR V+ + K D + R ++ K+A I + Q+ GI
Sbjct: 275 GVQEQDLQIARLIEREGRACVIALTKWDAVEDRPDA------KKAALDRISISLSQMKGI 328
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
VV SA G G + + DTY+KW R PTS+LNRW + R + K++
Sbjct: 329 TVVPLSAETGEGVKKLFPAIRDTYEKWNTRFPTSQLNRWFESALERFPPPLVDGRRLKLR 388
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ+KARPPTF F + + + + R+L SL+E F++ G+PIRI R
Sbjct: 389 YITQIKARPPTFALFGTRAEQVPETYQRYLVNSLREVFEMPGVPIRIYLR 438
>gi|163853441|ref|YP_001641484.1| GTP-binding protein EngA [Methylobacterium extorquens PA1]
gi|218532301|ref|YP_002423117.1| GTP-binding protein EngA [Methylobacterium extorquens CM4]
gi|240140861|ref|YP_002965341.1| GTP-binding protein EngA, GTPase [Methylobacterium extorquens AM1]
gi|254563370|ref|YP_003070465.1| GTP-binding protein EngA, GTPase [Methylobacterium extorquens DM4]
gi|418059563|ref|ZP_12697508.1| GTP-binding protein engA [Methylobacterium extorquens DSM 13060]
gi|163665046|gb|ABY32413.1| small GTP-binding protein [Methylobacterium extorquens PA1]
gi|218524604|gb|ACK85189.1| small GTP-binding protein [Methylobacterium extorquens CM4]
gi|240010838|gb|ACS42064.1| GTP-binding protein EngA, GTPase [Methylobacterium extorquens AM1]
gi|254270648|emb|CAX26652.1| GTP-binding protein EngA, GTPase [Methylobacterium extorquens DM4]
gi|373566899|gb|EHP92883.1| GTP-binding protein engA [Methylobacterium extorquens DSM 13060]
Length = 446
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 261/470 (55%), Gaps = 46/470 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD REG +GD+ F+V+D+AG
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRLVGRKLALVDDRP--GVTRDRREGEGFIGDVAFRVIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + S+L R T + + +F+ID R+G+ P D + +R+ + I+
Sbjct: 61 LE-EADADSLLGRMRAQTEAAILEADAVLFVIDARAGVLPSDRPFAELVRRSGCPV--IL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E A ++ LG GDPI SAE G G+ L +ALR + +
Sbjct: 118 IANKAEGGAGMA-----GAYDAFSLGLGDPIPFSAEHGEGLGSLQDALREVLPEPDEEDE 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + L++AIVGRPN GKSTL+N ++ EDR+LVGPEAG+T
Sbjct: 173 DGEGGKG------------------LRVAIVGRPNAGKSTLINRMIGEDRLLVGPEAGIT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA--- 415
RDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 215 RDSISLDWEWRGRRIKLHDTAGMRRRARIDDKLEKLAVSDGLRAVRFAEVVVVLLDATIP 274
Query: 416 ---EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ V+ EGR +V+ +NK DL++ L K ++E + ++PQV G+
Sbjct: 275 FEKQDLTIVDLVESEGRAVVIGLNKWDLVA--DQPGLLKTLRE----DCTRLLPQVRGVS 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
VV S L G G +M V+D + W R+ T+R+N WL + R+ S + KI+Y
Sbjct: 329 VVSLSGLAGDGIDKLMQAVVDASEVWSRRVSTARINAWLTDALQRNPPPAVSGRRIKIRY 388
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQVK+RPP F F + L + R+L L+E FDL G PIR++ R+
Sbjct: 389 ATQVKSRPPHFALFGNQLDALPKSYTRYLVNGLREAFDLPGTPIRLSLRT 438
>gi|114771865|ref|ZP_01449258.1| GTP-binding protein EngA [Rhodobacterales bacterium HTCC2255]
gi|114547681|gb|EAU50572.1| GTP-binding protein EngA [alpha proteobacterium HTCC2255]
Length = 497
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 260/472 (55%), Gaps = 32/472 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV ++GRPNVGKS LFNRL+ RR ALV + P VTRD+REG AK+G ++F V+D+AGLE
Sbjct: 4 TVALVGRPNVGKSTLFNRLVGRRLALVDDQPG--VTRDLREGDAKMGPVKFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + IFM+D R+G+ P D + LRK + ++ I+
Sbjct: 62 -EATDESLQGRMRMLTERAVDMADVCIFMMDARAGVLPADRVFAEILRKKSAKV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G ++ LG G+P+ +S E G GM +L L P +++
Sbjct: 119 NKAEGNAGEVGFF-----DAFSLGLGEPVRLSGEHGEGMVDLQHVLMPISKEFEEDEDLL 173
Query: 302 SCTQNNSSTQDVTSPEDDE----SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ E ++ PLQ++I+GRPN GKSTL+N +L ++R+L GPEAG
Sbjct: 174 EPETDIDIEDLDDEDSGLEISYSAERPLQISIIGRPNAGKSTLVNQILGQERMLTGPEAG 233
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ ++ ++ + L DTAG ++ K ++ LSV + + + VV ++LDA
Sbjct: 234 ITRDSISINHDWDDVPMRLWDTAGIRKKAKVQEKLEKLSVSDGLRAVKFSEVVVVLLDAA 293
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++R A EGR +VV VNK D+ + +Q K ++E + ++PQ+ G
Sbjct: 294 IPFEQQDLRIADLAEREGRAVVVAVNKWDVETEKQEK--LKDIRE----KFTRLLPQLRG 347
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
P+V SA GRG + ++ ++ W RL TS+ NRWL + H + ++
Sbjct: 348 APLVTISAKTGRGLDRLHAAILSAHKVWNKRLSTSQCNRWLMDMTDAHPPPAPGGRRIRL 407
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQVKARPP+FV S L + R+L L+EDF + G PIRI RS
Sbjct: 408 RYMTQVKARPPSFVVMCSHPDLLPTSYNRYLVNGLREDFSMPGTPIRIFMRS 459
>gi|239831251|ref|ZP_04679580.1| small GTP-binding protein [Ochrobactrum intermedium LMG 3301]
gi|239823518|gb|EEQ95086.1| small GTP-binding protein [Ochrobactrum intermedium LMG 3301]
Length = 489
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 269/487 (55%), Gaps = 51/487 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 10 TVAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 67
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + +F++D ++GL P D + +R+ KP+V +
Sbjct: 68 -EAANDSLEARMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSG---KPVVLV 123
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED------- 293
NK E+ +G ++ LG G+P ISAE G GM +L +A+ + +
Sbjct: 124 ANKAEARGAQSGMY-----DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFADE 178
Query: 294 ---------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 344
+ +V+ + + + P D +K P+++AIVGRPN GKSTL+N +
Sbjct: 179 KEEEAEDEVFTPKVVGELIGDDIEDPDEEEIPAYDATK-PMRIAIVGRPNAGKSTLINTM 237
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNL 403
L EDR+L GPEAG+TRDS+ V +E++ R + L DTAG ++ + ++ LSV + +
Sbjct: 238 LGEDRLLTGPEAGITRDSISVDWEWRDRKIKLFDTAGLRRKSRVQEKLEKLSVADGLRAI 297
Query: 404 MRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKE 451
A VV +VLDA ++++ + EGR ++ NK DL+ RQ + LY++
Sbjct: 298 RFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLIEDRQMVLADLYEKTAR 357
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 358 --------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRVSTGRLNRWLAGVI 409
Query: 512 GRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+P
Sbjct: 410 AHQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVP 469
Query: 571 IRITQRS 577
IR++ R+
Sbjct: 470 IRLSLRT 476
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 321 SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDT 379
S + +AIVGRPNVGKSTL N L+ LV G+TRD R+H + ++DT
Sbjct: 5 SSMGFTVAIVGRPNVGKSTLFNRLVGRKLALVDDLPGVTRDR-RIHDAKLYDLKFQVIDT 63
Query: 380 AGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
AG + + A + Q+ + A V+ V+DA+
Sbjct: 64 AGLEEAANDSLEARMRA-QTEAAIQEADVILFVVDAK 99
>gi|319407564|emb|CBI81214.1| GTP-binding protein [Bartonella sp. 1-1C]
Length = 477
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 273/479 (56%), Gaps = 46/479 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDQPG--VTRDRRIHSAKLQDLHFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + +F++D +SG+ DL+ +RK KPIV +
Sbjct: 62 -EADNHTLEGRMRAQTKIAIDEADLILFVLDAKSGITRSDLDFSSLIRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES ++AG E+ LG G+P ISAE G G+++L +A+ ++ + L
Sbjct: 118 SNKSES----KIAIAGEY-EAWSLGLGEPCPISAEHGHGLSDLRDAIVAAIGADKVFNLR 172
Query: 301 DSCTQNNSSTQ--------DVTSPED---DESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ ++TQ D T ED DE K +++A++GRPN GKSTL+N++L++DR
Sbjct: 173 QEKEKTYTTTQISSISDNIDNTVEEDPVYDEKK-TIRIAVIGRPNTGKSTLINSMLKQDR 231
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
+L GPEAG+TRDS+ V +E+ R + L DTAG ++ K ++ LSV+ S + + A +
Sbjct: 232 LLTGPEAGITRDSISVDWEWNNRRIKLFDTAGLRRKSKVQEKLEKLSVVDSLRAIRFAEI 291
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNS--ALYKRVKEAVPQE 456
V +V DA ++++ + EGR ++ NK DL+ R + LY++
Sbjct: 292 VVIVFDATTSFEKQDLQISDLVIREGRVPIIAFNKWDLIENRHEALNTLYEKCTR----- 346
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
++PQV G+ V S L G+G +M + ++ W R+ T +LNRWL ++ +
Sbjct: 347 ---LLPQVRGLRAVPLSGLYGQGINKLMENITMMHRVWNRRISTGKLNRWLETMIINYPP 403
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
S + K+KY TQVK RPP FV S + + + LR+L+ L++ FD+ G+PIR++
Sbjct: 404 PAVSGRRLKVKYITQVKTRPPRFVISCSKSEEMPQSYLRYLSNGLRDKFDMQGVPIRLS 462
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDQPGVTRDR-RIHSAKLQDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ + + Q++ + A ++ VLDA+
Sbjct: 60 LEEADNHTLEGRMRA-QTKIAIDEADLILFVLDAK 93
>gi|296282892|ref|ZP_06860890.1| GTP-binding protein EngA [Citromicrobium bathyomarinum JL354]
Length = 464
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 260/480 (54%), Gaps = 46/480 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS LFNRL ++ ALV + P VTRD R G L +RF ++D+A
Sbjct: 1 MLPRVIIIGRPNVGKSTLFNRLAGKKLALVDDQP--GVTRDRRFGDVTLAGMRFTIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E S ++ R T +A +F++D R+GL PLD E+G WLR + I
Sbjct: 59 GWEDEDPS-TLPGRMRMQTEVSIADADAVLFVVDARAGLTPLDNEIGNWLRTA--DVPVI 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NK E G E+ LG G+PI ISAE G G +L+EAL P + +
Sbjct: 116 VVANKAEGRSGDAGIF-----EAYSLGLGEPIGISAEHGEGTADLFEALWPIIGEK---- 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ + + + E+DE +P L+LAIVGRPN GKSTL+N +L EDR+L GPE
Sbjct: 167 -----SEAGDALEAMDEGEEDEDGVPTGPLKLAIVGRPNAGKSTLINRMLGEDRLLTGPE 221
Query: 356 AGLTRDSVRVHFEY------QGRTVYLVDTAGWL-QREKEKGPASLSVMQSRKNLMRAHV 408
AG+TRDS+ + +E+ R V L+DTAG +R + LSV +R+ + A V
Sbjct: 222 AGITRDSIAIDWEWTDPDSGDTREVRLIDTAGMRKKRNVVEKLEKLSVADARRAVDFAEV 281
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V L+LDA ++++ A+EEGR L++ +NK D+ + + S L+ ++ A+ + +
Sbjct: 282 VVLMLDATKGLEHQDLKIASLAIEEGRALMIAINKWDVAA--EPSKLFNGIRFALDEGLA 339
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
QV G+P++ SA G+G ++ + W R+ TS LNRW + +
Sbjct: 340 ----QVRGLPLIAVSAKTGKGLDQLIAAAFQLRETWSKRVSTSALNRWFDDALEANPPPA 395
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K++Y TQ RPP FV F + L + R+L ++ + +P+R+ ++
Sbjct: 396 PGGKRIKLRYITQAGTRPPRFVVFGTRLDMLPTSYERYLVNGIRRELGFDAVPVRVVLKT 455
>gi|444312481|ref|ZP_21148063.1| GTP-binding protein Der [Ochrobactrum intermedium M86]
gi|443484171|gb|ELT46991.1| GTP-binding protein Der [Ochrobactrum intermedium M86]
Length = 483
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 269/487 (55%), Gaps = 51/487 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + +F++D ++GL P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED------- 293
NK E+ +G ++ LG G+P ISAE G GM +L +A+ + +
Sbjct: 118 ANKAEARGAQSGMY-----DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFADE 172
Query: 294 ---------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 344
+ +V+ + + + P D +K P+++AIVGRPN GKSTL+N +
Sbjct: 173 KEEEAEDEVFTPKVVGELIGDDIEDPDEEEIPAYDATK-PMRIAIVGRPNAGKSTLINTM 231
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNL 403
L EDR+L GPEAG+TRDS+ V +E++ R + L DTAG ++ + ++ LSV + +
Sbjct: 232 LGEDRLLTGPEAGITRDSISVDWEWRDRKIKLFDTAGLRRKSRVQEKLEKLSVADGLRAI 291
Query: 404 MRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKE 451
A VV +VLDA ++++ + EGR ++ NK DL+ RQ + LY++
Sbjct: 292 RFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLIEDRQMVLADLYEKTAR 351
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 --------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRVSTGRLNRWLAGVI 403
Query: 512 GRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+P
Sbjct: 404 AHQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVP 463
Query: 571 IRITQRS 577
IR++ R+
Sbjct: 464 IRLSLRT 470
>gi|395784712|ref|ZP_10464534.1| GTPase Der [Bartonella melophagi K-2C]
gi|395421972|gb|EJF88194.1| GTPase Der [Bartonella melophagi K-2C]
Length = 466
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 265/475 (55%), Gaps = 37/475 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV N P VTRD R A+L DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDNKP--GVTRDRRAHEARLQDLCFNVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A+ ++ R T + + +F++D +SG+ + +RK KPIV +
Sbjct: 62 -DASDQTLEGRMFFQTKAAIKEADLILFVLDAKSGVTVSECSFASLVRKSG---KPIVLI 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--EDYMLRV 298
NK ES G E+ LG G+P AISAE GLG ++L +A+ +V + ++
Sbjct: 118 VNKSESKMAIEGGY-----EAWSLGLGEPCAISAEHGLGFSDLRDAIVNAVGKDKVFEQI 172
Query: 299 LNDSCTQNNSSTQDVTSPED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ C S + D E DE K P+++AIVGRPN GKSTL+N++L +DR+L GP
Sbjct: 173 KEEECALTRSVSLDNDLEERGFIYDERK-PIRIAIVGRPNTGKSTLINSMLGQDRLLTGP 231
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRDS+ V +E++ R L DTAG ++ K ++ LSV + + + + VV +V
Sbjct: 232 EAGITRDSISVDWEWRDRCFKLFDTAGLRRKLKVQEKLEKLSVADTLRAIRFSEVVVIVF 291
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D ++++ + EGR ++ NK DL+ Q V + ++ ++PQ
Sbjct: 292 DTTMPFEKQDLQIADLVIREGRVPIIAFNKWDLIENCQE------VLADLHEKCARLLPQ 345
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V G+ V S G+G +M ++ ++ W R+PT +LNRWL ++ H S +
Sbjct: 346 VRGLRAVPLSGQYGKGIDKLMENIMMIHRVWNCRIPTGKLNRWLETIVAHHPPPAVSGRR 405
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KIKY TQ+K RPP F+ S + + LR+L+ L++ FD+ G+PIR+ R+
Sbjct: 406 LKIKYITQIKTRPPVFIISCSRSDAMPQSYLRYLSNGLRDTFDMPGVPIRLLLRT 460
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDNKPGVTRDRRAHEARLQDLCFNVIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVN 432
L+ ++ Q++ + A ++ VLDA+ V E G+ +V+IVN
Sbjct: 60 LEDASDQTLEGRMFFQTKAAIKEADLILFVLDAKSGVTVSECSFASLVRKSGKPIVLIVN 119
Query: 433 K 433
K
Sbjct: 120 K 120
>gi|357384061|ref|YP_004898785.1| GTP-binding protein EngA [Pelagibacterium halotolerans B2]
gi|351592698|gb|AEQ51035.1| GTP-binding protein EngA [Pelagibacterium halotolerans B2]
Length = 467
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 258/471 (54%), Gaps = 46/471 (9%)
Query: 136 LFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAG 195
+FNRL+ R+ A+V +TP VTRD REGL ++GDL F ++D+AG E +A S+ R
Sbjct: 1 MFNRLVGRKIAIVDDTP--GVTRDRREGLGRIGDLTFTLVDTAGYE-DANDDSLEARMRR 57
Query: 196 MTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLA 255
T +A+ +FMID R+GL P D + LRK I V NK E G +
Sbjct: 58 QTEMAIAEADVILFMIDARAGLTPTDEHFARLLRKADKDIH--VIGNKAEGKAAEPGLM- 114
Query: 256 GAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE--------------DY-MLRVLN 300
E+ LGFG+ I +SAE GLG+ +LY + +V+ DY M++
Sbjct: 115 ----EAYALGFGEAIPLSAEHGLGLADLYSVISQAVDKADEAKIAAAEAEFDYDMVQKPA 170
Query: 301 DSCTQNNSSTQDV---TSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
N +D T+P L +AIVGRPN GKSTL+N ++ E+R+L GPEAG
Sbjct: 171 TDVDVNEDEGEDEAGDTAPMRWNPNRHLNVAIVGRPNAGKSTLINRMVGEERLLTGPEAG 230
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ V +E++GR + LVDTAG ++ + ++ LSV S +++ A +V L+LDA
Sbjct: 231 ITRDSIMVPWEWEGRVINLVDTAGIRRKSRVQQKLEKLSVSDSLRSIQYAEIVVLLLDAT 290
Query: 416 -----EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++ + EGR +V+ VNK DL+ + L R ++ + ++PQ+ G
Sbjct: 291 IPFEKQDLALADLVEREGRAMVIAVNKWDLIEDKNAKILELR------EQCERLLPQLRG 344
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
IP+V S L+GR +M + + + W +++ T++LNRWL + H S + K+
Sbjct: 345 IPLVTMSGLQGRNIDKLMKAIFEIERTWNVKIRTAKLNRWLSAMTEHHPPPAVSGRRLKL 404
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+Y TQ K RPP+F+ F S L A R++ L+EDF L G PIR+ R
Sbjct: 405 RYMTQAKTRPPSFIIFASRPDALPKAYQRYIVNGLREDFKLPGTPIRLWVR 455
>gi|170750287|ref|YP_001756547.1| GTP-binding protein EngA [Methylobacterium radiotolerans JCM 2831]
gi|170656809|gb|ACB25864.1| small GTP-binding protein [Methylobacterium radiotolerans JCM 2831]
Length = 448
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 259/470 (55%), Gaps = 44/470 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+PTV I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG G L F+V+D+AG
Sbjct: 3 MPTVAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDVAFGGLEFRVIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + S+ R T + +F+ID R+G+ P D + +R+ + I+
Sbjct: 61 LE-EADAASLTGRMRMQTEAAILAADVVLFVIDARAGVLPADQPFAELVRRAGCPV--IL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E A E+ LG GDPI SAE G G+ EL+EAL+ ++
Sbjct: 118 IANKAEGGAGLA-----GAYEAFTLGLGDPIPFSAEHGEGLGELHEALKGALPQRDADED 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + L++AIVGRPN GKSTL+N +L EDR+LVGPEAG+T
Sbjct: 173 PDDAPGGRA----------------LKVAIVGRPNAGKSTLINRMLGEDRLLVGPEAGIT 216
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA--- 415
RDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 217 RDSISLDWEWRGRRIKLHDTAGMRRRARIDDKLEKLAVSDGLRAVRFAEVVVVLLDATIP 276
Query: 416 ---EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ V+ EGR LV+ +NK DL++ L K+++E + ++PQV G+
Sbjct: 277 FEKQDLTIVDLVESEGRALVIGLNKWDLVA--DQPGLLKQLRE----DCTRLLPQVRGVA 330
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
VV S L G G +M V+ + W R+ TSR+N WL + R+ S + KI+Y
Sbjct: 331 VVPLSGLAGDGVDKLMQAVVQAAEVWDRRVSTSRINDWLNEATSRNPPPAVSGRRIKIRY 390
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQVK+RPP F F + L + R+L L+E FDL G PIR++ R+
Sbjct: 391 ATQVKSRPPHFALFGNQLNALPKSYTRYLVNGLREAFDLPGTPIRLSLRT 440
>gi|393773224|ref|ZP_10361622.1| GTP-binding protein EngA [Novosphingobium sp. Rr 2-17]
gi|392721104|gb|EIZ78571.1| GTP-binding protein EngA [Novosphingobium sp. Rr 2-17]
Length = 458
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 256/486 (52%), Gaps = 63/486 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS +FNRL+ ++ ALV + P VTRD R G A+L L+F+++D+A
Sbjct: 1 MLPQVIIIGRPNVGKSTMFNRLVGKKLALVDDQP--GVTRDRRFGDAELLGLKFQIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + ++ R T L A+F+ID R+GL PLD E+G WLR A + I
Sbjct: 59 GWEDDEAE-TLPGRMRKQTEAALETADVALFVIDARAGLTPLDEEIGNWLR--ASPVPVI 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G G L ES LG GDP+ SAE G GM +L+EAL P ++
Sbjct: 116 LVANKAEG-RAGEGGLL----ESYSLGLGDPVPFSAEHGEGMGDLFEALLPHLDPLQPEE 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + + LAIVGRPN GKSTL+N +L EDR+L GPEAG+
Sbjct: 171 VEEVEMDEEALLLAPLK-----------LAIVGRPNAGKSTLINKILGEDRLLTGPEAGI 219
Query: 359 TRDSVRVHFEY------QGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVA 410
TRDS+ + +E+ + R V+L+DTAG +R EK ++V +R + A VV
Sbjct: 220 TRDSITIQWEWTDPKTKEARAVHLIDTAGMRKRANVVEK-LERMAVADARHAIDFAEVVV 278
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LDA R VEEGR L++ +NK D+ S L+ ++ A+ + +
Sbjct: 279 LLLDATRGLEHQDLTIASRVVEEGRALMIAINKWDV--AEDASKLFNGIRFALDEGLA-- 334
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
QV G+P++ SA G+G ++ + W R+PTS LNRW + S
Sbjct: 335 --QVRGVPLLAVSARTGKGLDEMVAAAFSIREAWSKRVPTSGLNRWFDDAL--------S 384
Query: 521 AQP---------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
A P K++Y TQ K RPP FV F + L ++ R+L ++ + +PI
Sbjct: 385 ANPPPAPGGKRIKLRYITQAKTRPPGFVIFGTRLDLLPESYKRYLINGIRRELGFDAVPI 444
Query: 572 RITQRS 577
R+ RS
Sbjct: 445 RLNLRS 450
>gi|395791352|ref|ZP_10470810.1| GTPase Der [Bartonella alsatica IBS 382]
gi|395408715|gb|EJF75325.1| GTPase Der [Bartonella alsatica IBS 382]
Length = 475
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+G PNVGKS LFNRL+ ++ ALV + P VTRD R AKL DL F V+D+AGLE
Sbjct: 4 TIAIVGCPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLHFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D + G+ P DL +RK KPIV +
Sbjct: 62 -EAADHTLEGRMRFQTKTAIDEADLILFMFDAKRGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES G E+ LG G+P ISAE GLG+T+L A+ +V +
Sbjct: 118 ANKSESKEAKKGEY-----EAWSLGLGEPCPISAEHGLGLTDLRGAIIDAVGRERAFESK 172
Query: 300 NDS---CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N+ Q +S +V ++ DE+KL +++AI GRPN GKSTL+N++L++DR+L
Sbjct: 173 NEKKYISVQPSSVGDNVEDLKEERLVCDENKL-IRIAIAGRPNTGKSTLINSMLRQDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
G EAGLTRDS+ V +E++G + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGSEAGLTRDSISVDWEWRGHRIKLFDTAGLRRKSKIQEKLEKLSVTDTLRAIRFAEVVV 291
Query: 411 LVLD------AEEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V D ++++ V+ EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDITAPFEKQDLQIVDLVIREGRVPLIAFNKWDLVENSQVTLI------DLYEKCNRL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M VI ++ W R+ T +LNRWL ++ H S
Sbjct: 346 LPQVRGLRAVPLSGQYGQGIDKLMENVIMMHRVWNRRISTGKLNRWLETIVAHHPPPAIS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP FV S K + + LR+L+ L++ FD+ G+PIRI+ R+
Sbjct: 406 GRRLKVKYITQVKTRPPGFVISCSRPKVMPQSYLRYLSNGLRDTFDMPGVPIRISLRA 463
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVG PNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGCPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L+ + Q++ + A ++ + DA+
Sbjct: 60 -LEEAADHTLEGRMRFQTKTAIDEADLILFMFDAK 93
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 85 EDTHVEPEPDGV---VEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLI 141
E ++ +P V VED K + L D N L + I GRPN GKS L N ++
Sbjct: 174 EKKYISVQPSSVGDNVEDLKEERLV--------CDENKLIRIAIAGRPNTGKSTLINSML 225
Query: 142 RRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVL 201
R+ L + + +TRD + R K+ D+AGL ++ L++ + + L
Sbjct: 226 RQDRLLTGS--EAGLTRDSISVDWEWRGHRIKLFDTAGLRRKSKIQEKLEKLS--VTDTL 281
Query: 202 AKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSL 254
+FA + + D+ + DL++ + + P++A NK + + N +L
Sbjct: 282 RAIRFAEVVVIVFDITAPFEKQDLQIVDLVIREGRV--PLIAFNKWDLVENSQVTL 335
>gi|188583713|ref|YP_001927158.1| GTP-binding protein EngA [Methylobacterium populi BJ001]
gi|179347211|gb|ACB82623.1| small GTP-binding protein [Methylobacterium populi BJ001]
Length = 446
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 261/470 (55%), Gaps = 46/470 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD REG +GD+ F+V+D+AG
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRLVGRKLALVDDRP--GVTRDRREGEGFIGDVAFRVIDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA + S+L R T + + +F+ID R+G+ P D + +R+ + I+
Sbjct: 61 LE-EADADSLLGRMRAQTEAAILEADAVLFVIDARAGVLPADRPFAELVRRSGCPV--IL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E A E+ LG GDPI SAE G G+ L +ALR + +
Sbjct: 118 IANKAEGGAGMA-----GAYEAFSLGLGDPIPFSAEHGEGLGSLQDALREVLPEPDEDEE 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + L++AIVGRPN GKSTL+N ++ EDR+LVGPEAG+T
Sbjct: 173 DEEGGKG------------------LRVAIVGRPNAGKSTLINRMIGEDRLLVGPEAGIT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA--- 415
RDS+ + +E++GR + L DTAG +R + + L+V + + A VV ++LDA
Sbjct: 215 RDSISLDWEWRGRRIKLHDTAGMRRRARIDDKLEKLAVSDGLRAVRFAEVVVVLLDATIP 274
Query: 416 ---EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ V+ EGR LV+ +NK DL++ L K ++E + ++PQV G+
Sbjct: 275 FEKQDLTIVDLVESEGRALVIGLNKWDLVA--DQPGLLKSLRE----DCTRLLPQVRGVS 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
VV S L G G +M V+D + W R+ T+R+N WL R+ S + KI+Y
Sbjct: 329 VVPLSGLAGDGIDKLMQAVVDASEVWSRRVSTARINAWLTDATQRNPPPAVSGRRIKIRY 388
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQVK+RPP F F + L + R+L L+E FDL G PIR++ R+
Sbjct: 389 ATQVKSRPPHFALFGNQLDALPKSYTRYLVNGLREAFDLPGSPIRLSLRT 438
>gi|399078314|ref|ZP_10752850.1| ribosome-associated GTPase EngA [Caulobacter sp. AP07]
gi|398033889|gb|EJL27174.1| ribosome-associated GTPase EngA [Caulobacter sp. AP07]
Length = 587
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 264/484 (54%), Gaps = 47/484 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+GRPNVGKS LFNRL R+ ALV + P VTRD R +LGDL +++D+AG E
Sbjct: 5 LAIVGRPNVGKSTLFNRLAGRKLALVDDQPG--VTRDRRFAHGRLGDLDLELIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
+ T S+ R T + + ++ + D R GL PLD + LRK KP+ VA
Sbjct: 62 DVTDESLESRMRAQTELAIEEADVSLLVFDAREGLTPLDRIFAEILRKRN---KPVLVAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G AAE+ +LG G+PI IS E G GM ELY AL ++ L+ +D
Sbjct: 119 NKSEGKAGDHG-----AAEANVLGLGEPIQISGEHGEGMAELYAALI-AIAPEELQGEHD 172
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
DD+ P+++AIVGRPN GKSTL+N L+ E R+L GPEAG+TRD
Sbjct: 173 ELG-------------DDK---PIKIAIVGRPNAGKSTLINRLIGEQRLLTGPEAGITRD 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V + + R V LVDTAG ++ K + LS + +++ A VV L++DA
Sbjct: 217 SISVDWVWGDRKVRLVDTAGLRKKAKVNEKLEKLSTGDTIRSITFAEVVLLIMDATHPFE 276
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
++++ A EGR +V ++ K DL+ Q + L ++ A + ++PQ+ G PV+
Sbjct: 277 TQDLQIADLAEREGRCVVFVLAKWDLVED-QAATLKGFIEHA-----ERMLPQLRGTPVI 330
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S G+G +M V+ +++ W ++ T LN WL+ M RH + K KY
Sbjct: 331 ALSGETGKGVDKLMPAVLKSHRDWSTKVKTRDLNDWLQMAMQRHPPPSVGGKRIKPKYMA 390
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQ 589
Q KARPPTFV F S + + R+L SL+E FDL G+P+RIT +S ++
Sbjct: 391 QTKARPPTFVLFSSRADQMPEQYRRYLINSLRESFDLPGVPLRITIKSGANPYAEGEAKG 450
Query: 590 NTGQ 593
++G+
Sbjct: 451 HSGK 454
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L LV + G+TRD H + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLAGRKLALVDDQPGVTRDRRFAHGRLGDLDLELIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
E + + Q+ + A V LV DA E
Sbjct: 61 EDVTDESLESRMRA-QTELAIEEADVSLLVFDARE 94
>gi|319406081|emb|CBI79711.1| GTP-binding protein [Bartonella sp. AR 15-3]
Length = 477
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 270/481 (56%), Gaps = 44/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AK DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDQPG--VTRDRRIHSAKFQDLHFNVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ + ++ R T +A+ +F++D +SG+ P DL+ +RK KPIV +
Sbjct: 62 -KSDNHTLEGRMRSQTKIAIAEADLILFVLDAKSGITPSDLDFSSLIRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES + G E+ LG G+P ISAE G G+++L +A+ ++ D + +
Sbjct: 118 ANKSES-----KAAIGGEYEAWSLGLGEPCLISAEHGQGLSDLRDAIVAAIGTDKIFNLR 172
Query: 300 ND-----SCTQNNSSTQDVTSPEDDES----KLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ + Q +S +V +++S K +++AIVGRPN GKSTL+N++L +DR+
Sbjct: 173 REKEKVYTAAQVSSIKDNVGDIAEEDSVYDEKKTIRIAIVGRPNTGKSTLINSMLGQDRL 232
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L G EAG+TRDSV V +E+ R + L DTAG ++ K ++ LSVM S + + A VV
Sbjct: 233 LTGSEAGITRDSVSVDWEWNNRRIKLFDTAGLRRKSKVQEKLERLSVMDSLRAIRFAEVV 292
Query: 410 ALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEAVPQEI 457
+V DA ++++ + EGR ++ NK DL+ + LY++
Sbjct: 293 VIVFDATASFEKQDLQIADLVIREGRVPIIAFNKWDLIENHHETLTTLYEKCTR------ 346
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
++PQV G+ + S G+G +M + ++ W R+ T +LNRWL ++ +
Sbjct: 347 --LLPQVRGLRAIPLSGQYGQGINKLMENITMIHRVWNRRISTGKLNRWLETMLVNYPPP 404
Query: 518 DQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
S KIKY TQVK RPP FV S K + + LR+L+ L++ FD+ G+PIR++ R
Sbjct: 405 AVSGHRLKIKYITQVKTRPPGFVISCSRSKEMPQSYLRYLSNGLRDKFDMQGVPIRLSLR 464
Query: 577 S 577
+
Sbjct: 465 T 465
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H ++Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDQPGVTRDR-RIHSAKFQDLHFNVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L++ Q++ + A ++ VLDA+
Sbjct: 60 -LEKSDNHTLEGRMRSQTKIAIAEADLILFVLDAK 93
>gi|294677824|ref|YP_003578439.1| GTP-binding protein EngA [Rhodobacter capsulatus SB 1003]
gi|294476644|gb|ADE86032.1| GTP-binding protein EngA [Rhodobacter capsulatus SB 1003]
Length = 499
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 259/475 (54%), Gaps = 39/475 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV +TP VTRD+REG A+LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDTP--GVTRDLREGDARLGDLRFVVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R +T + + +F+ID R G+ P D LRK + I+A
Sbjct: 62 L-AEDDSLQGRMRRLTERAVEEADVCLFLIDARVGVTPADEIFADILRKKNAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E + A A E+ LG G+PIA+SAE G G+ +LY+ L+P + + R
Sbjct: 119 NKAEGN-----AGAAGALEAWSLGLGEPIALSAEHGQGLDDLYDILQPLADGFAAR---- 169
Query: 302 SCTQNNSSTQDVTSPEDDESKL-------PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ Q D+ D+++ + PLQLA++GRPN GKSTL+N +L EDR+L GP
Sbjct: 170 NVAQMPEVDVDLPEDLDEDAPIRMPTEARPLQLAVIGRPNAGKSTLINKILGEDRLLTGP 229
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ V + G + + DTAG ++ + LSV + + A VV ++L
Sbjct: 230 EAGITRDAISVTKTFMGTPMRIWDTAGMRKKARVSDKLEKLSVADGLRAVRFAEVVVVLL 289
Query: 414 D------AEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D +++R A EGR +VV NK DL + R + + ++PQ
Sbjct: 290 DVNIPFEVQDLRIADFAETEGRAVVVAANKWDLEEEKTEKLKELR------ENFERLLPQ 343
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ G P+V SA G+G + + ++ Y+ W R+ T++LN WL + H +
Sbjct: 344 LRGAPLVTVSAKTGKGLDRLHNAILKAYEVWNRRISTAKLNNWLGAMTEAHPPPAPGGRR 403
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP FV + + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 404 IKLRYITQAKTRPPGFVIKATHTDQIPESYSRYLVNGLRADFDMPGTPIRLYFRD 458
>gi|326385799|ref|ZP_08207428.1| GTP-binding protein EngA [Novosphingobium nitrogenifigens DSM
19370]
gi|326209778|gb|EGD60566.1| GTP-binding protein EngA [Novosphingobium nitrogenifigens DSM
19370]
Length = 454
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 258/484 (53%), Gaps = 62/484 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A+L L F ++D+AG
Sbjct: 1 MPHVVIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRFGDAELLGLAFTIVDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + S S+ R T L A+F+ID R+GL PLD E+G+ L H + ++
Sbjct: 59 WEDDDPS-SLPGRMRAQTEAALEGATVALFVIDARAGLTPLDEEIGRHL--HESSVPVVL 115
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E +G ES LGFGDPIA SAE G G+ +L++AL P +
Sbjct: 116 LANKAEGRAGDSGLF-----ESYALGFGDPIAFSAEHGEGLADLFQALLPLI-------- 162
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + D +S L +LA+VGRPN GKSTL+N LL EDR+L GPEAG+T
Sbjct: 163 --GEPEEEEERSEDEPEYDPKSVL--KLAVVGRPNAGKSTLINRLLGEDRLLTGPEAGIT 218
Query: 360 RDSVRVHFEY------QGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALV 412
RDS+ V +E+ + R + L+DTAG ++ + LSV +R+ + A VV L+
Sbjct: 219 RDSIAVDWEWRDPATGESRPIRLIDTAGMRKKAQVVDKLERLSVADARRAIDFAEVVVLL 278
Query: 413 LDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA ++++ +EEGR L++ +NK D+ S L+ V+ A + +
Sbjct: 279 LDATRGLEHQDLKIASMVLEEGRALMIAINKWDV--AEDASGLFNGVRAA----LDDGLA 332
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P+V SA G+G ++ W R+PT+ LNRW + +A
Sbjct: 333 QVRGLPLVAVSARTGKGLDQMLGAAFSLRDAWSRRVPTAALNRWFDDAL--------TAN 384
Query: 523 P---------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
P K++Y TQ K RPP FV F + L ++ R+L ++ + +PIR+
Sbjct: 385 PPPAPGGRRIKLRYITQAKTRPPGFVLFGTRLDMLPESYRRYLVNGIRRELGFDAVPIRL 444
Query: 574 TQRS 577
T RS
Sbjct: 445 TLRS 448
>gi|121602708|ref|YP_988693.1| GTP-binding protein EngA [Bartonella bacilliformis KC583]
gi|421760502|ref|ZP_16197318.1| GTP-binding protein Der [Bartonella bacilliformis INS]
gi|166224307|sp|A1URU0.1|DER_BARBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120614885|gb|ABM45486.1| GTP-binding protein EngA [Bartonella bacilliformis KC583]
gi|411174919|gb|EKS44946.1| GTP-binding protein Der [Bartonella bacilliformis INS]
Length = 473
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 270/477 (56%), Gaps = 39/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R A+ DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGKKLALVDDKP--GVTRDRRIHAARFQDLYFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F++D +SG+ DL +RK KPIV +
Sbjct: 62 -EADDHTLEGRMRSQTKVAIDEADLILFVLDAKSGITSSDLNFASLVRKSE---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDYMLR 297
NK ES G E+ LG G+P AISAE GLG+++L +A+ +V + + +
Sbjct: 118 ANKSESKAATEGKY-----EAWSLGLGEPCAISAEHGLGLSDLRDAIVDAVGKDKAFDNK 172
Query: 298 VLNDSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D+ Q+ S + E+ DES P+++AI GRPN GKSTL+N++L +DR+L
Sbjct: 173 KEEDTIIQSASVGDNGDDLEEEGCIYDESA-PIRIAIAGRPNTGKSTLINSMLGQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ + +E++ R + L DTAG ++ K ++ LSV + + + A VV +
Sbjct: 232 GPEAGVTRDSISIDWEWRSRHIKLFDTAGLRRKSKIQEKLEKLSVTDTLRAIRFAEVVVI 291
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V D+ ++++ V+ EGR ++ NK DL+ Q + + ++ ++
Sbjct: 292 VFDSTAPFEKQDLQIVDLVIREGRVPIIAFNKWDLIENCQE------ILADLHEKCACLL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V S G+G +M + ++ W R+ T +LNRWL V+ RH S
Sbjct: 346 PQVRGLRAVPLSGQYGQGIDKLMENITMIHRIWNRRISTGKLNRWLETVVTRHPPPAISG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+K RPP F+ S + + + LR+L+ L++ FD+ G+PIR++ R+
Sbjct: 406 RRLKVKYITQIKTRPPGFMISCSRPEVMPQSYLRYLSNGLRDAFDMPGVPIRLSLRT 462
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H +Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGKKLALVDDKPGVTRDR-RIHAARFQDLYFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L+ + Q++ + A ++ VLDA+
Sbjct: 60 -LEEADDHTLEGRMRSQTKVAIDEADLILFVLDAK 93
>gi|354593873|ref|ZP_09011916.1| GTP-binding protein EngA [Commensalibacter intestini A911]
gi|353672984|gb|EHD14680.1| GTP-binding protein EngA [Commensalibacter intestini A911]
Length = 462
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/470 (38%), Positives = 250/470 (53%), Gaps = 44/470 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V+I GRPNVGKS LFNRL RR A+V + P VTRD + L D ++D+AG
Sbjct: 8 LPVVVIAGRPNVGKSTLFNRLAGRRYAIVNDQPG--VTRDRKSVEIILRDRSVSLVDTAG 65
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E ++ R + + +A +F +D RSG+ P+D +WLRK Q KPI+
Sbjct: 66 WE-EDDPQTVFGRMRKSSESAVASADVVVFCVDARSGITPVDEHFAQWLRK---QGKPII 121
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK E H G AA E G G+P +SAE G G+ +L EA+ ++ + +
Sbjct: 122 LAVNKAEG-HAGDI----AALEMYSFGLGEPYPVSAEHGQGVGDLIEAVLDALPNEDDEI 176
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D N PL+LAIVGRPN GKSTL+N LL E RV+ GPEAGL
Sbjct: 177 FEDFDDDNVDR--------------PLKLAIVGRPNAGKSTLVNQLLGEQRVITGPEAGL 222
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V + V LVDTAG ++ + ++ +SV S + L A VV LV+DAE
Sbjct: 223 TRDSISVFLRDEEGEVELVDTAGLRRKARIDETLEKMSVSASLEALKMAEVVVLVIDAEL 282
Query: 418 ---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +E EGR V+ +NK D+L R+ V++ + I+ + Q+ GI
Sbjct: 283 GVHEQDLQIARLIEREGRCCVLALNKWDILEDREA------VRQKIKDRIEISLTQMNGI 336
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIK 526
VV SAL GRG ++ V Y W R+PT LNRW + + RH+ + + KI+
Sbjct: 337 AVVSFSALTGRGVHKLLPAVRRAYAIWNKRVPTGALNRWFEEAITRHNPPMVEGRRLKIR 396
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ+K RPPTFV F + + R+L L+ FD+ G PIR+ R
Sbjct: 397 YITQIKGRPPTFVLFGTRTSKIPMDYQRYLVNGLRATFDMPGTPIRLQFR 446
>gi|126736006|ref|ZP_01751750.1| GTP-binding protein EngA [Roseobacter sp. CCS2]
gi|126714563|gb|EBA11430.1| GTP-binding protein EngA [Roseobacter sp. CCS2]
Length = 485
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 264/470 (56%), Gaps = 31/470 (6%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG ++ DLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEGRIADLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R+G+ P D LRK + I+A
Sbjct: 62 -EATDDSLQGRMRRLTERAVEMADVCLFMIDARAGVLPADEVFADILRKKNANV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK G G A A+ E+ LG G+PI +SAE G GM EL + LRP + + +
Sbjct: 119 NK------GEGKAADASILEAYALGLGEPIRMSAEHGEGMGELMDVLRPIADAHAEQAAA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D+ + +D ++ PLQ+A+VGRPN GKSTL+N ++ E+R+L GPEAG+T
Sbjct: 173 DAPEVDVDVGEDDEDAARVPTRAKPLQIAVVGRPNAGKSTLINKIIGEERLLTGPEAGIT 232
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA------HVVALV 412
RD++ V ++ G + + DTAG ++ K ++ LSV + + A V +
Sbjct: 233 RDAISVQQDWGGVPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDVEIP 292
Query: 413 LDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ +++R A EGR +VV VNK D+ +Q+ ++KE + Q+ + ++PQ+ G P
Sbjct: 293 FEQQDLRIADLAEREGRAVVVAVNKWDVEVEKQS-----KLKE-LRQDFERLLPQLRGAP 346
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+V SA G+G + ++ + W R+ T+ LNRWL ++ +H + K++Y
Sbjct: 347 LVTVSAKTGKGLDRLQQAIMRAHDVWNRRVSTANLNRWLTGMLEQHPPPAPGGKRIKMRY 406
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQVK RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 407 MTQVKTRPPAFVVMTSHPDMMPESYKRYLVNGLRVDFDMPGTPIRLFLRD 456
>gi|384262891|ref|YP_005418079.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
gi|378403993|emb|CCG09109.1| Small GTP-binding protein domain [Rhodospirillum photometricum DSM
122]
Length = 516
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 248/468 (52%), Gaps = 60/468 (12%)
Query: 156 VTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRS 215
VTRD RE +L DL F+++D+AGLE EA + R T L + A+ +ID R+
Sbjct: 57 VTRDRREAPGRLADLSFRIVDTAGLE-EAGPEVLEGRMRQQTDRALTEAHVALMLIDARA 115
Query: 216 GLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAE 275
G+ PLD LRK AP I I+ NKCE G+ G E+ LG GDP+ +SAE
Sbjct: 116 GVTPLDAHFADLLRK-AP-IPVILVANKCEG-----GAGKGGLYEAYGLGLGDPVPLSAE 168
Query: 276 TGLGMTELYEALRPSVEDYMLRVLNDSCTQN----------------NSSTQDVTSPEDD 319
G G+ LY+ALRP + +M + + D P+D
Sbjct: 169 HGEGLGVLYDALRPFHDAHMAEEAKAEADAAYAALLAAGAQARDVGPDGAALDALEPDDI 228
Query: 320 E-----------------SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
E + P+Q+AIVGRPN GKSTL+N LL E+R++ GPEAG+TRD+
Sbjct: 229 ELADGEDNDFAVEAIDPRGERPIQVAIVGRPNTGKSTLINRLLGEERLVTGPEAGVTRDA 288
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
+ V + + GR LVDTAG ++ + E L V ++ + A V L+LDA V
Sbjct: 289 IAVDWGWGGRRFRLVDTAGLRRKARIENSLEKLMVAETLNAIRLAEVCVLLLDANMVMDR 348
Query: 419 -------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVF 471
V+EGR LV+ VNK D + R A +RV + +++ + QV G+P V
Sbjct: 349 QDLTIARMVVDEGRALVIGVNKWDACTDR--GATLQRVAD----RLESSLAQVRGVPNVT 402
Query: 472 TSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK--DQSAQPKIKYFT 529
SAL+GRG +M V+ + +W R+ TSRLNRWL+ ++ RH + KI+Y T
Sbjct: 403 LSALQGRGLDQLMEAVLLVHGRWNRRVSTSRLNRWLQGMLERHPLPLGKHGRRLKIRYAT 462
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q K RPPTF F++ L ++ +R+LT L+EDFD+ GIPIR+ R+
Sbjct: 463 QAKIRPPTFALFMTRPDDLPESYVRYLTSGLREDFDMAGIPIRLLFRA 510
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 82 EALEDTHVEPEPDGVVEDHKVK---PLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFN 138
+ALE +E DG D V+ P E+P+ V I+GRPN GKS L N
Sbjct: 221 DALEPDDIE-LADGEDNDFAVEAIDPRGERPIQ-----------VAIVGRPNTGKSTLIN 268
Query: 139 RLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDR-TAGMT 197
RL+ E + P+ VTRD G RF+++D+AGL +A + L++ T
Sbjct: 269 RLL--GEERLVTGPEAGVTRDAIAVDWGWGGRRFRLVDTAGLRRKARIENSLEKLMVAET 326
Query: 198 ANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGA 257
N + + + ++D + DL + + + + ++ +NK ++ + +L
Sbjct: 327 LNAIRLAEVCVLLLDANMVMDRQDLTIARMVVDEGRAL--VIGVNKWDACTDRGATLQRV 384
Query: 258 A---AESLMLGFGDP-IAISAETGLGMTELYEAL 287
A SL G P + +SA G G+ +L EA+
Sbjct: 385 ADRLESSLAQVRGVPNVTLSALQGRGLDQLMEAV 418
>gi|312114899|ref|YP_004012495.1| ribosome-associated GTPase EngA [Rhodomicrobium vannielii ATCC
17100]
gi|311220028|gb|ADP71396.1| ribosome-associated GTPase EngA [Rhodomicrobium vannielii ATCC
17100]
Length = 464
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 255/474 (53%), Gaps = 48/474 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL RR ALV + P +TRD +E ++ + D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLAGRRLALVDDLP--GLTRDRKETQIRINRRDVVLTDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVA 240
+A GSI R + +A++ +F+ID R+ L +D + +R KP I+
Sbjct: 62 -DAEPGSIAARMREQSEQAIAESDLILFVIDARAELTSVDRGIADLVRSSG---KPFILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G S LG G+P+ +SAE +G+ +L M V N
Sbjct: 118 ANKSESRASDAGYYG-----SYELGLGEPLPVSAEHNMGLGDL-----------MAEVTN 161
Query: 301 DSCTQNNSSTQDVTSPEDDE------SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ ++ D PEDDE PL+LAI GRPN GKSTL+NALL E+R++ GP
Sbjct: 162 -RLDEIATARGDEPEPEDDELTEEQARARPLKLAIAGRPNAGKSTLVNALLGEERMITGP 220
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAGLTRD++ F+++GR V L DTAG ++ + +L+V + + + A +V L+L
Sbjct: 221 EAGLTRDAIAADFQWRGRKVRLYDTAGLRRKARINVRSETLAVGDALRAIRFAEIVVLLL 280
Query: 414 DAEE---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+ VE EGRGLV VNK DL+ Q + L + K A + ++PQ
Sbjct: 281 DAQSPLDKQDLTIADLVEREGRGLVFAVNKWDLVPEPQ-AYLAELRKSA-----ERILPQ 334
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ G P+V SA+ GRG VM + W R+ T+ LNRW + +H + +
Sbjct: 335 LAGAPLVPVSAISGRGLDKVMDAAFKVNEAWNKRISTAALNRWFATALDKHQPPAVAGRR 394
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ ARPPTF+ F S + L D+ LR+L LK+ F LG P+R+ R
Sbjct: 395 LKLRYITQSNARPPTFIVFSSRPEALPDSYLRYLVNDLKKSFGLGPSPVRLHVR 448
>gi|84517346|ref|ZP_01004700.1| GTP-binding protein EngA [Loktanella vestfoldensis SKA53]
gi|84508826|gb|EAQ05289.1| GTP-binding protein EngA [Loktanella vestfoldensis SKA53]
Length = 485
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 175/474 (36%), Positives = 259/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG +L DLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEGRLADLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T + +FMID R+G+ P D LRK + I+A
Sbjct: 62 -EATDDSLQGRMRRLTERAVEMADVCLFMIDARAGVLPADQVFADILRKKNANV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E L E+ LG G+PI ISAE G GM EL + LRP + + R D
Sbjct: 119 NKGEGRAADNTIL-----EAYALGLGEPIRISAEHGEGMGELMDVLRPISDAFEERAALD 173
Query: 302 SC-TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ T + D +P PLQ+A+VGRPN GKSTL+N ++ E+R+L GPEAG+TR
Sbjct: 174 APETDVDVGEDDEDAPRVPTIAKPLQIAVVGRPNAGKSTLINKIIGEERLLTGPEAGITR 233
Query: 361 DSVRVHFEYQGRT-----VYLVDTAGWLQREK-----EKGPAS--LSVMQSRKNLMRAHV 408
D++ V + G + + DTAG ++ K EK S L ++ + ++
Sbjct: 234 DAISVKQVWAGPDGIGVPMRIFDTAGMRRKAKIHEKLEKLSVSDGLRAVKFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +V+ VNK D +Q+ + ++E+ + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADLAEREGRAVVIAVNKWDTEDDKQDK--LRELRES----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA G+G + ++ + W R+ T++LNRWL ++ +H +
Sbjct: 348 RGAPLVTVSAKTGKGLDKLQQAIMRAHDVWNRRVTTAQLNRWLIGMLEQHPPPAPGGKRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + ++ R+L L+ DFD+ G PIR+ R
Sbjct: 408 KMRYATQVKTRPPAFVVMTSHPDLMPESYKRYLVNGLRADFDMPGTPIRLYLRD 461
>gi|114569754|ref|YP_756434.1| small GTP-binding protein [Maricaulis maris MCS10]
gi|114340216|gb|ABI65496.1| small GTP-binding protein [Maricaulis maris MCS10]
Length = 490
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 268/507 (52%), Gaps = 62/507 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + ++GRPNVGKS LFNRL + A+V + P VTRD RE +LGDL ++D+AG
Sbjct: 5 LPRIAVVGRPNVGKSTLFNRLAGKPLAIVDDRPG--VTRDRREARGRLGDLPLLLIDTAG 62
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
+ G + A + +T+ AI +ID R+G+ PLD+ +R+
Sbjct: 63 YDDSEKDG--------LDAEMRTQTEMAIHDADLCLLLIDARAGVTPLDVVFADVIRRSG 114
Query: 233 PQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
KP++ + NKCE +G + ++ LG G+PIA SA G G+ +LY+A+
Sbjct: 115 ---KPVLLLANKCEGKAGESGLI-----DAFELGMGEPIAFSAAHGAGIGDLYDAV---- 162
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ L ++D P PL++A++GRPN GKSTL+N L+ E+R++
Sbjct: 163 ----VHTLGPMAKAARRGSKDDGDP-------PLRIAVIGRPNAGKSTLINTLIGEERLI 211
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVA 410
GPEAG+TRD++ V + + GR V L DTAG +R K +S + + + A VV
Sbjct: 212 TGPEAGITRDAISVDWVWDGRRVRLHDTAGLRKRGKVADRLERMSAADTLRAVKFAEVVL 271
Query: 411 LVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L++DAE A +EGR + + V+KMDL+ R+ A K ++ E + +
Sbjct: 272 LLMDAEHPLEKQDLHLADMAYKEGRAVAIAVSKMDLVPNRE--AYLKEIR----LEFERL 325
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ+TG PV+ SAL+ +G A+M + ++ W ++ T LN WL ++ RH +
Sbjct: 326 LPQMTGAPVLPMSALKKKGLDAIMPTLAKLHENWDAKVKTRDLNDWLHEMTERHPPPAVN 385
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS-- 577
+ K +Y TQ K RPPTFV S L ++ R+L L+E FDL G+PIR+ ++
Sbjct: 386 GRRIKPRYMTQTKGRPPTFVLMCSRASDLPESYKRYLVNGLREAFDLPGVPIRLIVKAGK 445
Query: 578 VPRKCGSSSSRQNTGQKVGRTFSDKRT 604
P G TG+K G+ RT
Sbjct: 446 NPYVDGDRGG-SGTGEKAGKPSHPNRT 471
>gi|319899216|ref|YP_004159309.1| GTP-binding protein [Bartonella clarridgeiae 73]
gi|319403180|emb|CBI76739.1| GTP-binding protein [Bartonella clarridgeiae 73]
Length = 478
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 268/483 (55%), Gaps = 47/483 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV N P VTRD R AKL DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDNQP--GVTRDRRIHSAKLQDLHFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + +F++D +SG+ DL+ +RK KPIV +
Sbjct: 62 -EADNHTLEGRMRSQTKIAIDEADLILFVLDAKSGITSSDLDFASLIRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------- 291
NK ES ++AG ++ L G P +ISAE G G+++L +A+ ++
Sbjct: 118 SNKSES----KAAIAGEY-DAWSLRLGKPCSISAEHGQGLSDLRDAILDAIGADKVFDPK 172
Query: 292 ---EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
E+ + S +N P DE K +++AIVGRPN GKSTL+N++L ++
Sbjct: 173 KKKENAYITAAQVSSFSDNVDNTAEEDPVYDEKK-TIRIAIVGRPNTGKSTLINSMLGQN 231
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
R+L GPEAG+TRDS+ V +E+ R + L DTAG ++ K ++ LSV+ S + + A
Sbjct: 232 RLLTGPEAGITRDSISVDWEWNNRRIKLFDTAGLRRKSKVQEKLEKLSVIDSLRAIRFAE 291
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNS--ALYKRVKEAVPQ 455
VV +V DA ++++ + EGR ++ NK DL+ R + LY++
Sbjct: 292 VVVIVFDATASFEKQDLQISDLVIREGRVPIIAFNKWDLIENRHEALNTLYEKCTR---- 347
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
++PQV G+ V S G+G +M + ++ W R+ T +LNRWL ++ +
Sbjct: 348 ----LLPQVHGLRAVPLSGQYGQGIDKLMENITMMHRVWNRRISTGKLNRWLEMMIVNYP 403
Query: 516 WKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
S + KIKY TQVK RPP FV S + + + LR+L+ L++ FD+ G+PIR++
Sbjct: 404 PPAVSGRRLKIKYITQVKTRPPEFVISCSRSEEMPQSYLRYLSNRLRDKFDMQGVPIRLS 463
Query: 575 QRS 577
R+
Sbjct: 464 LRT 466
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDNQPGVTRDR-RIHSAKLQDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ + + Q++ + A ++ VLDA+
Sbjct: 60 LEEADNHTLEGRMR-SQTKIAIDEADLILFVLDAK 93
>gi|296532289|ref|ZP_06895028.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957]
gi|296267365|gb|EFH13251.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957]
Length = 445
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 253/471 (53%), Gaps = 48/471 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + IIGRPNVGKS LFNRL R+ A+V +TP VTRD +E A+LG +LD+A
Sbjct: 1 MLPRIAIIGRPNVGKSTLFNRLAGRKLAIVDDTP--GVTRDRKETEARLGGRAVLLLDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE EA ++ R + + +F++D R+G+ P D WLR+ + + +
Sbjct: 59 GLE-EAPPDTVAGRMRASSEAAIRDADLVLFVVDARAGITPSDRAFAAWLRRQS--VPVL 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK E G AA E+ LG GDP+AISAE G G+ +L+
Sbjct: 116 LVANKTEGRGGGM-----AAYEAYELGLGDPVAISAEHGEGIADLH-------------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
T ++ D S+ PL+LAIVGRPN GKSTLLNALL E+R++ GPE GL
Sbjct: 157 ----TTAAELLPEEEDEDARDRSR-PLRLAIVGRPNAGKSTLLNALLGEERMITGPEPGL 211
Query: 359 TRDSVRVHF-EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V V + + G V LVDTAG ++ + +G +SV + L A LVLDA
Sbjct: 212 TRDAVAVEWTDETGGKVRLVDTAGMRKKARIIEGLEQMSVAATIAALKEAEAAILVLDAN 271
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++R A EGR +++ NK D + R +A +++ + + + Q+ G
Sbjct: 272 LGMDEQDLRIARLAEREGRAVIIAFNKWDAVEDR--AACRRKLDDV----LTASLAQLKG 325
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+ VV SA+ GRG +M V T ++W R+PT LNRW + RH+ + + K+
Sbjct: 326 VEVVTLSAMTGRGVERLMPAVRQTVERWNRRIPTGELNRWFEAALARHAPPLANGRRIKL 385
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+Y T KARPPT F + L + R+L S ++ FD+ G+P+R+ R
Sbjct: 386 RYATMPKARPPTIAIFGPRAEDLPEDYRRYLVNSFRDAFDMPGVPVRVNAR 436
>gi|383486666|ref|YP_005404346.1| GTP-binding protein Der [Rickettsia prowazekii str. GvV257]
gi|383500737|ref|YP_005414097.1| GTP-binding protein Der [Rickettsia prowazekii str. RpGvF24]
gi|380757031|gb|AFE52268.1| GTP-binding protein Der [Rickettsia prowazekii str. GvV257]
gi|380758434|gb|AFE53670.1| GTP-binding protein Der [Rickettsia prowazekii str. RpGvF24]
Length = 447
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 255/469 (54%), Gaps = 53/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
++ +R G T + + FM+D +SG+ P D + ++RK+ I+ +N
Sbjct: 63 -ENPDNMGERLMGQTTQAILEADLICFMVDGKSGVLPDDKLLSNFVRKYNKHC--ILVVN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--RPSVEDYMLRVLN 300
KCE + E LGF + ISAE G+G+ +LY+A+ + SVE+ + R +
Sbjct: 120 KCEKAFD-------FDKEYYKLGFDSIVIISAEHGIGLIDLYDAIISKLSVEESIERNIA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + LQ+ + GRPN GKST +NA++ ++R+L GPEAG+TR
Sbjct: 173 DPFRGD-----------------CLQIVVSGRPNAGKSTFINAIINDERLLTGPEAGITR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS---LSVMQSRKNLMRAHVVALVLDA-E 416
+S+ V ++Y+ + L+DTAG R+K AS LS + ++ A+ V L++DA
Sbjct: 216 ESIEVDWQYKNNHIKLIDTAGL--RKKSTITASLEKLSTSDTINSIKFANTVILMIDALA 273
Query: 417 EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
V+ V EGR ++++VNK DL+ + A K +I T +PQ+ G+
Sbjct: 274 HVKQQDFNIASHIVNEGRSIIIVVNKWDLVKESEKEAFQKEFY----YQINTHLPQIKGV 329
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
PV+F SA+ + V+ + Y+ W ++ TS+LN+WL H Q + +I
Sbjct: 330 PVLFISAINKQNIEQVLDACLKIYKIWNKKITTSKLNKWLDFTTKIHPLPLQKCGRRVRI 389
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
KY TQ+K RPPTF F + ++D+ R+L ++++ FD+ GIPIR T
Sbjct: 390 KYMTQIKTRPPTFKLFSNNPGKITDSYTRYLVNNMRDAFDMHGIPIRFT 438
>gi|431805512|ref|YP_007232413.1| LOW QUALITY PROTEIN: GTP-binding protein EngA [Liberibacter
crescens BT-1]
gi|430799487|gb|AGA64158.1| LOW QUALITY PROTEIN: GTP-binding protein EngA [Liberibacter
crescens BT-1]
Length = 457
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 261/467 (55%), Gaps = 34/467 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PNVGKS LFNRL+ ++ ALV + P+ +TRD R G+ K+GD+ F ++D+AGLE
Sbjct: 5 IAIVGSPNVGKSTLFNRLVGKKLALVGDVPN--LTRDRRYGVTKIGDVNFNIIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-AM 241
E+ +++ R T L + A+F++D + G+ P D V + L K KPI+
Sbjct: 62 ESKPKTLIRRMCKQTEIALHEADLALFVVDCKVGVTPYDRTVAQMLHKKN---KPIILVY 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E+ + S E+ LGFG + ISAE G G+ +L++A+ + + + N
Sbjct: 119 NKAEAFFSENNSY-----EAFSLGFGKAVVISAEHGKGIFDLHDAILEEINNNK-HLTNK 172
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+T D T E KL L++A+VGRPNVGKSTL+N L EDR+L G EAG+TRD
Sbjct: 173 IFAIPRHNTDDKTLHA--EEKL-LRIAVVGRPNVGKSTLINHFLGEDRLLTGDEAGITRD 229
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ + + ++ +V + DTAG ++ + + LS+ S K + + VV +VLDA
Sbjct: 230 SINIEWNWKNYSVQIFDTAGIRRQSRITEKIEKLSIEDSLKAIRSSEVVVVVLDATNEIE 289
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
++ R A+ EG+ V+ NK D++ R+ + A+ Q++ + Q GI ++
Sbjct: 290 RQDFRIITSALSEGKATVLAFNKWDVIQNREERFM------ALHQKVMNTLFQAQGIHII 343
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPK-IKYFT 529
S+ G G +M +I++ W + TS+LN WL ++ S + + +KY T
Sbjct: 344 TISSKTGEGLDQLMQSIINSKDLWNKHISTSQLNNWLNMTQEKNPPPSVSGRRRHLKYIT 403
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
QVK+RPP+F+ F + + + +R+L ++ DF+L GIPIRI R
Sbjct: 404 QVKSRPPSFIIFCTCNVDIPKSYVRYLINRMRIDFNLPGIPIRIHFR 450
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ +AIVG PNVGKSTL N L+ + LVG LTRD + ++DTAG
Sbjct: 1 MTFMIAIVGSPNVGKSTLFNRLVGKKLALVGDVPNLTRDRRYGVTKIGDVNFNIIDTAG- 59
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L+ K K Q+ L A + V+D +
Sbjct: 60 LEESKPKTLIRRMCKQTEIALHEADLALFVVDCK 93
>gi|91205027|ref|YP_537382.1| GTP-binding protein EngA [Rickettsia bellii RML369-C]
gi|122426010|sp|Q1RK21.1|DER_RICBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91068571|gb|ABE04293.1| GTP-binding protein [Rickettsia bellii RML369-C]
Length = 452
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 244/463 (52%), Gaps = 47/463 (10%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
++GRPNVGKS LFNRL R++A+V++ P VTRD + ++G F ++D+ GLE
Sbjct: 13 LVGRPNVGKSTLFNRLSMRKKAIVHDLP--GVTRDRKYTDGRIGSFEFSLIDTPGLEENP 70
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAMNK 243
S R T + + FM+D RSG+ P D + ++RK+ KP ++ +NK
Sbjct: 71 DSFG--KRLMEQTTKAINEADLICFMVDSRSGILPDDKLLSDFVRKYN---KPAVLVINK 125
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSC 303
CE + E LGF +AISAE G GM +LY+ + +
Sbjct: 126 CEKAFD-------FDKEYYKLGFDSMVAISAEHGTGMIDLYDEIIAKL------------ 166
Query: 304 TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 363
+ +S+ ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+S+
Sbjct: 167 PEEDSAEAEIHDPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRESI 223
Query: 364 RVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE----- 417
+ ++Y+G + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 224 EIDWQYKGNHIKLIDTAGLRKKATITESLEKLSASDAINSIKFANTVILMIDALSPLKQQ 283
Query: 418 -----VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
EGR +V++VNK DL+ + A KE +I T +PQV G+P +F
Sbjct: 284 DLNIASHVANEGRSIVIVVNKWDLIKESEKEAF----KEEFYYQINTTLPQVKGVPALFI 339
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYFTQ 530
SA + V+ I Y+ W ++ TS+LN WL H Q + ++KY TQ
Sbjct: 340 SAKNKQNIADVLDSCIKIYKTWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRVKYMTQ 399
Query: 531 VKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 400 TKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 442
>gi|67458640|ref|YP_246264.1| GTP-binding protein EngA [Rickettsia felis URRWXCal2]
gi|75536894|sp|Q4UMV9.1|DER_RICFE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|67004173|gb|AAY61099.1| Conserved GTP-binding protein [Rickettsia felis URRWXCal2]
Length = 447
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 249/466 (53%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTEGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D +G ++RK+ KP I+ +
Sbjct: 63 -ENPDSMGERLIEQTTKAILEADLICFMVDGRSGILPDDKLLGSFVRKYN---KPAILIV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMVAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKRDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDAINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV G+PV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGVPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ GIPIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGIPIRFT 438
>gi|383501379|ref|YP_005414738.1| GTP-binding protein Der [Rickettsia australis str. Cutlack]
gi|378932390|gb|AFC70895.1| GTP-binding protein Der [Rickettsia australis str. Cutlack]
Length = 447
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 251/466 (53%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P +TRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--ITRDRKYTDGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ R T + + FM+D RSG+ P D +G ++RK+ KP I+ +
Sbjct: 63 -ENHDSMGARLMEQTTKAILEADLICFMVDGRSGILPDDKLLGSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMVAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIGTNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ + + Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWHYKNNHIKLIDTAGLRKKSTITESLEKLSASDAINSIKFANTVILMIDALAPLK 276
Query: 416 -EEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++ V EGRG+V++VNK DL+ + A +E +I T +PQV G+PV+
Sbjct: 277 QQDLNIARHVVNEGRGIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGVPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ GIPIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGIPIRFT 438
>gi|374319629|ref|YP_005066128.1| GTP-binding protein [Rickettsia slovaca 13-B]
gi|383751671|ref|YP_005426772.1| GTP-binding protein Der [Rickettsia slovaca str. D-CWPP]
gi|360042178|gb|AEV92560.1| GTP-binding protein [Rickettsia slovaca 13-B]
gi|379774685|gb|AFD20041.1| GTP-binding protein Der [Rickettsia slovaca str. D-CWPP]
Length = 447
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 249/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++T P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIKTNITDPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR LV++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSLVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ+K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQIKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|383488920|ref|YP_005406598.1| GTP-binding protein Der [Rickettsia prowazekii str. Katsinyian]
gi|380761799|gb|AFE50320.1| GTP-binding protein Der [Rickettsia prowazekii str. Katsinyian]
Length = 447
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 255/469 (54%), Gaps = 53/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
++ +R G T + + FM+D +SG+ P D + ++RK+ I+ +N
Sbjct: 63 -ENPDNMGERLMGQTTQAILEADLICFMVDGKSGVLPDDKLLSNFVRKYNKHC--ILVVN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--RPSVEDYMLRVLN 300
KCE + E LGF + ISAE G+G+ +LY+A+ + SVE+ + R +
Sbjct: 120 KCEKAFD-------FDKEYYKLGFDSIVIISAEHGIGLIDLYDAIISKLSVEESIERNIA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + LQ+ + GRPN GKST +NA++ ++R+L GPEAG+TR
Sbjct: 173 DPFRGD-----------------CLQIVVSGRPNAGKSTFINAIINDERLLTGPEAGITR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS---LSVMQSRKNLMRAHVVALVLDA-E 416
+S+ V ++Y+ + L+DTAG R+K AS LS + ++ A+ V L++DA
Sbjct: 216 ESIEVDWQYKNTHIKLIDTAGL--RKKSTITASLEKLSTSDTINSIKFANTVILMIDALA 273
Query: 417 EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
V+ V EGR ++++VNK DL+ + A K +I T +PQ+ G+
Sbjct: 274 HVKQQDFNIASHIVNEGRSIIIVVNKWDLVKESEKEAFQKEFY----YQINTHLPQIKGV 329
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
PV+F SA+ + V+ + Y+ W ++ T++LN+WL H Q + +I
Sbjct: 330 PVLFISAINKQNIEQVLDACLKIYKIWNKKITTNKLNKWLDFTTKIHPLPLQKCDRRVRI 389
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
KY TQ+K RPPTF F + ++D+ R+L ++++ FD+ GIPIR T
Sbjct: 390 KYMTQIKTRPPTFKLFSNNPGKITDSYTRYLVNNMRDAFDMHGIPIRFT 438
>gi|15604520|ref|NP_221038.1| GTP-binding protein EngA [Rickettsia prowazekii str. Madrid E]
gi|383488075|ref|YP_005405754.1| GTP-binding protein Der [Rickettsia prowazekii str. Chernikova]
gi|383489760|ref|YP_005407437.1| GTP-binding protein Der [Rickettsia prowazekii str. Dachau]
gi|383499900|ref|YP_005413261.1| GTP-binding protein Der [Rickettsia prowazekii str. BuV67-CWPP]
gi|386082544|ref|YP_005999122.1| GTP-binding protein [Rickettsia prowazekii str. Rp22]
gi|8928120|sp|Q9ZCP6.1|DER_RICPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|3861214|emb|CAA15114.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292572309|gb|ADE30224.1| GTP-binding protein [Rickettsia prowazekii str. Rp22]
gi|380760954|gb|AFE49476.1| GTP-binding protein Der [Rickettsia prowazekii str. Chernikova]
gi|380762646|gb|AFE51166.1| GTP-binding protein Der [Rickettsia prowazekii str. BuV67-CWPP]
gi|380763483|gb|AFE52002.1| GTP-binding protein Der [Rickettsia prowazekii str. Dachau]
Length = 447
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 255/469 (54%), Gaps = 53/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
++ +R G T + + FM+D +SG+ P D + ++RK+ I+ +N
Sbjct: 63 -ENPDNMGERLMGQTTQAILEADLICFMVDGKSGVLPDDKLLSNFVRKYNKHC--ILVVN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--RPSVEDYMLRVLN 300
KCE + E LGF + ISAE G+G+ +LY+A+ + SVE+ + R +
Sbjct: 120 KCEKAFD-------FDKEYYKLGFDSIVIISAEHGIGLIDLYDAIISKLSVEESIERNIA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + LQ+ + GRPN GKST +NA++ ++R+L GPEAG+TR
Sbjct: 173 DPFRGD-----------------CLQIVVSGRPNAGKSTFINAIINDERLLTGPEAGITR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS---LSVMQSRKNLMRAHVVALVLDA-E 416
+S+ V ++Y+ + L+DTAG R+K AS LS + ++ A+ V L++DA
Sbjct: 216 ESIEVDWQYKNTHIKLIDTAGL--RKKSTITASLEKLSTSDTINSIKFANTVILMIDALA 273
Query: 417 EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
V+ V EGR ++++VNK DL+ + A K +I T +PQ+ G+
Sbjct: 274 HVKQQDFNIASHIVNEGRSIIIVVNKWDLVKESEKEAFQKEFY----YQINTHLPQIKGV 329
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
PV+F SA+ + V+ + Y+ W ++ T++LN+WL H Q + +I
Sbjct: 330 PVLFISAINKQNIEQVLDACLKIYKIWNKKITTNKLNKWLDFTTKIHPLPLQKCGRRVRI 389
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
KY TQ+K RPPTF F + ++D+ R+L ++++ FD+ GIPIR T
Sbjct: 390 KYMTQIKTRPPTFKLFSNNPGKITDSYTRYLVNNMRDAFDMHGIPIRFT 438
>gi|157827640|ref|YP_001496704.1| GTP-binding protein EngA [Rickettsia bellii OSU 85-389]
gi|166225850|sp|A8GXR7.1|DER_RICB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157802944|gb|ABV79667.1| GTP-binding protein EngA [Rickettsia bellii OSU 85-389]
Length = 452
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 243/463 (52%), Gaps = 47/463 (10%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
++GRPNVGKS LFNRL R++A+V++ P VTRD + ++G F ++D+ G E
Sbjct: 13 LVGRPNVGKSTLFNRLSMRKKAIVHDLP--GVTRDRKYTDGRIGSFEFSLIDTPGFE--E 68
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAMNK 243
S R T + + FM+D RSG+ P D + ++RK+ KP ++ +NK
Sbjct: 69 NPDSFGKRLMEQTTKAINEADLICFMVDSRSGILPDDKLLSDFVRKYN---KPAVLVINK 125
Query: 244 CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSC 303
CE + E LGF +AISAE G GM +LY+ + +
Sbjct: 126 CEKAFD-------FDKEYYKLGFDSMVAISAEHGTGMIDLYDEIIAKL------------ 166
Query: 304 TQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSV 363
+ +S+ ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+S+
Sbjct: 167 PEEDSAEAEIHDPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRESI 223
Query: 364 RVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE----- 417
+ ++Y+G + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 224 EIDWQYKGNHIKLIDTAGLRKKATITESLEKLSASDAINSIKFANTVILMIDALSPLKQQ 283
Query: 418 -----VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
EGR +V++VNK DL+ + A KE +I T +PQV G+P +F
Sbjct: 284 DLNIASHVANEGRSIVIVVNKWDLIKESEKEAF----KEEFYYQINTTLPQVKGVPALFI 339
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYFTQ 530
SA + V+ I Y+ W ++ TS+LN WL H Q + ++KY TQ
Sbjct: 340 SAKNKQNIADVLDSCIKIYKTWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRVKYMTQ 399
Query: 531 VKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 400 TKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 442
>gi|340776773|ref|ZP_08696716.1| GTP-binding protein Der [Acetobacter aceti NBRC 14818]
Length = 502
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 258/496 (52%), Gaps = 55/496 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV+I GRPNVGKS L+NRL RR ALV + P VTRD +EG A + +++D+AG
Sbjct: 12 LPTVVIAGRPNVGKSTLYNRLTGRRNALVADFPG--VTRDRKEGEALMRGRTIRLIDTAG 69
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
LE EA S+ R +A + + +F ID R+G+ P D WLR+ ++ ++
Sbjct: 70 LE-EAAPDSLFGRMQNSSALAVQQADLILFCIDARAGITPADQHFATWLRRQNRKV--LL 126
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPSV---- 291
NK E A +A E+ LG G PI ISAE G G MTE+ +AL +
Sbjct: 127 VANKAEGRAG-----AASAMEAFSLGLGTPIGISAEHGEGISDLMTEIVDALPQGILPPV 181
Query: 292 -----------------EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGR 332
E L + ++ +DE++ P L++A VGR
Sbjct: 182 AEEKPVKKKEKPKAPVEETVSFATLTGEADEIPEEFEEEAVFIEDETEEPGVLKIAFVGR 241
Query: 333 PNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGP 391
PN GKSTL+N LL E+R++ GPE GLTRDS+ V + V +VDTAG ++ + E+
Sbjct: 242 PNAGKSTLMNRLLGEERMITGPEPGLTRDSIAVLLRDEHGEVQIVDTAGLRKKARVEEHL 301
Query: 392 ASLSVMQSRKNLMRAHVVALVLDA---------EEVRAVE-EGRGLVVIVNKMDLLSGRQ 441
+S + + L RA VV LV+DA + R +E EGR V+ +NK D + R
Sbjct: 302 EKMSTSATIEALKRAEVVVLVIDATLGLHEQDLQIARLIEREGRACVLALNKWDAVEDRT 361
Query: 442 NSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTS 501
+ ++A+ +QT + Q+ GI VV S G G ++ V + W R+PT
Sbjct: 362 AT------RQAIYDRLQTSLAQMKGIEVVSFSGKTGAGVQKLLPAVRHAAEIWNSRVPTG 415
Query: 502 RLNRWLRKVMGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSL 560
LNRW ++ RH+ Q + K++Y TQVK+RPPTF+ F + + L D R+L L
Sbjct: 416 ELNRWFDMMLERHAPPLVQGRRLKLRYITQVKSRPPTFLVFGTRAEQLPDDYKRYLVNGL 475
Query: 561 KEDFDLGGIPIRITQR 576
+E F L G+PIR+ R
Sbjct: 476 RETFGLTGVPIRLQLR 491
>gi|165933610|ref|YP_001650399.1| GTP-binding protein Der [Rickettsia rickettsii str. Iowa]
gi|378723054|ref|YP_005287940.1| GTP-binding protein Der [Rickettsia rickettsii str. Arizona]
gi|378724408|ref|YP_005289292.1| GTP-binding protein Der [Rickettsia rickettsii str. Hauke]
gi|379018193|ref|YP_005294428.1| GTP-binding protein Der [Rickettsia rickettsii str. Hino]
gi|379019506|ref|YP_005295740.1| GTP-binding protein Der [Rickettsia rickettsii str. Hlp#2]
gi|379712773|ref|YP_005301112.1| GTP-binding protein Der [Rickettsia philipii str. 364D]
gi|189037156|sp|B0BUT3.1|DER_RICRO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|165908697|gb|ABY72993.1| GTP-binding protein [Rickettsia rickettsii str. Iowa]
gi|376328078|gb|AFB25316.1| GTP-binding protein Der [Rickettsia rickettsii str. Arizona]
gi|376329418|gb|AFB26655.1| GTP-binding protein Der [Rickettsia philipii str. 364D]
gi|376330759|gb|AFB27995.1| GTP-binding protein Der [Rickettsia rickettsii str. Hino]
gi|376332086|gb|AFB29320.1| GTP-binding protein Der [Rickettsia rickettsii str. Hlp#2]
gi|376333423|gb|AFB30656.1| GTP-binding protein Der [Rickettsia rickettsii str. Hauke]
Length = 447
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 247/466 (53%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLDE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 HPNSMG--ERLIEQTTKAILEADLICFMVDARSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKLANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRFT 438
>gi|383312983|ref|YP_005365784.1| GTP-binding protein Der [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378931643|gb|AFC70152.1| GTP-binding protein Der [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 447
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 253/466 (54%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDCKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTIKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPTILLV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKLP--------- 162
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++T+P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 163 ---EEESIETNITNPIKGDC---LQIVVSGRPNTGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKPTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++ V EGR +V++VNK DL+ A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASYVVNEGRSIVIVVNKWDLVKESAKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ--SAQPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q S + +IKY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTKAHLLPLQKGSRRVRIKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYNRYLVNNMREAFDMPGVPIRFT 438
>gi|379023205|ref|YP_005299866.1| GTP-binding protein Der [Rickettsia canadensis str. CA410]
gi|376324143|gb|AFB21384.1| GTP-binding protein Der [Rickettsia canadensis str. CA410]
Length = 447
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 246/464 (53%), Gaps = 47/464 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V+N P VTRD + K+G F ++D+ GLE
Sbjct: 6 IALVGRPNVGKSTLFNRLSIRKKAIVHNLPG--VTRDRKYTDGKIGSCEFLLIDTPGLEE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S S+ R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 NPNSMSV--RLMEQTTKAILEADLICFMVDCRSGILPDDKLLSSFIRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYQLGFDSMVAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + +Q+ I GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PKEESIETNIADPVKGDC---VQIVISGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE--- 417
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLDKLSASDAINSIKFANTVILIIDALSPLK 276
Query: 418 -------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
EGR +V++VNK DL+ + A +E +I T +PQ+ G+ V+
Sbjct: 277 QQDLNIASYVANEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQIKGVSVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + +IKY
Sbjct: 333 FISAINKQNIEQVLDACLTIYKNWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRIKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
TQ+K RPPTF F + + ++++ R+L +++E FD+ GIPIR
Sbjct: 393 TQIKTRPPTFKLFSNNPEKITNSYTRYLVNNMREAFDMPGIPIR 436
>gi|402703175|ref|ZP_10851154.1| GTP-binding protein Der [Rickettsia helvetica C9P9]
Length = 447
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 248/466 (53%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+ F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKISSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D +G ++RK+ KP I+ +
Sbjct: 63 -ENPDSMGERLMAQTTKAILEADLICFMVDGRSGILPDDKLLGSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMVAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDAINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV G+PV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGVPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRFT 438
>gi|157804058|ref|YP_001492607.1| GTP-binding protein EngA [Rickettsia canadensis str. McKiel]
gi|166225851|sp|A8EZN9.1|DER_RICCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157785321|gb|ABV73822.1| GTP-binding protein EngA [Rickettsia canadensis str. McKiel]
Length = 447
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 246/464 (53%), Gaps = 47/464 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V+N P VTRD + K+G F ++D+ GLE
Sbjct: 6 IALVGRPNVGKSTLFNRLSIRKKAIVHNLPG--VTRDRKYTDGKIGSCEFLLIDTPGLEE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S S+ R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 NPNSMSV--RLMEQTTKAILEADLICFMVDCRSGILPDDKLLSSFIRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYQLGFDSMVAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + +Q+ I GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PKEKSIETNIADPVKGDC---VQIVISGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE--- 417
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLDKLSASDAINSIKFANTVILIIDALSPLK 276
Query: 418 -------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
EGR +V++VNK DL+ + A +E +I T +PQ+ G+ V+
Sbjct: 277 QQDLNIASYVANEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQIKGVSVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + +IKY
Sbjct: 333 FISAINKQNIEQVLDACLTIYKNWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRIKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
TQ+K RPPTF F + + ++++ R+L +++E FD+ GIPIR
Sbjct: 393 TQIKTRPPTFKLFSNNPEKITNSYTRYLVNNMREAFDMPGIPIR 436
>gi|87198885|ref|YP_496142.1| GTP-binding protein EngA [Novosphingobium aromaticivorans DSM
12444]
gi|123490336|sp|Q2GA15.1|DER_NOVAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|87134566|gb|ABD25308.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans
DSM 12444]
Length = 461
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 256/476 (53%), Gaps = 43/476 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V+IIGRPNVGKS LFNRL+ ++ ALV + P VTRD R G A L L F ++D+AG
Sbjct: 3 PQVIIIGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDRRFGDASLLGLDFTIVDTAGW 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E S ++ R T L A+F+ID R+G+ PLD E+ ++LR+ PIV
Sbjct: 61 EDEDPS-TLPGRMRKQTEASLVGADVALFVIDARAGVTPLDEEIARYLRQST---VPIVL 116
Query: 241 M-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
M NK E G E+ LGFG+P+A SAE G G+ +L+EAL P + +
Sbjct: 117 MANKAEGRAGDPGIF-----EAFSLGFGEPVAFSAEHGQGLADLFEALLPLIGEKQDDED 171
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + + L+LAIVGRPN GKSTL+N LL EDR+L GPEAG+T
Sbjct: 172 GEGEEAEDEEEEFDPESV-------LKLAIVGRPNAGKSTLINKLLGEDRLLTGPEAGIT 224
Query: 360 RDSVRVHFEY------QGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALV 412
RDS+ + +++ R V L+DTAG ++ + LSV +R + A VV LV
Sbjct: 225 RDSIAIDWQWFDPEREAYRPVRLIDTAGMRKKAQVTDKLEKLSVADARHAIDFAEVVVLV 284
Query: 413 LDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA ++++ +EEGR L++ +NK D+ S L++ +++A+ + +
Sbjct: 285 LDATRGLEHQDLKIASMVIEEGRALMIAINKWDV--AEDPSGLFQGIRKALDEGLA---- 338
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
QV G+P++ S G+G ++ + W R+PT+ LNRW + + +
Sbjct: 339 QVRGVPLLAISGRTGKGLDELLKAAFEIRAAWSKRVPTAALNRWFDDALAANPPPAPGGR 398
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP FV F + L ++ R+L ++ + +PIR+T RS
Sbjct: 399 RIKLRYITQAKTRPPGFVLFGTRLDQLPESYRRYLINGIRRELGFDAVPIRLTLRS 454
>gi|341616013|ref|ZP_08702882.1| GTP-binding protein Der [Citromicrobium sp. JLT1363]
Length = 465
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 251/479 (52%), Gaps = 51/479 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V+IIGRPNVGKS LFNRL+ +R ALV + P VTRD R G L +RF V+D+A
Sbjct: 1 MLPRVIIIGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDRRFGDVTLAGMRFTVVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + S ++ R T + +F++D R+G+ PLD E+ WLR + I
Sbjct: 59 GWEDDDPS-TLPGRMRMQTEVSIEDADAVLFVVDARAGVTPLDSEIANWLR--GADVPVI 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE------ 292
+ NK E G ++ LG G+P+ ISAE G G +L+EAL P +
Sbjct: 116 LVANKAEGRSGDAGIF-----DAYSLGLGEPLGISAEHGEGTADLFEALWPIIGEKSEAG 170
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D +L + + PL+LAIVGRPN GKSTL+N LL EDR+L
Sbjct: 171 DALLAIDEGEDEDEDGVPTG-----------PLKLAIVGRPNAGKSTLINRLLGEDRLLT 219
Query: 353 GPEAGLTRDSVRVHFEY------QGRTVYLVDTAGWL-QREKEKGPASLSVMQSRKNLMR 405
GPEAG+TRDS+ + +E+ R + L+DTAG +R + LSV +R+ +
Sbjct: 220 GPEAGITRDSIAIDWEWTDPQSGDTREIRLIDTAGMRKKRNVVEKLEKLSVADARRAVDF 279
Query: 406 AHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A VV L+LDA + A+EEGR L++ +NK D+ + + S LY ++ A+ +
Sbjct: 280 AEVVVLMLDATQGLEHQDLKIASLALEEGRALMIAINKWDVAA--EPSKLYNGIRFALDE 337
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
+ QV G+PV+ SA G+G A++ + + W R+ TS LNRW + +
Sbjct: 338 GLA----QVRGLPVIAVSAKTGKGLDALLTAAFELREAWSRRVSTSALNRWFDHALEANP 393
Query: 516 WKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K++Y TQ RPP FV F + L + R+L ++ + G +P+R+
Sbjct: 394 PPAPGGKRIKLRYITQAGTRPPRFVVFGTRLDMLPTSYERYLVNGIRRELGFGAVPVRV 452
>gi|157828884|ref|YP_001495126.1| GTP-binding protein EngA [Rickettsia rickettsii str. 'Sheila
Smith']
gi|378721706|ref|YP_005286593.1| GTP-binding protein Der [Rickettsia rickettsii str. Colombia]
gi|379016047|ref|YP_005292282.1| GTP-binding protein Der [Rickettsia rickettsii str. Brazil]
gi|166225852|sp|A8GT93.1|DER_RICRS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157801365|gb|ABV76618.1| GTP-binding protein EngA [Rickettsia rickettsii str. 'Sheila
Smith']
gi|376324571|gb|AFB21811.1| GTP-binding protein Der [Rickettsia rickettsii str. Brazil]
gi|376326730|gb|AFB23969.1| GTP-binding protein Der [Rickettsia rickettsii str. Colombia]
Length = 447
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 246/466 (52%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLDE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 HPNSMG--KRLIEQTTKAILEADLICFMVDARSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKLANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRFT 438
>gi|341584218|ref|YP_004764709.1| GTP-binding protein Der [Rickettsia heilongjiangensis 054]
gi|340808443|gb|AEK75031.1| GTP-binding protein Der [Rickettsia heilongjiangensis 054]
Length = 447
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 247/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDVPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTTKAILEADLICFMVDSRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|157826088|ref|YP_001493808.1| GTP-binding protein EngA [Rickettsia akari str. Hartford]
gi|166225849|sp|A8GPH5.1|DER_RICAH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157800046|gb|ABV75300.1| GTP-binding protein EngA [Rickettsia akari str. Hartford]
Length = 447
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 247/466 (53%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P +TRD + K+G F ++D+ GLE
Sbjct: 6 IALVGRPNVGKSTLFNRLSIRKKAIVHDLPG--ITRDRKYTDGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ R T + + FM+D RSG+ P D +G ++RK+ KP I+ +
Sbjct: 63 -ENHDSMGARLMEQTTKAILEADLICFMVDGRSGILPNDKLLGSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF + ISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMVTISAEHGTGLIDLYDEIITKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDY---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + + Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWHYKNNHIKLIDTAGLRKKSTITESLEKLSASDAINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGRG+V++VNK DL+ + A +E +I T +PQV G+PV+
Sbjct: 277 QQDLNIASHVVNEGRGIVIVVNKWDLVKESKKEAF----QEEFYYQINTHLPQVKGVPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDSCLKIYKIWNKKIATSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ K RPPTF F + + ++D+ R+L ++++ FD+ GIPIR T
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMRDAFDMPGIPIRFT 438
>gi|229587033|ref|YP_002845534.1| GTP-binding protein EngA [Rickettsia africae ESF-5]
gi|259645884|sp|C3PPD1.1|DER_RICAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|228022083|gb|ACP53791.1| GTP-binding protein [Rickettsia africae ESF-5]
Length = 447
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 246/465 (52%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLDE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 HPNSMG--ERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIKTNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ K LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITKSLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|239947026|ref|ZP_04698779.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921302|gb|EER21326.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 447
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 246/466 (52%), Gaps = 47/466 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSTRKKAIVHDLPG--VTRDRKYTEGKIGSFEFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ ++ T + + FM+D RSG+ P D +G ++RK+ KP I+ +
Sbjct: 63 -ENPDSMGEKLMEQTTKAILEADLICFMVDGRSGILPDDKLLGSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMVAISAEHGTGLINLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALVPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV G+PV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGVPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGKRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
Q K RPPTF F + ++D+ R+L +++E FD+ GIPIR T
Sbjct: 393 AQTKTRPPTFKLFSNNPGKITDSYTRYLVNNMREAFDMPGIPIRFT 438
>gi|350273804|ref|YP_004885117.1| GTP-binding protein engA [Rickettsia japonica YH]
gi|348593017|dbj|BAK96978.1| GTP-binding protein engA [Rickettsia japonica YH]
Length = 447
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 246/465 (52%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ +IGRPNVGKS LFNRL R +A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLIGRPNVGKSTLFNRLSIRTKAIVHDVPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTTKAILEADLICFMVDSRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|238650994|ref|YP_002916850.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic]
gi|259645885|sp|C4K2K1.1|DER_RICPU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238625092|gb|ACR47798.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic]
Length = 447
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 247/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTKAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ GIPIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGIPIRF 437
>gi|157964826|ref|YP_001499650.1| GTP-binding protein EngA [Rickettsia massiliae MTU5]
gi|157844602|gb|ABV85103.1| GTP-binding protein [Rickettsia massiliae MTU5]
Length = 483
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 248/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 42 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 98
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 99 -ENPNSMGERLMEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 154
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + + ++ +
Sbjct: 155 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEI-------IAKLPEE 200
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ N + P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 201 EAIETN-----IADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 252
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 253 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 312
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 313 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 368
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 369 FISAINKQNIAQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 428
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + ++D+ R+L +++E FD+ G+PIR
Sbjct: 429 TQTKTRPPTFKLFSNNPAKITDSYTRYLVNNMREAFDMPGVPIRF 473
>gi|383484359|ref|YP_005393272.1| GTP-binding protein Der [Rickettsia parkeri str. Portsmouth]
gi|378936713|gb|AFC75213.1| GTP-binding protein Der [Rickettsia parkeri str. Portsmouth]
Length = 447
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 247/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIKTNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|15892953|ref|NP_360667.1| GTP-binding protein EngA [Rickettsia conorii str. Malish 7]
gi|24636839|sp|Q92GU2.1|DER_RICCN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|15620147|gb|AAL03568.1| conserved GTP-binding protein [Rickettsia conorii str. Malish 7]
Length = 447
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 247/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIKTNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVHEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|379713525|ref|YP_005301863.1| GTP-binding protein Der [Rickettsia massiliae str. AZT80]
gi|376334171|gb|AFB31403.1| GTP-binding protein Der [Rickettsia massiliae str. AZT80]
Length = 447
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 248/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + + ++ +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMMAISAEHGTGLIDLYDEI-------IAKLPEE 164
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ N + P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 165 EAIETN-----IADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKCDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIAQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPAKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|383482542|ref|YP_005391456.1| GTP-binding protein Der [Rickettsia montanensis str. OSU 85-930]
gi|378934896|gb|AFC73397.1| GTP-binding protein Der [Rickettsia montanensis str. OSU 85-930]
Length = 447
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 245/465 (52%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ +IGRPNVGKS LFNRL R++A+V+N P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLIGRPNVGKSTLFNRLSIRKKAIVHNLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMMAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIETNIADPIKGDC---LQVVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKETF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L ++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNKMREAFDMPGVPIRF 437
>gi|34581350|ref|ZP_00142830.1| conserved GTP-binding protein [Rickettsia sibirica 246]
gi|28262735|gb|EAA26239.1| conserved GTP-binding protein [Rickettsia sibirica 246]
Length = 447
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 249/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLDE 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 64 HPNSMG--ERLIEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF IAISAE G G+ +LY+ + +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMIAISAEHGTGLIDLYDEIIAKL---------- 161
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ S ++ P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 162 --PEEESIKTNIADPIKGDC---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 416 -EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++ V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASYVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHLLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|383481921|ref|YP_005390836.1| GTP-binding protein Der [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378934260|gb|AFC72763.1| GTP-binding protein Der [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 447
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 249/465 (53%), Gaps = 47/465 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G F ++D+ GL+
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFEFLLIDTPGLD- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
S+ +R T + + FM+D RSG+ P D + ++RK+ KP I+ +
Sbjct: 63 -ENPNSMGERLMEQTTKAILEADLICFMVDGRSGILPDDKLLSSFVRKYN---KPAILVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCE + E LGF +AISAE G G+ +LY+ + + ++ +
Sbjct: 119 NKCEKAFD-------FDKEYYKLGFDSMMAISAEHGTGLIDLYDEI-------IAKLPEE 164
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ N + P + LQ+ + GRPN GKST +NAL+ ++R+L GPEAG+TR+
Sbjct: 165 EAIETN-----IADPIKGDF---LQIVVSGRPNAGKSTFINALINDERLLTGPEAGITRE 216
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE---- 416
S+ + ++Y+ + L+DTAG ++ + LS + ++ A+ V L++DA
Sbjct: 217 SIEIDWQYKNNHIKLIDTAGLRKKSTITESLEKLSASDTINSIKFANTVILMIDALAPLK 276
Query: 417 ------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
V EGR +V++VNK DL+ + A +E +I T +PQV GIPV+
Sbjct: 277 QQDLNIASHVVNEGRSIVIVVNKWDLVKESEKEAF----QEEFYYQINTHLPQVKGIPVL 332
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIKYF 528
F SA+ + V+ + Y+ W ++ TS+LN WL H Q + ++KY
Sbjct: 333 FISAINKQNIEQVLDACLKIYKIWNKKITTSKLNEWLNFTTEAHPLPLQKGGRRVRVKYM 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ K RPPTF F + + ++D+ R+L +++E FD+ G+PIR
Sbjct: 393 TQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMREAFDMPGVPIRF 437
>gi|299115668|emb|CBN75868.1| MEngA, mitochondrial EngA GTPase [Ectocarpus siliculosus]
Length = 629
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 253/480 (52%), Gaps = 41/480 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS L+NRL R A+V TP TRD +E LG + F D+ GLE
Sbjct: 116 VVIVGRPNVGKSTLYNRLATRNRAIV--TPIAGTTRDRKESTVSLGGMTFDFADTGGLED 173
Query: 183 ---EATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
E G GM VL KT+ AI FM+D R G+ D +W+RK
Sbjct: 174 GADEPWKGPPGTPHPGMPQVVLKKTEEAIEDSDIVLFMVDARQGVTEADRHYARWVRKRQ 233
Query: 233 PQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
+ + + + NK E T ++ E LGFG+P+AIS+ G GM + AL P
Sbjct: 234 GRHRGVYIVANKTEG--QLTEQMSQTLEECGRLGFGEPLAISSSHGDGMADFATALVP-- 289
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
Y + E++E++ P+QLA+VGRPNVGKS+LLNA+L+EDR L
Sbjct: 290 -HYEEWEKEQEAAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLREDRAL 348
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ---REKEKGPASLSVMQSRKNLMRAHV 408
GP GLTRD+V V + + G+ V LVDTAG + R+ L+V S + +A V
Sbjct: 349 TGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKSGSRDTTTPLEELAVKDSMNAIHKAQV 408
Query: 409 VALVLDAEE--VRAVE---------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLD E +R E EGR LVV NK D LSG K V +++
Sbjct: 409 VVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSD-LSGVSPGEYAK----GVIRQV 463
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ ++P V PV+ AL+G G ++M VI ++W R+PT+ LNRWLRK++ H
Sbjct: 464 EDLMPDVRAPPVLSVCALDGSGVGSLMRSVIKARERWRARVPTAVLNRWLRKIVFLHPPP 523
Query: 518 DQS---AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
S +KY TQVK PP F F++ +D + R++TK+L+++F G+ +R++
Sbjct: 524 RDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQ-RYITKNLQKEFGFHGMQVRLS 582
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
++ IVGRPNVGKSTL N L +R +V P AG TRD G T DT G
Sbjct: 114 FRVVIVGRPNVGKSTLYNRLATRNRAIVTPIAGTTRDRKESTVSLGGMTFDFADTGG 170
>gi|326403270|ref|YP_004283351.1| GTP-binding protein EngA [Acidiphilium multivorum AIU301]
gi|325050131|dbj|BAJ80469.1| GTP-binding protein EngA [Acidiphilium multivorum AIU301]
Length = 451
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 244/469 (52%), Gaps = 48/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I GRPNVGKS LFNRL +R ALV + P VTRD +E +L ++ +++D+AGL
Sbjct: 9 PRVAICGRPNVGKSTLFNRLAGKRIALVADEP--GVTRDRKEAWGELAGVKVQLIDTAGL 66
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E EA ++ R T + + +F+ D R+GL P D WLR+ + IV
Sbjct: 67 E-EAPPDTLPGRMRASTGTAVDEADLVLFVFDARAGLLPEDRHFAAWLRRAGKPV--IVV 123
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G + AA E+ LG G+P+A+SAE G+++L
Sbjct: 124 ANKAE----GRGG-SNAALEAYELGLGEPVAVSAEHNEGVSDLI---------------- 162
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + T +V ED++ + P+ LAIVGRPN GKSTL+N LL E RV+ GPE GLTR
Sbjct: 163 DRIIEALPETDEV---EDEDGERPMHLAIVGRPNAGKSTLMNRLLGEQRVITGPEPGLTR 219
Query: 361 DSVRVHF-EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
D++ + GR L DTAG +R + E G LS + + L A V L +DA E
Sbjct: 220 DAIAAELTDSAGRRYRLFDTAGLRRRARVEAGLEKLSTSSTIEALKFADTVVLAIDAHEG 279
Query: 418 --------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R +E EGR V+ + K DL+ R R + A+ + ++ + Q+ GI
Sbjct: 280 LHDQDFTIARLIEREGRACVIALTKWDLVEDRD------RTRRAILERMEHSLSQMKGIT 333
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
+V S G G ++ V + + W R+ TS LNRW + R + + K++Y
Sbjct: 334 LVPLSGETGEGVKKLLPAVREADRIWNTRVTTSALNRWFEGALERFPPPLVEGRRLKLRY 393
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQVKARPP+F F + + D+ R+L SL+E F L G PIR+ R
Sbjct: 394 ITQVKARPPSFAVFGTRAELTPDSYQRYLVNSLRERFGLEGTPIRLALR 442
>gi|148259762|ref|YP_001233889.1| GTP-binding protein EngA [Acidiphilium cryptum JF-5]
gi|338984050|ref|ZP_08633170.1| EngA [Acidiphilium sp. PM]
gi|146401443|gb|ABQ29970.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5]
gi|338207029|gb|EGO95046.1| EngA [Acidiphilium sp. PM]
Length = 451
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 245/469 (52%), Gaps = 48/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I GRPNVGKS LFNRL +R ALV + P VTRD +E +L ++ +++D+AGL
Sbjct: 9 PRVAICGRPNVGKSTLFNRLAGKRIALVADEP--GVTRDRKEAWGELAGVKVQLIDTAGL 66
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E EA ++ R T + + +F+ D R+GL P D WLR+ + IV
Sbjct: 67 E-EAPPDTLPGRMRASTGTAVDEADLVLFVFDARAGLLPEDRHFAAWLRRAGKPV--IVV 123
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G + AA E+ LG G+P+A+SAE G+++L D ++ L
Sbjct: 124 ANKAE----GRGG-SNAALEAYELGLGEPVAVSAEHNEGVSDLI--------DRIIEALP 170
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ ED++ + P+ LAIVGRPN GKSTL+N LL E RV+ GPE GLTR
Sbjct: 171 ET-----------DEAEDEDGERPMHLAIVGRPNAGKSTLMNRLLGEQRVITGPEPGLTR 219
Query: 361 DSVRVHF-EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
D++ + GR L DTAG +R + E G LS + + L A V L +DA E
Sbjct: 220 DAIAAELTDSAGRRYRLFDTAGLRRRARVEAGLEKLSTSSTIEALKFADTVVLAIDAHEG 279
Query: 418 --------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R +E EGR V+ + K DL+ R R + A+ + ++ + Q+ GI
Sbjct: 280 LHDQDFTIARLIEREGRACVIALTKWDLVEDRD------RTRRAILERLEHSLSQMKGIT 333
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
+V S G G ++ V + + W R+ TS LNRW + R + + K++Y
Sbjct: 334 LVPLSGETGEGVKKLLPAVREADRIWNTRVTTSALNRWFEGALERFPPPLVEGRRLKLRY 393
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQVKARPP+F F + + D+ R+L SL+E F L G PIR+ R
Sbjct: 394 ITQVKARPPSFAVFGTRAELTPDSYQRYLVNSLRERFGLEGTPIRLALR 442
>gi|189183414|ref|YP_001937199.1| GTP-binding protein EngA [Orientia tsutsugamushi str. Ikeda]
gi|238692236|sp|B3CR58.1|DER_ORITI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189180185|dbj|BAG39965.1| GTP-binding protein, Era/Obg family [Orientia tsutsugamushi str.
Ikeda]
Length = 454
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 255/469 (54%), Gaps = 46/469 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKL-GDLRFKVLDSAGLE 181
V ++G+PNVGKS LFNRL R +++V++ P +TRD + A L DL V+D+ GLE
Sbjct: 6 VALVGKPNVGKSTLFNRLSLREKSIVHDLPG--ITRDRKYAKANLFSDL--IVVDTPGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A +GS+ + + + F++D +G+ P+D E +RKH Q I+ +
Sbjct: 62 F-AAAGSLEFNMMQQSLVAINEAHIICFVVDAITGILPIDEECANLIRKHNKQSSTILVI 120
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E S LGF + + ISA+ G G+ EL D + +L++
Sbjct: 121 NKTEKPIILDKSY-------YKLGFSESVCISAKHGQGIYEL--------GDIIQNILSE 165
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
N +T + T E ++ + L+LAIVGRPN GKST +NA+L EDRVL GP++GLTR+
Sbjct: 166 DKKINFLTTTN-TKCEYNQQRPELELAIVGRPNCGKSTFINAILNEDRVLTGPQSGLTRN 224
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS---LSVMQSRKNLMRAHVVALVLDAEE- 417
SV + +EY G + LVDTAG R+K S LSV + K + A++V +++DA
Sbjct: 225 SVEIDWEYYGHLIRLVDTAG--VRKKNAVTQSCELLSVNDTFKTIRFANIVVVMIDATRG 282
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
AV EGRG+V++VNK DL+ + K ++ + + I + Q+ GI
Sbjct: 283 LEQQDLSIISYAVNEGRGIVLVVNKWDLIKKK------KEFQKELSRLIAYSVFQIKGIN 336
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS--AQPKIK 526
++ SA E +V+ Q + TY W R+ T LN+WL K M QS + KIK
Sbjct: 337 PIYISAKEKFNLESVLQQCVLTYASWQKRVTTGTLNQWLAKAMSNSPLPFQSHGKRVKIK 396
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL-GGIPIRIT 574
Y TQ KARPPT F + +++ ++ R+L + K +FD+ G+P+R++
Sbjct: 397 YCTQTKARPPTIKLFCNNIESIDESYKRYLINNFKLNFDIAAGVPVRLS 445
>gi|148284571|ref|YP_001248661.1| GTP-binding protein EngA [Orientia tsutsugamushi str. Boryong]
gi|229784136|sp|A5CDT2.1|DER_ORITB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146740010|emb|CAM80087.1| GTP-binding protein [Orientia tsutsugamushi str. Boryong]
Length = 454
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 255/474 (53%), Gaps = 56/474 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKL-GDLRFKVLDSAGLE 181
V ++G+PNVGKS LFNRL R +++V++ P +TRD + A L DL V+D+ GLE
Sbjct: 6 VALVGKPNVGKSTLFNRLSLREKSIVHDLPG--ITRDRKYAKANLFSDLI--VVDTPGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A +GS+ + + + F++D +G+ P+D E +RKH Q I+ +
Sbjct: 62 F-AAAGSLEFNMMQQSLVAINEANIICFVVDAITGILPIDEECANLIRKHNKQSSTILVI 120
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLN 300
NK E S LGF + I ISA+ G G+ EL + ++ + ED + VL
Sbjct: 121 NKTEKPIILDKSY-------YKLGFSESICISAKHGQGIYELGDIIQNILSEDKKINVLT 173
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T N + PE LQLAIVGRPN GKST +NA+L E+RVL GPE+GLTR
Sbjct: 174 ---TTNTKCEYNQQCPE-------LQLAIVGRPNCGKSTFINAILNEERVLTGPESGLTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS---LSVMQSRKNLMRAHVVALVLDAEE 417
+SV V ++Y G+ + LVDTAG R+K S LSV + K + A++V +++DA
Sbjct: 224 NSVEVDWKYCGQLIRLVDTAGV--RKKNAVTQSCELLSVNDTFKTIRFANIVIVMIDATR 281
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP----Q 463
AV EGRG+V++VNK DL+ + KE +E+ ++ Q
Sbjct: 282 GLEQQDLSIISYAVNEGRGIVLVVNKCDLI----------KKKEEFQKELNRLVAYSVFQ 331
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS--A 521
+ GI ++ SA E +V+ + + TY W R+ T LN+WL K M QS
Sbjct: 332 IKGINPIYISAKEKFNLESVLQKCVLTYASWQKRVTTGTLNQWLAKAMSNRPLPFQSHGK 391
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL-GGIPIRIT 574
+ KIKY TQ KARPPT F + +++ ++ R+L + K +FD+ G+P+R++
Sbjct: 392 RVKIKYCTQTKARPPTIKLFCNNIESIDESYKRYLINNFKLNFDIAAGVPVRLS 445
>gi|51473858|ref|YP_067615.1| GTP-binding protein EngA [Rickettsia typhi str. Wilmington]
gi|383752632|ref|YP_005427732.1| GTP-binding protein Der [Rickettsia typhi str. TH1527]
gi|383843468|ref|YP_005423971.1| GTP-binding protein Der [Rickettsia typhi str. B9991CWPP]
gi|81692277|sp|Q68W59.1|DER_RICTY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|51460170|gb|AAU04133.1| probable GTP-binding protein EngA [Rickettsia typhi str.
Wilmington]
gi|380759275|gb|AFE54510.1| GTP-binding protein Der [Rickettsia typhi str. TH1527]
gi|380760115|gb|AFE55349.1| GTP-binding protein Der [Rickettsia typhi str. B9991CWPP]
Length = 447
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 247/473 (52%), Gaps = 61/473 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GRPNVGKS LFNRL R++A+V++ P VTRD + K+G +F ++D+ GLE
Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKKAIVHDLPG--VTRDRKYTDGKIGSFKFLLIDTPGLE- 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
++ R T + + M+D RSG+ P D + ++RK+ I+ +N
Sbjct: 63 -ENPDNMGKRLMEQTTQAILEADLICLMVDGRSGVLPDDKLLSSFVRKYNKHC--ILVVN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE------ALRPSVEDYML 296
KCE + E LGF + ISAE G G+ +LY+ +++ S+E +
Sbjct: 120 KCEKAFD-------FDKEYYKLGFDSIVIISAEHGTGLIDLYDEIIAKLSIKESIERNIA 172
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
C LQ+ + GRPN GKST +NA++ ++R+L GPEA
Sbjct: 173 DPFRGDC---------------------LQIVVSGRPNAGKSTFINAIINDERLLTGPEA 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AHVVALVL 413
G+TR+S+ + ++Y+ + L+DTAG R+K ASL + + + A+ V L++
Sbjct: 212 GITRESIEIDWQYKNTHIKLIDTAGL--RKKSTITASLEKLSTSDTINAIKFANTVILMI 269
Query: 414 DA------EEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++ + EGR ++++VNK DL+ + A + +I T +PQ
Sbjct: 270 DALAHLKQQDLNIANHIINEGRSIIIVVNKWDLVEESEKEAF----QAEFYYQINTHLPQ 325
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-- 521
+ G+PV+F SA+ + V+ + Y+ W ++ T +LN WL H+ Q
Sbjct: 326 IKGVPVLFISAINKQNIEQVLDACLKIYKIWNKKITTGKLNEWLNFTTKVHTLPLQKCGR 385
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+ +IKY TQ K RPPTF F + + ++D+ R+L ++++ FD+ GIPIR T
Sbjct: 386 RVRIKYMTQTKTRPPTFKLFSNNPEKITDSYTRYLVNNMRDTFDMHGIPIRFT 438
>gi|300176539|emb|CBK24204.2| GTP binding protein [Blastocystis hominis]
Length = 607
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 250/504 (49%), Gaps = 69/504 (13%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
+V ++GR NVGKS LFNRL+ RR+ALV + + TRD REG + L F ++D+ G
Sbjct: 90 SVALVGRTNVGKSTLFNRLVGRRDALV--SKEAGTTRDRREGKGHISGLEFTLIDTGGYV 147
Query: 182 TEATSGSILDRTAG-MTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + S++++ T + K F++D + G+ D + + P
Sbjct: 148 PENKNISLIEQQINKQTEYAVEKADVLFFLLDGKVGVTNEDRAIASY---------PFPL 198
Query: 241 MNKCESLH---NGTGS-LAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP------- 289
+ H NG +E LG G+P+ +SAE G G+ +L+E L+P
Sbjct: 199 FTEGIFSHTDDNGNCPPWEELKSEVYQLGLGEPVGVSAEHGEGLLDLFEVLQPFGDLINL 258
Query: 290 ----------------------SVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQL 327
S + Y +R D + S + T DDE LQL
Sbjct: 259 NKAAERERYAKILEAREAKASRSRQGYRVRTNVDMVESSEPSNEKNTRDLDDEI---LQL 315
Query: 328 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK 387
I+G PN GKSTLLN LL+ DR + G GLTRD+V E+ R + +VDT G + +
Sbjct: 316 TILGIPNSGKSTLLNTLLKTDRFITGSIPGLTRDTVSTEIEFHNRRIRVVDTPGIPKADG 375
Query: 388 EKGPA--SLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMD 435
P+ SLSV + K L +HVVAL+LD + +++GRGL VI+NK D
Sbjct: 376 VLPPSLNSLSVFHAHKQLDYSHVVALILDGSRLLTKHDLALAKEVLDKGRGLFVILNKSD 435
Query: 436 LLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWC 495
++ Q+ A K+ + Q + +PQ +P + SAL GRG AV +D + +W
Sbjct: 436 VM---QSPAA---AKKQLVQYMDRFVPQAGHVPSIVVSALYGRGTDAVFPLALDVFDRWR 489
Query: 496 LRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAEL 553
R+ T LNRWL + RH + K+KY TQ KARPP+FV F + K+ L L
Sbjct: 490 TRISTGILNRWLDAISFRHPPPRTKSGKEVKLKYITQTKARPPSFVLFCNVKE-LDATYL 548
Query: 554 RFLTKSLKEDFDLGGIPIRITQRS 577
R+L L+E+F+L G+P+RI R+
Sbjct: 549 RYLCSCLREEFNLNGVPVRIFVRA 572
>gi|348687393|gb|EGZ27207.1| hypothetical protein PHYSODRAFT_308593 [Phytophthora sojae]
Length = 534
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 253/473 (53%), Gaps = 42/473 (8%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ ++GR NVGKS LFNRL + R A+V+N P TRD R A L L V+D+ GL
Sbjct: 44 IALVGRTNVGKSTLFNRLTKTRSAIVHNVPG--TTRDRRYARATLAGLELDVVDTGGL-A 100
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+A SG++ T + + F++D R G+ +D +WLR+ + + N
Sbjct: 101 DAPSGTLEQGMLEQTRRAVHEADLVFFLVDGRQGVTHVDTHFARWLRRENTKAPVHLVAN 160
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY-MLRVLND 301
K E + LG G I +SAE G G+T L + + P E + L+ + +
Sbjct: 161 KLEG---DPARWESELNDCYQLGMGGAIPLSAEHGEGLTLLLDEIIPEYEKFEKLKEMKE 217
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ + Q EDD+ + ++LAIVGRPNVGKSTLLN +++ DRVL GPE
Sbjct: 218 AQLKQEEGEQQQEEEEDDDPRT-IKLAIVGRPNVGKSTLLNKIVRNDRVLTGPEY----- 271
Query: 362 SVRVHFEYQGRTVYLVDTAG---WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
V + + GR + LVDTAG + +R+ + +LSV + + + A VV +V+D E
Sbjct: 272 ---VPWTFHGRPIKLVDTAGIRRYSKRDHDDQIENLSVRDAFRAIDSAQVVVVVVDMSEP 328
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR LV+ NK DL +G +R+++ E+Q + QV G+
Sbjct: 329 KLIHMDLTIAQRVIEEGRALVLAANKSDL-AGANVELEMQRIQD----ELQDSLAQVRGV 383
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH----SWKDQSAQP 523
PVV SAL G G ++ +V+ Y+KW LR+ T RLNRWL K M RH + K ++
Sbjct: 384 PVVPISALTGNGIKKLVPEVLKAYEKWDLRVTTGRLNRWL-KAMARHHPPPTVKGKTLN- 441
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+KY TQVK+RPPTF F+S + +A RFL L+E+FD+ G+P R+ R
Sbjct: 442 -VKYATQVKSRPPTFAVFVSKPSDVPEAYQRFLLSQLREEFDMVGVPARLLLR 493
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++A+VGR NVGKSTL N L + +V G TRD G + +VDT G
Sbjct: 42 LRIALVGRTNVGKSTLFNRLTKTRSAIVHNVPGTTRDRRYARATLAGLELDVVDTGGLA- 100
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAEE 417
+ G ++ Q+R+ + A +V ++D +
Sbjct: 101 -DAPSGTLEQGMLEQTRRAVHEADLVFFLVDGRQ 133
>gi|94986202|ref|YP_605566.1| GTP-binding protein EngA [Deinococcus geothermalis DSM 11300]
gi|166198711|sp|Q1IWI7.1|DER_DEIGD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94556483|gb|ABF46397.1| Small GTP-binding protein domain [Deinococcus geothermalis DSM
11300]
Length = 441
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 247/465 (53%), Gaps = 54/465 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS+LFNRL+ RREA+V + P VTRD +EGL + R ++D+ G
Sbjct: 1 MQKVAIVGRPNVGKSSLFNRLVGRREAVVADFPG--VTRDAKEGLMLYHNHRIVLVDTGG 58
Query: 180 LETEATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L SG ++ A + Q IF++D R GL D EV WLR+ + I
Sbjct: 59 L----WSGDEWEQAIREKAEWAMEGAQAVIFVVDPREGLTAADYEVADWLRRLGKPV--I 112
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
VA NK +S + AE LGFGDP+AISAE G+ +L E + M +
Sbjct: 113 VAANKIDSPKHDV-----YLAELWGLGFGDPVAISAEHARGLDDLMERV-------MAHL 160
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D ED P++++++GRPNVGKS+LLNA+ Q +R +V + G
Sbjct: 161 PADE--------------EDVPEVAPIRISLIGRPNVGKSSLLNAITQSERAIVADQPGT 206
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRDS+ V + Y G+ LVDTAG ++++ + ++ +S + R+ ++ LV++A E+
Sbjct: 207 TRDSLDVEWNYGGQRFVLVDTAG-IRKKPDTAIEEYAIQRSEAAIERSDIIWLVVNATEI 265
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A + G+ ++V+VNK DL+ + AL + K E+ + + P
Sbjct: 266 GDHELKLANLAYDSGKPVIVVVNKWDLVP---DEALKQTEK-----ELNQKLHHIAYAPR 317
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V+TSA+ G ++ + + Y+KW R+PT+ LNRWL R + + +P K+ +
Sbjct: 318 VYTSAINDYGIHDMLAEAMKLYEKWQSRIPTAELNRWLEIWQMRQAVPNFHGKPLKMYFM 377
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQV+ PPTF F + ++ A FL ++ED L GIP+R+
Sbjct: 378 TQVETAPPTFAIFCNRADFVTRAYEGFLQNRIREDLGLAGIPVRL 422
>gi|15807299|ref|NP_296029.1| GTP-binding protein EngA [Deinococcus radiodurans R1]
gi|26006746|sp|Q9RS19.1|DER_DEIRA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|6460115|gb|AAF11852.1|AE002062_5 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 438
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 252/480 (52%), Gaps = 61/480 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS+LFNRLI RREA+V + P VTRD +EGL + R ++D+ GL
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRREAVVADFPG--VTRDAKEGLMLYHNHRITLIDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG ++ A + Q IF++D R GL D EV WLR+ + IV
Sbjct: 60 --WSGDEWEQAIREKAEWAMEGAQAVIFVLDPREGLSAADYEVADWLRRLGKPV--IVTA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK +S + AE LGFGDP+AISAE G+ +D M RV+
Sbjct: 116 NKIDSQKHEP-----YLAELWGLGFGDPVAISAEHARGL-----------DDLMDRVMK- 158
Query: 302 SCTQNNSSTQDVTSPEDDESK---LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
PEDDE P++++++GRPNVGKS+LLNA+ Q DR +V G
Sbjct: 159 ------------YLPEDDEDVPDIAPIRISLIGRPNVGKSSLLNAITQSDRAIVADLPGT 206
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRDS+ V ++Y G+ LVDTAG ++++ + ++ +S+ + R+ V+ LV++A ++
Sbjct: 207 TRDSLDVEWDYGGQRFVLVDTAG-IRKKPDTAIEDFAIQRSQAAIERSDVIWLVVNATDI 265
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A + G+ ++V+VNK DL+ A K ++ + Q++ ++ P
Sbjct: 266 GDHELKLANLAYDSGKPVIVVVNKWDLVP----DAELKSTEKDLNQKLH----HISFAPR 317
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIKYF- 528
V+TSA+ G ++ + + Y+KW R+ TS LNRWL + + +P YF
Sbjct: 318 VYTSAINDYGIHDMLAEAMKLYEKWQSRIGTSELNRWLEVWQMKQRVPNFHGKPLRMYFM 377
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV-PRKCGSSSS 587
TQV+ PPTF F + ++ A FL ++ED +L G+P+R+ + P K G +
Sbjct: 378 TQVETAPPTFAIFCNRADFVTRAYEGFLQNRIREDLELAGVPVRLKWKEKGPYKKGEADE 437
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 25/126 (19%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++AIVGRPNVGKS+L N L+ +V G+TRD+ Y + L+DT G
Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRREAVVADFPGVTRDAKEGLMLYHNHRITLIDTGGLWSG 62
Query: 382 --WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVV 429
W Q +EK ++ Q+ V VLD E + + G+ ++V
Sbjct: 63 DEWEQAIREKAEWAMEGAQA---------VIFVLDPREGLSAADYEVADWLRRLGKPVIV 113
Query: 430 IVNKMD 435
NK+D
Sbjct: 114 TANKID 119
>gi|68171706|ref|ZP_00545063.1| Small GTP-binding protein domain:GTP-binding [Ehrlichia chaffeensis
str. Sapulpa]
gi|88657837|ref|YP_507319.1| GTP-binding protein EngA [Ehrlichia chaffeensis str. Arkansas]
gi|67998875|gb|EAM85570.1| Small GTP-binding protein domain:GTP-binding [Ehrlichia chaffeensis
str. Sapulpa]
gi|88599294|gb|ABD44763.1| GTP-binding protein EngA [Ehrlichia chaffeensis str. Arkansas]
Length = 442
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 256/469 (54%), Gaps = 64/469 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PNVGKS +FNRL ++ A+V N P+ +TRD REG A L L+FK++D+ G++
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPN--LTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
S++ ++ + ++ F++D R ++E K+LRK KPI+ +
Sbjct: 62 TIKLSSLVLDQVKLS---IEESDIIFFVVDARIEHDDKNIEFAKYLRKKVK--KPIILIA 116
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGD---PIAISAETGLGMTELYEALRPSVEDYMLRV 298
NKCES LG+ D P+ ISAE LG+ +LYEAL P +++Y L
Sbjct: 117 NKCES--------QKRCYSIDYLGYFDFIGPVYISAEHNLGLVDLYEALLPFIKEYDLNT 168
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+ N ++L+IVGRPN GKST +N LL E+R++V PE G
Sbjct: 169 LD---LHN------------------IKLSIVGRPNAGKSTFINRLLAENRMIVSPEPGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDA 415
TRDS+ V + Y+G+ L+DTAG R+K K S+ SV ++ +++ R+ +V L++D+
Sbjct: 208 TRDSIDVEYTYRGQKFTLIDTAG--MRKKAKVTESIEVTSVHKTIESINRSDIVILMIDS 265
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++ A+++G+ +++ +NK D+++ + S L K + +
Sbjct: 266 VYGIEQQDLSIAELAIQKGKAIIIALNKWDMIAKKDRSELLKDICNYNKLNFK------- 318
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
+PV+ SAL+ ++ I+ Y+ +R+ TS LN+WL+ + H + + K
Sbjct: 319 -VPVIEVSALKNINCNKIIETSIELYKCLTMRISTSVLNKWLKLAVEYHKPPLCNGKVVK 377
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
IKY TQVK PPTF+A ++G ++ ++L SL++ F + GIPIR+
Sbjct: 378 IKYITQVKVIPPTFIAVVNGSYSIDLTYRQYLMSSLRKHFSIDGIPIRL 426
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PNVGKST+ N L + +V LTRD + G +VDT G
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGV-- 59
Query: 385 REKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ +SL + Q + ++ + ++ V+DA
Sbjct: 60 -DNTIKLSSLVLDQVKLSIEESDIIFFVVDA 89
>gi|386855524|ref|YP_006259701.1| GTP-binding protein engA [Deinococcus gobiensis I-0]
gi|379999053|gb|AFD24243.1| GTP-binding protein engA [Deinococcus gobiensis I-0]
Length = 441
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 252/471 (53%), Gaps = 66/471 (14%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS+LFNRLI RREA+V + P VTRD +EGL + R ++D+ G
Sbjct: 1 MQKVAIVGRPNVGKSSLFNRLIGRREAVVADFPG--VTRDAKEGLMLYHNHRISLIDTGG 58
Query: 180 LETEATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L SG ++ A + Q IF++D R GL D EV +WLR+ + I
Sbjct: 59 L----WSGDEWEQAIREKAEWAMEGAQAVIFVLDPREGLSAADYEVAEWLRRLGKPV--I 112
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NK +S + AE LGFG+P+AISAE G+ L M RV
Sbjct: 113 VVANKIDSQKHEV-----YLAELWGLGFGEPVAISAEHARGLDTL-----------MDRV 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ T T ED P++++++GRPNVGKS+LLNA+ Q +R +V + G
Sbjct: 157 M----------THLPTDDEDVPEIAPIRISLIGRPNVGKSSLLNAITQSERSIVADQPGT 206
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRDS+ V ++Y G+ LVDTAG ++++ + ++ +S+ + R+ ++ LV++A ++
Sbjct: 207 TRDSLDVEWDYGGQRFVLVDTAG-IRKKPDTAIEDYAIQRSQAAIARSDLIWLVVNAGDL 265
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+ ++V+VNK DL+ + KR ++ + Q++ ++ P
Sbjct: 266 GDHELKLANLAYESGKPVIVVVNKWDLVPDTE----LKRAEKDLNQKLHHIMYA----PK 317
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP------ 523
V+TSA+ G ++ + + ++KW R+PTS LNRWL W+ + A P
Sbjct: 318 VYTSAINEYGIHDMLAEAMKLHEKWQSRIPTSELNRWL------EVWQMRQAVPNFHGKK 371
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K+ + TQV+ PPTF F + + ++ A FL ++ED L GIP+R+
Sbjct: 372 LKMYFMTQVETAPPTFAIFCNRAEFVTRAYEGFLQNRIREDLALAGIPVRL 422
>gi|218673078|ref|ZP_03522747.1| GTP-binding protein EngA [Rhizobium etli GR56]
Length = 393
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 236/406 (58%), Gaps = 39/406 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ +
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIGKDRAYAKD 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ +N + +D P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DVAVTDVDIPPDENEADGED-EEPIYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLREKTDR----LL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
PQ GI V S G G +M +IDT + W R+ T+RLNRWL
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWL 390
>gi|218679763|ref|ZP_03527660.1| GTP-binding protein EngA [Rhizobium etli CIAT 894]
Length = 437
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 242/442 (54%), Gaps = 36/442 (8%)
Query: 156 VTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRS 215
+TRD R G A+L L F ++D+AGLE EA S+ R T + + ++F++D ++
Sbjct: 1 MTRDRRPGDARLMGLTFTIIDTAGLE-EADEESLQGRMRAQTEAAIDEADLSLFVVDAKN 59
Query: 216 GLHPLDLEVGKWLRKHAPQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISA 274
GL P+D + + LR+ KP+V + NK E+ + +G ++ LG G+P ISA
Sbjct: 60 GLTPVDTALAEMLRRRG---KPVVLVANKSEARGSDSGFY-----DAYTLGLGEPTPISA 111
Query: 275 ETGLGMTELYEALRPSVEDYMLRVLNDSCTQN-------NSSTQDVTSPEDDESKLPLQL 327
E G GM +L +A+ ++ D + + + P D++K PL++
Sbjct: 112 EHGQGMLDLRDAIVEAIGKDRAYAKEDVAVTDVDIPHAADEGEDEDEEPAYDDTK-PLRV 170
Query: 328 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK 387
AIVGRPN GKSTL+N L EDR+L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ +
Sbjct: 171 AIVGRPNAGKSTLINRFLGEDRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAR 230
Query: 388 -EKGPASLSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVIVNKMDL 436
+ LSV + + + A V +V DA ++++ V+ EGR V+ NK D+
Sbjct: 231 VTEKLEKLSVADALRAIRFAETVVIVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDM 290
Query: 437 LSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCL 496
+ RQ A+ ++E + ++PQ GI V S G G +M +IDT + W
Sbjct: 291 IEDRQ--AVLADLRE----KTDRLLPQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNK 344
Query: 497 RLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRF 555
R+ T+RLNRWL +H S + K+KY TQVKARPP F+ + L ++ R+
Sbjct: 345 RISTARLNRWLETQQIQHPPPAVSGRRIKLKYMTQVKARPPAFMISCTRSDALPESYTRY 404
Query: 556 LTKSLKEDFDLGGIPIRITQRS 577
L L+ DFD+ +PIRI RS
Sbjct: 405 LINGLRADFDMPSVPIRIHFRS 426
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR---FKVLDSAG 179
V I+GRPN GKS L NR + E + P+ +TRD ++ D R K+ D+AG
Sbjct: 170 VAIVGRPNAGKSTLINRFL--GEDRLLTGPEAGITRD---SISVEWDWRGRTIKMFDTAG 224
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ +A L++ + A+ L +FA + + D DL++ + +
Sbjct: 225 MRRKARVTEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLVLREGR--A 280
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLML-----GFGDPIAISAETGLGMTELYEAL 287
++A NK + + + LA ++ L G + IS +TG G+ +L +++
Sbjct: 281 AVLAFNKWDMIEDRQAVLADLREKTDRLLPQARGIR-AVPISGQTGWGLDKLMQSI 335
>gi|226357377|ref|YP_002787117.1| GTP-binding protein EngA [Deinococcus deserti VCD115]
gi|259645869|sp|C1D094.1|DER_DEIDV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226319367|gb|ACO47363.1| putative GTP-binding protein [Deinococcus deserti VCD115]
Length = 441
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 248/467 (53%), Gaps = 64/467 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS+LFNRLI RREA+V + P VTRD +EGL + R ++D+ GL +
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRREAVVADFPG--VTRDAKEGLMLYHNHRITLVDTGGLWS 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ + A + Q +F++D R GL D EV WLR+ + IV N
Sbjct: 62 GDEWEAAIREKAEWA---MEGAQAVVFVLDPREGLSAADYEVADWLRRVGKPV--IVVAN 116
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K +S + AE LGFGDP+AISAE G+ EL L+
Sbjct: 117 KIDSPKHEV-----YLAELWGLGFGDPVAISAEHARGLDEL---------------LDRV 156
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
T + +DV PE P++++++GRPNVGKS+LLNA+ DR +V + G TRDS
Sbjct: 157 MTHLPADDEDV--PE----VAPIRISLIGRPNVGKSSLLNAITNTDRAIVADQPGTTRDS 210
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV---- 418
+ V +++ G+ LVDTAG ++++ + ++ +S+ + R+ ++ LV++A ++
Sbjct: 211 LDVEWDFGGQRFVLVDTAG-IRKKPDTAIEDYAIQRSQAAIQRSDLIWLVVNATDMGDHE 269
Query: 419 -----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTS 473
A E G+ ++V+VNK DL+ + KR ++ + Q++ ++ P V+TS
Sbjct: 270 LKLANLAYESGKPVIVVVNKWDLVPDEE----LKRTEKDLNQKLH----HISFAPRVYTS 321
Query: 474 ALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-------KIK 526
A+ G ++ + + + KW R+PTS LNRWL W+ + A P K+
Sbjct: 322 AINDYGIHEMLAEAMKLHDKWQSRIPTSELNRWL------EVWQMRQAVPNFHGKKLKMY 375
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ TQV+ PPTF F + ++ A +L ++ED L G+P+R+
Sbjct: 376 FMTQVETAPPTFAIFCNRADFVTRAYEGYLQNRIREDLQLAGVPVRL 422
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG-WLQ 384
++AIVGRPNVGKS+L N L+ +V G+TRD+ Y + LVDT G W
Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRREAVVADFPGVTRDAKEGLMLYHNHRITLVDTGGLWSG 62
Query: 385 REKEKGPASLSVMQSRKNLMR-AHVVALVLDAEEVRAVEE----------GRGLVVIVNK 433
E E ++ + + M A V VLD E + + G+ ++V+ NK
Sbjct: 63 DEWEA-----AIREKAEWAMEGAQAVVFVLDPREGLSAADYEVADWLRRVGKPVIVVANK 117
Query: 434 MD 435
+D
Sbjct: 118 ID 119
>gi|428219482|ref|YP_007103947.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
gi|427991264|gb|AFY71519.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
Length = 454
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 250/486 (51%), Gaps = 55/486 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKSA NRL +++A+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIVGRPNVGKSAFVNRLAGQQDAIVYDQPG--VTRDRTYRRAFWRDHEFNVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L E + + L R + A ++++Q IFM+D + GL D ++ WLR+ I +
Sbjct: 61 LVFEDNTEFLPLIRQQALLA--ISQSQAVIFMVDGQDGLTAADEQIADWLRQQ--NIPIL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
VA+NKCES G AAE LG G+P IS G G EL + L
Sbjct: 117 VAVNKCESPDLGLSQ----AAEFWELGIGEPFPISGIHGNGTGELLDIL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q+ + + VT ED+ +++AI+GRPNVGKS+LLNA L E R +V P AG
Sbjct: 162 -----VQHLPAPETVTEAEDE-----IKIAIIGRPNVGKSSLLNAFLGEQRSIVSPIAGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGW-LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ R L+DTAG +R GP + ++ K + R+ VV +V+DA E
Sbjct: 212 TRDAIDTQVIRGDRKYRLIDTAGIRRKRSVNYGPEFFGINRAFKAINRSDVVLMVIDALE 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
RAVEEGRG +++VNK D + + + +Y+ +++++ + +
Sbjct: 272 GVTDQDQKLAHRAVEEGRGCIIVVNKWDAVEDKDSYTIYEYT-----EKVRSQLYFLDYA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
P++F SAL G+ ++ QV ++ R+ TS +N + + HS Q Q +I
Sbjct: 327 PLIFVSALTGQRVAKILDQVDIAAEQHVRRVTTSVINEIIEDAVAWHSPPTSRQGKQGRI 386
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRSVPR 580
Y TQV ++PPT V F++ K +D R++ + +E G P+R+ QR V R
Sbjct: 387 YYGTQVSSQPPTIVLFVNDPKRFNDNYRRYIERQFRESLGFTGTPLRLIWRGKNQREVER 446
Query: 581 KCGSSS 586
++
Sbjct: 447 SLNRAT 452
>gi|325283649|ref|YP_004256190.1| GTP-binding protein engA [Deinococcus proteolyticus MRP]
gi|324315458|gb|ADY26573.1| GTP-binding protein engA [Deinococcus proteolyticus MRP]
Length = 441
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 257/480 (53%), Gaps = 55/480 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS+LFNRLI RREA+V + P VTRD +E + + R ++D+ GL +
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRREAVVADFP--GVTRDAKEEIMLYHNHRITLVDTGGLWS 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+++ A L IF++D R GL D EV WLR+ + +V N
Sbjct: 62 GDEWEAVIREKAEWA---LEGADAVIFVLDPRDGLSAADYEVADWLRRLGRPV--VVVAN 116
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K +S + AE LGFG+P+AISAE G+ +D M R++
Sbjct: 117 KIDSPKHEP-----YLAELWALGFGEPVAISAEHARGL-----------DDLMDRIM--- 157
Query: 303 CTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ + + E D S++ P++++++GRPNVGKS+LLNA+ Q DR +V G TRD
Sbjct: 158 --------EHLPADEGDVSEVAPIRISLIGRPNVGKSSLLNAITQSDRAIVADVPGTTRD 209
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
S+ V ++Y G+ LVDTAG ++++ + ++ +S+ + R+ ++ LVL+A+++
Sbjct: 210 SLDVEWDYGGQRFVLVDTAG-IRKKPDTAIEDYAIQRSQAAIERSDLIWLVLNADDLGDH 268
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A + G+ ++V+VNK DL+ KR ++ + Q++ + P V+T
Sbjct: 269 ELKLANLAYDSGKPVIVVVNKWDLVPDED----LKRAEKELDQKLF----HIAYAPRVYT 320
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
SA+ G ++ + + Y KW R+PT+ LNRWL +H+ + +P K+ + TQV
Sbjct: 321 SAINDYGIHDMLAEAMKLYDKWQSRVPTAELNRWLEIWQMKHAVPNFGGRPLKMYFMTQV 380
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV-PRKCGSSSSRQN 590
+ PPTF F + ++ + F+ +++D DL GIP+R+ + P K G + +
Sbjct: 381 ETAPPTFAIFCNRADYVTRSYEGFIQNRIRDDLDLAGIPVRLKWKEKGPYKKGRKGQQAD 440
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG-WLQ 384
++AIVGRPNVGKS+L N L+ +V G+TRD+ Y + LVDT G W
Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRREAVVADFPGVTRDAKEEIMLYHNHRITLVDTGGLWSG 62
Query: 385 REKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKM 434
E E ++ ++ L A V VLD + + + GR +VV+ NK+
Sbjct: 63 DEWE----AVIREKAEWALEGADAVIFVLDPRDGLSAADYEVADWLRRLGRPVVVVANKI 118
Query: 435 D 435
D
Sbjct: 119 D 119
>gi|56416911|ref|YP_153985.1| GTP-binding protein EngA [Anaplasma marginale str. St. Maries]
gi|222475278|ref|YP_002563694.1| GTP-binding protein EngA [Anaplasma marginale str. Florida]
gi|254995098|ref|ZP_05277288.1| GTP-binding protein EngA [Anaplasma marginale str. Mississippi]
gi|255003264|ref|ZP_05278228.1| GTP-binding protein EngA [Anaplasma marginale str. Puerto Rico]
gi|255004391|ref|ZP_05279192.1| GTP-binding protein EngA [Anaplasma marginale str. Virginia]
gi|56388143|gb|AAV86730.1| GTP-binding protein [Anaplasma marginale str. St. Maries]
gi|222419415|gb|ACM49438.1| GTP-binding protein (engA) [Anaplasma marginale str. Florida]
Length = 438
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 245/471 (52%), Gaps = 56/471 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+G PNVGKS +FNRL+R + A+V N HVTRD +EG+A L+F +D+ G
Sbjct: 1 MQKVAIVGLPNVGKSTIFNRLVRSKSAIVSNVA--HVTRDRKEGVANFCGLQFVAIDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ +++ + L T +F++D + G D + KWLRK P KP++
Sbjct: 59 VGAGTGMQALVTEQVELA---LECTDVVLFVVDAKKGTDAEDTDFAKWLRKRTP--KPVI 113
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NKCES N + +L + L F P+ ISAE LGM +LYE + P E
Sbjct: 114 LVVNKCES--NKSCALID---DMEYLDFLGPVYISAEHNLGMPDLYEVMSPLFEG----- 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ P + + ++I+G+PNVGKST +N++L E RV+ AG
Sbjct: 164 ------------EHRQKPREK----AITISIIGQPNVGKSTFMNSILGEKRVITDGTAGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRDS+ + Y+G + L DTAG +R K + LS+ + + R+ VV L++D
Sbjct: 208 TRDSISAEYCYKGVRLLLTDTAGIRKRAKVTENMEKLSIKSATDAISRSSVVVLMVDFTL 267
Query: 417 ---------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A+ EG+G+VV++NK DL+ K V+E + Q I+ +
Sbjct: 268 GINQQDLFIADTAIREGKGIVVVLNKSDLIDD-------KAVEEEILQAIRRHSRVDFDV 320
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++ SAL G G V+ + I+ ++ R+ T++LNRWL + H+ Q+ + ++K
Sbjct: 321 PIMKISALRGTGCSKVLDRAIELHKSASSRISTAQLNRWLNVALEHHAPHLQNNRKVRLK 380
Query: 527 YFTQVKARPPTFVAFLSGKKT-LSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV A PPTFV +S T + D+ L++L S +F + G+PIR+ R
Sbjct: 381 YITQVSALPPTFV--VSANTTHIEDSYLQYLKNSFIRNFSMQGVPIRLIIR 429
>gi|429219495|ref|YP_007181139.1| ribosome-associated GTPase EngA [Deinococcus peraridilitoris DSM
19664]
gi|429130358|gb|AFZ67373.1| ribosome-associated GTPase EngA [Deinococcus peraridilitoris DSM
19664]
Length = 444
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 256/487 (52%), Gaps = 61/487 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS+LFNRLI RREA+V + P VTRD++EG+ + R ++D+ GL +
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRREAVVADFP--GVTRDVKEGVMLYENHRIVLMDTGGLWS 61
Query: 183 -EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ I ++ + LA IF+ D R GL D EV WLR+ + ++
Sbjct: 62 GDEWEAPIREKAEMAMEDALA----VIFVCDPREGLSAADYEVADWLRRL--NLPVVLVA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK +SL + AE LGFG+P+ +SAE G+ +D M RV++
Sbjct: 116 NKIDSLKHDV-----YLAELWGLGFGEPLPVSAEHARGL-----------DDLMDRVVS- 158
Query: 302 SCTQNNSSTQDVTSPEDDESK---LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
PEDDE P++++++GRPNVGKS+LLNA+ +RV+V + G
Sbjct: 159 ------------HLPEDDEDVSEIAPIRISLIGRPNVGKSSLLNAITGSERVIVADQPGT 206
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRDSV V F+Y G+ LVDTAG +++ + ++M+S + R+ ++ LV++A E+
Sbjct: 207 TRDSVDVDFDYAGQRFVLVDTAG-IRKRPDSAIEEYAMMRSEAAIKRSDIIWLVVNAGEL 265
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A + G+ ++V+VNK DL+ + KR +++ + + P
Sbjct: 266 GDHELKLANLAYDSGKPVIVVVNKWDLVPDEE----IKRTT----RDLDIKLNHIHFAPR 317
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
+TSA+ G ++ + + Y KW R+ T+ LNR L + + + +P K+ +
Sbjct: 318 AYTSAINDYGIHDMLAEAMKLYAKWQSRIATADLNRMLEIWQVKQRVPNFNGKPLKMYFM 377
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV-PRKCGSSSS 587
TQV+ PP FV F + ++ A FL ++ED DL GIP+++T R P K S +
Sbjct: 378 TQVETAPPNFVIFCNRADFVTRAYENFLLNRIREDLDLPGIPVKLTWREKGPYKGKKSKT 437
Query: 588 RQNTGQK 594
++ QK
Sbjct: 438 KEEEVQK 444
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR 385
++AIVGRPNVGKS+L N L+ +V G+TRD Y+ + L+DT G
Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRREAVVADFPGVTRDVKEGVMLYENHRIVLMDTGGLWSG 62
Query: 386 EKEKGP 391
++ + P
Sbjct: 63 DEWEAP 68
>gi|58617258|ref|YP_196457.1| GTP-binding protein EngA [Ehrlichia ruminantium str. Gardel]
gi|58416870|emb|CAI27983.1| Probable GTP-binding protein engA [Ehrlichia ruminantium str.
Gardel]
Length = 439
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 249/469 (53%), Gaps = 62/469 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+G PNVGKS +FNRL+++R A+V N P+ +TRD REG A L L+FKV+D+ G++
Sbjct: 4 VAIVGLPNVGKSTIFNRLVKKRSAIVSNVPN--LTRDRREGSADLCGLKFKVIDTGGVDY 61
Query: 183 EAT-SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
S ILD+ + F++D R ++E K+LRK+ KPI+ +
Sbjct: 62 RIKLSVLILDQVKL----AIEACDVIFFVVDARVERDIKNIEFAKYLRKNTQ--KPIILI 115
Query: 242 -NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NKCES + + L F PI ISAE LGM +LY+AL P + +
Sbjct: 116 ANKCESRK------KCSEVDYLEYFNFIGPIYISAEHNLGMVDLYDALIPFIPE------ 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
S+ +++TS ++++IVGRPN GKST +N L+ EDR++V E G T
Sbjct: 164 --------SNVENLTSSY-------IKISIVGRPNAGKSTFVNRLVGEDRMIVSSEPGTT 208
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDAEEV 418
RD+V + +EYQG+ L+DTAG ++ K L SV +S +++ R+ +V L++D+ V
Sbjct: 209 RDAVDIEYEYQGQKFILIDTAGMRKKAKITENIELTSVYKSIESINRSDIVILMIDS--V 266
Query: 419 RAVEE------------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
++E+ G+ +++ +NK D++S L + ++
Sbjct: 267 YSIEQQDLSIAELIIQKGKAIIIALNKWDVISKEHRLGLLRDIRNYNKLSFD-------- 318
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SAL+ V+ + I+ Y+ +R+ T LN+WLR + H + + K+
Sbjct: 319 VPIIEISALKNINCNMVLEKSIELYKYLTMRISTPMLNKWLRFAVDHHRPPLFNGKTVKL 378
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
KY TQ+K PPTF ++G + ++L SL++ F + GIPIR+
Sbjct: 379 KYITQIKVMPPTFAIVINGLYGIDLTYQQYLMNSLRKYFSIDGIPIRMN 427
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PNVGKST+ N L+++ +V LTRD + G ++DT G
Sbjct: 2 LKVAIVGLPNVGKSTIFNRLVKKRSAIVSNVPNLTRDRREGSADLCGLKFKVIDTGGVDY 61
Query: 385 REKEKGPASLSVM---QSRKNLMRAHVVALVLDA---EEVRAVEEGRGL 427
R K LSV+ Q + + V+ V+DA +++ +E + L
Sbjct: 62 RIK------LSVLILDQVKLAIEACDVIFFVVDARVERDIKNIEFAKYL 104
>gi|269958675|ref|YP_003328462.1| GTP-binding protein EngA [Anaplasma centrale str. Israel]
gi|269848504|gb|ACZ49148.1| GTP-binding protein EngA [Anaplasma centrale str. Israel]
Length = 438
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 246/471 (52%), Gaps = 56/471 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+G PNVGKS +FNRL+R + A+V N HVTRD +EG+A L+F +D+ G
Sbjct: 1 MQKVAIVGLPNVGKSTIFNRLVRSKSAIVSNVA--HVTRDRKEGVANFCGLQFVAIDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ +++ + L T +F++D + G D + KWLRK KP++
Sbjct: 59 VGAGTGMQALVTEQVELA---LECTDVVLFVVDAKKGTDAEDTDFAKWLRKRTS--KPVI 113
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NKCES N + +L + L F P+ ISAE LGM +LYE + P E
Sbjct: 114 LVVNKCES--NKSCALID---DMEYLDFLGPVYISAEHNLGMPDLYEVMSPLFEG----- 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
++ T++ + ++I+G+PNVGKST +N++L E RV+ AG
Sbjct: 164 ------EHRQKTRE----------KAITISIIGQPNVGKSTFMNSILGEKRVITDGTAGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRDS+ + Y+G + L DTAG +R K + LS+ + + R+ VV L++D
Sbjct: 208 TRDSISAEYCYKGVRLLLTDTAGIRKRAKVTENMEKLSIKSATDAISRSSVVVLMVDFTL 267
Query: 417 ---------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A+ EG+G+VV++NK DL+ K V+E + Q I+ +
Sbjct: 268 GINQQDLFIADTAIREGKGIVVVLNKSDLIDD-------KAVEEEILQAIRRHSRVDFDV 320
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++ SAL G G V+ + I+ ++ R+ T++LNRWL + H+ Q+ + ++K
Sbjct: 321 PIMKISALRGTGCSKVLDRAIELHKSASSRISTAQLNRWLNVALEHHAPHLQNNRKVRLK 380
Query: 527 YFTQVKARPPTFVAFLSGKKT-LSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV A PPTFV +S T + D+ L++L S +F + G+PIR+ R
Sbjct: 381 YITQVSALPPTFV--VSANTTHIEDSYLQYLKNSFIRNFSMQGVPIRLIVR 429
>gi|219124383|ref|XP_002182484.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405830|gb|EEC45771.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 489
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 252/499 (50%), Gaps = 62/499 (12%)
Query: 123 VMIIGRPNVGKSALFNRLI-----RRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
V I+G PN GKS LFNRL+ R A+V N P TRD RE + ++G F+++D+
Sbjct: 5 VSILGPPNAGKSTLFNRLLDKAANRAGTAIVSNVP--GTTRDRRECVGRIGGTLFRLVDT 62
Query: 178 AGLETEATS------------GSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVG 225
AG++ E G ++ G T + M D R G+ LE
Sbjct: 63 AGVDGERLELLAQSRRNQNGEGILMKFMMGQTLEAARQADLVFLMFDARVGVTADLLETA 122
Query: 226 KWLRKHA------------PQIKPIVAMNKCE-SLHNGTGSLA-GAAAESLMLGFGDPIA 271
+WLRK + P + + NK E N GS+ E+ LGFG+ I
Sbjct: 123 RWLRKISQREQDPAAQTALPDRQIFLLANKLEGDFWNFDGSIVLDHLTEATRLGFGEAIP 182
Query: 272 ISAETGLGMTELYEALRPSV--EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAI 329
ISA G G+ ++ + + + L +L+D D+ S + D+ K PLQLAI
Sbjct: 183 ISAHHGEGLADIAVLIEQAAVAKRQSLGILDDDT--------DLASNDSDKDK-PLQLAI 233
Query: 330 VGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWL---QRE 386
+GR NVGKSTL+NALL++DRV+VG GLTRD++ V + ++ R V +VDTAG QR
Sbjct: 234 LGRQNVGKSTLVNALLKQDRVIVGATPGLTRDAIAVEWTWKNRPVQIVDTAGIRKRSQRN 293
Query: 387 KEKGPASLSVMQSRKNLMRAHVVALVLDAEEVR-----------AVEEGRGLVVIVNKMD 435
E LSV + + + A V LVLDAE + ++EGR LVV NKMD
Sbjct: 294 HEDAIEDLSVEDALRAMKVADVAVLVLDAEARKLQRQELAIADAVLKEGRALVVAANKMD 353
Query: 436 LLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWC 495
L+ R S K E V +++ P + P+V S+L G +M V ++W
Sbjct: 354 LIVERGYSK--KDFAEDVRAQLEARYPILRKTPIVPMSSLTGDSVHKLMPVVFRARERWS 411
Query: 496 LRLPTSRLNRWLRKVM-GRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELR 554
++ T LNRW+ +VM G+ + +IKY Q K RPPTF+ F + +L + LR
Sbjct: 412 RKISTGELNRWIAEVMDGKPPPPVSGRKARIKYVMQTKGRPPTFLLFCN-VASLPENYLR 470
Query: 555 FLTKSLKEDFDLGGIPIRI 573
FLT++ ++ F++ G+ +R+
Sbjct: 471 FLTRNFQDTFEMFGMEVRM 489
>gi|88607492|ref|YP_504995.1| GTP-binding protein EngA [Anaplasma phagocytophilum HZ]
gi|88598555|gb|ABD44025.1| putative GTP-binding protein EngA [Anaplasma phagocytophilum HZ]
Length = 440
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 238/468 (50%), Gaps = 55/468 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+G PNVGKS LFNRL RR+ A+V + HVTRD +E L LRF +D+ G
Sbjct: 1 MQKVAIVGLPNVGKSTLFNRLTRRKSAIVSDIA--HVTRDRKEALVDFCGLRFIAIDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ A G I L +F+ID + +GKWL K KPI+
Sbjct: 59 V---ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITN--KPII 113
Query: 240 AM-NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ NKCES N +++ LGF P+ ISAE LGM +LYEA+ P +E
Sbjct: 114 LVANKCESNKNN------VHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQS--- 164
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
P+ D+ + P+ ++I+G+PNVGKST +N++L E+RV+ AG
Sbjct: 165 ----------------ERPKKDQDR-PIAISIIGQPNVGKSTFVNSILGEERVITSGIAG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + Y+G T+ L DTAG +R K + LSV + L ++HVV L++D
Sbjct: 208 TTRDSISAEYSYKGITLLLTDTAGIRKRTKVTENMEKLSVQSAIHALSKSHVVILIVDFT 267
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+++G+G+V+ +NK DL++ K ++A+ I+
Sbjct: 268 QGISQQDLSIASTAIKDGKGIVLALNKADLVND-------KAAEDAILNAIRQYSRVDFD 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+P++ SALE G V+ + + Y+ + TS+LN+WL + H Q+ + ++
Sbjct: 321 VPIMKMSALENIGCDKVLSKAVKIYESASTHISTSKLNKWLGTAIDYHPPHLQNKKKVRL 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
KY +QV PPTFV + + S + +L S + F + G+PIR+
Sbjct: 381 KYISQVSTLPPTFVIATNSTEVESTYQ-TYLKNSFLKHFSMQGVPIRM 427
>gi|353328225|ref|ZP_08970552.1| GTP-binding protein Der [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 441
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 257/473 (54%), Gaps = 68/473 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
++IIG PN GKS LFNRL+RR+ A+V + P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IVIIGLPNAGKSTLFNRLVRRKAAVVSDIPG--VTRDRREGIGRISDLEFKVIDTGGWND 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGL------HPLDLEVGKWLRKHAPQIK 236
+ + + V+ + +F++ DV L + + E KWL++ K
Sbjct: 62 QTS----------FSLQVIEQIEFSLLSADVIFFLVDAKVQNEQNKEFAKWLKRKTN--K 109
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NKCES + F P+ ISAE LGM +LY+ L +ED+
Sbjct: 110 PVILIANKCESHKSENVDYLQ------FFNFIGPVYISAEHNLGMIDLYDVLAGVIEDF- 162
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
N T+ PE + + L++AI+GRPNVGKST LN+LL E+R++V +
Sbjct: 163 -----------NKKTE---LPESES--IRLRIAIIGRPNVGKSTFLNSLLAENRLIVSSK 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVL 413
G TRDSV + +++ G+ + L+DTAG ++R+ S V +S +++ R+HVV L+L
Sbjct: 207 PGTTRDSVDISYDHNGKLITLIDTAG-IRRKANVVDNLESRFVEKSMESIKRSHVVVLML 265
Query: 414 D------------AEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
D AE A++ G+G+++++NK DL+ S L K VK+ QE+ +
Sbjct: 266 DSLLGIEQQDLSIAEA--AIKGGKGIIIVLNKWDLIGKDDRSKLIKFVKQ---QEVTRLF 320
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
+V P V SAL+G V+ + ++ + ++ T++LN+WL + +HS
Sbjct: 321 LEV---PTVTISALKGMRCGDVIDKCLEVSESLNKKISTAKLNKWLIDAVEKHSHPLIKG 377
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY Q+ +PP F + +++ ++ R+LT L+++F + G+P+R+
Sbjct: 378 RAIKMKYIAQIGTKPPAFSLVCNVPESVDESYKRYLTNGLRKNFFVEGVPVRL 430
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++ I+G PN GKSTL N L++ +V G+TRD ++DT GW
Sbjct: 2 LKIVIIGLPNAGKSTLFNRLVRRKAAVVSDIPGVTRDRREGIGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L+ A V+ ++DA+
Sbjct: 60 --NDQTSFSLQVIEQIEFSLLSADVIFFLVDAK 90
>gi|94311040|ref|YP_584250.1| GTP-binding protein Der [Cupriavidus metallidurans CH34]
gi|123383733|sp|Q1LLJ5.1|DER_RALME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|93354892|gb|ABF08981.1| GTP-binding protein [Cupriavidus metallidurans CH34]
Length = 447
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 246/470 (52%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++GD F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGDRPFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK ++ ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRV--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AIS+ G G+ EL EAL
Sbjct: 118 INKAEGM-----KYTSVAADFYELGMGDPYAISSTHGDGVRELVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D Q D ++D + +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 161 -DLAVQERPELAD----QEDAGQHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G Q RVK + +++Q ++
Sbjct: 276 ISEQDAHIAGFIVESGRALVVGVNKWDGLDGHQRD----RVKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKY 527
+ F SA E G A++ V D Y ++LPT ++ R L++ + K ++PK++Y
Sbjct: 328 IHFVSARERTGIGALLRSVDDAYAAAMIKLPTPQITRVLQEAVEFQQPKRVGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + ++DA R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIVVHGNALSGVTDAYRRYLENRFRTAFKLKGTPLRIEFRT 437
>gi|225630952|ref|YP_002727743.1| GTP-binding protein [Wolbachia sp. wRi]
gi|225592933|gb|ACN95952.1| GTP-binding protein [Wolbachia sp. wRi]
Length = 441
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 258/465 (55%), Gaps = 52/465 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNRL+ R+ A+V N P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IAIVGLPNAGKSTLFNRLVGRKAAVVSNIPG--VTRDRREGMGRISDLEFKVIDTGGW-N 60
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+ TS S+ + L+ + F++D + + + E KWL++ KP++ +
Sbjct: 61 DQTSFSL--QVIEQIEFSLSSSNIIFFLVDAKVQ-NERNKEFAKWLKRKIN--KPVILIA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCES + F P+ ISAE LGM +LY+AL +E++
Sbjct: 116 NKCESHKSENVDYLQ------FFDFLGPVYISAEHNLGMVDLYDALAGVIENF------- 162
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
N +T+ P ++ S+L ++AI+GRPNVGKST LN LL E+R++ E G TRD
Sbjct: 163 -----NENTE---LPNNELSRL--RIAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTRD 212
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDA---- 415
SV + +++ G + L+DTAG ++R+ G S V +S +++ R+HVV L+LD+
Sbjct: 213 SVDITYDHDGELITLIDTAG-IRRKANVVDGLESRFVEKSMESIKRSHVVVLMLDSLVGI 271
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++ A++ G+G++V++NK DL+ S L K VK+ QE+ + +V P
Sbjct: 272 EQQDLSIGEAAIKGGKGIIVVLNKWDLIGKDDRSRLIKFVKQ---QEVTRLFLEV---PT 325
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
+ SAL+G V+ + ++ + ++ T++LN+WL +G+HS + K+KY
Sbjct: 326 ITISALKGMRCGDVIDKCLEVSESLNKKISTAKLNKWLIDAVGKHSHPLVKGKAVKMKYI 385
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q+ +PP F + +++ ++ R+L L+++F G+P+R+
Sbjct: 386 AQIGTKPPAFSLICNIPESVDESYKRYLINDLRKNFFADGVPVRL 430
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKIAIVGLPNAGKSTLFNRLVGRKAAVVSNIPGVTRDRREGMGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L ++++ ++DA+
Sbjct: 60 --NDQTSFSLQVIEQIEFSLSSSNIIFFLVDAK 90
>gi|225631062|ref|ZP_03787800.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591242|gb|EEH12386.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 441
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 258/466 (55%), Gaps = 54/466 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNRL+ R+ A+V N P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IAIVGLPNAGKSTLFNRLVGRKAAVVSNIPG--VTRDRREGMGRISDLEFKVIDTGGWND 61
Query: 183 EAT-SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ S ++++ +N + F++D + + + E KWL++ KP++ +
Sbjct: 62 QTNFSLQVIEQIEFSLSN----SNIIFFLVDAKVQ-NERNEEFAKWLKRKIN--KPVILV 114
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NKCES + F P+ ISAE LGM +LY+AL +E++
Sbjct: 115 ANKCESHKSENVDYLQ------FFDFLGPVYISAEHNLGMVDLYDALAGVIENF------ 162
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
N +T+ P ++ S+L ++AI+GRPNVGKST LN LL E+R++ E G TR
Sbjct: 163 ------NENTE---LPNNELSRL--RIAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDA--- 415
DSV + +++ G + L+DTAG ++R+ G S V +S +++ R+HVV L+LD+
Sbjct: 212 DSVDITYDHDGELITLIDTAG-IRRKANVVDGLESRFVEKSMESIKRSHVVVLMLDSLVG 270
Query: 416 ---EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ A++ G+G++V++NK DL+ S L K VK+ QE+ + +V P
Sbjct: 271 IEQQDLSIGEAAIKGGKGIIVVLNKWDLIGKDDRSRLIKFVKQ---QEVTRLFLEV---P 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+ SAL+G V+ + ++ + ++ T++LN+WL +G+HS + K+KY
Sbjct: 325 TITISALKGMRSGDVIDKCLEVSESLNKKISTAKLNKWLIDAVGKHSHPLVKGKAVKMKY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q+ +PP F + +++ ++ R+L L+++F G+P+R+
Sbjct: 385 IAQIGTKPPAFSLICNIPESVDESYKRYLINDLRKNFFADGVPVRL 430
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKIAIVGLPNAGKSTLFNRLVGRKAAVVSNIPGVTRDRREGMGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L ++++ ++DA+
Sbjct: 60 --NDQTNFSLQVIEQIEFSLSNSNIIFFLVDAK 90
>gi|430806176|ref|ZP_19433291.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
gi|429501556|gb|EKZ99887.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
Length = 447
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 246/470 (52%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++GD F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGDRPFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK ++ ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRV--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AIS+ G G+ EL EAL
Sbjct: 118 INKAEGM-----KYTSVAADFYELGMGDPYAISSTHGDGVHELVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D Q D ++D + +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 161 -DLAVQERPELAD----QEDAGQHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G Q RVK + +++Q ++
Sbjct: 276 ISEQDAHIAGFIVESGRALVVGVNKWDGLDGHQRD----RVKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKY 527
+ F SA E G A++ V D Y ++LPT ++ R L++ + K ++PK++Y
Sbjct: 328 LHFVSARERTGIGALLRSVDDAYAAAMIKLPTPQITRVLQEAVEFQQPKRVGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + ++DA R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIVVHGNALSGVTDAYRRYLENRFRTAFKLKGTPLRIEFRT 437
>gi|413962510|ref|ZP_11401737.1| GTP-binding protein Der [Burkholderia sp. SJ98]
gi|413928342|gb|EKS67630.1| GTP-binding protein Der [Burkholderia sp. SJ98]
Length = 446
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 242/471 (51%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAG 179
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G R + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E A G IL A T + + +F++D R+GL P D + +LRK +P+
Sbjct: 61 FEPVAKDG-ILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTG---RPLF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E + + AA+ LG GDP AISA G G+ E+
Sbjct: 117 LVVNKAEGM-----KYSAVAADFYELGLGDPRAISAAHGDGVVEM--------------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ND+ + + ED+++K +++AIVGRPNVGKSTL+N L+ E+RV+ G
Sbjct: 157 INDAL--DIAYKDQPEESEDEKAKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE QGR L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 215 TRDSIYVDFERQGRKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQ 274
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 275 DISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKSDLTRKLKFLDFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SALE G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 327 KFHYVSALEKTGIGALMKSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 387 YAHQGGQNPPIIVVHGNALDAITDTYKRYLEGRFRETFGLAGTPLRIEFRS 437
>gi|42520904|ref|NP_966819.1| GTP-binding protein EngA [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410645|gb|AAS14753.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 441
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 258/466 (55%), Gaps = 54/466 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNRL+ R+ A+V N P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IAIVGLPNAGKSTLFNRLVGRKAAVVSNIPG--VTRDRREGMGRISDLEFKVIDTGGWND 61
Query: 183 EAT-SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ S ++++ +N + F++D + + + E KWL++ KP++ +
Sbjct: 62 QTNFSLQVIEQIEFSLSN----SNIIFFLVDAKVQ-NERNEEFAKWLKRKIN--KPVILV 114
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NKCES + F P+ ISAE LGM +LY+AL +E++
Sbjct: 115 ANKCESHKSENVDYLQ------FFDFLGPVYISAEHNLGMVDLYDALAGVIENF------ 162
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
N +T+ P ++ S+L ++AI+GRPNVGKST LN LL E+R++ E G TR
Sbjct: 163 ------NENTE---LPNNELSRL--RIAIIGRPNVGKSTFLNGLLAENRLITSSEPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDA--- 415
DSV + +++ G + L+DTAG ++R+ G S V +S +++ R+HVV L+LD+
Sbjct: 212 DSVDITYDHDGELITLIDTAG-IRRKANVVDGLESRFVEKSMESIKRSHVVVLMLDSLVG 270
Query: 416 ---EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+++ A++ G+G++V++NK DL+ S L K VK+ QE+ + +V P
Sbjct: 271 IEQQDLSIGEAAIKGGKGIIVVLNKWDLIGKDDRSRLIKFVKQ---QEVTRLFLEV---P 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+ SAL+G V+ + ++ + ++ T++LN+WL +G+HS + K+KY
Sbjct: 325 TITISALKGMRCGDVIDKCLEVSESLNKKISTAKLNKWLIDAVGKHSHPLVKGKAVKMKY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q+ +PP F + +++ ++ R+L L+++F G+P+R+
Sbjct: 385 IAQIGTKPPAFSLICNIPESVDESYKRYLINDLRKNFFADGVPVRL 430
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKIAIVGLPNAGKSTLFNRLVGRKAAVVSNIPGVTRDRREGMGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L ++++ ++DA+
Sbjct: 60 --NDQTNFSLQVIEQIEFSLSNSNIIFFLVDAK 90
>gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1]
gi|81821192|sp|Q5P7B7.1|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1]
Length = 442
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 246/474 (51%), Gaps = 60/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL + R+ALV + P +TRD G+ ++GD + V+D+AG
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRDALVADQPG--LTRDRHYGIGRVGDRDYLVVDTAGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
+ A G I+ A +A+ +FM+D RSGL P D ++ LR+ +P+ +
Sbjct: 61 DPVAKDG-IMHEMARQAEQAIAEADALLFMVDGRSGLTPHDEQIAARLRRAG---RPVYL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE----ALRPSVEDYM 295
+NK E + AAE LG GDP+ +SA G G+ +L + A P VE
Sbjct: 117 VVNKSEGMERTM-----VAAEFHALGLGDPLPVSASHGEGVKQLLDLVLGAFPPDVE--- 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
PE+DE + P ++AIVGRPNVGKST +N+LL E+RV+
Sbjct: 169 --------------------PEEDEGRTP-RIAIVGRPNVGKSTFVNSLLGEERVIAFDM 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD++ + FE GR L+DTAG +R K + SV+++ + + +A+VV LVLD
Sbjct: 208 PGTTRDAIAIPFERDGRHYTLIDTAGLRRRGKVFEAVEKFSVIKTLQAIEQANVVVLVLD 267
Query: 415 AEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + + +E GR LVV VNK D + Y+R E + Q++ + +
Sbjct: 268 ASQDISDQDAHIAGFILEAGRALVVAVNKWDDVDD------YRR--ELIKQDLTRKLNFL 319
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
+ + SAL+G G AVM V Y + L T RL R ++ + + + +P
Sbjct: 320 SFARFHYISALKGAGVAAVMKSVDAAYAAAMVNLSTPRLTRTMQAALAKQAPPRHGVFRP 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + + + +R+L ++ E F L G P+RI R+
Sbjct: 380 KMRYAHQGGNNPPVVVIHGAALDHVPTSYVRYLERTFMEAFKLQGTPLRIQFRT 433
>gi|320335804|ref|YP_004172515.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211]
gi|319757093|gb|ADV68850.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211]
Length = 441
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/463 (33%), Positives = 243/463 (52%), Gaps = 54/463 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS+LFNRL+ RREA+V + P VTRD +EG+ + R ++D+ GL
Sbjct: 4 VAIVGRPNVGKSSLFNRLVGRREAVVADFPG--VTRDAKEGVMLYQNHRIVLIDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG + A + Q IF++D R L D EV +WLR+ + IV
Sbjct: 60 --WSGDEWEEAIRQKAEWAMEGAQCVIFVLDPRDDLSAADYEVAEWLRRLGKPV--IVVA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK ++ + AE LGFG+P+ +SAE G+ +D M RVL D
Sbjct: 116 NKIDNPKHD-----AYLAELWGLGFGEPLPVSAEHARGL-----------DDLMDRVL-D 158
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++++ +V P++++++GRPNVGKS+LLNA+ +RV+V G TRD
Sbjct: 159 YLPEDDADVPEVA---------PIRISLIGRPNVGKSSLLNAITGSERVIVSDVPGTTRD 209
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
SV V ++Y G+ LVDTAG +++ + ++M+S + R+ V+ LVL+ E+
Sbjct: 210 SVDVEWDYAGQRFVLVDTAG-IRKRPDTSIEEYAMMRSEAAITRSDVILLVLNVTELGDH 268
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A + G+ ++V+VNK DL+ K+ ++ + Q++ + P V+T
Sbjct: 269 ELKLANLAYDSGKPVIVVVNKWDLVPDED----LKKAEKDLDQKLF----HIAFAPRVYT 320
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKYFTQV 531
SA+ G ++ + + Y KW R+PTS LNRWL R + Q K+ + TQ
Sbjct: 321 SAINEYGIHDLLAEAMKLYAKWQSRIPTSELNRWLGVWQMRQRVPNFHGKQLKMYFMTQA 380
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+ PPTFV F + ++ + FL ++ED L GIP++I
Sbjct: 381 ETAPPTFVIFANRADYVTRSYENFLHNRIREDLQLAGIPVKIV 423
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 21/124 (16%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG-WLQ 384
++AIVGRPNVGKS+L N L+ +V G+TRD+ YQ + L+DT G W
Sbjct: 3 KVAIVGRPNVGKSSLFNRLVGRREAVVADFPGVTRDAKEGVMLYQNHRIVLIDTGGLWSG 62
Query: 385 REKEKGPASLSVMQSRKNLMR-AHVVALVLD------------AEEVRAVEEGRGLVVIV 431
E E+ ++ Q + M A V VLD AE +R + G+ ++V+
Sbjct: 63 DEWEE-----AIRQKAEWAMEGAQCVIFVLDPRDDLSAADYEVAEWLRRL--GKPVIVVA 115
Query: 432 NKMD 435
NK+D
Sbjct: 116 NKID 119
>gi|57239243|ref|YP_180379.1| GTP-binding protein EngA [Ehrlichia ruminantium str. Welgevonden]
gi|58579205|ref|YP_197417.1| GTP-binding protein EngA [Ehrlichia ruminantium str. Welgevonden]
gi|57161322|emb|CAH58245.1| putative GTP binding protein EngA [Ehrlichia ruminantium str.
Welgevonden]
gi|58417831|emb|CAI27035.1| Probable GTP-binding protein engA [Ehrlichia ruminantium str.
Welgevonden]
Length = 439
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 249/471 (52%), Gaps = 66/471 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+G PNVGKS +FNRL+++R A+V N P+ +TRD REG A L L+FKV+D+ G++
Sbjct: 4 VAIVGLPNVGKSTIFNRLVKKRSAIVSNVPN--LTRDRREGSADLCGLKFKVIDTGGVDY 61
Query: 183 EAT-SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
S ILD+ + F++D R ++E K+LRK+ KPI+ +
Sbjct: 62 RIKLSVLILDQVKL----AIEACDVIFFVVDARVERDIKNIEFAKYLRKNTH--KPIILI 115
Query: 242 -NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NKCES + + L F PI ISAE LGM +LY+AL P + +
Sbjct: 116 ANKCESRK------KCSEVDYLEYFNFIGPIYISAEHNLGMVDLYDALIPFIPE------ 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
S+ ++ TS ++++IVGRPN GKST +N L+ EDR++V E G T
Sbjct: 164 --------SNVENFTSSY-------IKISIVGRPNAGKSTFVNRLVGEDRMIVSSEPGTT 208
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLD-- 414
RD+V + +EYQ + L+DTAG R+K K ++ SV +S +++ R+ ++ L++D
Sbjct: 209 RDAVDIEYEYQDQKFILIDTAG--MRKKAKITENIEVTSVYKSIESINRSDIIILMIDSV 266
Query: 415 ----------AEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AE V +++G+ +++ +NK D++S L + ++
Sbjct: 267 CGMEQQDLSIAELV--IQKGKAIIIALNKWDVISKEHRLGLLRDIRNYNKLSFD------ 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
+P++ SAL+ V+ + I+ Y+ +R+ T LN+WLR + H + +
Sbjct: 319 --VPIIEISALKNINCNMVLEKSIELYKYLTMRISTPMLNKWLRLAVDHHRPPLFNGKTV 376
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
K+KY TQ+K PPTF ++G + ++L SL++ F + GIPIR+
Sbjct: 377 KLKYITQIKVMPPTFAIVINGLYGIDLTYQQYLMNSLRKYFSIDGIPIRMN 427
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PNVGKST+ N L+++ +V LTRD + G ++DT G
Sbjct: 2 LKVAIVGLPNVGKSTIFNRLVKKRSAIVSNVPNLTRDRREGSADLCGLKFKVIDTGGVDY 61
Query: 385 REKEKGPASLSVM---QSRKNLMRAHVVALVLDA---EEVRAVEEGRGL 427
R K LSV+ Q + + V+ V+DA +++ +E + L
Sbjct: 62 RIK------LSVLILDQVKLAIEACDVIFFVVDARVERDIKNIEFAKYL 104
>gi|377820986|ref|YP_004977357.1| small GTP-binding protein [Burkholderia sp. YI23]
gi|357935821|gb|AET89380.1| small GTP-binding protein [Burkholderia sp. YI23]
Length = 446
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 242/471 (51%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAG 179
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G R + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E A G IL A T + + +F++D R+GL P D + +LRK +P+
Sbjct: 61 FEPIAKDG-ILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTG---RPLF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E + + AA+ LG GDP AISA G G+ E+
Sbjct: 117 LVVNKAEGM-----KYSAVAADFYELGLGDPRAISAAHGDGVVEM--------------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ND+ + T E++++K +++AIVGRPNVGKSTL+N L+ E+RV+ G
Sbjct: 157 INDALDIAYKDQPEET--EEEKAKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE QGR L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 215 TRDSIYVDFERQGRKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQ 274
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 275 DISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKADLSRKLKFLDFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SALE G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 327 KFHYVSALEKTGIGALMKSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 387 YAHQGGQNPPIIVVHGNALDAITDTYKRYLEGRFRETFGLAGTPLRIEFRS 437
>gi|339319701|ref|YP_004679396.1| GTP-binding protein [Candidatus Midichloria mitochondrii IricVA]
gi|338225826|gb|AEI88710.1| GTP-binding protein [Candidatus Midichloria mitochondrii IricVA]
Length = 448
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 235/466 (50%), Gaps = 48/466 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V+I+G+PNVGKSALFNRL R+ A+V T TRD +E L DL F ++D+AG
Sbjct: 4 PKVVIVGKPNVGKSALFNRLCGRKIAIV--TDAAGTTRDRKECLVNFDDLNFLLVDTAGW 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E + T + + IFM++ ++ L DLE +RK ++ I+
Sbjct: 62 ENEHKKHQMKSLMMSQTQEGIKEADIIIFMVEAKNPLTSDDLEFAGLVRKSNKKV--ILV 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK ES +A +A + + GFG+ + I+AE LG+ LY AL ++++
Sbjct: 120 VNKSES------KVALSANDFMPFGFGEAVYIAAEHSLGLDVLYNALSTELKNF------ 167
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
S +D++ L LAIVGRPN GKST+ N LL R + EAG TR
Sbjct: 168 -------------PSVKDEQQHEKLLLAIVGRPNAGKSTIFNQLLGFRRSITSAEAGTTR 214
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ + + L+DTAG ++ K + LS Q+ + RA+VVAL++DA +
Sbjct: 215 DAISYDINFNDTLISLIDTAGLRKKNKVHEEIEKLSNAQTITAIRRANVVALIVDATQGF 274
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ EG+GL ++ NK K++K+ + + + P+
Sbjct: 275 EQQDLAIAQMVINEGKGLFLVFNK------HDLVKDKKKLKDDIEYLFAHSLTAIMNTPI 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKY 527
+ T+AL G ++ ++ Q W L TS LN+WL + H S+ + + K+KY
Sbjct: 329 LHTNALAGVSVERIISTALEVKQSWEKTLTTSMLNKWLEASIHNHQPSFTNDGRRIKLKY 388
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ+K+RPPTF F++ ++S R+L L++ F+ G PIRI
Sbjct: 389 ITQIKSRPPTFKVFVNFPASVSKHYERYLNHDLQKHFNFVGTPIRI 434
>gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M]
gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M]
Length = 445
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 243/472 (51%), Gaps = 49/472 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + ++ +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK E + T AA+ LG GDP AISA G G+TE+
Sbjct: 115 FLVVNKAEGMKYST-----VAADFYELGLGDPRAISAAHGDGVTEM-------------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+N++ + Q S ED E++ +++AIVGRPNVGKSTL+NAL+ E+RV+ G
Sbjct: 156 -INEALGVAYAG-QPEESDEDKEAR-GVKIAIVGRPNVGKSTLINALVGEERVIAFDMPG 212
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE QG+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 213 TTRDSIYVDFERQGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAR 272
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + VE+GR LVV VNK D L V+E +++ + +
Sbjct: 273 QDISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKADLERKLKFLDF 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
F SA E G +M V D Y +LPT +L R L V + + +PK+
Sbjct: 325 AKFHFISAAEKTGIGPLMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKL 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 385 RYAHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|190571288|ref|YP_001975646.1| GTP-binding protein EngA [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018685|ref|ZP_03334493.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357560|emb|CAQ54999.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995636|gb|EEB56276.1| GTP-binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 441
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 254/467 (54%), Gaps = 56/467 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
++IIG PN GKS LFNRL+ R+ A+V + P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IVIIGLPNAGKSTLFNRLVGRKAAVVSDIPG--VTRDRREGIGRISDLEFKVIDTGGW-N 60
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+ TS S+ + L+ F++D + + + E KWL++ KP++ +
Sbjct: 61 DQTSFSL--QVIEQIEFSLSSADVVFFLVDAKVQ-NEQNKEFAKWLKRKTN--KPVILIA 115
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NKCES + F P+ ISAE LGM +LY+AL +E
Sbjct: 116 NKCESHKSENVDYLQ------FFNFIGPVYISAEHNLGMVDLYDALAGVIEGL------- 162
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++ PE + + L++AI+GRPNVGKST LN+LL E+R++V E G TRD
Sbjct: 163 --------SEGTELPESES--IRLRIAIIGRPNVGKSTFLNSLLAENRLIVSSEPGTTRD 212
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLD----- 414
SV + +++ G+ + L+DTAG ++R+ S V +S +++ R+HVV L+LD
Sbjct: 213 SVDISYDHNGKLITLIDTAG-IRRKANVVDNLESRFVEKSIESIKRSHVVILMLDSLLGI 271
Query: 415 -------AEEVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
AE A++ G+G+++++NK DL+ S L K VK+ QE+ + +V
Sbjct: 272 EQQDLSIAEA--AIKGGKGIIIVLNKWDLIGKDDRSKLIKFVKQ---QEVTRLFLEV--- 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
P V SAL+G V+ + ++ + ++ T++LN WL + +HS + + K+K
Sbjct: 324 PTVTISALKGMRCGDVIDKCLEVSESLNKKISTAKLNNWLIDAVEKHSHPLIKGREIKMK 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y Q+ +PP F + +++ ++ R+LT L+++F + G+P+R+
Sbjct: 384 YIAQIGTKPPAFSLVCNVPESVDESYKRYLTNGLRKNFFVEGVPVRL 430
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++ I+G PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKIVIIGLPNAGKSTLFNRLVGRKAAVVSDIPGVTRDRREGIGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L A VV ++DA+
Sbjct: 60 --NDQTSFSLQVIEQIEFSLSSADVVFFLVDAK 90
>gi|86605901|ref|YP_474664.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
gi|123506716|sp|Q2JV46.1|DER_SYNJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86554443|gb|ABC99401.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
Length = 459
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 237/471 (50%), Gaps = 47/471 (9%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V ++GRPNVGKS+L NRL R A+V++ P +TRD + R +V+D+ G
Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRSAIVHDEPG--ITRDRLYQEVEWNGRRLRVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L L +A+ IF++D R GL P D E+ WLR+ + +V
Sbjct: 61 L-VFGDDSEFLPHIRQQAMAAMAEAHAVIFVVDGREGLTPADKELADWLRRQP--LPVVV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G LA AAA LG G+PI SA G G+ EL EA+ P + +
Sbjct: 118 AVNKCES---GQLGLAQAAA-FWELGLGEPIPCSAVHGNGVAELLEAVLPHLPE------ 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
V DE P+ +AIVGRPNVGKS+LLN L+ +R +V P AG T
Sbjct: 168 -------------VAQEAADEPD-PIAVAIVGRPNVGKSSLLNRLVGSERAIVSPIAGTT 213
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V E++G++ L+DTAG ++ + E G S+ ++ K + R+ VV LV+DA E
Sbjct: 214 RDAVDTLVEWEGQSYRLIDTAGIRRKSRVEYGVEFFSINRAFKAIQRSDVVLLVIDALEG 273
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R EEGR +++VNK D + + + + + EI+ + + P
Sbjct: 274 VTEQDQRLAGRIEEEGRACIIVVNKWDAVENKDTHTINEYTR-----EIRERLYFIDWAP 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
++F SAL G+ + +V R+ TS +N L+ + S Q Q KI
Sbjct: 329 LLFVSALTGQRTHKIFAEVNTAVAAHRKRIATSVVNEVLQDALAWQSPPANRQGKQGKIY 388
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV RPPTF+ F++ + R+L K +++ D G PIR RS
Sbjct: 389 YGTQVAERPPTFLLFVNDPDLFKENYRRYLEKHFRQNLDFTGTPIRFRWRS 439
>gi|73541770|ref|YP_296290.1| GTP-binding protein EngA [Ralstonia eutropha JMP134]
gi|123732900|sp|Q46ZI7.1|DER_RALEJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72119183|gb|AAZ61446.1| Small GTP-binding protein protein domain:GTP-binding protein
[Ralstonia eutropha JMP134]
Length = 447
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 245/470 (52%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++GD F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGDRPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G I+ A T + + IF++D R GL P D + +LRK ++ ++A
Sbjct: 61 EPVVKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRV--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G+ EL EAL +V++
Sbjct: 118 VNKAEGM-----KYTSVAADFYELGMGDPYAISAAHGDGVRELVDEALELAVQE------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + ED +S +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 167 -----------RPELAEEDADSGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRD----RIKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKY 527
F SA E G A+M V D Y ++LPT +L R L++ + K ++PK++Y
Sbjct: 328 FHFVSARERTGIGALMRSVDDAYAAAMVKLPTPQLTRVLQEAVEFQQPKRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + ++S+ R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIVIHGNALSSVSETYRRYLENRYRAAFKLKGTPLRIEFRT 437
>gi|297746328|emb|CBI16384.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 248/480 (51%), Gaps = 57/480 (11%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LLP V I+GRPNVGKSALFNRL+ +A+V + P VTRD G A GD F V+D+
Sbjct: 185 HLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEP--GVTRDRLYGRAFWGDYEFMVIDT 242
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G+ T + S TA + ++ IF++D ++GL D+E+ WLRK+
Sbjct: 243 GGVLTISKSQDNKQATAA-----IEESSVIIFLVDGQAGLSAADVEIADWLRKNYSNKCI 297
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
++A+NKCES G A E LGF P+ ISA +G G EL + +
Sbjct: 298 VLAVNKCESPKKGIMQ----ALEFWSLGF-TPLPISAVSGTGTGELLDLV---------- 342
Query: 298 VLNDSCTQNNSSTQDVTSPE--DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
C S + + PE D E +AIVGRPNVGKS++LNAL+ EDR +V P
Sbjct: 343 -----C----SGLKKIEDPENLDGEENYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPV 393
Query: 356 AGLTRDSVRVHFEY-QGRTVYLVDTAGWLQREKEKGPAS----LSVMQSRKNLMRAHVVA 410
+G TRD++ F G+ L+DTAG +R S LSV ++ + + R+ VVA
Sbjct: 394 SGTTRDAIDTEFTGPDGQKYRLIDTAGIRRRAAVASSGSTTEALSVNRAFRAIRRSDVVA 453
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGR-QNSALYKRVKEAVPQEIQT 459
LV++A ++ R E EG+G +++VNK D + + Q +A Y Q+++
Sbjct: 454 LVIEAMACITEQDYRIAERIEREGKGCLIVVNKWDTIPNKNQQTATYYE------QDVRE 507
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WK 517
+ + P+V+++A+ G ++ ++ RL TS LN+ +++ + S
Sbjct: 508 KLRVLGWAPIVYSTAIAGHSVDKIIVAASTVEKERSRRLSTSILNQVVQEALAFKSPPRN 567
Query: 518 DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ ++ Y TQ RPPTFV F++ K + R++ K L+ D G PIR+ RS
Sbjct: 568 RGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRS 627
>gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
Length = 445
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 242/472 (51%), Gaps = 49/472 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + ++ +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK E + + AA+ LG GDP AISA G G+TE+
Sbjct: 115 FLVVNKAEGM-----KYSAVAADFYELGLGDPRAISAAHGDGVTEM-------------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+N++ + + + +DD+ +++AIVGRPNVGKSTL+NAL+ E+RV+ G
Sbjct: 156 -INEALGVAYAGQPEES--DDDKEARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPG 212
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE QG+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 213 TTRDSIYVDFERQGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAR 272
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + VE+GR LVV VNK D L V+E +++ + +
Sbjct: 273 QDISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKADLERKLKFLDF 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
F SA E G +M V D Y +LPT +L R L V + + +PK+
Sbjct: 325 AKFHFISAAEKTGIGPLMRSVDDAYTAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKL 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 385 RYAHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|338535032|ref|YP_004668366.1| GTP-binding protein Der [Myxococcus fulvus HW-1]
gi|337261128|gb|AEI67288.1| GTP-binding protein Der [Myxococcus fulvus HW-1]
Length = 459
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 237/473 (50%), Gaps = 47/473 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL RR ALV + P VTRD A+ F +D+ G
Sbjct: 3 PLVAIVGRPNVGKSTLFNRLAGRRLALVQDEP--GVTRDRHYADAEWEGRHFTFIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+L + + + +F+ D R+GL D V +LRK KP+V
Sbjct: 61 -VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVATYLRKSG---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A NK L N +G + A E LG GD A+SAE GLGM EL++A+
Sbjct: 117 AANK---LDNTSGQMLSLAGEFYRLGLGDVQALSAEHGLGMQELFDAVV----------- 162
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
S +D +P DD ++LAI+GRPNVGKSTL+NA+L+E RV+ AG T
Sbjct: 163 --SKLPPKEEGEDAEAPPDDGI---IRLAIIGRPNVGKSTLVNAILKEKRVVASEVAGTT 217
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD V Y+ R + L DTAG ++R+K + SV+ + K + R+ V L++DA E
Sbjct: 218 RDPVDSELTYKDRKLLLTDTAG-IRRKKSIAQRVEQFSVVAALKVMERSDVAVLLMDATE 276
Query: 418 VR----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GR LV++VNK DL+ Q R +E + ++ + V
Sbjct: 277 PAVDQDAKLAGLAEERGRALVIVVNKWDLVGADQ------RRQETYRESLKYALKFVGYA 330
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++FTSAL G V+ + ++ R PT +LNR L ++ H +P ++
Sbjct: 331 PILFTSALTGSKVEKVVDVATELADQFRFRAPTPQLNRLLEHMVDNHPAPIVRGKPLRLY 390
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
Y QV A PPTF ++ + D R++T L++ FDL +PIR+ + P
Sbjct: 391 YIAQVAAAPPTFTITVNHPDGVPDMYKRYITNQLRKTFDL-RVPIRLIFKGRP 442
>gi|374852463|dbj|BAL55395.1| GTP-binding protein EngA [uncultured beta proteobacterium]
Length = 455
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 253/483 (52%), Gaps = 66/483 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPT++++GRPNVGKS LFNRL R R+ALV N P +TRD R G K+G + V+D+AG
Sbjct: 5 LPTLVLVGRPNVGKSTLFNRLTRSRDALVANVPG--LTRDRRYGRGKVGGRPYLVVDTAG 62
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
+ A G +TA ++ + + AI F++D R+GL P D + +LR
Sbjct: 63 FDPTAKEG--------LTAEMVRQAELAIREADLVLFVVDGRAGLTPHDEAIADYLRALG 114
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTEL-YEALRPSV 291
++ V +NK E L A A AE LGFG+P+ ISA G G+ E+ +E L P
Sbjct: 115 VAVR--VLVNKTEGLDR-----AIARAEFYALGFGEPLPISASHGDGVREMIHEVLAPF- 166
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPE-DDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
N ++ S E DE + ++A++GRPNVGKSTL+NALL E+R+
Sbjct: 167 ---------PKPKPNKEPLAEMQSEETGDEDGI--RVAVLGRPNVGKSTLINALLGENRL 215
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-----LSVMQSRKNLMR 405
+ G TRD++ V FE+ GR LVDTAG ++KG + SV+++ + + +
Sbjct: 216 IAYDMPGTTRDAIDVPFEHNGRAYTLVDTAGV----RKKGRVTDTIEKFSVIKALQAVEQ 271
Query: 406 AHVVALVLDA-EEVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV L LDA +EV +E GR LV+ VNK D Q +R+K +
Sbjct: 272 ANVVILTLDATQEVGEQDAHLGGFILETGRALVIAVNKWDAADAYQR----QRIKTQLAH 327
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
++ ++ PVVF SA G+G A+M V + +LPT +L R L++++ R +
Sbjct: 328 KLAF----LSFAPVVFLSAKTGKGLDALMRAVDQAFAAAMKKLPTPQLTRVLQELVKRQA 383
Query: 516 WKDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+PK +Y Q + PP V + + L + LR+L E F L G P+R+
Sbjct: 384 PPRHGLFRPKPRYAHQGGSNPPIIVIHGNALEHLPKSYLRYLEHGFTEAFGLKGTPLRLE 443
Query: 575 QRS 577
R+
Sbjct: 444 LRT 446
>gi|390568827|ref|ZP_10249119.1| GTP-binding protein Der [Burkholderia terrae BS001]
gi|420254110|ref|ZP_14757131.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
gi|389939176|gb|EIN01013.1| GTP-binding protein Der [Burkholderia terrae BS001]
gi|398050089|gb|EJL42477.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
Length = 446
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 241/474 (50%), Gaps = 52/474 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDS 177
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G R + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGGERPYLVVDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G E A G IL A T + ++ +F++D R+GL P D + +LRK +P
Sbjct: 59 GGFEPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTG---RP 114
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYM 295
I + +NK E + AA+ LG GDP A+SA G G+TE+ EAL
Sbjct: 115 IFLVVNKSEGM-----KYTSVAADFYELGLGDPRAVSAAHGDGVTEMINEAL-------- 161
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
D D +++++ +++AIVGRPNVGKSTL+N L+ EDRV+
Sbjct: 162 -----DVAYAGQPEESD-----EEKAQHGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDM 211
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
G TRDS+ V FE QG+ L+DTAG +R K + SV+++ +++ A+VV L+LD
Sbjct: 212 PGTTRDSIYVDFERQGKKYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLD 271
Query: 415 AEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + + VE+GR LVV VNK D L V+E ++Q + +
Sbjct: 272 ARQDISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLQRKLKFL 323
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQP 523
F SA E G +M V D Y+ +LPT +L R L V + + +P
Sbjct: 324 EFAKFHFISAAEKTGIGPLMRSVDDAYKAAMTKLPTPKLTRALIEAVEFQQPRRRGPVRP 383
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 384 KLRYAHQGGQNPPIIVIHGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRS 437
>gi|296136228|ref|YP_003643470.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
gi|295796350|gb|ADG31140.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
Length = 457
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 242/475 (50%), Gaps = 43/475 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P V ++GRPNVGKS LFNR+ R R+A+V + P +TRD G+ ++ D V+D+
Sbjct: 1 MTPIVSLVGRPNVGKSTLFNRMTRSRDAIVADMPG--LTRDRHYGMLRMADRPVIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E +G I+ + A T +A++ +F++D+R+GL P DL + LRK KPI
Sbjct: 59 GFEPVVDTG-IVHQMARQTRQAIAESDLVVFLVDLRTGLSPQDLHIAAELRKTG---KPI 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK E H A AE LG G+P +ISA G + P + D +L+
Sbjct: 115 LLAVNKAEGRHG-----HAALAEFHELGLGEPFSISAAHGDSV--------PDLLDRILQ 161
Query: 298 VLNDSCTQNNSSTQ---DVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
L ++ T+ +V + + L+LAI GRPNVGKSTL+NAL+ E+RV+
Sbjct: 162 ALPSEPSEGIPETEAASEVAAETTKPREHSLRLAIAGRPNVGKSTLVNALVGEERVIAFD 221
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ V FE GR L+DTAG ++ K + SV+++ + + +A+VV L+L
Sbjct: 222 MPGTTRDAIEVPFERDGRKFILIDTAGLRRKGKVFEAVEKFSVIKTLQAIEQANVVVLLL 281
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E AVE GR LV+ NK D + Y R + V I+ +P
Sbjct: 282 DATEGVSDQDAHIASFAVEAGRALVLAANKWDAVD------TYGRERLMV--AIRQRLPF 333
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQ 522
V+ SA G G +M VI + +LPT +L R + V + + +
Sbjct: 334 VSFAKFHSISARTGSGLNGLMKSVIAAHAAAYRKLPTPKLTRAIIEAVAQQQPPRSGPVR 393
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + S + R+L L+E FDL G P+R+ RS
Sbjct: 394 PKLRYAHQGGTNPPIIIIHGSALDRVPATYTRYLEGQLREKFDLTGTPLRVEYRS 448
>gi|73667142|ref|YP_303158.1| GTP-binding protein EngA [Ehrlichia canis str. Jake]
gi|72394283|gb|AAZ68560.1| Small GTP-binding protein domain:GTP-binding domain [Ehrlichia
canis str. Jake]
Length = 439
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 249/476 (52%), Gaps = 72/476 (15%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PNVGKS +FNRL ++ A+V NTP+ +TRD REG A L L+FKV+D+ G+
Sbjct: 4 IAIVGLPNVGKSTIFNRLTNQKSAIVSNTPN--LTRDRREGNADLCGLKFKVIDTGGV-- 59
Query: 183 EATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAPQI 235
D T ++A VL + + AI F++D + +LE K+LRK
Sbjct: 60 --------DNTIKLSALVLGQVKLAIEGCDIVFFVVDAKVEQDDKNLEFAKYLRKSTQ-- 109
Query: 236 KPIVAM-NKCESLHNG-TGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
KP++ + NKCES T G F P+ ISAE LG+ +LYE L P V +
Sbjct: 110 KPVILVANKCESQKKCYTVDYLGH------FDFIGPVYISAEHNLGLIDLYEVLLPFVGE 163
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ L +L ++L+IVGRPN GKST +N+LL E R++V
Sbjct: 164 HDLDILKSD---------------------NIRLSIVGRPNAGKSTFVNSLLGESRMIVS 202
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVAL 411
PEAG TRDS+ + ++Y+ + L+DTAG ++ K E+ S SV ++ ++ R+ +V L
Sbjct: 203 PEAGTTRDSIDIEYQYKDQMFTLIDTAGMRKKAKVIEEIEVS-SVHKTIGSINRSDIVVL 261
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V+D+ +++ A++ G+ L+V +NK D+++ + S L K + +
Sbjct: 262 VIDSVYGIEQQDLYIADLAIQNGKALIVALNKWDMIARKDRSELLKDICNYNKLNFE--- 318
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
+P+V SAL+ V+ + I Y+ +R+ T LN+WL+ + H
Sbjct: 319 -----VPIVEISALKNINCNKVIDKSIGLYKYLKMRISTPMLNKWLKLAVDYHKPPLFHG 373
Query: 522 Q-PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY TQV+ PP F+ ++ + ++L +SL++ F + IPI++ +
Sbjct: 374 KVVKLKYITQVRVMPPAFIIVVNNLNAIDLTYQQYLMRSLRKHFSINEIPIKLNLK 429
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
L++AIVG PNVGKST+ N L + +V LTRD + + G ++DT G
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTNQKSAIVSNTPNLTRDRREGNADLCGLKFKVIDTGG 58
>gi|352096373|ref|ZP_08957253.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
gi|351677067|gb|EHA60218.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
Length = 455
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 237/474 (50%), Gaps = 59/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L LA+ A+ ++D + GL D + +WLR Q K ++A
Sbjct: 62 VFDDDS-EFLPEIREQAGLALAEASVALVIVDGQQGLTAADESIAEWLRTQ--QCKTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLA----MAAEFWRLGLGEPHPISAIHGAGTAELL--------DQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D+ES + P+QL+I+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDEESDEEEPIQLSIIGRPNVGKSSLLNAICGETRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E + R L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTRIERENRPWRLIDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A+ +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMT------AMEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++ Y TQV +RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 GRLYYGTQVASRPPSFTLFVNEPKLFGDTYRRYVERQIREGLGFDGTPVKLFWR 436
>gi|350544506|ref|ZP_08914103.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
gi|350527722|emb|CCD37535.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
Length = 463
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 243/471 (51%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAG 179
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G R + V+D+ G
Sbjct: 20 PVIALVGRPNVGKSTLFNRLTRSRDALVAHLPG--LTRDRHYGEGRMGGERPYLVVDTGG 77
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E A G IL A T + + +F++D R+GL P D + +LRK +P+
Sbjct: 78 FEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPLF 133
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E + A++ LG GDP AISA G G+ E+
Sbjct: 134 LVVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVVEM--------------- 173
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ND+ + + T E+++++ +++AIVGRPNVGKSTL+N L+ E+RV+ G
Sbjct: 174 INDALDIAYADQPEET--EEEKAQHGIKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGT 231
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE QGR L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 232 TRDSIYVDFERQGRKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQ 291
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 292 DISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKADLTRKLKFLDFA 343
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SALE G A+M V + Y ++LPT +L R L V + + +PK++
Sbjct: 344 KFHYVSALEKTGIGALMKSVDEAYAAAMVKLPTPKLTRALIDAVEFQQPRRRGPVRPKLR 403
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 404 YAHQGGQNPPIIVVHGNALDAVTDTYKRYLEGRFRETFGLAGTPLRIEFRS 454
>gi|113954294|ref|YP_729814.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
gi|123031842|sp|Q0ICK8.1|DER_SYNS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113881645|gb|ABI46603.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
Length = 455
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 238/474 (50%), Gaps = 59/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L + LA+ A+ ++D + GL D + +WLR K ++A
Sbjct: 62 VFDDDS-EFLPEIREQASLALAEASVALVIVDGQQGLTAADESIAEWLRTQ--NCKTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G G AAE LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLG----MAAEFWRLGLGEPHPISAIHGAGTAELL--------DQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D+ES + P+QL+I+GRPNVGKS+LLN++ E R +V P G
Sbjct: 166 --------------PPKDEESDEEEPIQLSIIGRPNVGKSSLLNSICGETRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E + R L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTRIERENRRWRLIDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A+ +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMT------AMEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++ Y TQV +RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 GRLYYGTQVASRPPSFTLFVNEPKLFGDTYRRYVERQIREGLGFDGTPVKLFWR 436
>gi|405374854|ref|ZP_11029148.1| GTP-binding protein EngA [Chondromyces apiculatus DSM 436]
gi|397086522|gb|EJJ17625.1| GTP-binding protein EngA [Myxococcus sp. (contaminant ex DSM 436)]
Length = 459
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 239/473 (50%), Gaps = 47/473 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL RR ALV + P VTRD A+ +F +D+ G
Sbjct: 3 PLVAIVGRPNVGKSTLFNRLAGRRLALVQDEP--GVTRDRHYADAEWEGRKFTFIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+L + + + +F+ D R+GL D V +LRK KP+V
Sbjct: 61 -VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVANFLRKSG---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A NK L TG + A E LG GD A+SAE GLGM EL++A+ +
Sbjct: 117 AANK---LDTTTGQMLALAGEFYRLGLGDVQALSAEHGLGMQELFDAVTAKLP------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+D +P DD +++AI+GRPN GKSTL+NA+L+E RV+ AG T
Sbjct: 167 ------PKEEGEDEEAPPDDGL---IRMAIIGRPNAGKSTLVNAILKEKRVVASEVAGTT 217
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD V Y+GR + L DTAG ++R+K + SV+ + K + R+ V L++DA E
Sbjct: 218 RDPVDSELTYKGRKIVLTDTAG-IRRKKSIAQRVEQFSVIAALKAMERSDVAVLLMDATE 276
Query: 418 VR----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GR LV++VNK DL+ Q R +E + ++ + V
Sbjct: 277 PAVDQDAKLAGLAEERGRALVIVVNKWDLVGADQ------RRQETYRESLKYALKFVGYA 330
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++FTSAL G V+ + +++ R PT +LNR L ++ + +P ++
Sbjct: 331 PILFTSALTGSKVEKVVDVATELAEQFRFRAPTPQLNRLLEHMVDNNPAPIVRGKPLRLY 390
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
Y QV A PPTF ++ + + D R++T L++ FDL +PIR+ + P
Sbjct: 391 YIAQVAAAPPTFALTVNHPEGVPDMYKRYITNQLRKTFDL-RVPIRLIFKGRP 442
>gi|186476174|ref|YP_001857644.1| GTP-binding protein EngA [Burkholderia phymatum STM815]
gi|238691310|sp|B2JIU7.1|DER_BURP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|184192633|gb|ACC70598.1| small GTP-binding protein [Burkholderia phymatum STM815]
Length = 446
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 240/472 (50%), Gaps = 52/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDSAG 179
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G R + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI
Sbjct: 61 FEPVAKDG-ILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTG---RPIF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLR 297
+ +NK E + AA+ LG GDP AISA G G+TE+ EAL
Sbjct: 117 LVVNKAEGM-----KYTNVAADFYELGLGDPRAISAAHGDGVTEMINEAL---------- 161
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D D +++++ +++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 162 ---DVAYAGQPEESD-----EEKAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPG 213
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE QG+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 214 TTRDSIYVDFERQGKKYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDAR 273
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + VE+GR LVV VNK D L V+E ++Q + +
Sbjct: 274 QDISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKSDLQRKLKFLEF 325
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
F SA E G +M V D Y+ +LPT +L R L V + + +PK+
Sbjct: 326 AKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKL 385
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 386 RYAHQGGQNPPIIVIHGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRS 437
>gi|108759687|ref|YP_631948.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622]
gi|122981004|sp|Q1D5X5.1|DER_MYXXD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|108463567|gb|ABF88752.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622]
Length = 459
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 239/473 (50%), Gaps = 47/473 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL+ RR ALV + P VTRD A+ +F +D+ G
Sbjct: 3 PLVAIVGRPNVGKSTLFNRLVGRRIALVQDEP--GVTRDRHYADAEWEGRQFTFIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+L + + + +F+ D R+GL D V +LRK KP+V
Sbjct: 61 -VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVANYLRKSG---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A NK L N +G + A E LG GD A+SAE GLGM EL++++ +
Sbjct: 117 AANK---LDNTSGQMQALAGEFYRLGLGDVQALSAEHGLGMQELFDSVVARLP------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+D +P DD ++LAI+GRPNVGKSTL+NA+L+E RV+ AG T
Sbjct: 167 ------PKEEGEDAEAPPDDGI---IRLAIIGRPNVGKSTLVNAILKEKRVVASDVAGTT 217
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD V Y+ R + L DTAG ++R+K + SV+ + K + R+ V L++DA E
Sbjct: 218 RDPVDSELTYKDRKLLLTDTAG-IRRKKSIAQRVEQFSVVAALKVMERSDVAVLLMDATE 276
Query: 418 VR----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GR LV++VNK DL+ Q R +E + ++ + V
Sbjct: 277 PAVDQDAKLAGLAEERGRALVIVVNKWDLVGADQ------RRQETYRESLKHSLKFVGYA 330
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++FTSAL G V+ + ++ R PT +LNR L ++ H +P ++
Sbjct: 331 PILFTSALTGSKVEKVVDVATELADQFRFRAPTPQLNRLLDHMVDNHPAPIVRGKPLRMY 390
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
Y QV A PPTF ++ + D R++T L++ FDL +PIR+ + P
Sbjct: 391 YIAQVAAAPPTFTITVNHPDGVPDMYKRYITNQLRKTFDL-RVPIRLIFKGRP 442
>gi|340787109|ref|YP_004752574.1| GTP-binding protein [Collimonas fungivorans Ter331]
gi|340552376|gb|AEK61751.1| GTP-binding protein [Collimonas fungivorans Ter331]
Length = 447
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 239/469 (50%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T +A+ IF++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKDG-IMHEMAKQTKQAVAEADIVIFIVDGRQGLTPHDKTITDFLRKSGRSV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + AE LG GDP ISA G G+T+L E L+
Sbjct: 118 VNKSEGM-----KYTSVTAEFYELGMGDPYVISAAHGDGVTDLVE-----------ESLD 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ +Q S PE ++ + +++AIVGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 162 LAFSQRPSE-----EPEPEDKERGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DSIEIPFERDGKKYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L+ + ++ + ++ + ++
Sbjct: 277 SEQDAHIAGFVLETGRALVVGVNKWDGLTSDR--------RDEIKMDMDRKLNFLSFAKF 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYF 528
F SAL+ G +M + Y L T +L R L V + + S +PK++Y
Sbjct: 329 HFISALKSTGITPLMKSIDSAYAAAMSNLTTPKLTRALIEAVEHQQPRRKGSIRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ D R+L K +E F L G P+RI RS
Sbjct: 389 HQGGMNPPIVVIHGNALESIEDNYKRYLEKHFRETFSLVGTPLRIEFRS 437
>gi|254493337|ref|ZP_05106508.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
gi|268598604|ref|ZP_06132771.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
gi|268600957|ref|ZP_06135124.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
gi|268603264|ref|ZP_06137431.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
gi|268681744|ref|ZP_06148606.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
gi|268683971|ref|ZP_06150833.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
gi|268686216|ref|ZP_06153078.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
gi|226512377|gb|EEH61722.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
gi|268582735|gb|EEZ47411.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
gi|268585088|gb|EEZ49764.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
gi|268587395|gb|EEZ52071.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
gi|268622028|gb|EEZ54428.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
gi|268624255|gb|EEZ56655.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
gi|268626500|gb|EEZ58900.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
Length = 500
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 245/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ +IGRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 9 LTQKDPIMKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 66
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 67 YFVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 125
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G A AAE L G+P IS G G+ L E +
Sbjct: 126 P---RPVYLAVNKGEG-----GDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI--- 174
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E
Sbjct: 175 -------------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEK 214
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 215 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 274
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 275 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 326
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ +GR
Sbjct: 327 SRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPP 386
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 387 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 443
>gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
Length = 445
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 241/470 (51%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G+T++ +
Sbjct: 117 VVNKAEGM-----KYTNVAADFYELGLGDPRAISAAHGDGVTDM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + Q S ED E++ +++AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 157 NEAL-EVAYAGQPEESEEDKEAR-GVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERNGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E +++ + +
Sbjct: 275 ISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLERKLKFLDFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G +M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGPLMRSVDDAYTAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAITDTYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|304387839|ref|ZP_07370013.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
gi|304338104|gb|EFM04240.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
Length = 536
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 247/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 206
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
+ED + + PE +E+ K P+ A++GRPNVGKSTL+NA+L E+
Sbjct: 207 IEDIL---------------ETFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEE 250
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 251 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 310
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 311 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 362
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 363 NRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPP 422
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 423 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|34498989|ref|NP_903204.1| GTP-binding protein EngA [Chromobacterium violaceum ATCC 12472]
gi|41017007|sp|Q7NS92.1|DER_CHRVO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|34104839|gb|AAQ61196.1| probable GTP-binding protein [Chromobacterium violaceum ATCC 12472]
Length = 469
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 244/472 (51%), Gaps = 54/472 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PTV ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPG--LTRDRHYGQGRVGEKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E G IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDEG-ILFEMAKQTLQAVDEADAVVFLVDGRAGLTPQDKIIANRLRQLD---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E + + A A AE L G+P+ ISA G G+ EL E + D +
Sbjct: 115 FLAVNKAEGMKH-----AIAGAEFHELALGEPLVISAAHGDGVRELMELVLEGFPDEV-- 167
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
E+++S+ P + A++GRPNVGKSTL+NA+L E+RV+ +AG
Sbjct: 168 -------------------EEEDSRHP-KFAVIGRPNVGKSTLVNAILGEERVIAFDQAG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G T ++DTAG +R K + SV+++ K + A+V LVLDA+
Sbjct: 208 TTRDSIYIDFEREGHTYTIIDTAGVRRRAKVNEMLEKFSVIKTMKAIEDANVAVLVLDAQ 267
Query: 417 ----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
A+E GR LVV VNK D L G Q KE V +EI + +
Sbjct: 268 LDISEQDATIAGFALEAGRALVVAVNKWDNLDGEQ--------KENVRREIARKLNFLDF 319
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
+ SA+EGRG + + + Y+ +L T +L R L+ + R + +PK+
Sbjct: 320 AKFHYISAIEGRGVADLFKSIDEAYRAAMSKLATPKLTRVLQVALERQQPPRSGLIRPKM 379
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + ++ + R+L + ++ F L G P+R+ +S
Sbjct: 380 RYAHQGGQNPPVIVVHGNALDSIPASYTRYLEHTFRKVFKLQGTPLRVQYKS 431
>gi|268594476|ref|ZP_06128643.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
gi|268596471|ref|ZP_06130638.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
gi|291044231|ref|ZP_06569940.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
gi|293399430|ref|ZP_06643583.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
gi|268547865|gb|EEZ43283.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
gi|268550259|gb|EEZ45278.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
gi|291011125|gb|EFE03121.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
gi|291609999|gb|EFF39121.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
Length = 502
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 245/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ +IGRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 11 LTQKDPIMKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 68
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 69 YFVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 127
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G A AAE L G+P IS G G+ L E +
Sbjct: 128 P---RPVYLAVNKGEG-----GDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI--- 176
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E
Sbjct: 177 -------------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEK 216
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 217 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 276
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 277 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 328
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ +GR
Sbjct: 329 SRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPP 388
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 389 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 445
>gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407714021|ref|YP_006834586.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407236205|gb|AFT86404.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
Length = 445
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 240/472 (50%), Gaps = 53/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKVIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + + AA+ LG GDP AISA G G+TE+ +
Sbjct: 117 VVNKAEGM-----KYSAVAADFYELGLGDPRAISAAHGDGVTEM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
N++ + + E DE K +++AIVGRPNVGKSTL+NAL+ E+RV+ G
Sbjct: 157 NEALGVAYAGQPE----ESDEEKAAHGIKIAIVGRPNVGKSTLINALVGEERVIAFDMPG 212
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE QG+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 213 TTRDSIYVDFERQGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAR 272
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + VE+GR LVV VNK D L V+E +++ + +
Sbjct: 273 QDISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDSHVRERTKADLERKLKFLDF 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
F SA E G +M V D Y +LPT +L R L V + + +PK+
Sbjct: 325 AKFHFISAAEKTGIGPLMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKL 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 385 RYAHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|254670450|emb|CBA06089.1| putative GTP-binding protein [Neisseria meningitidis alpha153]
Length = 536
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 246/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDPIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI--- 210
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+
Sbjct: 211 -------------------LENFPEPEVEEADAKHPV-FAVIGRPNVGKSTLVNAILGEE 250
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 251 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 310
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 311 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 362
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 363 NRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPP 422
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 423 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|416213868|ref|ZP_11622561.1| GTP-binding protein [Neisseria meningitidis M01-240013]
gi|325144121|gb|EGC66428.1| GTP-binding protein [Neisseria meningitidis M01-240013]
Length = 536
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 246/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDPIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI--- 210
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+
Sbjct: 211 -------------------LENFPEPEVEEADAKHPV-FAVIGRPNVGKSTLVNAILGEE 250
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 251 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 310
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 311 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 362
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 363 NRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPP 422
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 423 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|421747045|ref|ZP_16184794.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
gi|409774363|gb|EKN55994.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
Length = 447
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 239/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + D + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRGADRPYIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P DL + +LRK ++ ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDLVIADYLRKTGRRV--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G+ EL E AL +VE
Sbjct: 118 VNKAEGM-----KYTAVAADFYELGMGDPYAISATHGDGVRELVEEALEAAVE------- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ PED ++ ++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 166 ---------QRPELAEPEDQNTR-GTKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G ++ + ++Q + +
Sbjct: 276 VSEQDAHIAGFIVESGRALVVGVNKWDGLDG--------HTRDRIKHDLQRKLQFLDFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
F SA E G ++ V + Y L++PT +L R L + + A +PK++Y
Sbjct: 328 FHFISARERTGIGPLLRSVDEAYAAAMLKMPTPKLTRVLHDAVAFQQPRRVGATRPKMRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL + F+L G P+RI R+
Sbjct: 388 AHQGGSNPPIIVVHGNSLNAVPETYRRFLEGRFRAAFNLKGTPLRIEFRT 437
>gi|416188151|ref|ZP_11614620.1| GTP-binding protein [Neisseria meningitidis M0579]
gi|325135934|gb|EGC58544.1| GTP-binding protein [Neisseria meningitidis M0579]
Length = 536
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 247/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDPIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 206
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
+ED + + PE +E+ K P+ A++GRPNVGKSTL+NA+L E+
Sbjct: 207 IEDIL---------------ETFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEE 250
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 251 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 310
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 311 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 362
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 363 NRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPP 422
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 423 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|348618426|ref|ZP_08884952.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
BEG34]
gi|347816302|emb|CCD29695.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
BEG34]
Length = 449
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 237/470 (50%), Gaps = 43/470 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + TRD G + G + ++D+ G
Sbjct: 3 PVITLVGRPNVGKSTLFNRLTRSRDALVADFAG--TTRDRHYGEGRAGSRPYWIVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G I+ + A T + ++ +F++D R GL P D + WLRK +P+ V
Sbjct: 61 EPAARRG-IIRQMAQQTRQAVDESDCILFIVDARQGLTPQDEWIAAWLRKTG---RPLCV 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E G + AA+ LG G+ ISA G G++ + EA L
Sbjct: 117 ILNKAE----GNAAAYVLAADFYALGLGELHPISAAHGNGVSAMIEA-----------AL 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+C Q + D +D +++A+ GRPNVGKSTL+NALL E+RV+ G T
Sbjct: 162 EAAC-QGREAQTDTEEEGEDRQGRGIRIAVAGRPNVGKSTLINALLGEERVIASDAPGTT 220
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-EE 417
RDS+ + F++QGR L+DTAG +R + + SV+++ +++ AHVV L+LDA +E
Sbjct: 221 RDSIAIDFQWQGRDYQLIDTAGVRRRARVSEAIEKFSVIKTMQSIAAAHVVVLLLDARQE 280
Query: 418 VR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LV+ VNK D L Q +R K A+ ++ +P +
Sbjct: 281 ISEQDAHLAGFVVEQGRALVIGVNKWDGLDSYQR----ERAKVALRRK----LPFLDFAE 332
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKY 527
F SAL G +M V YQ +LPT +L LR G + +PK++Y
Sbjct: 333 FHFISALRKTGLEPLMRSVDAAYQAGMCKLPTPKLTLALRAAAGFQPPRRSGLIRPKLRY 392
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + L+ A R+L K + F L G P+R+ R+
Sbjct: 393 AHQGGHNPPAIVIHGNALDALTPAYQRYLEKRFRAAFPLVGTPLRLILRT 442
>gi|161869787|ref|YP_001598955.1| GTP-binding protein EngA [Neisseria meningitidis 053442]
gi|161595340|gb|ABX73000.1| GTP-binding protein engA [Neisseria meningitidis 053442]
Length = 536
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 247/477 (51%), Gaps = 57/477 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDPIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 206
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQED 348
+ED + + PE +E+ K P+ A++GRPNVGKSTL+NA+L E+
Sbjct: 207 IEDIL---------------ETFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEE 250
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+
Sbjct: 251 RVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAAN 310
Query: 408 VVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
V LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 311 VAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDI 362
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 363 NRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPP 422
Query: 518 DQS-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 423 RAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|421537871|ref|ZP_15984053.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
gi|402317908|gb|EJU53435.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
Length = 485
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 244/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFERKGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG ++ + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDSLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|86608739|ref|YP_477501.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502588|sp|Q2JM09.1|DER_SYNJB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86557281|gb|ABD02238.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 459
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 234/470 (49%), Gaps = 47/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NR+ R A+V++ P VTRD + R +V+D+ G
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPG--VTRDRLYQEVEWNGRRLRVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L L +A+ Q IF++D R GL P D+EV WLRK + +V
Sbjct: 61 L-VFGDDSEFLPHIRQQAMAAMAEAQAVIFVVDGREGLTPADVEVADWLRKQPLPV--VV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G LA AAA LG GDPI S G G+ EL EA+
Sbjct: 118 AVNKCES---GQMGLAQAAA-FWELGLGDPIPCSGIHGNGVAELLEAVL----------- 162
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ +VT+ E P+ ++IVGRPNVGKS+LLN L+ +R +V P +G T
Sbjct: 163 --------AHLPEVTAEAAGEPD-PIAVSIVGRPNVGKSSLLNRLVGSERAIVSPISGTT 213
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ ++G+ L+DTAG ++ + + G S+ ++ K + R+ V LV+DA E
Sbjct: 214 RDAIDTVVTWEGQPYRLIDTAGIRKKNRVQYGIEFFSINRAFKAIQRSDAVLLVIDALEG 273
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R EEGR VV+VNK D + + + + + EI+ + + P
Sbjct: 274 VTEQDQRLAGRIEEEGRACVVVVNKWDAVENKDTHTINEFTR-----EIRDRLYFIEWAP 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
++F SAL G+ + QV R+PT+ +N L+ + S Q Q +I
Sbjct: 329 LLFVSALTGQRTHKIFEQVNTVVAAHRKRVPTAVVNEVLQDALAWQSPPTNRQGKQGRIY 388
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV RPPTFV F++ D RFL K +++ D G PIR R
Sbjct: 389 YGTQVADRPPTFVLFVNDPDLFKDNYRRFLEKHFRQNLDFTGTPIRFLWR 438
>gi|416172242|ref|ZP_11608722.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
gi|325130014|gb|EGC52808.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
Length = 485
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|421548595|ref|ZP_15994620.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
gi|402326256|gb|EJU61661.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
Length = 485
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|194098169|ref|YP_002001217.1| GTP-binding protein EngA [Neisseria gonorrhoeae NCCP11945]
gi|240013743|ref|ZP_04720656.1| GTP-binding protein EngA [Neisseria gonorrhoeae DGI18]
gi|240016181|ref|ZP_04722721.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA6140]
gi|240120813|ref|ZP_04733775.1| GTP-binding protein EngA [Neisseria gonorrhoeae PID24-1]
gi|385335350|ref|YP_005889297.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
gi|238690187|sp|B4RKD2.1|DER_NEIG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193933459|gb|ACF29283.1| essential Gc protein [Neisseria gonorrhoeae NCCP11945]
gi|317163893|gb|ADV07434.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 485
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 242/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ +IGRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYFVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEKRVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDISRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ +GR +P
Sbjct: 319 DFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|416938396|ref|ZP_11934270.1| GTP-binding protein Der [Burkholderia sp. TJI49]
gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49]
Length = 445
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 240/476 (50%), Gaps = 57/476 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKTIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL + D
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAD--- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
PE+++ P +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 167 ------------------QPEEEDENDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAF 208
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALV 412
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+
Sbjct: 209 DMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILL 268
Query: 413 LDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA++ + VE+GR LV+ VNK D L + +E ++ +
Sbjct: 269 LDAQQDISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHARERAKADLTRKLK 320
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSA 521
+ F SA + G A+M V D Y +LPT +L R L V + +
Sbjct: 321 FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPV 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+PK++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 381 RPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|297559956|ref|YP_003678930.1| ribosome-associated GTPase EngA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844404|gb|ADH66424.1| ribosome-associated GTPase EngA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 478
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 250/494 (50%), Gaps = 69/494 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V ++GRPNVGKS+L NR+I RREA+V + P VTRD A+ + RF ++D+ G
Sbjct: 22 LPVVAVVGRPNVGKSSLVNRIIGRREAVVEDVP--GVTRDRVAYDAEWQNTRFTLVDTGG 79
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFA-------IFMIDVRSGLHPLDLEVGKWLRKHA 232
ET + G+ A V + ++A +F++D G+ D V + LR
Sbjct: 80 WETSVS---------GLAAMVARQAEYAAQTADVILFVVDATVGVTDADAAVTRVLRSTK 130
Query: 233 PQIKPIV-AMNKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPS 290
+P+V A NK + GS+ A A L LG G P ISA G G +L +AL
Sbjct: 131 ---RPVVLAANKVD------GSMQEADALDLWQLGVGQPFPISALHGRGTGDLLDAL--- 178
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
V ++ + L + EDD P ++A++GRPNVGKS+LLN L EDRV
Sbjct: 179 VAEFPEQPLGE---------------EDDGEDGPPRIALLGRPNVGKSSLLNRLAGEDRV 223
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVV 409
+V AG TRD+V E G+T +DTAG +R + +G + M++ L RA
Sbjct: 224 VVDAVAGTTRDAVDELIELGGKTWKFIDTAGIRRRFRALQGADYYATMRTGTALERAEAA 283
Query: 410 ALVLDAEE------VRAVEE----GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
+++D E +R VE+ GRGLV+ NK D+L + + L K EI
Sbjct: 284 VVLMDVSEPLAEQDIRVVEQVVEAGRGLVLAFNKWDILDEERRTYLEK--------EIDR 335
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ +V+ P V SA GR ++ + + W R+PT +LN WL++++ +
Sbjct: 336 QLARVSWAPRVNVSAKTGRHMEKLVPAIETSLSGWNQRIPTGQLNNWLKELVAATPPPVR 395
Query: 520 SA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV 578
QPKI + TQ +RPP FV F +G L D RF+ + L+EDF G P+ I+ R
Sbjct: 396 GGKQPKILFATQAGSRPPHFVLFTTG--FLEDNYRRFIERRLREDFGFEGSPVHISMRIR 453
Query: 579 PRKCGSSSSRQNTG 592
+K G + R + G
Sbjct: 454 EKKGGGAQGRASKG 467
>gi|385209022|ref|ZP_10035890.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
gi|385181360|gb|EIF30636.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
Length = 445
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 239/470 (50%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + T AA+ LG GDP AISA G G+TE+ + L V
Sbjct: 117 VVNKAEGMKYST-----VAADFYELGLGDPRAISAAHGDGVTEMI--------NEALEVA 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ N +D+++ +++AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 164 YAGQPEEN---------DDEKAARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E +++ + +
Sbjct: 275 ISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLERKLKFLDFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G +M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGPLMRSVDDAYAAAMAKLPTPKLTRALIDAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|410694038|ref|YP_003624660.1| GTPase involved in ribosome synthesis and maintenance [Thiomonas
sp. 3As]
gi|294340463|emb|CAZ88844.1| GTPase involved in ribosome synthesis and maintenance [Thiomonas
sp. 3As]
Length = 465
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 243/475 (51%), Gaps = 35/475 (7%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P V ++GRPNVGKS LFNR+ R R+A+V + P +TRD G+ ++ D V+D+
Sbjct: 1 MTPIVSLVGRPNVGKSTLFNRMTRSRDAIVADMPG--LTRDRHYGMLRMADRPVIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E +G I+ + A T +A++ +F++D+R+GL P DL + LRK KPI
Sbjct: 59 GFEPVVDTG-IVHQMARQTRQAIAESDLVVFLVDLRTGLSPQDLHIAAELRKTG---KPI 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK E H A AE LG G+P +ISA G + +L + + ++
Sbjct: 115 LLAVNKAEGRHGHP-----ALAEFHELGLGEPFSISAAHGDSVPDLLDRILQALPSEPSE 169
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESK---LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ ++ + + + P + +K L+LAI GRPNVGKSTL+NAL+ E+RV+
Sbjct: 170 GIPETEAASEVAAETAPDPGAETTKPREHSLRLAIAGRPNVGKSTLVNALVGEERVIAFD 229
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ V FE GR L+DTAG ++ K + SV+++ + + +A+VV L+L
Sbjct: 230 MPGTTRDAIEVPFERDGRKFILIDTAGLRRKGKVFEAVEKFSVIKTLQAIEQANVVVLLL 289
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E AVE GR LV+ NK D + Y R + V I+ +P
Sbjct: 290 DATEGVSDQDAHIASFAVEAGRALVLAANKWDAVD------TYGRERLMV--AIRQRLPF 341
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW-LRKVMGRHSWKDQSAQ 522
V+ SA G G +M V+ + +LPT +L R + V + + +
Sbjct: 342 VSFAKFHSISARTGSGLNGLMKSVVAAHAAAYRKLPTPKLTRAIIEAVAQQQPPRSGPVR 401
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + S + R+L L+E FDL G P+R+ RS
Sbjct: 402 PKLRYAHQGGTNPPIIIIHGSALDRVPATYTRYLEGQLREKFDLTGTPLRVEYRS 456
>gi|254804723|ref|YP_003082944.1| GTP-binding protein EngA [Neisseria meningitidis alpha14]
gi|416177695|ref|ZP_11610064.1| GTP-binding protein [Neisseria meningitidis M6190]
gi|416192597|ref|ZP_11616703.1| GTP-binding protein [Neisseria meningitidis ES14902]
gi|421544217|ref|ZP_15990295.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
gi|421546327|ref|ZP_15992376.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
gi|421552621|ref|ZP_15998595.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
gi|421561020|ref|ZP_16006873.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
gi|421567289|ref|ZP_16013025.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
gi|433492340|ref|ZP_20449434.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
gi|433502681|ref|ZP_20459646.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
gi|254668265|emb|CBA05137.1| putative GTP-binding protein [Neisseria meningitidis alpha14]
gi|254673335|emb|CBA08527.1| putative GTP-binding protein [Neisseria meningitidis alpha275]
gi|325132265|gb|EGC54958.1| GTP-binding protein [Neisseria meningitidis M6190]
gi|325137764|gb|EGC60339.1| GTP-binding protein [Neisseria meningitidis ES14902]
gi|402324062|gb|EJU59500.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
gi|402324329|gb|EJU59765.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
gi|402331253|gb|EJU66594.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
gi|402339500|gb|EJU74716.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
gi|402344300|gb|EJU79441.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
gi|432229129|gb|ELK84822.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
gi|432240777|gb|ELK96308.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
Length = 485
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEVEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400]
gi|123168328|sp|Q13X32.1|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400]
Length = 445
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 239/470 (50%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + T AA+ LG GDP AISA G G+TE+ + L V
Sbjct: 117 VVNKAEGMKYST-----VAADFYELGLGDPRAISAAHGDGVTEMI--------NEALEVA 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ N +D+++ +++AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 164 YAGQPEEN---------DDEKAARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E +++ + +
Sbjct: 275 ISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLERKLKFLDFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G +M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGPLMRSVDDAYAAAMAKLPTPKLTRALIDAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|385342155|ref|YP_005896026.1| GTP-binding protein [Neisseria meningitidis M01-240149]
gi|385851494|ref|YP_005898009.1| GTP-binding protein [Neisseria meningitidis M04-240196]
gi|385856998|ref|YP_005903510.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
gi|416162703|ref|ZP_11606805.1| GTP-binding protein [Neisseria meningitidis N1568]
gi|416183658|ref|ZP_11612671.1| GTP-binding protein [Neisseria meningitidis M13399]
gi|433473252|ref|ZP_20430616.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
gi|433481802|ref|ZP_20439067.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
gi|433483787|ref|ZP_20441015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
gi|433485987|ref|ZP_20443188.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
gi|325127951|gb|EGC50852.1| GTP-binding protein [Neisseria meningitidis N1568]
gi|325134015|gb|EGC56670.1| GTP-binding protein [Neisseria meningitidis M13399]
gi|325202361|gb|ADY97815.1| GTP-binding protein [Neisseria meningitidis M01-240149]
gi|325206317|gb|ADZ01770.1| GTP-binding protein [Neisseria meningitidis M04-240196]
gi|325207887|gb|ADZ03339.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
gi|432210853|gb|ELK66809.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
gi|432217633|gb|ELK73501.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
gi|432221490|gb|ELK77300.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
gi|432223033|gb|ELK78815.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
Length = 485
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEVEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|298368463|ref|ZP_06979781.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282466|gb|EFI23953.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
F0314]
Length = 492
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 244/475 (51%), Gaps = 53/475 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D+ + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 1 MTQKDLIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKP 58
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 59 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 117
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L G+P IS G G+
Sbjct: 118 Q---RPVYLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVY--------- 160
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
Y++ + + + + DV P A++GRPNVGKSTL+NA+L E+RV
Sbjct: 161 ---YLIEEILEKFPEPEAEEADVKHP---------VFAVIGRPNVGKSTLVNAILGEERV 208
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V
Sbjct: 209 IAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVA 268
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA++ A+E GR LVV VNK D +S + +E + ++I
Sbjct: 269 VLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQIKRDISR 320
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 321 KLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRA 380
Query: 520 S-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 GLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 435
>gi|385328173|ref|YP_005882476.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
gi|308389025|gb|ADO31345.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
gi|389606059|emb|CCA44972.1| GTP-binding protein engA [Neisseria meningitidis alpha522]
Length = 485
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEVEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFERKGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|121634628|ref|YP_974873.1| GTP-binding protein EngA [Neisseria meningitidis FAM18]
gi|385324412|ref|YP_005878851.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
gi|385339808|ref|YP_005893680.1| GTP-binding protein [Neisseria meningitidis G2136]
gi|385854979|ref|YP_005901492.1| GTP-binding protein [Neisseria meningitidis M01-240355]
gi|416205468|ref|ZP_11620559.1| GTP-binding protein [Neisseria meningitidis 961-5945]
gi|421542253|ref|ZP_15988363.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
gi|421558880|ref|ZP_16004758.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
gi|433466987|ref|ZP_20424444.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
gi|433468993|ref|ZP_20426422.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
gi|433494417|ref|ZP_20451487.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
gi|433496601|ref|ZP_20453642.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
gi|433498661|ref|ZP_20455670.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
gi|433500629|ref|ZP_20457615.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
gi|433536535|ref|ZP_20493043.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
gi|166225830|sp|A1KT93.1|DER_NEIMF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120866334|emb|CAM10076.1| putative GTP-binding protein [Neisseria meningitidis FAM18]
gi|261392799|emb|CAX50375.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
gi|325142105|gb|EGC64531.1| GTP-binding protein [Neisseria meningitidis 961-5945]
gi|325198052|gb|ADY93508.1| GTP-binding protein [Neisseria meningitidis G2136]
gi|325203920|gb|ADY99373.1| GTP-binding protein [Neisseria meningitidis M01-240355]
gi|402318189|gb|EJU53714.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
gi|402337623|gb|EJU72871.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
gi|432203563|gb|ELK59614.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
gi|432205386|gb|ELK61416.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
gi|432231091|gb|ELK86761.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
gi|432234495|gb|ELK90115.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
gi|432235301|gb|ELK90917.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
gi|432235920|gb|ELK91529.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
gi|432274485|gb|ELL29573.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
Length = 485
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E+ ++K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|187478830|ref|YP_786854.1| GTP-binding protein EngA, partial [Bordetella avium 197N]
gi|115423416|emb|CAJ49950.1| GTP-binding protein [Bordetella avium 197N]
Length = 451
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 244/473 (51%), Gaps = 44/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD+ F V+D
Sbjct: 1 VSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADYSG--LTRDRHYGEGRVGDIPFIVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G IL A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDG-ILAEMARQTRQAIAEADVVVFLVDARAGINAHDHEIARLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E ++ G A ++ LG G+P ISA G G+ +L E+
Sbjct: 117 VLLAVNKAEGMNEGK-----ATSDFFELGLGEPHPISAAHGDGVVDLIES---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D ++ E+ E + ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALADLV----PPADEIADAEEGEVQHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMP 216
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 217 GTTRDAIEIEFERDGRQYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 276
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +VV +NK D L Q +E + +E Q + +T
Sbjct: 277 QSEISEQDAHIAGFVLETGRAVVVAINKWDGLDDDQ--------RERIEREFQRKLRFLT 328
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL+G+G ++ V + +L T +L R L+ + + + +PK
Sbjct: 329 FARMHTISALKGQGIRPLLKSVNAAHAAAFAKLSTPKLTRELQAAVEQQQPPRKGIFRPK 388
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP + S + D+ R+L + FDL G P+RI +S
Sbjct: 389 MRYAHQGGQNPPLIIVHGSALDAIPDSYRRYLETRFRNAFDLAGTPLRIEFKS 441
>gi|221198076|ref|ZP_03571122.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
gi|221204366|ref|ZP_03577383.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
gi|221212773|ref|ZP_03585749.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
gi|421470062|ref|ZP_15918471.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
BAA-247]
gi|421478068|ref|ZP_15925839.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
gi|221166986|gb|EED99456.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
gi|221175223|gb|EEE07653.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
gi|221182008|gb|EEE14409.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
gi|400225314|gb|EJO55489.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
gi|400228569|gb|EJO58494.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
BAA-247]
Length = 445
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 239/476 (50%), Gaps = 57/476 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGARPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL + D
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAD--- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
PE+++ P +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 167 ------------------QPEEEDDNDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAF 208
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALV 412
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+
Sbjct: 209 DMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILL 268
Query: 413 LDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA++ + VE+GR LV+ VNK D L + +E ++ +
Sbjct: 269 LDAQQDISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHARERAKADLTRKLK 320
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSA 521
+ F SA + G A+M V D Y +LPT +L R L V + +
Sbjct: 321 FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPV 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+PK++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 381 RPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|187928156|ref|YP_001898643.1| GTP-binding protein EngA [Ralstonia pickettii 12J]
gi|238691801|sp|B2U9V3.1|DER_RALPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187725046|gb|ACD26211.1| small GTP-binding protein [Ralstonia pickettii 12J]
Length = 447
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 240/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADIPG--LTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A++ LG GDP AISA G G+ +L EAL
Sbjct: 118 VNKAEGMR-----YTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DLAFAERPELAEAADAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L+G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLTGHARD----RIKHDMERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA E G A+M V Y ++LPT +L R L + V + + ++PK++Y
Sbjct: 328 VHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLMEAVEYQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL +E F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFREAFQLKGTPLRIEFRT 437
>gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN]
gi|238689579|sp|B2SXS6.1|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN]
Length = 445
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 242/470 (51%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + GD + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRDALVADLPG--LTRDRHYGEGRAGDRPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + + AA+ LG GDP AISA G G+TE+ +
Sbjct: 117 VVNKAEGM-----KYSNVAADFYELGLGDPRAISAAHGDGVTEM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + Q S E+ +++ +++AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 157 NEAL-EVAYAGQPEESDEEKQTR-GVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E +++ + +
Sbjct: 275 ISEQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLERKLKFLDFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G +M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGPLMRSVDDAYAAAMAKLPTPKLTRALIDAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAITETYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|254252261|ref|ZP_04945579.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
gi|124894870|gb|EAY68750.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
Length = 445
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 239/476 (50%), Gaps = 57/476 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGARPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL + D
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAD--- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
PE+++ P +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 167 ------------------QPEEEDDNDPSRGVKIAIVGRPNVGKSTLVNALIGEDRVIAF 208
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALV 412
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+
Sbjct: 209 DMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILL 268
Query: 413 LDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA++ + VE+GR LV+ VNK D L + +E ++ +
Sbjct: 269 LDAQQDISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHARERAKADLTRKLK 320
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSA 521
+ F SA + G A+M V D Y +LPT +L R L V + +
Sbjct: 321 FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPV 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+PK++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 381 RPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|194290002|ref|YP_002005909.1| gtp-binding protein enga [Cupriavidus taiwanensis LMG 19424]
gi|238692737|sp|B3R1J8.1|DER_CUPTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193223837|emb|CAQ69846.1| Ribosome-Associated GTP-binding protein protein [Cupriavidus
taiwanensis LMG 19424]
Length = 447
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 243/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVVKEG-IVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRI--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G+ EL EA+ +V++
Sbjct: 118 VNKAEGM-----KYTSVAADFYELGMGDPYAISAAHGDGVRELVDEAIELAVQE------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ DE K +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 167 ----------RPELAEEASDEGK-GVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRD----RIKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
F SA E G A+M V D Y ++LPT +L R L++ + K A +PK++Y
Sbjct: 328 FHFVSARERTGIGALMRSVDDAYAAAMVKLPTPQLTRVLQEAVEFQQPKRVGASRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + +++ R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIVIHGNALSGVAETYRRYLENRFRAAFKLKGTPLRIEFRT 437
>gi|94986558|ref|YP_594491.1| GTP-binding protein EngA [Lawsonia intracellularis PHE/MN1-00]
gi|442555372|ref|YP_007365197.1| GTP-binding protein EngA [Lawsonia intracellularis N343]
gi|166225821|sp|Q1MS56.1|DER_LAWIP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94730807|emb|CAJ54169.1| predicted GTPases [Lawsonia intracellularis PHE/MN1-00]
gi|441492819|gb|AGC49513.1| GTP-binding protein EngA [Lawsonia intracellularis N343]
Length = 453
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 255/486 (52%), Gaps = 59/486 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAK-LGDLRFKVLDS 177
+LP + ++GRPNVGKS LFNRLIR+ A+ ++ P VTRD EGL + +G F ++D+
Sbjct: 1 MLPKIALVGRPNVGKSTLFNRLIRKNRAITHDRPG--VTRDRMEGLVQSIGHPSFILIDT 58
Query: 178 AG--LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWL 228
G L++ ++ +I+D G ++ + Q AI +++ R GL P D + +L
Sbjct: 59 GGVILDSHYSTINIIDELHGFEKDIFQQVQLAIEESQAICLIVNARDGLLPFDEHLALFL 118
Query: 229 RKHAPQIKPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 287
RK KPI+ A+NK + G AE +LG IA+SAE G + +L L
Sbjct: 119 RKTG---KPILLAVNKVD----GIEKEDQIVAEFHILGLP-MIAVSAEHGHNIRQLENEL 170
Query: 288 RPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQE 347
L + N+ ++ S+ Q L+LAI+GRPN GKS+++NA++ +
Sbjct: 171 S-------LLLPNNENIKDQSTAQAA-----------LKLAIIGRPNAGKSSIINAIIGK 212
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRA 406
++++V AG TRDS+ + F + VDTAG +R K P SV S K+ +A
Sbjct: 213 NKLIVSNIAGTTRDSIDIPFIFNKTQYLFVDTAGIRRRTKITDPVERFSVNASIKSATKA 272
Query: 407 HVVALVLDAEEVRAVEEGRGL----------VVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
++ V+DA E ++ R L ++++NK DL++ +Q + L K KE E
Sbjct: 273 NITLYVIDATEGITAQDKRLLDLLDTRKIPFILLINKTDLIAKKQKTLLSKSFKE----E 328
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+Q P IP++ SA+ G ++ Y + R+ T LNR + +++ RH
Sbjct: 329 LQ-FCPH---IPILMVSAVTSSGLDQIIAMAEQVYLECSTRINTGVLNRAMEEIITRHQP 384
Query: 517 K-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ +PK Y TQ + PPTFV F++ + +S+ +R+L +SL++ F+L PIRI
Sbjct: 385 PVVRRIRPKFFYLTQAETSPPTFVFFVNDAEKISETYVRYLERSLRKIFNLHHAPIRIRL 444
Query: 576 RSVPRK 581
RS +K
Sbjct: 445 RSSHKK 450
>gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu]
Length = 445
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 237/474 (50%), Gaps = 53/474 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK E + A++ LG GDP AISA G G+TE+
Sbjct: 115 FLVVNKSEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTEM-------------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+N++ + + E+DE K ++AIVGRPNVGKSTL+N L+ EDRV+
Sbjct: 156 -INEALGVAYAGQPE----EEDEDKASRGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDM 210
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LD
Sbjct: 211 PGTTRDSIYVDFERNGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLD 270
Query: 415 AEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + + VE+GR LVV VNK D L V+E ++ + +
Sbjct: 271 ARQDISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLTRKLKFL 322
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQP 523
F SA E G +M V D Y +LPT +L R L V + + +P
Sbjct: 323 EFAKFHFISAAEKTGIGPLMRSVDDAYGAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRP 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 383 KLRYAHQGGQNPPVIVIHGNALDAVTDTYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054]
gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424]
gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3]
gi|123370031|sp|Q1BGX0.1|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224312|sp|A0K7T2.1|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238688579|sp|B1JT88.1|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia
AU 1054]
gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3]
Length = 445
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 243/473 (51%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 165 ------------AGQPEEADEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 272 QQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKS 327
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA + G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 328 H----FISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|161723167|ref|YP_442759.2| GTP-binding protein EngA [Burkholderia thailandensis E264]
gi|167581710|ref|ZP_02374584.1| GTP-binding protein EngA [Burkholderia thailandensis TXDOH]
gi|167619826|ref|ZP_02388457.1| GTP-binding protein EngA [Burkholderia thailandensis Bt4]
gi|257138969|ref|ZP_05587231.1| GTP-binding protein EngA [Burkholderia thailandensis E264]
Length = 445
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 237/471 (50%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A++ LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q S E+D + +++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 165 ----AGQPEES-------EEDAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKQYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLEFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
F SA E G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIDAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|452126153|ref|ZP_21938736.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|452129521|ref|ZP_21942096.1| GTP-binding protein Der [Bordetella holmesii H558]
gi|451921248|gb|EMD71393.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|451923156|gb|EMD73298.1| GTP-binding protein Der [Bordetella holmesii H558]
Length = 451
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 242/469 (51%), Gaps = 44/469 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD+ F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADYSG--LTRDRHYGEGRVGDIPFIVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G IL A T +A+ +F++D R+GL+ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDG-ILAEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIARLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E ++ G A +E LG G+P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGMNEGK-----AISEFYELGLGEPHPISAAHGDGIGDLIEV---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D + ++V E D + ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALQDLA----APEEEVEPSEQDGVEHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLP 216
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 217 GTTRDAIEIDFERDGRKYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 276
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +VV +NK D L Q +E + +E Q + ++
Sbjct: 277 QSEISEQDAHIAGFVLETGRAVVVAINKWDGLDDEQ--------RERIEREFQRKLRFLS 328
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL+G+G ++ V + +L T +L R L+ + + + +PK
Sbjct: 329 FARMHTISALKGQGIRPLLKSVNAAHAAAFAKLSTPKLTRELQAAVEQQQPPRKGIFRPK 388
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
++Y Q PP V S + D+ R+L + FDL G P+RI
Sbjct: 389 MRYAHQGGQNPPLIVVHGSALDAIPDSYRRYLETRFRNAFDLAGTPLRI 437
>gi|83652896|gb|ABC36959.1| GTPase family protein [Burkholderia thailandensis E264]
Length = 460
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 238/474 (50%), Gaps = 51/474 (10%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 15 QMKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDT 72
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G E A G IL A T + + +F++D R+GL P D + +LRK +P
Sbjct: 73 GGFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RP 128
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYM 295
I + +NK E + A++ LG GDP AISA G G+T++ EAL +
Sbjct: 129 IFLVVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY---- 179
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
Q S E+D + +++AIVGRPNVGKSTL+N L+ EDRV+
Sbjct: 180 -------AGQPEES-------EEDAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDM 225
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LD
Sbjct: 226 PGTTRDSIYVDFERNGKQYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLD 285
Query: 415 AEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ + VE+GR LVV VNK D L V+E ++ + +
Sbjct: 286 AQQDISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFL 337
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQP 523
F SA E G A+M V D Y +LPT +L R L V + + +P
Sbjct: 338 EFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIDAVEFQQPRRRGPVRP 397
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 398 KLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 451
>gi|15676748|ref|NP_273893.1| GTP-binding protein EngA [Neisseria meningitidis MC58]
gi|385853467|ref|YP_005899981.1| GTP-binding protein [Neisseria meningitidis H44/76]
gi|416197331|ref|ZP_11618541.1| GTP-binding protein [Neisseria meningitidis CU385]
gi|421540026|ref|ZP_15986179.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
gi|427827899|ref|ZP_18994920.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
gi|433464834|ref|ZP_20422319.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
gi|433488083|ref|ZP_20445251.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
gi|433490203|ref|ZP_20447332.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
gi|433504645|ref|ZP_20461585.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
gi|433506871|ref|ZP_20463783.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
gi|433508979|ref|ZP_20465852.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
gi|433511116|ref|ZP_20467948.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
gi|26006741|sp|Q9JZY1.1|DER_NEIMB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|7226088|gb|AAF41263.1| essential GTPase [Neisseria meningitidis MC58]
gi|316984259|gb|EFV63235.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
gi|325140003|gb|EGC62532.1| GTP-binding protein [Neisseria meningitidis CU385]
gi|325200471|gb|ADY95926.1| GTP-binding protein [Neisseria meningitidis H44/76]
gi|402320310|gb|EJU55801.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
gi|432204321|gb|ELK60366.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
gi|432224549|gb|ELK80314.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
gi|432228111|gb|ELK83812.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
gi|432242160|gb|ELK97684.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
gi|432242660|gb|ELK98178.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
gi|432247793|gb|ELL03228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
gi|432248607|gb|ELL04032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
Length = 485
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 244/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ PE +E+ + P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 161 -------------EKFPEPEAEEADARHPV-FAVIGRPNVGKSTLVNAILGEERVITFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|340362433|ref|ZP_08684818.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
gi|339887441|gb|EGQ76997.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
Length = 485
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ Y++
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVY------------YLIE 157
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ ++ ++ + DV P A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 158 KILENFPESEAEEADVKHP---------VFAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQIKRDISRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6]
gi|238689149|sp|B1YR40.1|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6]
Length = 445
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 241/470 (51%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL + A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + A + LG GDP AISA G G+T++ +
Sbjct: 117 VVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + +DD+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G T
Sbjct: 157 NEALEVAYAGQPE--EADDDDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 215 RDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 275 ISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH-- 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
+ SA + G A+M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 329 --YISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPLIVIHGNALDAVTDTYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|398836196|ref|ZP_10593542.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
gi|398213200|gb|EJM99794.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
Length = 446
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 233/469 (49%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMHEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPV--LLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG GDP ISA G G+ +L E VE
Sbjct: 118 VNKSEGM-----KYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALNVVE-------- 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + PE + +++AIVGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 165 --------ANRPEAEPEPEGQVRGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DSIEIPFERDGQQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISDANVVLLLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L Q ++A+ +I + ++
Sbjct: 277 SEQDAHIAGFILESGRALVVGVNKWDGLQSDQ--------RDAIKNDIDRKLNFLSFANT 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYF 528
F SAL+ G VM + Y L T RL R L + V + + S +PK++Y
Sbjct: 329 HFVSALKNSGIGPVMKSINSAYAAATANLSTPRLTRALEQAVEHQQPPRKGSIRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++D R+L K +E F L G P+RI RS
Sbjct: 389 HQGGQNPPVVVIHGNALDAINDNYKRYLEKHFRETFSLVGTPLRIEFRS 437
>gi|255065190|ref|ZP_05317045.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
gi|255050611|gb|EET46075.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
Length = 535
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 243/475 (51%), Gaps = 53/475 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 44 LTQKDPIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKP 101
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 102 YLVIDTGGFEPVVDSG-ILHEMAKQTFQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 160
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L G+P IS G G+
Sbjct: 161 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVY--------- 203
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
Y++ + + + + DV P A++GRPNVGKSTL+NA+L E+RV
Sbjct: 204 ---YLIEEILEKFPEPEAEEADVKHP---------VFAVIGRPNVGKSTLVNAILGEERV 251
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V
Sbjct: 252 IAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVA 311
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA++ A+E GR LVV VNK D +S + +E + ++I
Sbjct: 312 VLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQIKRDISR 363
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 364 KLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRA 423
Query: 520 S-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 424 GLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 478
>gi|444357828|ref|ZP_21159312.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
gi|443605518|gb|ELT73366.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
Length = 445
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 240/473 (50%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 165 ------------AGQPEEAEEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE+GR LV+ VNK D L ++ ++ + +
Sbjct: 272 QQDISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDDHARDHAKADLTRKLKFLD 323
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA + G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 324 FAKSHFISAAKKTGIGALMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|444371762|ref|ZP_21171295.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
gi|443594661|gb|ELT63296.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
Length = 445
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 243/473 (51%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 165 ------------AGQPEEAEEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 272 QQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKS 327
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA + G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 328 H----FISAAKKTGIGALMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 445
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 243/473 (51%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + ++D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 165 ------------AGQPEEADEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 272 QQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKS 327
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA + G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 328 H----FISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|241662759|ref|YP_002981119.1| GTP-binding protein EngA [Ralstonia pickettii 12D]
gi|404378009|ref|ZP_10983109.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
gi|240864786|gb|ACS62447.1| small GTP-binding protein [Ralstonia pickettii 12D]
gi|348615940|gb|EGY65448.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
Length = 447
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 240/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADIPG--LTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A++ LG GDP AISA G G+ +L EAL
Sbjct: 118 VNKAEGMR-----YTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DLAFAERPELAEAADAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L+G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLTGHARD----RIKHDMERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA E G A+M V Y ++LPT +L R L + V + + ++PK++Y
Sbjct: 328 VHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLMEAVEYQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + R+L +E F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRYLEGRFREAFQLKGTPLRIEFRT 437
>gi|317968893|ref|ZP_07970283.1| GTP-binding protein Der [Synechococcus sp. CB0205]
Length = 454
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 233/473 (49%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL R REA+V++ P VTRD D FKV+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPG--VTRDRTYQQGYWRDRHFKVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L L++ A+ + D + GL D + +WLR H + ++
Sbjct: 61 LVFDDDS-EFLPEIREQANLALSEASVAVVIADGQQGLTAADESIAEWLRGH--NVPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AAE LG G+P ISA G G +L + +
Sbjct: 118 AVNKCESPEAGLA----MAAEFWSLGLGEPFPISAIHGAGTGDLLDRM------------ 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + E+ E + P+Q+AIVGRPNVGKS+LLNA+ E R +V P G T
Sbjct: 162 ----------VDHLPAAEELEGEEPIQMAIVGRPNVGKSSLLNAVCGEKRAIVSPIRGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E +G+ L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 RDTIDTSIEREGKPWKLLDTAGIRRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDALDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R EEGR VV+VNK D + ++ A+ +E++ + + P
Sbjct: 272 VTEQDQRLAGRIEEEGRACVVVVNKWDAIEKDSHTM------PAMEKELRAKLYFLDWAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QP 523
++FTSAL G+ ++ ++ R+ TS +N LR+ + SW+ Q
Sbjct: 326 MLFTSALTGQRVESIFAIAAVAVEQHRRRVSTSVVNEVLREAV---SWRSPPTSRGGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 RIYYGTQVAVRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFEGSPLKLFWR 435
>gi|357155995|ref|XP_003577307.1| PREDICTED: GTPase Der-like [Brachypodium distachyon]
Length = 644
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 267/544 (49%), Gaps = 73/544 (13%)
Query: 94 DGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPD 153
DG V + + + + +K I N LP V IIGRPNVGKSALFNRL+ A+V + P
Sbjct: 117 DGDVREKR-RTMRDKTSTSKHIPDNNLPKVAIIGRPNVGKSALFNRLVGSNRAIVVDEP- 174
Query: 154 DHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFA 207
VTRD G + GD F V+D+ G+ T + S + + T GM LA + A
Sbjct: 175 -GVTRDRLYGRSYWGDQEFMVIDTGGVITLSKSQAGVMEELAITTTVGMDGIPLASREAA 233
Query: 208 I----------------------FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCE 245
I F++D ++GL D+E+ WLR++ I+A+NKCE
Sbjct: 234 IARMPSMIEKQAVAAVEEATVLLFLVDGQAGLVAADIEIADWLRRNFSHKCIILAVNKCE 293
Query: 246 SLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY-MLRVLNDSCT 304
S G A E LGF P++ISA TG G EL + + ++++ +L + D
Sbjct: 294 SPKKGQMQ----ALEFWSLGF-TPVSISAITGTGTGELLDMVCSELKNFEVLNIWLD--- 345
Query: 305 QNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR 364
DV E+DE+++P ++IVGRPNVGKS++LNAL+ EDR +V P +G TRD++
Sbjct: 346 -------DV---EEDENRVP-AISIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAID 394
Query: 365 VHFEYQ-GRTVYLVDTAGWLQREKEKGPAS----LSVMQSRKNLMRAHVVALVLDAEEV- 418
F + G+ L+DTAG +R S LSV ++ + R+ VVALV++A
Sbjct: 395 TEFTTEDGQKFKLIDTAGIRRRAAVASAGSTTETLSVKRAFSAIRRSDVVALVVEAMACV 454
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R +EG+ V++VNK D + + N + +++ + + P+
Sbjct: 455 TEQDYKIAERIEKEGKACVIVVNKWDTIPNKNNESTTH-----YELDVREKLRVLDWAPI 509
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKY 527
V+ SA+ G ++ ++ RL TS LN+ +R+ + + + ++ Y
Sbjct: 510 VYCSAINGNSVEKIISAASLVEKERSRRLGTSILNQVVREAVAFKAPPRTRGGKRGRVYY 569
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
TQ RPPTFV F++ K + R++ K L+ D G PIR+ RS R
Sbjct: 570 TTQAAVRPPTFVLFVNDAKLFPEPYRRYMHKQLRSDAGFPGTPIRLLWRSRKRADKQRRK 629
Query: 588 RQNT 591
NT
Sbjct: 630 SNNT 633
>gi|167836401|ref|ZP_02463284.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
Length = 445
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 236/471 (50%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A++ LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q S E+D + ++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 165 ----AGQPEES-------EEDAAARGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKQYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLDFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
F SA E G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|117926861|ref|YP_867478.1| small GTP-binding protein [Magnetococcus marinus MC-1]
gi|117610617|gb|ABK46072.1| small GTP-binding protein [Magnetococcus marinus MC-1]
Length = 495
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 251/496 (50%), Gaps = 53/496 (10%)
Query: 102 VKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIR 161
+KPL P + ++ LP V ++GRPNVGKS LFNRL R R+ALV +TP +TRD +
Sbjct: 1 MKPL---PQSWKNQTMSKLPLVALVGRPNVGKSTLFNRLTRTRDALVDDTPG--LTRDRQ 55
Query: 162 EGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLD 221
G+ K GD F ++D+ G E + +++ G T + + +F++D +G D
Sbjct: 56 YGIMKRGDTPFPMVDTGGFEADPGE-TMVSLIRGQTILAIEEADIIVFVVDGSTGPLTDD 114
Query: 222 LEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMT 281
+ LR + I+A NK E A A+ E LG I IS+ GLG+
Sbjct: 115 YAIASHLRSSGKPV--IIAANKSEK------KAATASIEFHELGMEPIIPISSAHGLGIG 166
Query: 282 ELYEALRPSVEDYMLRVLNDSCTQNNSS----TQDVTSPE---DDESKLPLQLAIVGRPN 334
+L E L + M + C Q + +PE + K PL+LA+VG PN
Sbjct: 167 DLLETL-----EEMTDAMEGFCRQPEEQLLPLEVEQENPEVAREPRFKGPLRLAVVGCPN 221
Query: 335 VGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAGWLQREK-----E 388
GKS+L+N L+ E+R+L AG TRDS+ V + G TV LVDTAG ++ + E
Sbjct: 222 AGKSSLVNRLVGEERLLASEIAGTTRDSIDVPITDANGETVILVDTAGIRRKSRVSLRVE 281
Query: 389 KGPASLSVMQSRKNLMRAHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLS 438
K +V+ + K++ RA V LVLDA+ A++ G GL+ VNK D +
Sbjct: 282 K----FAVIAALKSMERAEVAILVLDAQRGVTDQDKRIGSYALDAGCGLIFAVNKWDTMP 337
Query: 439 GRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 498
Q + + + + P++T PV+F SA G+ ++ Q +R+
Sbjct: 338 PGQQTI------RSFQEGLAIHFPRLTHCPVIFLSAKSGKRVEKLLPTARKVRQATQMRV 391
Query: 499 PTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLT 557
TS LNRWL + + + + + +P KI+Y +QV + PPTFV F + + + ++ R+L
Sbjct: 392 STSNLNRWLEQAIEKKAPPRAAGRPVKIRYCSQVSSSPPTFVFFCNRPEKMEESYKRYLE 451
Query: 558 KSLKEDFDLGGIPIRI 573
L+E F L G PIRI
Sbjct: 452 NQLREAFALDGTPIRI 467
>gi|421557066|ref|ZP_16002975.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
gi|402335751|gb|EJU71015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
Length = 485
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ PE +E+ K P+ A++GRPNVGKSTL+N +L E+RV+
Sbjct: 161 -------------ETFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNVILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|358635852|dbj|BAL23149.1| GTP-binding protein [Azoarcus sp. KH32C]
Length = 442
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 244/469 (52%), Gaps = 50/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+ALV + P +TRD G+ ++G+ + V+D+AG
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTRTRDALVADQPG--LTRDRHYGIGRVGERDYLVVDTAGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ A +G I+ A +A+ +F++D R GL P D ++ + LR+ + IV
Sbjct: 61 DPVAKTG-IMHEMARQAEQAIAEADALLFLVDGRMGLTPHDEQIAERLRRAGRPVHLIV- 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E + A AAE LG GDP+ ISA G G+ +L + VL
Sbjct: 119 -NKSEGMDR-----AIVAAEFHALGLGDPLPISAAHGDGVKQLVD-----------HVLA 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ T Q P ++AIVGRPNVGKSTL+N+LL E+RV+ G TR
Sbjct: 162 EFPTDGEDEEQASGGP---------RIAIVGRPNVGKSTLVNSLLGEERVIAFDMPGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D++ + FE GR L+DTAG +R K + SV+++ + + +A+V LVLDA +
Sbjct: 213 DAIAIPFERGGRDYTLIDTAGLRRRGKVFEAIEKFSVIKTLQAIEQANVAVLVLDASQDI 272
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ ++ GR LVV VNK D + Y+R E + ++I + ++
Sbjct: 273 SDQDAHIAGFILDSGRALVVAVNKWDSVDD------YRR--ELIKRDIAHKLGFLSFARF 324
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYF 528
+ SAL+G G AVM V Y + L T RL R L+ + + + +PK++Y
Sbjct: 325 HYISALKGAGVAAVMKSVDGAYAAATVNLSTPRLTRTLQAALTKQAPPRHGIFRPKMRYA 384
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + ++ +R+L ++ + F L G P+RI +S
Sbjct: 385 HQGGSNPPIVVIHGAALEHVPNSYVRYLERTFMDAFKLQGTPLRIQFKS 433
>gi|339326391|ref|YP_004686084.1| GTPase Der [Cupriavidus necator N-1]
gi|338166548|gb|AEI77603.1| GTPase Der [Cupriavidus necator N-1]
Length = 456
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 244/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 12 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 70 EPVVKEG-IVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRI--MLA 126
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G++EL EA+ +V++
Sbjct: 127 VNKAEGM-----KYTSVAADFYELGMGDPYAISAAHGDGVSELVDEAIELAVQE------ 175
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ DE K +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 176 ----------RPELAEEISDEGK-GVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 224
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 225 RDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQD 284
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G R+K + +++Q ++
Sbjct: 285 ISEQDAHIAGFIVESGRALVVGVNKWDGLDGHTRD----RIKHDLERKLQF----LSFAN 336
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
F SA E G A+M V D + ++LPT +L R L++ + K A +PK++Y
Sbjct: 337 FHFVSARERTGIGALMRSVDDAFAAAMVKLPTPQLTRVLQEAVEFQQPKRVGASRPKLRY 396
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + +++ R+L + F L G P+RI R+
Sbjct: 397 AHQGGSNPPIIVIHGNALSGVAETYRRYLENRFRTAFKLKGTPLRIEFRT 446
>gi|385337795|ref|YP_005891668.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
gi|319410209|emb|CBY90548.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
Length = 536
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 247/475 (52%), Gaps = 53/475 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 206
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ED + T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV
Sbjct: 207 IEDIL-------------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERV 252
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V
Sbjct: 253 IAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVA 312
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 313 VLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINR 364
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 365 KLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRA 424
Query: 520 S-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 425 GLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|418288058|ref|ZP_12900578.1| GTP-binding protein [Neisseria meningitidis NM233]
gi|418290324|ref|ZP_12902487.1| GTP-binding protein [Neisseria meningitidis NM220]
gi|372201766|gb|EHP15649.1| GTP-binding protein [Neisseria meningitidis NM220]
gi|372202661|gb|EHP16442.1| GTP-binding protein [Neisseria meningitidis NM233]
Length = 536
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 247/475 (52%), Gaps = 53/475 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 45 LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 102
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 103 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 161
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 162 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 206
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ED + T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV
Sbjct: 207 IEDIL-------------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERV 252
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V
Sbjct: 253 IAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVA 312
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 313 VLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINR 364
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 365 KLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRA 424
Query: 520 S-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 425 GLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 479
>gi|87125615|ref|ZP_01081460.1| putative GTP-binding protein [Synechococcus sp. RS9917]
gi|86166915|gb|EAQ68177.1| putative GTP-binding protein [Synechococcus sp. RS9917]
Length = 455
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 238/491 (48%), Gaps = 60/491 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FK++D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEP--GVTRDRTYQDGYWGDREFKLVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L + +A+ A+ ++D + G+ D + +WLR A ++A
Sbjct: 62 VFDDDS-EFLPEIREQASLAMAEASVAVVIVDGQQGVTAADESIAEWLRSQA--CPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLA----MAAEFWGLGLGEPYPISAIHGAGTGELL--------DQVLTFLP 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
E DE++ P+Q+AI+GRPNVGKS+LLNA+ E R +V P G TR
Sbjct: 167 PK------------DQEGDEAE-PIQMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ E G + LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 214 DTIDTRLERNGLSWRLVDTAGIRRRRSVHYGPEFFGINRSFKAIERSDVCVLVIDALDGV 273
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R EEGR VV+VNK D + ++ A+ +E++ + + P+
Sbjct: 274 TEQDQRLAGRIEEEGRACVVVVNKWDAVEKDSHTM------PAMEKELRAKLYFLDWAPM 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QPK 524
+FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q +
Sbjct: 328 LFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQGR 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRSVP 579
+ Y TQV RPP+F F++ K D R++ + ++E G P+++ QR
Sbjct: 385 VYYGTQVAVRPPSFTLFVNEPKLFGDTYRRYVERQIREGLGFDGTPLKLFWRGKQQRDAE 444
Query: 580 RKCGSSSSRQN 590
R RQ
Sbjct: 445 RDLARQQQRQG 455
>gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD]
gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
gi|122323095|sp|Q0BEX1.1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
Length = 445
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 243/471 (51%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL + A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G
Sbjct: 165 ----------AGQPEEADEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH- 328
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SA + G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 329 ---YISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPLIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|359478737|ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
Length = 676
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 252/508 (49%), Gaps = 80/508 (15%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LLP V I+GRPNVGKSALFNRL+ +A+V + P VTRD G A GD F V+D+
Sbjct: 170 HLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEPG--VTRDRLYGRAFWGDYEFMVIDT 227
Query: 178 AGLETEATSGS------ILDRTAGMTANVLAKTQFA----------------------IF 209
G+ T + S + +T GM LA + A IF
Sbjct: 228 GGVLTISKSQDNVMEELAITKTIGMDGIPLASREAAVARMPTMIEKQATAAIEESSVIIF 287
Query: 210 MIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDP 269
++D ++GL D+E+ WLRK+ ++A+NKCES G A E LGF P
Sbjct: 288 LVDGQAGLSAADVEIADWLRKNYSNKCIVLAVNKCESPKKGIMQ----ALEFWSLGF-TP 342
Query: 270 IAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPE--DDESKLPLQL 327
+ ISA +G G EL L+ C S + + PE D E +
Sbjct: 343 LPISAVSGTGTGEL---------------LDLVC----SGLKKIEDPENLDGEENYVPAI 383
Query: 328 AIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQRE 386
AIVGRPNVGKS++LNAL+ EDR +V P +G TRD++ F G+ L+DTAG +R
Sbjct: 384 AIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTGPDGQKYRLIDTAGIRRRA 443
Query: 387 KEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVIVN 432
S LSV ++ + + R+ VVALV++A ++ R E EG+G +++VN
Sbjct: 444 AVASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYRIAERIEREGKGCLIVVN 503
Query: 433 KMDLLSGR-QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 491
K D + + Q +A Y Q+++ + + P+V+++A+ G ++
Sbjct: 504 KWDTIPNKNQQTATYYE------QDVREKLRVLGWAPIVYSTAIAGHSVDKIIVAASTVE 557
Query: 492 QKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLS 549
++ RL TS LN+ +++ + S + ++ Y TQ RPPTFV F++ K
Sbjct: 558 KERSRRLSTSILNQVVQEALAFKSPPRNRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFP 617
Query: 550 DAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ R++ K L+ D G PIR+ RS
Sbjct: 618 ETYRRYMEKQLRSDAGFSGTPIRLLWRS 645
>gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383]
gi|123728977|sp|Q39FR3.1|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383]
Length = 445
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 240/471 (50%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G
Sbjct: 165 ----------AGQPEEADEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LV+ VNK D L + ++ ++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHARDRAKADLTRKLKFLDFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SA + G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KSHYISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPLIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|349609886|ref|ZP_08889255.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
gi|348611082|gb|EGY60753.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
Length = 485
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADVKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E + ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQIKRDISRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|419795877|ref|ZP_14321457.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
gi|385700090|gb|EIG30347.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
Length = 485
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 243/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADVKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E + ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQIKRDISRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|409406674|ref|ZP_11255136.1| GTP-binding protein [Herbaspirillum sp. GW103]
gi|386435223|gb|EIJ48048.1| GTP-binding protein [Herbaspirillum sp. GW103]
Length = 447
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 234/470 (49%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGQGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKDG-IMYEMAKQTKQAVVEADIVVFIVDGRQGLTPHDKTITDFLRKCGRSV--LLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG GDP ISA G G+ +L E +E
Sbjct: 118 VNKSEGM-----KYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALDQIE-------- 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
Q PE +E + ++AIVGRPNVGKSTL+N LL E+RV+ G T
Sbjct: 165 ---------AQRAQEPEAEEPAMRGTKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ + FE +GR L+DTAG +R K + SV+++ K++ A+VV L+LDA++
Sbjct: 216 RDSIEIPFEREGRHYTLIDTAGIRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ +E GR LVV VNK D + Q + + +++ + ++
Sbjct: 276 ISEQDAHIAGFVLESGRALVVGVNKWDGMESDQ--------RNQIKMDLERKLNFLSFAK 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ-SAQPKIKY 527
F SAL+ G +M + Y +L T RL R L + + + + S +PK++Y
Sbjct: 328 FHFISALKSTGIGPLMKSIDSAYAAAMAKLSTPRLTRALEEALEHQQPRRKGSIRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + + D R+L K +E F L G P+RI +S
Sbjct: 388 AHQGGQNPPVVVIHGNALEAIDDNYKRYLEKHFRETFSLVGTPLRIEFKS 437
>gi|374366363|ref|ZP_09624444.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
gi|373102147|gb|EHP43187.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
Length = 447
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 244/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK ++ ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRV--MLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + +E LG GDP AIS+ G G+ EL EAL +V++
Sbjct: 118 VNKAEGM-----KYTNVVSEFYELGMGDPYAISSTHGDGVRELVDEALELAVKE------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + ED+ + +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 167 -----------RPELAEEDEGDQRGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVEFERGGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G R+K + +++Q +
Sbjct: 276 VSEQDAHIAGFIVESGRALVVGVNKWDGLDGHSRD----RIKHDLERKLQF----LDFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
F SA + G A++ V D Y ++LPT +L R L++ V + + + +PK++Y
Sbjct: 328 FHFVSAQQRTGISALLRSVDDAYAAAMVKLPTPQLTRILQEAVEFQQPRRVGATRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP + + ++D R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIIVHGNSLSGIADTYRRYLENRFRSAFKLKGTPLRIEFRT 437
>gi|421888527|ref|ZP_16319618.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum K60-1]
gi|378966147|emb|CCF96366.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum K60-1]
Length = 447
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 240/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADMPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ +L EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D D D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DQAFSERPELADAAQAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|421563067|ref|ZP_16008889.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
gi|421906633|ref|ZP_16336526.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
gi|393292381|emb|CCI72468.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
gi|402341774|gb|EJU76947.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
Length = 485
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRSGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|269214116|ref|ZP_05983629.2| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
gi|269144512|gb|EEZ70930.1| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
Length = 537
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 245/475 (51%), Gaps = 53/475 (11%)
Query: 112 FTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR 171
T+ D + PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G
Sbjct: 46 LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKP 103
Query: 172 FKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
+ V+D+ G E SG IL A T + + +F++D R+GL P D + LR+
Sbjct: 104 YLVIDTGGFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQS 162
Query: 232 APQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPS 290
+P+ +A+NK E G+ A AAE L GDP IS G G+ L
Sbjct: 163 P---RPVYLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL------- 207
Query: 291 VEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ED + + + E+K P+ A++GRPNVGKSTL+NA+L E+RV
Sbjct: 208 IEDILEKFPEPEKEEE-------------EAKHPV-FAVIGRPNVGKSTLVNAILGEERV 253
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+ AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V
Sbjct: 254 IAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVA 313
Query: 410 ALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LVLDA++ A+E GR LVV VNK D +S + +E V ++I
Sbjct: 314 VLVLDAQQDVADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINR 365
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + F SAL+ RG + + Y +++PT ++ R L+ + R
Sbjct: 366 KLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRA 425
Query: 520 S-AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 426 GLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 480
>gi|402566392|ref|YP_006615737.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
gi|402247589|gb|AFQ48043.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
Length = 445
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 242/471 (51%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G
Sbjct: 165 ----------AGQPEEADEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH- 328
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SA + G A+M V D Y +LPT +L R L V + + +PK++
Sbjct: 329 ---YISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPLIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
gi|238693091|sp|B4EAW5.1|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
Length = 445
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 242/473 (51%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 165 ------------AGQPEEAEEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE+GR LV+ VNK D R K + ++++ + +
Sbjct: 272 QQDISDQDAHIAGFVVEQGRALVIGVNKWDGFDDHARD----RAKADLTRKLKFLDFAKS 327
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA + G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 328 H----FISAAKKTGIGALMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|59800867|ref|YP_207579.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA 1090]
gi|8134430|sp|O87407.1|DER_NEIG1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|3722226|gb|AAC63508.1| essential Gc protein [Neisseria gonorrhoeae]
gi|59717762|gb|AAW89167.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090]
Length = 485
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 241/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ +IGRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYFVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEKRVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDISRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|113868334|ref|YP_726823.1| GTP-binding protein EngA [Ralstonia eutropha H16]
gi|113527110|emb|CAJ93455.1| GTP-binding protein [Ralstonia eutropha H16]
Length = 456
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 244/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 12 PVIALVGRPNVGKSTLFNRMTRSRDALVADLPG--LTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 70 EPVVKEG-IVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRI--MLA 126
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + AA+ LG GDP AISA G G++EL EA+ +V++
Sbjct: 127 VNKAEGM-----KYTSVAADFYELGMGDPYAISAAHGDGVSELVDEAIELAVQE------ 175
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ DE K +++AIVGRPNVGKSTL+N L+ E+RV+ G T
Sbjct: 176 ----------RPELGEEIPDEGK-GVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTT 224
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 225 RDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQD 284
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G R+K + +++Q ++
Sbjct: 285 ISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRD----RIKHDLERKLQF----LSFAN 336
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
F SA E G A+M V D + ++LPT +L R L++ + K A +PK++Y
Sbjct: 337 FHFVSARERTGIGALMRSVDDAFAAAMVKLPTPQLTRVLQEAVEFQQPKRVGASRPKLRY 396
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + +++ R+L + F L G P+RI R+
Sbjct: 397 AHQGGSNPPIIVIHGNALSGVAETYRRYLENRFRTAFKLKGTPLRIEFRT 446
>gi|386333812|ref|YP_006029983.1| GTPase [Ralstonia solanacearum Po82]
gi|334196262|gb|AEG69447.1| GTPase [Ralstonia solanacearum Po82]
Length = 447
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 239/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADMPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ +L EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D D D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DQAFSERPELADAAQAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q +
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LAFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|161524640|ref|YP_001579652.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
gi|189350604|ref|YP_001946232.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
gi|238687037|sp|A9AH00.1|DER_BURM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160342069|gb|ABX15155.1| small GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|189334626|dbj|BAG43696.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
Length = 445
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 238/476 (50%), Gaps = 57/476 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGARPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A + LG GDP AISA G G+T++ EAL + D
Sbjct: 115 FLVVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAYAD--- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
PE+++ P +++AIVGRPNVGKSTL+NAL+ EDRV+
Sbjct: 167 ------------------QPEEEDDNDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAF 208
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALV 412
G TRDS+ V FE G+ L+DTAG + K + SV+++ +++ A+VV L+
Sbjct: 209 DMPGTTRDSIYVDFERNGKKYTLIDTAGLRRSGKVFEAIEKFSVVKTLQSISDANVVILL 268
Query: 413 LDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA++ + VE+GR LV+ VNK D L + +E ++ +
Sbjct: 269 LDAQQDISDQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHARERAKADLTRKLK 320
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSA 521
+ F SA + G A+M V D Y +LPT +L R L V + +
Sbjct: 321 FLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPV 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+PK++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 381 RPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|241758625|ref|ZP_04756739.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
gi|241321136|gb|EER57332.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
Length = 485
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFNMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|300704410|ref|YP_003746013.1| GTPase [Ralstonia solanacearum CFBP2957]
gi|299072074|emb|CBJ43406.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum CFBP2957]
Length = 447
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 239/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADMPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ +L EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D D D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DQAFSERPELADAAQAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q +
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LAFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGISRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|399116777|emb|CCG19586.1| GTPp-binding protein EngA [Taylorella asinigenitalis 14/45]
Length = 459
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 250/475 (52%), Gaps = 47/475 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL R R A+V + +TRD G ++GD F V+D+ G
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRNAIVADYSG--LTRDRHYGEGRVGDRPFLVIDTGGF 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + +G I+ A T ++++ IF++D RSG++ D E+ LRK + I+A
Sbjct: 63 EPKVKTG-IMKEMARQTELAISESDVVIFLVDTRSGINAHDHEIAVKLRKVG--VPVILA 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR---PSVEDYMLR 297
+NK E L + A+AE LG G+P+AIS+ G G+ L EA P VED
Sbjct: 120 VNKAEGLQ-----ASQASAEFHELGLGEPLAISSAHGDGVANLIEAALSKIPQVED---- 170
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + S++D E +E++ ++LA+VGRPNVGKSTL+N+LL E RV+
Sbjct: 171 -------ETSISSEDEVDSESNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFD 223
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ + FE G+ L+DTAG +R K + SV+++ + + +VV L+L
Sbjct: 224 MPGTTRDAIEIDFESNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLIL 283
Query: 414 DAE-EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+ E+ +E GR LVV +NK D LS + +E V +E + +
Sbjct: 284 DAQSEISEQDAHIAGFILESGRALVVAINKWDGLSEDK--------REWVIREFERKLRF 335
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-Q 522
++ V + SAL+ G +++ V ++ +L T +L R L+ + + + +
Sbjct: 336 LSFAKVHYISALKAYGIKSLLKSVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFR 395
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + + + D+ R+L ++ F L G P+RI +S
Sbjct: 396 PKMRYAHQGGQNPPLVIIHGNALDAIPDSYRRYLEARFRKVFKLEGTPLRIEFKS 450
>gi|421565128|ref|ZP_16010914.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
gi|402345457|gb|EJU80574.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
Length = 485
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|218767960|ref|YP_002342472.1| GTP-binding protein EngA [Neisseria meningitidis Z2491]
gi|421550399|ref|ZP_15996404.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
gi|433471007|ref|ZP_20428398.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
gi|433475455|ref|ZP_20432796.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
gi|433477334|ref|ZP_20434657.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
gi|433479360|ref|ZP_20436654.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
gi|433513205|ref|ZP_20469999.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
gi|433515350|ref|ZP_20472122.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
gi|433517351|ref|ZP_20474100.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
gi|433519572|ref|ZP_20476293.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
gi|433521676|ref|ZP_20478371.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
gi|433523737|ref|ZP_20480402.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
gi|433525877|ref|ZP_20482511.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
gi|433527961|ref|ZP_20484572.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
gi|433530135|ref|ZP_20486728.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
gi|433532392|ref|ZP_20488958.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
gi|433533995|ref|ZP_20490540.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
gi|433538726|ref|ZP_20495206.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
gi|433540705|ref|ZP_20497160.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
gi|26006740|sp|Q9JV01.1|DER_NEIMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|121051968|emb|CAM08277.1| putative GTP-binding protein [Neisseria meningitidis Z2491]
gi|402330614|gb|EJU65961.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
gi|432209496|gb|ELK65463.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
gi|432211273|gb|ELK67228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
gi|432216556|gb|ELK72437.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
gi|432217163|gb|ELK73032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
gi|432248882|gb|ELL04306.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
gi|432253938|gb|ELL09274.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
gi|432254360|gb|ELL09695.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
gi|432255563|gb|ELL10892.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
gi|432260449|gb|ELL15708.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
gi|432260636|gb|ELL15894.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
gi|432262068|gb|ELL17313.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
gi|432266268|gb|ELL21456.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
gi|432268063|gb|ELL23235.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
gi|432268337|gb|ELL23508.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
gi|432272505|gb|ELL27612.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
gi|432274734|gb|ELL29821.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
gi|432277720|gb|ELL32766.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
Length = 485
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|349575218|ref|ZP_08887139.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
gi|348013226|gb|EGY52149.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
Length = 487
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G ++G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGRVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ +L +ED + R
Sbjct: 115 FLAVNKAEG-----GNQAVLAAEFYELALGEPYVISGAHGDGVYDL-------MEDILGR 162
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ E + +K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 163 FPD-------------AEEEGESAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE GR ++DTAG +R K E+ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFERHGRPFTIIDTAGVRRRGKVEEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D + + +E + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGIDEER--------REQIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ SAL+ +G + + Y + +PT ++ R L+ + R + +PK+
Sbjct: 321 ARFHYISALKEKGIDGLFDSIQAAYDAAMINMPTPKITRVLQSAVERQAPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNALQHISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|442321136|ref|YP_007361157.1| GTP-binding protein EngA [Myxococcus stipitatus DSM 14675]
gi|441488778|gb|AGC45473.1| GTP-binding protein EngA [Myxococcus stipitatus DSM 14675]
Length = 459
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 244/482 (50%), Gaps = 45/482 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRLI RR ALV + P VTRD A+ G F +D+ G
Sbjct: 3 PLVAIVGRPNVGKSTLFNRLIGRRLALVEDMPG--VTRDRHYADAEWGGRSFTFIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
S+L + + + +F+ D R G+ D V +LRK + IVA
Sbjct: 61 -VPGEKDSLLKQVREQAQLAVEECDVIVFVTDGREGVTAADESVASYLRKSGKPV--IVA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK L N TG++ AA+ LG G+ +SAE LG+ L++ +
Sbjct: 118 ANK---LDNTTGTMQALAADFYKLGLGEVHPMSAEHNLGVNGLFDEV------------V 162
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ D P+D +++AI+GRPNVGKSTL+NA+L+E RV+ G TR
Sbjct: 163 EKLPPKEEGEGDAAPPDDGI----IRVAIIGRPNVGKSTLVNAILKEKRVVASDVPGTTR 218
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
D + Y+GR + L DTAG ++R+K + SV+ + K + R+ V L++DA E
Sbjct: 219 DPIDSPLTYKGRKLLLTDTAG-IRRKKTIAQQVEKYSVVAALKVMERSDVAVLLMDATEP 277
Query: 419 R----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E GR LV++VNK DL+ N A R ++A + ++ + V P
Sbjct: 278 AVDQDAKLAGLAEERGRALVIVVNKWDLVD---NDA---RRQDAYRESLKHALKFVGYAP 331
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
++FTSAL G V+ ++ Q++ R PT +LNR L ++ + ++P ++ Y
Sbjct: 332 ILFTSALTGSKVEKVVDVAVELAQQFRFRAPTPQLNRLLEHMVDNNPAPIVKSKPLRLYY 391
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
QV A PPTF + + + D R++T L++ FDL +PIRI R P + ++
Sbjct: 392 IAQVAAAPPTFTVTCNQPEGVPDMYKRYITNQLRKTFDL-RVPIRILFRGRPGQAKRAAR 450
Query: 588 RQ 589
++
Sbjct: 451 KK 452
>gi|421863088|ref|ZP_16294789.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379417|emb|CBX21984.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 485
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|225024393|ref|ZP_03713585.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
23834]
gi|224942774|gb|EEG23983.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
23834]
Length = 485
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R+GL P D + LR+ +P +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQ-SP--RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G AAE L G+P IS G G+ L E + + +
Sbjct: 115 YLAVNKGEG-----GRRDVLAAEFYELALGEPHVISGAHGDGVYYLMEEVLENFPE---- 165
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ ED E K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 166 ----------------ATEEDSEVKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE G+ ++DTAG +R K E+ SV+++ + + ++V LVLDA+
Sbjct: 209 TTRDSIHIDFERDGKPFTIIDTAGVRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + + + K +I+ + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEERRNTIKK--------DIEHKLHFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFASIQSAYDAAFIKMPTPKITRVLQSAIERQQPARAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + ++D+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNSLQHVADSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|394987681|ref|ZP_10380520.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
gi|393792900|dbj|GAB70159.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
Length = 465
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 239/466 (51%), Gaps = 53/466 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGHGRVGDRPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T +A+ +F++D R GL D + LRK +P+ +
Sbjct: 61 EPVAKDG-ILHEMARQTLQAVAEADAIVFLVDARQGLAAQDKIIADQLRKMG---RPLFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK E + AAE LG GDP+ IS G G+ +L E ++E + L +
Sbjct: 117 AVNKAEGMRRDV-----VAAEFYELGLGDPLVISGAHGEGVHDLVEL---ALESFPLDEV 168
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + ++AIVGRPNVGKSTL+N+LL E+RV+ + G T
Sbjct: 169 DEEEDDHP------------------KIAIVGRPNVGKSTLVNSLLGEERVIAFDQPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ + FE + L+DTAG +R K + SV+++ + + A+VV LVLDA +
Sbjct: 211 RDSIYIDFERDSKYYTLIDTAGIRKRGKVFEAIEKFSVVKTLQAVEDANVVVLVLDARQD 270
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ +E GR LVV VNK D LS + +E V +I + +
Sbjct: 271 VSEQDAHIAGFILESGRALVVAVNKWDDLSADR--------REVVKSDIARKLQFLDFAK 322
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
+ SAL+G G + + Y +++PT RL R L + +H K +PK++Y
Sbjct: 323 FHYISALQGSGVGGLFKSIDGAYASAMIKMPTPRLTRILMEATTQHQPPKSGPFRPKLRY 382
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q + PP + + +LS + R+L + ++ F+L G P+R+
Sbjct: 383 AHQGGSNPPLVIIHGTSLSSLSASYKRYLESTFRQAFELTGTPLRV 428
>gi|261379855|ref|ZP_05984428.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
gi|284797551|gb|EFC52898.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
Length = 485
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A +E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFVLEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|440684386|ref|YP_007159181.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
gi|428681505|gb|AFZ60271.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
Length = 454
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 240/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ + VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQAAIVHD--EAGVTRDRTYRPAFWSDREFSVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L++ AIF++D ++G P D E+ WLR+ I
Sbjct: 61 LVFNDDTEFLPLIRQQALMA--LSEACAAIFVVDGQTGPMPADQEIADWLRQQPVPI--F 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G A+E LG G+P ISA G G E+ + L V D
Sbjct: 117 LAVNKCESPDQGLIQ----ASEFWELGLGEPFPISAIHGSGTGEILDELIKHVPD----- 167
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+DV PED+ +++AI+GRPNVGKS+LLNA + E+R +V P +G
Sbjct: 168 -----------VKDV--PEDN----VIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+T L+DTAG +++ E G S+ ++ K + RA VV LVLDAE+
Sbjct: 211 TRDTIDTEIERNGQTYRLIDTAGIRKKKHIEYGTEFFSINRAFKAIRRADVVLLVLDAED 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR +++VNK D + + + +Y K ++T +
Sbjct: 271 GATEQDQKLAGRIIEEGRACIIVVNKWDAVE-KDSYTIYDYEK-----TLETRLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
++F SA G+ ++ V + R+ TS +N L + HS Q KI
Sbjct: 325 DIIFVSATTGQRVEKILELVNKAAEAHKRRVTTSVVNEVLTDAISWHSPPTSRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV ++PPTF F++ + +D R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVSSQPPTFALFVNDAQRFNDNYRRYIERQFRKQLGFDGTPIRVFWRS 436
>gi|147669843|ref|YP_001214661.1| GTP-binding protein EngA [Dehalococcoides sp. BAV1]
gi|146270791|gb|ABQ17783.1| small GTP-binding protein [Dehalococcoides sp. BAV1]
Length = 442
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 241/480 (50%), Gaps = 62/480 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+ GL
Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFATVSWLDRRLIMVDTGGL 64
Query: 181 ETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + ++ G N+ + + + ++DV+ GL D E+ +R+
Sbjct: 65 DPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKDGLITPDYEMADIIRRTG--- 115
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP++ + NK ++L G A E LGFG+P ISA G G+++L D
Sbjct: 116 KPVILVANKADNLKMGQ-----EATEFYSLGFGEPAVISAFHGTGISDLM--------DR 162
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+L L D Q + +PE+D S ++LA+VGR NVGKSTLLN L EDR +V
Sbjct: 163 VLEELPD---------QPIATPEEDTS---VKLALVGRTNVGKSTLLNTFLGEDRSIVSN 210
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV LV+
Sbjct: 211 IPGTTRDAIDTPLDFDGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAIDRADVVLLVM 270
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 271 DTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRFKF 322
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQ 522
+ P++F S GRG ++ + ++ R+PT+++N + + + H+ Q Q
Sbjct: 323 LDYAPILFVSGKTGRGVDTIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGKVQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++ KC
Sbjct: 383 LKIFYATQAETNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGEKC 442
>gi|333375652|ref|ZP_08467458.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
gi|332969954|gb|EGK08954.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
Length = 489
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 242/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL + ++ALV++ P +TRD G AK+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPG--LTRDRHYGHAKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ AAE L G+P IS G G+ L E + + D
Sbjct: 115 FLAVNKGEG-----GNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLENFPD---- 165
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
S E+ E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 166 ----------------ASDEEPENKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE + ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFERDNKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LV+ VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVIAVNKWDGISDER--------REQVKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ F SAL+ +G + + Y +++PT ++ R L+ + R +PK+
Sbjct: 321 AKLHFISALKEKGIDGLFDSIQAAYNAAFIKMPTPKITRVLQSAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q + PP V + + D+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGSNPPVIVIHGNSLHAIGDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|300312253|ref|YP_003776345.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
gi|300075038|gb|ADJ64437.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
Length = 447
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 237/471 (50%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKDG-IMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPV--LLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A+ LG GDP ISA G G+ +L EAL
Sbjct: 118 VNKSEGM-----KYTSVTADFYELGMGDPYVISAAHGDGVADLVTEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL-PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + Q PE +E+ + ++AIVGRPNVGKSTL+N LL E+RV+ G
Sbjct: 161 ------DVAEAQRTPEPEPEETAVRGTKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + FE +GR L+DTAG +R K + SV+++ K++ A+VV L+LDA++
Sbjct: 215 TRDSIEIPFEREGRHYTLIDTAGIRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQ 274
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ +E GR LVV VNK D + Q + + +++ + ++
Sbjct: 275 DISEQDAHIAGFVLESGRALVVGVNKWDGMESDQ--------RNQIKMDLERKLNFLSFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ-SAQPKIK 526
F SAL+ G +M + Y +L T RL R L + + + + S +PK++
Sbjct: 327 KFHFISALKSTGIGPLMKSIDSAYAAAMAKLSTPRLTRALEEALEHQQPRRKGSIRPKLR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + + + D R+L K +E F L G P+RI RS
Sbjct: 387 YAHQGGQNPPVVVIHGNALEAIDDNYKRYLEKHFRETFSLVGTPLRIEFRS 437
>gi|255544860|ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus communis]
gi|223547399|gb|EEF48894.1| GTP-binding protein enga, putative [Ricinus communis]
Length = 624
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 261/529 (49%), Gaps = 81/529 (15%)
Query: 99 DHKVKPLYEKPVDFTKIDI--NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHV 156
D K + +K FT DI NLLP V I+GRPNVGKSALFNRL+ +A+V + P V
Sbjct: 117 DDKKETRKQKRQKFTIPDIPDNLLPRVAIVGRPNVGKSALFNRLVGGNKAIVVDEP--GV 174
Query: 157 TRDIREGLAKLGDLRFKVLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFA--- 207
TRD G + GD F V+D+ G+ T + S + T GM LA + A
Sbjct: 175 TRDRLYGRSFWGDFEFMVVDTGGVLTISQSQDNVMEDLAITTTIGMDGIPLASREAAVAR 234
Query: 208 -------------------IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLH 248
IF++D ++GL D+E+ WLRK+ I+A+NKCES
Sbjct: 235 MPSMIERQAAAAVEESSVIIFLVDGQAGLIAADIEIADWLRKNYSNKFIILAVNKCESPK 294
Query: 249 NGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNS 308
G AAE LG PI ISA +G G EL + + C+Q
Sbjct: 295 KGIMQ----AAEFWSLGLS-PIPISALSGTGTGELLDLV---------------CSQ--L 332
Query: 309 STQDVTSPEDDESK--LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH 366
+ +V+ D+E + +P +AIVGRPNVGKS++LNAL+ EDR +V P +G TRD++
Sbjct: 333 AKVEVSKHLDNEEQNYVP-AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTE 391
Query: 367 FEY-QGRTVYLVDTAGWLQREKEKGPAS----LSVMQSRKNLMRAHVVALVLDAEEV--- 418
F G+ L+DTAG +R S LSV ++ + + R+ VVALV++A
Sbjct: 392 FSGPDGQKFRLIDTAGIRRRAAVASSGSLTEALSVNRAFRAIRRSDVVALVIEAMACITE 451
Query: 419 -------RAVEEGRGLVVIVNKMDLLSGR-QNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
R +EG+G +++VNK D + + Q +A Y Q+++ + + P+V
Sbjct: 452 QDFRIADRIEKEGKGCLIVVNKWDTIPNKNQQTATYYE------QDVREKLRILQWAPIV 505
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYF 528
+++A+ ++ ++ RL T+ LN+ +R+ + S + ++ Y
Sbjct: 506 YSTAIADHSVEKIIIAASAVEKERSRRLSTAILNQVVREALAFKSPPRTRGGRRGRVYYC 565
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQ RPPTFV F++ + RF+ K L+ D G PIR+ RS
Sbjct: 566 TQAAIRPPTFVFFVNDASLFPETYRRFMEKQLRSDAGFSGTPIRLLWRS 614
>gi|152981185|ref|YP_001353813.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
gi|166198722|sp|A6SZW6.1|DER_JANMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|151281262|gb|ABR89672.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
Length = 447
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 236/469 (50%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + +IGRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALIGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T +A+ IF++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + T A+ LG GDP ISA G G+ +L E LN
Sbjct: 118 VNKAEGMKYTT-----VTADFYELGMGDPYVISAAHGDGVNDLVE-----------EALN 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ Q + S +D S ++LAIVGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 162 IAFAQRPPEEEAPAS--NDRS---IKLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DSIEIPFERDGKHYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L+ + ++ + +++ + ++
Sbjct: 277 SEQDAHIAGFILESGRALVVGVNKWDGLTSDR--------RDEIKMDLERKLSFLSFAKT 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYF 528
F SAL+ G +M V Y L T +L R L V + + S +PK++Y
Sbjct: 329 HFVSALKSSGIGPMMKSVDGAYAAAMSNLSTPKLTRALIEAVEHQQPRRKGSIRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + + RFL K +E F L G P+RI RS
Sbjct: 389 HQGGMNPPIVVIHGNALEAIDANYKRFLEKHFRETFSLVGTPLRIELRS 437
>gi|443328905|ref|ZP_21057497.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
gi|442791450|gb|ELS00945.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
Length = 453
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 247/476 (51%), Gaps = 62/476 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL ++A+VY+ P +TRD + D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQQAIVYDKP--GITRDRTYRPSFWQDREFQVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A L + AIF++D + GL D E+ WLR A + +
Sbjct: 61 LVFDDDTEFLPLIRQQAMAA--LTEASAAIFVVDGQMGLTAGDREIADWLR--AQSVPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYM 295
+A+NKCES+ G A AAE LG G+P +S G G EL + L P V++
Sbjct: 117 LAVNKCESIEQG----AIQAAEFWQLGLGEPYPVSGIHGNGTGELLDELITHLPPVDEL- 171
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
PE +E +++AI+GRPNVGKS+LLNAL E R +V
Sbjct: 172 --------------------PEIEE----IKVAIIGRPNVGKSSLLNALTGEKRAIVSSV 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVL 413
+G TRD++ E G T L+DTAG ++R+K E G S+ ++ K + RA VV VL
Sbjct: 208 SGTTRDAIDTVVERNGTTYRLIDTAG-IRRKKNVEYGAEFFSINRAFKAIRRADVVLFVL 266
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D + R +EEG+ ++I+NK D + + + +Y+ Q++ + +
Sbjct: 267 DVLDGVTEQDLKLAGRIIEEGKATIIILNKWDAVE-KDSHTIYE-----YKQKVMSRLYF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDT-YQKWCLRLPTSRLNRWLRKVMGRHS--WKDQS 520
+ ++FTSAL G+ R+ + ++DT ++ R+ TS +N L + +G HS Q
Sbjct: 321 MEWAELLFTSALTGK-RVDKILDLVDTAISEYRRRVTTSVINEVLEEAVGWHSPPTNRQG 379
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KI Y TQV++ PPT F++ K +D R++ + +E G P+R+ R
Sbjct: 380 KQGKIYYGTQVRSEPPTITLFVNDPKRFTDNYRRYIDRQFREQLGFKGTPVRLVWR 435
>gi|73749080|ref|YP_308319.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1]
gi|73660796|emb|CAI83403.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1]
Length = 442
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 242/480 (50%), Gaps = 62/480 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+ GL
Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFATVSWLDRRLIMVDTGGL 64
Query: 181 ETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + ++ G N+ + + + ++DV+ GL D E+ +R+
Sbjct: 65 DPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKDGLITPDYEMADIIRRTG--- 115
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP++ + NK ++L G A E LGFG+P ISA G G+++L D
Sbjct: 116 KPVILVANKADNLKMGQ-----EATEFYSLGFGEPAVISAFHGTGISDLM--------DR 162
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+L L D Q + +PE+D S ++LA+VGR NVGKSTLLN L E+R +V
Sbjct: 163 VLEELPD---------QPIATPEEDTS---VKLALVGRTNVGKSTLLNTFLGEERSIVSN 210
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV LV+
Sbjct: 211 IPGTTRDAIDTPLDFDGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAIDRADVVLLVM 270
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 271 DTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRFKF 322
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQ 522
+ P++F S GRG A++ + ++ R+PT+++N + + + H+ Q Q
Sbjct: 323 LDYAPILFVSGKTGRGVDAIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGKVQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++ KC
Sbjct: 383 LKIFYATQAETNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGEKC 442
>gi|356542027|ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]
Length = 632
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 260/534 (48%), Gaps = 78/534 (14%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
NLLP V I+GRPNVGKSALFNRL+ A+V + P VTRD G + G+ F V+D+
Sbjct: 127 NLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP--GVTRDRLYGRSYWGEHEFMVVDT 184
Query: 178 AGLETEATSGSI------LDRTAGMTANVLAKTQFA----------------------IF 209
G+ T + S + + T GM LA + A IF
Sbjct: 185 GGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIF 244
Query: 210 MIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDP 269
++D ++GL D E+ WLRK+ I+A+NKCES A+E LGF +P
Sbjct: 245 LVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQ----ASEFWSLGF-EP 299
Query: 270 IAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAI 329
+ ISA +G G EL D + L NN +D ++I
Sbjct: 300 LPISAISGTGTGELL--------DLVCSGLQKIEESNNLVEEDYVP----------AISI 341
Query: 330 VGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQREKE 388
VGRPNVGKS++LNAL+ EDR +V P +G TRD++ F G+ L+DTAG +R
Sbjct: 342 VGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRTAI 401
Query: 389 KGPAS----LSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKM 434
S LSV ++ + + R+ VVALV++A R +EG+G V++VNK
Sbjct: 402 ASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKW 461
Query: 435 DLLSGR-QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQK 493
D + + Q +A Y Q+++ + + P+V+++A+ G ++ I+ ++
Sbjct: 462 DTIPNKNQQTASYYE------QDVREKLRSLVWAPIVYSTAVAGHSVDKIIVAAIEVEKE 515
Query: 494 WCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDA 551
RL TS LN+ +++ +G + ++ Y TQ RPPTFV F++ K +
Sbjct: 516 RSRRLGTSILNQVVQEAVGFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPET 575
Query: 552 ELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGRTFSDKRTV 605
R++ K L+ D G PIR+ RS RK G + T + T +D++ V
Sbjct: 576 YRRYMEKQLRTDAGFSGTPIRLLWRS-RRKMGKDEGKPVTKTRENLTSNDRKLV 628
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 115 IDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFK 173
++ + +P + I+GRPNVGKS++ N L+ +V +P TRD I +F+
Sbjct: 331 VEEDYVPAISIVGRPNVGKSSILNALVGEDRTIV--SPISGTTRDAIDTEFTGPDGQKFQ 388
Query: 174 VLDSAGLETEATSGSILDRTAGMTAN----VLAKTQFAIFMIDVRSGLHPLDLEVGKWLR 229
++D+AG+ S T ++ N + ++ +I+ + + D ++ + +
Sbjct: 389 LIDTAGIRKRTAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIE 448
Query: 230 KHAPQIKPIVAMNKCESLHN 249
K ++ +NK +++ N
Sbjct: 449 KEGKGC--VIVVNKWDTIPN 466
>gi|319637814|ref|ZP_07992580.1| GTP-binding protein engA [Neisseria mucosa C102]
gi|317400969|gb|EFV81624.1| GTP-binding protein engA [Neisseria mucosa C102]
Length = 485
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 244/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE G+ ++DTAG +R K +K SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFERDGKPFTIIDTAGVRRRGKVDKVVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|421554603|ref|ZP_16000544.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
gi|402332563|gb|EJU67888.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
Length = 485
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGTHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPEPEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDVADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDISRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|116075028|ref|ZP_01472288.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
gi|116067225|gb|EAU72979.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
Length = 455
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 240/493 (48%), Gaps = 64/493 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L +A+ A+ ++D + G+ D + +WLR ++A
Sbjct: 62 VFDDDS-EFLPEIREQANLAMAEACVALVIVDGQQGMTAADESIAEWLRSQ--NCPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G +L D +L L
Sbjct: 119 VNKCESPDQGLA----MAAEFWSLGLGEPHPISAIHGAGTGDLL--------DQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDESK--LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D+E + P+Q+AIVGRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDEEGEGDEPIQMAIVGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + E QG LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTNIERQGMPWKLVDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EGR VV+VNK D + ++ A+ +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEDEGRACVVVVNKWDAVEKDSHTM------PAMEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRS 577
++ Y TQV +RPP+F F++ K D R++ + ++E G P+++ QR
Sbjct: 383 GRLYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFEGTPLKLFWRGKQQRD 442
Query: 578 VPRKCGSSSSRQN 590
R SR +
Sbjct: 443 AERDLARQQSRSS 455
>gi|313668681|ref|YP_004048965.1| GTP-binding protein [Neisseria lactamica 020-06]
gi|313006143|emb|CBN87604.1| putative GTP-binding protein [Neisseria lactamica 020-06]
Length = 485
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 242/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
++ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LENFPEPEAEEADAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ G + + Y +++PT ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKEHGIDGLFDSIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|159479670|ref|XP_001697913.1| hypothetical protein CHLREDRAFT_120661 [Chlamydomonas reinhardtii]
gi|158274011|gb|EDO99796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 247/482 (51%), Gaps = 60/482 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKSALFNR+ A+V++ P VTRD A GD F ++D+ GL +
Sbjct: 1 VAIVGRPNVGKSALFNRIAGASVAVVFDQP--GVTRDRLYTRAFWGDKEFVMIDTGGLMS 58
Query: 183 EAT--SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+AT ++R A A +A+ I ++D ++GL P D E+ WLR + P ++A
Sbjct: 59 DATRLPPDAIERQA---AAGVAEADTVILLVDGQAGLQPGDEEILSWLRSNHPSKSLLLA 115
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCE++ +A + L +P A+SA +G G E ML VL
Sbjct: 116 VNKCENVAKADQMVAEFWSTGL-----EPHAVSAISGTGTGE------------MLDVLA 158
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ QD D+ PL +AIVGRPNVGKS+LLNA+ E+R +V +G TR
Sbjct: 159 KMLPPPTGAEQD------DDPDRPLAVAIVGRPNVGKSSLLNAIAGEERSIVCDMSGTTR 212
Query: 361 DSVRVHFEY-QGRTVYLVDTAGWLQREK----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
D+V G+ + L+DTAG +R + G +SV ++ + + RA V LV+DA
Sbjct: 213 DAVDTKVTLPTGKKLTLIDTAGIRKRSRVADSPDGAEQISVDRAMRAVRRADVAVLVIDA 272
Query: 416 ------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ R E EG+ +VV+VNK D + R + E + + ++T + V
Sbjct: 273 VEGITQQDFRLSELFAAEGKAVVVVVNKWDRVDPRLWTV------EKMAENVRTQLRHVA 326
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ--- 522
VV TSA+ GR V+ V+D + R+PT+ LN LR+ WK Q
Sbjct: 327 WASVVCTSAIYGRHVEDVLEAVLDAGAQHRRRVPTATLNMVLREAT---QWKSPPTQRGS 383
Query: 523 ---PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+I Y TQ ARPP+FV F++ +K D R++ + L+++ G P+R+ R P
Sbjct: 384 LRKGRIYYATQAGARPPSFVFFVNDEKLFPDDYRRYMERQLRDNIGFPGSPLRLFWRGKP 443
Query: 580 RK 581
++
Sbjct: 444 KR 445
>gi|224826453|ref|ZP_03699555.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224601554|gb|EEG07735.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 463
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 251/490 (51%), Gaps = 56/490 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD + V+D+ G
Sbjct: 3 PTVALVGRPNVGKSTLFNRLTRSRDALVADQPG--LTRDRHYGHGRVGDKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E G IL A T + + +F++D R+G+ P D + LR++ +P+ +
Sbjct: 61 EPVVDEG-ILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQND---RPVFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + + S+AGA L LG +P+AISA G G+ EL E + +E +
Sbjct: 117 VVNKAEGI---SQSIAGAEFHELALG--EPLAISAAHGDGVRELMEMV---LEPFP---- 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ ++ E + P + A++GRPNVGKSTL+NA+L E+RV+ +AG T
Sbjct: 165 --------------AATDEKEVRHP-KFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTT 209
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RDS+ + FE T ++DTAG +R K + SV+++ K + A+V LVLDA+
Sbjct: 210 RDSIYIDFERDDHTYTIIDTAGVRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLD 269
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A+E GR LVV VNK D + Q KE V EI + +
Sbjct: 270 ISEQDATIAGFALEAGRALVVAVNKWDNIDTEQ--------KELVKHEIARKLGFLDFAK 321
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
F SA+EGRG + + + Y+ ++L T +L R L + R + + +PK++Y
Sbjct: 322 FHFISAIEGRGIADLFKSIDEAYRAAMVKLATPKLTRVLEVAVERQAPPRVGQVRPKMRY 381
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
Q PP V + + D+ R+L + ++ F L G P+R+ +S S
Sbjct: 382 AHQGGMNPPIIVIHGNALAKVPDSYTRYLEHTFRKVFKLQGTPLRVQFKSAENPF--DSE 439
Query: 588 RQNTGQKVGR 597
+++ G K G+
Sbjct: 440 KESKGGKPGK 449
>gi|295696375|ref|YP_003589613.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
gi|295411977|gb|ADG06469.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
Length = 451
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 253/479 (52%), Gaps = 53/479 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNR++ R A+V + P VTRD LA F+++D+ GL+
Sbjct: 13 VAIVGRPNVGKSTLFNRIVGGRIAIVEDKP--GVTRDRLYALASWNGRGFRIIDTGGLDF 70
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-AM 241
S +I+ L + IF++D SG+ P D E+ LR+ KP+V A+
Sbjct: 71 -GGSDAIVKSIRAQVELALEEADAVIFLVDGISGITPADEEIAGRLRRAG---KPVVLAV 126
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK ++ + A E LG GDP ISAE GLG+ +L +A+ +R L
Sbjct: 127 NKLDNPNRMI-----AQYEFFRLGLGDPFPISAEHGLGIGDLLDAV--------VRRL-- 171
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+D P+ D +++A++GRPNVGKS+L+N LL E+RVLV G TRD
Sbjct: 172 -------PPEDTGEPDHDA----IRVAVIGRPNVGKSSLVNRLLGEERVLVSEIPGTTRD 220
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD-----A 415
+V FE +G + L+DTAG +R + + SV+++ + + R+ V LV+D A
Sbjct: 221 AVDTLFEREGHSFILIDTAGLRKRGRVWEDTEKYSVLRALRAIDRSDVCLLVIDGKQGIA 280
Query: 416 EEVR-----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
E+ + AV+ GR + V+VNK DL+ +A+ R+ E + QE +T PVV
Sbjct: 281 EQDKRVAGYAVDAGRAVAVVVNKWDLVEKDDKTAV--RMTEEIRQEFAF----MTWAPVV 334
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR-HSWKDQSAQPKIKYFT 529
F SA G+ ++ V+ ++ +R+PT+ +NR + + R D+ + ++ Y +
Sbjct: 335 FVSAKTGQRVGRILDLVVQIAEQHAMRMPTATVNRVVEDAVQRVPPPSDKGRRLRLYYAS 394
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSR 588
QV +PPTFV F++ + + + +R+L L+ F G P+R+ R RK G+ R
Sbjct: 395 QVGVKPPTFVFFVNDPELMHFSYIRYLENQLRSAFGFEGTPLRLLIRQ--RKSGARPPR 451
>gi|347540915|ref|YP_004848340.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
gi|345644093|dbj|BAK77926.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
Length = 463
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 252/490 (51%), Gaps = 56/490 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD + V+D+ G
Sbjct: 3 PTVALVGRPNVGKSTLFNRLTRSRDALVADQPG--LTRDRHYGHGRVGDKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E G IL A T + + +F++D R+G+ P D + LR++ +P+ +
Sbjct: 61 EPVVDEG-ILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQND---RPVFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + + S+AGA L LG +P+AISA G G+ EL E + +E +
Sbjct: 117 VVNKAEGI---SQSIAGAEFHELALG--EPLAISAAHGDGVRELMEMV---LEPFP---- 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ ++ E + P + A++GRPNVGKSTL+NA+L E+RV+ +AG T
Sbjct: 165 --------------AATDEKEVRHP-KFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTT 209
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RDS+ + FE T ++DTAG +R K + SV+++ K + A+V LVLDA+
Sbjct: 210 RDSIYIDFERDDHTYTIIDTAGVRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLD 269
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A+E GR LVV VNK D + Q KE V +EI + +
Sbjct: 270 ISEQDATIAGFALEAGRALVVAVNKWDNIDTEQ--------KELVKREIARKLGFLDFAK 321
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
F SA+EGRG + + + Y+ ++L T +L R L + R + + +PK++Y
Sbjct: 322 FHFISAIEGRGIADLFKSIDEAYRAAMVKLATPKLTRVLEVAVERQAPPRVGQVRPKMRY 381
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSS 587
Q PP V + + D+ R+L + ++ F L G P+R+ +S S
Sbjct: 382 AHQGGMNPPIIVIHGNALTKVPDSYTRYLEHTFRKVFKLQGTPLRVQFKSAENPF--DSE 439
Query: 588 RQNTGQKVGR 597
+++ G K G+
Sbjct: 440 KESKGGKPGK 449
>gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000]
gi|26006721|sp|Q8Y026.1|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000]
Length = 447
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 240/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADMPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ EL EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRELVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DLAFAERPELAEAAEGHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDMERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|58584843|ref|YP_198416.1| GTP-binding protein EngA [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419159|gb|AAW71174.1| Predicted GTPase [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 470
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 249/481 (51%), Gaps = 55/481 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNR++ R+ A+V N P +TRD +EG+ ++ DL K++D+ G
Sbjct: 4 IAIVGLPNAGKSTLFNRILGRKAAVVSNIPG--ITRDRQEGVGRISDLELKIIDTGGWND 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGL------HPLDLEVGKWLRKHAPQIK 236
+ ++ + +F++F D+ L + + E KWL++ +
Sbjct: 62 QTN----------FFLQIVEQIEFSLFSADIIFFLVDAKVQNEQNKEFAKWLKRRTNKSV 111
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY-- 294
++A NKCES + F P+ ISAE LGM +LY AL ++
Sbjct: 112 ILIA-NKCESYKSENIDYLQ------FFDFIGPVYISAEHNLGMVDLYNALAGVIDSSTN 164
Query: 295 ----------MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 344
+++V + N + + L++AI+GRPNVGKST LN+L
Sbjct: 165 FSSVIPKPLPVIKVAGTGIQEKNEQISTLHAENQSNQPNRLRVAIIGRPNVGKSTFLNSL 224
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLS-VMQSRKNL 403
L E+R++ E G TRDSV + + + G+ + L+DTAG +R L V +S +++
Sbjct: 225 LSENRLITSSEPGTTRDSVDITYNHNGKLITLIDTAGIRRRANLIDNLELKFVKKSMESI 284
Query: 404 MRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAV 453
R+HVV L+LD+ +++ A++ G+G+++++NK DL++ S L K V++
Sbjct: 285 KRSHVVVLMLDSLLGIKQQDLSIGEAAIKGGKGIIIVLNKWDLINKDDRSRLIKFVRQ-- 342
Query: 454 PQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
QEI + +V P V SAL+G V+ + ++ + ++ T+++N+WL +GR
Sbjct: 343 -QEITRLFLEV---PTVTISALKGIRCSDVIDKCLEVNEFLNKKISTAKVNKWLVDALGR 398
Query: 514 HSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H + ++KY Q+ +PP F + + + ++ R+LT L+++F + GIP+R
Sbjct: 399 HPHPFVKGRAIRMKYIAQIGTKPPAFSLTCNVPEGVDESYKRYLTNDLRKNFFIDGIPVR 458
Query: 573 I 573
+
Sbjct: 459 L 459
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PN GKSTL N +L +V G+TRD + ++DT GW
Sbjct: 2 LKIAIVGLPNAGKSTLFNRILGRKAAVVSNIPGITRDRQEGVGRISDLELKIIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ L ++ Q +L A ++ ++DA+
Sbjct: 60 --NDQTNFFLQIVEQIEFSLFSADIIFFLVDAK 90
>gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160]
gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160]
Length = 445
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 235/471 (49%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRAGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + ++ +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A AA+ LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYANVAADFYELGLGDPRAISAAHGDGVTDMINEALEVAYAGQPEES 171
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D + +++AIVGRPNVGKSTL+NAL+ E+RV+ G
Sbjct: 172 EEDEEARG------------------VKIAIVGRPNVGKSTLINALVGEERVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 214 TRDSIYVDFERNGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E +++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLERKLKFLDFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
F SA E G +M V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KFHFISAAEKTGIGPLMRSVDDAYTAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPIIVIHGNALDAITDTYKRYLENRFRETFKLTGTPLRIEFRS 436
>gi|83747951|ref|ZP_00944982.1| GTP-binding protein [Ralstonia solanacearum UW551]
gi|421897156|ref|ZP_16327524.1| gtp-binding protein [Ralstonia solanacearum MolK2]
gi|83725369|gb|EAP72516.1| GTP-binding protein [Ralstonia solanacearum UW551]
gi|206588362|emb|CAQ35325.1| gtp-binding protein [Ralstonia solanacearum MolK2]
Length = 447
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 239/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADMPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ +L EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DQAFSERPELAEAAQAHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q +
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LAFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|167569736|ref|ZP_02362610.1| GTP-binding protein EngA [Burkholderia oklahomensis C6786]
Length = 445
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 236/473 (49%), Gaps = 51/473 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYML 296
+ +NK E + A++ LG GDP AISA G G+T++ EAL +
Sbjct: 115 FLVVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
Q S E+D + +++AIVGRPNVGKSTL+N L+ EDRV+
Sbjct: 165 ------AGQPEES-------EEDAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 212 GTTRDSIYVDFERNGKRYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 271
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ + VE+GR LVV VNK D L V+E ++ + +
Sbjct: 272 RQDISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERAKADLARKLKFLD 323
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA E G +M V D Y +LPT +L R L V + + +PK
Sbjct: 324 FAKSHFISAAEKTGIGPLMRSVDDAYAAAMKKLPTPKLTRALIDAVEFQQPRRRGPVRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 384 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|344171684|emb|CCA84304.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
syzygii R24]
Length = 447
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 241/470 (51%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADIPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + T A + LG GDP AIS+ G G+ +L EAL
Sbjct: 118 VNKAEGMKYTT-----VATDFYELGLGDPRAISSAHGDGVRDLVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DLAFAERPELAEAAEGHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 328 VHYISAKQRSGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|372489746|ref|YP_005029311.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
gi|359356299|gb|AEV27470.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
Length = 461
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 239/467 (51%), Gaps = 54/467 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL + R+A+V + P +TRD G K+G + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTKTRDAIVADLPG--LTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I A T +A+ +F++D R G+ D E+ LRK + +VA
Sbjct: 61 EPLAKDG-IFHEMARQTEQAIAEADAVVFVVDGRVGITAQDKEIANKLRKLERPV--LVA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + + AA+ LG G+P +SA G G+ +L E
Sbjct: 118 VNKAEGMKHTV-----VAADFYELGLGEPFPVSATHGDGVRDLVEM-------------- 158
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPL-QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ D P++D++K ++AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 159 --------ALADFPEPDEDDAKDETPRVAIVGRPNVGKSTLINALMGEERVIAFDMPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE GR L+DTAG +R K + SV+++ +++ A+VV LVLDA++
Sbjct: 211 RDAIFVDFERNGRKYTLIDTAGLRRRGKVFEAVEKFSVVKTLQSIEDANVVVLVLDADQD 270
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L Y+R E + +++ + ++
Sbjct: 271 ISDQDAHIAGFVVESGRSLVVAVNKWDSLDA------YRR--ERIKVDLEHKLKFLSFAT 322
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKIK 526
+ SAL+G G + V Y +LPT +L R L + R + +PK++
Sbjct: 323 FHYISALKGLGLEKLFTSVDRAYAAAMAKLPTPKLTRVLLDAVARQAPPRHGGIFRPKLR 382
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y Q + PP V + +L ++ R+L + +E F L G P+R+
Sbjct: 383 YAHQGGSNPPLIVIHGNALDSLPESYRRYLEHTFREVFKLQGTPLRV 429
>gi|225077176|ref|ZP_03720375.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
NRL30031/H210]
gi|224951524|gb|EEG32733.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
NRL30031/H210]
Length = 486
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 240/466 (51%), Gaps = 53/466 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+ G
Sbjct: 4 PTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTGGF 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E SG IL A T + + +F++D R+GL P D + LR+ +P+ +
Sbjct: 62 EPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPVYL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK E G+ A AAE L GDP IS G G+ L +ED +L
Sbjct: 118 AVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IED-ILETF 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + ++ V A++GRPNVGKSTL+NA+L E+RV+ AG T
Sbjct: 165 PEPEKEEEAAKHPV-------------FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA++
Sbjct: 212 RDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQD 271
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 272 IADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDINRKLYFLDFAK 323
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKY 527
F SAL+ RG + + Y +++PT ++ R L+ + R +PK++Y
Sbjct: 324 FHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRY 383
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 384 AHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 429
>gi|302039510|ref|YP_003799832.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii]
gi|300607574|emb|CBK43907.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii]
Length = 464
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 243/476 (51%), Gaps = 60/476 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + +IGRPNVGKS LFNR++ R A+V + P VTRD + + RF+++D+ G
Sbjct: 28 LPIIALIGRPNVGKSTLFNRILGTRAAIVDDVP--GVTRDRNYADSTYRNRRFRLVDTGG 85
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L+ A+ G +L + +A+ + ++D RSGL P D EV + LR KP+
Sbjct: 86 LDPTASEG-MLSLIRQQSQLAIAEADILVLVLDARSGLTPADEEVVQTLRGSD---KPVY 141
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK + T A+ LG +SAE G+G+ EL + L +M
Sbjct: 142 YVINKID-----TPKADPLVADFYRLGQEQLYPLSAEHGIGVAELLDDLF----SHMAEP 192
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L++ T + ++AIVGRPNVGKSTL+N++L E RV+V G
Sbjct: 193 LDEEATSDTP-----------------RIAIVGRPNVGKSTLVNSVLGEARVVVSNVPGT 235
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD V ++ R L DTAG +R + E+G SV +S + + R+ + L+LDAEE
Sbjct: 236 TRDPVDSVATFKDRQYVLTDTAGIRRRGRVERGIEGYSVARSLRAIGRSDIAVLLLDAEE 295
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++GR ++IVNK DL + ++ +EA Q+++ P +
Sbjct: 296 GVTEQDTKIAGLVLKQGRACILIVNKWDLKTDDVHA------REAYKQDLERRFPFLAWA 349
Query: 468 PVVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
PV+F SALE RG A++ QV Y +C R+PT LN++ + ++ H + +P
Sbjct: 350 PVLFISALEQDFLRGLFALIDQV---YFSFCKRVPTGPLNQFFQGLLEEHPLPVRKGKPA 406
Query: 524 ---KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K + TQV RPP F F+ ++ A LRFL +++++ G PIR+ R
Sbjct: 407 KASKSAFMTQVATRPPAFALFVGHPDNMTPAYLRFLENQIRKEYHFSGTPIRLMTR 462
>gi|254478784|ref|ZP_05092152.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
gi|214035296|gb|EEB76002.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
Length = 439
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 242/468 (51%), Gaps = 53/468 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNR+++RR ++V + P VTRD G A+ + +F ++D+ GL+
Sbjct: 6 VAIVGRPNVGKSTLFNRILKRRISIVEDIP--GVTRDRIYGNAEWLNRKFILVDTGGLDP 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ I + + +F++D R GL P D E+ LRK ++ I+ N
Sbjct: 64 DPKD-VIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEV--ILVCN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K +S S + LG G+PI ISA GLG+ EL D +++ L ++
Sbjct: 121 KVDSFKEMPASFY----DFFKLGLGEPIPISASNGLGIGELL--------DEVIKRLPEN 168
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ T +++A++GRPNVGKS+L+N +L E+RV+V G TRD+
Sbjct: 169 DVEYEEET--------------IKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDA 214
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ F GR L+DTAG R K + S+ SV+++ + RA + L++DA E
Sbjct: 215 IDTPFTKDGRNYILIDTAGI--RRKSRISESIERYSVLRALAAIERADICLLMIDATEGP 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+G++++VNK D++ N+ YK E + +++ ++ P+
Sbjct: 273 TEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNT--YKEYTEMIREKLAF----ISFAPI 326
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
+F SA G+ V+ V ++++ R+ T LN L + M +P KI Y
Sbjct: 327 LFISAKTGQRIHKVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFPPPSSKGRPVKIYYA 386
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTFV F++ + L + +RFL +++++F G+PI I+ +
Sbjct: 387 TQVGTKPPTFVIFVNEPELLHFSYVRFLENTIRQNFGFEGVPIVISTK 434
>gi|20808046|ref|NP_623217.1| GTP-binding protein EngA [Thermoanaerobacter tengcongensis MB4]
gi|26006716|sp|Q8R9J1.1|DER_THETN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|20516626|gb|AAM24821.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 439
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 242/468 (51%), Gaps = 53/468 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNR+++RR ++V + P VTRD G A+ + +F ++D+ GL+
Sbjct: 6 VAIVGRPNVGKSTLFNRILKRRISIVEDIP--GVTRDRIYGNAEWLNRKFILVDTGGLDP 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+ I + + +F++D R GL P D E+ LRK ++ I+ N
Sbjct: 64 DPKD-VIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEV--ILVCN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K +S S + LG G+PI ISA GLG+ EL D +++ L ++
Sbjct: 121 KVDSFKEMPASFY----DFFKLGLGEPIPISASNGLGIGELL--------DEVIKRLPEN 168
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ T +++A++GRPNVGKS+L+N +L E+RV+V G TRD+
Sbjct: 169 DVEYEEET--------------IKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDA 214
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ F GR L+DTAG R K + S+ SV+++ + RA + L++DA E
Sbjct: 215 IDTPFTKDGRNYILIDTAGI--RRKSRISESIERYSVLRALAAIERADICLLMIDATEGP 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+G++++VNK D++ N+ YK E + +++ ++ P+
Sbjct: 273 TEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNT--YKEYTEMIREKLAF----ISFAPI 326
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
+F SA G+ V+ V ++++ R+ T LN L + M +P KI Y
Sbjct: 327 LFISAKTGQRIHKVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFPPPSSKGRPIKIYYA 386
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTFV F++ + L + +RFL +++++F G+PI I+ +
Sbjct: 387 TQVGTKPPTFVIFVNEPELLHFSYVRFLENTIRQNFGFEGVPIVISTK 434
>gi|195952865|ref|YP_002121155.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932477|gb|ACG57177.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1]
Length = 429
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 246/477 (51%), Gaps = 65/477 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ ++I GR NVGKS LFN++ +RR ++V N P +TRD+ E A D FK++D+ G
Sbjct: 1 MEKIVITGRANVGKSTLFNKISKRRISIVENIP--GITRDVIESKAVFQDKVFKLVDTGG 58
Query: 180 L--ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
L E S +I D+ + IF++D ++GL P D ++ K L + ++
Sbjct: 59 LTDSKEEISQAIRDKVLKLYKEAYK----IIFVVDGKTGLMPEDKDIAKLLYPYKEKV-- 112
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
VA+NK T S +A+E LGF + ISA G G+ EL E +
Sbjct: 113 YVAVNK-------TDSKKASASEFYELGFDNVFEISATHGTGVFELLEEI---------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP-LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
T+D+ + E+ E K ++L+ VG+PN GKS+LLN++L++DRV+V A
Sbjct: 156 ------------TKDLKAMEELEEKADFIKLSFVGKPNSGKSSLLNSILKQDRVIVSNIA 203
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD+V V F Y+G+ LVDTAG + + G +V +S + + ++ V ALV+DA
Sbjct: 204 GTTRDAVDVEFSYEGKDFILVDTAGIRRPSNIDYGVEFFAVNRSLEAIEKSDVCALVIDA 263
Query: 416 EEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E + ++ G+GL+V++NK+DL+ EA+ + + + V
Sbjct: 264 TEGVSRQDMRLASLVNRKGKGLIVVLNKIDLIKDI----------EALKKHVDKKLEFVY 313
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKI 525
P V+ SA EG +++ + ID Y+++ + TS +NR + K++ + Q++ I
Sbjct: 314 FAPRVYVSAKEGINVFSILQKAIDIYEEYSKPIKTSYVNRVVEKILEEYP---QNSTKSI 370
Query: 526 K-YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
K Y+T +PPT V + K + LRF K L+E ++ P+ I + +K
Sbjct: 371 KVYYTVFSPKPPTIVLHTNNKDFWREDYLRFFEKKLREKLNINYAPLNIILKEHQKK 427
>gi|299067270|emb|CBJ38467.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum CMR15]
Length = 447
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 239/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + A + LG GDP AIS+ G G+ EL EAL
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRELVDEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + D +++ AIVGRPNVGKSTL+NAL+ E+RV+ G T
Sbjct: 161 -DLAFAERPELAEAAEGHDHGTRI----AIVGRPNVGKSTLVNALIGEERVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 216 RDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LV+ VNK D L G R+K + +++Q ++
Sbjct: 276 ISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDMERKLQF----LSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V + SA + G A+M V D Y ++LPT +L R L+ V + + ++PK++Y
Sbjct: 328 VHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQDAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 388 AHQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|381401188|ref|ZP_09926102.1| GTP-binding protein Der [Kingella kingae PYKK081]
gi|380833803|gb|EIC13657.1| GTP-binding protein Der [Kingella kingae PYKK081]
Length = 489
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 241/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL + ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ AAE L G+P IS G G+ L E + + D
Sbjct: 115 FLAVNKGEG-----GNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLENFPD---- 165
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
S E+ E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 166 ----------------ASDEEPENKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE + ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFERDNKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LV+ VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVIAVNKWDGISDER--------REQVKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ F SAL+ +G + + Y +++PT ++ R L+ + R +PK+
Sbjct: 321 AKLHFISALKEKGIDGLFDSIQAAYNAAFIKMPTPKITRVLQSAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q + PP V + + D+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGSNPPVIVIHGNSLHAIGDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|261400171|ref|ZP_05986296.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
gi|269210170|gb|EEZ76625.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
Length = 485
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 242/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L GDP IS G G+ L +ED +L
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGDPYVISGAHGDGVYYL-------IED-ILE 161
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + ++ V A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 162 TFPEPEKEEEAAKHPV-------------FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + +E V ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------REQVKRDISRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQTAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|238027075|ref|YP_002911306.1| GTP-binding protein Der [Burkholderia glumae BGR1]
gi|237876269|gb|ACR28602.1| GTP-binding protein EngA [Burkholderia glumae BGR1]
Length = 448
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 237/471 (50%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRTGARPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + AA+ LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVAADFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q S ED +++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 165 ----AGQPEES-------EDAAQSRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 214 TRDSIYVDFERNGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L +S +R K + ++++ +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVVGVNKWDGL----DSHARERTKADLTRKLKF----LEFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
F SA E G ++ V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KFHFISAAEKTGIGPLLRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPIIVIHGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRS 436
>gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4]
gi|166224317|sp|A4JEN6.1|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
Length = 445
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 240/470 (51%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + A + LG GDP AISA G G+T++ +
Sbjct: 117 VVNKAEGM-----KYTAVATDFYELGLGDPRAISAAHGDGVTDM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + +D++ +++AIVGRPNVGKSTL+NAL+ EDRV+ G T
Sbjct: 157 NEALEVAYAGQPE--EADDNDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 215 RDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LV+ VNK D L R K + ++++ + +
Sbjct: 275 ISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH-- 328
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
+ SA + G A+M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 329 --YISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPLIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|348590095|ref|YP_004874557.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
gi|347973999|gb|AEP36534.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
Length = 459
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 252/475 (53%), Gaps = 47/475 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL R R A+V + +TRD G ++GD F V+D+ G
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRNAIVADYSG--LTRDRHYGEGRVGDRPFLVIDTGGF 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + +G I+ A T ++++ IF++D RSG++ D E+ LRK + I+A
Sbjct: 63 EPKVKTG-IMKEMARQTELAISESDVVIFLVDARSGINAHDHEIAVKLRKVG--VPVILA 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR--PSVEDYMLR 297
+NK E L + A+AE LG G+P+AIS+ G G+ L E AL P VED
Sbjct: 120 VNKAEGLQ-----ASQASAEFHELGLGEPLAISSAHGDGVANLIEVALSKIPQVED---- 170
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + S++D + +E++ ++LA+VGRPNVGKSTL+N+LL E RV+
Sbjct: 171 -------ETSISSEDEVDSDSNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFD 223
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ + FE G+ L+DTAG +R K + SV+++ + + +VV L+L
Sbjct: 224 MPGTTRDAIEIDFESNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLIL 283
Query: 414 DAE-EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+ E+ +E GR LVV +NK D LS + +E V +E++ +
Sbjct: 284 DAQSEISEQDAHIAGFILESGRALVVAINKWDGLSEDK--------REWVIRELERKLRF 335
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-Q 522
++ V + SAL+ G +++ V ++ +L T +L R L+ + + + +
Sbjct: 336 LSFAKVHYISALKAYGIKSLLKSVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFR 395
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + + + D+ R+L ++ F L G P+RI +S
Sbjct: 396 PKMRYAHQGGQNPPLVIIHGNALDAIPDSYRRYLEARFRKVFKLEGTPLRIEFKS 450
>gi|148241565|ref|YP_001226722.1| GTP-binding protein EngA [Synechococcus sp. RCC307]
gi|166225929|sp|A5GR60.1|DER_SYNR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147849875|emb|CAK27369.1| GTP-binding protein engA [Synechococcus sp. RCC307]
Length = 452
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 244/491 (49%), Gaps = 63/491 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL R R+A+V++ P R +EG G F+V+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGF--WGGRTFRVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L + +A+ A+ ++D + GL D + WLR+ + ++
Sbjct: 61 LVFDDDS-EFLPEIREQASLAMAEACVALVIVDGQQGLTAADEAIAAWLRQQKCPV--LL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NKCES G AAE LG G+P ISA G G +L D +L
Sbjct: 118 GVNKCESPEQGLA----MAAEFWALGLGEPKPISAIHGAGTGDLL--------DQVL--- 162
Query: 300 NDSCTQNNSSTQDVTSPEDDE-SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D P+D+E + P+Q+AIVGRPNVGKS+LLN + E+R +V P G
Sbjct: 163 ------------DFLPPQDEEEAPEPIQMAIVGRPNVGKSSLLNTVCGENRAIVSPIRGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E +G++ L+DTAG +R GP + +S K + R+ V LV+DAEE
Sbjct: 211 TRDTIDTSIEREGQSWKLLDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAEE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R EEGR +V+VNK DL+ ++ A+ +E+++ + +
Sbjct: 271 GVTEQDQRLAGRIEEEGRACLVVVNKWDLVEKDSHTM------PAMEKELRSKLYFLEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++F SAL G+ + + ++ R+ T+ +N L++ + SW+ Q
Sbjct: 325 PMLFISALTGQRVERIFPLAVLAVEQHRRRVTTAVVNEVLQEAL---SWRSPPTTRGGRQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRS 577
++ Y TQV RPP+F F++ K D R++ + +++ G P+R+ QR
Sbjct: 382 GRLYYGTQVAVRPPSFTLFVNEPKLFGDTYRRYVERQIRQGLGFEGSPVRLFWRGKQQRD 441
Query: 578 VPRKCGSSSSR 588
R ++SR
Sbjct: 442 AERDQARAASR 452
>gi|452205560|ref|YP_007485689.1| GTP-binding protein EngA [Dehalococcoides mccartyi BTF08]
gi|452112616|gb|AGG08347.1| GTP-binding protein EngA [Dehalococcoides mccartyi BTF08]
Length = 442
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 240/480 (50%), Gaps = 62/480 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+ GL
Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFATVSWLDRRLIMVDTGGL 64
Query: 181 ETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + ++ G N+ + + + ++DV+ GL D E+ +R+
Sbjct: 65 DPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKDGLITPDYEMADIIRRTG--- 115
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP++ + NK ++L G A E LGFG+P ISA G G+++L + + + D
Sbjct: 116 KPVILVANKADNLKMGQ-----EATEFYSLGFGEPAVISAFHGTGISDLMDRVMEELPD- 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
Q + +PE+D S ++LA+VGR NVGKSTLLN L E+R +V
Sbjct: 170 ----------------QPIATPEEDTS---VKLALVGRTNVGKSTLLNTFLGEERSIVSN 210
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV LV+
Sbjct: 211 IPGTTRDAIDTPLDFDGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAIDRADVVLLVM 270
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 271 DTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRFKF 322
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQ 522
+ P++F S GRG ++ + ++ R+PT+++N + + + H+ Q Q
Sbjct: 323 LDYAPILFVSGKTGRGVDTIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGKVQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++ KC
Sbjct: 383 LKIFYATQAETNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGEKC 442
>gi|452204061|ref|YP_007484194.1| GTP-binding protein EngA [Dehalococcoides mccartyi DCMB5]
gi|452111120|gb|AGG06852.1| GTP-binding protein EngA [Dehalococcoides mccartyi DCMB5]
Length = 442
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 241/480 (50%), Gaps = 62/480 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+ GL
Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFATVSWLDRRLIMVDTGGL 64
Query: 181 ETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + ++ G N+ + + + ++DV+ GL D E+ +R+
Sbjct: 65 DPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKDGLITPDYEMADIIRRTG--- 115
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP++ + NK ++L G A E LGFG+P ISA G G+++L D
Sbjct: 116 KPVILVANKADNLKMGQ-----EATEFYSLGFGEPAVISAFHGTGISDLM--------DR 162
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+L L D Q + +PE+D S ++LA+VGR NVGKSTLLN L E+R +V
Sbjct: 163 VLEELPD---------QPIATPEEDTS---VKLALVGRTNVGKSTLLNTFLGEERSIVSN 210
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV LV+
Sbjct: 211 IPGTTRDAIDTPLDFDGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAIDRADVVLLVM 270
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 271 DTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRFKF 322
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQ 522
+ P++F S GRG ++ + ++ R+PT+++N + + + H+ Q Q
Sbjct: 323 LDYAPILFVSGKTGRGVDTIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGKVQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++ KC
Sbjct: 383 LKIFYATQAETNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGEKC 442
>gi|167562554|ref|ZP_02355470.1| GTP-binding protein EngA [Burkholderia oklahomensis EO147]
Length = 445
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 235/471 (49%), Gaps = 51/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGVRPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + A++ LG GDP AISA G G+T++ EAL +
Sbjct: 117 VVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q S E+D + +++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 165 ----AGQPEES-------EEDAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 214 TRDSIYVDFERNGKRYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQ 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 274 DISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERAKADLARKLKFLDFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
F SA E G +M V D Y +LPT +L R L V + + +PK++
Sbjct: 326 KSHFISAAEKTGIGPLMRSVDDAYAAAMKKLPTPKLTRALIDAVEFQQPRRRGPVRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 386 YAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
Length = 444
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 239/471 (50%), Gaps = 52/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFVVDGRNGLAPQDKTIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRV 298
+NK E + + AA+ LG GDP AISA G G++E+ +AL + D R
Sbjct: 117 VVNKAEGM-----KYSAVAADFYELGLGDPRAISAAHGDGVSEMIGQALAVAYAD---RA 168
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+D + +++AIVGRPNVGKSTL+NALL E+RV+ G
Sbjct: 169 PHDEAHAGHG----------------VKIAIVGRPNVGKSTLVNALLGEERVIAFDLPGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + FE QGR L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 213 TRDSIYIDFERQGRPYTLIDTAGLRKRGKVFEAVEKFSVVKTLQSIADANVVILLLDARQ 272
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VE+GR LV+ VNK D L + V+E ++ + +
Sbjct: 273 DISEQDAHIAGFVVEQGRALVIGVNKWD--------GLDEHVRERTKADLARKLKFLDFA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
+ SA E G A++ V Y +LPT +L R L V + + +PK++
Sbjct: 325 KSHYISAAEKTGIGALLRSVDAAYAAAMAKLPTPKLTRALIDAVQFQQPRRRGPVRPKLR 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + ++D R+L +E F L G P+RI RS
Sbjct: 385 YAHQGGQNPPIIVIHGNALDAITDTYKRYLEGRFRETFGLTGTPLRIEFRS 435
>gi|449448728|ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 660
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 265/534 (49%), Gaps = 83/534 (15%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LLP V I+GRPNVGKSA+FNRL+ A+V + P VTRD G + GD F V+D+
Sbjct: 155 HLLPRVAIVGRPNVGKSAMFNRLVGGNRAIVVDEP--GVTRDRLYGRSFWGDNEFMVVDT 212
Query: 178 AG-LETEATSGSILDR-----TAGMTANVLAKTQFA----------------------IF 209
G L T +++ T GM LA + A IF
Sbjct: 213 GGVLSVSKTQNDVIEELAISTTIGMDGIPLASREAAVARMPSMIERQATAAVEEASVVIF 272
Query: 210 MIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDP 269
++D ++GL D E+ WLR++ I+A+NKCES G A+E LGF P
Sbjct: 273 LVDGQAGLTAADEEIADWLRRNYSDKFTILAVNKCESPRKGMMQ----ASEFWSLGF-TP 327
Query: 270 IAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPED---DESKLPLQ 326
+ +SA +G G EL + L C S Q V S ED +E +P
Sbjct: 328 LPVSALSGTGTGELLDLL---------------C----SRLQKVESSEDLHEEEDYIP-A 367
Query: 327 LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQ-GRTVYLVDTAGWLQR 385
+AIVGRPNVGKS++LNAL+ EDR +V P +G TRD++ F Q G+ L+DTAG +R
Sbjct: 368 VAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGQDGQKFRLIDTAGIRRR 427
Query: 386 EKEKGPA----SLSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVIV 431
SLSV ++ + + R+ VVALV++A ++ + E EG+G +++V
Sbjct: 428 AAVASSGSMTESLSVNRAFRAIRRSDVVALVIEALACITEQDCKIAERIEKEGKGCLIVV 487
Query: 432 NKMDLLSGR-QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDT 490
NK D + + Q +A+Y Q+++ + + P+V+++A+ G ++
Sbjct: 488 NKWDTIPNKNQQTAMYYE------QDVREKLRCLDWAPIVYSTAIAGHSVDKIITAASAV 541
Query: 491 YQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTL 548
++ RL TS LN+ +++ + + + ++ Y TQ RPPTF+ F++ K
Sbjct: 542 EKERSRRLTTSILNQVVQEALAFKAPPRTRGGKRGRVYYCTQAAIRPPTFIFFVNDAKLF 601
Query: 549 SDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGRTFSDK 602
+ R++ K L+ + G PIR+ RS RK ++ T +V T D+
Sbjct: 602 PETYRRYMEKQLRANAGFPGTPIRLLWRS-RRKMEKGEAKGPTKTQVKLTQQDR 654
>gi|296133088|ref|YP_003640335.1| ribosome-associated GTPase EngA [Thermincola potens JR]
gi|296031666|gb|ADG82434.1| ribosome-associated GTPase EngA [Thermincola potens JR]
Length = 440
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 239/467 (51%), Gaps = 50/467 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNR+ R A+V + P VTRD A D F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIAGSRIAIVEDKP--GVTRDRIYKDAVWLDKEFTLVDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E GS+ D + + + +F++D RSGL D EV + LR KP++
Sbjct: 62 EFRDDKGSMSDLILQQARLAIEEAEVILFVVDARSGLTATDEEVARMLRNTK---KPVIL 118
Query: 241 M-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+ NK E TG++ + LG GDPI +SA GL + +L + + + +Y
Sbjct: 119 VANKVEDF---TGNMD--VYDFYRLGLGDPIMVSASHGLNVGDLLDEVVKHLPEYAAEEY 173
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D +++A++GRPNVGKS+++NALL E+RV+V AG T
Sbjct: 174 GDDV---------------------IKIAVIGRPNVGKSSIVNALLGEERVIVSDVAGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ +FE G+ L+DTAG ++ K P SV++S K + R+ VV +++DA+EV
Sbjct: 213 RDAIDTYFERGGQRYLLIDTAGMRKKGKIDEPTERYSVLRSLKAVDRSDVVLMIIDAQEV 272
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK DL+ + L R E + QE+ V P
Sbjct: 273 VTEQDKKIAGYAHEAGKAMVLVVNKWDLIKKDDKTTL--RYTEEIRQELGF----VQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V+F SAL + ++ V ++ +R+ TS LN +++ + + D+ + KI Y
Sbjct: 327 VIFVSALTWQRVPRILDLVNYVAEQHAMRVSTSNLNDLVQEAVRLNPPPSDKGRRLKILY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
TQ +PPTF+ F++ + + + R+L L+ F G PIR+
Sbjct: 387 ITQAGVKPPTFIIFVNDPELMHFSYQRYLENQLRATFGFEGTPIRMV 433
>gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
Length = 445
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 238/471 (50%), Gaps = 49/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R ALV + P +TRD G ++GD F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRAALVADYPG--LTRDRHYGEGRMGDRPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G +L A T +A++ +FM+D R G+ P D + +LRK + I+
Sbjct: 61 EPVVKEG-VLQEMAKQTKQAVAESDVVVFMVDGRQGITPHDKAITDYLRKCGRPV--ILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGM-TELYEALRPSVEDYMLRVL 299
+NK E + A+ LG GDP+ IS+ G G+ T L EAL
Sbjct: 118 VNKAEGM-----KYTAVVADFYELGLGDPLVISSAHGDGVHTLLEEAL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ T+D + E + P++LA+VGRPNVGKST++NALL E+RV+ G T
Sbjct: 161 -GKVPYAPAETEDGIAGE----QRPVRLAVVGRPNVGKSTMINALLGEERVIAFDLPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ + FE G+ LVDTAG +R K + SV+++ + + A+VV L+LDA++
Sbjct: 216 RDAIEIPFERDGKHYTLVDTAGLRKRGKVFQAIEKFSVVKTLQAISEANVVLLLLDAQQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ +E GR LVV +NK D L + + V E++ + ++
Sbjct: 276 ISEQDAHIAGFVLESGRALVVGINKWDGLPPDK--------RREVKAEVERKLHFLSFAK 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
+ SAL+ G A+M V Y +L T RL R L + + + + S +PK++
Sbjct: 328 FHYVSALKATGIGALMRSVDAAYAAAMAKLSTPRLTRVLEEAVEHQAPPRRQGSIRPKLR 387
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + + + D R+L K ++ F L G P+RI RS
Sbjct: 388 YAHQGGQNPPIIVIHGNSLENVGDDYKRYLEKHFRDAFSLTGTPLRIEFRS 438
>gi|78213545|ref|YP_382324.1| GTP-binding protein EngA [Synechococcus sp. CC9605]
gi|123577697|sp|Q3AI13.1|DER_SYNSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78198004|gb|ABB35769.1| Small GTP-binding protein domain [Synechococcus sp. CC9605]
Length = 455
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 239/493 (48%), Gaps = 64/493 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPG--VTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + GL D + ++LR H + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALEEASVALVIVDGQQGLTAADESIAEFLRSH--RCPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G A E LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLA----MAGEFWSLGLGEPHPISAIHGAGTGELL--------DQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D E + P+Q+AI+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDQEGDEEEPIQMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTSIIRENRPWRLVDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D L ++ A+ +E+++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDALEKDSHTMT------AMEKELRSKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVESIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRS 577
K+ Y TQV +RPP+F F++ K + R++ + ++E G P+R+ QR
Sbjct: 383 GKLYYGTQVASRPPSFTLFVNDPKMFGETYRRYVERQIREGLGFDGSPLRLFWRGKQQRD 442
Query: 578 VPRKCGSSSSRQN 590
R SR+
Sbjct: 443 AERDLARQQSRKG 455
>gi|57233850|ref|YP_182104.1| GTP-binding protein EngA [Dehalococcoides ethenogenes 195]
gi|57224298|gb|AAW39355.1| GTP-binding protein [Dehalococcoides ethenogenes 195]
Length = 441
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 242/483 (50%), Gaps = 62/483 (12%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
N P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFTTVSWLDRRLIMVDT 60
Query: 178 AGLETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA 232
GL+ + L+ G N+ + + + ++DV++GL D E+ +R+
Sbjct: 61 GGLDPD------LESIIGQQVNIQISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRTG 114
Query: 233 PQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
KP++ + NK ++L G AAE LGFG+P ISA G G+++L
Sbjct: 115 ---KPVILVANKADNLKMGQ-----EAAEFYSLGFGEPSVISAFHGSGISDLM------- 159
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D +L L D Q + +PE+D S ++LA+VGR NVGKSTLLN + ++R +
Sbjct: 160 -DRVLEELPD---------QPIATPEEDNS---VKLALVGRTNVGKSTLLNTFMGQERSI 206
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
V G TRD++ + G V L+DTAG +R K E G SV+++ K + RA +V
Sbjct: 207 VSNIPGTTRDAIDTPLNFNGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAVDRADIVL 266
Query: 411 LVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 267 LVMDTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSR 318
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ P++F S GRG ++ + ++ R+PT+++N + + + H+ Q
Sbjct: 319 FKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIPTAKVNSVVTEALSAHTPPHQG 378
Query: 521 -AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
Q KI Y TQ PP+FV F++ K + + RF+ L+E F G PIR+T ++
Sbjct: 379 KTQLKIYYATQADTNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARG 438
Query: 580 RKC 582
KC
Sbjct: 439 EKC 441
>gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
Length = 446
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 238/472 (50%), Gaps = 50/472 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R ALV + P +TRD G ++GD F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRAALVADYPG--LTRDRHYGEGRMGDRPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G ++ A T +A+ IF++D R G+ P D + +LRK + I+A
Sbjct: 61 EPVVKEG-VMQEMAKQTKQAVAEADVVIFIVDGRQGITPHDKAITDYLRKSGRPV--ILA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFG-DPIAISAETGLGM-TELYEALRPSVEDYMLRV 298
+NK E + A+ LG G DP+ IS+ G G+ T L EAL+
Sbjct: 118 VNKAEGM-----KYTAVVADFYELGLGSDPLVISSAHGDGVHTLLDEALK---------- 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + T+D E + + ++LAIVGRPNVGKST++NALL E+RV+ G
Sbjct: 163 ---MVPLSPAETED----EIESGQKHIKLAIVGRPNVGKSTMINALLGEERVIAFDLPGT 215
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + FE G+ LVDTAG +R K + SV+++ + + A+VV L++DA++
Sbjct: 216 TRDAIEIPFERDGKQYTLVDTAGLRKRGKVFQAIEKFSVVKTLQAISEANVVLLLMDAQQ 275
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ +E GR LVV +NK D L + ++ + E++ + ++
Sbjct: 276 DISEQDAHIAGFVLESGRALVVGINKWD--------GLDQDKRKEIKSEVERKLHFLSFA 327
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+ SAL+ G A+M + Y +L T RL R L + + K +PK+
Sbjct: 328 KFHYVSALKSTGISALMRSIDSAYAAAMAKLSTPRLTRVLEEAVEHQQPPRKQGGTRPKL 387
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + +SD R+L K ++ F L G P+RI RS
Sbjct: 388 RYAHQGGQNPPIIVIHGNSLDAISDDYKRYLEKHFRDAFSLTGTPLRIEFRS 439
>gi|189500937|ref|YP_001960407.1| GTP-binding protein EngA [Chlorobium phaeobacteroides BS1]
gi|238692267|sp|B3EMI7.1|DER_CHLPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189496378|gb|ACE04926.1| small GTP-binding protein [Chlorobium phaeobacteroides BS1]
Length = 435
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 242/470 (51%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL R + A+ +TP VTRD A+ +F V+D+ G
Sbjct: 3 PLVALVGRPNVGKSTLFNRLSRSKSAITDSTP--GVTRDRHIASAEWQGRKFMVMDTGGY 60
Query: 181 --ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ ++ + +++++T +A+ +FM+DVRSGL LDL++ + L+K+
Sbjct: 61 CHDKDSLNRAMMEQTLA----AIAEADVILFMVDVRSGLAYLDLDMSRMLKKNFRDKPVY 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E T LA E G +P ISA G G+ +L + + S D
Sbjct: 117 LVVNKVE-----TRQLAFEGEEFRRTGLTEPWFISAREGNGVADLLDEVVASFPDE---- 167
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
T+ E+D + ++LAI+GRPNVGKS+ +NALL +R +V G
Sbjct: 168 ---------------TTEEEDTA---IKLAIIGRPNVGKSSFVNALLGTNRHIVSDIPGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + G+ V L+DTAG +R K ++G S +++ K++ R V L++DAE+
Sbjct: 210 TRDAIDSRLKRNGKEVLLIDTAGLRKRTKIDRGIEFYSSVRTDKSIERCDVALLLIDAEQ 269
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E+ +G+V++VNK DL+ N++ + I I ++ I
Sbjct: 270 GLEKQDIKIIQMAAEKRKGIVILVNKWDLIEKETNTS------KQYSDRIYDQIGNLSWI 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
PV+F SAL + + ++T Q ++ TS LNR+L++V+ +S + KIK
Sbjct: 324 PVLFISALTKKNLYRAIDTALETGQNRQKKISTSELNRFLQQVLSELPPSTKSGRELKIK 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ+ A P F F + + RFL K L++ FD G+P+ R
Sbjct: 384 YVTQIGAHYPVFAFFCNNPDLVLSNYKRFLEKRLRQTFDFTGVPVSFRYR 433
>gi|99034460|ref|ZP_01314456.1| hypothetical protein Wendoof_01000738 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 405
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 240/432 (55%), Gaps = 56/432 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNRL+ R+ A+V N P VTRD REG+ ++ DL FKV+D+ G
Sbjct: 4 IAIVGLPNAGKSTLFNRLVGRKAAVVSNIPG--VTRDRREGMGRISDLEFKVIDTGGWND 61
Query: 183 EAT-SGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ S ++++ +N + F++D + + + E KWL++ KP++ +
Sbjct: 62 QTNFSLQVIEQIEFSLSN----SNIIFFLVDAKVQ-NERNEEFAKWLKRKIN--KPVILV 114
Query: 242 -NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NKCES H + L F P+ ISAE LGM +LY+AL +E++
Sbjct: 115 ANKCES-HKSEN------VDYLQFFDFLGPVYISAEHNLGMVDLYDALAGVIENF----- 162
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N +T+ P ++ S+L ++AI+GRPNVGKST LN LL E+R++ E G T
Sbjct: 163 -------NENTE---LPNNELSRL--RIAIIGRPNVGKSTFLNGLLAENRLITSSEPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDA-- 415
RDSV + +++ G + L+DTAG ++R+ G S V +S +++ R+HVV L+LD+
Sbjct: 211 RDSVDITYDHDGELITLIDTAG-IRRKANVVDGLESRFVEKSMESIKRSHVVVLMLDSLV 269
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++ A++ G+G++V++NK DL+ S L K VK+ QE+ + +V
Sbjct: 270 GIEQQDLSIGEAAIKGGKGIIVVLNKWDLIGKDDRSRLIKFVKQ---QEVTRLFLEV--- 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P + SAL+G V+ + ++ + ++ T++LN+WL +G+HS + K+K
Sbjct: 324 PTITISALKGMRCGDVIDKCLEVSESLNKKISTAKLNKWLIDAVGKHSHPLVKGKAVKMK 383
Query: 527 YFTQVKARPPTF 538
Y Q+ +PP F
Sbjct: 384 YIAQIGTKPPAF 395
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++AIVG PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKIAIVGLPNAGKSTLFNRLVGRKAAVVSNIPGVTRDRREGMGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L ++++ ++DA+
Sbjct: 60 --NDQTNFSLQVIEQIEFSLSNSNIIFFLVDAK 90
>gi|427401453|ref|ZP_18892525.1| GTPase Der [Massilia timonae CCUG 45783]
gi|425719562|gb|EKU82494.1| GTPase Der [Massilia timonae CCUG 45783]
Length = 445
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 237/469 (50%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRIGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T +A+ +F++D R GL P D + +LRK ++ ++
Sbjct: 61 EPVAKEG-IMHEMALQTRQAVAEADVVVFIVDGRQGLTPHDKTITDYLRKSGRKV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG GDP ISA G G V D + L+
Sbjct: 118 VNKSEGM-----KYTSVTADFYELGMGDPYVISAAHGDG-----------VHDLVNEALD 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ Q +++ P D K+ AIVGRPNVGKSTL+N L+ E RV+ G TR
Sbjct: 162 IAFAQRPDEPEEL-EPADHGFKI----AIVGRPNVGKSTLINTLVGEQRVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DAIEVPFERDGKKYTLIDTAGIRRRGKIFEAIEKFSVVKTMQSISDANVVILLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L Q ++ V ++ + +
Sbjct: 277 SEQDAHIAGFILESGRALVVAVNKWDGLQTDQ--------RDQVKNDLDRKLDFLGFAKT 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ-SAQPKIKYF 528
F SAL G G ++ V Y L T RL R L++ + + K + +++PK++Y
Sbjct: 329 HFVSALRGTGISQLLKSVESAYAAATANLSTPRLTRALQEAVEKQEPKRKGTSRPKMRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + +++ R+L K ++ F+L G P+RI RS
Sbjct: 389 HQGGQNPPIIVIHGNALEGITEPYKRYLEKHFRDTFNLVGTPLRIELRS 437
>gi|300691802|ref|YP_003752797.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum PSI07]
gi|299078862|emb|CBJ51523.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum PSI07]
gi|344166991|emb|CCA79182.1| GTPase involved in ribosome synthesis and maintenance [blood
disease bacterium R229]
Length = 447
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 242/469 (51%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F +D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADIPG--LTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + IF++D R GL P D + +LRK +I ++A
Sbjct: 61 EPVAKEG-IVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRI--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A + LG GDP AIS+ G G+ +L ++
Sbjct: 118 VNKAEGM-----KYTAVATDFYELGLGDPRAISSAHGDGVRDL---------------VD 157
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ + ++ +D ++AIVGRPNVGKSTL+NAL+ E+RV+ G TR
Sbjct: 158 EALDLAFAERPELAEAAEDHG-YGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ VE GR LV+ VNK D L G R+K + +++Q ++ V
Sbjct: 277 SDQDAHIAGFIVESGRALVIGVNKWDGLDGHARD----RIKHDLERKLQF----LSFANV 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYF 528
+ SA + G A+M V D Y ++LPT +L R L++ V + + ++PK++Y
Sbjct: 329 HYISAKQRSGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP V + + + RFL ++ F L G P+RI R+
Sbjct: 389 HQGGSNPPIVVIHGNALSNIPETYRRFLEGRFRDAFQLKGTPLRIEFRT 437
>gi|289433056|ref|YP_003462929.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT]
gi|288946776|gb|ADC74473.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT]
Length = 442
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 241/480 (50%), Gaps = 62/480 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GR NVGKS L NRL + A+ + P TRD D R ++D+ GL
Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFATVSWLDRRLIMVDTGGL 64
Query: 181 ETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + ++ G N+ + + + ++DV+ GL D E+ +R+
Sbjct: 65 DPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKDGLITPDYEMADIIRRTG--- 115
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP++ + NK ++L G A E LGFG+P ISA G G+++L D
Sbjct: 116 KPVILVANKADNLKMGQ-----EATEFYSLGFGEPAVISAFHGTGISDLM--------DR 162
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+L L D Q + +PE+D S ++LA+VGR NVGKSTLLN L E+R +V
Sbjct: 163 VLEELPD---------QPIATPEEDTS---VKLALVGRTNVGKSTLLNTFLGEERSVVSN 210
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV LV+
Sbjct: 211 IPGTTRDAIDTPLDFDGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAIDRADVVLLVM 270
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 271 DTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRFKF 322
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQ 522
+ P++F S GRG ++ + ++ R+PT+++N + + + H+ Q Q
Sbjct: 323 LDYAPILFVSGKTGRGVDTIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGKVQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++ KC
Sbjct: 383 LKIFYATQAETNPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGEKC 442
>gi|427704197|ref|YP_007047419.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
gi|427347365|gb|AFY30078.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
Length = 454
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 236/473 (49%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V +IGRPNVGKS L NRL R REA+V++ P R +EG GD F+V+D+ G
Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGF--WGDRTFRVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L LA+ A+ ++D + G+ D + +WLR H + ++
Sbjct: 61 LVFDDDS-EFLPEIREQANLALAEASVAVVIVDGQQGVTAADESIAEWLRGH--NVPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NKCES G AA+ LG G+P ISA G G +L D ++ L
Sbjct: 118 GVNKCESPDQGLA----MAADFWGLGLGEPHPISAIHGAGTGDLL--------DRVISFL 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ E DE++ P+QLAI+GRPNVGKS+LLNA+ E+R +V P G T
Sbjct: 166 P-------------ATTETDEAE-PIQLAIIGRPNVGKSSLLNAICGENRAIVSPIRGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E +G T L+DTAG +R + GP + +S K + R+ V LV+DA +
Sbjct: 212 RDTIDTTLEREGLTWKLIDTAGIRRRRSVDYGPEYFGITRSFKAIERSDVCILVIDALDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R E+GR V+VNK D + ++ A+ +E++ + + P
Sbjct: 272 VTEQDQRLAGRIEEDGRACAVVVNKWDAIEKDSHTM------SAMEKELRAKLYFLDWAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QP 523
++FTSAL G+ ++ ++ R+ TS +N L++ + W+ Q
Sbjct: 326 MLFTSALTGQRVESIFAIAAVAVEQHRRRVSTSVVNEVLQEAL---RWRSPPTTRGGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++ Y TQV RPP+F F++ K D R++ + ++E G P+R+ R
Sbjct: 383 RLYYGTQVATRPPSFTLFVNDPKLFGDTYRRYVERQIREALGFEGSPVRLFWR 435
>gi|390559319|ref|ZP_10243665.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
gi|390174121|emb|CCF82958.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
Length = 497
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 237/482 (49%), Gaps = 60/482 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRLI R A+V + P TRD G + + F ++D+ GL
Sbjct: 56 PLVAIVGRPNVGKSTLFNRLIGERRAIVEDLPG--TTRDRLYGETEWNGVTFGLIDTGGL 113
Query: 181 ETEA-----TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+++A +S I+ T L + +F++D ++G+ DLEV LR+
Sbjct: 114 QSDAEIEGASSVEIVRATQEQAGLALEEADLILFLVDAQAGITAGDLEVADLLRRTR--- 170
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KPI V NK ES N S E LG GD +SA G+G+ +L +A+
Sbjct: 171 KPIYVVANKAESRVNQESSF-----EFYELGLGDVFPVSAIHGMGIGDLLDAI------- 218
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
T+++ E E +AIVGRPNVGKS +LNA+L R +V P
Sbjct: 219 ---------------TEELPIAEAAEEPDVPAIAIVGRPNVGKSAILNAILGRGRQIVSP 263
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD+V + G V L+DTAG +R + E+G SV+++ + + RA V LVL
Sbjct: 264 IPGTTRDAVDTELVWSGVPVVLIDTAGIRRRGRVERGIEKYSVLRASRAISRADVAILVL 323
Query: 414 DAEEVRAV----------EEGRGLVVIVNKMDLL--SGRQNSALYKRVKEAVPQEIQTVI 461
DA E E+ +G+V+++NK DL+ +G ++ +EA +
Sbjct: 324 DATEPFTAQDLHVAGYVEEQKKGIVLVINKWDLIEKTGETMGEFLEKAREAF-----DFM 378
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
P V+FTSAL G+ +M ++ + R+ T LNR LR+ + RH +
Sbjct: 379 PYAQ---VIFTSALTGQRIPKIMDAALEVISERNKRISTGELNRMLREALHRHPPPSKPG 435
Query: 522 Q-PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K Y TQ PPTFV F + + + + R+L +++E F G PI + R PR
Sbjct: 436 KWVKFYYVTQASVAPPTFVFFTNYPENVHFSYRRYLENTIREQFGFEGTPIVLRFRGRPR 495
Query: 581 KC 582
+
Sbjct: 496 EV 497
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P + I+GRPNVGKSA+ N ++ R +V +P TRD + + ++D+AG
Sbjct: 233 VPAIAIVGRPNVGKSAILNAILGRGRQIV--SPIPGTTRDAVDTELVWSGVPVVLIDTAG 290
Query: 180 LETEATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ +++ + + A+ +++ AI ++D DL V ++ + I +
Sbjct: 291 IRRRGRVERGIEKYSVLRASRAISRADVAILVLDATEPFTAQDLHVAGYVEEQKKGI--V 348
Query: 239 VAMNKCESLHNGTGSLAGAAAESL-----MLGFGDPIAISAETGLGMTELYEA 286
+ +NK + + TG G E + + I SA TG + ++ +A
Sbjct: 349 LVINKWDLIEK-TGETMGEFLEKAREAFDFMPYAQVIFTSALTGQRIPKIMDA 400
>gi|393778490|ref|ZP_10366763.1| EngA protein [Ralstonia sp. PBA]
gi|392714528|gb|EIZ02129.1| EngA protein [Ralstonia sp. PBA]
Length = 447
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 236/470 (50%), Gaps = 48/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRIGERPFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + +F++D R GL P D + +LRK Q+ ++
Sbjct: 61 EPVAKDG-IMAEMAKQTRQAVVEADTVVFIVDGRLGLAPQDRVIADYLRKTGRQV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVL 299
+NK E + + A+ LG GDP+ ISA G G+ EL EA+
Sbjct: 118 VNKAEGM-----KYSSVTADFYELGLGDPLVISAAHGDGVAELVDEAI------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D Q + E D+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G T
Sbjct: 161 -DLAIQQKPELAE----EPDDGTQGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTT 215
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 216 RDAIYVPFERGGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDARQD 275
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE GR LVV VNK D L G ++ + +++ + ++
Sbjct: 276 VSEQDAHIAGFIVESGRALVVGVNKWDGLDG--------HTRDRIKADMERKLKFLSFAN 327
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQPKIKY 527
F SA+E G +M + Y ++L T RL R + V + + ++PK++Y
Sbjct: 328 FHFISAVERTGIGPLMKSIDAAYAAAMVKLSTPRLTRVMMEAVEFQQPRRAGVSRPKLRY 387
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP + + + D R+L + F L G P+RI R+
Sbjct: 388 AHQGGSNPPIIIIHGNALSAIPDTYKRYLEGRFRAAFQLKGTPLRIEFRT 437
>gi|260434834|ref|ZP_05788804.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
gi|260412708|gb|EEX06004.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
Length = 455
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 239/493 (48%), Gaps = 64/493 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPG--VTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + GL D + ++LR H + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALEEASVALVIVDGQQGLTAADESIAEFLRSH--RCPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G A E LG G+P ISA G G EL D +L
Sbjct: 119 VNKCESPEQGLA----MAGEFWSLGLGEPHPISAIHGAGTGELL--------DQVLTFF- 165
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
SP+D E + P+Q+AI+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------SPKDQEGDEEEPIQMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTSIIRENRPWRLVDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A+ +E+++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMT------AMEKELRSKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVESIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRS 577
K+ Y TQV +RPP+F F++ K + R++ + ++E G P+R+ QR
Sbjct: 383 GKLYYGTQVASRPPSFTLFVNDPKLFGETYRRYVERQIREGLGFDGSPLRLFWRGKQQRD 442
Query: 578 VPRKCGSSSSRQN 590
R SR+
Sbjct: 443 AERDLARQQSRKG 455
>gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
Length = 433
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 244/472 (51%), Gaps = 63/472 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
+ I+GRPNVGKS LFNRL R+A+V DD VTRD G+A+ D +F V+D+ G
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIV----DDFSGVTRDRHYGVAEWTDKQFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
A S + + A + V+ + A +FM+DV +G+ LD E+ + LR+ KP
Sbjct: 61 V--ANSEDVFE--AAIREQVIIAIEEATVLLFMVDVTTGITDLDDEIAQLLRRSK---KP 113
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ + +NK ++ L AA G G+ IS+ TG G +L + + ED
Sbjct: 114 VFIVVNKVDNTQ-----LQNDAAVFYGFGLGEIHPISSMTGSGTGDLLDEVIKHFEDV-- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
PE+ E+ LP ++ IVGRPNVGKS+L+NAL+ ++R +V P A
Sbjct: 167 -------------------PEE-ENALP-KITIVGRPNVGKSSLINALMGKERNIVTPIA 205
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA 415
G TRDS+ +H+ G +DTAG ++ K K SVM++ K L A VV L++DA
Sbjct: 206 GTTRDSIHIHYNQFGHEFMFIDTAGLRKKTKVKENIEFYSVMRTIKALEEADVVILMIDA 265
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A + +G+V++VNK DL+ +NS ++ + Q++Q T
Sbjct: 266 MEGLESQDVNIFHLAEKNKKGIVILVNKWDLV--EKNSKTVNIFEDQIRQKLQP----FT 319
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPK 524
IP++F SAL + + +D ++ ++PTS+LN + ++ + + K
Sbjct: 320 DIPIIFISALNKQRIFQAVETALDVFKNRGKKIPTSKLNDVMLPIIENYPPPALKGKYIK 379
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+KY TQ+ A P F F + + + + RF+ L+E+FD G+PI+I R
Sbjct: 380 VKYITQINASSPMFAFFCNLPQYIKEPYKRFIENKLRENFDFSGVPIQIYFR 431
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLD 176
N LP + I+GRPNVGKS+L N L+ + +V TP TRD I + G F +D
Sbjct: 171 NALPKITIVGRPNVGKSSLINALMGKERNIV--TPIAGTTRDSIHIHYNQFGH-EFMFID 227
Query: 177 SAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+AGL + ++ + M T L + I MID GL D+ + K+ I
Sbjct: 228 TAGLRKKTKVKENIEFYSVMRTIKALEEADVVILMIDAMEGLESQDVNIFHLAEKNKKGI 287
Query: 236 KPIVAMNKCESLHNGTGSL 254
++ +NK + + + ++
Sbjct: 288 --VILVNKWDLVEKNSKTV 304
>gi|424776097|ref|ZP_18203082.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
gi|422888557|gb|EKU30943.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
Length = 452
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 241/473 (50%), Gaps = 45/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GR NVGKS LFNRL R R ALV N P +TRD G ++G + V+D
Sbjct: 4 VSFKPVVALVGRANVGKSTLFNRLTRSRAALVANFPG--LTRDRHYGEGRVGSRPYIVVD 61
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A +G +L+ A T +A+ +F++D R G++ LDLE+ + LRK ++
Sbjct: 62 TGGFEPVAKTGMLLE-MARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKV- 119
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G + E LG G P ISA G G+ EL
Sbjct: 120 -LLAVNKAEGMRYEAGGV-----EFHELGLGQPYLISASHGDGVEEL------------- 160
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+N + Q + + +DDE + ++LAIVGRPNVGKSTL+N L+ EDRV+ +
Sbjct: 161 --INLALEQVPNPEPEEDGQDDDEFQHRIKLAIVGRPNVGKSTLINTLVGEDRVIAFDQP 218
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE G L+DTAG +R K + SV+++ + + +VV L++DA
Sbjct: 219 GTTRDAIEIEFERNGVEYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDA 278
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E+ VE GR LVV +NK D L Q +E + +E + +
Sbjct: 279 HTEISDQDASIAGFVVETGRALVVGINKWDGLDEYQ--------REWIKREFDRKLRFLN 330
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL+G+G ++ V + +L T +L R +++ + + + +PK
Sbjct: 331 FAKMHTLSALKGQGINPLLKSVNAAHAAAFSKLSTPKLTRVMQEAVEQQQPPRKGIFRPK 390
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +SD+ R+L +E F L G P+RI +S
Sbjct: 391 LRYAHQGGMNPPIVVIHGNALDAISDSYRRYLETRFREAFKLEGTPLRIEFKS 443
>gi|82703488|ref|YP_413054.1| GTP-binding protein EngA [Nitrosospira multiformis ATCC 25196]
gi|123768150|sp|Q2Y6F9.1|DER_NITMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|82411553|gb|ABB75662.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC
25196]
Length = 466
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 240/470 (51%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GR NVGKS LFNRL R R+ALV + P +TRD G KLGD + V+D+ G
Sbjct: 3 PTLVLVGRSNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGHGKLGDRPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E AT G IL A T + + +F++D RSGL D V + LR+ + ++A
Sbjct: 61 EPMATEG-ILHEMAKQTLQAIDEADVVLFIVDGRSGLTAQDKIVAEQLRRSGR--RTLLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + +++ AE LG G+P AISA G + EL +++D+
Sbjct: 118 VNKTEGM-----AVSVVTAEFHELGLGEPCAISAAHGDNVNELVTL---ALQDF-----P 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D Q +DD K+ AIVGRPNVGKSTL+N LL E+RV+ + G TR
Sbjct: 165 DEPEQER---------KDDHPKI----AIVGRPNVGKSTLVNTLLGEERVIAFDQPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD-AEEV 418
DS+ + FE GRT L+DTAG +R K ++ SV+++ + + A+VV LVLD A E+
Sbjct: 212 DSIYIDFERNGRTYTLIDTAGLRRRGKVQETVEKFSVVKTLQAIEDANVVILVLDAASEI 271
Query: 419 R---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+E GR LV+ VNK D L Q ++ + ++I +P +
Sbjct: 272 SDQDAHIGGFILEAGRALVLAVNKWDSLDEYQ--------RDMIKRDINRKLPFLQNFAR 323
Query: 470 V-FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+ SAL G G ++ V Y LPT RL R L + + + ++PK++Y
Sbjct: 324 FHYISALHGTGTKGLLPSVDAAYGAAMAHLPTPRLTRTLLAAVEKQPPPRAGMSRPKLRY 383
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q + PP + S + R+L + ++ F L G P+RI R+
Sbjct: 384 AHQGGSNPPLIIIHGSALNAVPQTYQRYLENTFRDTFGLEGTPLRIEFRT 433
>gi|145351972|ref|XP_001420333.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580567|gb|ABO98626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 555
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 241/499 (48%), Gaps = 63/499 (12%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
D++K+ LP V ++GRPNVGKSALFNRL + A+VY+ P VTRD A G+
Sbjct: 77 DWSKVPDEALPRVAVVGRPNVGKSALFNRLTGTKRAIVYDEP--GVTRDRMYVRAYWGEH 134
Query: 171 RFKVLDSAGLET---EATSGSILDRTAGM----------TANVLAKTQFAIFMIDVRSGL 217
F ++D+ GLE G D G+ A + + IF++D + GL
Sbjct: 135 EFMMVDTGGLENLPANPEGGPKTDTVGGVEILPGMIEAQAAEAVREASVLIFVVDGQVGL 194
Query: 218 HPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETG 277
D+++ WLR+ +I +A+NKCES G + E LG P+A+SA +G
Sbjct: 195 TAADMDIFAWLRRTHSKIPLHLAVNKCESTTKGEDQIL----EFWSLGDVTPLAVSAISG 250
Query: 278 LGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGK 337
G EL L++ C Q +E +P+ +AI+GRPNVGK
Sbjct: 251 TGTGEL---------------LDNMCATLPPPPQVSEDENAEEEDIPVTVAIIGRPNVGK 295
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVR--VHFEYQGRTVYLVDTAGWLQREKEK----GP 391
S+LLN L E R +V +G TRDS+ V +Y GR L+DTAG +R + K G
Sbjct: 296 SSLLNGLAGEARSIVSDFSGTTRDSIDTLVEDKYTGRKFTLIDTAGIRRRTQVKSGTDGA 355
Query: 392 ASLSVMQSRKNLMRAHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQ 441
LSV ++ + + RA VV LV+D E RA +EG +V+ +NK DL+ +
Sbjct: 356 EKLSVGRALQAMKRADVVVLVIDGTEGPSQQDFVLAERATQEGCAIVLCINKWDLVD-KD 414
Query: 442 NSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTS 501
+ K +++ + +V+TSAL G+ ++ + RL T+
Sbjct: 415 THTMNKYT-----DDMRLKLRVFEYAEIVYTSALTGQRIQKILDAAQVASENHRKRLTTA 469
Query: 502 RLNRWLRKVMGRHSWK----DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLT 557
LN +++ WK S + KI Y TQ RPPTFV F++ K D R++
Sbjct: 470 TLNSVVQEAT---LWKLPPSRNSRKGKIYYITQASIRPPTFVFFVNDPKLFPDTYRRYME 526
Query: 558 KSLKEDFDLGGIPIRITQR 576
+ L+E+ G PIR+ R
Sbjct: 527 RQLRENIGFPGTPIRLLWR 545
>gi|320451137|ref|YP_004203233.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01]
gi|320151306|gb|ADW22684.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01]
Length = 432
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 242/467 (51%), Gaps = 57/467 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+ +R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRSAVVADVPG--VTRDLKEGVVESEKGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA-PQIKPIVA 240
SG ++ + L + +F +D RS L D EV ++LRK P I +VA
Sbjct: 60 --WSGDRWEKKIQEKVDQALEDAEVVLFAVDGRSELTQADYEVAEYLRKKGRPVI--LVA 115
Query: 241 MNKCESLH-NGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+ H + G L LGFGDPI S+E G+ EL EA +
Sbjct: 116 TKVDDPKHEHYLGPLYA-------LGFGDPIPTSSEHARGLEELLEA-----------IW 157
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ S +V ++LAIVGRPN GKS+LLNA+L E+RV+V E G T
Sbjct: 158 EKLPVRHIESEPEVAG---------IKLAIVGRPNAGKSSLLNAILGEERVIVSEEPGTT 208
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV- 418
RD++ VHF ++G+ LVDTAG +++ E L++ +S K + A VV LV+D +V
Sbjct: 209 RDAIDVHFTFRGQPFVLVDTAG-IRKRPESLVEELAIRRSLKAIEEADVVLLVVDPFQVG 267
Query: 419 --------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
A+E G+ +++++ K DL+ + + + +KE + + +P V
Sbjct: 268 DRELKLANHALEAGKPVLLVITKWDLVRKEEAPKVRRELKEK--------LAHLEHLPRV 319
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
+TSA + + + + ++ R+PT+ LNRWL + + +P KI Y T
Sbjct: 320 YTSAFTKQNLDKIFSEAVRLFELNHTRIPTAELNRWLSVWTAKVQLPNFKGKPLKIFYAT 379
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 380 QPEVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLKEVPFRLVFR 426
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 19/123 (15%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL + +V G+TRD E + LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLGKRSAVVADVPGVTRDLKEGVVESEKGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEKGPASLS-------VMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVN 432
W ++ +EK +L + R L +A AE +R ++GR ++++
Sbjct: 63 DRWEKKIQEKVDQALEDAEVVLFAVDGRSELTQADYEV----AEYLR--KKGRPVILVAT 116
Query: 433 KMD 435
K+D
Sbjct: 117 KVD 119
>gi|296314652|ref|ZP_06864593.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
43768]
gi|296838560|gb|EFH22498.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
43768]
Length = 485
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 244/468 (52%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ L +ED +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVYYL-------IEDIL-- 160
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
T + E++E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 161 -----------ETFPESEKEEEEAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S +E + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEEH--------REQIKRDISRKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
F SAL+ RG + + Y +++PT ++ R L+ + R +PK+
Sbjct: 321 AKFHFISALKERGIDGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|347755143|ref|YP_004862707.1| ribosome-associated GTPase EngA [Candidatus Chloracidobacterium
thermophilum B]
gi|347587661|gb|AEP12191.1| ribosome-associated GTPase EngA [Candidatus Chloracidobacterium
thermophilum B]
Length = 479
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 244/482 (50%), Gaps = 69/482 (14%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
+V+I+GRPNVGKS LFN+L+ RR+A+V + P +TRD G+ + F+++D+ G+
Sbjct: 43 SVVILGRPNVGKSTLFNKLVGRRQAIVGDEPG--ITRDRHYGVVEWLGRSFELVDTGGI- 99
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAPQ 234
+ D A + AN+ + AI +++D R G+ PLD E+ + +
Sbjct: 100 -------VPDEEAIIPANIFKQASRAIEEADLLLWVVDAREGITPLDEEIARHIHTTG-- 150
Query: 235 IKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
KP+ V NK ES T AA E GF +SAE G G EL D
Sbjct: 151 -KPVFVVANKVESAQVRT-----AAGEFYRFGFDRLFPVSAEHGTGTAELL--------D 196
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+L V N T S + +++A++GRPNVGKS+L+NA+L E+RV+V
Sbjct: 197 EILAVTNAPATAVRPSER-------------IRVAVIGRPNVGKSSLVNAILGEERVIVS 243
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALV 412
P G TRD++ + GR L+DTAG ++ + A LSV+ +RK L R V L+
Sbjct: 244 PIPGTTRDAIDTDLIHNGRPFTLIDTAGIRRKGRTTAMAEKLSVIMARKALARTDVAILL 303
Query: 413 LDA-------EEV---RAVEEGRGLVVIVNKMDLLSGRQNSA-LYKRVKEAVPQEIQTVI 461
LDA +EV A+E G +++ +NK DL+ ++A LY+R +++ +
Sbjct: 304 LDAVEGPTHLDEVIAGYALESGTSILIALNKWDLIKKDAHTASLYER-------QLRERV 356
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
+ P VF SAL G+ ++ Y R+PT LNR+ + + +
Sbjct: 357 KFLDYAPAVFVSALTGQRVTRLLDLAARAYDARYRRIPTGELNRFFAEYLETPRATLPTN 416
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+P K+ Y TQ ++ PPTFV F + + L + +R++ L+E+FD P+RI R PR
Sbjct: 417 KPVKVHYVTQARSVPPTFVLFTNTTEKLHFSYVRYVENRLRENFDFFATPLRIVSR--PR 474
Query: 581 KC 582
Sbjct: 475 TA 476
>gi|261365613|ref|ZP_05978496.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
gi|288565845|gb|EFC87405.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
Length = 485
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 241/470 (51%), Gaps = 57/470 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKIGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G+ A AAE L G+P IS G G+ L E +
Sbjct: 115 YLAVNKGEG-----GNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ PE +E+ K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 160 ------------LEKFPEPEAEETEVKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 207 AGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLD 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LVV VNK D +S + +E + ++I + +
Sbjct: 267 AQQDIADQDATIAGFALEAGRALVVAVNKWDGIS--------EEWREQIKRDISRKLYFL 318
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
F SAL+ RG + + Y +++ T ++ R L+ + R +P
Sbjct: 319 DFAKFHFISALKERGIDGLFDSIQAAYNAAMIKMSTPKITRVLQSAIERQQPPRAGLVRP 378
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 379 KMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|393757568|ref|ZP_10346392.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393165260|gb|EJC65309.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 452
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 242/473 (51%), Gaps = 45/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GR NVGKS LFNRL R R ALV N P +TRD G ++G + V+D
Sbjct: 4 VSFKPVVALVGRANVGKSTLFNRLTRSRAALVANFPG--LTRDRHYGEGRVGSRPYIVVD 61
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A +G +L+ A T +A+ +F++D R G++ LDLE+ + LRK ++
Sbjct: 62 TGGFEPVAKTGMLLE-MARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKV- 119
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G + E LG G P ISA G G+ EL
Sbjct: 120 -LLAVNKAEGMRYEAGGV-----EFHELGLGQPYLISASHGDGVEEL------------- 160
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+N + Q S D +D++ + ++LAIVGRPNVGKSTL+N L+ E+RV+ +
Sbjct: 161 --INLALEQVPSPEPDQDGQDDEQFQHRIKLAIVGRPNVGKSTLINTLVGEERVIAFDQP 218
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE G L+DTAG +R K + SV+++ + + +VV L++DA
Sbjct: 219 GTTRDAIEIEFERNGVEYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDA 278
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E+ VE GR LVV +NK D L Q +E + +E + +
Sbjct: 279 HTEISDQDASIAGFVVETGRALVVGINKWDGLDEYQ--------REWIKREFDRKLRFLN 330
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL+G+G ++ V + + +L T +L R +++ + + + +PK
Sbjct: 331 FAKMHTLSALKGQGINPLLKSVNEAHAAAFSKLSTPKLTRVMQEAVEQQQPPRKGIFRPK 390
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +SD+ R+L +E F L G P+RI +S
Sbjct: 391 LRYAHQGGMNPPIVVIHGNALDAISDSYRRYLESRFREAFKLEGTPLRIEFKS 443
>gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1]
gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237812544|ref|YP_002896995.1| GTP-binding protein EngA [Burkholderia pseudomallei MSHR346]
gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344]
gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b]
gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1]
gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346]
gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
Length = 460
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 235/473 (49%), Gaps = 49/473 (10%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+
Sbjct: 15 QMKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDT 72
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G E A G IL A T + + +F++D R+GL P D + +LRK +P
Sbjct: 73 GGFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RP 128
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
I + +NK E + A++ LG GDP AISA G G+ ++
Sbjct: 129 IFLVVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVNDM------------- 170
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+N++ + + E+ + +++AIVGRPNVGKSTL+N L+ EDRV+
Sbjct: 171 --INEAL--EVAYAGEPQESEEAAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMP 226
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 227 GTTRDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDA 286
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ + VE+GR LVV VNK D L V+E ++ + +
Sbjct: 287 RQDISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLE 338
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPK 524
F SA E G A+M V D Y +LPT +L R L V + + +PK
Sbjct: 339 FAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPK 398
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 399 LRYAHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 451
>gi|428221421|ref|YP_007105591.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
gi|427994761|gb|AFY73456.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
Length = 460
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 241/475 (50%), Gaps = 55/475 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V ++GRPNVGKSAL NRL A+VY+ P +TRD A F ++D+ G
Sbjct: 3 LPIVAVVGRPNVGKSALVNRLTGENYAIVYDQP--GITRDRTYRPAFWNGHDFTIVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L A L + ++ IF++D +G+ D ++ +WLR+ + + ++
Sbjct: 61 L-VFADDTEFLPMIRQQAFVAIEQSCAVIFVVDGMTGITAADWQIAQWLREQS--VPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES++ G AAE LG G+PIA+S+ G G EL +AL + D
Sbjct: 118 AVNKCESMNLGMAQ----AAEFWQLGLGEPIALSSLHGNGTGELLDALVQHLPD------ 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D PE DE +++AI+GRPNVGKS+LLNA E+R +V P AG T
Sbjct: 168 -----------PDTVEPESDE----IKVAIIGRPNVGKSSLLNAFTGEERCIVSPIAGTT 212
Query: 360 RDSVRV----HFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVL 413
RD++ + + R L+DTAG ++R++ E G S+ ++ K + R+ VV LV+
Sbjct: 213 RDAIDMIVSRTVNGEERNYRLIDTAG-IRRKRGVEYGAEFFSINRAFKAISRSDVVLLVI 271
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R +EG+ V+++NK D + + + +Y +++Q+ +
Sbjct: 272 DAIDGVTDQDQKLAGRINDEGKACVLVINKWDAVE-KDSYTIYDYT-----EQVQSRMMF 325
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSA 521
V PV+F SAL G+ ++ QV ++ R+PT+ LN L + + HS Q
Sbjct: 326 VDYAPVIFVSALTGQRVPKILDQVDIVAEQHRRRVPTAVLNEVLTEAVSWHSPPTTRQGK 385
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q +I Y TQV A PP + F + K +D+ R++ + G P+R+ R
Sbjct: 386 QGRIYYGTQVSASPPAIILFCNDPKRFNDSYRRYVENQFRTSLGFTGTPLRLIWR 440
>gi|434403314|ref|YP_007146199.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
gi|428257569|gb|AFZ23519.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
Length = 454
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 237/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD + D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYMPSFWNDREFMVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A LA+ AIF++D ++G P D E+ WLR+ + + +
Sbjct: 61 LVFNDDTEFLPLIRQQALIA--LAEACAAIFVVDGQTGPTPADEEIAGWLRQQS--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G A AA+ LG G+P ISA G G EL + L
Sbjct: 117 LAVNKCESPDQG----AMQAADFWGLGLGEPFPISAIHGSGTGELLDEL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q + + ED+ +++AI+GRPNVGKS+LLN + E+R +V P +G
Sbjct: 162 -----------VQHIPAVEDEPETNVIKVAIIGRPNVGKSSLLNVFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+T L+DTAG +++ E G S+ ++ K + RA VV LVLDA++
Sbjct: 211 TRDAIDTVVERNGQTYRLIDTAGIRKKKHIEYGTEFFSINRAFKAIRRADVVLLVLDAQD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR +++VNK D + + + +Y K +Q +
Sbjct: 271 GATEQDQKLAGRILEEGRACIIVVNKWDTVE-KDSYTIYDYEK-----ALQERLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
+F SAL G+ V+ V + R+ TS +N L + HS Q KI
Sbjct: 325 DTIFVSALTGQRVEKVLELVNQAAEAHKRRVSTSVINEVLTDAVSWHSPPASRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV ++PPT F++ K ++ R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVTSQPPTIALFVNEAKRFNENYRRYIERQFRQQLGFKGTPIRLLWRS 436
>gi|374853981|dbj|BAL56875.1| small GTP-binding protein [uncultured Chloroflexi bacterium]
Length = 457
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 246/486 (50%), Gaps = 68/486 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNR + R A+V TP TRD G + F V+D+ G+
Sbjct: 6 PLVALVGRPNVGKSTLFNRFVGERLAIVDETPG--TTRDRIFGSCEWNGQIFDVVDTGGI 63
Query: 181 ETE--------ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH- 231
+ + S ++ + +F+ D + G P D E+ + LR+H
Sbjct: 64 DPQHGGRSPLSTGSAEFIEEIRRQALLGVENADIVLFLTDGQEGPTPADHEIARLLRRHQ 123
Query: 232 ----APQIKP--IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE 285
A ++ P ++ +NKCES + A+A LG G+P AISA G G +L +
Sbjct: 124 KKTAAGKLSPPILLVVNKCES-----EAQRAASAAFYELGLGEPHAISALHGTGTGDLLD 178
Query: 286 ---ALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
L P +E+ S E+D K+ AIVG+PNVGKS+LLN
Sbjct: 179 RIVELLPRIEE---------------------SEEEDSVKI----AIVGKPNVGKSSLLN 213
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
LL E+RV+V P G TRD++ H EYQG + L+DTAG +R + E G + SV++S +
Sbjct: 214 RLLGEERVIVSPIPGTTRDAIDTHLEYQGVPITLIDTAGIRRRGRIEPGVETYSVLRSLQ 273
Query: 402 NLMRAHVVALVLDAEE-VRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ RA VV LV+DA + A +E + VV+VNK D + +++S ++ K+
Sbjct: 274 AIDRADVVLLVIDATSGITAQDAHIAGFILEAWKSCVVVVNKWDAI--QKDSQTMEKWKQ 331
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
+ QE+ + +P +F SA G+ ++ + ++ R+PTSRLN+ L+K
Sbjct: 332 QIRQELNF----MDYVPALFVSARTGQRVDQILPTALKVQEERLARIPTSRLNQLLQKAQ 387
Query: 512 GRHSWKDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
R + Q KI Y TQV+A PPTF+ +++ + +R+L ++ ++ G P
Sbjct: 388 DRQPPPAHAGRQLKIFYATQVRAAPPTFLIYVNEPSLMHFTYMRYLENCIRAEYPFTGTP 447
Query: 571 IRITQR 576
IR+ +
Sbjct: 448 IRLVTK 453
>gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243]
gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229]
gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668]
gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247]
gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a]
gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344]
gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b]
gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98]
gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14]
gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91]
gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9]
gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210]
gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177]
gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112]
gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215]
gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|81824774|sp|Q63US9.1|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224313|sp|A3MK70.1|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224314|sp|A2S2A6.1|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224315|sp|A3NVW6.1|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224316|sp|A3NA49.1|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243]
gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229]
gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668]
gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a]
gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247]
gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
Length = 445
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 234/470 (49%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + A++ LG GDP AISA G G+ ++ +
Sbjct: 117 VVNKAEGM-----KYTAVASDFYELGLGDPRAISAAHGDGVNDM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + E+ + +++AIVGRPNVGKSTL+N L+ EDRV+ G T
Sbjct: 157 NEAL--EVAYAGEPQESEEAAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 275 ISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLEFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G A+M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|270308559|ref|YP_003330617.1| GTP-binding protein [Dehalococcoides sp. VS]
gi|270154451|gb|ACZ62289.1| GTP-binding protein [Dehalococcoides sp. VS]
Length = 441
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 241/482 (50%), Gaps = 60/482 (12%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
N P + I+GR NVGKS L NRL + A+ + P TRD D + ++D+
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLP--GTTRDRLFTTVSWLDRKLIMVDT 60
Query: 178 AGLETEATSGSILDRTAGMTANV-----LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA 232
GL+ + ++ G N+ + + + ++DV++GL D E+ +R+
Sbjct: 61 GGLDPD------IESVIGQQVNIQISLAIKEADLVLLVVDVKTGLVTSDYEMADIIRRTG 114
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
+ I+ NK ++L G AAE LGFG+P ISA G G+++L
Sbjct: 115 KSV--ILVANKADNLKMGQD-----AAEFYSLGFGEPSVISAFHGNGISDLM-------- 159
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D +L L D Q + SPE+D S ++LA+VGR NVGKSTLLN L ++R +V
Sbjct: 160 DRVLEELPD---------QPIASPEEDNS---VKLALVGRANVGKSTLLNTFLGQERSIV 207
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
G TRD++ ++ G V L+DTAG +R K E G SV+++ K + RA VV L
Sbjct: 208 SNIPGTTRDAIDTPLDFNGTNVLLIDTAGIRRRGKVESGVEKYSVLRALKAVDRADVVLL 267
Query: 412 VLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V+D EE+ ++ +G+++I+NK DL G+ K V Q IQ+
Sbjct: 268 VMDTEELVTAQDTHIAGYVRDTAKGIIIILNKWDLGKGQD--------KAEVTQTIQSRF 319
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS- 520
+ P++F S GR ++ + ++ R+PT+++N + + + H+ Q
Sbjct: 320 KFLDYAPILFVSGKTGRDVDTIIPMALKVQEERSKRIPTAKVNSVVTEALSAHTPPRQGK 379
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
Q KI Y TQ + PP+FV F++ K + + RF+ L+E F G PIR+T ++
Sbjct: 380 TQLKIFYATQAEINPPSFVFFVNNPKLVHFSYERFIENRLRESFGFFGTPIRLTFKARGE 439
Query: 581 KC 582
KC
Sbjct: 440 KC 441
>gi|333979257|ref|YP_004517202.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822738|gb|AEG15401.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
Length = 437
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 246/472 (52%), Gaps = 57/472 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL+ R A+V + P +TRD A+ F ++D+ GL
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGSRIAIVEDEP--GITRDRLYQDAEWAGRVFTLVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ SG I + + + +F++D R+GL D +V LR+ KP++
Sbjct: 62 DF-VESGDIPRQVRRQVELAIEEADVVLFLVDARAGLTSTDEDVAALLRRTK---KPVLL 117
Query: 241 M-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+ NK E+ TG L + LG G+PI ISA G+ +L + L
Sbjct: 118 VANKVENFQR-TGQLV----DFYRLGLGEPIPISAAQGMNTGDLLDRL------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
V P+ E + P +++A++GRPNVGKS+L+NA+L E RV+V G
Sbjct: 161 -----------VSVLPPDAAEEEEPDTIRIAVIGRPNVGKSSLVNAILGEQRVIVSEIPG 209
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ +FE +GR LVDTAG ++ + E+ SV++S + + R V +VLDA
Sbjct: 210 TTRDAIDTYFEREGRRYMLVDTAGIRRKSRIEEAVERYSVIRSLRAVDRCEVALVVLDAL 269
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E A E+G+ V++VNK DL+ +++ +R E + +E+ +T
Sbjct: 270 EGVTDQDKRIAGYAHEQGKASVLVVNKWDLVE--KDNRTTQRFTELIRRELAF----MTY 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPK 524
P VF SAL G+ R+ + +++D Q+ CLR+ TS LNR +R VM D++ + K
Sbjct: 324 APAVFISALTGK-RVPRLLEMVDLVAQQQCLRISTSDLNRLIRDAVMHNPPPADKNRRLK 382
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQ +PPTF+ F++ + + + LR+L L+ F G PIR R
Sbjct: 383 ILYATQGGVKPPTFILFVNDPELMHFSYLRYLENQLRAAFGFEGTPIRFLLR 434
>gi|95930679|ref|ZP_01313413.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM
684]
gi|95133331|gb|EAT14996.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM
684]
Length = 436
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 240/470 (51%), Gaps = 51/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS LFNR++ R+A+V + P VTRD D F ++D+ G
Sbjct: 1 MSVVAIVGRPNVGKSTLFNRILGERKAIVEDYPG--VTRDRNYADVTRYDKPFTLIDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + +L + + + + +F++D R GL P D EV + LR+ KP++
Sbjct: 59 FEP-VSEVRMLVQMREQSQLAIEEADVILFVMDGRDGLTPSDEEVAEMLRRVD---KPVL 114
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK + AAE LG SAE G GM EL M +
Sbjct: 115 FVVNKVDG-----DKQEEQAAEFYSLGIEHFFVTSAEHGRGMGEL-----------MAAI 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L++ +V + EDD +++ +LA++GRPNVGKS+L+N LL +RV+ P AG
Sbjct: 159 LDE--------LPEVKTVEDDSAEV--RLAVIGRPNVGKSSLVNKLLGYERVVANPTAGT 208
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDSV F Y + L+DTAG ++ K + SV+Q+ K + RAHVV +V+DAEE
Sbjct: 209 TRDSVDTPFTYNNQRYVLIDTAGIRRKGKVSQKLEKYSVVQALKGMDRAHVVMVVIDAEE 268
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A + GR +V++VNK D L+ + N + K E++ ++
Sbjct: 269 GITEQDLTIAGYAYDRGRAVVLVVNKWDTLT-KDNQTMKK-----FTDEVRGQFKFLSFA 322
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
P++F SAL G+ +M V D Q++ ++ T+ LNR L++ H + K+
Sbjct: 323 PIMFVSALTGQRVAKIMETVEDVAQQFNRKISTAELNRVLKQAEEAHPPAMYHGKRVKLF 382
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ RPP+F F++ +K + + R+L +++ F G PIRIT R
Sbjct: 383 YITQTAVRPPSFTIFVNKEKGVHFSYRRYLANKIRQPFGFSGCPIRITYR 432
>gi|78184221|ref|YP_376656.1| GTP-binding protein EngA [Synechococcus sp. CC9902]
gi|123581907|sp|Q3AZ65.1|DER_SYNS9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78168515|gb|ABB25612.1| Small GTP-binding protein domain [Synechococcus sp. CC9902]
Length = 455
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 235/474 (49%), Gaps = 59/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + GL D + ++LR+ + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALDEASVALVIVDGKQGLTAADESIAEFLRQQ--RCPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES+ G AAE LG G+P ISA G G E V D +L L
Sbjct: 119 VNKCESVEQGLA----MAAEFWSLGLGEPYPISAIHGAGTAE--------VLDQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D E + P+Q++I+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDQEGDEEEPIQMSIIGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTM------SATEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVESIFALAALAVEQHRRRVTTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K+ Y TQV +RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 GKLYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERHIREGLGFDGTPLKLFWR 436
>gi|404378735|ref|ZP_10983820.1| GTPase Der [Simonsiella muelleri ATCC 29453]
gi|404294960|gb|EFG31543.2| GTPase Der [Simonsiella muelleri ATCC 29453]
Length = 501
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 241/470 (51%), Gaps = 53/470 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
I + PT+ ++GRPNVGKS LFNRL + ++ALV++ P +TRD G ++G + V+D
Sbjct: 11 IIMKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPG--LTRDRHYGHGRVGSKPYLVVD 68
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E SG IL A T + + IF++D R+GL P D + LR+ + +
Sbjct: 69 TGGFEPVVDSG-ILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSS---R 124
Query: 237 PI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P+ +A+NK E G+ AAE L G+P IS G G+ L E + D
Sbjct: 125 PVFLAVNKGEG-----GNRPILAAEFYELALGEPYVISGAHGDGVYYLIEDVLEKFPD-- 177
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
TS E E+K P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 178 ------------------TSDEQPENKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDM 218
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLD
Sbjct: 219 AGTTRDSIHIDFEREGKPFTIIDTAGVRKRGKVDEAVEKFSVIKAMQAIEAANVAVLVLD 278
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A++ A+E GR LV+ VNK D +S + + + ++I + +
Sbjct: 279 AQQDIADQDATIAGFALEAGRALVIAVNKWDGISEER--------RNDIKRDIARKLYFL 330
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQP 523
+ SAL+ +G + + Y +++PT ++ R L+ + R +P
Sbjct: 331 DFAKFHYISALKEKGIDGLFDSIQAAYDAAFIKMPTPKITRVLQSAIERQQPPRAGLMRP 390
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + + D+ R+LT++ ++ F+L G P+RI
Sbjct: 391 KMRYAHQGGMNPPVIVIHGNSLHAIGDSYTRYLTQTFRKAFNLQGTPLRI 440
>gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
Length = 445
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 234/470 (49%), Gaps = 49/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E A G IL A T + + +F++D R+GL P D + +LRK +PI +
Sbjct: 61 EPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK E + A++ LG GDP AISA G G+ ++ +
Sbjct: 117 VVNKAEGM-----KYTAVASDFYELGLGDPRAISATHGDGVNDM---------------I 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N++ + + E+ + +++AIVGRPNVGKSTL+N L+ EDRV+ G T
Sbjct: 157 NEAL--EVAYAGEPQESEEAAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA +
Sbjct: 215 RDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQD 274
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ VE+GR LVV VNK D L V+E ++ + +
Sbjct: 275 ISDQDAHIAGFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLEFAK 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKY 527
F SA E G A+M V D Y +LPT +L R L V + + +PK++Y
Sbjct: 327 FHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 387 AHQGGQNPPIIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 436
>gi|427730612|ref|YP_007076849.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
gi|427366531|gb|AFY49252.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
Length = 453
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 239/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A GD F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYMPAYWGDREFLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L + AIF+++ ++G + D E+ +WLR+ + +
Sbjct: 61 LVFNDDTEFLPLIRQQALAA--LTEASAAIFVVNGQTGPNSADEEIAEWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P ISA G G EL
Sbjct: 117 LAVNKCESPEQGLIQ----AAEFWELGLGEPYPISAIHGNGTGEL--------------- 157
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L++ T + T+ PE +E +++AIVGRPNVGKS+LLNA + E+RV+V P +G
Sbjct: 158 LDELITHIPAVTE---VPESNE----IKIAIVGRPNVGKSSLLNAFVGEERVIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+ L+DTAG +++ E GP S+ ++ K + RA VV LVLDA +
Sbjct: 211 TRDAIDTFLERDGQAYRLIDTAGIRKKKNVEYGPEFFSINRAFKAIRRADVVLLVLDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR +++VNK D + + + +Y K ++ +
Sbjct: 271 GVTEQDQKLAGRIIEEGRACIIVVNKWDAVE-KDSYTIYDYEK-----NLEARLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+F SAL G+ ++ V + R+ TS +N L + HS Q +I
Sbjct: 325 DTIFVSALTGQRVEKILELVNQAAVEHKRRVSTSVINEVLEDAVKWHSPPTSRGGKQGRI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV +PPT F++ K +D R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVTTQPPTIALFVNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRS 436
>gi|116071134|ref|ZP_01468403.1| GTP-binding protein EngA [Synechococcus sp. BL107]
gi|116066539|gb|EAU72296.1| GTP-binding protein EngA [Synechococcus sp. BL107]
Length = 455
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 235/474 (49%), Gaps = 59/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + GL D + ++LR+ + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALDEASVALVIVDGKQGLTAADESIAEFLRQQ--RCPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES+ G AAE LG G+P ISA G G E V D +L L
Sbjct: 119 VNKCESVEQGLA----MAAEFWSLGLGEPYPISAIHGAGTAE--------VLDKVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D E + P+Q++I+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDQEGDEEEPIQMSIIGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTM------SATEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVESIFALAALAVEQHRRRVTTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K+ Y TQV +RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 GKLYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERHIREGLGFDGTPLKLFWR 436
>gi|238021706|ref|ZP_04602132.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
gi|237866320|gb|EEP67362.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
Length = 489
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 240/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G AAE L G+P IS G G+ L E + + D
Sbjct: 115 YLAVNKGEG-----GRRDVLAAEFYELALGEPHVISGAHGDGVYYLIEEILENFPD---- 165
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D T PE+ K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 166 -------------ADETQPEN---KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A++ LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAIEAANIAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LV+ VNK D +S + + + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVIAVNKWDGISEER--------RNDIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ SAL+ RG + + Y + +PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHYISALKERGIDGLFDSIQAAYNAAFINMPTPKITRVLQSAVERQAPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNSLGAISDSYTRYLTQTFRKAFNLQGTPLRI 428
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 27/142 (19%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYN---TPDDHVTRDI-REGLAKLGDLRFK 173
N P +IGRPNVGKS L N ++ + ++ T D + D REG F
Sbjct: 173 NKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKP------FT 226
Query: 174 VLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLD-------LEVG 225
++D+AG+ +++ + + A + A+ ++D + + D LE G
Sbjct: 227 IIDTAGVRRRGKVDEAVEKFSVIKAMQAIEAANIAVLVLDAQQDIADQDATIAGFALEAG 286
Query: 226 KWLRKHAPQIKPIVAMNKCESL 247
+ L ++A+NK + +
Sbjct: 287 RAL---------VIAVNKWDGI 299
>gi|428771278|ref|YP_007163068.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
gi|428685557|gb|AFZ55024.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
Length = 453
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 249/503 (49%), Gaps = 76/503 (15%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V IIGRPNVGKSAL NRL ++A+V++ P VTRD A D F+V+D+
Sbjct: 1 MLPIVAIIGRPNVGKSALVNRLCGEQDAIVFDQP--GVTRDRTYRRAFWQDREFQVVDTG 58
Query: 179 GL----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQ 234
GL ETE L L+++ AIF++D + GL D E+ WLR
Sbjct: 59 GLVFDDETE-----FLPLIREQAEAALSESVVAIFVVDGKLGLTAGDEEIASWLRSQP-- 111
Query: 235 IKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
+ ++A+NKCES G AAE LG G+P ISA G G +L E +
Sbjct: 112 VPVVLAVNKCESETQGLT----LAAEFWNLGLGEPFPISAIHGNGTGDLLEKV------- 160
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
T+ V S ++ E ++AIVGRPNVGKS+LLNAL E R +V P
Sbjct: 161 ---------------TEYVPSMDEWEEVEETKVAIVGRPNVGKSSLLNALTGEKRAIVSP 205
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALV 412
+G TRD++ + E G+T L+DTAG ++R+K + G S+ ++ K + RA VV V
Sbjct: 206 ISGTTRDAIDMVVERDGKTYRLIDTAG-IRRKKNVDYGTEFFSINRAFKAIKRADVVLFV 264
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+D + R ++EG+ V++VNK D + + +Y E Q +I
Sbjct: 265 IDVLDGVTEQDLKLAGRIIDEGKAAVIVVNKWDAVE-KDTHTIY---------EYQKIIG 314
Query: 463 Q----VTGIPVVFTSALEGRGRIAVMHQVIDT----YQKWCLRLPTSRLNRWLRKVMGRH 514
+ VFTSA+ G+ R+ + +IDT +QK R+ TS +N + + H
Sbjct: 315 DRLYFMEWADRVFTSAMTGK-RVDKILDLIDTAAEGHQK---RVSTSVINEVIEDAVRWH 370
Query: 515 S--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
S Q Q KI Y TQV ++PPT F++ K +D+ R++ K ++ G P++
Sbjct: 371 SPPTSRQGKQGKIYYGTQVTSKPPTIALFVNDPKRFNDSYRRYMEKQFRQQLGFHGTPLK 430
Query: 573 ITQRSVPRKCGSSSSRQNTGQKV 595
+ R + G N KV
Sbjct: 431 LLWRGKSLREGEKMGSSNRATKV 453
>gi|186682120|ref|YP_001865316.1| GTP-binding protein EngA [Nostoc punctiforme PCC 73102]
gi|238691263|sp|B2J1L2.1|DER_NOSP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|186464572|gb|ACC80373.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 456
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 239/475 (50%), Gaps = 58/475 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYMPAFWNGREFLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R MTA LA+ AIF++D ++G D E+ +W+R+ ++ +
Sbjct: 61 LVFNDDTEFLPLIRQQAMTA--LAEACAAIFVVDGQTGPTSADQEIAEWMRQQ--RVPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR---PSVEDYM 295
+A+NKCES G AAE LG G+P ISA G G EL + L P+VED
Sbjct: 117 LAVNKCESPDQGLMQ----AAEFWELGLGEPYPISAIHGSGTGELLDELVNHIPAVEDI- 171
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
PE +E +++AIVGRPNVGKS+LLNA + E+R +V P
Sbjct: 172 --------------------PETNE----IKVAIVGRPNVGKSSLLNAFVGEERAIVSPI 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ E G+T L+DTAG +++ E G S+ ++ K + RA VV LVLD
Sbjct: 208 SGTTRDAIDTVIERDGQTYRLIDTAGIRKKKHIEYGTEFFSINRAFKAIRRADVVLLVLD 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R +EEGR +++VNK D + + + +Y K +Q+ +
Sbjct: 268 AVDGVTEQDQKLAGRIIEEGRACIIVVNKWDAVE-KDSYTIYDYEK-----TLQSRLHFT 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--Q 522
+F SAL G+ ++ V + R+ TS +N L + HS Q
Sbjct: 322 EWAETIFVSALSGQRVEKILELVKTAAESHKRRVSTSVINEVLTDAVSWHSPPASRGGRQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI Y TQV ++PPT F++ K +D R++ + ++ G PI + RS
Sbjct: 382 GKIYYGTQVSSQPPTIALFVNDSKRFNDNYRRYIERQFRQQLGFKGTPIILLWRS 436
>gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
Length = 465
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 242/472 (51%), Gaps = 52/472 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT++++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGRGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE A G I+ A T + + +F++D R GL P D + LRK +P+
Sbjct: 59 GLEPVAKEG-IMHEMAKQTRQAVDEADLVLFIVDGRDGLTPQDRIIATQLRKTG---RPV 114
Query: 239 VAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ + NK E + A+ LG G+PI IS+ G + E+ E
Sbjct: 115 MLLVNKAEGMRRER-----VTADFHELGLGEPIPISSAHGDNVAEMIEV----------- 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
L++ + + P +LAIVGRPNVGKSTL+NA+L E+RV+ + G
Sbjct: 159 ALDELPAAEVEAEEKSDHP---------KLAIVGRPNVGKSTLVNAILGEERVIAFDQPG 209
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE GR ++DTAG +R K ++ SV+++ + + A+VV LV+DA
Sbjct: 210 TTRDSIYIDFERAGRQYTIIDTAGIRRRGKIDEAIEKFSVVKTLQAIEDANVVVLVVDAR 269
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ ++ GR LV+ VNK D L YKR + V ++I+ + ++
Sbjct: 270 DQITEQDAHLADFVLQAGRALVLAVNKWDGLDE------YKR--DTVKRDIERKLHFLSF 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL G G A++ V Y ++PT +L R L + + + + S +PK+
Sbjct: 322 AKHHFISALNGTGVDALLKSVNQAYTAAMTKMPTPQLTRVLEEALQKQQPPRVGSFRPKM 381
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q + PP + S + D+ R+L K+ + F L G P+RI +S
Sbjct: 382 RYAHQGGSNPPLIIIHGSALDKIPDSYTRYLEKTFCDAFKLQGTPLRIEFKS 433
>gi|412987790|emb|CCO19186.1| GTP-binding protein EngA [Bathycoccus prasinos]
Length = 816
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 255/539 (47%), Gaps = 78/539 (14%)
Query: 95 GVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDD 154
GV ED + D+ I LLP V ++GRPNVGKSALFNRL + A+V++ P
Sbjct: 290 GVPEDDQKTRRRRTRRDWGTIPQELLPKVAVVGRPNVGKSALFNRLTGTKRAIVFDEP-- 347
Query: 155 HVTRDIREGLAKLGDLRFKVLDSAGLET---EATSGSILDRTAGM----------TANVL 201
VTRD A GD F ++D+ GLE + + +DR G+ A +
Sbjct: 348 GVTRDRMYVRAFWGDHEFMLVDTGGLENLPGDPNAAPSIDRIGGVEILPGMIEAQAAEAV 407
Query: 202 AKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAES 261
+ IF+ D +SGL D E+ +WLRKH I +A+NKCES G E
Sbjct: 408 READVLIFVTDGQSGLTAADKEIFRWLRKHHADIPVHLAVNKCESSTRG---------EE 458
Query: 262 LMLGFGD-------PIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVT 314
++L F PI +SA +G G EL +A+ S L + T +
Sbjct: 459 MVLDFWQLSSKSVAPIGVSAISGTGTGELLDAVCES--------LPEPPTMEEQISIAEE 510
Query: 315 SPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVR---VHFEYQG 371
+ E ++ +LP+Q+AIVGRPNVGKS+LLN L R +V +G TRD++ V +
Sbjct: 511 NKEKEDKELPIQVAIVGRPNVGKSSLLNGLAGTPRSIVSDFSGTTRDTIDTDVVDKNHPD 570
Query: 372 RTVYLVDTAGWLQR-------------EKEKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
R L+DTAG +R EK+ G S+ ++ + + RA VV LV+DA E
Sbjct: 571 REFTLIDTAGIRRRTQIKRDSKSIKGEEKKFGLEQQSIGRALQAMKRADVVVLVIDATEG 630
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
RAV+EG LV+ NK DL+ + + ++++ +
Sbjct: 631 ATQQDFVLAERAVQEGCALVLCCNKWDLVDKDTYTM------NSYTDDLRSKLRVFEWAS 684
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP----K 524
+++TSAL G+ ++ + RL T+ LN +++ WK A+ +
Sbjct: 685 IIYTSALTGQRITKILDASYEASVIHKKRLTTATLNAVVQEAT---LWKAPPAKANKKGR 741
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
I Y TQ RPPTFV F + K SD RF+ + L+++ G PIR+ R + G
Sbjct: 742 IYYTTQAAIRPPTFVFFCNDPKLFSDTYKRFMERQLRKNIGFDGTPIRLLWRGKSKGGG 800
>gi|406879439|gb|EKD28046.1| hypothetical protein ACD_79C00455G0002, partial [uncultured
bacterium]
Length = 430
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 249/466 (53%), Gaps = 54/466 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSA 178
L V+I GRPNVGKS LFNRL+ +R+A+V + +TRD I ++K G F ++D+
Sbjct: 6 LFKVVIAGRPNVGKSTLFNRLLGKRQAIVDSVAG--ITRDRIYARISKHGKT-FYIVDTG 62
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E TS + + L + +F++D+++G+HP+D ++ K L+K +I I
Sbjct: 63 GY-FEGTSNVLEEALLEQFNEALYEADLIVFVMDIQTGIHPMDKQILKNLKKLQKEI--I 119
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK ++ L A E + +G G +SA+ G+ EL E ++R
Sbjct: 120 YVVNKVDN-----TVLEADAFEFMKMGIGTYFPVSAQHNKGIVEL--------EKEIVRK 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ D +PE+++ P ++ IVG+PNVGKS+L+N LL +R +V + G
Sbjct: 167 IPDG-----------DNPENEK---PFRITIVGKPNVGKSSLVNKLLGTNRSIVHDKPGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPA-SLSVMQSRKNLMRAHVVALVLDAE- 416
TRD++ V FE++G+ L+DTAG +R K K P S S++++++ + + +V ++ DAE
Sbjct: 213 TRDAIEVDFEFEGKPYTLIDTAGLTRRSKVKEPVDSFSIIRAKEAIESSDLVIIMFDAER 272
Query: 417 -----EVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++R ++ G+G ++I+NK DLL G + +E +EI + V I
Sbjct: 273 HVENQDMRITRMIIDAGKGCMIIINKWDLLPGFR--------QEHYKKEIYDNLKFVNFI 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIK 526
P++FTS L + +M + R+PTS+LN ++K +++ + + KI
Sbjct: 325 PIMFTSVLRNKNMDKIMKMISRLRTTAFKRIPTSKLNEAIKKAYDKNTPPYVKGKRLKIY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
Y TQ+ P TF F++ + D+ L++L ++E F G+PIR
Sbjct: 385 YTTQITNIPATFALFVNSSICMIDSYLKYLENQIREAFTFEGMPIR 430
>gi|134094495|ref|YP_001099570.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
gi|166198721|sp|A4G4K6.1|DER_HERAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|133738398|emb|CAL61443.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
Length = 447
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 237/469 (50%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRMGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T +A+ IF++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG GDP ISA G G+++L VE+ +
Sbjct: 118 VNKAEGM-----KYTMVTADFYELGLGDPYVISAAHGDGVSDL-------VEESL----- 160
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D ++V +D ++LAIVGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 161 DIAFAQRPPEEEVPESKDRS----IRLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE +G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DSIEIPFEREGKLYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L+ + ++ + +++ + ++
Sbjct: 277 SEQDAHIAGFILESGRALVVGVNKWDGLTSDR--------RDEIKIDLERKLGFLSFAKT 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYF 528
F SAL+ G +M V + Y L T +L R L V + + S +PK++Y
Sbjct: 329 HFVSALKSSGIGPMMKSVDNAYAAAMSNLSTPKLTRALIEAVEHQQPRRKGSIRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + RFL K +E F L G P+RI RS
Sbjct: 389 HQGGMNPPIVVIHGNALDAIDANYKRFLEKHFRETFSLVGTPLRIELRS 437
>gi|345875075|ref|ZP_08826871.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
gi|417958224|ref|ZP_12601140.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
gi|343967286|gb|EGV35535.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
gi|343969502|gb|EGV37714.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
Length = 495
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 242/473 (51%), Gaps = 53/473 (11%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
K + + PT+ ++GRPNVGKS LFNRL + ++ALV + P +TRD G ++G +
Sbjct: 6 KKSVFMKPTIALVGRPNVGKSTLFNRLTKTKDALVADLPG--LTRDRHYGHGRVGSKPYL 63
Query: 174 VLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAP 233
V+D+ G E SG IL A T + + +F++D R+GL P D + LR+ +
Sbjct: 64 VVDTGGFEPVVDSG-ILHEMAKHTLQAIDEADAVVFLVDCRTGLTPQDKIIADRLRQSS- 121
Query: 234 QIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
+P+ +A+NK E ++ S AE L GDP IS G G+ L E
Sbjct: 122 --RPVFLAVNKGEGANHAVLS-----AEFYELALGDPYVISGAHGDGVYYLIE------- 167
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + + ED++ + P+ A++GRPNVGKSTL+NA+L E+RV+
Sbjct: 168 --------DVLAHFPEAVE-----EDEQPRHPV-FAVIGRPNVGKSTLVNAILGEERVIA 213
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
AG TRDS+ + FE G+ ++DTAG +R K ++ SV+++ + + A+V L
Sbjct: 214 FDMAGTTRDSIHIDFERDGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAIEAANVAVL 273
Query: 412 VLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
VLDA++ A+E GR LVV VNK D + + K + ++I +
Sbjct: 274 VLDAQQDIADQDATIAGFALEAGRALVVAVNKWDNIDEDR--------KNQIKRDIARKL 325
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQS 520
+ + SAL+ RG + + Y +++PT ++ R L+ + R +
Sbjct: 326 YFLDFAKFHYISALKERGIEGLFDSIQAAYDAAMIKMPTPKITRVLQSAVERQQPARAGL 385
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+PK++Y Q PP V + + +SDA R+LT++ ++ F+L G P+RI
Sbjct: 386 VRPKMRYAHQGGMNPPVIVVHGNSLQHISDAYTRYLTQTFRKAFNLQGTPLRI 438
>gi|325265768|ref|ZP_08132455.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
gi|324982751|gb|EGC18376.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
Length = 489
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 240/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMARQTLQAIDEADAVIFLVDARTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G AAE L G+P IS G G+ L E
Sbjct: 115 YLAVNKGEG-----GRRDVLAAEFYELALGEPHVISGAHGDGVYYLME------------ 157
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+N ++ E E+K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 158 ----EVLENFPEAEE----EQPENKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LV+ VNK D +S + + + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVIAVNKWDGISEER--------RNDIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHYISALKERGIDGLFDSIQAAYDAAFIKMPTPKITRVLQSAIERQAPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + +SD+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNSLSAISDSYTRYLTQTFRKAFNLQGTPLRI 428
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 27/142 (19%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYN---TPDDHVTRDI-REGLAKLGDLRFK 173
N P +IGRPNVGKS L N ++ + ++ T D + D REG F
Sbjct: 173 NKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKP------FT 226
Query: 174 VLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLD-------LEVG 225
++D+AG+ +++ + + A + A+ ++D + + D LE G
Sbjct: 227 IIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAG 286
Query: 226 KWLRKHAPQIKPIVAMNKCESL 247
+ L ++A+NK + +
Sbjct: 287 RAL---------VIAVNKWDGI 299
>gi|113474219|ref|YP_720280.1| GTP-binding protein EngA [Trichodesmium erythraeum IMS101]
gi|123161345|sp|Q119L7.1|DER_TRIEI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110165267|gb|ABG49807.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 453
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 238/474 (50%), Gaps = 58/474 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL ++A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPG--ITRDRTYRNAYWEDREFQVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A L + AIF++D ++GL D E+ +WLR+ I +
Sbjct: 61 LVFDDNTEFLPLIREQAMAA--LVEASVAIFVVDGQTGLTGGDEEIAQWLRQQT--IPIL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES+ G AA LG G+P IS G G EL + L +
Sbjct: 117 LAVNKCESITEGLTQ----AAMFWELGLGEPYPISGIHGNGTGELLDDLITYLP------ 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
T+ N + ++AIVGRPNVGKS+LLN+ + E R +V P +G
Sbjct: 167 TQGEITETNQT----------------KIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+T L+DTAG +++ E G + ++ K + RA VV V+DA +
Sbjct: 211 TRDAIDTVVERNGKTYRLIDTAGIRKKKNVEYGAEFFGINRAFKAIRRAEVVMFVIDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +E+GR V++VNK D + + N +Y QE+++ + V
Sbjct: 271 GVTEQDQKLANRIIEDGRACVIVVNKWDAIE-KDNYTIY-----TYEQEVRSRLYFVEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-----QSAQ 522
++F SAL G+ +++ + + ++ R+ TS +N L + + SW Q Q
Sbjct: 325 EMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAI---SWNSPPTNRQGRQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV ++PPT F++ K + R++ ++ G PIR+ R
Sbjct: 382 GKIYYGTQVTSKPPTIALFVNDPKRFPENYRRYIQSQFRQHLGFTGTPIRLLWR 435
>gi|282895428|ref|ZP_06303565.1| GTP-binding protein engA [Raphidiopsis brookii D9]
gi|281199461|gb|EFA74324.1| GTP-binding protein engA [Raphidiopsis brookii D9]
Length = 453
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 239/475 (50%), Gaps = 58/475 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL + A+V++ P VTRD A + F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPG--VTRDRTYRPAFWQNREFLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R +TA L++ AIF++D ++GL P D E+ +WLR+ + +
Sbjct: 61 LVFNDNTEFLPLIRQQAITA--LSEACAAIFVVDGQAGLTPADEEIAEWLRQQT--VPTL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYM 295
+A+NKCES G A+E LG G+P ISA G G +L + L P VED
Sbjct: 117 LAVNKCESPDQGVIQ----ASEFWELGLGEPYPISAIHGSGTGDLLDELIKYTPQVEDL- 171
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
Q NS +++AIVGRPNVGKS+LLNA + E+R +V P
Sbjct: 172 ---------QENSE---------------VKVAIVGRPNVGKSSLLNAFVGEERAIVSPI 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ E +G+ L+DTAG +++ E G S+ ++ K + RA VV LVLD
Sbjct: 208 SGTTRDTIDTLIEREGQAYRLIDTAGIRKKKHVEYGTEFFSINRAFKAIRRADVVLLVLD 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R +E+GR +++VNK D + + + +Y K ++ +
Sbjct: 268 ALDGVTEQDQKLAGRIIEDGRACIIVVNKWDAVE-KDSYTIYDHEK-----SLEARLHFT 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQ 522
+F SA+ G+ ++ V + R+ TS +N L + HS Q
Sbjct: 322 EWADTIFVSAVTGQRVEKILDLVNKAAESHKRRVSTSVVNEVLTDAVSWHSPPASRSGKQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI Y TQV ++PPTF F++ K ++ R++ + ++ G PIRI RS
Sbjct: 382 GKIYYGTQVSSQPPTFALFVNDAKRFNENYRRYIERQFRKQLGFEGTPIRILWRS 436
>gi|325106044|ref|YP_004275698.1| ribosome-associated GTPase EngA [Pedobacter saltans DSM 12145]
gi|324974892|gb|ADY53876.1| ribosome-associated GTPase EngA [Pedobacter saltans DSM 12145]
Length = 433
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 241/480 (50%), Gaps = 79/480 (16%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
V I+GRPNVGKS L+NRL R+A+V DD VTRD GLA+ D F V+D+ G
Sbjct: 5 VAIVGRPNVGKSTLYNRLTETRKAIV----DDMSGVTRDRHYGLAEWTDKTFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
A S I + + VL + A IFM+DV +G+ LD ++ LR+ KP
Sbjct: 61 V--ANSEDIFE--IAIREQVLIAIEEATAIIFMVDVTTGITDLDDDIAGILRRSK---KP 113
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ V NK ++ L AA+ G G+ ++S+ TG G EL D ++
Sbjct: 114 VFVTANKVDN-----NMLLAEAAQFYSFGLGEIYSLSSMTGSGTGELL--------DDVI 160
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ +++ E+ +++LP+ AIVGRPNVGKS+++NALL +DR +V A
Sbjct: 161 KTFDET--------------EEIQNELPV-YAIVGRPNVGKSSMINALLGKDRNIVTNVA 205
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA 415
G TRDS+ +H++ G LVDTAG ++ K + SVM++ L A V+ L+LDA
Sbjct: 206 GTTRDSIHIHYKQFGHDFMLVDTAGLRKKTKVRENIEFYSVMRTIGALEEADVIILMLDA 265
Query: 416 EE---------VRAVEEGR-GLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E E+ R GLV++VNK DL+ +A +A Q+I I T
Sbjct: 266 TEGIESQDINIFHLAEKNRKGLVLVVNKWDLVEKDHKTA------KAFEQKINEKIAPFT 319
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM---------GRHSW 516
+P++FTS E + V+ Y ++ TS+LN +L ++ G+H
Sbjct: 320 DVPIIFTSVTEKQRIFKVLEAAQKVYDNRKKKISTSKLNDFLLPIIENTPPPATKGKHI- 378
Query: 517 KDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KIKY TQ+ A P F F + + + D RFL L+E FD G+PI++ R
Sbjct: 379 -------KIKYITQISASTPMFAFFCNLPQYIKDPYKRFLENKLREQFDFTGVPIQLFFR 431
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
N LP I+GRPNVGKS++ N L+ + +V N TRD K F ++D+
Sbjct: 171 NELPVYAIVGRPNVGKSSMINALLGKDRNIVTNVAG--TTRDSIHIHYKQFGHDFMLVDT 228
Query: 178 AGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEV 224
AGL + ++ + M T L + I M+D G+ D+ +
Sbjct: 229 AGLRKKTKVRENIEFYSVMRTIGALEEADVIILMLDATEGIESQDINI 276
>gi|422321708|ref|ZP_16402753.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
Length = 451
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 237/473 (50%), Gaps = 43/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++G++ F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGEIPFIVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+GL+ D E+ LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G A AE LG G P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGMGAGA-----AIAEFHELGLGQPYPISAAHGDGIVDLIEL---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D + E D ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALQDLAEPPAEEEEPAEEGEHDHR---IKLAIVGRPNVGKSTLINTLMGEERVIAFDMP 217
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 218 GTTRDAIEIDFERDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 277
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +VV VNK D L G + KE + +E + ++
Sbjct: 278 QTEISEQDAHIAGFVLETGRAVVVAVNKWDGLDGEE--------KERIEREFMRKLRFLS 329
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
V SAL G+G ++ V + +L T +L R L+ + + + +PK
Sbjct: 330 FARVHTISALRGQGIKPLLKSVNAAHAAAFAKLSTPKLTRELQAAVEQQPPPRKGIFRPK 389
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 390 MRYAHQGGQNPPLVVIHGNALDAVPDSYRRYLETRFRNAFDLAGTPLRIEFKS 442
>gi|294670887|ref|ZP_06735743.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307374|gb|EFE48617.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 491
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G +LG + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPG--LTRDRHYGHGRLGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQ-SP--RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G AAE L G+P IS G G+ L E + L
Sbjct: 115 YLAVNKGEG-----GRHDVLAAEFYELALGEPHVISGAHGDGVYHLIEKV--------LE 161
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D+ ++N E K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 162 HFPDAKEESN------------EVKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + A+V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LV+ VNK D +S + + + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVIAVNKWDGISEER--------RNDIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
+ SAL+ RG + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHYISALKERGIDGLFDSIQAAYDAAFIKMPTPKITRVLQSAIERQQPARAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + + D+ R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNSLQHIPDSYTRYLTQTFRKAFNLQGTPLRI 428
>gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 492
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 234/469 (49%), Gaps = 61/469 (13%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
+++++GRPNVGKS LFNRL R R+ALV + P +TRD G KLG + V+D+ G E
Sbjct: 4 SIVLVGRPNVGKSTLFNRLTRTRDALVADLPG--LTRDRHYGHGKLGSKPYLVIDTGGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A G I+ A T + + I ++D RSGL LD E+ LRK + +VA+
Sbjct: 62 PLAKDG-IMYHMARQTEQAIDEADVVILVVDGRSGLTALDKEIANRLRKVDRPV--LVAV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRVLN 300
NK E + G ++ LG G+P+AISA G G+ L + AL P
Sbjct: 119 NKSEGMSVGV-----VVSDFHELGLGEPLAISAAHGEGVRALIDLALEP----------- 162
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
C + S PE D K+ AIVGRPNVGKSTL+NALL EDRV+ + G TR
Sbjct: 163 --CAEAVES-----EPESDVVKV----AIVGRPNVGKSTLINALLGEDRVIAFDQPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
D++ V FE G+ L+DTAG +R + EK SV+++ + + A VV LVLDA
Sbjct: 212 DAIEVDFERGGKKYTLIDTAGLRRRGRVFETIEK----FSVIKTLQAVEDAQVVILVLDA 267
Query: 416 EEVRAV----------EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ A E GR LVV VNK D L V+E + ++ + +
Sbjct: 268 RQDIAEQDAHIAAFIRESGRALVVAVNKWD--------GLDSYVREQIKGALEGQLGFID 319
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPK 524
+ SAL G+G + V Y+ LPT +L R L + + R + + +PK
Sbjct: 320 FARFHYVSALRGQGLEPLFRSVDAAYRAAIADLPTPQLTRTLSEAVARQAPPRSGLFRPK 379
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
++Y Q PP V + + ++ R+L + +E F L G P+RI
Sbjct: 380 LRYAHQGGRNPPLIVIHGNALDKVPESYRRYLEHTFREVFKLQGTPLRI 428
>gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
Length = 454
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 240/473 (50%), Gaps = 40/473 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++G++ F +D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGEIPFIAID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+GL+ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGLNAHDHEIAQLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + L A +E LG G P ISA G G+ +L E L
Sbjct: 117 VLLAVNKAEGM-----GLGPAISEFHELGLGQPYPISAAHGDGIVDLIE--------LAL 163
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ L + + + E D ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 164 KDLAEPPAEAEPFEEGEGDLEHDHR---IKLAIVGRPNVGKSTLINTLMGEERVIAFDLP 220
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + F+ GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 221 GTTRDAIEIDFDRDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 280
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E+ +E GR +VV +NK D L G + KE + +E Q + ++
Sbjct: 281 HTEISEQDAHIAGFVLETGRAVVVAINKWDGLDGEE--------KERIEREFQRKLRFLS 332
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
V SAL G+G ++ + + +L T +L R L+ + + + +PK
Sbjct: 333 FARVHTISALRGQGIKPLLKSINSAHAAAFAKLSTPKLTRELQAAIEQQQPPRKGIFRPK 392
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 393 MRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLETRFRNAFDLAGTPLRIEFKS 445
>gi|414591757|tpg|DAA42328.1| TPA: hypothetical protein ZEAMMB73_012049 [Zea mays]
Length = 653
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 272/572 (47%), Gaps = 81/572 (14%)
Query: 62 SLKCNLLPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLP 121
++ + E RG + + H++ D V E K + + +K I NLLP
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHID---DDVRE--KRRNIRDKTSVSKHIPDNLLP 153
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
V IIGRPNVGKSALFNRL+ A+V + P VTRD G + GD F V+D+ G+
Sbjct: 154 KVAIIGRPNVGKSALFNRLVGGNRAIVVDEPG--VTRDRLYGRSYWGDHEFMVIDTGGVI 211
Query: 182 TEATSGS------ILDRTAGMTANVLAKTQFAI----------------------FMIDV 213
T + S + + T GM LA + AI F++D
Sbjct: 212 TLSKSQAGVMEELAVTTTVGMDGIPLATREAAIARMPSMIEKQAVAAVDEASVILFVVDG 271
Query: 214 RSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAIS 273
++GL D+E+ WLR++ ++A+NKCES G A + LGF P+ IS
Sbjct: 272 QAGLVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQ----ALDFWSLGFS-PLPIS 326
Query: 274 AETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRP 333
A TG G +L + + + + + + + E++++K+P +AIVGRP
Sbjct: 327 AITGTGTGDLLDLVCSELRKFEV----------------LDAVEEEKNKVP-AIAIVGRP 369
Query: 334 NVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAGWLQR----EKE 388
NVGKS++LNAL+ EDR +V P +G TRD++ F G L+DTAG +R
Sbjct: 370 NVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDTAGIRRRTAVISAG 429
Query: 389 KGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLS 438
SLSV ++ + + R+ VVALV++A R +EG+ V++VNK D +
Sbjct: 430 STTESLSVKRAFRAIRRSDVVALVIEAMACVTEQDYKIAERIEKEGKACVIVVNKWDTIP 489
Query: 439 GRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 498
+ + + Q+++ + + P+V+ SA G ++ ++ RL
Sbjct: 490 NKNHESTTH-----YEQDVREKLRILDWAPIVYCSATNGTSVEKIISAAALVEKERSRRL 544
Query: 499 PTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFL 556
TS LN+ +R+ + S + ++ Y TQ PPTFV F++ K D R++
Sbjct: 545 STSILNQVIREAIAFKSPPRTRGGKRGRVYYTTQAAVGPPTFVLFVNDAKLFPDTYRRYM 604
Query: 557 TKSLKEDFDLGGIPIRITQRS--VPRKCGSSS 586
K L+ D G PIR+ RS P K G S+
Sbjct: 605 EKKLRSDAGFPGTPIRLLWRSRRRPDKRGKSA 636
>gi|330817163|ref|YP_004360868.1| GTPase family protein [Burkholderia gladioli BSR3]
gi|327369556|gb|AEA60912.1| GTPase family protein [Burkholderia gladioli BSR3]
Length = 448
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 237/472 (50%), Gaps = 49/472 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G + G + V+D+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRAGARPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E A G IL A T + + +F++D R+GL P D + +LRK +PI
Sbjct: 59 GFEPVAKDG-ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPI 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK E + A++ LG GDP AISA G G+T++
Sbjct: 115 FLVVNKAEGM-----KYTAVASDFYELGMGDPRAISAAHGDGVTDM-------------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+N++ + + +D ++ +++AIVGRPNVGKSTL+N L+ EDRV+ G
Sbjct: 156 -INEALEVAYAGQPE--EADDTQASRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPG 212
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA+
Sbjct: 213 TTRDSIYVDFERNGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQ 272
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + VE+GR LVV VNK D L R K + ++++ +
Sbjct: 273 QDISDQDAHIAGFVVEQGRALVVGVNKWDGLDAHTRD----RTKADLTRKLKF----LEF 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
F SA E G ++ V D Y +LPT +L R L V + + +PK+
Sbjct: 325 AKFHFISAAEKTGIGPLLRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKL 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + +++ R+L +E F L G P+RI RS
Sbjct: 385 RYAHQGGQNPPVIVVHGNALDAVTETYKRYLENRFRETFALTGTPLRIEFRS 436
>gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
Length = 470
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 237/468 (50%), Gaps = 50/468 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT++++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADQPG--LTRDRHYGRGRVGERPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE A G I+ A + + + +F++D R+G P DL + LRK KPI
Sbjct: 59 GLEPVAKDG-IMFEMARQSRQAVDEADVVLFLVDGRAGCTPQDLIIATQLRKTG---KPI 114
Query: 239 VAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ + NK E + + A AE LG G+P IS+ G + E+ E ++E++
Sbjct: 115 LLLVNKAEGM-----ARARVTAEFFELGLGEPYPISSAHGDNVVEVIEI---ALENFPEE 166
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ + + P +LAIVGRPNVGKSTL+NA+L E RV+ + G
Sbjct: 167 IVEEDAVVEDK---------------PPKLAIVGRPNVGKSTLVNAILGEQRVIAFDQPG 211
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE G+ ++DTAG +R K E+ SV+++ + + A+VV LV+DA
Sbjct: 212 TTRDSIYIDFERDGKQYTIIDTAGVRRRGKVEEAIEKFSVIKTMQAIEDANVVVLVVDAR 271
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ ++ GR LV+ VNK D L Q +E V +I+ + +
Sbjct: 272 DQITEQDAHVADFVLQAGRALVLAVNKWDGLDNHQ--------REMVKSDIERKLHFLGF 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
+ SAL G G V+ D Y ++ T +L R L + + K PK+
Sbjct: 324 AKRHYISALNGNGISNVLKSADDAYAAAMSKMSTPKLTRALLGATEKQAPPKVGRFLPKM 383
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q + PP V SG + + R+L +S E F L G P++I
Sbjct: 384 RYAHQGGSNPPLIVIHGSGLDNIPASYARYLERSFAEIFKLEGTPLKI 431
>gi|218437880|ref|YP_002376209.1| GTP-binding protein EngA [Cyanothece sp. PCC 7424]
gi|226741132|sp|B7KHD2.1|DER_CYAP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218170608|gb|ACK69341.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 452
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 246/472 (52%), Gaps = 54/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL ++A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEP--GITRDRTYRPAFWQDRDFQVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R MTA LA+ AIF++D ++G P D E+ WLR + I I
Sbjct: 61 LVFDDDTEFLPLIREQAMTA--LAEAHAAIFVVDGQTGPTPADEEIANWLRSQSVPI--I 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES+ G A+E LG G+P IS+ G G EL + L +
Sbjct: 117 LAVNKCESVEQGLIQ----ASEFWQLGLGEPYPISSIHGSGTGELLDKL----------I 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ T++ S T ++ ++AIVGRPNVGKS+LLNAL E+R +V P +G
Sbjct: 163 IYLPTTESLSETNEI------------KVAIVGRPNVGKSSLLNALTGENRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ + + + L+DTAG ++R+K E G S+ ++ K + RA VV V+DA
Sbjct: 211 TRDAIDMVVQRNEQQYRLIDTAG-IRRKKNVEYGAEFFSINRAFKAIRRADVVLFVIDAL 269
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EGR V+++NK D + + + +Y+ K +++ + +
Sbjct: 270 DGITDQDLKLAGRISDEGRATVLVINKWDAVD-KDSYTIYEYQK-----MLESRLYFMDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPK 524
++F SAL G+ ++ V + R+ T+ +N L++ HS Q Q K
Sbjct: 324 AEMIFVSALTGKRVEKILDLVDNATASHRRRVSTAVINEVLQEATTWHSPPTTRQGKQGK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQ+K+ PPT F++ K +D R++ + ++ G PIR+ R
Sbjct: 384 IYYGTQIKSEPPTITLFVNDPKRFNDNYRRYIERQFRQQLGFTGTPIRLIWR 435
>gi|427419525|ref|ZP_18909708.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
gi|425762238|gb|EKV03091.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
Length = 453
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 237/470 (50%), Gaps = 50/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL REA+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLAGAREAIVYDQP--GVTRDRTYQPAFWQDRDFMVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L A L LA+++ A+F++D + GL+ D E+ WLR+ + + ++
Sbjct: 61 L-VFADDSEFLPHIREQAMLALAESKAAVFVVDGQEGLNESDREIASWLRQQS--VPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G A E LG G+P A+S G G EL
Sbjct: 118 AVNKCESEDQGIIQ----ATEFWALGLGEPYAVSGIHGNGTGELL--------------- 158
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + T ++ EDDE +++AIVGRPNVGKS+LLNA + E+R +V +G T
Sbjct: 159 -DELVTHLPPTDEI--EEDDE----IKVAIVGRPNVGKSSLLNAFVGENRAIVSNISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + + L+DTAG +++ GP S+ ++ K + R+ VV LV+DA +
Sbjct: 212 RDTIDMVVRRKEAVYRLIDTAGIRKKKNVNYGPEFFSINRAFKAIRRSDVVLLVIDALDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R +EGR +++VNK D + + + +Y+ K ++ I +
Sbjct: 272 MTEQDQKLAGRIEDEGRACIIVVNKWDAIE-KDSHTIYEYDK-----KLGGKIYFLDWAT 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
++ SAL G+ ++ V + ++ R+ T+ +N L + HS Q Q +I
Sbjct: 326 RLYVSALTGQRVPKILDAVDEAVEQHRRRVSTAVVNEVLEDAISWHSPPTTRQGKQGRIY 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV ARPPTF F++ K +D R++ + +E+ G PIR+ R
Sbjct: 386 YGTQVSARPPTFTLFVNAGKLFTDNYRRYIERQFRENLGYEGTPIRLIWR 435
>gi|297829768|ref|XP_002882766.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
gi|297328606|gb|EFH59025.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 263/541 (48%), Gaps = 79/541 (14%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
+I +LL V I+GRPNVGKSALFNRL+ A+V + P VTRD G + GD F
Sbjct: 150 QIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPG--VTRDRLYGRSYWGDQEFV 207
Query: 174 VLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFAI------------------- 208
V+D+ G+ T + S S + T GM L+ + AI
Sbjct: 208 VVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESA 267
Query: 209 ---FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLG 265
F++D ++G D+E+ WLRK+ I+A+NKCES G A+E LG
Sbjct: 268 VIIFVVDGQAGSSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ----ASEFWSLG 323
Query: 266 FGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPL 325
F PI ISA +G G EL L+ C+ N E++E
Sbjct: 324 F-TPIPISALSGTGTGEL---------------LDLVCSGLNKIEIMENIEEEEEENYIP 367
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQ 384
+AI+GRPNVGKS++LNAL++EDR +V P +G TRD++ F G L+DTAG +
Sbjct: 368 AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRK 427
Query: 385 REKEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVI 430
+ S +SV ++ + + R+ VVALV++A ++++ E EG+G +V+
Sbjct: 428 KSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVV 487
Query: 431 VNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVI 488
VNK D + + + +A Y+ +++ + + P+V+++A+ G ++
Sbjct: 488 VNKWDTIPNKNQETAAHYE-------DDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAA 540
Query: 489 DTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKK 546
++ RL T+ LN+ +R+ + S + ++ Y TQ RPPTFV F++ K
Sbjct: 541 TVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAK 600
Query: 547 TLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR---KCGSSSSRQNTGQKVGRTFSDKR 603
SD R++ K L+ D G PIR+ RS R G + + G R + KR
Sbjct: 601 LFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMRMAGLTRQRNLATKR 660
Query: 604 T 604
T
Sbjct: 661 T 661
>gi|119897222|ref|YP_932435.1| GTP-binding protein EngA [Azoarcus sp. BH72]
gi|166224303|sp|A1K3Z3.1|DER_AZOSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119669635|emb|CAL93548.1| probable GTP-binding protein [Azoarcus sp. BH72]
Length = 442
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 242/474 (51%), Gaps = 60/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL + R+ALV + P +TRD G+ ++GD + V+D+AG
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRDALVADQPG--LTRDRHYGVGRVGDRDYLVVDTAGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ A G I+ A +A+ +F++D R+G P D ++ LR+ + +V
Sbjct: 61 DPVAKDG-IMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDDQIAAHLRRAGRPV--VVV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRVL 299
+NK E L T AA+ LG G P+A+SA G G+ L E L P D
Sbjct: 118 VNKAEGLDRAT-----VAADFHALGLGAPLAVSAAHGDGVKALVELVLAPFPAD------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+V + ED ++ AIVGRPNVGKSTL+N LL E+RV+ G T
Sbjct: 167 -----------DEVEAAEDAGPRV----AIVGRPNVGKSTLVNTLLGEERVIAFDMPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ + FE G+ L+DTAG +R K + SV+++ + + A+VV LVLDA +
Sbjct: 212 RDAIAIPFERGGKQYTLIDTAGLRRRGKVFEAVEKFSVIKTLQAIQEANVVVLVLDAAQD 271
Query: 419 RA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV----IPQV 464
+ ++ GR LVV +NK D + + + R+KE + +++ + Q+
Sbjct: 272 ISDQDAHIAGFVLDTGRALVVAINKWDAVDDYRRA----RLKEDMARKLAFLSFARFHQI 327
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQP 523
SAL G A++ V Y L T RL R ++ + + + + SA+P
Sbjct: 328 --------SALRAEGIAALLKSVDGAYAAAMSNLSTPRLTRTMQAAVAKQAPPRHGSARP 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + + ++ +RFL ++ E F L G P+RI R+
Sbjct: 380 KLRYAHQGGMNPPVIVIHGNALDHIPNSYVRFLERTFMEAFKLQGTPLRIQFRT 433
>gi|354564931|ref|ZP_08984107.1| GTP-binding protein engA [Fischerella sp. JSC-11]
gi|353550057|gb|EHC19496.1| GTP-binding protein engA [Fischerella sp. JSC-11]
Length = 453
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 237/471 (50%), Gaps = 50/471 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQSAIVYDQPG--VTRDRTYLPAFWRDREFMVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + L LA+ AIF++D R+G D E+ WLR+ + ++
Sbjct: 61 LVFNDDT-EFLPLIRQQAMAALAEASAAIFVVDGRTGPTAADEEIATWLRQQP--VPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AAE LG G+P +SA G G +L + L +Y+ V
Sbjct: 118 AVNKCESPEQGLIQ----AAEFWNLGLGEPFPVSAIHGSGTGDLLDKLI----NYLQPV- 168
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
QD+ P+ +E +++AIVGRPNVGKS+LLNA + E+R +V P +G T
Sbjct: 169 -----------QDL--PDINE----IKIAIVGRPNVGKSSLLNAFVGEERAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E G+T L+DTAG +++ E GP S+ ++ K + RA VV LV+DA +
Sbjct: 212 RDAIDTEIERNGQTYRLIDTAGIRKKKNVEYGPEFFSINRAFKAIRRADVVLLVIDAIDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R +EEGR VV+VNK D + + + +Y K +Q +
Sbjct: 272 VTEQDQKLAGRVIEEGRACVVVVNKWDAVD-KDSYTIYDYEK-----HLQERLHFTEWSE 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
+F SAL G+ ++ V ++ R+ TS +N L + + HS Q KI
Sbjct: 326 TIFVSALTGQRVEKILELVNQAAEEHKRRVSTSVINEVLEEAVRWHSPPVSRSGKQGKIY 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV +PPT F++ K +D R++ + ++ G PIR+ RS
Sbjct: 386 YGTQVSTQPPTIALFVNDAKRFNDNYRRYIERQFRQQLGFKGTPIRLIWRS 436
>gi|423016755|ref|ZP_17007476.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
gi|338780183|gb|EGP44598.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
Length = 451
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 237/473 (50%), Gaps = 43/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD+ F +D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGDIPFIAID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+GL+ D E+ LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G A AE LG G P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGMGAGA-----AIAEFHELGLGQPYPISAAHGDGIVDLIEL---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D + E D ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALQDLAEPPAEEEEAAEEGEHDHR---IKLAIVGRPNVGKSTLINTLMGEERVIAFDMP 217
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 218 GTTRDAIEIDFERDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 277
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +V+ +NK D L G + KE + +E + ++
Sbjct: 278 QTEISEQDAHIAGFVLETGRAVVLAINKWDGLDGEE--------KERIEREFMRKLRFLS 329
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
V SAL G+G ++ V + +L T +L R L+ + + + +PK
Sbjct: 330 FARVHTISALRGQGIKPLLKSVNAAHAAAFAKLSTPKLTRELQAAVEQQPPPRKGIFRPK 389
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + ++ D+ R+L + FDL G P+RI +S
Sbjct: 390 MRYAHQGGQNPPLVVIHGNALDSVPDSYRRYLETRFRNAFDLAGTPLRIEFKS 442
>gi|158320432|ref|YP_001512939.1| GTP-binding protein EngA [Alkaliphilus oremlandii OhILAs]
gi|166920096|sp|A8MH56.1|DER_ALKOO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158140631|gb|ABW18943.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs]
Length = 440
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 248/473 (52%), Gaps = 59/473 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ R ++V N P VTRD A+ + +F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKIAGERISIVENKP--GVTRDRIYAEAEWLNYQFTLIDTGGI 61
Query: 181 ETEATS--GSILDRTAGM---TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
E E+ + + R A + TANV+ IF++D R GL +D +V + LRK +
Sbjct: 62 EPESEEIIPAQMRRQAELAMETANVI------IFVVDGREGLTSVDRDVAELLRKTKKPV 115
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
IV +NK ++ H + E LG GDPI ISA GLG+ +L + +
Sbjct: 116 --IVTLNKVDTRHQ-----SEHFYEFYELGMGDPIEISASLGLGIGDLLDEV-------- 160
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
N + +D +DD +++A++G+PNVGKS+L+N +L E+RV+V
Sbjct: 161 ---------VKNFNPEDYNQYDDD----VIKVAMIGKPNVGKSSLINRILGEERVIVSDI 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD++ F L+DTAG ++ + + S++++ + ++ V LV+D
Sbjct: 208 AGTTRDAIDTPFTDGDDRYVLIDTAGIRRKSRITESIEKYSIVRAIAAVEKSDVCLLVID 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A E + E G+G+V++VNK D++ + N + + +K EI+ + +
Sbjct: 268 ASEGVTEQDKKIAGYSHENGKGMVIVVNKWDIIE-KDNHTMNEFIK-----EIRNELTYI 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQP 523
+ P+VF SAL G+ ++ +V + +R+PT LN + ++ + D+ +
Sbjct: 322 SYAPIVFVSALTGQRMNKILEEVKHVSNQNAMRIPTGALNEVIGEAILLNQAPSDKGKRL 381
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K+ Y TQ +PPTF+ F++ K+ + + LR+L ++E+F G PIR R
Sbjct: 382 KVFYATQASVKPPTFILFINDKELMHFSYLRYLENKIRENFGFEGTPIRFILR 434
>gi|148238904|ref|YP_001224291.1| GTP-binding protein EngA [Synechococcus sp. WH 7803]
gi|166225928|sp|A5GJ79.1|DER_SYNPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147847443|emb|CAK22994.1| GTP-binding protein engA [Synechococcus sp. WH 7803]
Length = 455
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 237/490 (48%), Gaps = 60/490 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEP--GVTRDRTYQDGYWGDRDFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + G+ D + ++LR + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALEEASVALVIVDGQQGVTASDEAIAEFLRGQ--RCPALLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLA----MAAEFWSLGLGEPYPISAIHGAGTAELL--------DQVLTYLP 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
E+ +S+ P+QLAI+GRPNVGKS+LLNA+ E R +V P G TR
Sbjct: 167 -------------PKSEEGDSEEPIQLAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 214 DTIDTSLVRENRPWRLVDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALDGV 273
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R E+GR VV+VNK D + ++ A+ +E++ + + P+
Sbjct: 274 TEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMT------AMEKELRAKLYFLDWAPM 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QPK 524
+FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q +
Sbjct: 328 LFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQGR 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRSVP 579
+ Y TQV +RPP+F F++ K D R++ + ++E G P+++ QR
Sbjct: 385 LYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFDGTPLKLFWRGKQQRDAE 444
Query: 580 RKCGSSSSRQ 589
R +RQ
Sbjct: 445 RDLARQQNRQ 454
>gi|395763286|ref|ZP_10443955.1| GTP-binding protein Der [Janthinobacterium lividum PAMC 25724]
Length = 448
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 240/469 (51%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ + A T +A+ +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMHQMALQTKQAVAEADVVVFIVDGRQGLTPHDKTIVDFLRKSGRPV--LLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + +E LG GDP AIS+ G G+ +L E + L+
Sbjct: 118 VNKSEGMR-----YTAVVSEFYELGMGDPYAISSAHGDGVNDLVEVM-----------LD 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ Q +++ +++ +++A+VGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 162 LAFAQRPDEPEEL-----EKTDRGIKIALVGRPNVGKSTLINTLLGEERVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++
Sbjct: 217 DSIEIPFERDGQQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L + ++ + +I + ++ +
Sbjct: 277 SEQDAHIAGFILESGRALVVAVNKWDGLQSHE--------RDEIKIDIDRKLDFLSFAQM 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ-SAQPKIKYF 528
F SAL+G +M + Y L T +L R L + + + + + S +PK++Y
Sbjct: 329 HFISALKGTNIAPLMKSLNAAYAAAMCDLSTPKLTRALIEAVEKQEPRRKGSIRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + D R+L K ++ F L G P+RI R+
Sbjct: 389 HQGGMNPPVIVIHGNALDAVGDPYKRYLEKHFRDTFALVGTPLRIELRT 437
>gi|311105363|ref|YP_003978216.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
gi|310760052|gb|ADP15501.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
Length = 450
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 238/473 (50%), Gaps = 44/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++G++ F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADYSG--LTRDRHYGEGRVGEIPFIVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G GS A +E LG G P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGM--GAGS---AISEFHELGLGQPYPISAAHGDGIVDLIEL---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D D ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALQDLAEPPAEEESPEEGEHDHR----IKLAIVGRPNVGKSTLINTLMGEERVIAFDMP 216
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 217 GTTRDAIEIDFERDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 276
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +VV +NK D L G KE + +E Q + ++
Sbjct: 277 QTEISEQDAHIAGFVLETGRAVVVAINKWDGLDG--------EAKERIEREFQRKLRFLS 328
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL G+G ++ + + +L T +L R L+ + + + +PK
Sbjct: 329 FARMHTISALRGQGVKPLLKSINAAHAAAFAKLSTPKLTRELQTAVEQQQPPRKGIFRPK 388
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 389 MRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLETRFRNAFDLAGTPLRIEFKS 441
>gi|428214882|ref|YP_007088026.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
gi|428003263|gb|AFY84106.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
Length = 454
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 247/494 (50%), Gaps = 60/494 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NR+ ++A+V++ P VTRD A D F+++D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRIAGGKQAIVHDEP--GVTRDRTYRDAFWQDRDFQIVDTGG 60
Query: 180 L----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
L ETE L R +TA L+++ A+F++D + G+ D E+ WLR ++
Sbjct: 61 LVFDDETEFLP---LIREQVLTA--LSESSVALFIVDGQQGVTEADREIANWLRHQ--KV 113
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
++A+NKCESL G AAE LG G+P ISA G G +L + + P +
Sbjct: 114 PVVLAVNKCESLMEGLTQ----AAEFWELGMGEPYPISAIHGSGTGDLLDVVIPHL---- 165
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLP-LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
P + ++P +++AIVGRPNVGKS+LLNA + E R +V P
Sbjct: 166 -------------------PPTSEIEEIPEIKVAIVGRPNVGKSSLLNAFVGEKRAIVSP 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
+G TRDS+ E G ++DTAG +++ E GP + ++ K + RA VV LV+
Sbjct: 207 ISGTTRDSIDTFVERNGTNYRIIDTAGIRKKKNVEYGPEFFGINRAFKAIRRADVVLLVI 266
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R E+GR V+++NK D + + + +Y ++I++ +
Sbjct: 267 DAIDGVTEQDQKLAGRIEEDGRACVIVINKWDAIE-KDSYTIYD-----YERDIKSRLYF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSA 521
+ +F SA G+ ++ V + + R+ TS +N L+ + HS Q
Sbjct: 321 LEWAEAIFVSAATGKRVENILDLVDKSADEHRRRVSTSVINEVLKDALHWHSPPTSRQGK 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Q KI Y TQV ++PPT F++ K +D R++ + +E G P+R+ R +
Sbjct: 381 QGKIYYGTQVTSQPPTIALFVNDPKRFNDNYRRYIERQFREQLGFTGSPLRLLWRGKKAR 440
Query: 582 CGSSSSRQNTGQKV 595
++ N KV
Sbjct: 441 DFEDNNTTNRAVKV 454
>gi|33593199|ref|NP_880843.1| GTP-binding protein EngA [Bordetella pertussis Tohama I]
gi|33597408|ref|NP_885051.1| GTP-binding protein EngA [Bordetella parapertussis 12822]
gi|33602148|ref|NP_889708.1| GTP-binding protein EngA [Bordetella bronchiseptica RB50]
gi|384204496|ref|YP_005590235.1| GTP-binding protein EngA [Bordetella pertussis CS]
gi|408415647|ref|YP_006626354.1| GTP-binding protein [Bordetella pertussis 18323]
gi|410419768|ref|YP_006900217.1| GTP-binding protein [Bordetella bronchiseptica MO149]
gi|410473477|ref|YP_006896758.1| GTP-binding protein [Bordetella parapertussis Bpp5]
gi|427814227|ref|ZP_18981291.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
gi|427821304|ref|ZP_18988367.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
gi|427821832|ref|ZP_18988894.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
gi|41017018|sp|Q7VWL4.1|DER_BORPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41017021|sp|Q7W6Q0.1|DER_BORPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41017022|sp|Q7WHN4.1|DER_BORBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33563574|emb|CAE42473.1| putative GTP-binding protein [Bordetella pertussis Tohama I]
gi|33573835|emb|CAE38143.1| putative GTP-binding protein [Bordetella parapertussis]
gi|33576586|emb|CAE33664.1| putative GTP-binding protein [Bordetella bronchiseptica RB50]
gi|332382610|gb|AEE67457.1| GTP-binding protein EngA [Bordetella pertussis CS]
gi|401777817|emb|CCJ63158.1| putative GTP-binding protein [Bordetella pertussis 18323]
gi|408443587|emb|CCJ50257.1| putative GTP-binding protein [Bordetella parapertussis Bpp5]
gi|408447063|emb|CCJ58735.1| putative GTP-binding protein [Bordetella bronchiseptica MO149]
gi|410565227|emb|CCN22780.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
gi|410572304|emb|CCN20576.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
gi|410587097|emb|CCN02127.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
Length = 451
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 242/474 (51%), Gaps = 45/474 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGDTPFLVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G IL A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDG-ILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G G+ G E LG G+P ISA G G+ +L +E +
Sbjct: 117 VLLAVNKAEGM--GVGNATGDFHE---LGLGEPHPISAAHGDGIVDL-------IEIALS 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
++ QDV ++LAIVGRPNVGKSTL+N LL E+RV+
Sbjct: 165 GLVAPPADTGEQLEQDVVDHR-------IKLAIVGRPNVGKSTLINTLLGEERVIAFDMP 217
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L++DA
Sbjct: 218 GTTRDAIEIDFERDGRKYTLIDTAGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDA 277
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ EV +E GR +VV +NK D L Q +E + +E Q + +
Sbjct: 278 QAEVSEQDAHIAGFVLETGRAVVVAINKWDGLDSDQ--------RERIEREFQRKL-RFL 328
Query: 466 GIPVVFT-SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
G + T SAL+G+G ++ V + +L T RL R L+ + + + +P
Sbjct: 329 GFARMHTISALKGQGVKPLLKSVNAAHAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRP 388
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 389 KMRYAHQGGQNPPLIVIHGNALDAVPDSYRRYLETRFRNAFDLAGTPLRIEFKS 442
>gi|329120372|ref|ZP_08249039.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
BAA-1200]
gi|327462327|gb|EGF08653.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
BAA-1200]
Length = 490
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 243/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV++ P +TRD G +LG + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRSKDALVHDLPG--LTRDRHYGHGRLGSKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQ-SP--RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E G AAE L G+P IS G G+ L E + S D
Sbjct: 115 YLAVNKGEG-----GRHDVLAAEFYELALGEPRVISGAHGDGVYHLIEDILDSFPD---- 165
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
Q ++T+ K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 166 ------AQEETATE----------KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K ++ SV+++ + + ++V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEASNVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D +S + + + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDGISEER--------RNDIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
F SAL+ +G + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHFISALKEKGIDGLFDSIQAAYDAAMIKMPTPKITRVLQSAVERQQPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + +S++ R+LT++ ++ F L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNALQHISESYTRYLTQTFRKAFHLQGTPLRI 428
>gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS]
gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS]
Length = 447
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 239/471 (50%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL + R+A+V + +TRD G +LG F V+D+ G
Sbjct: 3 PVVALVGRPNVGKSTLFNRLTQTRDAIVADYAG--LTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A SG I A T +A+ IF++D R GL D ++ LR+ KP ++
Sbjct: 61 EPDAGSG-IYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLG---KPCVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRV 298
A NK E +H+GT + LGFGD +SA G GM +L E AL P
Sbjct: 117 AANKAEGMHDGT-----KLVDFYELGFGDVHGVSAAHGQGMRDLVELALEP--------- 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
LN + + DV P ++LA+ GRPNVGKSTL+N L E+R++ G
Sbjct: 163 LNLPDPDDETDEDDVNKP--------IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V FE G+ L+DTAG ++ K + SV+++ + + A+VV L+LDA +
Sbjct: 215 TRDAISVPFERNGQRFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQ 274
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR +V+ +NK D + Q +E + ++I+T +P +
Sbjct: 275 GVTDQDAHIAGYILESGRAVVIAINKWDAVDSYQ--------REQIQRQIETRLPFLKFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQPKIK 526
+ F SA++ +G V + ++ ++ T L R L V + + +PK++
Sbjct: 327 SLHFISAIKRQGLGPVWQAIAQAHKSATRKMSTPVLTRLLLEAVQFQAPQRGGMFRPKLR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP + + + ++DA RFL +++FDL G P+RI +S
Sbjct: 387 YAHQGGMNPPVIIIHGNSLEHVTDAYKRFLEGRFRKEFDLVGTPLRIQFKS 437
>gi|71908594|ref|YP_286181.1| GTP-binding protein EngA [Dechloromonas aromatica RCB]
gi|123760409|sp|Q47BS0.1|DER_DECAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71848215|gb|AAZ47711.1| Small GTP-binding protein protein domain:GTP-binding protein
[Dechloromonas aromatica RCB]
Length = 443
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 234/467 (50%), Gaps = 55/467 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL + R+A+V + P +TRD G KLG + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTKSRDAIVADMPG--LTRDRHYGHGKLGKKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E G IL A T +A+ IF++D RSGL P D E+ LR+ +P+ V
Sbjct: 61 EPLVKEG-ILHEMARQTEQAIAEADAIIFVVDGRSGLTPHDKEIANKLRRID---RPVFV 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK E +++G AE LG G+P AISA G G+ L E
Sbjct: 117 AVNKAEGMNSGM-----VEAEFHELGLGEPNAISAAHGEGIRGLVEM------------- 158
Query: 300 NDSCTQNNSSTQDVTSPEDDE-SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + PE+DE +++AIVGRPNVGKSTL+N LL E+RV+ G
Sbjct: 159 ---------ALESFPEPEEDEWHSDSVRVAIVGRPNVGKSTLINTLLGEERVIAFDAPGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + FE GR LVDTAG +R K + SV+++ +++ A+VV L++DA+
Sbjct: 210 TRDSIEIDFERGGRKYVLVDTAGMRKRGKVFESIEKFSVVKTLQSIEDANVVILMVDAQA 269
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ ++ GR LVV VNK D L Y R E Q +Q + +
Sbjct: 270 DVSDQDAHIADFILQSGRALVVAVNKWDGLDA------YTR--EQTRQILQRKLKFLDFA 321
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIK 526
F SA + G + V Y ++ T RL R L + + + K +PK +
Sbjct: 322 KFHFISARDNIGLGNMFRSVDSAYAAAMAKMTTPRLTRVLIDAVAKQAPAKHGLFRPKPR 381
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y Q + PP V + ++D+ R+L + +E F L G P+RI
Sbjct: 382 YAHQGGSNPPIIVVHGNAVDQVTDSYRRYLEHTFREAFKLQGTPLRI 428
>gi|406980534|gb|EKE02122.1| hypothetical protein ACD_20C00425G0019 [uncultured bacterium]
Length = 444
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 236/470 (50%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS NRL+ RE++V + P VTRD + F V+D+ G+
Sbjct: 5 PIVAIVGRPNVGKSTFVNRLLGSRESIVDDMP--GVTRDRLYFNVEWAGKDFTVIDTGGI 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
I+ + IFM+D + GL+P+D++V LRK KPI +
Sbjct: 63 -VPGVEDEIMMSIYTQVEIATEEADVIIFMVDGKEGLNPVDIDVANLLRKSE---KPIFL 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG-MTELYEALRPSVEDYMLRV 298
+NK + A+ LG GDP +S+ G G + +L + + ++ D++
Sbjct: 119 TVNKIDVPEK-----TSLIADFYALGIGDPYPVSSMHGTGGVGDLLDDIVKAIPDFV--- 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D+E+K P+ LAIVGRPN GKS+L+N+LL E+RV+V AG
Sbjct: 171 ------------------SDEETK-PVHLAIVGRPNAGKSSLVNSLLGEERVIVSEVAGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + G LVDTAG ++ + E G SV +S K + + V L++DA E
Sbjct: 212 TRDAINTNLCVDGNCYTLVDTAGIRRKARVEYGIEKFSVARSIKAIRESDVTLLIIDATE 271
Query: 418 VRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++ GRG+V++VNK DL+ + ++ + + K I++ P ++
Sbjct: 272 GITDQDKKIGEISNDAGRGIVIVVNKWDLIEDKHSTTINEFTK-----TIRSEAPHLSFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
P++F SAL + + V++ Y+ ++ TS LN+ + + + Q + K
Sbjct: 327 PIIFISALTKQRITKIFPAVLEAYEYSHKKITTSLLNKVILEAFALNPPTSKQGKRVKAF 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV + PTFV F++ K +SD+ LR+L L+E F G PI+I R
Sbjct: 387 YSTQVGVQAPTFVVFVNDTKLMSDSYLRYLENKLREAFGFFGTPIKIIVR 436
>gi|33862476|ref|NP_894036.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9313]
gi|41017013|sp|Q7V8X0.1|DER_PROMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33640589|emb|CAE20378.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
[Prochlorococcus marinus str. MIT 9313]
Length = 455
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 238/489 (48%), Gaps = 60/489 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V + P VTRD GD FKV+D+ GL
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKP--GVTRDRTYQDGFWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L LA+ A+ ++D + G+ D + +WLR +VA
Sbjct: 62 VFDDDS-EFLPEIREQANLALAEASVALVIVDGQQGVTAADESIAEWLRTQP--CPTLVA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G +L D +L +L
Sbjct: 119 VNKCESPDQGLA----MAAEFWRLGLGEPFPISAIHGAGTGDLL--------DRVLSLLP 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ PE+DE P+Q+AI+GRPNVGKS+LLNA+ E R +V P G TR
Sbjct: 167 PKHEE----------PEEDE---PIQMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ E +G L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 214 DTIDTRLEREGHPWRLIDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALDGV 273
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R ++GR V++VNK D + ++ V +E++ + + +
Sbjct: 274 TEQDQRLAGRIEDDGRACVLVVNKWDAVEKDSHTM------PMVEKELRAKLYFLDWATM 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QPK 524
+FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q +
Sbjct: 328 LFTSALTGQRVESIFALASLAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTSRGGRQGR 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRSVP 579
+ Y TQV +RPP+F F++ K D R++ + L+E G P+++ QR+
Sbjct: 385 LYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQLREGLGFDGTPLKLFWRGKQQRAAE 444
Query: 580 RKCGSSSSR 588
R+ +R
Sbjct: 445 RELARQQNR 453
>gi|282900427|ref|ZP_06308377.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
gi|281194740|gb|EFA69687.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
Length = 453
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 238/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL + A+V++ P VTRD A + F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPG--VTRDRTYRPAFWQNREFLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R +TA L++ AIF++D ++GL P D E+ +WLR+ + +
Sbjct: 61 LVFNDDTEFLPLIRQQAITA--LSEACAAIFVVDGQTGLTPADEEIAEWLRQQP--VPTL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G A+E LG G+P ISA G G +L + L
Sbjct: 117 LAVNKCESPDQGIIQ----ASEFWELGLGEPYPISAIHGSGTGDLLDDL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
Q + E+ + +++AIVGRPNVGKS+LLNA + E+R +V P +G
Sbjct: 162 -----------IQYIPQVEELQENTEVKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E +G+ L+DTAG +++ E G S+ ++ K + RA VV LVLDA +
Sbjct: 211 TRDTIDTLIEREGQAYRLIDTAGIRKKKHVEYGTEFFSINRAFKAIRRADVVLLVLDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R VE+GR +++VNK D++ + + +Y K ++ +
Sbjct: 271 GVTEQDQKLAGRIVEDGRACIIVVNKWDVVE-KDSYTIYDHEK-----SLEARLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+F SA+ G+ ++ V + R+ TS +N L + HS Q KI
Sbjct: 325 DTIFVSAITGQRVEKILDLVNKAAESHKRRVSTSVVNEVLTDAVSWHSPPASRSGKQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV ++PPTF F++ K ++ R++ + ++ G PIRI RS
Sbjct: 385 YYGTQVSSQPPTFALFVNDAKRFNENYRRYIERQFRKQLGFEGTPIRILWRS 436
>gi|226503143|ref|NP_001146320.1| uncharacterized protein LOC100279896 [Zea mays]
gi|219886617|gb|ACL53683.1| unknown [Zea mays]
Length = 653
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 271/572 (47%), Gaps = 81/572 (14%)
Query: 62 SLKCNLLPEVPRGFCGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLP 121
++ + E RG + + H++ D V E K + + +K I NLLP
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHID---DDVRE--KRRNIRDKTSVSKHIPDNLLP 153
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
V IIGRPNVGKSALFNRL+ A+V + P VTRD G + GD F V+D+ G+
Sbjct: 154 KVAIIGRPNVGKSALFNRLVGGNRAIVVDEPG--VTRDRLYGRSYWGDHEFMVIDTGGVI 211
Query: 182 TEATSGS------ILDRTAGMTANVLAKTQFAI----------------------FMIDV 213
T + S + + T GM A + AI F++D
Sbjct: 212 TLSKSQAGVMEELAVTTTVGMDGIPFATREAAIARMPSMIEKQAVAAVDEASVILFVVDG 271
Query: 214 RSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAIS 273
++GL D+E+ WLR++ ++A+NKCES G A + LGF P+ IS
Sbjct: 272 QAGLVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQ----ALDFWSLGFS-PLPIS 326
Query: 274 AETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRP 333
A TG G +L + + + + + + + E++++K+P +AIVGRP
Sbjct: 327 AITGTGTGDLLDLVCSELRKFEV----------------LDAVEEEKNKVP-AIAIVGRP 369
Query: 334 NVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAGWLQR----EKE 388
NVGKS++LNAL+ EDR +V P +G TRD++ F G L+DTAG +R
Sbjct: 370 NVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDTAGIRRRTAVISAG 429
Query: 389 KGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLS 438
SLSV ++ + + R+ VVALV++A R +EG+ V++VNK D +
Sbjct: 430 STTESLSVKRAFRAIRRSDVVALVIEAMACVTEQDYKIAERIEKEGKACVIVVNKWDTIP 489
Query: 439 GRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 498
+ + + Q+++ + + P+V+ SA G ++ ++ RL
Sbjct: 490 NKNHESTTH-----YEQDVREKLRILDWAPIVYCSATNGTSVEKIISAAALVEKERSRRL 544
Query: 499 PTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFL 556
TS LN+ +R+ + S + ++ Y TQ PPTFV F++ K D R++
Sbjct: 545 STSILNQVIREAIAFKSPPRTRGGKRGRVYYTTQAAVGPPTFVLFVNDAKLFPDTYRRYM 604
Query: 557 TKSLKEDFDLGGIPIRITQRS--VPRKCGSSS 586
K L+ D G PIR+ RS P K G S+
Sbjct: 605 EKKLRSDAGFPGTPIRLLWRSRRRPDKRGKSA 636
>gi|332284650|ref|YP_004416561.1| GTP-binding protein [Pusillimonas sp. T7-7]
gi|330428603|gb|AEC19937.1| GTP-binding protein [Pusillimonas sp. T7-7]
Length = 478
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 241/480 (50%), Gaps = 41/480 (8%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GR NVGKS LFNR+ R R ALV + +TRD G ++G+ F +D+ G
Sbjct: 8 PVVALVGRANVGKSTLFNRITRSRAALVADFSG--LTRDRHYGEGRVGEHPFIAVDTGGF 65
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G +L+ A T +A++ IF++D R+G++ D E+ + LRK ++ +A
Sbjct: 66 EPVAKDGILLE-MARQTQQAIAESDVVIFLVDARAGVNAHDHEIARLLRKSGQRV--FLA 122
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED------- 293
+NK E + G+ A AE LG G+P AISA G G+ EL E ++D
Sbjct: 123 VNKAEGMRYGS-----ATAEFHELGLGEPHAISASHGDGVVELIERALSYMDDLPDAGTD 177
Query: 294 ----YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+M + + QD ++ ++LAIVGRPNVGKSTL+N LL EDR
Sbjct: 178 DEPDFMPDDAEPVLADGDLAEQDTNQEPEEPVSHRIKLAIVGRPNVGKSTLINTLLGEDR 237
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHV 408
V+ G TRD++ + FE G + L+DTAG +R K + SV+++ + + +V
Sbjct: 238 VIAFDMPGTTRDAIEIEFERNGVSYTLIDTAGLRRRGKVFEAIEKFSVIKTLQAIEACNV 297
Query: 409 VALVLDAE-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V L+LDA+ E+ +E GR LVV +NK D L Q +E + ++
Sbjct: 298 VVLMLDAQTEISDQDAHIAGFVLETGRALVVAINKWDGLDSEQ--------RERIQRDFD 349
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
+ ++ + SAL+G+G ++ V + +L T +L R L + +
Sbjct: 350 RKLHFLSFAKMHTVSALKGQGVNVLIKSVNAAHAAAFAKLSTPKLTRVLHAAVEQQQPPR 409
Query: 519 QSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ +PK++Y Q PP + + +SD+ R+L + +F L G P+RI +S
Sbjct: 410 KGIFRPKMRYAHQGGQNPPLIIIHGNAIDAISDSYRRYLEGRFRSEFKLDGTPLRIEFKS 469
>gi|303257594|ref|ZP_07343606.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
gi|330999635|ref|ZP_08323344.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
YIT 11859]
gi|302859564|gb|EFL82643.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
gi|329574141|gb|EGG55717.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
YIT 11859]
Length = 443
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 240/471 (50%), Gaps = 49/471 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++GD + V+D+
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRHYGDGRIGDKPYLVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E T G I+ G + ++ +F++D R+GL P D + + LR+ K
Sbjct: 59 GFEPIRTEG-IVKEMTGQAQLAITESDVVLFLVDGRAGLTPQDQRIAQNLRESGK--KTY 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E L A AE L G+P ISA G G+ +
Sbjct: 116 LVVNKAEGLTET------AKAEFYELALGEPYTISAAHGEGV----------------KA 153
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L D + + +++ ED + K+ ++AI GRPN GKSTL+NAL+ EDR++ G
Sbjct: 154 LMDLVLEPFPTEKEIDEEEDFKHKI--KVAIAGRPNAGKSTLINALIGEDRLIAFDMPGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V F+Y+ R L+DTAG ++ K + SV+++ + + ++VV L+LDA
Sbjct: 212 TRDAIEVEFQYKDRDYTLIDTAGLRRKGKVFEAIEKFSVIKTLQAIESSNVVVLLLDAHA 271
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A +E GR LVV VNK D L + +RVKE E++ + +
Sbjct: 272 GIAEQDANIAGYILESGRALVVGVNKWDSLDDYER----RRVKE----ELERKLHFLRWA 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
+V+ SALE RG +++ V D + ++L T +L R L + R + +PK++
Sbjct: 324 KIVYISALEKRGLHHLLNAVNDAHTAAFMKLSTPKLTRALIEATTRQLPPRAGGGRPKMR 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + + + ++ R+L ++ F L G P+RI R+
Sbjct: 384 YAHQGGQNPPVIVVHGNALQDVPESYRRYLEGWFRDKFKLEGTPLRIEFRT 434
>gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259]
gi|123773049|sp|Q3SL66.1|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259]
Length = 469
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 241/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT++++GRPNVGKS LFNRL R+ALV++ P +TRD G ++G + V+D+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPG--MTRDRHYGRGRIGGKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GLE G IL A T + + IFM+D R+G+ P D + LR+ + +
Sbjct: 59 GLEPVVKDG-ILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRVTSPV--L 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLR 297
+A+NK E ++ A AE LG G+P+AIS G G+ +L EAL P E+
Sbjct: 116 LAVNKAEGMNR-----AVVTAEFHELGLGEPLAISGAHGDGIADLVAEALAPFPEE---- 166
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ D P ++A+VGRPNVGKSTL+NAL+ +RV+ + G
Sbjct: 167 ---------EEASDDFGVP---------KIALVGRPNVGKSTLVNALVGAERVIAFDQPG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ V FE G+ L+DTAG +R K + SV+++ + + A+VV LVLDA
Sbjct: 209 TTRDSIYVDFERGGKPYVLIDTAGVRRRGKVFETVEKFSVIKTLQAIEDANVVVLVLDAR 268
Query: 417 EVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E + +E GR LVV +NK D LS Q ++ V ++I + +
Sbjct: 269 ENISEQDAHLAGFVLETGRALVVAINKWDGLSAEQ--------RDDVKRDIGRKLAFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
+ SAL+ +G ++ + + ++L T +L R L + +H+ K+ +PK
Sbjct: 321 ARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRVLEMAVEQHAPPKNGLFRPKP 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + L D R+L S ++ F L G P+RI
Sbjct: 381 RYAHQGGKNPPVIVLHGNALEGLRDDYKRYLESSFRKAFKLQGTPLRI 428
>gi|298492105|ref|YP_003722282.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
gi|298234023|gb|ADI65159.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
Length = 454
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 237/475 (49%), Gaps = 58/475 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A G+ F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQTAIVHDEPG--VTRDRTYRPAFWGNREFVVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L++ AIF++D + G P D E+ WL H + +
Sbjct: 61 LVFNDDTEFLPLIRQQALMA--LSEACAAIFVVDGQRGPMPADQEIADWL--HQQPVPIL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYM 295
+A+NKCES G +G LG G+P ISA G G E+ + L P+V+D
Sbjct: 117 LAVNKCESPDQGLIQASGF----WELGLGEPYPISAIHGSGTGEILDELITHVPNVKD-- 170
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
SPED+ +++AI+GRPNVGKS+LLNA + E+R +V P
Sbjct: 171 -------------------SPEDN----VIKVAIIGRPNVGKSSLLNAFVGEERAIVSPI 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ G+T L+DTAG +++ E G S+ ++ K + RA VV LVLD
Sbjct: 208 SGTTRDTIDTEIVRNGQTYRLIDTAGIRKKKHIEYGTEFFSINRAFKAIRRADVVLLVLD 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AE+ R EEGR +++VNK D + + + +Y K ++ +
Sbjct: 268 AEDGATEQDQKLAGRITEEGRACIIVVNKWDAVE-KDSYTIYDYEK-----GLEARLHFT 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--Q 522
++F SA+ G+ ++ V Q R+ TS +N L + HS Q
Sbjct: 322 EWADIIFVSAVTGQRVEKILELVNKAAQAHKRRVTTSVVNEVLTDAVSWHSPPTSRGGRQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI Y TQV +PPTF F++ + +D R++ + ++ G PIR+ RS
Sbjct: 382 GKIYYGTQVSTQPPTFALFVNDAQRFNDNYRRYIERQFRKQLGFDGTPIRLFWRS 436
>gi|255764471|ref|YP_003064835.2| GTP-binding protein EngA [Candidatus Liberibacter asiaticus str.
psy62]
gi|254547822|gb|ACT56895.2| GTP-binding protein EngA [Candidatus Liberibacter asiaticus str.
psy62]
Length = 470
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 255/488 (52%), Gaps = 55/488 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++ T+ I+G PNVGKS LFNRL++++ A+V N P +TRD G A + + F ++D+A
Sbjct: 1 MIYTIAIVGAPNVGKSTLFNRLVKKKMAVVGNHPG--ITRDRLYGQAIINGVIFNIVDTA 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ + + SI + T + + +F+ID ++G+ P D + +LRK I I
Sbjct: 59 GI-ADGKNCSIAKQMNDQTELAINEAHLILFLIDSKAGITPYDHAITSFLRKK--NIPII 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTEL----YEALRPSVEDY 294
+ NK + T E L F + + ISAE LG +EL ++ + ++
Sbjct: 116 IVSNKMD-----TRIAQRNFYEIYSLDFKEIVEISAEHDLGTSELHSVIFKIFKQKYPNH 170
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESK---LPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
L ++ ++ S +++TS K PL++A+VGRPNVGKSTL+N LL +R+L
Sbjct: 171 PLEMIENNKRNEESPKENITSEGKSSVKNISKPLRIAVVGRPNVGKSTLINRLLGYNRLL 230
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHV 408
G ++G+TRDSV + + ++ + + DTAG R+ + SL +V +S +++
Sbjct: 231 TGSQSGITRDSVSISWNWKNHPIEIFDTAG--MRKPSRITESLEQKTVKKSMQSVRTCET 288
Query: 409 VALVLDA------EEVRAVEE----GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
++LDA +++R V+ G +V+ +NK D++S + N R K A+
Sbjct: 289 TIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTK-AIKN--- 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK--------- 509
+PQ+ I + S G G +M V++ + W R+ TS LN WL+K
Sbjct: 345 --LPQIGDIYINTISGRTGEGLDDLMVSVLEINKLWKTRITTSYLNSWLQKTQLQNPPPT 402
Query: 510 VMGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
+ R++ ++KY TQ+++ PP+F+ F + + ++ R+L L+ +F L GI
Sbjct: 403 IFNRYN--------RLKYITQIQSSPPSFLIFCTFPNKIPESYKRYLINRLRINFSLSGI 454
Query: 570 PIRITQRS 577
PIR+ +S
Sbjct: 455 PIRMCFQS 462
>gi|39997323|ref|NP_953274.1| GTP-binding protein Der [Geobacter sulfurreducens PCA]
gi|409912667|ref|YP_006891132.1| GTPase EngA [Geobacter sulfurreducens KN400]
gi|81832003|sp|Q74AX4.1|DER_GEOSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|39984214|gb|AAR35601.1| GTPase EngA [Geobacter sulfurreducens PCA]
gi|298506260|gb|ADI84983.1| GTPase EngA [Geobacter sulfurreducens KN400]
Length = 438
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 242/475 (50%), Gaps = 51/475 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+GRPNVGKS LFNRL+ RR+A+V + P VTRD D+ F ++D+
Sbjct: 2 ILPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPG--VTRDRNYETVTRFDVPFILIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E +S +L + + + + +F++D R+GL+P D+EV + LR+ KP+
Sbjct: 60 GFEPE-SSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVD---KPV 115
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+NK + +L AA+E LG + + ISAE G+ +L + + ++
Sbjct: 116 FFVVNKVDG-----ETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAAL------ 164
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
Q TSPE+ + ++A+VGRPNVGKS+L+N LL +RV+ P G
Sbjct: 165 ------------PQRTTSPEERNAT---KIAVVGRPNVGKSSLVNRLLGYERVVANPTPG 209
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDSV F + L+DTAG ++ K + SV+ S +++ RA VV +VL+AE
Sbjct: 210 TTRDSVDTWFTCNKKRYLLIDTAGIRRKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAE 269
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E A E G+ + +VNK D + + NS++ + V +I+T +
Sbjct: 270 EGVTEQDERIAGYAFEAGKACIFVVNKWDAIE-KDNSSVGRFV-----DKIRTEFKYLAF 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLR-KVMGRHSWKDQSAQPKI 525
+P+VF SA G+ +M +V ++ R+ TS LNR V H + K
Sbjct: 324 VPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRVTTSELNRIFSAAVESHHHPLVMGRRVKF 383
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ TQV RPPTFV F + + + R+L +E FD G P+R+ R R
Sbjct: 384 YFATQVGTRPPTFVIFTNRPDGMHFSYERYLVNKFREAFDFTGTPLRLLFRGRER 438
>gi|398807433|ref|ZP_10566311.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
gi|398089443|gb|EJL79959.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
Length = 447
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 241/472 (51%), Gaps = 52/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL + R+A+V + +TRD G +LG F V+D+ G
Sbjct: 3 PVVALVGRPNVGKSTLFNRLTQTRDAIVADFAG--LTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A SG I A T +A+ IF++D R GL D ++ LR+ KP ++
Sbjct: 61 EPDAGSG-IYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLG---KPCVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRV 298
A NK E +H+GT + LGFGD +SA G GM +L E AL P
Sbjct: 117 AANKAEGMHDGT-----KLVDFYELGFGDVHGVSAAHGQGMRDLVELALEP--------- 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
LN + + +V P ++LA+ GRPNVGKSTL+N L E+R++ G
Sbjct: 163 LNLPDPDDEADEDEVNKP--------IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPA--SLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ V FE G+ L+DTAG L+R+ A SV+++ + + A+VV L+LDA
Sbjct: 215 TRDAISVPFERNGQRFELIDTAG-LRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDAT 273
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ +E GR +V+ +NK D + Q +E + ++I+T +P +
Sbjct: 274 QGVTDQDAHIAGYILESGRAVVIAINKWDAVDSYQ--------REQIQRQIETRLPFLKF 325
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKI 525
+ F SA++ +G V + ++ ++ T L R L + + + K +PK+
Sbjct: 326 AALHFISAIKRQGLGPVWQAIAQAHKSATRKMSTPVLTRLLLEAVQFQAPKRGGMYRPKL 385
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q PP V + + ++DA RFL +++FDL G P+RI +S
Sbjct: 386 RYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLEGRFRKEFDLVGTPLRIEFKS 437
>gi|33865191|ref|NP_896750.1| GTP-binding protein EngA [Synechococcus sp. WH 8102]
gi|41017009|sp|Q7U8G2.1|DER_SYNPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33638875|emb|CAE07172.1| putative GTP-binding protein [Synechococcus sp. WH 8102]
Length = 455
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 240/493 (48%), Gaps = 64/493 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V++ P VTRD GD FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEP--GVTRDRTYQDGYWGDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A + + A+ ++D + G+ D + ++LR ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALAMEEASVAVVIVDGQQGITAADESIAEFLRSRP--CPTLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G+G +L D +L L
Sbjct: 119 VNKCESPEQGLA----MAAEFWSLGLGEPHPISAIHGVGTGDLL--------DQVLTFL- 165
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
P+D E + P+Q+AI+GRPNVGKS+LLNA+ E R +V P G
Sbjct: 166 --------------PPKDQEGDEEEPIQMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 TRDTIDTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFGINRSFKAIDRSDVCVLVIDALD 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R E+GR VV+VNK D + ++ A+ +E++ + +
Sbjct: 272 GVTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMT------AMEKELRAKLYFLDWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----Q 522
P++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 PMLFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRS 577
++ Y TQV +RPP+F F++ K D R++ + ++E G P+++ QR
Sbjct: 383 GRLYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFDGTPVKLYWRGKQQRD 442
Query: 578 VPRKCGSSSSRQN 590
R +RQ+
Sbjct: 443 AERDMVRQQNRQS 455
>gi|412338299|ref|YP_006967054.1| GTP-binding protein [Bordetella bronchiseptica 253]
gi|408768133|emb|CCJ52892.1| putative GTP-binding protein [Bordetella bronchiseptica 253]
Length = 451
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 242/473 (51%), Gaps = 43/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGDTPFLVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G IL A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDG-ILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G G+ A ++ LG G+P ISA G G+ +L +E +
Sbjct: 117 VLLAVNKAEGM--GVGN---ATSDFHELGLGEPHPISAAHGDGIVDL-------IEVALS 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
++ QDV ++LAIVGRPNVGKSTL+N LL E+RV+
Sbjct: 165 GLVAPPVDTGEQLEQDVVDHR-------IKLAIVGRPNVGKSTLINTLLGEERVIAFDMP 217
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L++DA
Sbjct: 218 GTTRDAIEIDFERDGRKYTLIDTAGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDA 277
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ EV +E GR +VV +NK D L Q +E + +E Q + ++
Sbjct: 278 QAEVSEQDAHIAGFVLETGRAVVVAINKWDGLDSDQ--------RERIEREFQRKLRFLS 329
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL+G+G ++ V + +L T RL R L+ + + + +PK
Sbjct: 330 FARMHTISALKGQGVKPLLKSVNAAHAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPK 389
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 390 MRYAHQGGQNPPLIVIHGNALDAVPDSYRRYLETRFRNAFDLAGTPLRIEFKS 442
>gi|258511668|ref|YP_003185102.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478394|gb|ACV58713.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 444
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 245/474 (51%), Gaps = 57/474 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GR NVGKS LFNRL+ RR ++V +TP VTRD G ++ + F+V+D+ G
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPG--VTRDRIYGKSEWNGVPFRVIDTGG 60
Query: 180 LET--EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIK 236
+E E G+++ A + + + +F++D R G+ D V + LR+ H P
Sbjct: 61 IEMDEEDEMGNLIRVQAQIAID---EADVILFVVDGRQGVTQADEHVAQVLRRAHKP--- 114
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++ +NK + + S E LGFG+PI SAE G G +L +A+ ++
Sbjct: 115 VVLGVNKLDHVEQHALSY-----EFYRLGFGEPIPFSAEHGQGTGDLLDAVVAALP---- 165
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ E+DE + +++A +GRPNVGKS+L+N LL E+RV+V P A
Sbjct: 166 -----------------KASEEDEDEDAIRIAFIGRPNVGKSSLVNRLLGEERVMVSPVA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD+V E G+T LVDTAG ++ K + SV+++ + L RA V +VLDA
Sbjct: 209 GTTRDAVDTPLERDGQTYMLVDTAGMRRKGKVYERIEKYSVLRALRALDRADVAFVVLDA 268
Query: 416 E----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ A++ G + +VNK D + +A R +E + E P +
Sbjct: 269 QTGIVEQDKRVAGYALDAGCAIAFVVNKWDAIEKDDKTA--HRFEEKIRDE----FPFLR 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKW-CLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
PV+F SAL G+ R++ + V ++ +R+PTS LNR L S + +
Sbjct: 323 FAPVIFVSALTGQ-RVSRLLDVAKEIAEYHAMRVPTSTLNRVLADAQVSVSPPSKGGRRL 381
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+I Y TQV +PPTFV F++ + + R+L L+E F G PIRI R+
Sbjct: 382 RIYYGTQVSVKPPTFVIFVNDTELSHFSYERYLENQLREAFGFRGTPIRIVLRA 435
>gi|436841724|ref|YP_007326102.1| GTPase Der [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432170630|emb|CCO24001.1| GTPase Der [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 450
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 249/482 (51%), Gaps = 58/482 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT+ ++GRPNVGKS LFNRL+R++ AL ++ P +TRD +++ ++D+
Sbjct: 1 MLPTIALVGRPNVGKSTLFNRLLRKKRALTHDMPG--ITRDRIYAEGHFEGVQYALIDTG 58
Query: 179 GL------ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA 232
GL ++E G I ++ + + I ++D R+GL PLD +V ++R+
Sbjct: 59 GLVMESDNDSEEFQGDIFEQAR----EAIEEAHALILVVDGRAGLTPLDEQVAAYIRQSN 114
Query: 233 PQIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
KPI V +NK +G+ A A +E LGF + + +SAE G + L E +
Sbjct: 115 ---KPILVLVNKV----DGSELEAPALSEFHCLGF-EVMPVSAEHGYNLMALREKVAQMA 166
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED L+ EDDE+K L++A++GRPN GKS+++NAL E+RV+
Sbjct: 167 EDTGLK----------------PEEEDDEAK-GLKIAMLGRPNAGKSSMVNALTGEERVI 209
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVA 410
V AG TRDSV V FE G+ VDTAG +R KG SV+++ K+ +A V
Sbjct: 210 VSDIAGTTRDSVDVTFESGGKIFTFVDTAGVRRRTNIKGSIERFSVIRALKSSSKADVTV 269
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V+DA ++ R ++E ++ VNK+DL+S + + L + A
Sbjct: 270 MVIDAMGGLAKQDKRLLDFLIKEATPFIIAVNKIDLVSKAERAELRAGFERA-------- 321
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-Q 519
+ +PV++TS + G ++ ++ LR+ T +LNR ++ V+ +H +
Sbjct: 322 LRFANHVPVIYTSCISKSGLGGILPLAAKLKKECSLRVSTGQLNRIMKDVIEKHQPPIVK 381
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+ K KY TQ PPTFV F++ ++ + RFL L++ ++ P+ I RS
Sbjct: 382 RRRAKFKYLTQADDEPPTFVFFINDERLIKPTYHRFLENKLRKILNVKIAPLNIVFRSTF 441
Query: 580 RK 581
RK
Sbjct: 442 RK 443
>gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
Length = 448
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 234/475 (49%), Gaps = 53/475 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS FNRL+ R A+V + P TRD G F ++D+ GL
Sbjct: 5 PIVAIVGRPNVGKSTFFNRLLGERAAIVQDEP--GTTRDRLYGEVSWRGRTFTIVDTGGL 62
Query: 181 ETEATSGS-----ILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
ET S S I + + +FMIDV++G P D E+ LR+
Sbjct: 63 ETSVDSSSDEPDPIRRMVREQAEQAIREADLIVFMIDVKTGPTPSDYEIADLLRRTN--- 119
Query: 236 KP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP I+A+NK +S A E LG GDPI +SA G+G+T L D
Sbjct: 120 KPTILAVNKADSPQREY-----EAVEFYSLGMGDPIPVSAYHGMGITPLL--------DR 166
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
++ +L + T V +++AIVGRPNVGKS LLNA+L ++R +V
Sbjct: 167 VVELLPPEEEEEEEETGPV-----------VRIAIVGRPNVGKSRLLNAILGQERAIVSD 215
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD V ++ + + L+DTAG +R K E G SV ++ + + R+ VV L++
Sbjct: 216 VPGTTRDPVDTEIQWGDQRIVLIDTAGIRRRGKVESGIEQYSVFRTLRAIGRSDVVLLLI 275
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E +EE +GLV++VNK DL+ +N+A E V ++ +P
Sbjct: 276 DAQEGLTAQDEHIAGYVLEEYKGLVLVVNKWDLVEKDENTA-----NEYVAH-LRERMPF 329
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ- 522
V PV F SA +G ++ + ++ R+ T+ LNR LR + H + +
Sbjct: 330 VDWAPVRFISAKYSQGIPGLVETALKIARERERRITTAALNRLLRDAVAAHQPPSKPGKW 389
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K Y TQ +PPTFV F++ K + R+L ++E + G PIR+ RS
Sbjct: 390 LKFYYVTQADVKPPTFVFFVNDPKQVQFGYKRYLENRIREAYGFEGTPIRMYFRS 444
>gi|373954476|ref|ZP_09614436.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
gi|373891076|gb|EHQ26973.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
Length = 433
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 239/479 (49%), Gaps = 77/479 (16%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
V I+GRPNVGKS LFNRLI R+A+V DD VTRD G+++ F V+D+ G
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEARKAIV----DDFSGVTRDRHYGVSEWTGHDFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
A S + + A + V+ + A +FM+DV +G+ LD E+ +LRK KP
Sbjct: 61 V--ANSDDVFE--AAIREQVIIAIEEASVILFMVDVTTGITDLDDEIATFLRKSK---KP 113
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ V NK ++ S +A G GD ISA TG G EL + + + ED L
Sbjct: 114 VFVVSNKVDN-----NSQQVESATFYGFGLGDIYNISAMTGSGTGELLDEVVKTFEDVPL 168
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+++ LP + I GRPNVGKS+++N LL DR +V P A
Sbjct: 169 ----------------------EQNTLP-KYTIAGRPNVGKSSIINTLLGHDRNIVTPIA 205
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA 415
G TRDS+ +H+ G L+DTAG ++ K K SVM++ K + + VV L++DA
Sbjct: 206 GTTRDSIHIHYNQFGHDFMLIDTAGMRKKTKVKENIEFYSVMRTIKAIEESDVVILMIDA 265
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A + +G+V++VNK DL+ +N+ K ++ + Q+ I T
Sbjct: 266 VEGIEAQDVNIFHLAEKNKKGIVIVVNKWDLI--EKNNKTTKVFEDLIHQK----IAPFT 319
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-- 523
+P+VFTS LE + + Y+ ++PTS+LN + ++ +S P
Sbjct: 320 DVPIVFTSVLEKQRIFKAIEAANKVYENRNKKIPTSKLNDVMLPII-------ESFPPPA 372
Query: 524 ------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KIKY TQ+ P F F + + + + +RF+ L+E+FD G+PI+I R
Sbjct: 373 IKGKYVKIKYVTQISGIAPMFAFFCNLPQYIKEPYMRFIENKLRENFDFQGVPIQIFFR 431
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLD 176
N LP I GRPNVGKS++ N L+ +V TP TRD I + G F ++D
Sbjct: 171 NTLPKYTIAGRPNVGKSSIINTLLGHDRNIV--TPIAGTTRDSIHIHYNQFGH-DFMLID 227
Query: 177 SAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+AG+ + ++ + M T + ++ I MID G+ D+ + K+ I
Sbjct: 228 TAGMRKKTKVKENIEFYSVMRTIKAIEESDVVILMIDAVEGIEAQDVNIFHLAEKNKKGI 287
Query: 236 KPIVAMNKCE 245
++ +NK +
Sbjct: 288 --VIVVNKWD 295
>gi|427414339|ref|ZP_18904529.1| ribosome-associated GTPase EngA [Veillonella ratti ACS-216-V-Col6b]
gi|425714715|gb|EKU77718.1| ribosome-associated GTPase EngA [Veillonella ratti ACS-216-V-Col6b]
Length = 444
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 245/471 (52%), Gaps = 53/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E ++ + + A + + + +F++D + G+ P D EV LR KP++
Sbjct: 62 EFITADSHVIPKMMRLQAQLAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPVL 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQ-----EANIYEFYNLGIGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D S Q ED+E + +A++GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDVVKHFPDSAQ----AEDEEDTI--HVALIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + G+ L+DTAG ++ K P S+++S +++ RA +V LVLD
Sbjct: 213 TRDSIDTHWNHDGQKFVLIDTAGMRRKAKIDAPVERYSIVRSLRSVDRADIVVLVLDGVD 272
Query: 416 ---EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + + E G+G++++VNK DL+ + + R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAHEAGKGIIIVVNKWDLVEKDDKTTI--RYTEDIYDEMGF----LRYA 326
Query: 468 PVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PKI 525
P++F SAL + RI + +I ++ +R+ TS LN+ L + +S + PKI
Sbjct: 327 PILFASALT-KQRIHRLADLIKFVSEQQHMRISTSVLNQVLSDAQNVNPVPSRSGRLPKI 385
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R
Sbjct: 386 YYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLILR 436
>gi|269797893|ref|YP_003311793.1| small GTP-binding protein [Veillonella parvula DSM 2008]
gi|269094522|gb|ACZ24513.1| small GTP-binding protein [Veillonella parvula DSM 2008]
Length = 444
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 248/476 (52%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KPIV
Sbjct: 62 EFITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPIV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +A++GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ ++G+ L+DTAG ++ K E+ S+++S +++ RA +V LVLDA++
Sbjct: 213 TRDSIDTYWTHEGQKFVLIDTAGMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G+V++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVVIVVNKWDLVKKDDKTTL--RFTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|161485612|ref|YP_386558.2| GTP-binding protein Der [Desulfovibrio alaskensis G20]
gi|342906261|gb|ABB36863.2| GTP-binding protein engA [Desulfovibrio alaskensis G20]
Length = 455
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 245/485 (50%), Gaps = 66/485 (13%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + +IGRPNVGKS LFNRLIR A+ ++ P VTRD EG K+GD +F ++D+
Sbjct: 1 MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPG--VTRDRMEGYVKVGDRKFIIIDTG 58
Query: 179 G--LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLR 229
G L+ A D G A +L +T+ AI ++D R GL P D + ++R
Sbjct: 59 GITLDEHAAVAEGPDELRGFEAEILRQTEEAIADSVALCLVVDGREGLTPFDESLAAYVR 118
Query: 230 KHAPQIKPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMT----ELY 284
K KP++ A+NK +G AE LGF I +S G + EL+
Sbjct: 119 KSG---KPVLLAVNKV----DGEEMADLYMAEFHTLGF-PVIPLSGAHGFNVRAFSGELF 170
Query: 285 EALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 344
+ L P ED +P+++E + PL+LA++GRPN GKS+L+NAL
Sbjct: 171 DLLPPEDED---------------------APQEEEER-PLKLAMLGRPNAGKSSLVNAL 208
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNL 403
R++V AG TRDSV + E GR VDTAG +R K + P SV S K+
Sbjct: 209 SGSRRMIVSDVAGTTRDSVDIAVELGGRRYVFVDTAGVRRRAKIQDPVERYSVNSSLKST 268
Query: 404 MRAHVVALVLDAEEVRAVEEGR----------GLVVIVNKMDLLSGRQNSALYKRVKEAV 453
+A V +VLDA E ++ R ++++NK+DL+ +AL + +A
Sbjct: 269 TKADVTLVVLDAVEGLTQQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTALKRLYDDA- 327
Query: 454 PQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
+ +P+++ SA GRG ++ ++ +R+ T LNR L + + R
Sbjct: 328 -------LTFCKHVPIMYISARSGRGVDKLLPMARKINKECYVRVGTGLLNRTLTEAVTR 380
Query: 514 HSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H + +PK Y TQ + PPTFV F++ + + ++ R+L K +++ F++ P+R
Sbjct: 381 HQPPVVKRVRPKFFYLTQAETNPPTFVFFVNDHERIQESYARYLEKFMRKRFEIEHAPMR 440
Query: 573 ITQRS 577
+ RS
Sbjct: 441 VRFRS 445
>gi|403380787|ref|ZP_10922844.1| GTP-binding protein Der [Paenibacillus sp. JC66]
Length = 440
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 239/469 (50%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS +FNRLI R A+V + P VTRD G + D F V+D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRLIGDRLAIVEDKP--GVTRDRLYGTGEWLDTTFNVIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + I+ + + IFM+D ++GL P D E+G+ L + KPIV
Sbjct: 62 EIDGED-EIIKSVKVQAELAIEEADVIIFMVDGKAGLTPADEEIGQLLFRSG---KPIVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ A E LGFGDPI IS G+G+ +L +A
Sbjct: 118 AVNKVDNPQR-----AEMIYEFYSLGFGDPIPISGSHGIGIGDLLDAAL----------- 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ C ++ +D+ + +++A++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 162 -EKCPPDD---------QDEYGEEVIKVALIGRPNVGKSSLVNAILGEERVIVSGVAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE G+ L+DTAG +R K + SVM++ K + RA VV +V++ EE
Sbjct: 212 RDAIDTPFERDGQDFVLIDTAGMRKRGKVYENTEKYSVMRAMKAIERADVVLIVINGEEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ V+IVNK D + + + L + Q I+ ++ P
Sbjct: 272 IIEQDKHIAGYAHEAGKACVLIVNKWDAVE-KDDKTL-----QQFTQSIRDHFLFMSYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
++F SA + ++ V+ + +R+ T LN + + + D+ + +I Y
Sbjct: 326 ILFVSAKTKQRLHKLLPLVVQVAENHAMRVTTHLLNDIIMDAVAINPPPTDKGRRLRINY 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTF+ F++ + + + R+L ++ F+ G P+RI R
Sbjct: 386 VTQVAVKPPTFILFVNSPELMHFSYERYLENKIRGAFNFEGTPLRIMTR 434
>gi|359798964|ref|ZP_09301533.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
gi|359363102|gb|EHK64830.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
Length = 450
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 234/473 (49%), Gaps = 44/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD+ F +D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADYSG--LTRDRHYGEGRVGDIPFIAID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + L A +E LG G P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGM-----GLGPAISEFHELGLGQPYPISAAHGDGIVDLIEL---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D D ++LAIVGRPNVGKSTL+N + E+RV+
Sbjct: 162 -ALKDLAEPPAEEEPAEEGEHDHR----IKLAIVGRPNVGKSTLINTFMGEERVIAFDMP 216
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 217 GTTRDAIEIDFERDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 276
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ E+ +E GR +VV VNK D L G + KE + +E + ++
Sbjct: 277 QTEISEQDAHIAGFVLETGRAVVVAVNKWDGLDGEE--------KERIEREFNRKLRFLS 328
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
V SAL G+G ++ + + +L T +L R L+ + + + +PK
Sbjct: 329 FARVHTISALRGQGIKPLLKSINSAHAAAFAKLSTPKLTRELQAAVEQQPPPRKGIFRPK 388
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 389 MRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLETRFRNAFDLQGTPLRIEFKS 441
>gi|85860147|ref|YP_462349.1| GTP-binding protein EngA [Syntrophus aciditrophicus SB]
gi|85723238|gb|ABC78181.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 447
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 244/477 (51%), Gaps = 51/477 (10%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL ++ +A+V + P TRD R+ ++D+ G E
Sbjct: 7 VAIVGRPNVGKSTLFNRLSQKSKAIVIDVPG--ATRDRNYADCTWHGRRYTLIDTGGFE- 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
A++ +IL + T + + IF++D R GL P D+E+ + LR+ ++ A+N
Sbjct: 64 PASTETILIQMREQTHLAIEEADIIIFLMDGRDGLTPADIEIVQLLREGGKKV--FYAVN 121
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K + + G E LG ISA+ GLG+ EL E L +
Sbjct: 122 KVDGPRH-----EGLLPEFYRLGVSRIHDISAQHGLGIDELMEDL-------------SA 163
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
C +++ E+D +++A++G+PNVGKS+LLN +L +R + P G TRD+
Sbjct: 164 CLPEEAASAGEEGEEEDR----IRIALIGKPNVGKSSLLNKILGYERTIANPTPGTTRDA 219
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ FE+ G L+DTAG R+K + SL SV+Q+ K L R + L++DAEE
Sbjct: 220 IDTPFEFDGHRYLLIDTAGI--RKKSRISLSLEKYSVIQALKTLDRCDIALLLIDAEEGI 277
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E+GR ++++VNK DL++ + NS + + V+ +I+ + + P+
Sbjct: 278 TDQDTKIAGLAFEKGRAVIIVVNKWDLVA-KDNSTVGRYVR-----DIKDRLKFMDFSPI 331
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKY 527
+F SAL G+ + V + Y+++ R+ T LNR + +++ ++ Q A P Y
Sbjct: 332 IFVSALSGQRVTRIFALVQEVYRQYTTRISTGELNRKVMEIVSKNPPPQYQQKAHP-FNY 390
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS 584
TQV +PPTF F+ + + R+L SL+E +PIR+ R R GS
Sbjct: 391 VTQVSIKPPTFAFFVGKPAEIHFSYERYLINSLREALGFTTVPIRLVFRRKHRNIGS 447
>gi|434392243|ref|YP_007127190.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
gi|428264084|gb|AFZ30030.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
Length = 452
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 233/474 (49%), Gaps = 56/474 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL ++A+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGAQDAIVYDEPG--VTRDRTYSNAYWRDREFVVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + + L + LA+ AIF++D ++G P D + +WLR+ + +V
Sbjct: 61 LVFDDDT-EFLPLIREQASLALAEAVAAIFVVDGQTGPTPADEAIAEWLRQQP--VPVLV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR---PSVEDYML 296
A+NKCES G AA+ LG G+P +S G G EL + L P V +
Sbjct: 118 AVNKCESPDQGLAQ----AAQFWELGLGEPYPVSGIHGSGTGELLDQLITFIPPVSEL-- 171
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
PE DE +++AIVGRPNVGKS+LLNA + R +V P +
Sbjct: 172 -------------------PETDE----IKVAIVGRPNVGKSSLLNAFVGTQRAIVSPIS 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ E +G+ L+DTAG +++ E GP + ++ K + RA VV LV+DA
Sbjct: 209 GTTRDSIDTVIEREGKVYRLIDTAGIRKKKNVEYGPEFFGINRAFKAIRRADVVLLVIDA 268
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ R VEEGR V++VNK D + + + +Y K + + V
Sbjct: 269 LDGVTEQDQKLVGRIVEEGRACVIVVNKWDAIE-KDSYTIYDYEKHT-----KERLHFVD 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA G+ ++ V+ + R+ TS +N L + + HS Q Q
Sbjct: 323 WAEMIFVSAKTGQRVEKILELVMQAAEAHKRRVSTSVINEILEEAVRWHSPPTTRQGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI Y TQV +PP+ F++ + + R++ + ++ G PIR+ RS
Sbjct: 383 KIYYGTQVSTQPPSIALFVNEAERFNTNYRRYIERQFRQQLGFNGTPIRLLWRS 436
>gi|193212091|ref|YP_001998044.1| GTP-binding protein EngA [Chlorobaculum parvum NCIB 8327]
gi|238692612|sp|B3QLF4.1|DER_CHLP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193085568|gb|ACF10844.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 438
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 250/469 (53%), Gaps = 58/469 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR++R++ A+V TP VTRD + +F ++D+ G
Sbjct: 3 PLIALVGRPNVGKSTLFNRILRQKSAIVDPTP--GVTRDRHINPGEWQGKQFLLMDTGGY 60
Query: 181 --ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
E ++ S ++LD+T A+ A IFM+D RSGL LDL++ K L++ K
Sbjct: 61 APENDSLSVAMLDQTMRAIADADA----IIFMVDARSGLTYLDLDIAKILKQTFSDKKIF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ++ LA AA + GF +P ISA G G+ ++ D +L
Sbjct: 117 FAINKVDN-----PQLALEAAAMVRSGFTEPYLISARDGGGVADML--------DDILET 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L C ++ D S ++LA++GRPNVGKS+L+NALL DR +V G
Sbjct: 164 L--PCPESEDEELDDDS---------IKLAVLGRPNVGKSSLVNALLGTDRQIVSDVPGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ + G+ L+DTAG +R K + G S +++ + + R V ++LDA
Sbjct: 213 TRDAIDSVLKRNGKEYILIDTAGLRKRTKIDPGIEYYSSLRTERAIERCQVALVLLDAQL 272
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++++ A+E +G++++VNK DL+ ++S K+ + + ++ + I
Sbjct: 273 GLESQDMKIIHMAIERKKGVLILVNKWDLVE--KDSKTSKKFTDNLMMQLG----NIGYI 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCL----RLPTSRLNRWLRKVMG-RHSWKDQSAQ 522
P++FTSAL + ++ IDT + + ++ TS LNR+L++ + RH +
Sbjct: 327 PIIFTSALTKKN----CYRAIDTAAQIAINRRQKISTSNLNRFLQEALAMRHPASKSGKE 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
KIKY TQ++A P F F + + L + RFL K L+E FD G+PI
Sbjct: 383 LKIKYMTQIEAGHPVFAFFCNDPQLLENNFKRFLEKRLRESFDFEGLPI 431
>gi|416389579|ref|ZP_11685375.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
gi|357264204|gb|EHJ13122.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
Length = 465
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 246/482 (51%), Gaps = 62/482 (12%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
++ I LP V IIGRPNVGKS NRL + R+A+V++ P +TRD A D F+
Sbjct: 10 RLTIMALPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEP--GITRDRTYRPAFWADRDFQ 67
Query: 174 VLDSAGL----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLR 229
V+D+ GL ETE L R M A L + AIF++D + GL D E+ WLR
Sbjct: 68 VVDTGGLVFDDETEFLP---LIREQAMAA--LTEASVAIFVVDGQLGLTAGDSEIADWLR 122
Query: 230 KHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP 289
+ ++ ++A+NKCES G AAE LG G+P +S G G EL + L
Sbjct: 123 QQ--EVPVLLAVNKCESPDQGLIQ----AAEFWELGLGEPYPVSGIHGNGTGELLDEL-- 174
Query: 290 SVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ SP++ + + ++I+GRPNVGKS+LLNA L E R
Sbjct: 175 --------------------ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGEKR 214
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAH 407
+V P +G TRD++ E +T L+DTAG ++R+K G S+ ++ K + RA
Sbjct: 215 AIVSPISGTTRDAIDTVVERGEKTYRLIDTAG-IRRKKNVNYGAEFFSINRAFKAIRRAD 273
Query: 408 VVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E R ++EGR +++VNK D + + + +Y+ K ++
Sbjct: 274 VVLLVIDAIEGVTDQDIKLADRIIDEGRAAIIVVNKWDAID-KDSYTIYEYKK-----KV 327
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDT-YQKWCLRLPTSRLNRWLRKVMGRHS- 515
+ + + ++F SA+ G+ R+ + +++D ++ R+ TS +N L + HS
Sbjct: 328 MSRLYFMEWADLIFVSAMSGK-RVEKIFKLVDVAVEEHRRRVSTSVVNEVLEEAAKWHSP 386
Query: 516 -WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
Q Q +I Y TQV ++PPT F++ K +D R++ + +E G PIR+
Sbjct: 387 PTTRQGKQGRIYYGTQVSSQPPTIALFVNDPKRFNDNYRRYIERQFREQIGFLGTPIRLF 446
Query: 575 QR 576
R
Sbjct: 447 WR 448
>gi|115377683|ref|ZP_01464876.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|310821559|ref|YP_003953917.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|115365289|gb|EAU64331.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|309394631|gb|ADO72090.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
Length = 462
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 239/471 (50%), Gaps = 43/471 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL RR ALV + P VTRD A+ GD F ++D+ G
Sbjct: 3 PLVAIVGRPNVGKSTLFNRLAGRRLALVEDEPG--VTRDRHYADAQWGDRAFTLIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
S+L + + + +F+ D R+GL D V LRK + +VA
Sbjct: 61 -VPGEKDSLLKQVREQAQLAVEECDVILFVTDGRAGLTSADEAVAGLLRKSGKPV--VVA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK L N + S+ + E +G G+ + +SAE LG+ +L EA VL+
Sbjct: 118 ANK---LDNASDSMQALSGEFFRMGLGEVMPLSAEHALGVPQLVEA-----------VLD 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ +D + DD + L++AI+GRPNVGKST++NA+L+E RV+ G TR
Sbjct: 164 RLPPKQEG--EDAEALPDDGT---LRVAIIGRPNVGKSTMVNAILKEKRVVASEVPGTTR 218
Query: 361 DSVRVHFEYQGRTVYLVDTAGW-LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D + Y+G + L DTAG +R SV+ + K + R+ V L++DA E
Sbjct: 219 DPIDSALTYKGHKLILTDTAGIRRKRSIAHRVEQFSVVSALKVMDRSDVAVLLMDATEPA 278
Query: 420 ----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A ++GR LV++VNK DL+ Q R +EA + ++ + V P+
Sbjct: 279 VDQDAKLAGLAEDKGRALVIVVNKWDLIGTDQ------RRQEAYREALKHSLKFVGYAPI 332
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
+FTSAL G V+ ++ +++ R PT +LNR L ++ + + +P ++ Y
Sbjct: 333 IFTSALTGSKVEKVVDIAVELAEQFRYRAPTPQLNRLLEHMVDSNPAPIVAGKPLRLYYI 392
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
QV PPTF + + + D R++T L++ FDL +P+R+ R+ P
Sbjct: 393 AQVGTAPPTFALTCNYPERVPDMYKRYITNQLRKTFDL-RVPLRLLFRARP 442
>gi|239815182|ref|YP_002944092.1| GTP-binding protein EngA [Variovorax paradoxus S110]
gi|259645888|sp|C5CXH0.1|DER_VARPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|239801759|gb|ACS18826.1| small GTP-binding protein [Variovorax paradoxus S110]
Length = 447
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 239/471 (50%), Gaps = 50/471 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL + R+A+V + +TRD G +LG F V+D+ G
Sbjct: 3 PVVALVGRPNVGKSTLFNRLTQTRDAIVADFAG--LTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A SG I A T +A+ IF++D R GL D ++ LR+ KP ++
Sbjct: 61 EPDAGSG-IYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLG---KPCVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRV 298
A NK E +H+GT + LGFGD +SA G GM +L E AL P
Sbjct: 117 AANKAEGMHDGT-----KLVDFYELGFGDVHGVSAAHGQGMRDLVELALAP--------- 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
LN + + DV P ++LA+ GRPNVGKSTL+N L E+R++ G
Sbjct: 163 LNLPDPDDEADEDDVNKP--------IKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGT 214
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V FE G+ L+DTAG ++ K + SV+++ + + A VV L+LDA +
Sbjct: 215 TRDAISVPFERNGQRFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIESASVVLLLLDATQ 274
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR +V+ +NK D + Q +E + ++I+T +P +
Sbjct: 275 GVTDQDAHIAGYILESGRAVVIAINKWDAVDSYQ--------REQIQRQIETRLPFLKFA 326
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIK 526
+ F SA++ +G V + ++ ++ T L R L + + S K +PK++
Sbjct: 327 SLHFISAIKRQGLGPVWQAIAQAHKSATRKMSTPVLTRLLLEAVQFQSPKRAGMFRPKLR 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP + + + +++A RFL +++FDL G P+RI +S
Sbjct: 387 YAHQGGMNPPVIIIHGNSLEHVTEAYKRFLEGRFRKEFDLVGTPLRIQFKS 437
>gi|206579507|ref|YP_002237139.1| GTP-binding protein EngA [Klebsiella pneumoniae 342]
gi|206568565|gb|ACI10341.1| GTP-binding protein EngA [Klebsiella pneumoniae 342]
Length = 498
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 239/489 (48%), Gaps = 62/489 (12%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 5 FNMIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICID 62
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D+ + K LR K
Sbjct: 63 TGGID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSRE---K 117
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + + + A A+ LG GD I+A G G+T L E AL P V++
Sbjct: 118 PTFLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEI 172
Query: 295 MLRVLNDS---------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNA 343
+ D QN + ++ PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 173 SPQEEVDEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKN 402
+L EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ +
Sbjct: 230 ILGEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQA 289
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 290 IEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQ 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + V F SAL G G + V + Y R+ T+ L R +
Sbjct: 342 VKETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAE 401
Query: 513 RHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDF 564
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 402 DH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSL 454
Query: 565 DLGGIPIRI 573
D+ G PIRI
Sbjct: 455 DVMGTPIRI 463
>gi|416998755|ref|ZP_11939424.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
gi|333976908|gb|EGL77767.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
Length = 444
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 248/476 (52%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +A++GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ ++G+ L+DTAG ++ K E+ S+++S +++ RA +V LVLDA++
Sbjct: 213 TRDSIDTYWTHEGQKFVLIDTAGMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G+V++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVVIVVNKWDLVEKDDKTTL--RFTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|221632763|ref|YP_002521985.1| GTP-binding protein EngA [Thermomicrobium roseum DSM 5159]
gi|254783175|sp|B9KZ43.1|DER_THERP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221155859|gb|ACM04986.1| ribosome-associated GTPase EngA [Thermomicrobium roseum DSM 5159]
Length = 460
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 238/481 (49%), Gaps = 52/481 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS LFNRL+R+R A+V P TRD G+ + DLRF + D+ G
Sbjct: 3 LPQVAIVGRPNVGKSTLFNRLLRQRRAIVEEVPG--TTRDRIYGIVEWNDLRFGLFDTGG 60
Query: 180 LETEATSGS-----ILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQ 234
L TE +++ T +A+ IF++D +G D EV +LR+
Sbjct: 61 LLTEEEIERSSERELVEATKAQAELAIAEADLVIFVVDASAGPTAGDWEVADFLRRTD-- 118
Query: 235 IKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
KPI+ + NK ES +L + LG GDPI +SA G G+ +L +A+ +
Sbjct: 119 -KPILLVANKAESREREFNAL-----QFYELGLGDPIPVSALHGRGIADLLDAIAERL-- 170
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ T + +P ++AIVGRPNVGKS LLNA+L + R +V
Sbjct: 171 ---------PRREEDGTAEAEAP---------KIAIVGRPNVGKSALLNAILGQPRQIVS 212
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
P G TRD+V ++G+ + L+DTAG + + E+G S++++ + + R+ V LV
Sbjct: 213 PIPGTTRDAVDTELVWKGQPIVLIDTAGIRRPGRIERGIERYSILRAERAIERSDVAILV 272
Query: 413 LDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+DA E + ++ +G+VV +NK DL + +EA ++ +
Sbjct: 273 VDATEPFTHQDQAVAGKVLDAKKGIVVAINKWDLFEHMEGEG----AREAFEEDAREAFH 328
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
+ P+VF SAL G+ V+ + + R+PT+ LN+ LR+ + H + +
Sbjct: 329 FMPWAPLVFVSALTGKNVEHVVDLALVVVAERSRRIPTAELNQLLREAIAHHPPPTRPGK 388
Query: 523 -PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
K Y TQ + PPTFV F + + + + R+L ++E + G PI + R R
Sbjct: 389 WVKFYYVTQPEVNPPTFVFFCNRPQLVHFSYKRYLENRIRERYGFLGTPIELVFRERERS 448
Query: 582 C 582
Sbjct: 449 A 449
>gi|374301194|ref|YP_005052833.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay]
gi|332554130|gb|EGJ51174.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay]
Length = 443
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 232/466 (49%), Gaps = 51/466 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+RR A+ ++ P VTRD LG + +D+ GLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLLRREAAITHDRPG--VTRDRIYAETDLGGRKVAFVDTGGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-A 240
E I + ++ + ++D R GL LD V ++R KP++ A
Sbjct: 62 MEEQVEDIQAAIFAQAREAVKESHGILLVMDGREGLTALDERVAAFIRTSN---KPVLLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPI-AISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK + N LA G G P+ A+SA G G+T LR + D++L
Sbjct: 119 VNKIDGSENADLMLAE------FHGLGFPLLAVSASHGHGIT----TLREQIADFLL--- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
DV ED ++ L++A +G+PN GKS+L+N+L DRV+V P AG T
Sbjct: 166 -----------ADVPEEEDLTAEQGLRIAFLGKPNAGKSSLVNSLTGSDRVIVSPVAGTT 214
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RDSV V FE +G+ VDTAG +R K E SV+++ K +A + LVLDA+
Sbjct: 215 RDSVDVTFEVEGKRYTFVDTAGVRKRTKIEDNLEQFSVLRALKASKKAQITVLVLDAQAG 274
Query: 419 RAVEEGRGL----------VVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
++ + L + ++NKMDL+ + K +E +E+ + P
Sbjct: 275 MTTQDKKLLSFLEKEKTPFIAVINKMDLVPRDER----KVAREHYKKELSI----ASYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIKY 527
V FTSA+ G G ++ ++ +R+ T LNR LR +G+H + + K Y
Sbjct: 327 VTFTSAMTGVGVAELLPMAERLLEECRIRIGTGALNRALRAALGKHQPPVVKRRRAKFYY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQV+ PPTFV F++ + + + R+L SL++ + P+R+
Sbjct: 387 LTQVETEPPTFVFFVNDPELIKPSYARYLENSLRKLLGITMAPVRV 432
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N LL+ + + G+TRD + + GR V VDT G
Sbjct: 1 MPATVAIIGRPNVGKSTLFNRLLRREAAITHDRPGVTRDRIYAETDLGGRKVAFVDTGGL 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE-VRAVEE---------GRGLVVIVN 432
E+ + + Q+R+ + +H + LV+D E + A++E + +++ VN
Sbjct: 61 EMEEQVEDIQAAIFAQAREAVKESHGILLVMDGREGLTALDERVAAFIRTSNKPVLLAVN 120
Query: 433 KMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVID 489
K+D G +N+ L + E + G P++ SA G G + Q+ D
Sbjct: 121 KID---GSENADL-------MLAEFHGL-----GFPLLAVSASHGHGITTLREQIAD 162
>gi|428174587|gb|EKX43482.1| hypothetical protein GUITHDRAFT_163859 [Guillardia theta CCMP2712]
Length = 507
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 255/511 (49%), Gaps = 81/511 (15%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL-- 180
V IIGRPNVGKS+LFNRLI R+ ALVYN P VTRD A+ G F+V+D+AGL
Sbjct: 12 VAIIGRPNVGKSSLFNRLIGRQHALVYNKPG--VTRDCLFEKAEYGGFTFEVVDTAGLDD 69
Query: 181 -----ETEA----------TSG------SILDRTAGMTANVLAKTQFAIFMIDVRSGLHP 219
E EA SG +L T+ V+ + +FM+D R GL P
Sbjct: 70 GVDMQEDEAEMRKAGPQMKASGIGRWPAHLLTEALENTSLVVKSSDLVLFMVDQRVGLTP 129
Query: 220 LDLEVGKWLRKHAPQIKPIVAM-NKCES----LHNGTGSLAGAAAESL-MLGFGDPIAIS 273
LD + +WL A + KP + + NK + L +++ + + LG G+P+ IS
Sbjct: 130 LDWQFARWL---AMKNKPTLLISNKADGNVSPLDENLANISVTGMKDVKKLGLGEPLHIS 186
Query: 274 AETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRP 333
A GM+EL + P + + + +++ E + L+L I+GRP
Sbjct: 187 ATQNEGMSELIMHMAPIIMGV------------DRKNRQISTEWKSEEERRLRLLILGRP 234
Query: 334 NVGKSTLLNALLQ-------EDRV--LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
NVGKSTL+NAL++ ED V LVGPE G+TRD V V FE+QG+ + ++DTAG +
Sbjct: 235 NVGKSTLVNALVETQADEKKEDFVPLLVGPEPGITRDPVSVIFEHQGQQIEVIDTAGLRK 294
Query: 385 REK--EKGPA--SLSVMQSRKNLMRAHVVALVLDAEE-------------VRAVEEGRGL 427
+ K + G A + S K + RA +V L+L+ + ++EG+ +
Sbjct: 295 KGKTMQHGDAIDIKTSYASLKRVPRADLVILLLEINKQTGLLTEQDITLATEVIKEGKAI 354
Query: 428 VVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQV 487
+V VNK D LS + VK++ P+ + Q+ +P VF S+ G +M +
Sbjct: 355 LVAVNKCDTLSKEE----LANVKKSSPRILNMCFNQLGEVPTVFISSQNRLGLKQLMTEA 410
Query: 488 IDTYQKWCLRLPTSRLNRWLRKV--MGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGK 545
I ++K +L T+ L RW+ + +G+ S P +K+ QV +PPT V S
Sbjct: 411 ISLHEKSRTKLSTADLQRWVHDIKRIGKMS---PPTFPNLKFARQVDTKPPTIVLTCSRS 467
Query: 546 KTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ A + +LT + F L G+P+RI R
Sbjct: 468 VRSTTAYMAYLTNDFRRTFGLDGVPLRILLR 498
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+++AI+GRPNVGKS+L N L+ LV + G+TRD + EY G T +VDTAG
Sbjct: 10 MRVAIIGRPNVGKSSLFNRLIGRQHALVYNKPGVTRDCLFEKAEYGGFTFEVVDTAG 66
>gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
Length = 494
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 243/493 (49%), Gaps = 73/493 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + K LRK KP
Sbjct: 59 GID--GTEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAKHLRKLE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+AE LG + I+A G G+T L E AL P E
Sbjct: 114 MLVVNKVDGI-----DADAASAEFWQLGVENMYQIAAAHGRGVTALIELALNPFAE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKL-----------------PLQLAIVGRPNVGKST 339
++L++S +D+T ED+E KL P++LAI+GRPNVGKST
Sbjct: 165 KLLDES----KGELEDLTEFEDEEEKLDYSEEEAEEEFTRLQDQPIKLAIIGRPNVGKST 220
Query: 340 LLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQ 398
L N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV++
Sbjct: 221 LTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVK 280
Query: 399 SRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKR 448
+ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 TLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDMD 332
Query: 449 VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLR 508
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R ++
Sbjct: 333 VKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMK 392
Query: 509 KVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSL 560
H QP K+KY PP V + L D+ R+L
Sbjct: 393 MATEDH-------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVNDLPDSYKRYLMNYF 445
Query: 561 KEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 446 RKSLEIMGTPIRI 458
>gi|424831837|ref|ZP_18256565.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|414709274|emb|CCN30978.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 498
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 240/489 (49%), Gaps = 62/489 (12%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 5 FNMIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICID 62
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D+ + K LR K
Sbjct: 63 TGGID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSRE---K 117
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + + + A A+ LG GD I+A G G+T L E AL P V++
Sbjct: 118 PTFLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEV 172
Query: 295 --MLRVLNDS-------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNA 343
V D+ QN + ++ PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 173 NPQEEVDEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKN 402
+L EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ +
Sbjct: 230 ILGEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQA 289
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 290 IEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQ 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + V F SAL G G + V + Y R+ T+ L R +
Sbjct: 342 VKETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAE 401
Query: 513 RHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDF 564
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 402 DH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSL 454
Query: 565 DLGGIPIRI 573
D+ G PIRI
Sbjct: 455 DVMGTPIRI 463
>gi|119494580|ref|ZP_01624713.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
gi|119452086|gb|EAW33297.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
Length = 453
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 247/481 (51%), Gaps = 62/481 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NRL ++++V++ P +TRD A D F V+D+ G
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLSETQDSIVHDQPG--ITRDRTYRYAYWQDREFSVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A LA+ AIF++D ++GL D + WLR+H+ + +
Sbjct: 61 LIFDDDTEFLPLIREQVMVA--LAEATVAIFVVDGQTGLTGGDEAIASWLREHS--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G + + LG G+P +S+ G G EL + L
Sbjct: 117 LAVNKCESPTTGLIQ----SMQFWELGLGNPFPLSSIHGSGTGELLDEL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + ++ E +++AIVGRPNVGKS+LLNA L E+R +V P +G
Sbjct: 162 -----------IKYIPKADELEESEEIRVAIVGRPNVGKSSLLNAFLGENRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ E G+T LVDTAG ++R+K E G + ++ K + R+++V L++DA
Sbjct: 211 TRDAIDTVVERNGKTYRLVDTAG-IRRKKNVEYGAEFFGINRAFKAIRRSNIVLLIIDAI 269
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVT 465
+ R EEGR V++VNK D++ + L Y+R E++ + +
Sbjct: 270 DRVTEQDLKLANRVSEEGRACVIVVNKWDIIEKDTYTILEYER-------EVKARLYFMD 322
Query: 466 GIPVVFTSALEGR---GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQS 520
+F SA+ G+ I ++ Q + +Q+ R+ T+ +N + + + HS Q
Sbjct: 323 WAKTIFVSAMTGQRVEKIIDLVDQAVAEHQR---RVSTAVINEVIEEAVSWHSPPTTRQG 379
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
Q KI Y TQV ++PPT V F++ K ++ R++ ++ G PIR+ R P
Sbjct: 380 KQGKIYYGTQVSSQPPTLVLFVNDPKRFNENYRRYMESQFRQQLGFLGTPIRLIWRGKPA 439
Query: 581 K 581
+
Sbjct: 440 R 440
>gi|384135333|ref|YP_005518047.1| small GTP-binding protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289418|gb|AEJ43528.1| small GTP-binding protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 444
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 243/474 (51%), Gaps = 57/474 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GR NVGKS LFNRL+ RR ++V +TP VTRD G ++ + F+V+D+ G
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPG--VTRDRIYGKSEWNGVPFRVIDTGG 60
Query: 180 LET--EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
+E E G+++ A + + + +F++D R G+ D V + LR+ KP
Sbjct: 61 IEMDEEDEMGNLIRVQAQIAID---EADVILFVVDGRQGVTQADEHVAQVLRRAR---KP 114
Query: 238 IV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+V +NK + + S E LGFG+PI SAE G G +L +A+ ++
Sbjct: 115 VVLGVNKLDHVQQHALSY-----EFYRLGFGEPIPFSAEHGRGTGDLLDAVVAALP---- 165
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ +DE + +++A +GRPNVGKS+L+N LL E+RV+V P A
Sbjct: 166 -----------------KASGEDEDEDAIRIAFIGRPNVGKSSLVNRLLGEERVMVSPVA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD+V E G+ LVDTAG ++ K + SV+++ + L RA V +VLDA
Sbjct: 209 GTTRDAVDTPLERDGQAYVLVDTAGMRRKGKVYERIEKYSVLRALRALDRADVAFVVLDA 268
Query: 416 E----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A++ G + +VNK D + +A R +E + +E P +
Sbjct: 269 ETGIVEQDKRVAGYALDAGCAIAFVVNKWDAIEKDDKTA--HRFEEKIREE----FPFLR 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKW-CLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
PV+F SAL G+ R+ + V ++ +R+PTS LNR L S + +
Sbjct: 323 FAPVIFVSALTGQ-RVGKLLDVAKELAEYHAMRVPTSTLNRVLADAQVSVSLPSKGGRRL 381
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+I Y TQV +PPTFV F++ + + R+L L+E F G PIRI R+
Sbjct: 382 RIYYGTQVSVKPPTFVIFVNDTELSHFSYERYLENQLREAFGFRGTPIRIVLRA 435
>gi|421482982|ref|ZP_15930561.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
gi|400198786|gb|EJO31743.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
Length = 450
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 235/473 (49%), Gaps = 44/473 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++G++ F +D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSG--LTRDRHYGEGRVGEIPFIAID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A G +L+ A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKDGILLE-MARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + L A +E LG G P ISA G G+ +L E
Sbjct: 117 VLLAVNKAEGM-----GLGPAISEFHELGLGQPYPISAAHGDGIVDLIEL---------- 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L D D ++LAIVGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 -ALKDLAEPPVEEEVFEEGDHDHR----IKLAIVGRPNVGKSTLINTLMGEERVIAFDLP 216
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ + F+ GR L+DTAG +R K + SV+++ + + ++VV L+LDA
Sbjct: 217 GTTRDAIEIDFDRDGRRYTLIDTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDA 276
Query: 416 E-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E+ +E GR +VV +NK D L G + KE + +E Q + ++
Sbjct: 277 HTEISEQDAHIAGFVLETGRAVVVAINKWDGLDGEE--------KERIEREFQRKLRFLS 328
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
+ SAL G+G ++ + + +L T +L R L+ + + + +PK
Sbjct: 329 FARMHTISALRGQGIKPLLKSINSAHAAAFAKLSTPKLTRELQAAIEQQQPPRKGIFRPK 388
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + D+ R+L + FDL G P+RI +S
Sbjct: 389 MRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLETRFRNAFDLAGTPLRIEFKS 441
>gi|163856334|ref|YP_001630632.1| GTP-binding protein EngA [Bordetella petrii DSM 12804]
gi|229710727|sp|A9IK66.1|DER_BORPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163260062|emb|CAP42363.1| putative GTP-binding protein [Bordetella petrii]
Length = 451
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 241/481 (50%), Gaps = 59/481 (12%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
++ P V ++GRPNVGKS LFNRL R R ALV + +TRD G ++GD F V+D
Sbjct: 1 MSFKPVVALVGRPNVGKSTLFNRLTRSRAALVADY--SGLTRDRHYGEGRVGDTPFIVID 58
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E A +G IL A T +A+ +F++D R+G++ D E+ + LRK Q +
Sbjct: 59 TGGFEPVAKTG-ILREMARQTRQAIAEADVVVFLVDARAGVNAHDHEIAQLLRKSGQQ-R 116
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NK E + G G+ A +E LG G P ISA G G+ +L
Sbjct: 117 VVLAVNKAEGM--GVGN---ATSEFHELGLGTPYPISAAHGDGIVDLI------------ 159
Query: 297 RVLNDSCTQNNSSTQDVTSPED----DESKLP----LQLAIVGRPNVGKSTLLNALLQED 348
+ QD+ PE D + LP ++LAIVGRPNVGKSTL+N LL E+
Sbjct: 160 ----------GLALQDLVEPEPEPAPDAADLPPDHRIKLAIVGRPNVGKSTLINTLLGEE 209
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAH 407
RV+ G TRD++ + FE GR L+DTAG +R K + SV+++ + + ++
Sbjct: 210 RVIAFDLPGTTRDAIEIDFERDGRKYTLIDTAGLRRRGKVFEAVEKFSVIKTLQAIEASN 269
Query: 408 VVALVLDAE-EVR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV L+LDA+ EV +E GR +VV +NK D L Q + + +
Sbjct: 270 VVLLMLDAQTEVSEQDAHIAGFVLETGRAVVVAINKWDGLDIDQRERIEREFRRK----- 324
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ ++ P SAL+G+G V+ V+ + +L T +L R L + +
Sbjct: 325 ---LRFLSFAPTHTISALKGQGIKPVLKSVVAAHAAAFAKLSTPKLTRELHAAVEQQPPP 381
Query: 518 DQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ +PK++Y Q PP + + + D+ R+L +E F L G P+RI +
Sbjct: 382 RKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSYRRYLETRFREAFKLDGTPLRIEFK 441
Query: 577 S 577
S
Sbjct: 442 S 442
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 83 ALEDTHVEPEPDGVVE------DHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSAL 136
AL+D VEPEP+ + DH++K + I+GRPNVGKS L
Sbjct: 162 ALQDL-VEPEPEPAPDAADLPPDHRIK-------------------LAIVGRPNVGKSTL 201
Query: 137 FNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGM 196
N L+ + ++ P TRD E + ++ ++D+AGL +++ + +
Sbjct: 202 INTLLGEERVIAFDLPG--TTRDAIEIDFERDGRKYTLIDTAGLRRRGKVFEAVEKFSVI 259
Query: 197 -TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 247
T + + + M+D ++ + D + ++ + + +VA+NK + L
Sbjct: 260 KTLQAIEASNVVLLMLDAQTEVSEQDAHIAGFVLETGRAV--VVAINKWDGL 309
>gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 440
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 249/479 (51%), Gaps = 71/479 (14%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN + ++R ++V + P VTRD A+ F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNFIAKKRVSIVEDLP--GVTRDRIYMDAEWLGREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E E T+ IL T + + IF++D ++G+ D EV LR KP+V
Sbjct: 62 EIE-TTDRILAATRHQAQLAIEEADVIIFVVDGKTGITTADEEVAAMLRSTR---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE---ALRPSVEDYML 296
A+NK +S + A E LG GDPIAISA L + +L + L P ED
Sbjct: 118 AVNKIDSPKD-----EPAVYEFYNLGLGDPIAISATNALSIGDLLDRVIELLPQTED--- 169
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ EDD+ +++A +GRPNVGKS+L+NALL E+RV+V
Sbjct: 170 ------------------AEEDDDV---IKVAFIGRPNVGKSSLVNALLGEERVIVSDIP 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA 415
G TRD++ +FE G L+DTAG ++ + P SV++S + + RA VV +V+DA
Sbjct: 209 GTTRDAIDTYFEKDGTKFILIDTAGMRRKARINQPVERYSVIRSLRAVERADVVLVVIDA 268
Query: 416 -----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E+ + + E GRG++++VNK DL+ +AL R E + E+ +
Sbjct: 269 VDGVTEQDKKIAGYAHEAGRGIIIVVNKWDLIEKDSKTAL--RYTENIRSEMAF----IQ 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVM-------GRHSWK 517
PV+FTSAL + R+ + +++ ++ +R+ TS LN+ + + GR +
Sbjct: 323 YAPVLFTSAL-TKQRVQRISELVKFVAEQHAMRVQTSVLNQVIEDAIRINPPPTGRGT-- 379
Query: 518 DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ KI Y TQ + +PPTF+ F++ + + + LR+L L+E F G P+R+ R
Sbjct: 380 ----RLKIFYTTQAEVKPPTFIFFVNEPEIMHFSYLRYLENKLREAFGFEGTPLRLVVR 434
>gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016]
Length = 511
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 245/497 (49%), Gaps = 71/497 (14%)
Query: 115 IDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKV 174
+++ ++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK+G+ F V
Sbjct: 12 VEVVMIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKVGEHDFIV 69
Query: 175 LDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQ 234
+D+ G++ + + + A + + + +FM+D R+GL P D + LRK +
Sbjct: 70 IDTGGID--GSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRK--IE 125
Query: 235 IKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED 293
++ +NK + + A+A+ LG + I+A G G+T L E AL P ++
Sbjct: 126 KATMLVVNKVDGI-----DADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDN 180
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNV 335
+ T + +D+T+ ED+E++ P++LAI+GRPNV
Sbjct: 181 LL-------STNSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNV 233
Query: 336 GKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASL 394
GKSTL N +L E+RV+V G TRDS+ + E GR L+DTAG +R K +
Sbjct: 234 GKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKF 293
Query: 395 SVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSA 444
SV+++ K + A+VV LV+DA E A+ GR +V+ VNK D
Sbjct: 294 SVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------G 345
Query: 445 LYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLN 504
L VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L
Sbjct: 346 LDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLT 405
Query: 505 RWLRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFL 556
R ++ H QP K+KY PP V + + L D+ R+L
Sbjct: 406 RIMKMATEDH-------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYL 458
Query: 557 TKSLKEDFDLGGIPIRI 573
++ D+ G PIRI
Sbjct: 459 MNYFRKSLDIMGTPIRI 475
>gi|410696432|gb|AFV75500.1| ribosome-associated GTPase EngA [Thermus oshimai JL-2]
Length = 435
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 239/465 (51%), Gaps = 53/465 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+ R+ A+V +TP VTRD++E + + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLVGRKSAVVADTPG--VTRDLKEEVVETDTGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG ++ + L + +F +D R+ L P D EV ++LR+ + +
Sbjct: 60 --WSGDRWEKKIQEKVDRALEEADLVLFAVDGRADLTPADHEVAEYLRRKGKPVLLVATK 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
+ + G L LGFGDPI S+E G+ +L EA+
Sbjct: 118 VDHPTHEHYLGPLYA-------LGFGDPIPTSSEHARGLEDLIEAI-------------- 156
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
Q Q+ + PE ++LAIVGRPN GKS+LLNA+L E+RV+V E G TRD
Sbjct: 157 --WQRLPVRQEESEPE----VAAIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGTTRD 210
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
++ V + G+ L+DTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 211 TIDVPVDIGGQRFILLDTAG-IRKRPETFVEELAIRRSLRAIGEADVVLLVVDPFQVGDR 269
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A+E+G+ +V+++ K DL+ + + + +KE + + +P V+T
Sbjct: 270 ELKLANEALEKGKPVVLVITKWDLVPKEEAQRMRRLLKEK--------LAHLDHLPRVYT 321
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
SAL + + + + ++ R+PTS LNRW+ R + +P KI Y TQ
Sbjct: 322 SALTRQNLERIFQEAVRLHELNHTRIPTSELNRWVGVWTSRVQMPNFKGKPLKILYATQP 381
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 382 EVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLKEVPFRLVFR 426
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N L+ +V G+TRD E LVDT G
Sbjct: 3 RVVIVGRPNVGKSSLFNRLVGRKSAVVADTPGVTRDLKEEVVETDTGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEK 389
W ++ +EK
Sbjct: 63 DRWEKKIQEK 72
>gi|428206730|ref|YP_007091083.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
gi|428008651|gb|AFY87214.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
Length = 452
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 239/484 (49%), Gaps = 53/484 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NRL +EA+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIVGRPNVGKSTLANRLAGVQEAIVYDEPG--VTRDRTYMPAYWCDREFLVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A L++ +F++D ++G P D EV WLR+ + + +
Sbjct: 61 LVFDDDTEFLPLIRQQVMVA--LSEASAVLFVVDGQTGPLPADEEVAAWLRQQS--LPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AA+ LG G+P A+S G G +L + L
Sbjct: 117 LAVNKCESPEQGLMQ----AAQFWELGLGEPYAVSGIHGNGTGDLLDQL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ PE+ + +AIVGRPNVGKS+LLNA + E R +V P +G
Sbjct: 162 -----------IAHLPQPEEITPTNEIAVAIVGRPNVGKSSLLNAFVGESRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ E+QG+T L+DTAG +++ E GP + ++ K + RA VV LV+DA +
Sbjct: 211 TRDSIDTVVEHQGQTYRLIDTAGIRKKKNVEYGPEFFGINRAFKAIRRADVVLLVIDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R VEEGR V++VNK D + + +Y K ++ + +
Sbjct: 271 GVTEQDQKLAGRIVEEGRACVLVVNKWDAIE-KDTYTIYDYEK-----NLRERMQFLDWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+F SA G+ ++ V + R+ T+ +N + + + HS Q Q +I
Sbjct: 325 EAIFVSATTGQRVEKILELVNRAAESHKRRVSTAVVNEVIEEALRWHSPPVTRQGRQGRI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS-VPRKCGS 584
Y TQV +PP F++ K +D R++ + ++ G PIR+ RS R
Sbjct: 385 YYGTQVSVQPPAIALFVNDAKRFNDNYRRYIERQFRQQLGYTGTPIRLFWRSKQARDVEK 444
Query: 585 SSSR 588
SS+R
Sbjct: 445 SSNR 448
>gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8]
gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8]
Length = 484
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 241/489 (49%), Gaps = 47/489 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++PT++++GRPNVGKS LFNRL + R+ALV + P +TRD G + V+D+
Sbjct: 1 MIPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPG--LTRDRHYGRGIGASQPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R G+ P D+E+ LR+ + +
Sbjct: 59 GFEPHTDSG-ILKAMAKQTLQAIDEADAIIFLVDGRQGVSPQDMEIANRLRRSKCPV--L 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NK E + A +A+ LG G P++IS+ G G+ ++ E
Sbjct: 116 LAVNKTEGMQK-----AVVSADFHELGLGYPLSISSAHGEGVRDIVEL------------ 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+N +D + ++P ++AIVGRPNVGKSTL+NALL E+RV+ E G
Sbjct: 159 ----ALENFKEVEDEPVTDYTGDRIP-KVAIVGRPNVGKSTLVNALLGEERVIAYDEPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + E G+ L+DTAG +R + + SV+++ + + A+VV LV+DA+E
Sbjct: 214 TRDSIHIDLEKNGKHYTLIDTAGVRKRGRVFEAIEKFSVIKTIQAIEEANVVILVVDAQE 273
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++ GR LVV +NK D L + ++ + +EI + +
Sbjct: 274 GITEQDAHVAAYILDAGRALVVAINKWD--------GLKEDERDWIKREIDRKLQFLDFA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
+ SAL +G + V Y+ +L T +L R L + +H + +PK++
Sbjct: 326 EFHYISALRKKGLPELFKSVDVAYKAAFAKLATPQLTRVLIDALQQHQPPISKGIRPKLR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y Q + PP V S + DA RFL K+ + F L G P+R+ +
Sbjct: 386 YAHQGGSNPPIVVIHGSHVDGVKDAYTRFLEKTFRRTFQLSGTPLRVEYKQGHNPFAEEE 445
Query: 587 SRQNTGQKV 595
++ G+ +
Sbjct: 446 DKRKPGEGI 454
>gi|194334612|ref|YP_002016472.1| GTP-binding protein EngA [Prosthecochloris aestuarii DSM 271]
gi|238693304|sp|B4S433.1|DER_PROA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|194312430|gb|ACF46825.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 436
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 250/473 (52%), Gaps = 56/473 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNR+ ++ A+V +TP VTRD A+ F V+D+ G
Sbjct: 3 PLVALVGRPNVGKSTLFNRITHQKSAIVDSTP--GVTRDRHIMPAEWIGKEFLVMDTGGY 60
Query: 181 --ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+++ S ++L++T +TA + + IF++DVRSGL LDL++ K L++
Sbjct: 61 CHDSDGISKAMLEQT--LTA--IGEADVIIFLVDVRSGLTYLDLDMAKLLKRDFNDKPVY 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ES LA GF +P ISA G G+ +L +A+ S E+
Sbjct: 117 FAVNKVESPQ-----LAYEGESFRKTGFTEPWFISARDGSGVADLLDAVVDSFEE----- 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
S Q+ E+D+S ++LAI+GRPNVGKS+ +NALL +R +V + G
Sbjct: 167 ---------KSGQE----EEDDS---IRLAIIGRPNVGKSSFVNALLGTNRNIVSNKPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ F+ GR + L+DTAG +R + + G S +++ + + R V +++DAE+
Sbjct: 211 TRDAIDTRFKRNGREIVLIDTAGLRKRARIDAGIEFYSSLRTERAIERCDVALVLIDAEQ 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLS-GRQNSALYKRVKEAVPQEIQTVIPQVTG 466
A E +G++++VNK DL+ + S LY + + +
Sbjct: 271 GLEKQDMKIIEMAAERKKGVLLLVNKWDLIEKDSKTSKLYS-------DRMYDDMGNLGW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
IP+ F SA+ + + +D ++ ++ TS LNR+L+ + + +S + KI
Sbjct: 324 IPIQFISAMTKKNLYRAIDAALDIQEQRSQQITTSDLNRFLQDTLLQAPPSSKSGKELKI 383
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP--IRITQR 576
KY TQ++A P F F + K L + RFL K ++++++L G+P +R Q+
Sbjct: 384 KYMTQIRAPWPVFAFFCNDPKLLQNNYKRFLEKRIRQNYNLSGVPFSLRFMQK 436
>gi|124023844|ref|YP_001018151.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9303]
gi|123964130|gb|ABM78886.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9303]
Length = 461
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 233/472 (49%), Gaps = 55/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL R REA+V + P VTRD GD FKV+D+ GL
Sbjct: 10 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKP--GVTRDRTYQDGFWGDREFKVVDTGGL 67
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L LA+ A+ ++D + G+ D + +WLR +VA
Sbjct: 68 VFDDDS-EFLPEIREQANLALAEASVALVIVDGQQGVTAADESIAEWLRMQP--CPTLVA 124
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G +L + RVL+
Sbjct: 125 VNKCESPDQGLA----MAAEFWRLGLGEPFPISAIHGAGTGDLLD-----------RVLS 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ + E+DE P+Q+AI+GRPNVGKS+LLNA+ E R +V P G TR
Sbjct: 170 LLPPKHEEA-------EEDE---PIQMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTR 219
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ E +G L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 220 DTIDTRLEREGHPWRLIDTAGIRRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDALDGV 279
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R ++GR V++VNK D + ++ V +E++ + + +
Sbjct: 280 TEQDQRLAGRIEDDGRACVLVVNKWDAVEKDSHTM------PMVEKELRAKLYFLDWATM 333
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QPK 524
+FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q +
Sbjct: 334 LFTSALTGQRVESIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTSRGGRQGR 390
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ Y TQV +RPP+F F++ K D R++ + L+E G P+++ R
Sbjct: 391 LYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQLREGLGFDGTPLKLFWR 442
>gi|399018047|ref|ZP_10720233.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
gi|398102012|gb|EJL92204.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
Length = 447
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 233/469 (49%), Gaps = 47/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T + + +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKSGRSV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG GDP ISA G G+ +L + L+
Sbjct: 118 VNKAEGM-----KYTSVTADFYELGLGDPYVISAAHGDGVADLVD-----------EALD 161
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ Q ++V + +++AIVGRPNVGKSTL+N LL E+RV+ G TR
Sbjct: 162 IAVAQRPDLGEEV------DVARGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE G+ L+DTAG +R K + SV+++ +++ +VV L+LDA++
Sbjct: 216 DSIEIPFERDGKQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISETNVVLLLLDAQQDI 275
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LVV VNK D L + ++ + +++ + ++
Sbjct: 276 SEQDAHIAGFVLESGRALVVGVNKWDGLQSDR--------RDEIKMDLERKLSFLSFAKF 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYF 528
F SAL+ G +M + Y L T +L R L V + + S +PK++Y
Sbjct: 328 HFISALKSTGIGPLMKSIDSAYAAAMSNLTTPKLTRALIEAVEHQQPRRKGSIRPKLRYA 387
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + + D+ R+L K +E F L G P+RI RS
Sbjct: 388 HQGGMNPPVVVIHGNALEGVDDSYKRYLEKHFRETFSLVGTPLRIEFRS 436
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
++D+ + I+GRPNVGKS L N L+ + ++ P TRD E + ++
Sbjct: 173 EVDVARGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPG--TTRDSIEIPFERDGKQYT 230
Query: 174 VLDSAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA 232
++D+AG+ +++ + + T +++T + ++D + + D + ++ +
Sbjct: 231 LIDTAGIRRRGKVFEAIEKFSVVKTLQSISETNVVLLLLDAQQDISEQDAHIAGFVLESG 290
Query: 233 PQIKPIVAMNKCESLHN 249
+ +V +NK + L +
Sbjct: 291 RAL--VVGVNKWDGLQS 305
>gi|384431570|ref|YP_005640930.1| GTP-binding protein engA [Thermus thermophilus SG0.5JP17-16]
gi|333967038|gb|AEG33803.1| GTP-binding protein engA [Thermus thermophilus SG0.5JP17-16]
Length = 431
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 241/468 (51%), Gaps = 59/468 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+++R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPG--VTRDLKEGVVETDRGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI--V 239
SG ++ + L + +F +D R+ L D EV ++LRK KP+ V
Sbjct: 60 --WSGDKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRKKG---KPVILV 114
Query: 240 AMNKCESLHN-GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A + H G L G LGFGDPI S+E G+ EL EA+
Sbjct: 115 ATKVDDPKHELYLGPLYG-------LGFGDPIPTSSEHARGLEELLEAI----------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q T PE ++LAIVGRPN GKS+LLNA+L E+RV+V E G
Sbjct: 157 -----WERLPVRQIETEPE----VAGIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRD++ V F + G+ LVDTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 208 TRDAIDVEFFFGGQRFVLVDTAG-IRKRPESLVEELAIRRSLRAMDEADVVLLVVDPFQV 266
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A++ G+ +++++ K DL+ + + ++E + + +P
Sbjct: 267 GDRELKLANEALDRGKPVLLVITKWDLVDKEDAPKMRRLLREK--------LAHLDHLPR 318
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
VFTSAL + + + + ++ R+PT+ LNRW+ R + +P KI Y
Sbjct: 319 VFTSALTRQNLDRIFREAVRLHELNQTRVPTAELNRWVAVWTSRVQMPNFKGKPLKILYA 378
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ + PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 379 TQPEVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLREVPFRLVFR 426
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL++ +V G+TRD E LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEK 389
W ++ +EK
Sbjct: 63 DKWEKKIQEK 72
>gi|21674598|ref|NP_662663.1| GTP-binding protein EngA [Chlorobium tepidum TLS]
gi|26006711|sp|Q8KBK3.1|DER_CHLTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21647797|gb|AAM73005.1| GTP-binding protein [Chlorobium tepidum TLS]
Length = 437
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 243/469 (51%), Gaps = 59/469 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR++R++ A+V TP VTRD + +F ++D+ G
Sbjct: 3 PLIALVGRPNVGKSTLFNRILRQKSAIVDPTP--GVTRDRHISPGEWQGKQFLLMDTGGY 60
Query: 181 --ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
E + S ++L++T + A IF++D RSGL LDL++ K L+K K
Sbjct: 61 APENDTLSKAMLEQTMRAIEDADA----VIFIVDARSGLTYLDLDIAKILQKTFKDKKIF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
NK ++ +A A + GF +P ISA G G+ ++ E + S+
Sbjct: 117 FVANKVDN-----PQVALEAQSLVKSGFTEPYLISARDGAGVADMLEDVLNSL------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
C + E+D+S ++LA++GRPNVGKS+L+NALL +R +V G
Sbjct: 165 ---PCPEGEEI-------EEDDS---IKLAVLGRPNVGKSSLVNALLGTERHIVSDVPGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ + G L+DTAG +R K + G S +++ + + R V ++LDA
Sbjct: 212 TRDAIDSVLKRNGEEYVLIDTAGLRKRTKIDAGIEFYSSLRTARAIERCDVALVLLDARL 271
Query: 416 ----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++++ A+E +G++++VNK DL+ ++ +A +Q + + I
Sbjct: 272 GLESQDMKIIHMAIERKKGVLILVNKWDLVEKDSKTS------KAFTDNLQNQLGNIGYI 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCL----RLPTSRLNRWLRKVMG-RHSWKDQSAQ 522
PV+FTSAL + ++ IDT + L ++ TS LNR+L++ + RH +
Sbjct: 326 PVIFTSALTKKN----CYRAIDTAAEIALNRRQKISTSNLNRFLQETLTMRHPATKSGKE 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
KIKY TQ+ + P F F + + L + RFL K L+E FD GIPI
Sbjct: 382 LKIKYMTQIDSDHPVFAFFCNDPELLENNFRRFLEKRLRESFDFAGIPI 430
>gi|452943688|ref|YP_007499853.1| ribosome-associated GTPase EngA [Hydrogenobaculum sp. HO]
gi|452882106|gb|AGG14810.1| ribosome-associated GTPase EngA [Hydrogenobaculum sp. HO]
Length = 405
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 233/453 (51%), Gaps = 63/453 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ ++I GR NVGKS LFN++ ++R ++V N P +TRD+ E A D FK++D+ G
Sbjct: 1 MEKIVITGRANVGKSTLFNKISKKRISIVENIP--GITRDVIESKAVFQDKVFKLVDTGG 58
Query: 180 L--ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
L E S +I D+ + IF++D ++GL P D ++ K L + ++
Sbjct: 59 LTDSKEEISQAIRDKVLKLYKEAYK----IIFVVDGKAGLIPEDKDIAKLLYPYKEKV-- 112
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
VA+NK T S +A+E LGF + ISA G G+ EL E +
Sbjct: 113 YVAVNK-------TDSKKASASEFYELGFDNVFEISATHGTGVFELLEEI---------- 155
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLP-LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
T+D+ S E+ E K ++L+ +G+PN GKS+LLN++L++DRV+V A
Sbjct: 156 ------------TKDLPSMEEIEEKADFIKLSFIGKPNSGKSSLLNSILKQDRVIVSNIA 203
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD+V V F Y+G+ LVDTAG + + G +V +S + + ++ V ALV+DA
Sbjct: 204 GTTRDAVDVEFSYEGKDFILVDTAGIRRPSNIDYGIEFFAVNRSLEAIEKSDVCALVIDA 263
Query: 416 EEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E + ++ G+GL+V++NK+DL+ EA+ + + + V
Sbjct: 264 TEGVSRQDMRLASLVNRKGKGLIVVLNKIDLIKDI----------EALKKHVDKKLEFVY 313
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKI 525
P V+ SA EG +++ + ID Y+++ + TS +NR + K++ + S +P
Sbjct: 314 FAPRVYVSAKEGINVFSILQKAIDIYEEYSRPIKTSYVNRTVEKIL--EEYPQNSTKPIK 371
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
Y+T +PPT V + K + LRF K
Sbjct: 372 VYYTVFSPKPPTIVLHTNNKDFWREDYLRFFEK 404
>gi|343503632|ref|ZP_08741442.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
gi|342814424|gb|EGU49368.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
Length = 497
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 244/494 (49%), Gaps = 72/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQAKLGEHDFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ + + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GID--GSEEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIATHLRKIE---KPA 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG GD I+A G G+ +L + AL P E
Sbjct: 114 MLVVNKVDGI-----DPDAASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTS-PEDDESKL-----------------PLQLAIVGRPNVGKS 338
+++ DS + +D+T ++DE KL P+++AI+GRPNVGKS
Sbjct: 165 KMIEDS--KGEGEIEDLTDFIDEDEEKLDYTEEEAEEEFKRLQDQPIKMAIIGRPNVGKS 222
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R+ + SV+
Sbjct: 223 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVV 282
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 KTLKAIEDANVVLLVIDARENISDQDLSLLGFALNSGRSIVLAVNKWD--------GLNN 334
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y R+ TS L R +
Sbjct: 335 DVKEQVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIM 394
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + K L D+ RFL
Sbjct: 395 KNATDDH-------QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVKELPDSYKRFLMNY 447
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 448 YRKSLEIMGTPIRI 461
>gi|294791776|ref|ZP_06756924.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
gi|294793637|ref|ZP_06758774.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294455207|gb|EFG23579.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294457006|gb|EFG25368.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
Length = 444
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 247/476 (51%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFITDNSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ ++ + L+DTAG ++ K E+ S+++S +++ RA +V LVLDA++
Sbjct: 213 TRDSIDTYWTHENQKFVLIDTAGMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G+V++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVVIVVNKWDLVEKDDKTTL--RFTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|282848929|ref|ZP_06258319.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
gi|282581434|gb|EFB86827.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
Length = 444
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 247/476 (51%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ ++ + L+DTAG ++ K E+ S+++S +++ RA +V LVLDA++
Sbjct: 213 TRDSIDTYWTHENQKFVLIDTAGMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G+V++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVVIVVNKWDLVEKDDKTTL--RFTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|67922213|ref|ZP_00515727.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
gi|67855916|gb|EAM51161.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
Length = 465
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 246/482 (51%), Gaps = 62/482 (12%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
++ I LP V IIGRPNVGKS NRL + R+A+V++ P +TRD A D F+
Sbjct: 10 RLTIMALPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEP--GITRDRTYRPAFWADRDFQ 67
Query: 174 VLDSAGL----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLR 229
V+D+ GL ETE L R M A L + AIF++D + GL D E+ WLR
Sbjct: 68 VVDTGGLVFDDETEFLP---LIREQAMAA--LTEASVAIFVVDGQLGLTAGDSEIADWLR 122
Query: 230 KHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRP 289
+ ++ ++A+NKCES G AAE LG G+P +S G G EL + L
Sbjct: 123 QQ--EVPVLLAVNKCESPDQGLIQ----AAEFWELGLGEPYPVSGIHGNGTGELLDEL-- 174
Query: 290 SVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
+ SP++ + + ++I+GRPNVGKS+LLNA L + R
Sbjct: 175 --------------------ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGKKR 214
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAH 407
+V P +G TRD++ E +T L+DTAG ++R+K G S+ ++ K + RA
Sbjct: 215 AIVSPISGTTRDAIDTVVERGEKTYRLIDTAG-IRRKKNVNYGAEFFSINRAFKAIRRAD 273
Query: 408 VVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E R ++EGR +++VNK D + + + +Y+ K ++
Sbjct: 274 VVLLVIDAIEGVTDQDIKLADRIIDEGRAAIIVVNKWDAID-KDSYTIYEYKK-----KV 327
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDT-YQKWCLRLPTSRLNRWLRKVMGRHS- 515
+ + + ++F SA+ G+ R+ + +++D ++ R+ TS +N L + HS
Sbjct: 328 MSRLYFMEWADLIFVSAMSGK-RVEKIFKLVDVAVEEHRRRVSTSVVNEVLEEAAKWHSP 386
Query: 516 -WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
Q Q +I Y TQV ++PPT F++ K +D R++ + +E G PIR+
Sbjct: 387 PTTRQGKQGRIYYGTQVSSQPPTIALFVNDPKRFNDNYRRYIERQFREQIGFLGTPIRLF 446
Query: 575 QR 576
R
Sbjct: 447 WR 448
>gi|427713062|ref|YP_007061686.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
gi|427377191|gb|AFY61143.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
Length = 445
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 233/471 (49%), Gaps = 52/471 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NRL ++V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGEMASIVHDQPG--VTRDRTYRPAFWQDREFVVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L S + L R + A L + + AIFM+D + G LDLE+ WLR+ + +
Sbjct: 61 LVFGDDSEFLPLIRQQAIVA--LNEAKVAIFMVDGQIGPTALDLEIAAWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P IS+ G G EL + L DY+
Sbjct: 117 LAVNKCESPQQGLAQ----AAEFWQLGLGEPYPISSIHGSGTGELLDQLL----DYI--- 165
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ ++T+ E +++AI GRPNVGKS+LLNA L +R +V P +G
Sbjct: 166 --------PPTDPEITAEE-------IRVAIAGRPNVGKSSLLNAFLGAERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-E 416
TRD++ E G+T L+DTAG +R+ + GP V ++ + + RA VV +LDA E
Sbjct: 211 TRDAIDTVVERDGQTYRLIDTAGIRRRKSVDYGPEMFGVHRAFQAIHRADVVLFILDALE 270
Query: 417 EV---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++ E+GR V++VNK D + +++ + V Q + V
Sbjct: 271 DITEQDQRLAGHIAEQGRACVLVVNKWDAVE--KDTYTINDYRHRVYQRLNF----VDWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+F SAL G+ V V ++ R+ T+ +N ++ + HS Q Q K+
Sbjct: 325 EAIFVSALTGQRVDKVFDFVNQAVEQHRRRVSTAVVNEVVQDAVNGHSPPATRQGRQGKV 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPT F++ K D R+L K +E G PIR+ R
Sbjct: 385 YYATQVSTQPPTMAIFVNDTKLFKDNYRRYLEKQFREQLGFKGTPIRLLWR 435
>gi|319789668|ref|YP_004151301.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1]
gi|317114170|gb|ADU96660.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1]
Length = 479
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 244/491 (49%), Gaps = 55/491 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS+LFNRL+ R+ A++ NTP VTRD A + + + ++D+ G
Sbjct: 4 LPVVAIVGRPNVGKSSLFNRLLGRKVAIIDNTP--GVTRDRVVQEADIDEHKVVLVDTGG 61
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ E + T + + +F++D + G++PLD EV K LR+ + IV
Sbjct: 62 V-VEKDAHEFAKETTEQAKRAMEEADVIVFVVDGQEGINPLDEEVAKLLRRWKKPV--IV 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK + + + LGF + I IS +G+ L E + + +
Sbjct: 119 AVNKIDEPF-----MEDLVYDFYRLGFDEVIPISTIHKIGIPTLKEKILEKLPQELKESA 173
Query: 300 NDSCTQNNSSTQ-----DVTSPEDDES------------------KLPLQLAIVGRPNVG 336
+ + S + SPE+ + K P+++AIVGRPN+G
Sbjct: 174 QRAYQREEKSKKAEQLISGESPEELQELSASLERGEEYEIEEEEEKEPIKVAIVGRPNMG 233
Query: 337 KSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSV 396
KSTLLNAL+ E+R +V G TRD++ + +DTAG +R K K S
Sbjct: 234 KSTLLNALVGEERAIVSDIPGTTRDAIDTYVRVGDDEFIFIDTAGIRRRGKIKDIEYYSY 293
Query: 397 MQSRKNLMRAHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALY 446
++S + RA VV L++DA+E A+E+ + +V+ VNK+D L ++
Sbjct: 294 LRSLDAIDRADVVVLMVDAQEGPTERDAKIAGMALEKFKPIVIAVNKIDTLKDQKEW--- 350
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
E + +E+ V + P VF SA E +G ++ Q+ D Y+++ ++ T NR
Sbjct: 351 ----ERLQRELDLVFDFIPFAPRVFISAKERKGLKELLKQIKDLYRQYTKKVRTGEFNRT 406
Query: 507 LRKVMGRHS---WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
LR++M H +K++ KI Y TQVK +PPTF+ F + + + + RFL L+E
Sbjct: 407 LRELMEIHQPPVYKNKIV--KIYYGTQVKTKPPTFLLFSNYPEGIPKSFRRFLENRLREK 464
Query: 564 FDLGGIPIRIT 574
F IPIRI
Sbjct: 465 FGFNKIPIRIV 475
>gi|416225549|ref|ZP_11626897.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
gi|416235991|ref|ZP_11630386.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
gi|326560782|gb|EGE11149.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
gi|326563523|gb|EGE13782.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
Length = 472
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 237/471 (50%), Gaps = 53/471 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+++ P V +IGRPNVGKS LFN+L + R+ALV + +TRD + G A + F V+D
Sbjct: 1 MSIKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAG--LTRDRQYGDAHFENKSFIVVD 58
Query: 177 SAGL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ G+ E + SG+I D A + + + +F++D R+GL D E+ +L
Sbjct: 59 TGGIGEMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG--- 115
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ + NK + +H A AE LGFG+P A +A G G+T L E+L + +
Sbjct: 116 KPVFLVANKMDGVHEA------AYAEFFALGFGEPYATAASHGRGVTNLLESLTADMPED 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
M PED+ L+LAI+GRPNVGKSTL+N LL EDRV+V
Sbjct: 170 M--------------------PEDELDGKALKLAIIGRPNVGKSTLVNRLLGEDRVVVFD 209
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRDS+ + FE +GR+ L+DTAG +R + ++ SV+++ + + A+VV +V+
Sbjct: 210 MPGTTRDSIYIPFEREGRSYVLIDTAGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVVVI 269
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E A++ GR +VV +NK D LS Q K++V EI
Sbjct: 270 DAKEGIVDQDLHMLGYALDAGRAIVVAINKWDGLSQDQ--------KDSVKIEIDRRFNF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V + + SAL G G + + Y+ ++ T++L R L + H +
Sbjct: 322 VPWVKIHLISALYGNGVGKLYPSIHKAYEASMFKVSTNQLTRILEDAVASHPPPMVGGRR 381
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y PP V + +L + R+L + + L G P+++
Sbjct: 382 IKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRYLENVFRNVYKLEGTPLQV 432
>gi|126658269|ref|ZP_01729419.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
gi|126620418|gb|EAZ91137.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
Length = 452
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 243/473 (51%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + R+A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQP--GITRDRTYRPAFWRDRDFQVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A L + AIF++D + G D E+ WLR+ Q+ +
Sbjct: 61 LVFDDDTEFLPLIREQAMAA--LTEASAAIFVVDGQLGPTAGDREISDWLRRQ--QVPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P IS G G EL + L
Sbjct: 117 LAVNKCESPEQGLMQ----AAEFWELGLGEPYPISGIHGSGTGELLDEL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ SP++ + + ++I+GRPNVGKS+LLNA L E R +V P +G
Sbjct: 162 -----------ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGEQRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD++ E T L+DTAG ++R+K G S+ ++ K + RA VV LV+DA
Sbjct: 211 TRDTIDTVVERGENTYRLIDTAG-IRRKKNVNYGAEFFSINRAFKAIRRADVVLLVIDAI 269
Query: 416 -----EEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++ R ++EGR +++VNK D + + + +Y+ Q + + +
Sbjct: 270 DGVTDQDIKLADRIIDEGRAAIIVVNKWDAVE-KDSYTIYE-----YKQRVMDRLYFMEW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ TS +N L + + HS Q Q
Sbjct: 324 ADIIFVSAMSGK-RVENIFELVDLAVEEHRRRVNTSVVNEVLEEAVKWHSPPTSRQGKQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV ++PPT F++ K +D R++ + +E G PIR+ R
Sbjct: 383 RIYYGTQVSSQPPTITLFVNDPKRFNDNYKRYIERQFREQIGFPGTPIRLLWR 435
>gi|427707500|ref|YP_007049877.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
gi|427360005|gb|AFY42727.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
Length = 453
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 237/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A D + V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYMPAYWNDREYLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L + AIF+++ ++G P D E+ +WLR+ + +
Sbjct: 61 LVFNDETEFLPLIRQQALAA--LREACAAIFVVNGQTGPSPADEEIAEWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P ISA G G EL
Sbjct: 117 LAVNKCESPEQGIIQ----AAEFWELGLGEPYPISAIHGNGTGELL-------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D ++ S ++ PE +E +++AI+GRPNVGKS+LLNA + E+R +V P +G
Sbjct: 159 --DELIKHIPSVTEI--PETNE----IKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+ L+DTAG +++ + G S+ ++ K + RA VV LVLDA +
Sbjct: 211 TRDAIDTFIERDGQQYRLIDTAGIRKKKSIDYGTEFFSINRAFKAIRRADVVLLVLDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR +V+VNK D + + + +Y K +Q +
Sbjct: 271 GVTEQDQKLAGRIIEEGRACIVVVNKWDAIE-KDSHTIYDYEK-----SMQERLHFTDWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
+F SAL G+ ++ V + R+ TS +N L + + HS Q KI
Sbjct: 325 STIFVSALTGQRVEKILELVKQAAVEHKRRVSTSVINDVLEEAIRWHSPPTSRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV ++PPT F++ K +D R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVTSQPPTIALFVNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRS 436
>gi|408420958|ref|YP_006762372.1| GTP-binding protein [Desulfobacula toluolica Tol2]
gi|405108171|emb|CCK81668.1| GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 482
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 254/506 (50%), Gaps = 67/506 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNR+IR R+ALV + P VTRD A+ D+ F V+D+ G
Sbjct: 3 PVVALLGRPNVGKSTLFNRIIRSRQALVDDFP--GVTRDRHYADAQWNDIDFTVIDTGGF 60
Query: 181 ---ETEATSGSILDR--TAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ + + I ++ A A+VL +F++D R+GL P D E+ +LR+ +
Sbjct: 61 LSSDDDYFASQIKEQLTAAADQADVL------VFILDGRAGLSPYDRELADFLRRMS--- 111
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ + NK E+ AE LG ISAE G+G+ + + L ++ +Y
Sbjct: 112 KPVFYLVNKIENYKQHDD-----LAEFYSLGIDHFYEISAEHGIGVGDFLDDLIQTLPEY 166
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
DE + P+++AIVGRPNVGKS+L N L E RV+V
Sbjct: 167 --------------------DQAQDEGETPIRIAIVGRPNVGKSSLANRLFGEQRVVVNE 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
+AG TRD++ + EY+GR LVDTAG ++ K + S+++S K+L V +++
Sbjct: 207 KAGTTRDAIELSVEYKGRQFVLVDTAGIRRKGKVTQKLEKFSILKSLKSLDDCDVALILI 266
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
D+EE A + G G + ++NK DLL + K VK+ + ++++
Sbjct: 267 DSEEGITDQDITIAGYAEDRGCGAMFLLNKWDLLDKER-----KNVKKYM-EDLRYKSKF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS---WKDQS 520
++ P + SAL G+ ++ +V+ ++++C R+ T LNR + + R +K
Sbjct: 321 LSYAPAMTISALTGQRCHKILDEVVKIHKEYCHRINTGVLNRIIEDAVYRTEPSLYK--G 378
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K Y TQV RPP FV F++ K + + R+L L++ L PI++ R
Sbjct: 379 KRLKFFYATQVATRPPCFVCFVNFPKAVHFSYERYLLNQLRQMIPLSKTPIKLYFREKTG 438
Query: 581 K---CGSSSSRQNTGQKVGRTFSDKR 603
K G S + QK R + K+
Sbjct: 439 KIKFSGGSREDERIFQKKKRQITKKQ 464
>gi|124267181|ref|YP_001021185.1| GTP-binding protein EngA [Methylibium petroleiphilum PM1]
gi|166225824|sp|A2SHB1.1|DER_METPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|124259956|gb|ABM94950.1| putative GTP-binding protein EngA [Methylibium petroleiphilum PM1]
Length = 446
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 239/469 (50%), Gaps = 47/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL + R+A+V + +TRD G +LG+ F V+D+ G
Sbjct: 3 PVLALVGRPNVGKSTLFNRLTKSRDAIVADFAG--LTRDRHYGDGRLGEREFIVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A SG I A T +A++ IF++DVR+G+ D ++ ++LR ++ ++A
Sbjct: 61 EPTAESG-IYKEMAKQTRQAVAESDVVIFVVDVRAGVTGQDHDIARYLRTAGKKV--LLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E + G AE LG G+P+A+S+ G G+ L A ++ED+ +
Sbjct: 118 ANKAEGMLEGI-----QLAEFYELGMGEPLAVSSAHGQGIRSLLTA---ALEDFAFDEPD 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D D+ + P++LA+ GRPNVGKSTL+N L E+R++ G TR
Sbjct: 170 DLAL--------------DDPERPIRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTR 215
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ V FE G+ L+DTAG ++ K + SV+++ + + A+VV L+LDA +
Sbjct: 216 DAISVPFERNGQKFELIDTAGLRRKGKVFESIEKFSVVKTLQAIADANVVLLLLDATQGV 275
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
++ GR +V+ VNK D + Q +E + + I+ + + PV
Sbjct: 276 TDQDAHIAGYILDSGRAVVLAVNKWDAVDSYQ--------RELLQRSIEQRLAFLKFAPV 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYF 528
+ SA++ +G V + D + +L T L R L + + K A +PK++Y
Sbjct: 328 LHISAIKRQGLGPVWKAIADAWASATKKLATPVLTRVLLEAVQFQQPKRAGAFRPKLRYA 387
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + + ++DA RFL + F L G P+RI +S
Sbjct: 388 HQGGQNPPVIVIHGNSLEHVTDAYKRFLEGRFRCHFQLSGTPMRIEMKS 436
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 83 ALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIR 142
ALED + EPD + D +P+ + + GRPNVGKS L N +
Sbjct: 159 ALEDFAFD-EPDDLALDDPERPI----------------RLAVAGRPNVGKSTLINTWLG 201
Query: 143 RREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGM-TANVL 201
+ ++ P TRD + +F+++D+AGL + +++ + + T +
Sbjct: 202 EERLVAFDLPG--TTRDAISVPFERNGQKFELIDTAGLRRKGKVFESIEKFSVVKTLQAI 259
Query: 202 AKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAES 261
A + ++D G+ D + ++ + ++A+NK +++ + L + E
Sbjct: 260 ADANVVLLLLDATQGVTDQDAHIAGYILDSGRAV--VLAVNKWDAVDSYQRELLQRSIEQ 317
Query: 262 LM--LGFGDPIAISAETGLGMTELYEAL 287
+ L F + ISA G+ +++A+
Sbjct: 318 RLAFLKFAPVLHISAIKRQGLGPVWKAI 345
>gi|110596891|ref|ZP_01385181.1| Small GTP-binding protein domain:GTP-binding [Chlorobium
ferrooxidans DSM 13031]
gi|110341578|gb|EAT60038.1| Small GTP-binding protein domain:GTP-binding [Chlorobium
ferrooxidans DSM 13031]
Length = 437
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 249/474 (52%), Gaps = 65/474 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR++R+R A+V +TP VTRD + +F ++D+ G
Sbjct: 3 PLIALVGRPNVGKSTLFNRILRQRSAIVDSTP--GVTRDRHIADGEWQGKQFLLMDTGGY 60
Query: 181 --ETEATSGSILDRT--AGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
E++ S ++L++T A A+++ +F+ D R+GL DLE+GK L+++ +
Sbjct: 61 NAESDLISKAMLEQTLMAIRDADII------VFVTDARAGLSYEDLELGKLLKRNFQNKQ 114
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
A+NK ES L A + GF P ISA+ G G+ ++
Sbjct: 115 LFFAVNKVESPQ-----LIIEAESFISTGFTKPYFISAKDGSGVADML------------ 157
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
D + +DV ED + LAIVGRPNVGKS+ +NALL +R +V A
Sbjct: 158 ----DDILETFPELEDVPDEEDS----AISLAIVGRPNVGKSSFVNALLNSNRHIVSSIA 209
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ F + + L+DTAG +R K ++G S +++ K L R V ++LDA
Sbjct: 210 GTTRDAIDSRFTRKKQEFVLIDTAGLRKRTKIDRGIEYYSSLRTEKALERCDVALVMLDA 269
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLS-GRQNSALYKRVKEAVPQEIQTVIPQV 464
++++ AVE+ +G +++VNK DL+ + S +Y+ +++ + +
Sbjct: 270 TPGIEKQDLKIINMAVEKKKGALLLVNKWDLIEKDSKTSKIYE-------DNLRSSMGNL 322
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKW----CLRLPTSRLNRWLRKVM-GRHSWKDQ 519
IPV+F SAL + +++ IDT Q+ ++ TS LNR+L + + +H
Sbjct: 323 GYIPVLFISALTKKN----LYRAIDTAQQISESRSRKISTSALNRFLEETLQQKHPSSRT 378
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ KIKY TQ+++ P F F + + + ++FL K L+E F L G+PI +
Sbjct: 379 GKELKIKYMTQIESHWPIFAFFCNDPELVQTNFIKFLEKKLRESFSLEGVPISL 432
>gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6]
gi|31340067|sp|Q8DF02.1|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6]
Length = 496
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 241/487 (49%), Gaps = 59/487 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK+G+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKVGEHDFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + + + A + + + +FM+D R+GL P D + LRK + +
Sbjct: 59 GID--GSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRK--IEKATM 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ +NK + + A+A+ LG + I+A G G+T L E AL P D +L
Sbjct: 115 LVVNKVDGI-----DADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFF-DNLLS 168
Query: 298 VLND------SCTQNNSSTQDVTSPEDDESKL------PLQLAIVGRPNVGKSTLLNALL 345
N+ + ++ + Q S ED E L P++LAI+GRPNVGKSTL N +L
Sbjct: 169 ANNEGEIEDLTDMEDEDAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRIL 228
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
E+RV+V G TRDS+ + E GR L+DTAG +R K + SV+++ K +
Sbjct: 229 GEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVE 288
Query: 405 RAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E A+ GR +V+ VNK D L VKE V
Sbjct: 289 DANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDNEVKENVK 340
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+E+ + V + F SAL G G + V + Y+ R+ TS L R ++ H
Sbjct: 341 KELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDH 400
Query: 515 SWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
QP K+KY PP V + + L D+ R+L ++ D+
Sbjct: 401 -------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDI 453
Query: 567 GGIPIRI 573
G PIRI
Sbjct: 454 MGTPIRI 460
>gi|12322014|gb|AAG51052.1|AC069473_14 GTPase, putative; 34281-30152 [Arabidopsis thaliana]
Length = 659
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 260/537 (48%), Gaps = 79/537 (14%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LL V I+GRPNVGKSALFNRL+ A+V + P VTRD G + GD F V+D+
Sbjct: 152 HLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPG--VTRDRLYGRSYWGDQEFVVVDT 209
Query: 178 AGLETEATSGS------ILDRTAGMTANVLAKTQFAI----------------------F 209
G+ T + S S + T GM L+ + AI F
Sbjct: 210 GGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIF 269
Query: 210 MIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDP 269
++D ++G D+E+ WLRK+ I+A+NKCES G A+E LGF P
Sbjct: 270 VVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ----ASEFWSLGF-TP 324
Query: 270 IAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAI 329
I ISA +G G EL L+ C+ E++E +AI
Sbjct: 325 IPISALSGTGTGEL---------------LDLVCSGLIKLEIMENIEEEEEENYIPAIAI 369
Query: 330 VGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQREKE 388
+GRPNVGKS++LNAL++EDR +V P +G TRD++ F G L+DTAG ++
Sbjct: 370 IGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKKSSV 429
Query: 389 KGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVIVNKM 434
S +SV ++ + + R+ VVALV++A ++++ E EG+G +V+VNK
Sbjct: 430 ASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVVVNKW 489
Query: 435 DLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQ 492
D + + + +A Y+ +++ + + P+V+++A+ G ++ +
Sbjct: 490 DTIPNKNQETAAHYE-------DDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAATVQK 542
Query: 493 KWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSD 550
+ RL T+ LN+ +R+ + S + ++ Y TQ RPPTFV F++ K SD
Sbjct: 543 ERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFSD 602
Query: 551 AELRFLTKSLKEDFDLGGIPIRITQRSVPR---KCGSSSSRQNTGQKVGRTFSDKRT 604
R++ K L+ D G PIR+ RS R G + + G R + KRT
Sbjct: 603 TYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMRMAGLTRQRNLATKRT 659
>gi|383758605|ref|YP_005437590.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
gi|381379274|dbj|BAL96091.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
Length = 447
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 243/469 (51%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ + R+A+V + +TRD G A+LG F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRITKSRDAIVADFAG--LTRDRHYGDARLGGREFIVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E SG ++ A T +A+ +F+ D+R+GL D ++ ++LR Q K I+A
Sbjct: 61 EPEKPSG-VVAEMAKQTKQAVAEADVVVFVTDLRAGLSAQDHDIARFLRTQ--QKKVILA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + + + AE LG G+P +SA G G+ L E ++ED+
Sbjct: 118 VNKAEGM-----AESPLLAEFHELGIGEPHPLSASHGQGVRSLLET---ALEDF------ 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ +D E D + P++LA+ GRPNVGKSTL+NA L E+R++ + G TR
Sbjct: 164 ------DFGDEDEEGGEPD-ADAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA---- 415
D+++V E +GR L+DTAG ++ K + SV+++ + + A+VV L++DA
Sbjct: 217 DAIKVSLEREGRRFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGV 276
Query: 416 EEVRA------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
E A +E GR +V+ +NK D Q L + I++ + + PV
Sbjct: 277 SEQDAHIAGYVLESGRAVVLALNKWDATDDYQRQQLQR--------SIESRLAFLKFAPV 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYF 528
+ SA + G A+ ++ + +++PT L R L + + + + A +PK++Y
Sbjct: 329 LQISAKKRTGLTALWKAILHAHASATVKMPTPVLTRLLIDAVQHQAPRREGAFRPKMRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++DA R+L +E F L G P+RI RS
Sbjct: 389 HQGGMNPPLVVIHGNSLDHITDAYKRYLEGRFREHFKLVGTPMRIEFRS 437
>gi|315122134|ref|YP_004062623.1| GTP-binding protein EngA [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495536|gb|ADR52135.1| GTP-binding protein EngA [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 448
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 234/465 (50%), Gaps = 67/465 (14%)
Query: 146 ALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQ 205
A+V + P +TRD G A + F V+D+AG+E E S I +T T + +
Sbjct: 2 AIVGDCPG--MTRDRLYGKAIINGFEFNVIDTAGIENE-NSHFIAKQTNDQTEIAIDEAH 58
Query: 206 FAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLG 265
A+F+ID +SG+ P D + K+LRK I I+ NK E+ H + + G
Sbjct: 59 LALFLIDSKSGITPYDHLIAKFLRKK--NIPIIIVSNKMET-HIAQRNFHDIYS----FG 111
Query: 266 FGDPIAISAETGLGMTELYEAL----RPSVEDYMLRVLNDSCTQNNSSTQDV----TSPE 317
F + + ISAE G+G+++LY + + DY L + + S +++ P
Sbjct: 112 FKEIVEISAEHGIGISDLYSVIIKLFKQQYPDYQLEIKENPTKTKTSQDKNILIEGKEPT 171
Query: 318 DDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVY 375
D S PL++A+VGRPNVGKSTL+N LL +RVL+GP+AG TRDS+ + +E++ +
Sbjct: 172 DSSNISSKPLRIAVVGRPNVGKSTLINRLLGYNRVLIGPKAGTTRDSIPISWEWKNHPIK 231
Query: 376 LVDTAGWL-------QREKEKGPASLSVMQSRKNLMRAHVVALVLDA------EEVRAVE 422
+ DTAG Q EK+ SV +S +++ ++LDA +++R V+
Sbjct: 232 IFDTAGMRKPSRIIEQVEKK------SVTKSMQSIRVCETTIVLLDATVPFEKQDLRIVD 285
Query: 423 E----GRGLVVIVNKMDLLSGRQNSALYK-RVKEAVPQEIQTVIPQVTGIPVVFTSALEG 477
GR V+ NK DL++ ++ L R+K +PQ I + S G
Sbjct: 286 SVINTGRAAVLAFNKWDLVTTDKSILLQNLRIKAT------NNLPQAGNIRIEAISGHTG 339
Query: 478 RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK---------VMGRHSWKDQSAQPKIKYF 528
G +M V++ + W R+ TSRLN WL + + GR+ ++KY
Sbjct: 340 EGLDNLMASVLEINKLWKTRISTSRLNSWLEQTQLKNPPPTIAGRYH--------RLKYI 391
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
TQ ++ PP+FV F + K + ++ R+L L+ DF L GIPIRI
Sbjct: 392 TQTQSSPPSFVIFCNSPKEIPESYKRYLINRLRFDFSLSGIPIRI 436
>gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
Length = 447
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 244/469 (52%), Gaps = 46/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR+ + R+A+V + +TRD G A+LG F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRITKSRDAIVADFAG--LTRDRHYGDARLGGREFIVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E SG ++ A T +A+ +F+ D+R+G+ D ++ ++LR Q K I+A
Sbjct: 61 EPEKPSG-VVAEMAKQTRQAVAEADVVVFVADLRAGVSAQDHDIARFLRTQ--QKKVILA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + + + AE LG G+P +SA G G+ L EA ++ED+
Sbjct: 118 VNKAEGM-----AESPLLAEFHELGIGEPHPLSASHGQGVRSLLEA---ALEDF------ 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ +D E D + P++LA+ GRPNVGKSTL+NA L E+R++ + G TR
Sbjct: 164 ------DFGDEDEEGAEPD-ADAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA---- 415
D+++V E +GR L+DTAG ++ K + SV+++ + + A+VV L++DA
Sbjct: 217 DAIKVSLEREGRRFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGV 276
Query: 416 EEVRA------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
E A +E GR +V+ +NK D Q L + I++ + + P+
Sbjct: 277 SEQDAHIAGYVLESGRAVVLALNKWDATDEYQRQQLQR--------SIESRLAFLKFAPL 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYF 528
+ SA + G A+ ++ + +++PT L R L V + +D + +PK++Y
Sbjct: 329 LQISAKKRTGLTALWKAILHAHASATVKMPTPVLTRLLIDAVQHQAPRRDGAFRPKMRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++DA R+L +E F L G P+RI RS
Sbjct: 389 HQGGMNPPLVVIHGNSLDHITDAYKRYLEGRFREHFKLVGTPMRIEFRS 437
>gi|218294927|ref|ZP_03495781.1| small GTP-binding protein [Thermus aquaticus Y51MC23]
gi|218244835|gb|EED11359.1| small GTP-binding protein [Thermus aquaticus Y51MC23]
Length = 432
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 237/468 (50%), Gaps = 59/468 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+ +R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRSAVVADEPG--VTRDLKEGVVETEQGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG ++ + L + + +F +D RS L P D EV ++LRK KP++ +
Sbjct: 60 --WSGDRWEKKIQEKVDRALEEAELVLFAVDGRSDLTPADYEVAEYLRKKG---KPVILV 114
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
+ L A LGFGDPI S+E G+ EL A+
Sbjct: 115 ATKVDSPSHEAYLGPLYA----LGFGDPIPTSSEHKRGLEELLRAI-------------- 156
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
Q Q PE ++LAIVGRPN GKS+LLNA+L E+RV+V E G TRD
Sbjct: 157 --WQRLPVKQMDAEPE----VAGIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGTTRD 210
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
++ V G L+DTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 211 TIDVEVYRNGNRFVLLDTAG-IRKRPESIVEELAIRRSLRAIEEADVVLLVVDPFQVGDR 269
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVP---QEIQTVIPQVTGIPV 469
A+E+G+ +++++ K DL+ KE P +E++ + + +P
Sbjct: 270 ELKLANHAMEKGKPVLLVITKWDLVK-----------KEEAPRVRRELREKLAHLEHLPR 318
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V+TSA + + + + YQ R+PT+ LNRWL + + +P KI Y
Sbjct: 319 VYTSAFTKQNLDRIFQEALRLYQLNHTRVPTAELNRWLGVWTAKVQLPNFKGKPLKILYA 378
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ + PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 379 TQPEVAPPTFVFFVNHPEFVTRAFENYLRNRVGEDLGLKEVPFRLVFR 426
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL + +V E G+TRD E + LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLGKRSAVVADEPGVTRDLKEGVVETEQGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEK 389
W ++ +EK
Sbjct: 63 DRWEKKIQEK 72
>gi|30682040|ref|NP_187815.2| GTP-binding protein [Arabidopsis thaliana]
gi|209529777|gb|ACI49783.1| At3g12080 [Arabidopsis thaliana]
gi|332641625|gb|AEE75146.1| GTP-binding protein [Arabidopsis thaliana]
Length = 663
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 262/541 (48%), Gaps = 79/541 (14%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
+I +LL V I+GRPNVGKSALFNRL+ A+V + P VTRD G + GD F
Sbjct: 152 QIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPG--VTRDRLYGRSYWGDQEFV 209
Query: 174 VLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFAI------------------- 208
V+D+ G+ T + S S + T GM L+ + AI
Sbjct: 210 VVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESA 269
Query: 209 ---FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLG 265
F++D ++G D+E+ WLRK+ I+A+NKCES G A+E LG
Sbjct: 270 VIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ----ASEFWSLG 325
Query: 266 FGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPL 325
F PI ISA +G G EL L+ C+ E++E
Sbjct: 326 F-TPIPISALSGTGTGEL---------------LDLVCSGLIKLEIMENIEEEEEENYIP 369
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQ 384
+AI+GRPNVGKS++LNAL++EDR +V P +G TRD++ F G L+DTAG +
Sbjct: 370 AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRK 429
Query: 385 REKEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVI 430
+ S +SV ++ + + R+ VVALV++A ++++ E EG+G +V+
Sbjct: 430 KSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVV 489
Query: 431 VNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVI 488
VNK D + + + +A Y+ +++ + + P+V+++A+ G ++
Sbjct: 490 VNKWDTIPNKNQETAAHYE-------DDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAA 542
Query: 489 DTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKK 546
++ RL T+ LN+ +R+ + S + ++ Y TQ RPPTFV F++ K
Sbjct: 543 TVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAK 602
Query: 547 TLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR---KCGSSSSRQNTGQKVGRTFSDKR 603
SD R++ K L+ D G PIR+ RS R G + + G R + KR
Sbjct: 603 LFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMRMAGLTRQRNLATKR 662
Query: 604 T 604
T
Sbjct: 663 T 663
>gi|55981360|ref|YP_144657.1| GTP-binding protein EngA [Thermus thermophilus HB8]
gi|55772773|dbj|BAD71214.1| GTP-binding protein [Thermus thermophilus HB8]
Length = 431
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 241/468 (51%), Gaps = 59/468 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+++R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPG--VTRDLKEGVVETDRGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI--V 239
SG ++ + L + +F +D R+ L D EV ++LR+ KP+ V
Sbjct: 60 --WSGDKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKG---KPVILV 114
Query: 240 AMNKCESLHN-GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A + H G L G LGFGDPI S+E G+ EL EA+
Sbjct: 115 ATKVDDPKHELYLGPLYG-------LGFGDPIPTSSEHARGLEELLEAI----------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q T PE ++LAIVGRPN GKS+LLNA+L E+RV+V E G
Sbjct: 157 -----WERLPVRQIETEPE----VAGIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRD++ V F + G+ LVDTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 208 TRDAIDVEFFFGGQRFVLVDTAG-IRKRPENLVEELAIRRSLRAMDEADVVLLVVDPFQV 266
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A++ G+ +++++ K DL+ + + ++E + + +P
Sbjct: 267 GDRELKLANEALDRGKPVLLVITKWDLVDKEDAPKMRRLLREK--------LAHLDHLPR 318
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
VFTSAL + + + + ++ R+PT+ LNRW+ R + +P KI Y
Sbjct: 319 VFTSALTRQNLDRIFREAVRLHELNQTRVPTAELNRWVAVWTSRVQMPNFKGKPLKILYA 378
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ + PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 379 TQPEVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLREVPFRLVFR 426
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL++ +V G+TRD E LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEK 389
W ++ +EK
Sbjct: 63 DKWEKKIQEK 72
>gi|46199327|ref|YP_004994.1| GTP-binding protein EngA [Thermus thermophilus HB27]
gi|386360103|ref|YP_006058348.1| ribosome-associated GTPase EngA [Thermus thermophilus JL-18]
gi|46196952|gb|AAS81367.1| GTP-binding protein [Thermus thermophilus HB27]
gi|383509130|gb|AFH38562.1| ribosome-associated GTPase EngA [Thermus thermophilus JL-18]
Length = 431
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 241/468 (51%), Gaps = 59/468 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+++R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPG--VTRDLKEGVVETDRGRFLLVDTGGL-- 59
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI--V 239
SG ++ + L + +F +D R+ L D EV ++LR+ KP+ V
Sbjct: 60 --WSGDKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKG---KPVILV 114
Query: 240 AMNKCESLHN-GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A + H G L G LGFGDPI S+E G+ EL EA+
Sbjct: 115 ATKVDDPKHELYLGPLYG-------LGFGDPIPTSSEHARGLEELLEAI----------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ Q T PE ++LAIVGRPN GKS+LLNA+L E+RV+V E G
Sbjct: 157 -----WERLPVRQIETEPE----VAGIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGT 207
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
TRD++ V F + G+ LVDTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 208 TRDAIDVEFFFGGQRFVLVDTAG-IRKRPESLVEELAIRRSLRAMDEADVVLLVVDPFQV 266
Query: 419 ---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A++ G+ +++++ K DL+ + + ++E + + +P
Sbjct: 267 GDRELKLANEALDRGKPVLLVITKWDLVDKEDAPKMRRLLREK--------LAHLDHLPR 318
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
VFTSAL + + + + ++ R+PT+ LNRW+ R + +P KI Y
Sbjct: 319 VFTSALTRQNLDRIFREAVRLHELNQTRVPTAELNRWVAVWTSRVQMPNFKGKPLKILYA 378
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ + PPTFV F++ + ++ A +L + ED L +P R+ R
Sbjct: 379 TQPEVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLREVPFRLVFR 426
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL++ +V G+TRD E LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62
Query: 382 --WLQREKEK 389
W ++ +EK
Sbjct: 63 DKWEKKIQEK 72
>gi|218290942|ref|ZP_03494999.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239107|gb|EED06310.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1]
Length = 442
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 243/475 (51%), Gaps = 59/475 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GR NVGKS LFNRL+ RR ++V +TP VTRD G ++ + F+V+D+ G
Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRRVSIVEDTPG--VTRDRIYGKSEWNGVPFRVIDTGG 60
Query: 180 LET--EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIK 236
+E E G+++ A + + + +F++D R G+ D V + LR+ H P
Sbjct: 61 IEMDEEDEIGNLIRVQAQIAID---EADVILFVVDGRQGVTQADEHVAQVLRRAHKP--- 114
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++ +NK + + S E LGFG+PI SAE G G +L +A+ ++
Sbjct: 115 VVLGVNKLDHVEQHALSY-----EFYRLGFGEPIPFSAEHGRGTGDLLDAVVAALP---- 165
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+DE + +++A +GRPNVGKS+L+N LL E+RV+V P A
Sbjct: 166 -----------------KQSGEDEDEDAIRIAFIGRPNVGKSSLVNRLLGEERVMVSPVA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD+V E G++ LVDTAG ++ K + SV+++ + L RA V +VLDA
Sbjct: 209 GTTRDAVDTPLERDGQSYVLVDTAGMRRKGKVYERIEKYSVLRALRALDRADVAFVVLDA 268
Query: 416 E----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ A++ G + +VNK D + +A R +E + E P +
Sbjct: 269 QTGIVEQDKRVAGYALDAGCAIAFVVNKWDAIEKDDKTA--HRFEEKIRDE----FPFLR 322
Query: 466 GIPVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
PV+F SAL G+ GR+ + + I Y +R+PTS LNR L S + +
Sbjct: 323 FAPVIFVSALTGQRVGRLLDVAKEIAEYH--AMRVPTSTLNRVLADAQVSVSPPSKGGRR 380
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+I Y TQV +PPTFV F++ + + R+L L+E F G PIRI R+
Sbjct: 381 LRIYYGTQVSVKPPTFVIFVNDTELSHFSYERYLENQLREAFGFRGTPIRIVLRA 435
>gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016]
gi|41016999|sp|Q7MNE7.2|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
Length = 496
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 242/493 (49%), Gaps = 71/493 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK+G+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKVGEHDFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + + + A + + + +FM+D R+GL P D + LRK + +
Sbjct: 59 GID--GSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRK--IEKATM 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ +NK + + A+A+ LG + I+A G G+T L E AL P ++ +
Sbjct: 115 LVVNKVDGI-----DADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLL-- 167
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGKST 339
T + +D+T+ ED+E++ P++LAI+GRPNVGKST
Sbjct: 168 -----STNSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKST 222
Query: 340 LLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQ 398
L N +L E+RV+V G TRDS+ + E GR L+DTAG +R K + SV++
Sbjct: 223 LTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVK 282
Query: 399 SRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKR 448
+ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 TLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDNE 334
Query: 449 VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLR 508
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R ++
Sbjct: 335 VKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMK 394
Query: 509 KVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSL 560
H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MATEDH-------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYF 447
Query: 561 KEDFDLGGIPIRI 573
++ D+ G PIRI
Sbjct: 448 RKSLDIMGTPIRI 460
>gi|389700023|ref|ZP_10185135.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
gi|388591284|gb|EIM31541.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
Length = 449
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 234/469 (49%), Gaps = 44/469 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R+A+V + P +TRD G KL F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTGSRDAIVADYPG--LTRDRHYGDGKLAGHAFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + T G I A T +A+ +F++D+R+GL D ++ K+LR ++ ++A
Sbjct: 61 EPDCTEG-IFKEMARQTRQAVAEADAVVFVVDLRAGLSAQDHDIAKYLRSANKRV--VLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E + N A AE LG G P+AIS+ G G+ L E VE L
Sbjct: 118 ANKAEGMIN-----APQLAEFYELGIGQPVAISSAHGQGIRSLVELALEGVE------LP 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D D S + P++LA+ GRPN GKSTL+NA L E+R++ G TR
Sbjct: 167 DD--------DDEASGPIGGAARPIRLAVAGRPNAGKSTLINAWLGEERLVAFDLPGTTR 218
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D++ V FE G+ L+DTAG ++ K + SV+++ + + A+VV LV+DA E
Sbjct: 219 DTIHVPFERNGQHFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIADANVVLLVVDATEGV 278
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR +VV +NK D + Q +E + + I+ +P + P+
Sbjct: 279 SDQDAHIAGYILEAGRAVVVAINKWDAIDRYQ--------RERLDRSIELRLPFLKFAPI 330
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYF 528
+ SA +G + + + ++PT L R L++ V + + S +PK++Y
Sbjct: 331 LQISATRRQGLGPLWQAITGAWAAAMAKMPTPVLTRLLQEAVQFQQPKRVGSTRPKLRYA 390
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++D R+L ++ F L G P+RI R+
Sbjct: 391 HQGGQNPPLVVIHGNAVDQVTDVYKRYLESRIRAHFSLAGTPLRIEFRA 439
>gi|9294105|dbj|BAB01956.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 537
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 263/541 (48%), Gaps = 79/541 (14%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
+I +LL V I+GRPNVGKSALFNRL+ A+V + P VTRD G + GD F
Sbjct: 26 QIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPG--VTRDRLYGRSYWGDQEFV 83
Query: 174 VLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFAI------------------- 208
V+D+ G+ T + S S + T GM L+ + AI
Sbjct: 84 VVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESA 143
Query: 209 ---FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLG 265
F++D ++G D+E+ WLRK+ I+A+NKCES G A+E LG
Sbjct: 144 VIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ----ASEFWSLG 199
Query: 266 FGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPL 325
F PI ISA +G G EL + V ++++ + + +
Sbjct: 200 F-TPIPISALSGTGTGELLDL----VCSGLIKLEIMENIEEEEEENYIPA---------- 244
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQ 384
+AI+GRPNVGKS++LNAL++EDR +V P +G TRD++ F G L+DTAG +
Sbjct: 245 -IAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRK 303
Query: 385 REKEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVI 430
+ S +SV ++ + + R+ VVALV++A ++++ E EG+G +V+
Sbjct: 304 KSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKGCLVV 363
Query: 431 VNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVI 488
VNK D + + + +A Y+ +++ + + P+V+++A+ G ++
Sbjct: 364 VNKWDTIPNKNQETAAHYE-------DDVREKLRSLKWAPIVYSTAITGHSVDNIVVAAA 416
Query: 489 DTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIKYFTQVKARPPTFVAFLSGKK 546
++ RL T+ LN+ +R+ + S + ++ Y TQ RPPTFV F++ K
Sbjct: 417 TVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAK 476
Query: 547 TLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR---KCGSSSSRQNTGQKVGRTFSDKR 603
SD R++ K L+ D G PIR+ RS R G + + G R + KR
Sbjct: 477 LFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSDKNGGGGGTMRMAGLTRQRNLATKR 536
Query: 604 T 604
T
Sbjct: 537 T 537
>gi|419975694|ref|ZP_14491101.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981603|ref|ZP_14496877.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986784|ref|ZP_14501912.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992536|ref|ZP_14507491.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998759|ref|ZP_14513543.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004583|ref|ZP_14519218.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010330|ref|ZP_14524804.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016462|ref|ZP_14530753.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420022042|ref|ZP_14536215.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027466|ref|ZP_14541458.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033387|ref|ZP_14547192.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039755|ref|ZP_14553383.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044940|ref|ZP_14558415.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050805|ref|ZP_14564100.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056365|ref|ZP_14569522.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061017|ref|ZP_14574010.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067728|ref|ZP_14580517.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073003|ref|ZP_14585635.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420080379|ref|ZP_14592803.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420082549|ref|ZP_14594845.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|424932311|ref|ZP_18350683.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|428942446|ref|ZP_19015440.1| GTP-binding protein Der [Klebsiella pneumoniae VA360]
gi|397342359|gb|EJJ35521.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397342889|gb|EJJ36044.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397346788|gb|EJJ39900.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359715|gb|EJJ52406.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397360787|gb|EJJ53459.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365262|gb|EJJ57887.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374842|gb|EJJ67156.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397378909|gb|EJJ71112.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385445|gb|EJJ77541.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393272|gb|EJJ85034.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395050|gb|EJJ86764.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397402163|gb|EJJ93774.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410397|gb|EJK01679.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397410882|gb|EJK02152.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420622|gb|EJK11682.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427537|gb|EJK18305.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431924|gb|EJK22592.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438497|gb|EJK28995.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397441413|gb|EJK31788.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397452146|gb|EJK42220.1| GTP-binding protein Der [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|407806498|gb|EKF77749.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|426298664|gb|EKV61053.1| GTP-binding protein Der [Klebsiella pneumoniae VA360]
Length = 492
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 239/487 (49%), Gaps = 62/487 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D+ + K LR KP
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKLLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-- 294
+ NK + + + A A+ LG GD I+A G G+T L E AL P V++
Sbjct: 114 FLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEVNP 168
Query: 295 MLRVLNDS-------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALL 345
V D+ QN + ++ PEDD LP++LAIVGRPNVGKSTL N +L
Sbjct: 169 QEEVDEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VKE V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAEDH 397
Query: 515 SWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
QP K+KY PP V + K L D+ R+L ++ D+
Sbjct: 398 -------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDV 450
Query: 567 GGIPIRI 573
G PIRI
Sbjct: 451 MGTPIRI 457
>gi|402496471|ref|YP_006555731.1| GTP-binding protein EngA [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649744|emb|CCF77914.1| GTP-binding protein EngA [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 441
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 243/474 (51%), Gaps = 70/474 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
+ I+G PN GKS LFNRL+ R+ A+V N P VTRD RE ++ DL FKV+D+ G
Sbjct: 4 ITIVGLPNTGKSTLFNRLVGRKAAVVSNIPG--VTRDRREEAGRISDLEFKVIDTGGWN- 60
Query: 183 EATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAPQI 235
DRT + V+ + +F++ F++D + + + KWL++
Sbjct: 61 --------DRT-NFSLQVIEQIEFSLSDSDIIFFLVDAKVQ-DEQNKKFAKWLKRKTN-- 108
Query: 236 KPIVAM-NKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVE- 292
KP++ + NKCES H + L F P+ ISAE LGM +LY L +++
Sbjct: 109 KPVILIANKCES-HKSEN------VDYLQFFDFIGPVYISAEHNLGMVDLYNTLSSAIKN 161
Query: 293 -DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D ++L D ++ ++AI+GR NVGKST LN+LL E+R++
Sbjct: 162 LDQGTKLLVDKFSK-------------------FRIAIIGRSNVGKSTFLNSLLSENRLI 202
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
E TRDSV + + Y G+ + L+DTAG ++ S + +S +++ R+HVV
Sbjct: 203 TSSEPRTTRDSVDIIYNYNGKLITLIDTAGIDKKMNIVDNLESRFIKKSIESIKRSHVVI 262
Query: 411 LVLDA----EEV------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
L+LD+ E+ A++EG+G+++++NK DL++ S L K +++ Q V
Sbjct: 263 LMLDSIMGIEQQNLSIGENAIKEGKGIIIVLNKWDLINKDDRSKLIKFIEQ------QKV 316
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ V+ SAL+G V+ + ++ Q ++ T++LN+WL + H
Sbjct: 317 TRLSLEVSVITISALKGMYCSNVIDKCLEVNQFLNKKISTAKLNKWLISALDNHPHPLVK 376
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY Q +PP F + K++ ++ R+LT L++ F G+P+R+
Sbjct: 377 GRAIKMKYIAQTGTKPPAFSLICNIPKSVDESYKRYLTNDLRKSFFTKGVPVRL 430
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 325 LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ 384
L++ IVG PN GKSTL N L+ +V G+TRD ++DT GW
Sbjct: 2 LKITIVGLPNTGKSTLFNRLVGRKAAVVSNIPGVTRDRREEAGRISDLEFKVIDTGGW-- 59
Query: 385 REKEKGPASLSVM-QSRKNLMRAHVVALVLDAE 416
++ SL V+ Q +L + ++ ++DA+
Sbjct: 60 --NDRTNFSLQVIEQIEFSLSDSDIIFFLVDAK 90
>gi|422348558|ref|ZP_16429451.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659192|gb|EKB32047.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
2_1_59BFAA]
Length = 448
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 243/471 (51%), Gaps = 47/471 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL R R+A+V + P +TRD + G ++G + + V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDAIVADFPG--LTRDRQYGQGRVGRMPYIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + G I+ A + + IF+ D RSGL P D + LR+ ++ I
Sbjct: 59 GFEPVKSEG-IVKAMASQAELAIDEADVVIFVCDARSGLTPHDQRIAVRLRQSGRKV--I 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ +NK E L A AAAE LGFG+P ISA G G+ + + ++E +
Sbjct: 116 LVVNKAEGLS------AVAAAEFYELGFGEPWLISAAHGQGVNAVMDL---ALEGFEEEP 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
++ ++ + L++ + GRPN GKSTL+NAL+ E+R++ G
Sbjct: 167 EDEEDDDPDAPKR-------------LKVTLAGRPNAGKSTLINALIGEERLIAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++RV FEY GR LVDTAG ++ K + SV+++ + + A+VV LV+DA+
Sbjct: 214 TRDAIRVDFEYNGRPYELVDTAGLRKKGKVFEAIEKFSVVKTLQAIEDANVVILVVDAKN 273
Query: 418 VRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A ++ GR LVV VNK DL+S Y R E E++ + +
Sbjct: 274 GIADHDAHIAGYVLDSGRALVVAVNKWDLMSD------YDR--EMFNLELERKLHFLRWA 325
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIK 526
++ SAL+ G +M V + + ++PT +L R L + + R + + +PK +
Sbjct: 326 RMIRISALKRNGLNHLMKAVDEAHAAAYRKIPTPKLTRALFEAVERQQPPRARGGRPKPR 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ Q + PP V + + + ++ R+L +E FDL G P+RI R+
Sbjct: 386 FAHQGGSNPPVIVIHGNALEDIGESYRRYLEGFFREKFDLAGTPLRIEFRT 436
>gi|296113385|ref|YP_003627323.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
gi|416157010|ref|ZP_11604856.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
gi|416218211|ref|ZP_11624759.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
gi|416231831|ref|ZP_11628897.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
gi|416237500|ref|ZP_11631010.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
gi|416242280|ref|ZP_11633316.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
gi|416246888|ref|ZP_11635257.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
gi|416255358|ref|ZP_11639195.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
gi|295921079|gb|ADG61430.1| GTP-binding protein EngA [Moraxella catarrhalis BBH18]
gi|326559230|gb|EGE09661.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
gi|326559869|gb|EGE10269.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
gi|326569645|gb|EGE19697.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
gi|326570126|gb|EGE20171.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
gi|326570864|gb|EGE20888.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
gi|326574414|gb|EGE24356.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
gi|326576405|gb|EGE26314.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
Length = 472
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 236/471 (50%), Gaps = 53/471 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+++ P V +IGRPNVGKS LFN+L + R+ALV + +TRD + G A + F V+D
Sbjct: 1 MSIKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAG--LTRDRQYGDAHFENKSFIVVD 58
Query: 177 SAGL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ G+ E + SG+I D A + + + +F++D R+GL D E+ +L
Sbjct: 59 TGGIGEMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG--- 115
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ + NK + +H A AE LGFG+P A +A G G+T L E+L + +
Sbjct: 116 KPVFLVANKMDGVHEA------AYAEFFALGFGEPYATAASHGRGVTNLLESLTADMPED 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
M P+D+ L+LAI+GRPNVGKSTL+N LL EDRV+V
Sbjct: 170 M--------------------PKDELDSKTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFD 209
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRDS+ + FE +GR+ L+DTAG +R + ++ SV+++ + + A+VV LV+
Sbjct: 210 MPGTTRDSIYIPFEREGRSYVLIDTAGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVI 269
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E A++ GR +VV +NK D LS Q K+ V EI
Sbjct: 270 DAKEGIVDQDLHMLGYALDAGRAIVVAINKWDGLSQDQ--------KDFVKIEIDRRFNF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V + + SAL G G + + Y+ ++ T++L R L + H +
Sbjct: 322 VPWVKIHLISALYGNGVGKLYPSIHKAYEASMFKVSTNQLTRILEDAVASHPPPMVGGRR 381
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y PP V + +L + R+L + + L G P+++
Sbjct: 382 IKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRYLENVFRNVYKLEGTPLQV 432
>gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
Length = 496
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 241/486 (49%), Gaps = 57/486 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK+G+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKVGEHDFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + + + A + + + +FM+D R+GL P D + LRK + +
Sbjct: 59 GID--GSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRK--IEKATM 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML- 296
+ +NK + + A+A+ LG + I+A G G+T L E AL P ++ +
Sbjct: 115 LVVNKVDGI-----DADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSA 169
Query: 297 ----RVLNDSCTQNNSSTQDVTSPEDDESKL------PLQLAIVGRPNVGKSTLLNALLQ 346
+ + + ++ + Q S ED E L P++LAI+GRPNVGKSTL N +L
Sbjct: 170 NSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILG 229
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
E+RV+V G TRDS+ + E GR L+DTAG +R K + SV+++ K +
Sbjct: 230 EERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVED 289
Query: 406 AHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV LV+DA E A+ GR +V+ VNK D L VKE V +
Sbjct: 290 ANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDNEVKENVKK 341
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
E+ + V + F SAL G G + V + Y+ R+ TS L R ++ H
Sbjct: 342 ELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDH- 400
Query: 516 WKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
QP K+KY PP V + + L D+ R+L ++ D+
Sbjct: 401 ------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIM 454
Query: 568 GIPIRI 573
G PIRI
Sbjct: 455 GTPIRI 460
>gi|288934098|ref|YP_003438157.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22]
gi|290508296|ref|ZP_06547667.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55]
gi|288888827|gb|ADC57145.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22]
gi|289777690|gb|EFD85687.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55]
Length = 492
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 238/487 (48%), Gaps = 62/487 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D+ + K LR KP
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + + + A A+ LG GD I+A G G+T L E AL P V++
Sbjct: 114 FLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEISP 168
Query: 297 RVLNDS---------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALL 345
+ D QN + ++ PEDD LP++LAIVGRPNVGKSTL N +L
Sbjct: 169 QEEVDEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VKE V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAEDH 397
Query: 515 SWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
QP K+KY PP V + K L D+ R+L ++ D+
Sbjct: 398 -------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDV 450
Query: 567 GGIPIRI 573
G PIRI
Sbjct: 451 MGTPIRI 457
>gi|334134171|ref|ZP_08507684.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
gi|333608299|gb|EGL19600.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
Length = 440
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 237/469 (50%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS +FNR+I R A+V + P VTRD G+ + D F V+D+ G+
Sbjct: 4 PILAIVGRPNVGKSTIFNRIIGDRLAIVEDKPG--VTRDRLYGIGEWLDREFSVIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E E I+ + + IFM+D ++G+ D EV + L + KP+V
Sbjct: 62 EVEGED-QIMKSVRVQAELAIEEADVIIFMVDAKAGVTSADQEVAQLLFRSR---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ E LGFGDPI IS G+G+ ++ EA D+
Sbjct: 118 AVNKVDNIQR-----QDEIYEFYSLGFGDPIGISGAHGIGIGDMLEAAAAHFPDH----- 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
P+++ + +++A++GRPNVGKS+L+NA+L EDRV+V +AG T
Sbjct: 168 ----------------PDEEYGEEVIKVALIGRPNVGKSSLVNAILGEDRVIVSDQAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE + ++DTAG +R K + SVM++ K + RA VV +V++ EE
Sbjct: 212 RDAIDTPFELDDQKYVIIDTAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVINGEEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ + +VNK D++ + + +++ Q+I+ +T P
Sbjct: 272 IIEQDKHIAGYAHEAGKAAIFVVNKWDVVE-KDDKTMHQ-----FTQKIRDHFLFMTYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
V++ SA + ++ V ++ +R+ T LN + VM D+ + +I Y
Sbjct: 326 VLYVSARTTQRVQKLLPMVNQVAEQHTMRVQTHVLNDVVSDAVMFNPPPTDKGKRLRINY 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTFV F++ + + R+L ++ F G PIR+ R
Sbjct: 386 ATQVSVKPPTFVFFVNEPDMMHFSYERYLENKIRGAFGFEGTPIRLFTR 434
>gi|152971372|ref|YP_001336481.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238895966|ref|YP_002920702.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262040248|ref|ZP_06013499.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330007822|ref|ZP_08306080.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3]
gi|365143335|ref|ZP_09348255.1| GTPase Der [Klebsiella sp. 4_1_44FAA]
gi|386035993|ref|YP_005955906.1| GTP-binding protein Der [Klebsiella pneumoniae KCTC 2242]
gi|402779534|ref|YP_006635080.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419764233|ref|ZP_14290473.1| ribosome biogenesis GTPase Der [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|425075476|ref|ZP_18478579.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425082676|ref|ZP_18485773.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425086111|ref|ZP_18489204.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425092758|ref|ZP_18495843.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428936464|ref|ZP_19009868.1| GTP-binding protein Der [Klebsiella pneumoniae JHCK1]
gi|449059467|ref|ZP_21737162.1| GTP-binding protein Der [Klebsiella pneumoniae hvKP1]
gi|166198723|sp|A6TCD0.1|DER_KLEP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|150956221|gb|ABR78251.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238548284|dbj|BAH64635.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259042357|gb|EEW43377.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328535310|gb|EGF61796.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3]
gi|339763121|gb|AEJ99341.1| GTP-binding protein Der [Klebsiella pneumoniae KCTC 2242]
gi|363649677|gb|EHL88784.1| GTPase Der [Klebsiella sp. 4_1_44FAA]
gi|397742816|gb|EJK90034.1| ribosome biogenesis GTPase Der [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|402540472|gb|AFQ64621.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405594350|gb|EKB67765.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405600928|gb|EKB74093.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405605644|gb|EKB78673.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405611984|gb|EKB84750.1| GTPase Der [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|426298274|gb|EKV60692.1| GTP-binding protein Der [Klebsiella pneumoniae JHCK1]
gi|448874752|gb|EMB09784.1| GTP-binding protein Der [Klebsiella pneumoniae hvKP1]
Length = 492
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 239/487 (49%), Gaps = 62/487 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D+ + K LR KP
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-- 294
+ NK + + + A A+ LG GD I+A G G+T L E AL P V++
Sbjct: 114 FLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEVNP 168
Query: 295 MLRVLNDS-------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALL 345
V D+ QN + ++ PEDD LP++LAIVGRPNVGKSTL N +L
Sbjct: 169 QEEVDEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VKE V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAEDH 397
Query: 515 SWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
QP K+KY PP V + K L D+ R+L ++ D+
Sbjct: 398 -------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDV 450
Query: 567 GGIPIRI 573
G PIRI
Sbjct: 451 MGTPIRI 457
>gi|421780191|ref|ZP_16216681.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
gi|407812985|gb|EKF83769.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
Length = 472
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 236/471 (50%), Gaps = 53/471 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+++ P V +IGRPNVGKS LFN+L + R+ALV + +TRD + G A + F V+D
Sbjct: 1 MSIKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAG--LTRDRQYGDAHFENKSFIVVD 58
Query: 177 SAGL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ G+ E + SG+I D A + + + +F++D R+GL D E+ +L
Sbjct: 59 TGGIGEMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG--- 115
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ + NK + +H A AE LGFG+P A +A G G+T L E+L + +
Sbjct: 116 KPVFLVANKMDGVHEA------AYAEFFALGFGEPYATAASHGRGVTNLLESLTADMPED 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
M P+D+ L+LAI+GRPNVGKSTL+N LL EDRV+V
Sbjct: 170 M--------------------PKDELDSKTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFD 209
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRDS+ + FE +GR+ L+DTAG +R + ++ SV+++ + + A+VV LV+
Sbjct: 210 MPGTTRDSIYIPFEREGRSYVLIDTAGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVI 269
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E A++ GR +VV +NK D LS Q K+ V EI
Sbjct: 270 DAKEGIVDQDLHMLRYALDAGRAIVVAINKWDGLSQDQ--------KDFVKIEIDRRFNF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V + + SAL G G + + Y+ ++ T++L R L + H +
Sbjct: 322 VPWVKIHLISALYGNGVGKLYPSIHKAYEASMFKVSTNQLTRILEDAVASHPPPMVGGRR 381
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y PP V + +L + R+L + + L G P+++
Sbjct: 382 IKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRYLENVFRNVYKLEGTPLQV 432
>gi|123965688|ref|YP_001010769.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9515]
gi|166225838|sp|A2BV51.1|DER_PROM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123200054|gb|ABM71662.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9515]
Length = 458
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 242/473 (51%), Gaps = 55/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP++ IIGRPNVGKS L NRL + +A+V++ P VTRD A G F+V+D+ G
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKP--GVTRDRTYQNASWGGKEFQVVDTGG 60
Query: 180 LETEATSGSILD-RTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L E S + + RT A L + A+F++D G+ DL + KWLR K I
Sbjct: 61 LVFEDDSEFLPEIRTQVFLA--LEEASIALFVVDGNQGVTTGDLSIAKWLRN--SDCKTI 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLR 297
VA+NKCESL G A+E LG G+P +SA G G +L + + + +D+
Sbjct: 117 VAVNKCESLSLGIS----MASEFWKLGLGEPYPVSAIHGSGTGDLLDLVIDELPKDF--- 169
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
DV ED + ++I+GRPNVGKS+LLNA+ E R +V +G
Sbjct: 170 --------------DVEDKED-----KVMMSIIGRPNVGKSSLLNAICGEKRAIVSDISG 210
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDA 415
T DS+ + +VDTAG ++R+K + G + ++ K++ R+ V LV+DA
Sbjct: 211 TTTDSIDTLIKKNSHLWKIVDTAG-IRRKKNVKYGTEFFGINRAFKSIDRSDVCVLVIDA 269
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ R E+GR V++VNK DL+ + NS +Y+ V +E+++ + +
Sbjct: 270 IDGVTDQDQKLAGRIEEQGRACVIVVNKWDLVE-KNNSTIYQ-----VEKELRSKLYFLH 323
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SAL G+ + ++ + +R+ TS +N L++ +G S K Q
Sbjct: 324 WSKMIFISALTGQRVENIFEHALNAVTQHRMRVTTSVVNEVLKEALGWKSPPTKRSGKQG 383
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
++ Y TQVK +PPTF F++ K R++ K ++ + G PI + R
Sbjct: 384 RLYYGTQVKNQPPTFTLFVNDPKLFGITYRRYIEKQIRLNLGFEGSPIILLWR 436
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 107 EKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAK 166
E P DF D + IIGRPNVGKS+L N + + A+V + T D + L K
Sbjct: 164 ELPKDFDVEDKEDKVMMSIIGRPNVGKSSLLNAICGEKRAIVSDIS--GTTTDSIDTLIK 221
Query: 167 LGDLRFKVLDSAGLETE-----ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLD 221
+K++D+AG+ + T ++R + ++ + +ID G+ D
Sbjct: 222 KNSHLWKIVDTAGIRRKKNVKYGTEFFGINR----AFKSIDRSDVCVLVIDAIDGVTDQD 277
Query: 222 LEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAE----SLMLGFGDPIAISAETG 277
++ + + ++ +NK + + ++ E L + I ISA TG
Sbjct: 278 QKLAGRIEEQGRAC--VIVVNKWDLVEKNNSTIYQVEKELRSKLYFLHWSKMIFISALTG 335
Query: 278 LGMTELYEALRPSVEDYMLRV 298
+ ++E +V + +RV
Sbjct: 336 QRVENIFEHALNAVTQHRMRV 356
>gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
Length = 444
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 248/476 (52%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EVG LR KP+V
Sbjct: 62 EFITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVGNILRASG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ + + L+DTAG ++ K ++ S+++S +++ R+ +V LVLDA++
Sbjct: 213 TRDSIDTYWTHGDQKFVLIDTAGMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G+V++VNK DL+ + L R E + +E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVVIVVNKWDLVEKDDKTTL--RFTEDIYEELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|440780870|ref|ZP_20959341.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
gi|440221458|gb|ELP60663.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
Length = 438
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 233/469 (49%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L +R A+V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTP--GVTRDRIYAEAEWLNNLFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E E +S IL + + +F++D + GL D EV LRK KPIV
Sbjct: 62 EPE-SSDIILAQMRRQAQMAIETADVIVFLVDGKQGLTDADNEVALMLRKSK---KPIVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK + L + S E LG GDP+ ISA GLG+ ++ + +++
Sbjct: 118 VVNKIDKLADEQNSF-----EFYNLGIGDPVTISASQGLGLGDMLD-----------KIV 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ +N S EDDE +++A+VGRPNVGKS+L+N LL EDRV+V G T
Sbjct: 162 GNFKELDNGS-------EDDEY---IKIAVVGRPNVGKSSLINKLLGEDRVIVSDIPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEEV 418
RD+V + E + L+DTAG ++ K K SV+++ + RA V L+LDA E
Sbjct: 212 RDAVDSYLETEEGKFVLIDTAGLRRKSKVKEEIERYSVIRTLAAIERADVCILILDATEQ 271
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E + ++VIVNK DL+ + + IQ + +
Sbjct: 272 LSDQDEKIIGYAHELNKAIMVIVNKWDLIEKDDKTM------NVFKKNIQYKLSFMPYAQ 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKY 527
+F SA G+ V+ +V Y +C R+ T LN + K V+ + + KI Y
Sbjct: 326 YMFISAKTGQRVNKVLEEVKKCYNNYCRRISTGVLNDIVSKAVLMKEPPVVALKRLKIYY 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTF+ F++ + + R+L L+E F+ G I++ R
Sbjct: 386 VTQVSIKPPTFIFFVNDTNAIHFSYERYLENKLRESFNFAGTGIKVIFR 434
>gi|395227158|ref|ZP_10405486.1| GTP-binding protein EngA [Citrobacter sp. A1]
gi|424731699|ref|ZP_18160281.1| gtp-binding protein [Citrobacter sp. L17]
gi|394719341|gb|EJF24946.1| GTP-binding protein EngA [Citrobacter sp. A1]
gi|422893837|gb|EKU33653.1| gtp-binding protein [Citrobacter sp. L17]
Length = 504
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 234/482 (48%), Gaps = 38/482 (7%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEIEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADAAIAKHLRS 122
Query: 231 HAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRP 289
Q + NK + L A + LG G+ I+A G G+ L E L P
Sbjct: 123 R--QKPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLP 175
Query: 290 SVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNA 343
++D + D Q + PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 176 WMDDVAPQEEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNR 235
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L EDRV+V G TRDS+ + + R L+DTAG +R K + SV+++ +
Sbjct: 236 ILGEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQA 295
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D L + VKE
Sbjct: 296 IEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQ 347
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 348 VKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVE 407
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H + + K+KY PP V + K L D+ R+L ++ D+ G PI
Sbjct: 408 DHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPI 467
Query: 572 RI 573
RI
Sbjct: 468 RI 469
>gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus glucosetrophus SIP3-4]
gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688]
gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus glucosetrophus SIP3-4]
gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688]
Length = 523
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 233/467 (49%), Gaps = 49/467 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT++++GRPNVGKS LFNRL + R+ALV + P +TRD G GD F V+D+
Sbjct: 1 MLPTIVLVGRPNVGKSTLFNRLTKSRDALVADLPG--LTRDRHYGRGIGGDKPFLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IFM+D R+GL P D + LRK Q +
Sbjct: 59 GFEPLVDSG-ILKEMAKQTLLAIDEADVVIFMVDGRNGLAPQDKVIADRLRKS--QRPVL 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NK E + A +AE LG GDP++IS+ G G+ +L E +
Sbjct: 116 LAVNKTEGMQR-----AIVSAEFHELGLGDPLSISSAHGEGVRDLVELALADFPEPEPEE 170
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
ND S+ P ++AIVGRPNVGKSTL+NALL ++RV+ + G
Sbjct: 171 ENDG------------------SRTP-KVAIVGRPNVGKSTLVNALLGQERVIAFDQPGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + E G+ ++DTAG +R K + SV+++ + + A+V LV+DA+E
Sbjct: 212 TRDSIHIDLERNGKHYTIIDTAGVRKRGKVFEAIEKFSVIKTIQAIEEANVAILVVDAQE 271
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR LVV +NK D L + ++ + +EI + +
Sbjct: 272 GITEQDAHVAAYILEAGRALVVAINKWD--------GLKEDERDWIKREIDRKLQFLDFA 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
+ SAL +G + V Y+ +L T +L R L + +H + +PK++
Sbjct: 324 KFHYISALRKKGLPELFTSVDGAYKAAMAKLSTPQLTRVLEDAIIQHQPPISKGIRPKLR 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y Q + PP V + + D+ R+L ++ F L G P+R+
Sbjct: 384 YAHQGGSNPPIVVIHGNHVDGVKDSYKRYLEGVFRKAFQLTGTPLRV 430
>gi|427720843|ref|YP_007068837.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
gi|427353279|gb|AFY36003.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
Length = 454
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 238/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A D + V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYKPAYWSDREYLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R MTA LA+ AIF++D ++G P D E+ +WLR+ + +
Sbjct: 61 LVFNDDTEFLPLIRQQAMTA--LAEASAAIFLVDGQTGPTPADEEIAEWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P ISA G G ++
Sbjct: 117 LAVNKCESPEQGLMQ----AAEFWELGLGEPFPISAIHGSGTGDIL-------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D ++ + +V PE +E +++AI+GRPNVGKS+LLNA + E+R +V P +G
Sbjct: 159 --DELIKHIPAVTEV--PETNE----IKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E +T L+DTAG +++ E G S+ ++ K + RA VV LVLDA +
Sbjct: 211 TRDAIDTVVERNEQTYRLIDTAGIRKKKSIEYGTEFFSINRAFKAIRRADVVLLVLDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR +++VNK D + + + +Y K +++ +
Sbjct: 271 GVTEQDQKLAGRILEEGRACIIVVNKWDAVE-KDSYTIYDYEK-----DLEGRLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
++ SA+ G+ ++ V + R+ TS +N L + HS Q KI
Sbjct: 325 DTIYVSAVTGQRVEKILELVNTAAESHKRRVTTSVINEVLTDAVSWHSPPASRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV +PPT F++ K ++ R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVSIQPPTIALFVNEAKRFNENYRRYIERQFRQHLGFKGTPIRLLWRS 436
>gi|269837313|ref|YP_003319541.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
gi|269786576|gb|ACZ38719.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
Length = 445
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 232/468 (49%), Gaps = 54/468 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPN GKS LFNRL+ R A+V + P TRD A G + F V+D+ GL
Sbjct: 4 PLVAIVGRPNTGKSTLFNRLVGERRAIVEDLPG--TTRDRIYAEASWGGVTFDVVDTGGL 61
Query: 181 ETE-----ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+E A++ I T + + +FM+D ++G+ D EV +R+ +
Sbjct: 62 LSEQEIERASAAEIAQATQEQAELAIEQADVIVFMVDGQAGVTAGDHEVADLIRRAKRPV 121
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
++A+NK E+ + + AA E LG GDP ISA G G+ +L +A+ + +
Sbjct: 122 --LLAVNKAEARN-----IQDAAVEFYELGLGDPYPISALHGTGVGDLLDAIIAHLPE-- 172
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ E + ++P +AIVGRPNVGKS LLNALL + R +V
Sbjct: 173 -------------------TTEAEREEVP-SIAIVGRPNVGKSALLNALLGQSRQIVSSI 212
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD+V + G V LVDTAG + + E+G SV++S + + RA V LV+D
Sbjct: 213 PGTTRDAVDTEITWAGNRVVLVDTAGIRRPGRIERGIEKYSVLRSTRAVERADVAVLVID 272
Query: 415 AEE---------VRAVEEG-RGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A E A+ E +G++V VNK DL+ R + ++ + +
Sbjct: 273 ATEPFTAQDQAIAGAIAEAKKGIIVAVNKWDLVEKDH------RTMKEFTEKAREAFHFI 326
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-P 523
+ P+VF SAL G+ VM + + + R+PT LNR +R + RH + +
Sbjct: 327 SYAPIVFISALTGQRVNQVMELALAIFAERQRRIPTGELNRVIRDAVYRHPPPTKPNKWL 386
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
KI Y TQ PPTFV F++ + + + R+L +L++ + G PI
Sbjct: 387 KIYYVTQADVNPPTFVFFVNAPQNVHFSYKRYLENTLRKHYGFTGTPI 434
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P++ I+GRPNVGKSAL N L+ + +V + P TRD + R ++D+AG
Sbjct: 181 VPSIAIVGRPNVGKSALLNALLGQSRQIVSSIPG--TTRDAVDTEITWAGNRVVLVDTAG 238
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ +++ + + + + + A+ +ID D + + + I I
Sbjct: 239 IRRPGRIERGIEKYSVLRSTRAVERADVAVLVIDATEPFTAQDQAIAGAIAEAKKGI--I 296
Query: 239 VAMNK---CESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYE 285
VA+NK E H A E+ + + + ISA TG + ++ E
Sbjct: 297 VAVNKWDLVEKDHRTMKEFTEKAREAFHFISYAPIVFISALTGQRVNQVME 347
>gi|149277444|ref|ZP_01883585.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
gi|149231677|gb|EDM37055.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
Length = 433
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 242/474 (51%), Gaps = 67/474 (14%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
+ I+GRPNVGKS LFNRL R+A+V DD VTRD G A+ D +F V+D+ G
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIV----DDFSGVTRDRHYGSAEWTDKQFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
A S + + A + V+ + A +FM+DV +G+ LD ++ + LR+ KP
Sbjct: 61 V--ANSEDVFE--AAIREQVVIAIEEATVLLFMVDVVTGITDLDDDIAQLLRRSK---KP 113
Query: 238 I-VAMNKCES--LHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
+ + +NK ++ L N G G G+ IS+ TG G +L + + ED
Sbjct: 114 VFIVVNKVDNTQLQNDASVFYG-------FGLGEIYPISSMTGSGTGDLLDEVIKHFEDI 166
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
PE+ E+ LP ++ IVGRPNVGKS+L+NAL+ ++R +V P
Sbjct: 167 ---------------------PEE-ENALP-KITIVGRPNVGKSSLINALIGKERNIVTP 203
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVL 413
AG TRDS+ +H+ G +DTAG ++ K K SVM++ K L A VV L++
Sbjct: 204 IAGTTRDSIHIHYNQFGHEFMFIDTAGLRKKTKVKENIEFYSVMRTIKALEEADVVVLMI 263
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E A + +G+V++VNK DL+ ++S K ++ + Q++Q
Sbjct: 264 DAMEGLESQDVNIFHLAEKNKKGIVILVNKWDLV--EKDSKTIKIFEDQIRQKLQP---- 317
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQ 522
T +P++FTS L + + ++ ++ ++PTS+LN + ++ + +
Sbjct: 318 FTDVPIIFTSVLNKQRIFQAIETSLEVFKNRGKKVPTSKLNDVMLPIIENYPPPALKGKY 377
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KIKY TQ+ P F F + + + + RF+ L+E FD G+PI+I R
Sbjct: 378 IKIKYITQINGSSPMFAFFCNLPQYIKEPYKRFIENKLREHFDFSGVPIQIYFR 431
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 21/264 (7%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLD 176
N LP + I+GRPNVGKS+L N LI + +V TP TRD I + G F +D
Sbjct: 171 NALPKITIVGRPNVGKSSLINALIGKERNIV--TPIAGTTRDSIHIHYNQFGH-EFMFID 227
Query: 177 SAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+AGL + ++ + M T L + + MID GL D+ + K+ I
Sbjct: 228 TAGLRKKTKVKENIEFYSVMRTIKALEEADVVVLMIDAMEGLESQDVNIFHLAEKNKKGI 287
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAE--SLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
++ +NK + + + ++ + + F D + I + L +++A+ S+E
Sbjct: 288 --VILVNKWDLVEKDSKTIKIFEDQIRQKLQPFTD-VPIIFTSVLNKQRIFQAIETSLEV 344
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLP------LQLAIVGRPNVGKSTLLNALLQE 347
+ N S DV P + P +++ + + N G S +
Sbjct: 345 FK----NRGKKVPTSKLNDVMLPIIENYPPPALKGKYIKIKYITQIN-GSSPMFAFFCNL 399
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQG 371
+ + P + +R HF++ G
Sbjct: 400 PQYIKEPYKRFIENKLREHFDFSG 423
>gi|300770935|ref|ZP_07080812.1| ribosome-associated GTPase EngA [Sphingobacterium spiritivorum ATCC
33861]
gi|300762208|gb|EFK59027.1| ribosome-associated GTPase EngA [Sphingobacterium spiritivorum ATCC
33861]
Length = 441
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 232/474 (48%), Gaps = 57/474 (12%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVL 175
N+ V I+GRPNVGKS LFNRL R+A+V DD VTRD A+ +F V+
Sbjct: 8 NMANIVAIVGRPNVGKSTLFNRLTESRKAIV----DDFSGVTRDRHYESAEWIGKKFTVI 63
Query: 176 DSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
D+ G + + + + IFM+DV +G+ LD E+ LR+
Sbjct: 64 DTGGF-VHGSDDVFEEAIRDQVYIAIEEASVIIFMVDVTTGITDLDDEIADILRRST--- 119
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ VA NK + L +AE G G+ IS+ TG G EL +A+ +
Sbjct: 120 KPVYVAANKVDH-----AKLHHDSAEFYAFGLGEIYNISSATGSGTGELLDAVVSTF--- 171
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
E++ES LP + IVGRPNVGKS+L NALL +DR +V P
Sbjct: 172 -------------------EVEEEEESTLP-KYTIVGRPNVGKSSLTNALLGKDRNIVTP 211
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVL 413
AG TRDS+R+H+ G L+DTAG ++ K SVM++ K L + VV L+L
Sbjct: 212 VAGTTRDSIRIHYNQFGHEFLLIDTAGMRRKSKVNEDIEFYSVMRTIKALEDSDVVILML 271
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA++ A + +G++++VNK DL+ K +KE I+ I
Sbjct: 272 DAQDGIEAQDINIFHLAEKNKKGVMIVVNKWDLIEKDN-----KTMKE-FEARIREKIAP 325
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQ 522
T +P+VFTS E + + YQ ++PTS+LN + +V+ + +
Sbjct: 326 FTDVPIVFTSVTEKQRIHKTLEVAAKVYQNKTKKIPTSKLNEVMLQVIENYPPPAIKGKY 385
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KIKY TQ+ R P F F + + + D R++ L+E+FD G+PI++ R
Sbjct: 386 IKIKYVTQIPGRSPMFAFFCNLPQYIKDPYKRYVENKLRENFDFEGVPIQLYFR 439
>gi|302806046|ref|XP_002984773.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
gi|300147359|gb|EFJ14023.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
Length = 490
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 258/515 (50%), Gaps = 76/515 (14%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LLP V I+GRPNVGKSALFNR++ R A+V++ P VTRD G + F ++D+
Sbjct: 5 HLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEP--GVTRDRLYGRVRGSVQEFMLIDT 62
Query: 178 AG---LETEATSG---------------------SILDRTAGMTANVLAKTQFAIFMIDV 213
G + T A SG S++++ A A+ + + +F++D
Sbjct: 63 GGVLTIPTSAESGLAGGSVAAAQAKKDAAVAGLPSMIEQQA---ASAVEEACALVFVVDG 119
Query: 214 RSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAIS 273
++GL D+E+G WLR+ K +A+NKCES G AAE LGF P+ +S
Sbjct: 120 QAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQ----AAEFWSLGF-TPVPVS 174
Query: 274 AETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRP 333
A +G G+ +L E + ++++ QD E E PL +AI+GRP
Sbjct: 175 AISGSGVPDLLEDVTSAIKE----------------KQD--ELEASEGDRPLSVAIIGRP 216
Query: 334 NVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQREKEKGPA 392
NVGKS++LNA++ ++R +V P +G TRD++ +G+ L+DTAG +R
Sbjct: 217 NVGKSSILNAIVGKERTIVSPVSGTTRDAIDTEVAGPEGKVFRLIDTAGIRKRAAIASGG 276
Query: 393 ----SLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLS 438
SL V + + + RA VVALV++A R ++G+ +++VNK D +
Sbjct: 277 SKTESLCVQSALRAIRRADVVALVIEAMTCATEQDYRLGERIEKDGKACIIVVNKWDTVP 336
Query: 439 GRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 498
+ + Y +++ + + P+V+TSA G+ ++ + Q+ R+
Sbjct: 337 DKNAESTY-----WYDMDVREKLRVLKWAPIVYTSATSGQRVQKILATALSAGQERERRI 391
Query: 499 PTSRLNRWLRKV--MGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFL 556
T+ LN+ ++ M + + ++ + TQ RPPTFV F++ +K D R++
Sbjct: 392 STAILNQVVQDAINMKQPPTTRGGRKGRLYFCTQATTRPPTFVFFVNDEKLFPDDYKRYM 451
Query: 557 TKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNT 591
K L+++ G PIR+ RS ++ S+Q+T
Sbjct: 452 EKQLRQNIGFPGTPIRLFWRS--KRLARPGSKQST 484
>gi|343509880|ref|ZP_08747142.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
gi|343515692|ref|ZP_08752743.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342797862|gb|EGU33499.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342803677|gb|EGU39027.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
Length = 497
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 243/494 (49%), Gaps = 72/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQAKLGEHDFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ + + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GID--GSEEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIAAHLRKIE---KPA 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG GD I+A G G+ +L + AL P E
Sbjct: 114 MLVVNKVDGIDPD-----AASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTS-PEDDESKL-----------------PLQLAIVGRPNVGKS 338
+++ D + +D+T ++DE KL P+++AI+GRPNVGKS
Sbjct: 165 KMIEDQ--KGEGEIEDLTDFIDEDEEKLDYTEEEAEEEFKRLQDQPIKMAIIGRPNVGKS 222
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R+ + SV+
Sbjct: 223 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVV 282
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 KTLKAIEDANVVLLVIDARENISDQDLSLLGFALNSGRSIVLAVNKWD--------GLNN 334
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y R+ TS L R +
Sbjct: 335 DVKEQVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIM 394
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + K L D+ RFL
Sbjct: 395 KNATDDH-------QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVKELPDSYKRFLMNY 447
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 448 YRKSLEIMGTPIRI 461
>gi|319779671|ref|YP_004130584.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
gi|397661898|ref|YP_006502598.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
gi|317109695|gb|ADU92441.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
gi|394350077|gb|AFN35991.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
Length = 452
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 244/471 (51%), Gaps = 46/471 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R A+V + +TRD G ++GD F V+D+ G
Sbjct: 5 PVIALVGRPNVGKSTLFNRLTRSRNAIVADYSG--LTRDRHYGEGRIGDRPFLVIDTGGF 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + +G IL A T ++++ IF++D RSG++ D ++ LRK + ++A
Sbjct: 63 EPKVKTG-ILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVG--VPVLLA 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E L A AE LG G+P+AIS+ G G+ L D L +
Sbjct: 120 VNKAEGLQPNQ-----ANAEFHELGLGEPLAISSAHGDGVANLI--------DIALSKIP 166
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
S + NS P+ D+ + ++LAIVGRPNVGKSTL+N+L+ E RV+ G
Sbjct: 167 QSEEELNSE------PDADQEFTDHKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGT 220
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRD++ + FE+ + L+DTAG +R + + SV+++ + + +VV LVLDA+
Sbjct: 221 TRDAIEIDFEHNNKKYKLIDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQS 280
Query: 417 EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ +E GR LVV +NK D L + ++ V +E + + ++
Sbjct: 281 EISEQDAHIAGFILESGRALVVAINKWD--------GLDEDKRDWVIREFERKLRFLSFA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIK 526
V F SAL+ +G +++ V ++ +LPT +L R L+ + + + +PK++
Sbjct: 333 KVHFISALKSQGIKSLLKSVNLAHEAAFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMR 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP + + + D+ R+L ++ F L G P+RI +S
Sbjct: 393 YAHQGGQNPPLVIIHGNALDAIPDSYRRYLETRFRKAFKLEGTPLRIEFKS 443
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 85 EDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRR 144
E+ + EP+ D DHK+K + I+GRPNVGKS L N LI +
Sbjct: 170 EELNSEPDADQEFTDHKIK-------------------LAIVGRPNVGKSTLINSLIGEQ 210
Query: 145 EALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGM-TANVLAK 203
+ ++ P TRD E + + ++K++D+AGL +++ + + T +
Sbjct: 211 RVIAFDLPG--TTRDAIEIDFEHNNKKYKLIDTAGLRKRGRVFESIEKFSVIKTLQAIEA 268
Query: 204 TQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 247
+ ++D +S + D + ++ + + +VA+NK + L
Sbjct: 269 CNVVVLVLDAQSEISEQDAHIAGFILESGRAL--VVAINKWDGL 310
>gi|350571830|ref|ZP_08940146.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
gi|349791015|gb|EGZ44908.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
Length = 486
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 240/468 (51%), Gaps = 53/468 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ PT+ ++GRPNVGKS LFNRL R ++ALV + P +TRD G K+G + V+D+
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVADMPG--LTRDRHYGHGKVGSKPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + +F++D R+GL P D + LR+ +P+
Sbjct: 59 GFEPVVDSG-ILHEMAKHTLQAIDEADAVVFLVDGRTGLTPQDKIIADRLRQSP---RPV 114
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+A+NK E + AAE L GDP +S G G+ L +ED + +
Sbjct: 115 FLAVNKGEGANRSV-----LAAEFYELALGDPYVVSGAHGDGVYGL-------IEDVLEK 162
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ T+ + +K P+ A++GRPNVGKSTL+NA+L E+RV+ AG
Sbjct: 163 FPHAEETE-------------EIAKHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAG 208
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ + FE +G+ ++DTAG +R K E+ SV+++ + + ++V LVLDA+
Sbjct: 209 TTRDSIHIDFEREGKPFTIIDTAGVRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQ 268
Query: 417 EV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ A+E GR LVV VNK D + + K + ++I + +
Sbjct: 269 QDIADQDATIAGFALEAGRALVVAVNKWDDIDEDR--------KAQIKRDIARKLYFLDF 320
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKI 525
+ SAL+ +G + + Y +++PT ++ R L+ + R + +PK+
Sbjct: 321 AKFHYISALKEKGIDGLFASIQAAYDAAMIKMPTPKITRVLQSAIERQAPPRAGLVRPKM 380
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+Y Q PP V + + + +A R+LT++ ++ F+L G P+RI
Sbjct: 381 RYAHQGGMNPPVIVIHGNALQHIPEAYTRYLTQTFRKAFNLQGTPLRI 428
>gi|172035176|ref|YP_001801677.1| GTP-binding protein EngA [Cyanothece sp. ATCC 51142]
gi|354555681|ref|ZP_08974981.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
gi|226706247|sp|B1X0B0.1|DER_CYAA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171696630|gb|ACB49611.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
gi|353552331|gb|EHC21727.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
Length = 452
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 243/473 (51%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + R+A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQP--GITRDRTYRPAFWCDRDFQVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A L + AIF++D + G D E+ WLR+ ++ +
Sbjct: 61 LVFDDDTEFLPLIREQAMAA--LTEASAAIFVVDGQLGPTAGDREISDWLRRQ--KVPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P IS G G EL + L
Sbjct: 117 LAVNKCESPEMGLIQ----AAEFWELGLGEPYPISGIHGSGTGELLDQL----------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ SP++ + + ++I+GRPNVGKS+LLNA L E R +V P +G
Sbjct: 162 -----------ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGEQRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD++ E T L+DTAG ++R+K G S+ ++ K + RA VV LV+DA
Sbjct: 211 TRDAIDTVVERGDNTYRLIDTAG-IRRKKNVNYGAEFFSINRAFKAIRRADVVLLVIDAI 269
Query: 416 -----EEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++ R ++EGR +++VNK D + + + +Y Q++ + +
Sbjct: 270 DGVTDQDIKLADRIIDEGRAAIIVVNKWDAVE-KDSYTIYD-----YKQKVMDRLYFMEW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDT-YQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ TS +N L + + HS Q Q
Sbjct: 324 ADIIFVSAMSGK-RVENIFELVDVAVEEHRRRVNTSVVNEVLEEAVKWHSPPTTKQGKQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV ++PPT F++ K +D R++ + +E G PIR+ R
Sbjct: 383 RIYYGTQVSSQPPTIALFVNDPKRFNDNYRRYIERQFREQIGFPGTPIRLLWR 435
>gi|339477885|ref|YP_004706705.1| 50S ribosomal subunit stability factor [Candidatus Moranella
endobia PCIT]
gi|338172436|gb|AEI74837.1| 50S ribosomal subunit stability factor [Candidatus Moranella
endobia PCIT]
Length = 489
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 242/480 (50%), Gaps = 52/480 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL +ALV + P +TRD + G AK D F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTLTCDALVVDCPG--LTRDRKYGRAKWKDKEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKH 231
G++ D+ G+ AN+ +T AI F++D R+GL DL + K LRK
Sbjct: 59 GIDD--------DQIKGIAANIARQTLLAIEEADIVLFIVDGRAGLMAADLVIAKHLRK- 109
Query: 232 APQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
Q +V NK E + + A ++ LG G+ + ISA G G+ L E + +
Sbjct: 110 -SQKNTVVIANKTEGIAKDS-----AMSDFYALGMGNIVPISASHGTGINYLREQIILPL 163
Query: 292 EDYMLRVLN-DSCTQNNSSTQDVTSPED---DESKLPLQLAIVGRPNVGKSTLLNALLQE 347
+ L+V + + + T+ + E+ ++ P++LAI+GRPNVGKSTL+N L+ E
Sbjct: 164 VNACLQVEDAEKWLYEEAKTETLAVQENQLFNQQSQPIKLAIIGRPNVGKSTLINRLVGE 223
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRA 406
+RV+V G TRDS+ V + G+ L+DTAG +R K G SV+++ + + A
Sbjct: 224 ERVIVYDMPGTTRDSIYVPMVHDGQQYLLIDTAGVRKRRKVTGKVEKFSVIKTIQAIEDA 283
Query: 407 HVVALVLDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
+VV LVLDA + + + +GR LV+ VNK D +S ++ ++ + +
Sbjct: 284 NVVLLVLDAHQCISDQDLSLLGLIINKGRSLVIAVNKWDGMSSKK--------RDVLKET 335
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS- 515
+ + + V F SAL RG + V + YQ R+ T+ L R + + H
Sbjct: 336 LNNSLGFINFARVHFISALHDRGVGNLFESVNEAYQCATKRVSTAMLTRIMYMAVAEHQP 395
Query: 516 --WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + +P KY PP FV + L+D+ R+L + ++ G PIR+
Sbjct: 396 PLVRGRRVKP--KYAHAGGYNPPIFVIHGTQVTDLTDSYKRYLINYFRRSLNIMGTPIRM 453
>gi|88809283|ref|ZP_01124792.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
gi|88787225|gb|EAR18383.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
Length = 455
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 233/491 (47%), Gaps = 60/491 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL REA+V++ P VTRD D FKV+D+ GL
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEP--GVTRDRTYQDGYWSDREFKVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+ S L A L + A+ ++D + G+ D + ++LR + ++A
Sbjct: 62 VFDDDS-EFLPEIREQAALALEEASVALVIVDGQQGVTASDEAIAEFLRGQ--RCPALLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NKCES G AAE LG G+P ISA G G EL D +L L
Sbjct: 119 VNKCESPEQGLA----MAAEFWSLGLGEPYPISAIHGAGTAELL--------DQVLTYLP 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ +S P+QLAI+GRPNVGKS+LLNA+ E R +V P G TR
Sbjct: 167 PKSQEGDSEE-------------PIQLAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ + R LVDTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 214 DTIDTSLVRENRPWRLVDTAGIRRRRSVSYGPEFFGINRSFKAIERSDVCVLVIDALDGV 273
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
R E+GR VV+VNK D + ++ A+ + ++ + + P+
Sbjct: 274 TEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTM------PAMEKGLRAKLYFLDWAPM 327
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QPK 524
+FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q +
Sbjct: 328 LFTSALTGQRVDSIFALAALAVEQHRRRVSTSVVNEVLKEAL---SWRSPPTTRGGRQGR 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI-----TQRSVP 579
+ Y TQV +RPP+F F++ K D R++ + ++E G P+++ QR
Sbjct: 385 LYYGTQVASRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFDGTPLKLFWRGKQQRDAE 444
Query: 580 RKCGSSSSRQN 590
R +RQ
Sbjct: 445 RDLARQQNRQG 455
>gi|302808277|ref|XP_002985833.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
gi|300146340|gb|EFJ13010.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
Length = 492
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 258/515 (50%), Gaps = 76/515 (14%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDS 177
+LLP V I+GRPNVGKSALFNR++ R A+V++ P VTRD G + F ++D+
Sbjct: 7 HLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEP--GVTRDRLYGRVRGSVQEFMLIDT 64
Query: 178 AG---LETEATSG---------------------SILDRTAGMTANVLAKTQFAIFMIDV 213
G + T A SG S++++ A A+ + + +F++D
Sbjct: 65 GGVLTIPTSAESGLAGGSVAAAQAKKDAAAAGLPSMIEQQA---ASAVEEACALVFVVDG 121
Query: 214 RSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAIS 273
++GL D+E+G WLR+ K +A+NKCES G AAE LGF P+ +S
Sbjct: 122 QAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQ----AAEFWSLGF-TPVPVS 176
Query: 274 AETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRP 333
A +G G+ +L E + ++++ QD E E PL +AI+GRP
Sbjct: 177 AISGSGVPDLLEDVTSAIKE----------------KQD--ELEASEGDRPLSVAIIGRP 218
Query: 334 NVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY-QGRTVYLVDTAGWLQREKEKGPA 392
NVGKS++LNA++ ++R +V P +G TRD++ +G+ L+DTAG +R
Sbjct: 219 NVGKSSILNAIVGKERTIVSPVSGTTRDAIDTEVTGPEGKVFRLIDTAGIRKRAAIASGG 278
Query: 393 ----SLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLS 438
SL V + + + RA VVALV++A R ++G+ +++VNK D +
Sbjct: 279 SKTESLCVQSALRAIRRADVVALVIEAMTCATEQDYRLGERIEKDGKACIIVVNKWDTVP 338
Query: 439 GRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRL 498
+ + Y +++ + + P+V+TSA G+ ++ + Q+ R+
Sbjct: 339 DKNAESTY-----WYDMDVREKLRVLKWAPIVYTSATSGQRVQKILATALSAGQERERRI 393
Query: 499 PTSRLNRWLRKV--MGRHSWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFL 556
T+ LN+ ++ M + + ++ + TQ RPPTFV F++ +K D R++
Sbjct: 394 STAILNQVVQDAINMKQPPTTRGGRKGRLYFCTQATTRPPTFVFFVNDEKLFPDDYKRYM 453
Query: 557 TKSLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNT 591
K L+++ G PIR+ RS ++ S+Q+T
Sbjct: 454 EKQLRQNIGFPGTPIRLFWRS--KRLARPGSKQST 486
>gi|237732490|ref|ZP_04562971.1| GTP-binding protein EngA [Citrobacter sp. 30_2]
gi|226908029|gb|EEH93947.1| GTP-binding protein EngA [Citrobacter sp. 30_2]
Length = 504
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 234/482 (48%), Gaps = 38/482 (7%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEIEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRP 289
Q + NK + L A + LG G+ I+A G G+ L E L P
Sbjct: 123 R--QKPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLP 175
Query: 290 SVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNA 343
++D + D Q + PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 176 WMDDVAPQEEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNR 235
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L EDRV+V G TRDS+ + + R L+DTAG +R K + SV+++ +
Sbjct: 236 ILGEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQA 295
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D L + VKE
Sbjct: 296 IEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQ 347
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 348 VKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVE 407
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H + + K+KY PP V + K L D+ R+L ++ D+ G PI
Sbjct: 408 DHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPI 467
Query: 572 RI 573
RI
Sbjct: 468 RI 469
>gi|256828007|ref|YP_003156735.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028]
gi|256577183|gb|ACU88319.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028]
Length = 445
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 246/476 (51%), Gaps = 61/476 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V +IGRPNVGKS LFNRLI+RR ++ ++ VTRD + + ++D+ G
Sbjct: 5 LPMVALIGRPNVGKSTLFNRLIKRRVSITHDMAG--VTRDSIFSEVRGETRTYMLIDTGG 62
Query: 180 LETEATSG---SILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
L +++ SI D+ +A +F++D R+GLHP D +VG++LR+ +++
Sbjct: 63 LVPDSSDEIEISIFDQAR----EAMAGADLILFIVDGRTGLHPQDEQVGQYLRQSGKEVR 118
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPI-AISAETGLGMTELYEALRPSVEDYM 295
+V NK +G AA+ LGF P+ +SA G GM +L E + ++
Sbjct: 119 VLV--NKV----DGPEQEETLAADFYSLGF--PLQCVSASHGFGMGDLREMIETALP--- 167
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
D C ++V P+ L++A++GRPN GKS+ +NALL + R++V E
Sbjct: 168 ----KDEC-------ENVEQPQGG-----LKIALLGRPNAGKSSTINALLGKKRLMVSAE 211
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALV 412
AG TRD V V + G+T VDTAG R K K SL SV+ S + +A VV LV
Sbjct: 212 AGTTRDCVDVTVQRGGKTYTFVDTAGV--RRKSKVIDSLEYFSVVHSMQAAKQADVVVLV 269
Query: 413 LDAEEVRAVEEGRGL----------VVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LD + ++ R L V++VNK+DLLS Q L K K+ V Q
Sbjct: 270 LDIMDGVVGQDKRLLSFLDTEKVPFVIVVNKIDLLSKDQ---LAKTKKDLVDQ-----FA 321
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA- 521
+PV+++S++ G ++ + +++ R+ T LNR ++ V RH
Sbjct: 322 FCAHVPVLYSSSVSMAGLGGLLPLIEKLWEQCGQRVTTGELNRLVKMVTERHQPPVMGGR 381
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ KI Y TQ +RPPTFV F++ +K + +R+L L++ F + PIR+ RS
Sbjct: 382 RGKIYYMTQADSRPPTFVFFVNDEKLFHGSYVRYLENQLRKVFRMDKTPIRMVFRS 437
>gi|427739309|ref|YP_007058853.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
gi|427374350|gb|AFY58306.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
Length = 456
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 242/490 (49%), Gaps = 52/490 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL +++ A+V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAKQQSAIVHDEPG--VTRDRTYLSAFWRDREFMVVDTGG 60
Query: 180 L-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T R M A L++ AIF++D ++G P DLE+ +WLR H + +
Sbjct: 61 LIFNDDTEFLPFIRQQAMVA--LSEASAAIFVVDGQTGATPADLEIAEWLRHHP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AA+ LG G+P +S G G EL D ++
Sbjct: 117 LAVNKCESPDQGLM----LAADFWQLGLGEPYPMSGIHGNGTGELL--------DELINF 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L +VT E+ +++AI+GRPNVGKS+LLN+ E+R +V P +G
Sbjct: 165 L--------PPVSEVTQDEE------IKIAIIGRPNVGKSSLLNSFAGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E + L+DTAG +++ + G S+ ++ K + R+ VV V+DA +
Sbjct: 211 TRDAIDTFIEKDEQVYRLIDTAGIRKKKNIDYGTEFFSINRAFKAIRRSDVVLFVIDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R ++EGR + +VNK D + + ++Y K + +
Sbjct: 271 GITDQDQKLAGRIIDEGRACITVVNKWDAYE-KDSYSVYDYQK-----YLSGRLHFSDWS 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
+F SAL G+ + ++ V ++ R+ TS +N L + + HS Q +I
Sbjct: 325 ETIFVSALTGQRVLKILDLVNQAIEQHRRRVSTSVINEVLEEAVRWHSPPASRSGKQGRI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSS 585
Y TQV +PPT F++ +K +D R++ + +E G PIR+ RS + S
Sbjct: 385 YYGTQVSTQPPTIALFVNEEKRFNDNYRRYIERQFREQLGFRGTPIRLLWRSKKVRETES 444
Query: 586 SSRQNTGQKV 595
+ R N KV
Sbjct: 445 NVRANRATKV 454
>gi|384439022|ref|YP_005653746.1| Small GTP-binding protein [Thermus sp. CCB_US3_UF1]
gi|359290155|gb|AEV15672.1| Small GTP-binding protein [Thermus sp. CCB_US3_UF1]
Length = 444
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 236/465 (50%), Gaps = 53/465 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+ +R A+V + P VTRD++EG+ + RF ++D+ GL
Sbjct: 16 VVIVGRPNVGKSSLFNRLLGKRSAVVADVPG--VTRDLKEGVVETDRGRFLLVDTGGL-- 71
Query: 183 EATSGSILDRTAGMTAN-VLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG ++ + L + +F +D R+ L D EV ++LRK KP+V +
Sbjct: 72 --WSGDHWEKKIQEKVDQALESAELVLFAVDGRAELTQADYEVAEYLRKKG---KPVVLV 126
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
L A LGFGDPI S+ G+ L EA+ +
Sbjct: 127 ATKVDDPKHEAYLGPLYA----LGFGDPIPTSSAHARGLEALLEAIWAKL---------- 172
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
V E + ++LAIVGRPN GKS+LLNA+L E+RV+V E G TRD
Sbjct: 173 ----------PVRQIESEPEVAAIRLAIVGRPNAGKSSLLNAILGEERVIVSEEPGTTRD 222
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
++ V F + G LVDTAG +++ E L++ +S + + A VV LV+D +V
Sbjct: 223 AIDVEFFFGGHRFVLVDTAG-IRKRPESLVEELAIGRSLRAMAEADVVLLVVDPFQVGDR 281
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
+A+EEG+ +++++ K DL+ + S + + ++E + + +P V+T
Sbjct: 282 ELKLANQAMEEGKPVLLVITKWDLVGKEEASKVRRGLREK--------LIHLDHLPRVYT 333
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
SA + + + + ++ R+PTS LNRWL + + +P K+ Y TQ
Sbjct: 334 SAFTRQNLDRIFAEAVRLHELSHTRVPTSELNRWLSVWTAKVQLPNFKGRPLKLLYATQP 393
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ PPTFV F++ + ++ A +L + ED L IP R+ R
Sbjct: 394 EVAPPTFVFFVNHPEFVTRAFENYLRNRIGEDLGLKEIPFRLVFR 438
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL + +V G+TRD E LVDT G
Sbjct: 15 KVVIVGRPNVGKSSLFNRLLGKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 74
Query: 382 --WLQREKEKGPASLS-------VMQSRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIVN 432
W ++ +EK +L + R L +A AE +R ++G+ +V++
Sbjct: 75 DHWEKKIQEKVDQALESAELVLFAVDGRAELTQADYEV----AEYLR--KKGKPVVLVAT 128
Query: 433 KMD 435
K+D
Sbjct: 129 KVD 131
>gi|169824551|ref|YP_001692162.1| GTP-binding protein [Finegoldia magna ATCC 29328]
gi|417926173|ref|ZP_12569581.1| ribosome-associated GTPase EngA [Finegoldia magna
SY403409CC001050417]
gi|238687753|sp|B0S1N2.1|DER_FINM2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|167831356|dbj|BAG08272.1| GTP-binding protein [Finegoldia magna ATCC 29328]
gi|341589986|gb|EGS33239.1| ribosome-associated GTPase EngA [Finegoldia magna
SY403409CC001050417]
Length = 438
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 242/471 (51%), Gaps = 63/471 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GR NVGKS LFN+LI++R A+ + P VTRD A+ + F V+D+ GL
Sbjct: 4 PVVAIVGRANVGKSTLFNKLIKKRIAITQDDP--GVTRDRLYMEAEWQNKYFTVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAP 233
E + S I+ T N+ +T+ AI FM+D + G+ P+D+EV LR+
Sbjct: 62 EPK--SNEII------TKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADMLRRTKK 113
Query: 234 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
+ I+ +NK + + + LGF + ISA +G+ +L EA+ +D
Sbjct: 114 SV--ILVVNKIDHIKQQDN-----VYDFYNLGFYEIFPISASNSMGLGDLLEAVVSKFDD 166
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
NS+T+ +DD +K+ L +G+PNVGKS+L+N LL E+R++V
Sbjct: 167 -------------NSNTE----SDDDITKVCL----IGKPNVGKSSLINNLLNEERMIVT 205
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
AG TRD++ Y+G +DTAG +R+K + SV+++ + R+ + L+
Sbjct: 206 DIAGTTRDAIDSKINYKGNEYIFIDTAGLRKRKKIDTEVERYSVVRTLSAIDRSDICVLM 265
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+DA E A ++G+ ++++VNK DL+ + N+ ++I+T +
Sbjct: 266 IDATEGVSEQDTKILGYAHDQGKAMIILVNKWDLVEKQTNTM------NDFKKDIRTKLG 319
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSA 521
V +P+VF S E + + ++ + +R+ T LN + K V+ D+
Sbjct: 320 FVMYVPIVFISVKENKRIDTLFTEIEKVDNNYSMRISTGVLNDVISKAVLLNPPPSDKGV 379
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
+ KI Y TQ++ARPP F+ F++ + + R++ L+E+F G+P++
Sbjct: 380 RLKIFYITQIEARPPKFLVFINRNDLMHFSYQRYIENQLRENFSFEGVPLQ 430
>gi|30248179|ref|NP_840249.1| GTP-binding protein EngA [Nitrosomonas europaea ATCC 19718]
gi|37999533|sp|Q82XU6.1|DER_NITEU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|30180064|emb|CAD84064.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
[Nitrosomonas europaea ATCC 19718]
Length = 467
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 236/475 (49%), Gaps = 60/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+A+V + P +TRD G +LG + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPG--LTRDRHYGHGRLGLKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E SG IL A T + + +F++D R GL D + + LRK +I I+
Sbjct: 61 EPVVKSG-ILHAMAKQTLQAVDEADIVLFIVDGRQGLAAQDKIIAEQLRKTGQKI--ILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + + AE LG G P A+SA G + EL + ++E Y
Sbjct: 118 VNKTEGM-----PYSSVTAEFHELGLGTPCAVSALHGDHLGELIDF---ALEGY------ 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ T+ E + K P+ +AI GRPNVGKSTL+N LL E+RV+ + G TR
Sbjct: 164 --------PYEEETAAEPGQEKCPV-IAIAGRPNVGKSTLINTLLGEERVIAFDQPGTTR 214
Query: 361 DSVRVHFEYQGRTVYLVDTAG-------WLQREKEKGPASLSVMQSRKNLMRAHVVALVL 413
DS+ V FEY R+ L+DTAG W EK SV+++ +++ A+VV LVL
Sbjct: 215 DSIYVDFEYGQRSYTLIDTAGLRRSGKVWETVEK------FSVVKTLQSIEAANVVILVL 268
Query: 414 DAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + +E GR LVV +NK D L Q +E + +E + +
Sbjct: 269 DAHHEISDQDAHIAGFILETGRSLVVAINKWDGLDDYQ--------REIIKREFERKLGF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQ 522
++ + + SAL G G +M V Y +PT +L R L V + + ++
Sbjct: 321 LSFANLHYISALYGNGVKGLMPSVDAAYAAARAHIPTPKLTRAMLAAVAKQQPPRGGMSR 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + S + + R+L + +E F L G P+R+ R+
Sbjct: 381 PKLRYAHQGGENPPLIIVHGSMLEHVPQTYRRYLENTFREVFKLKGTPLRVEFRT 435
>gi|402834205|ref|ZP_10882809.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
gi|402278784|gb|EJU27839.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
Length = 442
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 239/469 (50%), Gaps = 50/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L R+R ++V + P VTRD A+ F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLP--GVTRDRIYLDAEWLGKEFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + TS +IL + + +F++D R+GL D EVGK LR KP++
Sbjct: 62 ELD-TSDAILRSMRQQAQIAMEEADVILFLVDGRAGLTLADEEVGKMLRTTK---KPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S E LG GDP+ ISA + + +L +AL + +
Sbjct: 118 AVNKIDSPKQ-----EADVYEFYNLGLGDPVPISATNAMNLGDLLDAL--------VALF 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + S + + +A++GRPNVGKS+L+NALL E+RV+V AG T
Sbjct: 165 PEGAEEEKESDE-------------ISIAVIGRPNVGKSSLVNALLGEERVIVSDVAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA--- 415
RD++ HF + L+DTAG ++ K P SVM++ + + RA VV +VLDA
Sbjct: 212 RDAIDTHFMAEDTKFILIDTAGMRRKGKIDAPIERYSVMRALRAVDRADVVLVVLDATAG 271
Query: 416 --EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E+ + + E G+ +V+IVNK D+ + + + E++ + + P
Sbjct: 272 ITEQDKKIAGYAHESGKAVVLIVNKWDIYENKDEKSTLR-----FTDELRIELGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V++TSAL + V V + +R+ TS LN +R ++ + + Q KI+Y
Sbjct: 327 VLYTSALTHQRVARVTDLVKYVADQASMRVKTSILNDLVRDMIAVNPPPAHKGKQLKIRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ RPP F+ F++ + + + LR++ L+E F G P+R+ R
Sbjct: 387 MTQADIRPPKFIVFVNEPELMHFSYLRYIENKLRESFGFEGTPLRLIVR 435
>gi|423064932|ref|ZP_17053722.1| small GTP-binding protein [Arthrospira platensis C1]
gi|406714175|gb|EKD09343.1| small GTP-binding protein [Arthrospira platensis C1]
Length = 453
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 243/473 (51%), Gaps = 58/473 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL + ++A+V++ P +TRD A D F V+D+ GL
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQP--GMTRDRTYRSAYWQDREFTVVDTGGL 61
Query: 181 ETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ + + L R + A L + AIF++D ++G D + WLR+ ++ ++
Sbjct: 62 VFDDDTEFLPLIREQALIA--LGEATAAIFVVDGQTGPTGGDEAIASWLRQQ--KVPILL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AA+ LG G+P IS+ G G EL +AL
Sbjct: 118 AVNKCESPTQGLTQ----AAQFWELGLGNPFPISSIHGSGTGELLDAL------------ 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+++ + D+E L++AIVGRPNVGKS+LLN L ++R +V P +G T
Sbjct: 162 ----------IENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD++ E+ G T LVDTAG ++R+K E G + ++ K + RA VV V+DA E
Sbjct: 212 RDAIDTIVEHNGNTYRLVDTAG-IRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVTG 466
R ++GR V++VNK D + + L Y++V +++ + +
Sbjct: 271 GVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKV-------MRSRLYFLDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ TS +N + + + HS Q Q
Sbjct: 324 ADMIFVSAMTGQ-RVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV + PPT V F++ K D R++ ++ G PIR+ R
Sbjct: 383 KIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWR 435
>gi|219850590|ref|YP_002465023.1| GTP-binding protein EngA [Chloroflexus aggregans DSM 9485]
gi|254783144|sp|B8GAY7.1|DER_CHLAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219544849|gb|ACL26587.1| small GTP-binding protein [Chloroflexus aggregans DSM 9485]
Length = 449
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 236/480 (49%), Gaps = 56/480 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS FNRLI R A+V + P TRD G F V+D+AGL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDIPG--TTRDRLYGDTFWNGREFTVVDTAGL 61
Query: 181 -----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ I RT + +A+ IFM+D R GL D +V LR A
Sbjct: 62 LFGDEDPSLPEVEIARRTRVQAEHAIAEADAIIFMVDGRDGLTTADADVADILRTTA--- 118
Query: 236 KPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+V A+NKC+S A E L GDPI +SA GLG ++ + L E +
Sbjct: 119 KPVVLAVNKCDSQERMLD-----AVEFYALNLGDPIPMSAFHGLGTGDVLDRL---TEYF 170
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ E DE + L++AIVGRPNVGKS+LLN LL ++R +V P
Sbjct: 171 PPKTF-----------------EKDEER-HLRVAIVGRPNVGKSSLLNRLLGKERSVVSP 212
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD + Y G + L+DTAG + K E+G SV+++ + + R V L++
Sbjct: 213 IPGTTRDPIDTTITYYGEPITLIDTAGIRRAGKIERGIEKYSVLRTLRAIERCDVAMLLV 272
Query: 414 DAEE-VRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E V A +E +GL+++VNK D ++ ++S Y + V + +
Sbjct: 273 DATEGVTAQDTHIAGMVIEAKKGLILVVNKWDAIT--KDSQTYYEFEHRVREAFKF---- 326
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSA 521
V P+VF SAL G+ ++ + Y + R+PTS LN +LR+V+ + + A
Sbjct: 327 VDYAPIVFISALTGQRVSHLLDYAREIYAQRQKRIPTSELNNFLREVVVQQPPMAVKKGA 386
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y Q + PP F+ F + + + + R+L L+E + G PI I RS RK
Sbjct: 387 HLRLYYAVQPQTEPPVFLFFANDSELVHWSYARYLENRLRERYGFQGTPIVIVFRSRERK 446
>gi|399114892|emb|CCG17688.1| GTPp-binding protein EngA [Taylorella equigenitalis 14/56]
Length = 452
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 243/471 (51%), Gaps = 46/471 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R A+V + +TRD G ++GD F V+D+ G
Sbjct: 5 PVIALVGRPNVGKSTLFNRLTRSRNAIVADYSG--LTRDRHYGEGRIGDRPFLVIDTGGF 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + +G IL A T ++++ IF++D RSG++ D ++ LRK + ++A
Sbjct: 63 EPKVKTG-ILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVG--VPVLLA 119
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E L A AE LG G+P+AIS+ G G+ L D L +
Sbjct: 120 VNKAEGLQPNQ-----ANAEFHELGLGEPLAISSAHGDGVANLI--------DIALSKIP 166
Query: 301 DSCTQNNSSTQDVTSPEDDE--SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
S + NS P+ D + ++LAIVGRPNVGKSTL+N+L+ E RV+ G
Sbjct: 167 QSEEELNSE------PDADREFTDHKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGT 220
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRD++ + FE+ + L+DTAG +R + + SV+++ + + +VV LVLDA+
Sbjct: 221 TRDAIEIDFEHNNKKYKLIDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQS 280
Query: 417 EVRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ +E GR LVV +NK D L + ++ V +E + + ++
Sbjct: 281 EISEQDAHIAGFILESGRALVVAINKWD--------GLDEDKRDWVIREFERKLRFLSFA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIK 526
V F SAL+ +G +++ V ++ +LPT +L R L+ + + + +PK++
Sbjct: 333 KVHFISALKSQGIKSLLKSVNLAHEAAFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMR 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP + + + D+ R+L ++ F L G P+RI +S
Sbjct: 393 YAHQGGQNPPLVIIHGNALDAIPDSYRRYLETRFRKAFKLEGTPLRIEFKS 443
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 85 EDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRR 144
E+ + EP+ D DHK+K + I+GRPNVGKS L N LI +
Sbjct: 170 EELNSEPDADREFTDHKIK-------------------LAIVGRPNVGKSTLINSLIGEQ 210
Query: 145 EALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGM-TANVLAK 203
+ ++ P TRD E + + ++K++D+AGL +++ + + T +
Sbjct: 211 RVIAFDLPG--TTRDAIEIDFEHNNKKYKLIDTAGLRKRGRVFESIEKFSVIKTLQAIEA 268
Query: 204 TQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESL 247
+ ++D +S + D + ++ + + +VA+NK + L
Sbjct: 269 CNVVVLVLDAQSEISEQDAHIAGFILESGRAL--VVAINKWDGL 310
>gi|237654043|ref|YP_002890357.1| GTP-binding protein EngA [Thauera sp. MZ1T]
gi|237625290|gb|ACR01980.1| small GTP-binding protein [Thauera sp. MZ1T]
Length = 442
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 236/471 (50%), Gaps = 54/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+ALV + P +TRD G+ ++GD + V+D+AG
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTRTRDALVADQPG--LTRDRHYGIGRVGDRDYLVVDTAGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
+ A G I+ A +A+ +F++D R+G P D + LR+ +P+ V
Sbjct: 61 DPVAKDG-IMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDENIAARLRRAG---RPVHV 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRV 298
+NK E + A AA+ LG GDP+ +SA G G+ +L E L P D
Sbjct: 117 VVNKAEGIDR-----AMVAADFHALGLGDPLPVSAAHGDGVKQLVELVLAPFPAD----- 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D DDE ++AIVGRPNVGKSTL+N LL E+RV+ G
Sbjct: 167 -------------DEKEHSDDEGP---KVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + FE G+ L+DTAG +R K + SV+++ + + +VV LVLDA +
Sbjct: 211 TRDAISIPFERGGKRYTLIDTAGLRRRGKVFEAVEKFSVIKTLQAVQECNVVVLVLDAAQ 270
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A+E GR LVV +NK D + Y+R + + +I + ++
Sbjct: 271 DISDQDAHIAGFALEAGRALVVAINKWDAVDD------YRR--DRLKADIARKLAFLSFA 322
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIK 526
SAL+ G ++ V Y L T RL R L++ + R + A+PK++
Sbjct: 323 RFHQISALKAEGIAGLLKSVDAAYAAATANLATPRLTRALQQAVARQAPPRHGLARPKMR 382
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + + + +R+L + + FDL G P+RI R+
Sbjct: 383 YAHQGGMNPPVIVIHGNALDDIPQSYVRYLERCFMDAFDLKGTPLRIQFRT 433
>gi|302380361|ref|ZP_07268831.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3]
gi|303233791|ref|ZP_07320445.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4]
gi|302311851|gb|EFK93862.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3]
gi|302495225|gb|EFL54977.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4]
Length = 438
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 242/471 (51%), Gaps = 63/471 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GR NVGKS LFN+LI++R A+ + P VTRD A+ + F V+D+ GL
Sbjct: 4 PVVAIVGRANVGKSTLFNKLIKKRIAITQDDP--GVTRDRLYMEAEWQNKYFTVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAP 233
E + S I+ T N+ +T+ AI FM+D + G+ P+D+EV LR+
Sbjct: 62 EPK--SNEII------TKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADMLRRTKK 113
Query: 234 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
+ I+ +NK + + + LGF + ISA +G+ +L EA+ +D
Sbjct: 114 SV--ILVVNKIDHIKQQDN-----VYDFYNLGFYEIFPISASNSMGLGDLLEAVVSKFDD 166
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
NS+T+ +DD +K+ L +G+PNVGKS+L+N LL E+R++V
Sbjct: 167 -------------NSNTE----SDDDITKVCL----IGKPNVGKSSLINNLLNEERMIVT 205
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
AG TRD++ Y+G +DTAG +R+K + SV+++ + R+ + L+
Sbjct: 206 DIAGTTRDAIDSKINYKGNEYVFIDTAGLRKRKKIDTEVERYSVVRTLSAIDRSDICVLM 265
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+DA E A ++G+ ++++VNK DL+ + N+ ++I+T +
Sbjct: 266 IDATEGVSEQDTKILGYAHDQGKAMIILVNKWDLVEKQTNTM------NDFKKDIRTKLG 319
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSA 521
V +P+VF S E + + ++ + +R+ T LN + K V+ D+
Sbjct: 320 FVMYVPIVFISVKENKRIDTLFTEIEKVDNNYSMRISTGVLNDVISKAVLLNPPPSDKGV 379
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
+ KI Y TQ++ARPP F+ F++ + + R++ L+E+F G+P++
Sbjct: 380 RLKIFYITQIEARPPKFLVFINRNDLMHFSYQRYIENQLRENFSFEGVPLQ 430
>gi|284929084|ref|YP_003421606.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
gi|284809543|gb|ADB95248.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
Length = 452
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 243/472 (51%), Gaps = 60/472 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD--IREGLAKLGDLRFKVLDS 177
LP V +IGRPNVGKS L NRL + R+A+V++ P +TRD R+ + D F V+D+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAKNRQAIVHDEPG--ITRDRVYRQAFWRTHD--FLVVDT 58
Query: 178 AGLE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
GL + T L R MTA L++ A+F++D + G D E+G WLR+ ++
Sbjct: 59 GGLVFNDNTEFLPLIREQAMTA--LSEASVAVFVVDGQLGPTTGDYEIGNWLRQQ--KVP 114
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
++A+NKCES +G AA+ LG G+P IS G G E
Sbjct: 115 VLLAVNKCESPEHGLIQ----AAQFWELGLGEPYPISGIHGNGTGEFL------------ 158
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
D + S+ + PE+ + ++IVGRPNVGKS+LLNA L E R +V P A
Sbjct: 159 ----DKLILHLPSSNKMFDPEE------INVSIVGRPNVGKSSLLNAFLGEKRAIVSPIA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD + E +G+ LVDTAG ++R+K E G S+ ++ K + RA VV LV+D
Sbjct: 209 GTTRDVIDTIVERKGKVYRLVDTAG-IRRKKNVEYGAEFFSINRAFKAIRRADVVLLVID 267
Query: 415 A------EEV----RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++ R ++EGR +++VNK D + + +Y + + + + +
Sbjct: 268 AIDGVTEQDIKLADRIIDEGRSAIIVVNKWDAVE-KDAYTIY-----SYKKNVMNRLYFM 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSA 521
++F SA G+ RI + ++D ++ R+ TS +N L + + HS Q
Sbjct: 322 EWANLIFISAKSGQ-RIEKIFPLVDIAVKEHRRRINTSIINEVLEEAIRWHSPPTTRQGK 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q KI Y TQV +PPT V F++ K +D R++ ++ G PIR+
Sbjct: 381 QGKIYYGTQVSNQPPTIVLFVNDPKRFNDNYRRYIEGQFRQQIGFSGTPIRL 432
>gi|414075715|ref|YP_006995033.1| small GTP-binding protein [Anabaena sp. 90]
gi|413969131|gb|AFW93220.1| small GTP-binding protein [Anabaena sp. 90]
Length = 454
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 238/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL + A+V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPG--VTRDRTYRPAFWNDREFVVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T + R +TA L++ AIF++D ++GL P D E+ +WLR+ + +
Sbjct: 61 LVFNDDTEFLPMIRQQALTA--LSEACAAIFVVDGQAGLMPADEEISEWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P ISA G G E+ + L + +
Sbjct: 117 LAVNKCESPDQGVIQ----AAEFWELGLGEPFPISAIHGSGTGEILDELMNHIPLIV--- 169
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
E++E+K +++AI+GRPNVGKS+LLNA + E R +V P +G
Sbjct: 170 ------------------EEEENK-EIKVAIIGRPNVGKSSLLNAFVGEYRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E +T L+DTAG +++ E G S+ ++ K + R+ VV LV+DA +
Sbjct: 211 TRDTIDTVVERGDQTYRLIDTAGIRKKKHIEYGTEFFSINRAFKAIRRSDVVLLVIDAVD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EEGR V++VNK D + + + +Y K E+++ +
Sbjct: 271 GVTEQDQKLAGRVLEEGRACVIVVNKWDAVE-KDSYTIYDHAK-----ELESRLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
++ SA+ G+ ++ V + R+ TS +N L + HS Q KI
Sbjct: 325 DTIYVSAVTGQRVEKILELVNTAAEAHKRRVSTSVINEVLEDAISWHSPPTSRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV ++PP+ F++ +D R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVSSQPPSIALFVNDNTRFNDNYRRYIERQFRKQLGFQGTPIRLFWRS 436
>gi|302871345|ref|YP_003839981.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
gi|302574204|gb|ADL41995.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
Length = 440
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 235/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G A+ + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGEAEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IF++D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAIDMSDVIIFIVDGKTGLTDADKEVANMLRTSK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A V +Y+ V
Sbjct: 117 AVNKIDNI-----SQEPMIYEFYELGLSDPIAMSAEHGTGVGDVLDA----VVNYLDNVG 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ +N +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 168 INEIEENT-----------------IKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +V VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKVAGYAYEAGKGCIVAVNKWDAVEKDEKTA------DEYKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ V+ Y+ + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETVLYVYENYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVGEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|416249821|ref|ZP_11636918.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
gi|326575993|gb|EGE25916.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
Length = 472
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 236/471 (50%), Gaps = 53/471 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+++ P V +IGRPNVGKS LFN+L + R+ALV + +TRD + G A + F V+D
Sbjct: 1 MSIKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAG--LTRDRQYGDAHFENKSFIVVD 58
Query: 177 SAGL-ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ G+ E + SG+I D A + + + +F++D R+GL D E+ +L
Sbjct: 59 TGGIGEMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG--- 115
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ + NK + +H A AE LGFG+P A +A G G+T L E+L + +
Sbjct: 116 KPVFLVANKMDGVHEA------AYAEFFALGFGEPYATAASHGRGVTNLLESLTADMPED 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
M P+D+ L+LAI+GRPNVGKSTL+N LL EDRV+V
Sbjct: 170 M--------------------PKDELDSKTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFD 209
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRDS+ + FE +GR+ L+DTAG +R + ++ SV+++ + + A+VV +V+
Sbjct: 210 MPGTTRDSIYIPFEREGRSYVLIDTAGVRRRGRIDEKVEKFSVVKTLQAIKDANVVMVVI 269
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E A++ GR +VV +NK D LS Q K+ V EI
Sbjct: 270 DAKEGIVDQDLHMLGYALDAGRAIVVAINKWDGLSQDQ--------KDFVKIEIDRRFNF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
V + + SAL G G + + Y+ ++ T++L R L + H +
Sbjct: 322 VPWVKIHLISALYGNGVGKLYPSIHKAYEASMFKVSTNQLTRILEDAVASHPPPMVGGRR 381
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y PP V + +L + R+L + + L G P+++
Sbjct: 382 IKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRYLENVFRNVYKLEGTPLQV 432
>gi|161502327|ref|YP_001569439.1| GTP-binding protein EngA [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160863674|gb|ABX20297.1| hypothetical protein SARI_00360 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 504
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG GD I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGDIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q + +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDIAPQEEVDEDAEYWAQFEAEENSEEAPEDDFNPQDLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTALLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|300114862|ref|YP_003761437.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
gi|299540799|gb|ADJ29116.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
Length = 464
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 232/474 (48%), Gaps = 62/474 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG-LE 181
V ++GRPNVGKS LFNRL R R+ALV + P VTRD + GLA G+ F V+D+ G +E
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADQPG--VTRDRQYGLAYCGEQSFFVVDTGGIME 62
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E+ GS++ G + + F++D R GL LD E+ +WLR +K ++
Sbjct: 63 QESEIGSLM---RGQAQLAIEEADVIFFLVDAREGLSSLDEEIAEWLRCTEKPLKLVI-- 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E A+E LG G+P ISA G G+ +
Sbjct: 118 NKAEGRDEDL-----VASEFYCLGLGEPAIISARQGQGV--------------------E 152
Query: 302 SCTQNNSSTQDVTSPEDDESKLP-LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
Q + V E+ E + LQLA++GRPNVGKSTL+N +L E+RVL G TR
Sbjct: 153 VLLQALLTLLPVAGREESEIQAKGLQLAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
DS+ + F + GR LVDTAG +R + EK SV+QS +++ A VV LV+DA
Sbjct: 213 DSISIPFRHHGRDYTLVDTAGIRRRSRILDRVEK----FSVIQSLQSIAIAQVVILVIDA 268
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ +E G+G+V+ VNK D L Q ++ V +++ +P +
Sbjct: 269 HDSVVEQDLHLAGVILESGKGVVIAVNKWDGLPLEQ--------RQRVKKDLDRRLPFLV 320
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPK 524
+ F SAL G G + + + YQ +LPT LNR L + +H + + K
Sbjct: 321 FARIHFISALHGSGVGDLFPSIDEAYQSANSQLPTGELNRALLAAVEKHPPPIVKGRRIK 380
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV 578
++Y Q PP + + + +S R+L + F L G PI + R+V
Sbjct: 381 LRYAHQGGQNPPKIIIHGNQAEAVSANYRRYLINYFRSVFGLMGTPIALEFRTV 434
>gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1]
gi|122312352|sp|Q0AB37.1|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 467
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 241/474 (50%), Gaps = 55/474 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFN+L R R+ALV + P +TRD + G+ K+G+ + V+D+ GL
Sbjct: 3 PVIALVGRPNVGKSTLFNQLTRSRDALVADHPG--LTRDRQYGVGKVGERPYIVVDTGGL 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
+ GM LA + A +F++D RSG D E+ LR+ Q KP
Sbjct: 61 GDDPEGVE-----QGMHQQALAAIEEADAILFLVDGRSGPTAADEELAAHLRR---QGKP 112
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ + +NK + + + A AE LG G+P+ I+A G G+ L D++L
Sbjct: 113 VWLVVNKTDGVDHRL-----ATAEFHALGLGEPLPIAAAHGRGIAGLM--------DHVL 159
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L + T +++ Q +E++ ++AIVGRPNVGKSTL+N LL E+RVLV
Sbjct: 160 AGLPEGFTSAHAALQV------EEAEGATRIAIVGRPNVGKSTLVNRLLGEERVLVYDMP 213
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDSV + E GR L+DTAG +R + + SV+Q+ K + AHVV LV+DA
Sbjct: 214 GTTRDSVFIPLERDGRPYTLIDTAGMRRRARVHETVEKFSVIQTLKAMEAAHVVILVIDA 273
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E +E GR LV+ +NK D L+ Q +EAV ++ + +
Sbjct: 274 REGVTDQDTHLIGHVLESGRALVLAINKWDGLTAEQ--------REAVKAGLERKLTFLN 325
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLR-LPTSRLNRWLRKVMGRHSWK-DQSAQP 523
F SAL G G + ++ +D + R LPT LN L + H+ Q +
Sbjct: 326 FARRHFISALHGSG-VGLLFGAVDKALEAARRDLPTPILNEILADAVAAHAPPLVQGRRI 384
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y Q PP V + K L A R+L +++ DL G P+R+ RS
Sbjct: 385 KLRYAHQGGKNPPVIVIHGNQVKKLPGAYKRYLEHVFRDELDLYGTPVRLEFRS 438
>gi|387792312|ref|YP_006257377.1| ribosome-associated GTPase EngA [Solitalea canadensis DSM 3403]
gi|379655145|gb|AFD08201.1| ribosome-associated GTPase EngA [Solitalea canadensis DSM 3403]
Length = 434
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 240/472 (50%), Gaps = 62/472 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
V I+GRPNVGKS LFNRL R+A+V DD VTRD G A+ F V+D+ G
Sbjct: 5 VAIVGRPNVGKSTLFNRLTETRKAIV----DDMSGVTRDRHYGKAEWLGREFIVIDTGGY 60
Query: 181 ETEATSGSILD---RTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
A S + + R M A + + IFM+DV +G+ L+ +V LR+ KP
Sbjct: 61 V--ANSEDVFETAIREQVMIA--IEEASVIIFMVDVTTGVTDLEDDVANILRRSK---KP 113
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ V NK ++ L +A G G+ +S+ TG G EL ++D +
Sbjct: 114 VFVVANKVDNT-----KLVHESAVFYSFGLGEVYNLSSMTGSGTGEL-------LDDIIA 161
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ D+ ED S LP + AIVGRPNVGKS+++NA L DR +V P A
Sbjct: 162 KFEPDA--------------EDTTSDLP-KFAIVGRPNVGKSSIINAFLGHDRNIVTPIA 206
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA 415
G TRDS+ +H++ G L+DTAG ++ K K SVM++ K L A V L++DA
Sbjct: 207 GTTRDSIHIHYKQFGHEFMLIDTAGLRKKTKVKENIEFYSVMRTIKALEEADVCILMVDA 266
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+++ A + +G+V+++NK DL++ ++ K+ +EA+ Q+ I T
Sbjct: 267 TAGIESQDINIFHLAEKNRKGIVLLINKWDLIA--KDHKTMKQFEEAIKQK----IAPFT 320
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+P+VFTS E + + + Y ++PTS+LN + +V+ + + K
Sbjct: 321 DVPIVFTSVTEKQRIFKAIEVAQEVYTNKTKKIPTSKLNDVMLEVIEHYPPPSTKGKHIK 380
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
IKY TQ+ PTF F + + + + R+L L+E+FD G+P+ I R
Sbjct: 381 IKYITQLPGSAPTFAFFCNLPQYIKEPYKRYLENKLRENFDFTGVPVTIYFR 432
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP I+GRPNVGKS++ N + +V TP TRD K F ++D+AG
Sbjct: 174 LPKFAIVGRPNVGKSSIINAFLGHDRNIV--TPIAGTTRDSIHIHYKQFGHEFMLIDTAG 231
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + ++ + M T L + I M+D +G+ D+ + K+ I +
Sbjct: 232 LRKKTKVKENIEFYSVMRTIKALEEADVCILMVDATAGIESQDINIFHLAEKNRKGI--V 289
Query: 239 VAMNKCE 245
+ +NK +
Sbjct: 290 LLINKWD 296
>gi|194476538|ref|YP_002048717.1| GTP-binding protein EngA [Paulinella chromatophora]
gi|171191545|gb|ACB42507.1| GTP-binding protein EngA [Paulinella chromatophora]
Length = 456
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 244/488 (50%), Gaps = 57/488 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
L TV IIGRPNVGKS L NRL + REA+V++ + VTRD G+ +F+V+D+ G
Sbjct: 3 LSTVAIIGRPNVGKSTLANRLCQSREAIVHD--ELGVTRDRTYQKGFWGEKQFQVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L L++ A+ ++D + GL D + ++LR H+ I ++
Sbjct: 61 LVFDDDS-EFLPEIRKQAIIALSEATVAVVIVDGQQGLTAADETIAEFLRGHSCPI--LL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AAE LG G P ISA G G EL + + ++ +
Sbjct: 118 AVNKCESPEQGLS----MAAEFWSLGLGTPFPISAIHGAGTGELLDKIVTYLDGTTIEEE 173
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
ND +QLAIVGRPNVGKS+LLNA+ E R +V G T
Sbjct: 174 ND----------------------IVQLAIVGRPNVGKSSLLNAICGETRAIVSQIRGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + E +G L+DTAG +R + GP S+ +S K + R+ V L++DA +
Sbjct: 212 RDTIDTYVEREGYHWRLIDTAGIRRRRSVDYGPELFSINRSFKAIERSDVCLLIIDALDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R EEGR ++I+NK D + ++ A+ +++++ + + P
Sbjct: 272 VTEQDQRLAGRIEEEGRACIIIINKWDAIEKDSHTM------SAMEKDLRSKLYFLNWAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QP 523
++F SAL+G+ ++ + +++ R+ TS +N L++ + SW+ A Q
Sbjct: 326 MLFISALKGQRVESIFALAVLVLEQYRRRVTTSVVNEVLKEAV---SWRPPPANRGGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS-VPRKC 582
+I Y TQV PP+F F++ K D R++ + ++E G P+++ R R+
Sbjct: 383 RIYYGTQVTNCPPSFTLFVNEAKLFGDTYKRYIERQIREGLGFEGSPLKLFWRGKQQREA 442
Query: 583 GSSSSRQN 590
S SRQ
Sbjct: 443 ERSLSRQQ 450
>gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118]
gi|122479081|sp|Q21W32.1|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118]
Length = 447
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 241/475 (50%), Gaps = 59/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL + R+A+V + +TRD G AK G F V+D+ G
Sbjct: 3 PVVALVGRPNVGKSTLFNRLTKSRDAIVADFAG--LTRDRHYGNAKQGKHEFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A +G I A T +A+ IF++D R G+ D E+ K+LR+ KP ++
Sbjct: 61 EPDA-AGGIFKEMAKQTTQAVAEADVVIFVVDAREGISAQDHEIAKYLRRLG---KPCVL 116
Query: 240 AMNKCESLHNGTGSLAGAA-AESLMLGFGDPIAISAETGLGMTELYE-ALRP-SVEDYML 296
A NK E G LAGA E LG G+ AISA G G+ L + AL P +ED
Sbjct: 117 AANKAE------GMLAGAQLVEFFELGLGEVHAISAAHGQGIRTLVDLALAPLHLED--- 167
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
QD + DE + P ++LA+ GRPNVGKSTL+N L E+R++
Sbjct: 168 --------------QD----DADEQREPGIIKLAVAGRPNVGKSTLINTWLGEERLVAFD 209
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ V FE G+ LVDTAG +R K + SV+++ + + ++VV L++
Sbjct: 210 LPGTTRDAISVPFERNGQKFELVDTAGLRRRGKVFEAIEKFSVVKTLQAIESSNVVLLLI 269
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + +E GR +V+ VNK D + Q +E V + I+T +P
Sbjct: 270 DATQGVTDQDAHIAGYILENGRAVVIAVNKWDAVDEYQ--------RELVKRSIETRLPF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-Q 522
+ + SA + +G + + Y+ ++ T L R L + + S K +
Sbjct: 322 LKFATMHLISATKRQGLGPLWASIAQAYKAANCKMSTPILTRLLLEAVQFQSPKRSGMFR 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + + + ++DA RFL +++FDL G P+RI +S
Sbjct: 382 PKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFLEGRFRKEFDLVGTPMRIEFKS 436
>gi|260887150|ref|ZP_05898413.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|330839080|ref|YP_004413660.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|260863212|gb|EEX77712.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|329746844|gb|AEC00201.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
Length = 442
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 239/469 (50%), Gaps = 50/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L R+R ++V + P VTRD A+ F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLP--GVTRDRIYLDAEWLGKEFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + TS IL + + +F++D R+GL D EVGK LR KP++
Sbjct: 62 ELD-TSDVILRSMRQQAQIAMEEADVILFLVDGRAGLTLADEEVGKMLRTTK---KPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + E LG GDP+ ISA + + +L +AL + +
Sbjct: 118 AVNKIDSPKQESD-----VYEFYNLGLGDPVPISATNAMNLGDLLDAL--------VALF 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + S + + +A++GRPNVGKS+L+NALL E+RV+V AG T
Sbjct: 165 PEGAEEEKESDE-------------ISIAVIGRPNVGKSSLVNALLGEERVIVSDVAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA--- 415
RD++ HF + L+DTAG ++ K P SVM++ + + RA VV +VLDA
Sbjct: 212 RDAIDTHFMAEDTKFILIDTAGMRRKGKIDAPIERYSVMRALRAVDRADVVLVVLDATAG 271
Query: 416 --EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E+ + + E G+ +V+IVNK D+ + + + E++ + + P
Sbjct: 272 ITEQDKKIAGYAHESGKAVVLIVNKWDIYENKDEKSTLR-----FTDELRIELGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V++TSAL + V V + +R+ TS LN +R ++ + + Q KI+Y
Sbjct: 327 VLYTSALTHQRVARVTDLVKYVADQASMRVKTSILNDLVRDMIAVNPPPAHKGKQLKIRY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ RPP F+ F++ + + + LR++ L+E F G P+R+ R
Sbjct: 387 MTQADIRPPKFIVFVNEPELMHFSYLRYIENKLRESFGFEGTPLRLIVR 435
>gi|297588533|ref|ZP_06947176.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516]
gi|297573906|gb|EFH92627.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516]
Length = 438
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 241/471 (51%), Gaps = 63/471 (13%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GR NVGKS LFN+LI++R A+ + P VTRD A+ + F V+D+ GL
Sbjct: 4 PVVAIVGRANVGKSTLFNKLIKKRIAITQDDP--GVTRDRLYMEAEWQNKYFTVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHAP 233
E + S I+ T N+ +T+ AI FM+D + G+ P+D+EV LR+
Sbjct: 62 EPK--SNEII------TKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADMLRRTKK 113
Query: 234 QIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED 293
+ I+ +NK + + + LGF + ISA +G+ +L EA+ +D
Sbjct: 114 SV--ILVVNKIDHIKQQDN-----VYDFYNLGFYEIFPISASNSMGLGDLLEAVVSKFDD 166
Query: 294 YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
NS+T+ +DD +K+ L +G+PNVGKS+L+N LL E+R++V
Sbjct: 167 -------------NSNTE----SDDDITKVCL----IGKPNVGKSSLINNLLNEERMIVT 205
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
AG TRD++ Y+G +DTAG +R K + SV+++ + R+ + L+
Sbjct: 206 DIAGTTRDAIDSKINYKGNEYIFIDTAGLRKRRKIDTEVERYSVVRTLSAIDRSDICVLM 265
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
+DA E A ++G+ ++++VNK DL+ + N+ ++I+T +
Sbjct: 266 IDATEGVSEQDTKILGYAHDQGKAMIILVNKWDLVEKQTNTM------NDFKKDIRTKLG 319
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSA 521
V +P+VF S E + + ++ + +R+ T LN + K V+ D+
Sbjct: 320 FVMYVPIVFISVKENKRIDTLFTEIEKVDNNYSMRISTGVLNDVISKAVLLNPPPSDKGV 379
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
+ KI Y TQ++ARPP F+ F++ + + R++ L+E+F G+P++
Sbjct: 380 RLKIFYITQIEARPPKFLVFINRNDLMHFSYQRYIENQLRENFSFEGVPLQ 430
>gi|145589468|ref|YP_001156065.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189037153|sp|A4SYD7.1|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 454
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 234/469 (49%), Gaps = 54/469 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS LFNRL R R+ALV + +TRD G ++G+ F +D+ G
Sbjct: 3 PVITIVGRPNVGKSTLFNRLTRSRDALVADF--SGLTRDRHYGKGRIGERAFICVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A +G I+ A T +A++ IF++D R G+ P D + +LRK + I+A
Sbjct: 61 EPVAKTG-IVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPV--ILA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + +G A+ LG G+P IS+ G G+ L ++D +
Sbjct: 118 VNKTEGMQSGI-----VTADFHELGLGEPFPISSAHGDGVKGL-------IDDAL----- 160
Query: 301 DSCTQNNSSTQDVTSPEDDE----SKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
DS + P++DE P+++A+VGRPNVGKSTL+N L+ E+RV+
Sbjct: 161 DSLG--------IAEPDEDELANDPNRPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMP 212
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ V FE G+ LVDTAG +R K + SV+++ + + +VV L+LDA
Sbjct: 213 GTTRDAIEVPFERNGKPYILVDTAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDA 272
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + VE GR LVV VNK D L VKE EI + +
Sbjct: 273 QQDISEQDAHIAGFIVEAGRALVVAVNKWD--------GLDAYVKERARLEIAQKLRFLD 324
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPK 524
V SA +G G + V Y +LPT RL R L++ + K +PK
Sbjct: 325 FANVHPISAKKGTGLKDLFKDVDAAYAAAMAKLPTPRLTRILQEAIEHQQPKRVGMGRPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
++Y Q PP V + ++D+ R+L ++ F L G P+RI
Sbjct: 385 LRYAHQGGMNPPIVVIHGTSLSGVTDSYKRYLEGRFRDVFKLRGTPLRI 433
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 17/223 (7%)
Query: 76 CGVVQNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKI----------DINLLPTVMI 125
G+V + E EP P VK L + +D I D N + +
Sbjct: 126 SGIVTADFHELGLGEPFPISSAHGDGVKGLIDDALDSLGIAEPDEDELANDPNRPMKIAV 185
Query: 126 IGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEAT 185
+GRPNVGKS L N+LI + ++ P TRD E + + ++D+AGL
Sbjct: 186 VGRPNVGKSTLINKLIGEERVIAFDMPG--TTRDAIEVPFERNGKPYILVDTAGLRRRGK 243
Query: 186 SGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKC 244
+++ + + T +A I M+D + + D + ++ + + +VA+NK
Sbjct: 244 VFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRAL--VVAVNKW 301
Query: 245 ESLHNGTGSLA--GAAAESLMLGFGDPIAISAETGLGMTELYE 285
+ L A A + L F + ISA+ G G+ +L++
Sbjct: 302 DGLDAYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKDLFK 344
>gi|376005884|ref|ZP_09783254.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
gi|375325736|emb|CCE19007.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
Length = 453
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 243/473 (51%), Gaps = 58/473 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL + ++A+V++ P +TRD A D F V+D+ GL
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQP--GMTRDRTYRSAYWQDREFTVVDTGGL 61
Query: 181 ETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ + + L R + A LA+ AI ++D ++G D + WLR+ ++ ++
Sbjct: 62 VFDDDTEFLPLIREQALMA--LAEATAAILVVDGQTGPTGGDEAIASWLRQQ--KVPILL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AA+ LG G+P IS+ G G EL +AL
Sbjct: 118 AVNKCESPTQGLTQ----AAQFWELGLGNPFPISSIHGSGTGELLDAL------------ 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+++ + D+E L++AIVGRPNVGKS+LLN L ++R +V P +G T
Sbjct: 162 ----------IENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD++ E+ G T LVDTAG ++R+K E G + ++ K + RA VV V+DA E
Sbjct: 212 RDAIDTIVEHNGNTYRLVDTAG-IRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVTG 466
R ++GR V++VNK D + + L Y++V +++ + +
Sbjct: 271 GVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKV-------MRSRLYFLDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ TS +N + + + HS Q Q
Sbjct: 324 ADMIFVSAMTGQ-RVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV + PPT V F++ K D R++ ++ G PIR+ R
Sbjct: 383 KIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWR 435
>gi|421866987|ref|ZP_16298649.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
gi|358073151|emb|CCE49527.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
Length = 433
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 234/461 (50%), Gaps = 51/461 (11%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G E A G IL
Sbjct: 1 MGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDG-IL 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAMNKCESLHN 249
A T + + +F++D R+GL P D + +LRK +PI + +NK E +
Sbjct: 58 HEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFLVVNKAEGM-- 112
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVLNDSCTQNNS 308
A + LG GDP AISA G G+T++ EAL +
Sbjct: 113 ---KYTAVATDFYELGLGDPRAISAAHGDGVTDMINEALEVAY----------------- 152
Query: 309 STQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFE 368
+ Q + EDD S+ +++AIVGRPNVGKSTL+NAL+ EDRV+ G TRDS+ V FE
Sbjct: 153 AGQPEEAEEDDPSR-GIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFE 211
Query: 369 YQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVRA------- 420
G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++ +
Sbjct: 212 RNGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIA 271
Query: 421 ---VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEG 477
VE+GR LV+ VNK D L R K + ++++ + + F SA +
Sbjct: 272 GFVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH----FISAAKK 323
Query: 478 RGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYFTQVKARPP 536
G A+M V D Y +LPT +L R L V + + +PK++Y Q PP
Sbjct: 324 TGIGALMRSVDDAYAAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPP 383
Query: 537 TFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
V + +++ R+L +E F L G P+RI RS
Sbjct: 384 IIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 424
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSAGLE 181
+ I+GRPNVGKS L N LI + ++ P TRD I + G ++ ++D+AGL
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMP--GTTRDSIYVDFERNGK-KYTLIDTAGLR 226
Query: 182 TEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+++ + + T ++ I ++D + + D + ++ + + ++
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRAL--VIG 284
Query: 241 MNKCESLHNGTGSLAGAAAESLM--LGFGDPIAISA--ETGLGMTELYEALRPSVED 293
+NK + L + A A + L F ISA +TG+G AL SV+D
Sbjct: 285 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIG------ALMRSVDD 335
>gi|209527936|ref|ZP_03276422.1| small GTP-binding protein [Arthrospira maxima CS-328]
gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328]
Length = 453
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 243/473 (51%), Gaps = 58/473 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL + ++A+V++ P +TRD A D F V+D+ GL
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQP--GMTRDRTYRSAYWQDREFTVVDTGGL 61
Query: 181 ETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ + + L R + A LA+ AI ++D ++G D + WLR+ ++ ++
Sbjct: 62 VFDDDTEFLPLIREQALMA--LAEATAAILVVDGQTGPTGGDEAIASWLRQQ--KVPILL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AA+ LG G+P IS+ G G EL +AL
Sbjct: 118 AVNKCESPTQGLTQ----AAQFWELGLGNPFPISSIHGSGTGELLDAL------------ 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+++ + D+E L++AIVGRPNVGKS+LLN L ++R +V P +G T
Sbjct: 162 ----------IENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD++ E+ G T LVDTAG ++R+K E G + ++ K + RA VV V+DA E
Sbjct: 212 RDAIDTIVEHNGNTYRLVDTAG-IRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVTG 466
R ++GR V++VNK D + + L Y++V +++ + +
Sbjct: 271 GVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKV-------MRSRLYFLDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ TS +N + + + HS Q Q
Sbjct: 324 ADMIFVSAMTGQ-RVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV + PPT V F++ K D R++ ++ G PIR+ R
Sbjct: 383 KIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWR 435
>gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
Length = 504
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 237/486 (48%), Gaps = 46/486 (9%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLR- 121
Query: 231 HAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRP 289
A Q + NK + L A + LG G+ I+A G G+ L E L P
Sbjct: 122 -ARQKPTFLVANKTDGLDPDQ-----AVIDFYSLGLGEIHPIAASHGRGVLSLLEHVLLP 175
Query: 290 SVEDYMLRVLNDSCTQ----------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKST 339
++D + D + +D +P+D LP++LAIVGRPNVGKST
Sbjct: 176 WMDDVAPQEEVDEDAEYWAKLAAEENGEEEPEDDFNPQD----LPIKLAIVGRPNVGKST 231
Query: 340 LLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQ 398
L N +L EDRV+V G TRDS+ + E GR L+DTAG +R K + SV++
Sbjct: 232 LTNRILGEDRVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITEAVEKFSVIK 291
Query: 399 SRKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKR 448
+ + + A+VV LV+DA E + ++ GR LV++VNK D L +
Sbjct: 292 TLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQE 343
Query: 449 VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLR 508
VKE V + + + + V F SAL G G + V + Y R+ T+ L R +
Sbjct: 344 VKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMT 403
Query: 509 KVMGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
+ H + + K+KY PP V + K L D+ R+L ++ D+
Sbjct: 404 MAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKTLDVM 463
Query: 568 GIPIRI 573
G PIRI
Sbjct: 464 GTPIRI 469
>gi|302391816|ref|YP_003827636.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501]
gi|302203893|gb|ADL12571.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501]
Length = 438
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 241/470 (51%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNR++ R ++V + P +TRD G + D F V+D+ GL
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGNRISIVEDEP--SITRDRLYGEGEWLDNHFLVVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ + + + D + + + +F++D R+G+ P+D EV LR+ KPI+
Sbjct: 62 DLD-SEAELKDEVRQQAELAIEEAEVVLFVVDGRTGIKPMDREVANLLRRSN---KPIIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK +S + LG G+P+AISA+ L +L + +
Sbjct: 118 TVNKVDSKE----LEEKVKYDFYELGLGEPVAISAKHALNTGDLLDEV------------ 161
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ ST++ ++D ++++++GRPNVGKS+L+N++L ++RV+V G T
Sbjct: 162 -----ISHFSTEETGEYDED----TIRISVIGRPNVGKSSLVNSILGKERVIVNDVPGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ +FE ++DTAG +R K E G SV++S K + R+ V +VLDA +
Sbjct: 213 RDAIDTYFEVGDNQFVIIDTAGMRKRSKVEAGIEKYSVIRSLKAVDRSDVALMVLDATQG 272
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A ++G+ +V+ VNK DL+ N + + EI+ + P
Sbjct: 273 ITQQDKKIAGYAHDQGKAMVIAVNKWDLIKKETN------IDQRYADEIRYEASFINYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+ F SAL G+ + ++ V +++ R+ T+ LN +++ + +H Q + K+ Y
Sbjct: 327 ITFVSALTGQRVLEILDIVEYAAEQYSRRIKTNVLNNVIKEAISKHQPPSQKGRRLKVYY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQ + +PP + F++ L + R+L S+++ F G P++I R+
Sbjct: 387 ATQPRVKPPLIILFVNDPTLLRQSYKRYLKNSIRKSFGFDGTPLKIIARN 436
>gi|91775967|ref|YP_545723.1| GTP-binding protein EngA [Methylobacillus flagellatus KT]
gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT]
Length = 499
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 239/467 (51%), Gaps = 49/467 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPT++++GRPNVGKS LFNRL + R+ALV + P +TRD G +G + V+D+
Sbjct: 2 MLPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPG--LTRDRHYGRGVVGSKPYLVVDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R+GL P D + + LRK I +
Sbjct: 60 GFEPLVDSG-ILKEMARQTLLAIDEADVVIFLVDGRNGLAPQDKVIAERLRKSQRPI--L 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NK E + A A+AE LG G P++IS+ G G+ +L E ++E++
Sbjct: 117 LAVNKTEGMQR-----AIASAEFHELGLGHPLSISSAHGEGVRDLVEL---ALENF---- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ E +++P ++AIVGRPNVGKSTL+NALL E+RV+ + G
Sbjct: 165 -----------PEPGEEEESQGNQVP-KVAIVGRPNVGKSTLVNALLGEERVIAFDQPGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + E G+ ++DTAG +R K + SV+++ + + A+V LV+DA+E
Sbjct: 213 TRDSIYLDLERNGKRYTIIDTAGVRRRGKVFEAVEKFSVIKTMQAIEEANVAILVVDAQE 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
++ GR LVV VNK D L + +E + +EI + +
Sbjct: 273 GITEQDAHVSAYILDSGRALVVAVNKWDGLEDDK--------REWIKREIDRKLQFLDFA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
+ SAL +G + H V Y+ +L T +L R L +H + +PK++
Sbjct: 325 KFHYISALRKKGLGELFHSVDAAYKAAMAKLSTPQLTRVLEDATMQHQPPISKGIRPKLR 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y Q + PP V + + ++ R+L ++ F L G P+R+
Sbjct: 385 YAHQGGSNPPIVVIHGNHVDGIKESYRRYLAGVFRKAFQLTGTPLRV 431
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLD 176
N +P V I+GRPNVGKS L N L+ + ++ P TRD I L + G R+ ++D
Sbjct: 176 NQVPKVAIVGRPNVGKSTLVNALLGEERVIAFDQPG--TTRDSIYLDLERNGK-RYTIID 232
Query: 177 SAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+AG+ +++ + + T + + AI ++D + G+ D V ++ +
Sbjct: 233 TAGVRRRGKVFEAVEKFSVIKTMQAIEEANVAILVVDAQEGITEQDAHVSAYILDSGRAL 292
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLM--LGFGDPIAISAETGLGMTELYEALRPSVED 293
+VA+NK + L + + + L F ISA G+ EL+ ++ + +
Sbjct: 293 --VVAVNKWDGLEDDKREWIKREIDRKLQFLDFAKFHYISALRKKGLGELFHSVDAAYKA 350
Query: 294 YM--------LRVLNDSCTQNN 307
M RVL D+ Q+
Sbjct: 351 AMAKLSTPQLTRVLEDATMQHQ 372
>gi|404497169|ref|YP_006721275.1| GTP-binding protein Der [Geobacter metallireducens GS-15]
gi|418066669|ref|ZP_12704029.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
gi|123571482|sp|Q39T85.1|DER_GEOMG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78194772|gb|ABB32539.1| GTPase EngA [Geobacter metallireducens GS-15]
gi|373560162|gb|EHP86434.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
Length = 439
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 238/477 (49%), Gaps = 53/477 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V I+GRPNVGKS LFNRL+ RR+A+V + P VTRD + F ++D+
Sbjct: 1 MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPG--VTRDRNYETVTRFEAPFILIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E + +L + + + + IF++D R+GL P D+EV + LR+ + +
Sbjct: 59 GFEP-VSEDRLLQQMREQSQLAMEEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFV 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V E + N AA+ LG G ISAE G+ +L E + ++ R
Sbjct: 118 VNKVDGEKIEN-------EAADFYTLGIGTLHTISAEHNRGVNDLMEEVVAALPKSSTR- 169
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D +D+T ++A+VGRPNVGKS+L+N LL +RV+ P G
Sbjct: 170 LDD---------EDIT-----------RIAVVGRPNVGKSSLVNRLLGFERVVANPTPGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDA 415
TRDSV F + L+DTAG R K K L SV+ S +++ RA VV ++++A
Sbjct: 210 TRDSVDTLFACNKKRYLLIDTAGI--RRKGKTTQKLEKYSVVDSLRSIERADVVLIIINA 267
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
EE A E G+ + +VNK D L+ + NS L K V +I+T ++
Sbjct: 268 EEGVTEQDERIAGYAFEAGKACIFVVNKWDTLA-KDNSTLGKFV-----DQIKTEFKYLS 321
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPK 524
P+VF SA G+ VM +V ++ R+ TS LNR + + +H + K
Sbjct: 322 FAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLNRVFSEAVEKHHAPLSHGRRVK 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ TQV +PPTFV F + + + + R+L +E FD G P++I R R+
Sbjct: 382 FYFATQVGTKPPTFVLFTNQPEGVHFSYERYLMNKFREAFDFTGSPLKIIFRGRDRR 438
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 109 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 168
P T++D + + ++GRPNVGKS+L NRL+ + TP TRD + L
Sbjct: 164 PKSSTRLDDEDITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPG--TTRDSVDTLFACN 221
Query: 169 DLRFKVLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLDLEVGKW 227
R+ ++D+AG+ + + L++ + + + + + + +I+ G+ D + +
Sbjct: 222 KKRYLLIDTAGIRRKGKTTQKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGY 281
Query: 228 LRKHAPQIKPIVAMNKCESLHNGTGSLAGAA----AESLMLGFGDPIAISAETGLGMTEL 283
+ I +NK ++L +L E L F + +SA++G + +
Sbjct: 282 AFEAGKAC--IFVVNKWDTLAKDNSTLGKFVDQIKTEFKYLSFAPIVFVSAKSGQRINRV 339
Query: 284 YEALRPSVEDYMLRV 298
E + + Y RV
Sbjct: 340 MEEVERVMAQYSKRV 354
>gi|255292050|dbj|BAH90531.1| GTP-binding protein EngA [uncultured bacterium]
Length = 466
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 225/470 (47%), Gaps = 50/470 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + ++GRPNVGKS LFNRL R R+ALV + P VTRD G +LGD F V+D+
Sbjct: 1 MTPVIALLGRPNVGKSTLFNRLTRTRDALVADFPG--VTRDRLVGSGQLGDRPFWVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GL E + S + + + + ++D R+G D + + LR ++
Sbjct: 59 GLLGEDSQLS--GKVSDQALAAAQEADAVLLVVDARAGPTADDRTIAETLRTLGRPVR-- 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
VA+NK E L+ AE LG G+P ISA G G+ +L
Sbjct: 115 VAVNKAEHLNPEL-----VRAEFFELGLGEPTPISASHGHGVRDLL-------------- 155
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D+ + V PE+ E P+ A+VGRPN GKSTL+N LL + R++ P G
Sbjct: 156 --DTVLDAFPPAEPV--PEEAEDSRPV-FAVVGRPNAGKSTLINRLLGQSRLIESPLPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRD VRV + GR L+DTAG +R + + SV+++ + + A VV LV+D E
Sbjct: 211 TRDCVRVPVQLDGRDCLLLDTAGLRRRAQVHEAIEKFSVVKTLQAIDLAQVVVLVIDGEL 270
Query: 417 ---------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+A++ GR LVV VNK D L +AL + E++ +P +
Sbjct: 271 GIGEQDARIAGQALQRGRALVVAVNKADTLDDSARAALRR--------EVERRLPFIGFA 322
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIK 526
PV F SA GRG A+ + + R+PTS L R L ++ R+ + K++
Sbjct: 323 PVEFISAKSGRGLKALTRSLFAVHSSALTRVPTSELTRLLEAIVTRNPPPMSGGRRAKLR 382
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y Q PPT V + L LR+L S +E L G PIRI R
Sbjct: 383 YAHQGGHSPPTVVIHGTQVAGLPAHYLRYLENSFREALGLTGTPIRIVTR 432
>gi|318042392|ref|ZP_07974348.1| GTP-binding protein Der [Synechococcus sp. CB0101]
Length = 454
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 232/473 (49%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + REA+V++ P VTRD D FKV+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCKSREAIVHDEPG--VTRDRTYQDGYWRDRHFKVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L L++ A+ + D + GL D + +WLR H + ++
Sbjct: 61 LVFDDDS-EFLPEIREQANLALSEASVAVVIADGQQGLTAADESIAEWLRGH--NVPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AAE LG G+P ISA G G +L
Sbjct: 118 AVNKCESPEAGLS----MAAEFWSLGLGEPYPISAIHGAGTGDLL--------------- 158
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + T+++T E P+QLAI+GRPNVGKS+LLNA+ E R +V P G T
Sbjct: 159 -DKLVDHLPPTEELTGEE------PIQLAIIGRPNVGKSSLLNAICGEKRAIVSPIRGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGW-LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E +G T ++DTAG +R GP + +S K + R+ V LV+D +
Sbjct: 212 RDTIDTTIEREGHTWKILDTAGIRRKRSVNYGPEFFGINRSFKAIERSDVCVLVIDVLDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R E+GR VV+VNK D + ++ A+ +E++ + + P
Sbjct: 272 VTEQDQRLAGRIEEDGRACVVVVNKWDAIEKDSHTM------PAMEKELRAKLYFLDWAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-----QP 523
++FTSAL G+ ++ ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 MLFTSALSGQRVQSIFAIAAVAVEQHRRRVSTSVVNEVLQEAV---SWRSPPTSRGGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV RPP+F F++ K D R++ + ++E G P+++ R
Sbjct: 383 RIYYGTQVATRPPSFTLFVNDPKLFGDTYRRYVERQIREGLGFEGSPLKLFWR 435
>gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|438002226|ref|YP_007271969.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|432179020|emb|CCP25993.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
Length = 439
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 247/471 (52%), Gaps = 59/471 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V ++G+PNVGKS LFNR+I +R ++V + P VTRD G A+ +F ++D+ G+E
Sbjct: 5 VAVVGKPNVGKSTLFNRIIGKRISIVDDKP--GVTRDRIYGEAEWNGKKFTMVDTGGVEP 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-AM 241
A+ IL + + +FM+D + GL P DL+V + LR+ KP++ +
Sbjct: 63 -ASKDIILSQMKRQADFAIETANLILFMVDGKEGLTPTDLDVAQILRRSG---KPVLLVV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVED-YMLRVLN 300
NK ++ N E LGFGDPI ISA GL + +L + + +E+ ++L
Sbjct: 119 NKVDNYTN-----TAYDYEFYKLGFGDPIFISAVHGLAVGDLLDKITDYIEEPHIL---- 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
S +D+ +++AI+G+PNVGKS+LLNA+L E+RV+V G TR
Sbjct: 170 -------SEDEDI-----------IKVAIIGKPNVGKSSLLNAILGEERVIVSDIPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
D++ +FE G+ + +DTAG ++ + + S +++ + RA VV +VLDA
Sbjct: 212 DAIDSYFEINGKKMLFIDTAGLRKKSRISEDVEYYSTVRALGAIDRADVVLMVLDASQNI 271
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
++ R A E G+ +++IVNK DL+ ++ + ++I+ + + P+
Sbjct: 272 SEQDKRIAGIAHEAGKAVIIIVNKWDLIDKDSHTT------DEFSKKIKNELAFMQYAPI 325
Query: 470 VFTSALEGR--GRI-AVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKI 525
V+ SA G+ GRI +++ V+D Y R+ TS LN +R+ + + KI
Sbjct: 326 VYVSAKTGQRVGRILELINFVMDNY---TFRVKTSLLNELVREATAVSEPPSIKGKKLKI 382
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ +PPTF+ F++ K + R+L +L++ F G PI I R
Sbjct: 383 FYATQTGIKPPTFIFFVNDIKLFHFSYARYLENTLRQTFGFEGTPIIIKPR 433
>gi|443311191|ref|ZP_21040823.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
gi|442778721|gb|ELR88982.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
Length = 458
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 244/496 (49%), Gaps = 63/496 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL A+VY+ P +TRD A GD F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAGTGAAIVYDEPG--ITRDRTYVNAYWGDRDFVVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + + L + A L + A+F++D ++G+ D E+ +WLR+ + + ++
Sbjct: 61 LVFDDDT-EFLPQIREQAALALKEASAALFIVDGQAGICAADEEIAQWLRQQS--VPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYML 296
A+NKCES G A++ LG G+P +S G G EL +A+ P ED
Sbjct: 118 AVNKCESAELGLSQ----ASQFWELGLGEPFPMSGIHGNGTGELLDAVVAHLPLAEDL-- 171
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
P+ DE K+ AIVGRPNVGKS+LLNA + E+R +V P +
Sbjct: 172 -------------------PDVDEVKI----AIVGRPNVGKSSLLNAFVGENRAIVSPIS 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD++ E G+T L+DTAG ++R+K E G + ++ K + RA VV LVLD
Sbjct: 209 GTTRDAIDTVIERDGKTYRLIDTAG-IRRKKNVEYGAEFFGINRAFKAIRRADVVLLVLD 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AE+ R EEGR VV++NK D + + + +Y K ++ + +
Sbjct: 268 AEDGVTEQDQKLVARIEEEGRSCVVVINKWDAVE-KDSYTIYDHEK-----TLKERLYFI 321
Query: 465 TGIPVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQS 520
++F SA G+ +I + V K R+ TS +N L + + HS Q
Sbjct: 322 EWAEMIFVSAKTGQRVEKILELADVAAAAHK--RRVTTSVINEVLEEAVRWHSPPTSRQG 379
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP- 579
Q KI Y TQV +PP F++ + R++ + ++ G PIR+ RS
Sbjct: 380 RQGKIYYGTQVSTQPPAIALFVNEASRFPENYKRYIERQFRQQLGFVGTPIRLFWRSKKV 439
Query: 580 RKCGSSSSRQNTGQKV 595
R+ ++ S N +V
Sbjct: 440 REVENTGSPTNRATRV 455
>gi|386592324|ref|YP_006088724.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|383799368|gb|AFH46450.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
Length = 504
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFFNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAAQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG G+ I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q + +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDVAPQEEVDEDAEYWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|238019393|ref|ZP_04599819.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
gi|237864092|gb|EEP65382.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
Length = 444
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 246/476 (51%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFITDNSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V DDE + +A++GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DDEDTI--HVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ ++ + + L+DTAG ++ K E+ S+++S +++ R+ +V LVLDA++
Sbjct: 213 TRDSIDTYWTHGDQKFVLIDTAGMRRKSKIEEAVERYSIVRSLRSVDRSDIVVLVLDAQD 272
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G++++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVIIVVNKWDLIEKDDKTTL--RFTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLRGKKR 440
>gi|402837079|ref|ZP_10885610.1| ribosome-associated GTPase EngA [Mogibacterium sp. CM50]
gi|402270095|gb|EJU19364.1| ribosome-associated GTPase EngA [Mogibacterium sp. CM50]
Length = 440
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 234/468 (50%), Gaps = 57/468 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS FNR+I R+A+V +TP VTRD + F ++D+ G+
Sbjct: 4 PILAVVGRPNVGKSTFFNRIIGERKAIVQDTP--GVTRDRIYAETEWNGREFAIIDTGGI 61
Query: 181 ETEATSGSIL---DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
E A +G I+ R +TA LA +FM+D + GL D +V LR+ ++
Sbjct: 62 E--ANTGDIILSQMREQAVTAMELADV--ILFMVDGKEGLTIADHDVADILRRTGKEV-- 115
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
I+ +NK ++ G L + LGFG+PIAIS+ L M +L +A+ D L
Sbjct: 116 ILVVNKVDN----PGKLGDDIYDFYELGFGEPIAISSVNMLNMGDLLDAIVTGFPDDELY 171
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
DS ++AI+G+PNVGKS+L+NAL E RV+V P AG
Sbjct: 172 GYEDST----------------------RIAIIGKPNVGKSSLVNALTNEKRVIVSPIAG 209
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRDS+ F Y + L+DTAG ++ K SV+++ ++ R + +++DA
Sbjct: 210 TTRDSIDTPFSYNDKEYTLIDTAGLRRKSKVNDSIEHFSVIRAVASVERCDICIMMIDAA 269
Query: 417 EVR----------AVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVT 465
E A E G+GL+++VNK DL+ N+ Y+R +++ + V+
Sbjct: 270 EGLTEQDKKILGIAHEAGKGLMIVVNKWDLVQKETNTMRDYER-------KLRADLRFVS 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPK 524
P++F S LE R ++ + R+ T +LN + VM R D+ + K
Sbjct: 323 YAPILFVSVLENRRVFDIIDKAAKIEDIRSRRITTGKLNSIIEDAVMMRQPPSDKGKRLK 382
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
I Y +Q+ +RPP F ++ ++ + + R+L L+E +D G I+
Sbjct: 383 IYYASQIGSRPPLFSFNINSRRLMHFSYSRYLENKLREAYDFEGTSIK 430
>gi|312173198|emb|CBX81453.1| GTP-binding protein engA [Erwinia amylovora ATCC BAA-2158]
Length = 499
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 236/482 (48%), Gaps = 46/482 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R A + + + +FM+D R+GL P D + K LR A Q
Sbjct: 59 GID--GNEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLR--ARQKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM-L 296
+ NK + L + A + LG G+ I+A G G+T L E L P +++
Sbjct: 115 IVANKTDGLDADS-----AVVDFWSLGLGEIHPIAASHGRGVTSLLELVLLPWMDEVAPE 169
Query: 297 RVLNDSCTQN-----------NSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNA 343
R L + +S +D EDD + LP++LAIVGRPNVGKSTL N
Sbjct: 170 RELTEEEVNEAYWAELAAKEAKASGEDTADAEDDFNPLDLPIKLAIVGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L EDRV+V G TRDS+ + E GR L+DTAG +R K + SV+++ K
Sbjct: 230 ILGEDRVVVFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLKA 289
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D LS + V++
Sbjct: 290 IEDANVVMLVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVRDE 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + + F SAL G G + V + Y R+ TS L R +
Sbjct: 342 VKEALDYRLGFIDFARIHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHMAAD 401
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H +S + K+KY PP V + K L D+ R+L + D+ G PI
Sbjct: 402 DHQPPLVRSRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLDIMGTPI 461
Query: 572 RI 573
RI
Sbjct: 462 RI 463
>gi|336246645|ref|YP_004590355.1| GTP-binding protein Der [Enterobacter aerogenes KCTC 2190]
gi|444355379|ref|YP_007391523.1| GTP-binding protein EngA [Enterobacter aerogenes EA1509E]
gi|334732701|gb|AEG95076.1| GTP-binding protein Der [Enterobacter aerogenes KCTC 2190]
gi|443906209|emb|CCG33983.1| GTP-binding protein EngA [Enterobacter aerogenes EA1509E]
Length = 492
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 237/484 (48%), Gaps = 56/484 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-- 294
+ NK + + + A A+ LG GD I+A G G+T L E L P V++
Sbjct: 114 FLVANKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEHVLLPWVDEVNP 168
Query: 295 MLRVLNDSCT----QNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQED 348
V D+ + + ++V PEDD LP++LAIVGRPNVGKSTL N +L ED
Sbjct: 169 QEEVDEDAAYWAQFEAEQNGEEVEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGED 228
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAH 407
RV+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+
Sbjct: 229 RVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDAN 288
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + V+E V + +
Sbjct: 289 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVREQVKETL 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 341 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVGTAMLTRIMTMAAEDH--- 397
Query: 518 DQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
QP K+KY PP V + K L D+ R+L ++ D+ G
Sbjct: 398 ----QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGT 453
Query: 570 PIRI 573
PIRI
Sbjct: 454 PIRI 457
>gi|407715871|ref|YP_006837151.1| GTP-binding factor [Cycloclasticus sp. P1]
gi|407256207|gb|AFT66648.1| GTP-binding factor [Cycloclasticus sp. P1]
Length = 468
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 236/480 (49%), Gaps = 68/480 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFN L R R+ALV + P +TRD + GL K D++ V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRTRDALVADYPG--LTRDRQYGLVKRADIKSLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ AT+ I L + +F++D R G+HP+D E+G+ LRK QI +
Sbjct: 59 GIT--ATADGIDGVAVEQVERALEEADVVLFLVDTRHGIHPIDEEIGQNLRKLGKQI--V 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK + L T AE +GF P I+A G G+ EL LR
Sbjct: 115 LVANKTDGLDANT-----HIAEFHKMGFDKPWPIAATHGRGVVEL------------LRH 157
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+++ + + S +D + +++A++GRPNVGKSTL+N LL E+RV+V + G
Sbjct: 158 VSNILPK-------IESFDDTLAGEGIRVAVIGRPNVGKSTLINRLLGEERVVVFDQPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDSV + FE G+ L+DTAG +R K + S++Q+ + + HVV ++DA E
Sbjct: 211 TRDSVFIPFERDGKQYTLIDTAGVRRRSKVSEAVEKFSIVQTLRAIDDTHVVIYMIDASE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR LV+ +NK D LS Q +E V ++I + +
Sbjct: 271 GVTDQDASLLGMVLESGRALVIGLNKWDGLSEDQ--------REKVKRQIDVKLSFLEYA 322
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
F SAL G G + + Y+ + + T RL L + H QP
Sbjct: 323 ERYFISALHGSGVGKLFESIGALYRSAMIDMSTPRLTEILENAIKAH-------QPPLVG 375
Query: 524 ----KIKYFTQVKARPPTFVAFLSGKKTLS--DAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+K+ Q PP V + G +T+S + R+L + +E L G P+RI +S
Sbjct: 376 GRRIKLKFAHQGGQNPP--VIIIHGNQTVSVPGSYKRYLMNAFREKLGLVGTPVRIEFKS 433
>gi|334119804|ref|ZP_08493888.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
gi|333457445|gb|EGK86068.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
Length = 453
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 240/474 (50%), Gaps = 59/474 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL ++A+V++ P +TRD A GD ++V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLANTQDAIVHDEP--GITRDRTYRPAYWGDREYQVVDTGG 60
Query: 180 L----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
L ETE L LA+ AIF++D ++GL D + WLR ++
Sbjct: 61 LVFDDETE-----FLPLIREQAMAALAEASAAIFVVDGQTGLTGGDESIASWLRLQ--KV 113
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
I+A+NKCES + G AA+ LG G+P +S G G EL + L + +
Sbjct: 114 PVILAVNKCESENTGLTQ----AADFWQLGLGEPYPVSGIHGNGTGELLDKLITYLPTEV 169
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
L PE +E +++AI+GRPNVGKS+LLNA L E+R +V P
Sbjct: 170 L-------------------PEVEE----IKVAIIGRPNVGKSSLLNAFLGENRAIVSPI 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ E G+T L+DTAG +++ E G + ++ K + RA V+ LV+D
Sbjct: 207 SGTTRDAIDTLVERNGKTYRLIDTAGIRKKKNVEYGAEFFGINRAFKAIRRADVILLVID 266
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R EEGR +++VNK D + + + +Y+ +E++T + +
Sbjct: 267 AIDGVTDQDQKLADRISEEGRACIIVVNKWDAVE-KDSDTIYE-----YEREVRTRLYFL 320
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW--KDQSAQ 522
++F SA+ G+ ++ V + R+PT+ +N + + HS Q Q
Sbjct: 321 DWAEMIFVSAMSGQRVEKIIELVDKASDEHKRRVPTAVINEVIEEATSWHSAPVTRQGKQ 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV+++PPT F++ K ++ R++ ++ G P+R+ R
Sbjct: 381 GKIYYGTQVRSQPPTIALFVNDPKRFTENYRRYMESQFRKHLGFTGTPMRLLWR 434
>gi|438000040|ref|YP_007183773.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812969|ref|YP_007449422.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339274|gb|AFZ83696.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778938|gb|AGF49818.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 451
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 238/469 (50%), Gaps = 40/469 (8%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P ++++GRPNVGKS LFNR + ++ALV N +TRD G G+ F V+D+ G
Sbjct: 5 PAIVLVGRPNVGKSTLFNRFTKSKDALVANFS--GLTRDRIYGDGMFGEYNFIVIDTGGF 62
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + + + A T + IF++D + GL D ++ +LRK + +
Sbjct: 63 EPLSKDKMYM-KIANQTNQAILDADIVIFLVDGKDGLCNTDYDIANFLRKLSVT-NVFLV 120
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E S+ A+E LGFG P ISA G G+ L E++ S ++
Sbjct: 121 INKSEG-----RSIDTIASEFHELGFGAPFLISASHGDGIGFLIESIFKS------KLYI 169
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D ++N+ +V S DD K ++L+IVG+PNVGKSTL+N++L E+R++ G TR
Sbjct: 170 DKYSKND----NVDSQNDDLYK-KIRLSIVGQPNVGKSTLINSILGEERLITFDSPGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ + F + GR+ L+DTAG +R + SV+++ +++ +++VV L LDA
Sbjct: 225 DSINIDFNFSGRSYVLIDTAGLRRRSRVSDCIEKFSVIKTIQSIEKSNVVILTLDANTGI 284
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
++ R +E G+ +V+ +NK D +S S A+ +E + + ++ +
Sbjct: 285 SDQDARIASFILESGKAIVIAINKWDSISLDSRS--------AIEREFKRKLHFLSFANM 336
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKYF 528
F SAL ++ V D Y ++LPT ++ R L + K PK++Y
Sbjct: 337 YFISALRKTNIKRLLFSVNDAYDAAFVKLPTPKVTRVLLDATKQQPPPKKGIFVPKLRYA 396
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP V + ++ D+ +R+L + +F L G P+RI +S
Sbjct: 397 HQGGQNPPVIVIHGNCLTSIQDSYVRYLESFFRREFKLSGTPLRIEFKS 445
>gi|354596624|ref|ZP_09014641.1| GTP-binding protein engA [Brenneria sp. EniD312]
gi|353674559|gb|EHD20592.1| GTP-binding protein engA [Brenneria sp. EniD312]
Length = 497
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 236/485 (48%), Gaps = 53/485 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGYEFIIIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R AG + + + +FM+D R+GL P D + LR Q
Sbjct: 59 GID--GAEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAHHLRSR--QKATF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + + T + LG G+ I+A G G++ L E L P V+D
Sbjct: 115 LVANKTDGIDPDT-----VIGDFYALGMGEIYPIAASHGRGVSSLLEKVLLPFVQDDEAE 169
Query: 294 -------------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTL 340
+ ++ ++ T+N +D +PED LP++LAIVGRPNVGKSTL
Sbjct: 170 PVALTEEEENAAYWAEQLADEQATENAEDAEDDFNPED----LPIKLAIVGRPNVGKSTL 225
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
N +L EDRV+V G TRDS+ + R L+DTAG +R K + SV+++
Sbjct: 226 TNRILGEDRVVVYDMPGTTRDSIYIPMVRDEREYILIDTAGVRKRGKVTETVEKFSVIKT 285
Query: 400 RKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRV 449
+ + A+VV LV+DA E + ++ GR LV++VNK D LS + V
Sbjct: 286 LQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEV 337
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
+E V + + + + + F SAL G G + V + Y R+ TS L R ++
Sbjct: 338 REQVKETLDLRLGFIDFARIHFISALHGSGVGNLFESVTEAYSCATRRVGTSMLTRIMQM 397
Query: 510 VMGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGG 568
H + + K+KY PP V + K L D+ R+L + ++ G
Sbjct: 398 AADDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLNVMG 457
Query: 569 IPIRI 573
PIRI
Sbjct: 458 TPIRI 462
>gi|227537540|ref|ZP_03967589.1| GTP-binding protein EngA [Sphingobacterium spiritivorum ATCC 33300]
gi|227242677|gb|EEI92692.1| GTP-binding protein EngA [Sphingobacterium spiritivorum ATCC 33300]
Length = 441
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 233/474 (49%), Gaps = 57/474 (12%)
Query: 118 NLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVL 175
N+ V I+GRPNVGKS LFNRL R+A+V DD VTRD A+ +F V+
Sbjct: 8 NMANIVAIVGRPNVGKSTLFNRLTESRKAIV----DDFSGVTRDRHYESAEWIGKKFTVI 63
Query: 176 DSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
D+ G + + + + IFM+DV +G+ LD E+ LR+
Sbjct: 64 DTGGF-VHGSDDVFEEAIRDQVYIAIEEASVIIFMVDVTTGITDLDDEIADILRRST--- 119
Query: 236 KPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+ VA NK + L +AE G G+ IS+ TG G EL +A+ +
Sbjct: 120 KPVYVAANKVDH-----AKLHHDSAEFYAFGLGEIYNISSATGSGTGELLDAVVSTF--- 171
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
E++ES LP + IVGRPNVGKS+L NALL ++R +V P
Sbjct: 172 -------------------EVEEEEESTLP-KYTIVGRPNVGKSSLTNALLGKERNIVTP 211
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
AG TRDS+R+H+ G L+DTAG ++ K + SVM++ K L + VV L+L
Sbjct: 212 VAGTTRDSIRIHYNQFGHEFLLIDTAGMRRKSKVNEDIEFYSVMRTIKALEDSDVVILML 271
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA++ A + +G++++VNK DL+ K +KE I+ I
Sbjct: 272 DAQDGIEAQDINIFHLAEKNKKGVMIVVNKWDLIEKDN-----KTMKE-FEARIREKIAP 325
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQ 522
T +P+VFTS E + + YQ ++PTS+LN + +V+ + +
Sbjct: 326 FTDVPIVFTSVTEKQRIHKTLEVAAKVYQNKTKKIPTSKLNEVMLQVIENYPPPAIKGKY 385
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K+KY TQ+ R P F F + + + D R++ L+E+FD G+PI++ R
Sbjct: 386 IKVKYVTQIPGRSPMFAFFCNLPQYIKDPYKRYVENKLRENFDFEGVPIQLYFR 439
>gi|424904619|ref|ZP_18328129.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
gi|390930597|gb|EIP87999.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
Length = 433
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 228/461 (49%), Gaps = 51/461 (11%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G E A G IL
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGFEPVAKDG-IL 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAMNKCESLHN 249
A T + + +F++D R+GL P D + +LRK +PI + +NK E +
Sbjct: 58 HEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFLVVNKAEGM-- 112
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELY-EALRPSVEDYMLRVLNDSCTQNNS 308
A++ LG GDP AISA G G+T++ EAL + Q
Sbjct: 113 ---KYTAVASDFYELGLGDPRAISAAHGDGVTDMINEALEVAY-----------AGQPEE 158
Query: 309 STQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFE 368
S E+D + ++AIVGRPNVGKSTL+N L+ EDRV+ G TRDS+ V FE
Sbjct: 159 S-------EEDAAARGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFE 211
Query: 369 YQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVRA------- 420
G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++ +
Sbjct: 212 RNGKQYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIA 271
Query: 421 ---VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEG 477
VE+GR LVV VNK D L V+E ++ + + F SA E
Sbjct: 272 GFVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLDFAKFHFISAAEK 323
Query: 478 RGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYFTQVKARPP 536
G A+M V D Y +LPT +L R L V + + +PK++Y Q PP
Sbjct: 324 TGIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPP 383
Query: 537 TFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
V + +++ R+L +E F L G P+RI RS
Sbjct: 384 IIVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 424
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSAGLE 181
+ I+GRPNVGKS L N LI + ++ P TRD I + G ++ ++D+AGL
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPG--TTRDSIYVDFERNGK-QYTLIDTAGLR 226
Query: 182 TEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+++ + + T ++ I ++D + + D + ++ + + +V
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRAL--VVG 284
Query: 241 MNKCESL--HNGTGSLAGAAAESLMLGFGDPIAISA--ETGLGMTELYEALRPSVED 293
+NK + L H + A A + L F ISA +TG+G AL SV+D
Sbjct: 285 VNKWDGLDPHVRERTKADLARKLKFLDFAKFHFISAAEKTGIG------ALMRSVDD 335
>gi|297565398|ref|YP_003684370.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946]
gi|296849847|gb|ADH62862.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946]
Length = 437
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 235/477 (49%), Gaps = 54/477 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+LFNRL+ +R A+V + P VTRD++E + RFK++D+ GL
Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRHAVVADQPG--VTRDLKEATVESERGRFKLVDTGGL-- 59
Query: 183 EATSGSILD-RTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
SG + + + L +F +D R+ + P DLEV +LR+ + +
Sbjct: 60 --WSGDVWEQKIKEKVEAALEDADLVLFTVDGRADISPADLEVADFLRRKHSNVLLVATK 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
N G L LGFG+P+ S+ G+ EL ED + L
Sbjct: 118 VDDPKHENYLGDL-------WALGFGEPVPTSSSHARGLDEL--------EDKIWSKL-- 160
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
Q S +V +P+++AIVGRPN GKS+LLNA+L E+RV+V E G TRD
Sbjct: 161 PVRQEGESEPEV---------VPIKIAIVGRPNAGKSSLLNAILGEERVIVSEEPGTTRD 211
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
S+ V F+Y G LVDTAG +++ E L++ ++ K++ A +V LV+D
Sbjct: 212 SIDVEFDYGGTLFQLVDTAG-IRKRPETLVEELAIARAHKSIEEADIVFLVIDPANFGDR 270
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A+E G+ +++ V K DL+ K + V +EI + + +P V+
Sbjct: 271 ELKLANEALEAGKPVILTVTKWDLVK--------KDDQPKVRREISERLAHLGHLPRVYV 322
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
S+L G + + Y R T+ LNR+L + + + +P KI + TQ
Sbjct: 323 SSLTGLNLHKLFTEATRLYALARERFETAELNRYLSAWTAKVALPNFKGKPLKIFFVTQP 382
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSSSR 588
+ PPTFV F++ + ++ A +L + ED L +P R+ + R+ G +R
Sbjct: 383 EVAPPTFVFFVNYPEFVTRAFEGYLRNRIGEDLGLAEVPFRMVFKG--RRGGEKETR 437
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL + +V + G+TRD E + LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLFNRLLGKRHAVVADQPGVTRDLKEATVESERGRFKLVDTGGLWSG 62
Query: 382 --WLQREKEKGPASLS 395
W Q+ KEK A+L
Sbjct: 63 DVWEQKIKEKVEAALE 78
>gi|116670099|ref|YP_831032.1| GTP-binding protein EngA [Arthrobacter sp. FB24]
gi|116610208|gb|ABK02932.1| small GTP-binding protein [Arthrobacter sp. FB24]
Length = 516
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 232/473 (49%), Gaps = 53/473 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+ L P + IIGRPNVGKS L NR++ RREA+V +TP VTRD A F V+D
Sbjct: 75 VKLDPVLAIIGRPNVGKSTLVNRILGRREAVVEDTP--GVTRDRVMYSATWNGRNFTVVD 132
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E +A I R A + +F++D G D V K LRK K
Sbjct: 133 TGGWEHDARG--IHARVAEQAEMAVELADAVLFVVDSAVGATATDEAVVKMLRKSK---K 187
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NK + S A LGFG+P +SA G G+ +L + + ++ +Y
Sbjct: 188 PVIMVANKVDDFAQEADS-----ATLWGLGFGEPYPVSALHGRGVADLLDHVMDTLPEY- 241
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
S+ + + + S P ++A++GRPNVGKS+LLN L +RV+V
Sbjct: 242 ------------STIEGL-----ERSGGPRRIALIGRPNVGKSSLLNKLAGSERVVVDNT 284
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD V E GRT VDTAG +R+ +G + ++++ L +A V ++L
Sbjct: 285 AGTTRDPVDEFIELGGRTWRFVDTAGIRRRQHMAQGADFYASLRTQSALEKAEVAVVLLA 344
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+EV A+E GR LV+ NK DLL + + L + EI+ + V
Sbjct: 345 VDEVLSEQDVRILQLAIESGRALVLAFNKWDLLDDERRTYLER--------EIEQDLAHV 396
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
P V SAL G + ++ + + W R+PT RLN +L +++ H + QP
Sbjct: 397 AWAPRVNISALTGWHKDRLVPALDTALESWDKRIPTGRLNAFLGELVAAHPHPVRGGKQP 456
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I + TQ +RPP FV F +G L RF+T+ L+E F G PI + R
Sbjct: 457 RILFGTQASSRPPKFVLFTTG--FLDPGYRRFITRRLRETFGFEGTPIEVNMR 507
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 286 ALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
+LR ++DY L + + QD P KL LAI+GRPNVGKSTL+N +L
Sbjct: 44 SLRAGLDDYELDEEDAALLSGRYDDQDFDGP----VKLDPVLAIIGRPNVGKSTLVNRIL 99
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQ-------REKEKGPASLSVMQ 398
+V G+TRD V + GR +VDT GW R E+ ++ +
Sbjct: 100 GRREAVVEDTPGVTRDRVMYSATWNGRNFTVVDTGGWEHDARGIHARVAEQAEMAVELAD 159
Query: 399 SRKNLMRAHVVALVLDAEEVRAVEEGRGLVVIV-NKMDLLSGRQNSALYKRVKEAVPQEI 457
+ ++ + V A D V+ + + + V++V NK+D + +SA + P
Sbjct: 160 AVLFVVDSAVGATATDEAVVKMLRKSKKPVIMVANKVDDFAQEADSATLWGLGFGEP--- 216
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWC 495
PV SAL GRG ++ V+DT ++
Sbjct: 217 ---------YPV---SALHGRGVADLLDHVMDTLPEYS 242
>gi|229918701|ref|YP_002887347.1| GTP-binding protein EngA [Exiguobacterium sp. AT1b]
gi|229470130|gb|ACQ71902.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 436
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 243/476 (51%), Gaps = 64/476 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V I+GRPN+GKS +FNR+I R ++V + P VTRD G + + +F ++D+ G
Sbjct: 3 IPVVAIVGRPNIGKSTIFNRIIGDRVSIVDDKP--GVTRDRIYGTGEWLNRKFHLIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E + R A + + IFM++ R G+ D EV L + KPIV
Sbjct: 61 IEVGDEPLLVQMRHQAELA--IDEADVIIFMVNGREGITAADEEVANLLFRSN---KPIV 115
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE---ALRPSVEDYM 295
A+NK ++ + E LGFGDP IS GLG+ +L + L P ++Y
Sbjct: 116 LAVNKVDNFE-----MRDLMYEFYSLGFGDPFPISGTHGLGLGDLLDQVFELAPEKDEY- 169
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+DV +Q +++GRPNVGKS+L N++L E+RV+V
Sbjct: 170 ------------EYNEDV-----------IQFSLIGRPNVGKSSLTNSILGEERVIVSNI 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD++ F G+ ++DTAG +R K + SVM+++K + R++VV +VLD
Sbjct: 207 AGTTRDAIDTPFTRDGQEYVIIDTAGMRKRGKVYESTERYSVMRAQKAIERSNVVLVVLD 266
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
EE A E G+ +V++VNK D + ++ K+++E + QE +
Sbjct: 267 GEEGIIEQDKRVAGLAHEAGKAIVIVVNKWDAVE--KDDKTMKKMEEKIRQEFLF----L 320
Query: 465 TGIPVVFTSALEGR---GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQS 520
PVVF SAL + + V+ QV +T+++ R+ TS LN + + + + D+
Sbjct: 321 DYAPVVFLSALTSKRLQTLLPVIKQVAETHRR---RISTSVLNDVIVDAVAMNPTPTDKG 377
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ KI Y TQV PPTFV F++ + L + R+L +++ FD G PI I R
Sbjct: 378 QRLKINYATQVAIEPPTFVLFVNDPELLHFSYKRYLENQIRKAFDFTGTPIHIVAR 433
>gi|330752472|emb|CBL87421.1| GTP-binding protein engA [uncultured Flavobacteriia bacterium]
Length = 435
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 233/470 (49%), Gaps = 57/470 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL REA+ +T TRD + G + +F V+D+ G T
Sbjct: 5 VAIVGRPNVGKSTLFNRLTETREAITDDT--SGTTRDRKYGTVVWTNHQFNVIDTGGWIT 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
++ S G L + +FM+++ G+ LD ++ LR+ KPI+ +
Sbjct: 63 KS-DDSFEAAIRGQVEISLEEADLILFMVEIEVGITDLDQDIANLLRRTG---KPIMLVC 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIA-ISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ++ + G A E LG D I ISA G G EL +A+ ++
Sbjct: 119 NKVDTSAHDVG-----AEEFYRLGLADEIYRISANNGYGTGELLDAVVDALP-------- 165
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
PE +E LP +LA+VG+PNVGKST +N +L E+R +V AG TR
Sbjct: 166 -------------PMPEQEELGLP-KLAVVGKPNVGKSTFINTILGEERNIVTDIAGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDAEE-- 417
DSV H++ G +VDTAG ++++ S +++ K + + V L+LD +
Sbjct: 212 DSVHTHYQMFGFDFEIVDTAGLRKKKQVTDHLEFYSTVRTIKAIDESDVCLLMLDGSDPM 271
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ VE RG+VV+VNK DL+ N+ + + I+ T IP+
Sbjct: 272 GRQDLNIFWQIVESYRGVVVVVNKWDLVEKETNTM------RDMEEMIRERTSPFTDIPI 325
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH---SWKDQSAQPKIK 526
VFTS ++ + + + ++ Q ++PTS LN L ++ + +WK + KIK
Sbjct: 326 VFTSNVKKQRVLQALETALEVRQARASKVPTSELNDLLLPIIDHYPPPAWKGKYV--KIK 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ+ ++ PTF F + + + D RFL L+E +D G+PIR+ R
Sbjct: 384 YVTQIPSQTPTFAFFCNLPQYIRDPYKRFLENQLREHYDFQGVPIRLFFR 433
>gi|313680391|ref|YP_004058130.1| ribosome-associated GTPase enga [Oceanithermus profundus DSM 14977]
gi|313153106|gb|ADR36957.1| ribosome-associated GTPase EngA [Oceanithermus profundus DSM 14977]
Length = 433
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 237/472 (50%), Gaps = 53/472 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+L+NRL+ RR+A+V + + VTRD++E + + +FK++D+ GL +
Sbjct: 4 VVIVGRPNVGKSSLYNRLLGRRDAVVAD--EAGVTRDLKEAVVETERGKFKLVDTGGLWS 61
Query: 183 -EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A I ++ LA+ +F++D R+ L D EV +LR+ ++ +VA
Sbjct: 62 GDAWEPKIKEKVD----RALAEADLVLFLVDGRAELAQADYEVADYLRRKNKPVR-LVAT 116
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
H E LGFGDPI S E G+ EL +A+
Sbjct: 117 KVDHPKHEAY------LGELYALGFGDPIPTSVEHRRGLEELEDAIW------------- 157
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ +V P P+++AI+GRPN GKS+LLNA+L EDRV+V + G TRD
Sbjct: 158 AALPAEEGETEVEVP-------PIRIAIIGRPNAGKSSLLNAILGEDRVIVSDQPGTTRD 210
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
S+ V +Y G LVDTAG +++ E ++ ++ + + A V L +D E+
Sbjct: 211 SIDVELDYGGTRFVLVDTAG-IRKRPETAVEHFAIQRAHRVIQEADVAVLAVDPFELGDR 269
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A++ G+ +++ V K D A+ K + V ++I+ + + +P+V+T
Sbjct: 270 ELKMANEALDAGKPVILAVTKWD--------AVPKEERPEVRRQIREKLAHLEHLPIVYT 321
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
SA G+ + Y K R T+ LNRW++ + + + +P KI + TQ
Sbjct: 322 SAATGQNIHKIFQLATRLYHKARERFDTADLNRWVQVWLTKTRVPNFRGRPLKIFFVTQP 381
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
+ PP FV F++ ++ A ++ ++ED DL +P R+ R + G
Sbjct: 382 EVAPPLFVFFVNQPDFVTRAFENYIKNRIREDLDLREVPFRLAWRGRKGRTG 433
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG---- 381
++ IVGRPNVGKS+L N LL +V EAG+TRD E + LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLYNRLLGRRDAVVADEAGVTRDLKEAVVETERGKFKLVDTGGLWSG 62
Query: 382 --WLQREKEKGPASLS 395
W + KEK +L+
Sbjct: 63 DAWEPKIKEKVDRALA 78
>gi|428779671|ref|YP_007171457.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
gi|428693950|gb|AFZ50100.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
Length = 456
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 245/484 (50%), Gaps = 57/484 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NR R A+V++ P +TRD + D F V+D+ G
Sbjct: 4 LPIVAIIGRPNVGKSTLVNRFTGSRTAIVHDEP--GITRDRLYQPSFWRDRDFLVVDTGG 61
Query: 180 LETEATSGSILD-RTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ + S + + R M A LA+ AIF++D + G+ D E+G WLR+ +
Sbjct: 62 IVFDDDSEFLPEIRQQAMMA--LAEAVAAIFVVDGQEGITAADEEIGNWLRQQ--NVPYF 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALR---PSVEDYM 295
+A+NKCES G AA+ LG G+P+ +S G G +L +A+ P ++D
Sbjct: 118 LAVNKCESSEQGLIQ----AAQFWELGLGEPLPVSGIHGSGTGDLLDAVLSCFPPLDDL- 172
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
P+ DE+++ +AI+GRPNVGKS+LLNAL R +V P
Sbjct: 173 --------------------PDADETEI--NVAIIGRPNVGKSSLLNALTGVSRSIVSPI 210
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ + E+QG++ L+DTAG +++ G S+ ++ K + R V LV+D
Sbjct: 211 SGTTRDAIDLQIEHQGQSYRLIDTAGIRKKKNISYGAEFFSINRAFKAIRRCDVSLLVID 270
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R EEG+ ++IVNK D L + ++ +YK K ++ + +
Sbjct: 271 ALDSITDQDMKLAGRIEEEGKAAIIIVNKWDALE-KDSTTIYKYEK-----MLRDRVYFM 324
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQ 522
++F SAL G+ + + ++ R+ T+ +N +++ + +S Q Q
Sbjct: 325 YWSEILFVSALNGQRVKTIFDSIQTAVKEHRRRVSTAVINEVIQEAVAWYSPPTSRQGKQ 384
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV-PRK 581
+I Y TQV ++PPT F++ K +D R++ + +E G P+R+ R PR+
Sbjct: 385 GRIYYGTQVSSQPPTIALFVNDPKRFNDTYRRYIDRQFREQLGFQGTPLRLIWRGKRPRE 444
Query: 582 CGSS 585
S
Sbjct: 445 VEES 448
>gi|297623927|ref|YP_003705361.1| ribosome-associated GTPase EngA [Truepera radiovictrix DSM 17093]
gi|297165107|gb|ADI14818.1| ribosome-associated GTPase EngA [Truepera radiovictrix DSM 17093]
Length = 439
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 237/480 (49%), Gaps = 62/480 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL--RFKVLDS 177
+ V I+GRPNVGKS+LFNRL+ RREA+V + P VTRD++E + DL F +LD+
Sbjct: 1 MAKVAIVGRPNVGKSSLFNRLVGRREAIVADMP--GVTRDVKEARVE-DDLGRSFTLLDT 57
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
GL + + R A F + D R+ L D EV WLR KP
Sbjct: 58 GGLWSNDEWQEPIKRRIEAALADAALVLFCV---DGRAPLSAADYEVAAWLRNVG---KP 111
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ + L + + E LGFG+P+AISAE G EL + +
Sbjct: 112 TLLL--ATKLDDPRHEESPEFYELYGLGFGEPLAISAEHARGTYELLDTI---------- 159
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + D+ +++AI+GRPNVGKS+LLNAL+ ++RV+V G
Sbjct: 160 ------------FERLPEDADEAEAEEVRVAIIGRPNVGKSSLLNALVGDERVIVADVPG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDSV V F++ GR L+DTAG ++R+ + S ++S + LMR+ V LV+D E
Sbjct: 208 TTRDSVDVRFDFGGRPFVLIDTAG-IRRKPDGDVEYYSKLRSEEALMRSDVAVLVVDPFE 266
Query: 418 V---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG-- 466
+ A++ G+ +V+ +NK DL V + +E + I QV G
Sbjct: 267 LGDHELRLANLALQAGKPVVLTINKWDL------------VPDEALREFEKNIAQVLGHL 314
Query: 467 --IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
P V+TSAL G ++ VI Y R+PTS +N WL R + + +P
Sbjct: 315 DFAPKVYTSALNAYGLHDLLAAVIRVYDTARFRVPTSEVNGWLEVWTQRQAPPNFKGRPL 374
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
K+ Y TQ PPTFV ++ ++ ++ A +++ ++ED +PIR+ +S + G
Sbjct: 375 KLLYGTQADVAPPTFVISVNNEQFVTRAYEQYILNRIREDLGFKEVPIRLIWKSRAKDGG 434
>gi|150390617|ref|YP_001320666.1| GTP-binding protein EngA [Alkaliphilus metalliredigens QYMF]
gi|166920095|sp|A6TS39.1|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF]
Length = 440
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 244/474 (51%), Gaps = 61/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN++I R ++V + P VTRD + D F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKIIGHRISIVEDQP--GVTRDRIYAEVEWLDHYFTLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKT-QFAIFMIDVRSGLHPLDLEVGKWLRK-HAPQIKPI 238
+ A + I+ A + +T +FM+D R+GL D EV + LRK H P +
Sbjct: 62 D--ADTEEIIPAQMREQAQLAIETADVTVFMVDGRAGLTTSDREVAEMLRKSHKPVL--- 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+AMNK + T + + E LG GDPI IS+ GLG+ +L
Sbjct: 117 LAMNKVD-----TSNRLDSFYEFYELGIGDPIEISSAQGLGIGDLL-------------- 157
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D ++ + V +D +++AI+G+PNVGKS+++N++L E+RV+V AG
Sbjct: 158 --DEIVKHFPENKGVIYDDD-----VIKVAIIGKPNVGKSSIVNSILGENRVIVSDIAGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ F L+DTAG ++ K ++ SV++S + RA V LV+DA E
Sbjct: 211 TRDAIDTPFNDGEDQYVLIDTAGLRRKSKIKENIEKYSVIRSIAAVERADVCLLVIDATE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ E G+G +++VNK DL+ + N+ + K +K EI+T + ++
Sbjct: 271 GVTEQDTKVAGFSHENGKGTIIVVNKWDLIE-KDNNTMNKFIK-----EIRTELAYLSYA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW-----KDQSAQ 522
P++F SAL + V+ V + +R+PT LN +V+G + D+ +
Sbjct: 325 PILFISALTRQRMPKVLETVKFISNQRAMRVPTGGLN----EVIGEATLLNQPPSDKGKR 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQ +PPTFV F++ KK + + R++ ++E+F G PIR R
Sbjct: 381 LKIFYGTQGSIKPPTFVLFINDKKLMHFSYERYIENRIRENFGFEGTPIRFIYR 434
>gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC]
gi|330824028|ref|YP_004387331.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
gi|317118270|gb|ADV00759.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans BC]
gi|329309400|gb|AEB83815.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
Length = 447
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 241/473 (50%), Gaps = 55/473 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL + R+A+V + +TRD G + G F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRDAIVADFAG--LTRDRHYGNGRQGKHEFIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A+SG I A T +A+ IF++DVR GL D ++ K+LR+ KP ++
Sbjct: 61 EPDASSG-IYREMAKQTQQAVAEADVVIFVVDVRGGLSAQDHDIAKYLRRLG---KPCVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLRV 298
A NK E + + + AE LG G+ +SA G G+ L E AL+
Sbjct: 117 AGNKAEGMQD-----SAHLAEFYELGLGEVHPVSAAHGQGVRSLVELALK---------- 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
S + DV + + ++LA+ GRPNVGKSTL+N L E+R++ G
Sbjct: 162 ---SLALPEAGEGDVVAEAN-----VIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGT 213
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V FE G+ L+DTAG ++ K + SV+++ + + A+VV L+LDA +
Sbjct: 214 TRDAISVPFERNGQKFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQ 273
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLS--GRQNSALYKRVKEAVPQEIQTVIPQVT 465
+E GR +V+ VNK D + GRQ + + I+T + +
Sbjct: 274 GVTDQDAHIAGYILESGRAVVIAVNKWDAVDDYGRQQ----------LERSIETRLSFLK 323
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPK 524
P+ F SA++ +G + ++ Y+ ++PT L R L++ + S K +PK
Sbjct: 324 FAPLHFISAMKRQGIGPLWASIVQAYKSANRKMPTPVLTRLLQEAVQFQSPKRSGMFRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + ++DA RFL +++FDL G P+RI +S
Sbjct: 384 LRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLEGRFRKEFDLIGTPLRIELKS 436
>gi|378823405|ref|ZP_09846045.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
gi|378597776|gb|EHY31024.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
Length = 487
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 244/477 (51%), Gaps = 47/477 (9%)
Query: 113 TKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRF 172
+I+ +LP + ++GRPNVGKS LFNRL R R+A+V + P +TRD + G ++G +
Sbjct: 35 NRIERTMLPVIALVGRPNVGKSTLFNRLTRSRDAIVADYPG--LTRDRQYGQGRVGPRPY 92
Query: 173 KVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHA 232
V+D+ G E + G I+ AG + + +F+ D R+GL P D + + LR
Sbjct: 93 LVVDTGGFEPVKSEG-IVQAMAGQAELAIEEADVVLFVCDARAGLTPHDARIAQRLRVSG 151
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
++ + +NK E L + A AE LG G+P ISA G G
Sbjct: 152 RKV--FLLVNKAEGLSDV------AKAEFYELGLGEPYLISAAHGQG------------- 190
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+R + D + ++ PED ++ L++ + GRPN GKSTL+NAL+ E+R++
Sbjct: 191 ---VRAVIDLALEGFPEEEEDEEPEDPDAPKRLKVTLAGRPNAGKSTLINALIGEERLIA 247
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVAL 411
G TRD+++V FEY GR LVDTAG ++ K + SV+++ + + A+VV L
Sbjct: 248 FDMPGTTRDAIKVDFEYNGRPYELVDTAGLRKKGKVFEAIEKFSVVKTLQAIDGANVVIL 307
Query: 412 VLDAEEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V+DA+ A +E GR LVV VNK DL+S Y+R E E++ +
Sbjct: 308 VIDAKNGIADHDAHIAGYVLESGRALVVAVNKWDLMSE------YER--EMFGLELERKL 359
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQS 520
+ ++ SAL+ G +M V + + ++PT +L R L + + R + +
Sbjct: 360 HFLRWARMIRISALKRNGLNHLMKAVDEAHAAAYRKIPTPKLTRALLEAVERQQPPRARG 419
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+PK ++ Q + PP V + + + ++ R+L +E FDL G P+RI R+
Sbjct: 420 GRPKPRFAHQGGSNPPVIVVHGNALEDIGESYRRYLESFFREKFDLAGTPLRIEFRT 476
>gi|334127957|ref|ZP_08501859.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
gi|333388678|gb|EGK59852.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
Length = 447
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 239/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 10 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYMDAEWLNHEFTIIDTGGI 67
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D R+GL D EVG+ LR+ KP++
Sbjct: 68 EFDE-SDHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVGRLLRRTQ---KPVIL 123
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPI ISA + + +L +A+ S +
Sbjct: 124 AVNKIDSFDR-----EALIYDFYSLGLGDPIPISASNAMNLGDLLDAIVASFPE------ 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D+ E DE + +A+VGRPNVGKS+L+N LL E+RV+V G T
Sbjct: 173 -DTGE----------GAESDE----IAIAVVGRPNVGKSSLVNRLLGEERVIVSDMPGTT 217
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V++A E
Sbjct: 218 RDAIDTHFVRDGANYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAAVVVMVINAAEG 277
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G++++VNK D+ + + + + +++ + + P
Sbjct: 278 ILEQDTKIAGYVHESGKGVIIVVNKWDIFPDKNDKSTLR-----FTDDLREKLGFLQYAP 332
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 333 VLYTSALTGQRVERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQLKILF 392
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRF+ L+E F G P+R+ R+
Sbjct: 393 VTQVGIAPPTFIIFVNDPELMHFSYLRFIENRLRESFGFEGTPLRLVVRA 442
>gi|292489043|ref|YP_003531930.1| GTP-binding protein engA [Erwinia amylovora CFBP1430]
gi|292900172|ref|YP_003539541.1| GTP-binding protein [Erwinia amylovora ATCC 49946]
gi|428786003|ref|ZP_19003486.1| GTP-binding protein engA [Erwinia amylovora ACW56400]
gi|291200020|emb|CBJ47145.1| GTP-binding protein [Erwinia amylovora ATCC 49946]
gi|291554477|emb|CBA22001.1| GTP-binding protein engA [Erwinia amylovora CFBP1430]
gi|426275398|gb|EKV53133.1| GTP-binding protein engA [Erwinia amylovora ACW56400]
Length = 499
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 235/482 (48%), Gaps = 46/482 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R A + + + +FM+D R+GL P D + K LR A Q
Sbjct: 59 GID--GNEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLR--ARQKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L + A + LG G+ I+A G G+T L E L P +++
Sbjct: 115 IVANKTDGLDADS-----AVVDFWSLGLGEIHPIAASHGRGVTSLLELVLLPWMDEVAPE 169
Query: 298 VLNDSCTQNNS------------STQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNA 343
+N + S +D EDD + LP++LAIVGRPNVGKSTL N
Sbjct: 170 RELTEEEENEAYWAELAAKEAKASGEDTADAEDDFNPLDLPIKLAIVGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L EDRV+V G TRDS+ + E GR L+DTAG +R K + SV+++ K
Sbjct: 230 ILGEDRVVVFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLKA 289
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D LS + V++
Sbjct: 290 IEDANVVMLVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVRDE 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + + F SAL G G + V + Y R+ TS L R +
Sbjct: 342 VKEALDYRLGFIDFARIHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHMAAD 401
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H +S + K+KY PP V + K L D+ R+L + D+ G PI
Sbjct: 402 DHQPPLVRSRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLDIMGTPI 461
Query: 572 RI 573
RI
Sbjct: 462 RI 463
>gi|423141150|ref|ZP_17128788.1| ribosome-associated GTPase EngA [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379053704|gb|EHY71595.1| ribosome-associated GTPase EngA [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 504
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFLNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG G+ I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q + +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDVAPQEEVDEDAEYWAQFEAEQNGEEAPEDDFNPQDLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|417359938|ref|ZP_12134182.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353588052|gb|EHC47197.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
Length = 504
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFFNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG G+ I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q + +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDVAPQEEVDEDAEYWAQFEAEQNGEDAPEDDFDPQSLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|375002358|ref|ZP_09726698.1| ribosome-associated GTPase EngA [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375120071|ref|ZP_09765238.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|417367054|ref|ZP_12139093.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417384846|ref|ZP_12150089.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417392615|ref|ZP_12155390.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417469073|ref|ZP_12165509.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417476923|ref|ZP_12171278.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417519793|ref|ZP_12181849.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417532874|ref|ZP_12187103.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|326624338|gb|EGE30683.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|353077046|gb|EHB42806.1| ribosome-associated GTPase EngA [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353590189|gb|EHC48780.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353607530|gb|EHC61382.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353611267|gb|EHC63980.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353628489|gb|EHC76532.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353639205|gb|EHC84556.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353645690|gb|EHC89321.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353661802|gb|EHD01003.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 504
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFFNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG G+ I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q + +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDVAPQEEVDEDAEYWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|410633389|ref|ZP_11344035.1| GTP-binding protein [Glaciecola arctica BSs20135]
gi|410147104|dbj|GAC20902.1| GTP-binding protein [Glaciecola arctica BSs20135]
Length = 483
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 246/502 (49%), Gaps = 53/502 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK L+F V+D+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGTAKYEGLQFIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ + ++ + A + + +F++D R+G+ D + + LRK Q KP+
Sbjct: 59 GISGDEQGIDVVMAEQSLLA--IIEADVVLFLVDARTGMTAADQGIAEHLRK---QEKPV 113
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
V NK + + + S A+ LG GD I+A G G+T+L + AL P E +
Sbjct: 114 YVVANKVDGIDGDSES-----ADFFALGLGDVNQIAAAHGRGVTQLLQSALAPIAEQFPD 168
Query: 297 RVLNDSCTQNNSSTQDVTSPED--DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + +++ Q++ + E + LP++LAIVG+PNVGKSTL N +L E+RV+V
Sbjct: 169 MHIPE---ESDEELQEIDADEQLANLQALPIKLAIVGKPNVGKSTLTNRILGEERVVVYD 225
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
E G TRDS+ + E GR L+DTAG +R + S++++ + + ++VV V+
Sbjct: 226 EPGTTRDSIFIPMERDGREYILIDTAGVRRRRNISEAIEKFSIVKTLQAIEESNVVLFVV 285
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+E ++ GR LVV VNK D L K VKE + +E+ +
Sbjct: 286 DAQEGITDQDLSLLGFILNAGRSLVVAVNKWD--------GLNKDVKEEIKRELDRRLGF 337
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP 523
+ + F SAL G G + V + Y R+ TS L R + H QP
Sbjct: 338 IDFARLHFISALHGTGVGHLFESVQEAYASATKRVNTSMLTRIMDMAQEDH-------QP 390
Query: 524 --------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
K+KY PP V + K L D+ R+L ++ + G PI+I
Sbjct: 391 PVVRGRRVKMKYAHAGGYNPPLIVIHGNQLKDLPDSYKRYLMNYFRKSLKVMGTPIKIEF 450
Query: 576 RSVPRKCGSSSSRQNTGQKVGR 597
R + S N Q+ R
Sbjct: 451 REGANPYETDHSSLNDSQRRKR 472
>gi|56751772|ref|YP_172473.1| GTP-binding protein EngA [Synechococcus elongatus PCC 6301]
gi|81301149|ref|YP_401357.1| GTP-binding protein EngA [Synechococcus elongatus PCC 7942]
gi|81820595|sp|Q5N167.1|DER_SYNP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123556312|sp|Q31KP9.1|DER_SYNE7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56686731|dbj|BAD79953.1| GTP-binding protein engA [Synechococcus elongatus PCC 6301]
gi|81170030|gb|ABB58370.1| Small GTP-binding protein domain [Synechococcus elongatus PCC 7942]
Length = 453
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 240/475 (50%), Gaps = 59/475 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NRL REA+V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEP--GVTRDRTYQEAFWCDRDFTVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + + L LA+ A+ ++D ++GL D E+ WLR Q +PIV
Sbjct: 61 LVFDDDT-EFLPLIREQAELALAEAALAVLVVDGQAGLTAADNEIADWLRH---QNRPIV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NKCES G A AAE LGFG+P+ IS+ G G EL D +L +
Sbjct: 117 VAVNKCESPDKG----AAQAAEFWSLGFGEPLPISSIHGSGTGELL--------DRVLEL 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L + T+ + +AIVGRPNVGKS+LLN+ L E R +V P AG
Sbjct: 165 LPPADEAAGDETE-------------IGVAIVGRPNVGKSSLLNSFLGEQRAIVSPIAGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ E + LVDTAG ++R++ + GP + +S K + RA V LV+D
Sbjct: 212 TRDAIDTVIERNDQRYRLVDTAG-IRRKRGVDYGPEFFGINRSFKAIRRADVCLLVIDVL 270
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R E+GR V++VNK D + +S +Y+ V ++++ + +
Sbjct: 271 DGVTDQDQKLAGRIEEDGRACVIVVNKWDAHE-KDSSTIYE-----VERQLRDRLYFLDW 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-----QSA 521
P++F SAL G+ ++ QV ++ R+ TS +N L + +W+ Q
Sbjct: 325 APMIFVSALTGQRVEKILDQVNTVVEQHRRRVGTSVINEVLGDAI---AWRTPPTTRQGR 381
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q +I Y TQV +PP+F F++ K ++ R++ + +E G PIR+ R
Sbjct: 382 QGRIYYGTQVTTQPPSFTLFVNDPKLFGESYRRYIERQFRESLGFSGTPIRLFWR 436
>gi|312622952|ref|YP_004024565.1| ribosome-associated GTPase enga [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203419|gb|ADQ46746.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 440
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 233/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G + + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGETEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IFM+D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRASK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A V+
Sbjct: 117 AVNKIDNI-----SQQAMIYEFYELGLSDPIAMSAEHGAGVGDVLDA-----------VV 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N + + ++ T +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 161 NYFNKEGINEIEEGT----------IKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEN 270
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +V VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKVAGYAYEAGKGCIVAVNKWDAVEKDEKTA------DEFKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ V+ Y + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETVLYVYDNYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVGEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|392374271|ref|YP_003206104.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
gi|258591964|emb|CBE68269.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
Length = 439
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 233/473 (49%), Gaps = 63/473 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS LFNRL+ R A+V++ P VTRD + F + D+ G
Sbjct: 3 LPIVTIVGRPNVGKSTLFNRLVGGRRAIVHDQPG--VTRDRLYATVEWKGRAFTLGDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFA-------IFMIDVRSGLHPLDLEVGKWLRKHA 232
LE +G + A VLA+ + A IF++D R GL PLD E+ + LR H
Sbjct: 61 LEPGVGTG--------LAAQVLAQVRQAVQESVLVIFVVDAREGLTPLDEEIARLLR-HD 111
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
Q + +VA NK + + A+E +GF + +SAE GLG+ EL +
Sbjct: 112 VQTRIVVAPNKVDRPTHEV-----LASEFFRIGFAEVCPVSAEHGLGVAELCD------- 159
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
V+ ++ S++ ESK +++ +VGRPNVGKS+L+NALL ++RV+V
Sbjct: 160 -----VIAEALPVTESAS---------ESK-AIRVTVVGRPNVGKSSLVNALLGQERVIV 204
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVAL 411
+AG TRD++ F Y L+DTAG R K + P SV+++ K + R+ V +
Sbjct: 205 SEQAGTTRDAIDTPFTYNDTAYILIDTAGLRSRSKVQQPLERFSVVRALKAIERSDVALI 264
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA++ + G G +V+ NK DL+ ++ ++ EI+ +
Sbjct: 265 LVDAKDGITDQDAKIAAYVQDVGSGAIVVANKWDLMPSGADA------RQQFTLEIRDRL 318
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
V P+ F SAL G + V Q R+ T LN + + + ++
Sbjct: 319 RHVDYAPIAFVSALTGSDVPTLFPLVQSVAQARAHRVSTPHLNELIGEAVQKYPPPAHGK 378
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+P + Y TQ + PPTF+ F+S + + R+L L+ + G PIR+
Sbjct: 379 RPVRFHYATQAASLPPTFLLFVSDPRAVRVPYRRYLVNQLRAAYGFVGTPIRL 431
>gi|445498326|ref|ZP_21465181.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
gi|444788321|gb|ELX09869.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
Length = 448
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 239/473 (50%), Gaps = 54/473 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV + P +TRD G ++G+ F V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I+ A T +A+ +F++D R GL P D + +LRK + ++
Sbjct: 61 EPVAKEG-IMHEMAKQTKQAVAEADIVVFLVDGRQGLTPHDKTITDFLRKSGRPV--MLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + A+ LG G+P +IS+ G G+ +L + L+
Sbjct: 118 VNKSEGMR-----YTAVVADFYELGLGEPYSISSAHGDGVADLVD-----------EALD 161
Query: 301 DSCTQNNSSTQDVTSPED----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ Q PED +++ +++A+VGRPNVGKSTL+N L+ E+RV+
Sbjct: 162 LAFAQR---------PEDAAELEKTDHGIKIALVGRPNVGKSTLINTLVGEERVIAFDMP 212
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ + FE G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA
Sbjct: 213 GTTRDSIEIPFERDGKQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDA 272
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++ + +E GR LV+ VNK D L + ++ + +I + +
Sbjct: 273 QQDISEQDAHIAGFVLETGRALVIAVNKWDGLRTDE--------RDEIKIDIDRKLDFLG 324
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ-SAQPK 524
+ F SAL+ +G +M + Y L T +L R L + + + + + S +PK
Sbjct: 325 FAKMHFISALKAQGIGPLMKSLDQAYAAAFADLSTPKLTRALIEAVEKQEPRRKGSIRPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
++Y Q PP V + + + R+L K ++ F+L G P+RI R+
Sbjct: 385 LRYAHQGGMNPPVIVIHGNALDAVGEPYKRYLEKHFRDTFNLVGTPLRIELRT 437
>gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
Length = 484
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 247/491 (50%), Gaps = 51/491 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LPTV+++GRPNVGKS LFNRL + R+ALV + P +TRD G + V+D+
Sbjct: 1 MLPTVVLVGRPNVGKSTLFNRLTKSRDALVADLPG--LTRDRHYGRGIGASQPYLVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E SG IL A T + + IF++D R G P D+E+ LR+ + +
Sbjct: 59 GFEPNTDSG-ILKAMAVQTLLAIDEADVIIFLVDGRQGATPQDMEIANRLRRSKCPV--L 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NK E ++ A +AE LG GDP++IS+ G G+ ++ D L
Sbjct: 116 LAVNKTEGMNK-----AVVSAEFHELGLGDPLSISSAHGEGVKDII--------DLALES 162
Query: 299 LNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
++ + PE D++ ++P ++AIVGRPNVGKSTL+NALL E+RV+ E
Sbjct: 163 FHEVEEE----------PELDQTGDRIP-KVAIVGRPNVGKSTLVNALLGEERVIAFDEP 211
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRDS+ + E G+ L+DTAG +R + + SV+++ +++ A+VV LV+DA
Sbjct: 212 GTTRDSISIDLEKNGKHYTLIDTAGVRKRGRVLEAIEKFSVIKTIQSIEEANVVILVVDA 271
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+E ++ GR LVV +NK D L + ++ V +EI + +
Sbjct: 272 QEGITEQDAHVAAYILDAGRALVVAINKWD--------GLKEEERDWVKREIDRKLMFLD 323
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPK 524
+ SAL +G + V ++ +L T +L R L + +H + +PK
Sbjct: 324 FAEFHYISALRKKGLPELFKSVDIAFKAAFAKLATPQLTRVLIDALQQHQPPISKGIRPK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS 584
++Y Q + PP V + + DA RFL K+ + F L G P+R+ +
Sbjct: 384 LRYAHQGGSNPPIVVIHGNHVDGVKDAYTRFLEKTFRRTFQLSGTPLRVQYKQGANPFAE 443
Query: 585 SSSRQNTGQKV 595
++ G+ +
Sbjct: 444 DEDKRKPGEGI 454
>gi|284116005|ref|ZP_06386701.1| GTP-binding protein engA [Candidatus Poribacteria sp. WGA-A3]
gi|283829542|gb|EFC33894.1| GTP-binding protein engA [Candidatus Poribacteria sp. WGA-A3]
Length = 435
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 228/469 (48%), Gaps = 49/469 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P V +IGRPNVGKS LFNR++ R A+V + P VTRD RF+V+D+ G
Sbjct: 1 MPLVAVIGRPNVGKSTLFNRILGTRNAIVDDRPG--VTRDRIYAECTYQGRRFQVVDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L+ +T +L + LA + ++D R GL P+D E+ L H
Sbjct: 59 LDPTSTD-DMLGLIRRQSQAALAAADILLVIMDGRDGLTPMDREIVDGL--HGVDKPTFW 115
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK + T +L A+ LG ISAE G G+ EL EA ++L
Sbjct: 116 VVNKVD-----TPALEPLLADFYHLGKDTLFPISAEHGHGVDELLEAFL-----HLLPAH 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + ++ ++A+VGRPNVGKSTL+N +L E+R +V G T
Sbjct: 166 DEDLMETATT----------------RVAMVGRPNVGKSTLVNTILGEERAVVSDVPGTT 209
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD + H E +GRT L DTAG +R + E G SV ++ + L R+ + L+LD E
Sbjct: 210 RDPIDTHLEREGRTFLLTDTAGLRRRGRVEPGIEGYSVARTMRALGRSDIGVLLLDGVEG 269
Query: 419 RAVE----------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ +GRG V++VNK DL R+N + K E+Q P T +P
Sbjct: 270 VTDQDTKIAGLIQRQGRGCVMLVNKWDL---RRNQ---REAKAKFSLELQRQFPFFTFVP 323
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PKIKY 527
++F SAL + + V + + R+PT+RLN +L+K + + + PK Y
Sbjct: 324 ILFGSALAPKTVDHLFDAVTRVMEAFSYRVPTNRLNLFLQKALTDNPLTVKKGNPPKSLY 383
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTF F L+ A LR+L L+ F G P+RI R
Sbjct: 384 MTQVSTKPPTFALFAGKSAVLTPAYLRYLENQLRATFGFEGTPLRIMVR 432
>gi|456063405|ref|YP_007502375.1| small GTP-binding protein [beta proteobacterium CB]
gi|455440702|gb|AGG33640.1| small GTP-binding protein [beta proteobacterium CB]
Length = 454
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 46/465 (9%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS LFNRL R R+ALV + +TRD G ++G+ F +D+ G
Sbjct: 3 PVITIVGRPNVGKSTLFNRLTRSRDALVADF--SGLTRDRHYGKGRIGERAFICVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A +G I+ A T +A++ IF++D R G+ P D + +LRK + I+A
Sbjct: 61 EPVAKTG-IVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPV--ILA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + G A+ LG G+P IS+ G G+ L ++
Sbjct: 118 VNKTEGMQAGV-----VTADFHELGLGEPFPISSAHGDGVRGL---------------ID 157
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D+ + E+D ++ P+++A+VGRPNVGKSTL+N L+ E+RV+ G TR
Sbjct: 158 DALDSLGVPEPEPEELENDPNR-PMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTR 216
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
D++ V FE G+ LVDTAG +R K + SV+++ + + +VV L+LDA++
Sbjct: 217 DAIEVPFERNGKPYILVDTAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDI 276
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ VE GR LVV VNK D L VKE EI + + V
Sbjct: 277 SEQDAHIAGFIVEAGRALVVAVNKWD--------GLDAYVKERARLEIAQKLRFLDFANV 328
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS-AQPKIKYF 528
SA +G G + V Y +LPT +L R L++ + K +PK++Y
Sbjct: 329 HPISAKKGTGLKELFKDVDLAYAAAMAKLPTPKLTRILQEAIEHQQPKRVGMGRPKLRYA 388
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q PP V + ++D+ R+L ++ F L G P+RI
Sbjct: 389 HQGGMNPPIVVIHGTSLSGVTDSYKRYLEGRFRDVFKLRGTPLRI 433
>gi|373464324|ref|ZP_09555863.1| ribosome biogenesis GTPase Der [Lactobacillus kisonensis F0435]
gi|371762526|gb|EHO51055.1| ribosome biogenesis GTPase Der [Lactobacillus kisonensis F0435]
Length = 435
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 154/472 (32%), Positives = 242/472 (51%), Gaps = 55/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+PTV IGRPNVGKS +FNR+ R ++V +TP VTRD + +F ++D+ G
Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTP--GVTRDRIYSHGEWLTTKFAMIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E S + A + + +F++ + GL D +V K L + KP+V
Sbjct: 61 IEISDAPFSTQIKNQAEIA--IDEADVIVFIVSGKEGLTADDEQVAKILYRSD---KPVV 115
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK + N G + LGFGDP+ IS GLG+ +L + + VE +
Sbjct: 116 LAVNKVD---NPEGR--EDIYDFYSLGFGDPMPISGVHGLGLGDLLDKV---VEKF---- 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D +P DD ++ +I+GRPNVGKS+L+NA+L EDRV+V AG
Sbjct: 164 ----------PKTDEKAPNDD-----IRFSIIGRPNVGKSSLVNAILGEDRVIVSDIAGT 208
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ FE G +VDTAG +R K + SVM++ K + ++ V+ V++AEE
Sbjct: 209 TRDAIDTRFEADGIKFTMVDTAGIRKRGKVYENTERYSVMRAMKAIDQSDVILFVMNAEE 268
Query: 418 -VR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+R A E G+ ++ +VNK D L ++ + + + + E Q +
Sbjct: 269 GIREQDKKVAGYAHEAGKAIITVVNKWDTL--KKTNHTQQDFETLIRNEFQYMAYS---- 322
Query: 468 PVVFTSALEGRGRIAVMHQVI-DTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
P++F SA+ + RI + Q+I Y R+ +S LN + + H + + +I
Sbjct: 323 PIIFVSAVT-KQRIEKLPQLIKQVYDNHEKRVQSSALNDVIMAAVAVHPTPTVNGKRLRI 381
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQVK+ PPTFV F++ + + +RFL ++E+FD G PIRI +RS
Sbjct: 382 YYATQVKSGPPTFVVFVNNPDLMHFSYVRFLENQIRENFDFTGTPIRIIKRS 433
>gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
Length = 494
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 238/493 (48%), Gaps = 73/493 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + LRK KP
Sbjct: 59 GID--GTEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIASHLRKIE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+AE LG + I+A G G+T L + AL P E M
Sbjct: 114 MLVVNKVDGI-----DADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLM- 167
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKL-----------------PLQLAIVGRPNVGKST 339
+ + +D+T D++ KL P++LAI+GRPNVGKST
Sbjct: 168 -------EETSGEIEDLTDFIDEDEKLDYSEEEAEEEFKRLQDQPIKLAIIGRPNVGKST 220
Query: 340 LLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQ 398
L N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV++
Sbjct: 221 LTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVK 280
Query: 399 SRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKR 448
+ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 TLKAVEDANVVMLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDMD 332
Query: 449 VKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLR 508
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R ++
Sbjct: 333 VKEQVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMK 392
Query: 509 KVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSL 560
H QP K+KY PP V + L D+ R+L
Sbjct: 393 MATDDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVNELPDSYKRYLMNYY 445
Query: 561 KEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 446 RKSLEIMGTPIRI 458
>gi|422358126|ref|ZP_16438787.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
gi|422380260|ref|ZP_16460439.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
Length = 499
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D RSGL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|312794132|ref|YP_004027055.1| ribosome-associated gtpase enga [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344995690|ref|YP_004798033.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
gi|312181272|gb|ADQ41442.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343963909|gb|AEM73056.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
Length = 440
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 233/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G + + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGETEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IFM+D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A V+
Sbjct: 117 AVNKIDNI-----SQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDA-----------VV 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N + + ++ T +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 161 NYFDKEGINEIEEST----------IKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTED 270
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +V VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKVAGYAYEAGKGCIVAVNKWDAVEKDEKTA------DEYKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ V+ Y + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETVLYVYGNYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVGEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|33860948|ref|NP_892509.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|41017012|sp|Q7V2S6.1|DER_PROMP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33639680|emb|CAE18850.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 458
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 239/472 (50%), Gaps = 53/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP++ IIGRPNVGKS L NRL + +A+V++ P VTRD A F+V+D+ G
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKP--GVTRDRTYQNASWAGREFQVVDTGG 60
Query: 180 LETEATSGSILD-RTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L E S + + RT A L + A+F++D G+ DL + KWLR A K I
Sbjct: 61 LVFEDDSEFLPEIRTQVFLA--LEEASLALFVVDGNQGVTDGDLSIAKWLRNSA--CKTI 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
VA+NKCES G A+E LG G+P +SA G G +L + V D +
Sbjct: 117 VAVNKCESTSLG----VSLASEFWKLGLGEPYPVSAIHGSGTGDLLDL----VIDGFPKD 168
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
LN ED E K+ ++I+GRPNVGKS+LLNA+ E R +V +G
Sbjct: 169 LN---------------VEDKEDKI--MMSIIGRPNVGKSSLLNAICGEKRAIVSDISGT 211
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
T DS+ + +VDTAG ++R+K + G + ++ K++ R+ V LV+DA
Sbjct: 212 TTDSIDTLIKKDSHLWKIVDTAG-IRRKKNVKYGTEFFGINRAFKSIDRSDVCVLVIDAI 270
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R E+GR V++VNK DL+ + NS +Y+ V +E+++ + +
Sbjct: 271 DGVTDQDQKLAGRIEEQGRACVIVVNKWDLVE-KNNSTIYQ-----VEKELRSKLYFLHW 324
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPK 524
++F SAL G+ + + + R+ TS +N L++ +G S K Q +
Sbjct: 325 SKMIFISALTGQRVQNIFEHALSAVTQHRRRVTTSVVNEVLKEALGWKSPPTKRSGKQGR 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ Y TQVK +PPTF F++ K R++ K ++ + G PI + R
Sbjct: 385 LYYGTQVKNQPPTFTLFVNDPKLFGITYRRYIEKQIRLNLGFEGSPIILLWR 436
>gi|418411892|ref|ZP_12985158.1| GTPase Der [Staphylococcus epidermidis BVS058A4]
gi|410891475|gb|EKS39272.1| GTPase Der [Staphylococcus epidermidis BVS058A4]
Length = 436
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKIYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
Length = 494
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 248/518 (47%), Gaps = 74/518 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + + LRK KP
Sbjct: 59 GID--GTEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAQHLRKLE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+AE LG + I+A G G+T L + AL P E +
Sbjct: 114 MLVVNKVDGI-----DADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLL- 167
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDE-SKL-----------------PLQLAIVGRPNVGKS 338
++ +D+T ED+E KL P++LAI+GRPNVGKS
Sbjct: 168 -------EESKGELEDLTGFEDEEQDKLDYTEEEAEQEFNRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAVEDANVVMLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDT 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMATDDH-------QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVNELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGR 597
++ ++ G PIRI +S S++ Q+ R
Sbjct: 446 YRKSLEIMGTPIRIIFQSSDNPFEGKSNKMTLSQERKR 483
>gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417955681|ref|ZP_12598690.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342812335|gb|EGU47339.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 495
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 247/518 (47%), Gaps = 74/518 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + LRK KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG + I+A G G+ L + AL P E
Sbjct: 114 MLVVNKVDGI-----DADAASADFWQLGVENMYQIAAAHGRGVGALIDRALNPFAEKM-- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPED-DESKL-----------------PLQLAIVGRPNVGKS 338
+ +D+T ED DE KL P++LAI+GRPNVGKS
Sbjct: 167 ------AEEAKGEIEDLTEFEDLDEEKLDYTEEEAEEEFKRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R++ + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDT 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMATDDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVNELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGR 597
++ ++ G PIRI +S +++ Q+ R
Sbjct: 446 YRKSLEIMGTPIRIQFQSSDNPFEGKTNKMTMSQERKR 483
>gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1]
gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89]
gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1]
gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
Length = 503
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D RSGL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|417647073|ref|ZP_12296922.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU144]
gi|418614698|ref|ZP_13177660.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU118]
gi|418616308|ref|ZP_13179233.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU120]
gi|418630503|ref|ZP_13192984.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU128]
gi|418633106|ref|ZP_13195523.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU129]
gi|420163147|ref|ZP_14669894.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM095]
gi|420167877|ref|ZP_14674529.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM087]
gi|420178180|ref|ZP_14684513.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM057]
gi|420179842|ref|ZP_14686119.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM053]
gi|420183144|ref|ZP_14689277.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM049]
gi|420184456|ref|ZP_14690565.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM040]
gi|420190097|ref|ZP_14696041.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM037]
gi|420199417|ref|ZP_14705095.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM031]
gi|420204398|ref|ZP_14709956.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM015]
gi|420211145|ref|ZP_14716519.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM001]
gi|420213941|ref|ZP_14719221.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05005]
gi|420215938|ref|ZP_14721163.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05001]
gi|329725422|gb|EGG61905.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU144]
gi|374819234|gb|EHR83362.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU118]
gi|374821134|gb|EHR85201.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU120]
gi|374837693|gb|EHS01256.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU128]
gi|374839925|gb|EHS03432.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU129]
gi|394234836|gb|EJD80410.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM095]
gi|394237905|gb|EJD83391.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM087]
gi|394246806|gb|EJD92058.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM057]
gi|394249607|gb|EJD94820.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM049]
gi|394252437|gb|EJD97472.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM053]
gi|394257107|gb|EJE02029.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM040]
gi|394258988|gb|EJE03858.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM037]
gi|394272199|gb|EJE16668.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM031]
gi|394273408|gb|EJE17839.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM015]
gi|394281598|gb|EJE25824.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM001]
gi|394283863|gb|EJE28024.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05005]
gi|394292934|gb|EJE36667.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05001]
Length = 436
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|114332129|ref|YP_748351.1| GTP-binding protein EngA [Nitrosomonas eutropha C91]
gi|122313190|sp|Q0AE46.1|DER_NITEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114309143|gb|ABI60386.1| small GTP-binding protein [Nitrosomonas eutropha C91]
Length = 468
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 236/475 (49%), Gaps = 60/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+A+V + P +TRD G +LG + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPG--LTRDRHYGHGRLGLKPYLVVDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E SG IL A T + + +F++D R GL D + LRK +I I+
Sbjct: 61 EPVVKSG-ILHAMARQTLQAVDEADVVLFIVDGRQGLASQDKIIADQLRKTGRKI--ILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + T AA E LG G P +SA G + EL + ++EDY
Sbjct: 118 VNKAEGMPYST-----AAVEFHELGLGTPCVVSALHGEHLGELIDF---ALEDY------ 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+D+ + E + K P+ +AI GRPNVGKSTL+N LL E+R++ + G TR
Sbjct: 164 -------PYAEDIEA-EPGQEKHPV-IAIAGRPNVGKSTLINTLLGEERMIAFDQPGTTR 214
Query: 361 DSVRVHFEYQGRTVYLVDTAG-------WLQREKEKGPASLSVMQSRKNLMRAHVVALVL 413
DS+ + FEY R L+DTAG W EK SV+++ +++ A+VV LVL
Sbjct: 215 DSIYIDFEYGQRRYTLIDTAGLRRSGKVWETVEK------FSVVKTLQSIEAANVVVLVL 268
Query: 414 DAE----EVRA------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA+ E A +E GR LV+ +NK D + Q ++ +E + +
Sbjct: 269 DAQSGISEQDAHIAGFILETGRALVIAINKWDGMDDYQ--------RDTTKREFERKLAF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQ 522
+ + + SAL G G A+M V Y +PT +L R L V + + ++
Sbjct: 321 LNFANLHYISALYGNGVKALMPSVDAAYTAAMAHIPTPKLTRVMLAAVAKQQPPRGGVSR 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
PK++Y Q PP + S + R+L + ++ F+L G P+R+ R+
Sbjct: 381 PKLRYAHQGGENPPLIIVHGSMLDHVPQTYRRYLENTFRDVFELKGTPLRVEFRT 435
>gi|253988871|ref|YP_003040227.1| gtp-binding protein enga (double era-like domain protein)
[Photorhabdus asymbiotica]
gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein)
[Photorhabdus asymbiotica]
Length = 499
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 236/486 (48%), Gaps = 57/486 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 6 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGQEFIIIDTG 63
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + A + + + +FM+D R+GL P D + K LR +
Sbjct: 64 GID--GTEDGVETHMAAQSLMAIEEADIVLFMVDARAGLMPADHAIAKHLRSR--EKATF 119
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRP-SVEDYML 296
+ NK + + T + AE LG GD +I+A G G+T+L E L P S +D
Sbjct: 120 LVANKTDGIDIDT-----SIAEFYSLGLGDIYSIAASHGRGVTQLIERVLLPFSGKDEEE 174
Query: 297 RVLNDSCT----------QNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQ 346
V QN S + + D S LPL+LAIVGRPNVGKSTL N +L
Sbjct: 175 EVELTEEQANAAYWAEQEQNESEMAEEEEDDFDPSTLPLKLAIVGRPNVGKSTLTNRILG 234
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
E+RV+V G TRDS+ + E GR L+DTAG +R K + SV+++ + +
Sbjct: 235 EERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIED 294
Query: 406 AHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV LV+DA E + ++ GR LV+ VNK D +S + KE V +
Sbjct: 295 ANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMS--------QEDKEQVKE 346
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
+ + V V F SAL G G + +++ Y R+ TS L R +R
Sbjct: 347 MLDYRLGFVDFARVHFISALHGSGVGNLFDSILEAYDCATRRVSTSLLTRIMR------- 399
Query: 516 WKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
++ QP K+KY PP V + LSD+ R+L + ++
Sbjct: 400 MAEEDHQPPMIRGRRVKMKYAHAGGYNPPIVVIHGNQVTNLSDSYKRYLMNYFRRSLNVM 459
Query: 568 GIPIRI 573
G PIRI
Sbjct: 460 GTPIRI 465
>gi|256825342|ref|YP_003149302.1| small GTP-binding domain-containing protein [Kytococcus sedentarius
DSM 20547]
gi|256688735|gb|ACV06537.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Kytococcus sedentarius DSM 20547]
Length = 527
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 229/471 (48%), Gaps = 53/471 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+ LP V I+GRPNVGKS L NR + RREA+V + P VTRD A+ + F V+D
Sbjct: 88 VQSLPVVAIVGRPNVGKSTLVNRFLGRREAVVQDEPG--VTRDRVTYPAEWNGVPFMVMD 145
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E +A I A + IF++D G D +V K LR+ K
Sbjct: 146 TGGWEIDAKG--IQKHVAQQAEVAVELADVVIFVVDATVGATDADEDVVKLLRRSR---K 200
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NK + LH L G AA +G G P +SA G G +L +
Sbjct: 201 PVLLVANKVDDLH-----LEGEAAALWSMGLGQPWPLSALHGKGSGDLLD---------- 245
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
VL + S V P ++A++GRPNVGKS+LLN L +RV+V
Sbjct: 246 -EVLAKFPAEPQSDAGRVVGG-------PRRVALLGRPNVGKSSLLNRLAGSERVVVDNV 297
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD V + E GRT VDTAG +R + +G + ++++ L +A V +++D
Sbjct: 298 AGTTRDPVDEYIELGGRTWMFVDTAGIRRRVHQTRGVDFYASLRTQSALEKAEVAVVLID 357
Query: 415 A------EEVRAVEE----GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A +++R V++ GR LV+ NK D + L + EI+ + QV
Sbjct: 358 AGEEIAEQDIRVVQQVIDSGRALVIAYNKWDTTDEERRHYLER--------EIERDLVQV 409
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
P V SA GR ++ + + W R+PT RLN +L +V+ H +S QP
Sbjct: 410 PWAPRVNMSATRGRHVDKLVPALDQALESWDARIPTGRLNAFLGEVVAAHPHPVRSGKQP 469
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+I + TQ +RPP FV F SG L + RFL + L+E F G PI I+
Sbjct: 470 RILFATQASSRPPKFVVFASG--FLEHSYRRFLERKLRERFGFEGSPIEIS 518
>gi|27468081|ref|NP_764718.1| GTP-binding protein EngA [Staphylococcus epidermidis ATCC 12228]
gi|57867002|ref|YP_188620.1| GTP-binding protein EngA [Staphylococcus epidermidis RP62A]
gi|251810897|ref|ZP_04825370.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060]
gi|282876093|ref|ZP_06284960.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135]
gi|293366558|ref|ZP_06613235.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656170|ref|ZP_12305861.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU028]
gi|417659723|ref|ZP_12309323.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU045]
gi|417908683|ref|ZP_12552440.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU037]
gi|417912175|ref|ZP_12555870.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU105]
gi|417913665|ref|ZP_12557328.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU109]
gi|418605774|ref|ZP_13169081.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU041]
gi|418606655|ref|ZP_13169925.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU057]
gi|418609700|ref|ZP_13172836.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU065]
gi|418613256|ref|ZP_13176270.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU117]
gi|418621880|ref|ZP_13184645.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU123]
gi|418625080|ref|ZP_13187738.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU125]
gi|418627787|ref|ZP_13190357.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU126]
gi|418629103|ref|ZP_13191617.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU127]
gi|418664556|ref|ZP_13226024.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU081]
gi|419769438|ref|ZP_14295532.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771816|ref|ZP_14297862.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-K]
gi|420170194|ref|ZP_14676755.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM070]
gi|420172533|ref|ZP_14679032.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM067]
gi|420187316|ref|ZP_14693337.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM039]
gi|420197361|ref|ZP_14703085.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM020]
gi|420201610|ref|ZP_14707220.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM018]
gi|420206201|ref|ZP_14711711.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM008]
gi|420208986|ref|ZP_14714424.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM003]
gi|420220831|ref|ZP_14725788.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04008]
gi|420221735|ref|ZP_14726661.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH08001]
gi|420225677|ref|ZP_14730504.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH06004]
gi|420227265|ref|ZP_14732037.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05003]
gi|420229584|ref|ZP_14734290.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04003]
gi|420231999|ref|ZP_14736641.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051668]
gi|420234643|ref|ZP_14739203.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051475]
gi|421607026|ref|ZP_16048276.1| GTP-binding protein Der [Staphylococcus epidermidis AU12-03]
gi|37999682|sp|Q8CP62.1|DER_STAES RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71151866|sp|Q5HP70.1|DER_STAEQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27315626|gb|AAO04760.1|AE016747_257 GTP binding protein [Staphylococcus epidermidis ATCC 12228]
gi|57637660|gb|AAW54448.1| GTP-binding protein, Era/TrmE family [Staphylococcus epidermidis
RP62A]
gi|251805577|gb|EES58234.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060]
gi|281295118|gb|EFA87645.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135]
gi|291319327|gb|EFE59696.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735360|gb|EGG71652.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU045]
gi|329737420|gb|EGG73674.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU028]
gi|341651186|gb|EGS74991.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU105]
gi|341654687|gb|EGS78425.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU109]
gi|341656044|gb|EGS79767.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU037]
gi|374401477|gb|EHQ72550.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU041]
gi|374406639|gb|EHQ77531.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU065]
gi|374407431|gb|EHQ78293.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU057]
gi|374410366|gb|EHQ81124.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU081]
gi|374816191|gb|EHR80398.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU117]
gi|374825968|gb|EHR89884.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU125]
gi|374828308|gb|EHR92147.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU123]
gi|374828934|gb|EHR92757.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU126]
gi|374834534|gb|EHR98173.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU127]
gi|383358057|gb|EID35518.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-250]
gi|383360635|gb|EID38030.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-K]
gi|394240532|gb|EJD85955.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM070]
gi|394241694|gb|EJD87103.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM067]
gi|394256295|gb|EJE01228.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM039]
gi|394266168|gb|EJE10814.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM020]
gi|394271878|gb|EJE16357.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM018]
gi|394278040|gb|EJE22357.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM008]
gi|394279214|gb|EJE23522.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM003]
gi|394285719|gb|EJE29792.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04008]
gi|394290146|gb|EJE34013.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH08001]
gi|394293111|gb|EJE36834.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH06004]
gi|394297355|gb|EJE40956.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH05003]
gi|394299350|gb|EJE42901.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH04003]
gi|394301721|gb|EJE45175.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051668]
gi|394303886|gb|EJE47296.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIH051475]
gi|406657319|gb|EKC83708.1| GTP-binding protein Der [Staphylococcus epidermidis AU12-03]
Length = 436
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERISIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|410657630|ref|YP_006910001.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|410660665|ref|YP_006913036.1| GTP-binding protein EngA [Dehalobacter sp. CF]
gi|409019985|gb|AFV02016.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|409023021|gb|AFV05051.1| GTP-binding protein EngA [Dehalobacter sp. CF]
Length = 443
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 244/472 (51%), Gaps = 55/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNR++ A+V NTP VTRD A+ +F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGGLVAIVENTP--GVTRDRLYYDAEWLGRKFTLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + + + + + + +F++D +SG+ P D ++ ++LRK + KP++
Sbjct: 62 EFKDETTPLSSKMKQQAEIAVDEADVIMFLVDAKSGITPDDQQIARYLRKSS---KPVLL 118
Query: 241 M-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+ NK E A E L LGFGDPI +SA G+ +L D ++ VL
Sbjct: 119 VANKVEKFTR----FEAEAHEFLPLGFGDPIPVSAVHGMNTGDLL--------DTLVSVL 166
Query: 300 NDSCTQNNSSTQDVTSPED---DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
PED D +++A++GRPNVGKS+++N LL E+RV+V
Sbjct: 167 ----------------PEDAAADYDPDVIKIAVIGRPNVGKSSIVNILLGEERVIVSDIP 210
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ F Y+ R L+DTAG +++K + + SV++S + + R+ VV +V++A
Sbjct: 211 GTTRDAIDTPFTYEDRNYVLIDTAGIRRKKKISEVTENYSVVRSFRAVDRSDVVLMVINA 270
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A E G+GL++++NK DL+ ++ + ++ + +E+ V+
Sbjct: 271 IEGVTDQDKKIVGYAHEAGKGLILVINKWDLVI--KDEKTINKYEKDIREELAFVLYA-- 326
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPK 524
P F SA G+ +M V ++ R+ TS LN LR+ V D+ + K
Sbjct: 327 --PTQFVSAKTGQRINKIMDLVEFVAEQTSRRISTSTLNNLLREWVHLNPPPSDKGVRLK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQ +PPTF+ F++ + + + R+L L+++F G PIR+ R
Sbjct: 385 ILYATQSSVQPPTFIFFVNDPELVHFSYKRYLENQLRKNFGFEGSPIRMIMR 436
>gi|416125227|ref|ZP_11595825.1| small GTP-binding domain protein [Staphylococcus epidermidis
FRI909]
gi|319400824|gb|EFV89043.1| small GTP-binding domain protein [Staphylococcus epidermidis
FRI909]
Length = 436
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|328950011|ref|YP_004367346.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884]
gi|328450335|gb|AEB11236.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884]
Length = 431
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 238/465 (51%), Gaps = 52/465 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V+I+GRPNVGKS+L+NRL+ RR+A+V + P VTRD++E + + RFK++D+ GL +
Sbjct: 4 VVIVGRPNVGKSSLYNRLLGRRDAVVADEPG--VTRDLKEAVIETDRGRFKLVDTGGLWS 61
Query: 183 -EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+A I ++ + +F++D R+ D EV +LR+ P +VA
Sbjct: 62 GDAWEPKIQEKVD----RAIQDADLVLFLVDGRADPTQADFEVADYLRRQ-PTPVLLVAT 116
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
+ H E LGFG PI S E G+ L +A+ +
Sbjct: 117 KVDDPKHEQY------LGELYALGFGAPIPTSVEHRRGLDALVDAIWERL---------- 160
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
Q+ + +V + L+LAI+GRPN GKS+L+NA+L E+RV+V + G TRD
Sbjct: 161 PVRQDEDAEPEVEA---------LRLAIIGRPNAGKSSLMNAILGEERVIVSEQPGTTRD 211
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEEV--- 418
++ V F+Y G+ LVDTAG +++ E ++ +S + + A VV LV+D E+
Sbjct: 212 AIDVEFDYGGQRFVLVDTAG-IRKRPETAVEYFAIQRSHRVIREADVVVLVVDPFELGDR 270
Query: 419 ------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFT 472
A+E GR ++ V+K D + + +RV+ EI+ + + +P+++T
Sbjct: 271 ELKMANEALEAGRPTILAVSKWDRVPKDEA----RRVR----AEIREKLAHLERLPLIYT 322
Query: 473 SALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFTQV 531
SA+ G+ ++ + + Y R TS LNRWL + R + +P KI + TQ
Sbjct: 323 SAVTGQNLHKLLSEAVRLYHLARTRFETSELNRWLDVWLMRTRVPNFKGKPLKIFFATQP 382
Query: 532 KARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ PPTFV F++ + ++ A +L + ED L IP R+ R
Sbjct: 383 EVAPPTFVFFVNHPEFVTRAFENYLKNRIGEDLGLREIPFRLVFR 427
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%)
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
++ IVGRPNVGKS+L N LL +V E G+TRD E LVDT G
Sbjct: 3 KVVIVGRPNVGKSSLYNRLLGRRDAVVADEPGVTRDLKEAVIETDRGRFKLVDTGG 58
>gi|401565470|ref|ZP_10806308.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
gi|400187219|gb|EJO21415.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
Length = 441
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 242/475 (50%), Gaps = 60/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYMDAEWLNHEFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D R+GL D EV + LR+ KP++
Sbjct: 62 EFDE-SDHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVARLLRRTK---KPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLM-----LGFGDPIAISAETGLGMTELYEALRPSVEDY 294
A+NK +S ESL+ LG GDPI ISA + + +L +A+ + +
Sbjct: 118 AVNKIDSFDR----------ESLIYDFYALGLGDPIPISASNAMNLGDLLDAIVAAFPEE 167
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
M +D E DE + +A+VGRPNVGKS+L+N LL E+RV+V
Sbjct: 168 M----SDGT-------------ESDE----IAIAVVGRPNVGKSSLVNRLLGEERVIVSD 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVL 413
G TRD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V+
Sbjct: 207 VPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAGVVLMVI 266
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
+A E E G+G++++VNK D+ + + + + +++ +
Sbjct: 267 NAAEGILEQDTKIAGYVHESGKGVIIVVNKWDIFPEKHDKSTLR-----FTDDLREKLGF 321
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ PV++TSAL G+ V V ++ +R+ TS LN +R + + + Q
Sbjct: 322 LQYAPVLYTSALTGQRVERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI + TQV PPTF+ F++ + + + LRF+ L+E F G P+R+ R+
Sbjct: 382 LKILFVTQVGIAPPTFIVFVNDPELMHFSYLRFIENRLRESFGFEGTPLRLVVRA 436
>gi|441501604|ref|ZP_20983694.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
gi|441434627|gb|ELR68081.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
Length = 434
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 239/469 (50%), Gaps = 56/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
V I+GRPNVGKS LFNRLI +R+A++ DD VTRD G A+ F V+D+ G
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEKRKAIM----DDESGVTRDRHYGYAEWTGKHFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
T + + + +FM+D GL LD + + LR KPI +
Sbjct: 61 VT-GSEDKFETEIRHQVELAIDEASVILFMVDSHMGLTDLDKDFARVLRTSK---KPIYL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK + T A+E LG G+ +S+ +G G +L
Sbjct: 117 VANKAD-----TTEYMHMASEFYALGMGEIYPVSSASGSGTGDLL--------------- 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D ++ Q ED ES +P ++AI+GRPNVGKS+ LNALL ++R +V EAG T
Sbjct: 157 -DRVVEHFDEGQ-----EDPESGIP-RIAILGRPNVGKSSFLNALLGKERSIVTDEAGTT 209
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDAE-- 416
RD++ H++ G+ L DTAG ++ K K SV++S + L + V ++DAE
Sbjct: 210 RDAINTHYKLYGKDFILTDTAGIRKKSKVKEDIEFYSVLRSIQALQDSDVCIFIIDAERG 269
Query: 417 -EVR-------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E + A++ +G++++VNK DL+ N+A ++ ++A+ Q++ Q+ IP
Sbjct: 270 LEAQDMSIINLALKYRKGIMIMVNKWDLIEKENNTA--EQYRKAIVQKLG----QLDYIP 323
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QSAQPKIKY 527
++FTS ++ + + + I+ Y+ ++PTSRLN + + ++ + KIKY
Sbjct: 324 IIFTSVVKKQRIFQAIEKAINIYEARTTQVPTSRLNEVILPEIEKYPPPAIKGKYIKIKY 383
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ+ ++ P F F + + + RFL ++++FD G+PIR+ R
Sbjct: 384 ITQLHSKTPAFAFFCNLPQYIKAPYERFLENKIRKNFDFEGVPIRLFFR 432
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P + I+GRPNVGKS+ N L+ + ++V T + TRD KL F + D+AG
Sbjct: 174 IPRIAILGRPNVGKSSFLNALLGKERSIV--TDEAGTTRDAINTHYKLYGKDFILTDTAG 231
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ ++ ++ + + + L + IF+ID GL D+ + K+ I +
Sbjct: 232 IRKKSKVKEDIEFYSVLRSIQALQDSDVCIFIIDAERGLEAQDMSIINLALKYRKGI--M 289
Query: 239 VAMNK---CESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
+ +NK E +N A + LG D I I + + +++A+ ++ Y
Sbjct: 290 IMVNKWDLIEKENNTAEQYRKAIVQK--LGQLDYIPIIFTSVVKKQRIFQAIEKAINIYE 347
Query: 296 LR 297
R
Sbjct: 348 AR 349
>gi|378980072|ref|YP_005228213.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|421911298|ref|ZP_16341061.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421917092|ref|ZP_16346656.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|428149843|ref|ZP_18997652.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|364519483|gb|AEW62611.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|410114834|emb|CCM83686.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410120809|emb|CCM89281.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|427540199|emb|CCM93790.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 489
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 236/483 (48%), Gaps = 62/483 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+ G++
Sbjct: 2 VALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTGGID- 58
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVAM 241
T + R A + + + +FM+D R+GL P D+ + K LR KP +
Sbjct: 59 -GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKLLRSRE---KPTFLVA 114
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY--MLRV 298
NK + + + A A+ LG GD I+A G G+T L E AL P V++ V
Sbjct: 115 NKTDGI-----DVDQAMADFWSLGLGDIYPIAASHGRGVTSLLEQALLPWVDEVNPQEEV 169
Query: 299 LNDS-------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDR 349
D+ QN + ++ PEDD LP++LAIVGRPNVGKSTL N +L EDR
Sbjct: 170 DEDAEYWAKFEAEQNGEAEEE---PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDR 226
Query: 350 VLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHV 408
V+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+V
Sbjct: 227 VVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANV 286
Query: 409 VALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 287 VLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLD 338
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD 518
+ + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 339 YRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVSTAMLTRIMNMAAEDH---- 394
Query: 519 QSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
QP K+KY PP V + K L D+ R+L ++ D+ G P
Sbjct: 395 ---QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTP 451
Query: 571 IRI 573
IRI
Sbjct: 452 IRI 454
>gi|374308439|ref|YP_005054870.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
gi|291166767|gb|EFE28813.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
Length = 437
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 249/470 (52%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L+ R A+V +TP VTRD G A+ F V+D+ G+
Sbjct: 3 PIVAIVGRPNVGKSTLFNKLVGSRVAIVEDTP--GVTRDRIYGEAEWLTDYFTVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAI-FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ + S I+ A + T I F+++ R G+ P D E+ + LR+ KPIV
Sbjct: 61 DND--SDDIIPAQMRRQAELAMDTADVILFVVNGRDGVTPQDREIAEQLRRTK---KPIV 115
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ++ +L + LG G+P+ ISA GLG+ +L L V
Sbjct: 116 LAVNKVDN-----KNLPDYFYDFYELGVGEPLPISASVGLGIGDL------------LDV 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ ++ ++++ +E+K +++AIVG+PN GKS+++N +L E+RV+V P AG
Sbjct: 159 VAENFPKDSNM---------EENKDVIKVAIVGKPNAGKSSIINRILGEERVIVSPIAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ +F + + +DTAG ++ K ++ SV++S + RA VV +V+DA
Sbjct: 210 TRDAIDTYFHVKDQEYLFIDTAGIRKKSKIDENIEKYSVIRSYAAVERADVVLIVIDANI 269
Query: 416 ---EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + G+ V++VNK DL+ + N ++ + E++ QE +P ++
Sbjct: 270 GISEQDSKIAGLAHNAGKSTVIVVNKWDLVE-KDNKSI-QTYTESIRQE----LPFMSYA 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIK 526
P++F S G+ ++ + YQ+ R+PT LN + V+ D+ + KI
Sbjct: 324 PIIFVSTTTGQRFGKIIESINAVYQESQKRVPTGLLNDVIGEAVVMNQPPSDKGRRLKIY 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPTF F++ ++ + R+L ++E+F G P+ +R
Sbjct: 384 YATQVSVQPPTFTIFINDRELFHFSYQRYLENQIRENFGFEGSPVIFLKR 433
>gi|451818097|ref|YP_007454298.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784076|gb|AGF55044.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 438
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 236/470 (50%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL +R ++V +TP VTRD A+ F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTP--GVTRDRVYAEAEWLSYNFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKT-QFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E I+ + AN+ +T +F++D + GL P D EV LRK KP+V
Sbjct: 62 EPE--RDDIIVKQMRRQANIAIETADVIVFIVDGKEGLTPADNEVATMLRKSK---KPVV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +SL A E LG GDP+ ISA GLG+ ++ L VE +
Sbjct: 117 LVVNKVDSLKEEDN-----AWEFYNLGIGDPVTISASQGLGLGDM---LDKVVEGF---- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + E+DE +++A++G+PNVGKS+L+N LL EDRV+V G
Sbjct: 165 -----------DKSIFEEEEDEY---IRIAMIGKPNVGKSSLINKLLGEDRVIVSDVPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ H E + L+DTAG ++ K K SV+++ + RA V L++DA E
Sbjct: 211 TRDAIDSHLETEEGKFILIDTAGLRRKSKVKEEIERYSVVRTYAAIERADVCILMIDATE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E + ++VIVNK DL+ + + L K +E+Q + ++
Sbjct: 271 GITEQDEKIIGYAHEMRKAIMVIVNKWDLVE-KDDKTLDK-----FKKELQGNLKFLSYA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIK 526
+F SAL G+ V+H Y + R+ T LN + K ++ + + KI
Sbjct: 325 EYLFISALTGQRTNKVLHMAKYCYDNYNKRVSTGILNDVISKAILMKEPPVVGIKRMKIY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV RPP FV F++ + + R+L L++ FD G I+I R
Sbjct: 385 YATQVATRPPKFVFFVNDESARHFSYERYLENQLRDSFDFKGTGIQIEYR 434
>gi|242242754|ref|ZP_04797199.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144]
gi|420174755|ref|ZP_14681203.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM061]
gi|420192231|ref|ZP_14698091.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM023]
gi|242233890|gb|EES36202.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144]
gi|394244659|gb|EJD89994.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM061]
gi|394261442|gb|EJE06239.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM023]
Length = 436
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + + E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDIRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|304436527|ref|ZP_07396500.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370470|gb|EFM24122.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 442
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 238/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYLDAEWLNHEFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D R+GL D EV + LR+ KP++
Sbjct: 62 EFDE-SDHILRSMRSQAELAMEEADVILFLVDGRAGLTTSDEEVARLLRRTK---KPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPI ISA + + +L +A+ + +
Sbjct: 118 AVNKIDSFER-----EALIYDFYSLGLGDPIPISASNAMNLGDLLDAVVAAFPE------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ S E DE + +A+VGRPNVGKS+L+N LL E+RV+V G T
Sbjct: 167 -----------EPAESQETDE----IAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V++A E
Sbjct: 212 RDAIDTHFTKDGAKYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAGVVLMVINAAEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G++++VNK D+ + + + + +++ + + P
Sbjct: 272 ILEQDTKIAGYVHESGKGVIIVVNKWDIFPEKNDKSTLR-----FTDDLREKLGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 327 VLYTSALTGQRVERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQLKILF 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRF+ L+E F G PIR+ R+
Sbjct: 387 VTQVSIVPPTFIIFVNDPELMHFSYLRFIENRLRESFGFEGTPIRLVVRA 436
>gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Photobacterium angustum S14]
gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Photobacterium angustum S14]
Length = 500
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 233/491 (47%), Gaps = 63/491 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+L + F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAELEEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +F++D R+GL D + K LR KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK + + + A AE LG I+A G+T L E D +
Sbjct: 114 FLVVNKVDGIDADS-----ACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNA 168
Query: 298 VLNDSCTQNNSSTQDVTSPEDDE----------------SKLPLQLAIVGRPNVGKSTLL 341
L ++ + S +D+TS ED E + P++LAI+GRPNVGKSTL
Sbjct: 169 ELAENGEEQEVSIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLT 228
Query: 342 NALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSR 400
N +L E+RV+V G TRDS+ + E G+ L+DTAG +R+ + SV+Q+
Sbjct: 229 NRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTL 288
Query: 401 KNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVK 450
K + A+VV LV+DA E A+ GR LV+ VNK D L VK
Sbjct: 289 KAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWD--------GLDNEVK 340
Query: 451 EAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKV 510
E V E+ + V + F SAL G G + VI+ YQ R+ TS L R ++
Sbjct: 341 ERVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMA 400
Query: 511 MGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKE 562
H QP K+KY PP V + L + R+L ++
Sbjct: 401 QDDH-------QPPMIRGRRVKLKYAHAGGYNPPIIVVHGNQVNDLPGSYKRYLMNYYRK 453
Query: 563 DFDLGGIPIRI 573
++ G PIRI
Sbjct: 454 SLEMMGTPIRI 464
>gi|149926362|ref|ZP_01914623.1| GTP-binding protein EngA [Limnobacter sp. MED105]
gi|149824725|gb|EDM83939.1| GTP-binding protein EngA [Limnobacter sp. MED105]
Length = 441
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 235/469 (50%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL R R+ALV N P +TRD G+ ++G + V+D+ GL
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRDALVANQPG--LTRDRHYGVGRIGPREYLVVDTGGL 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E A G I A + + ++ +F++D R G+ P D + LRK ++ I+
Sbjct: 61 EPVAKDG-IYAEMAKQSRQAIVESDLVLFLVDGRQGVTPHDHVIAAELRKAKREV--ILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E T S+A AA+ LG G+P ISA G G+ +L + + L VL
Sbjct: 118 VNKTEGY---THSMA--AADFFELGLGEPETISASHGDGVRQLMD-----IACEKLPVL- 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
PED+ +++AI GRPNVGKST++N LL E+RV+ G TR
Sbjct: 167 ---------------PEDEAGGRRIKVAIAGRPNVGKSTMVNTLLGEERVIAFDLPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + FE + L+DTAG +R K + SV+++ + + A+VV L+LDA++
Sbjct: 212 DSIYIDFERNDKPYTLIDTAGLRKRGKVFESVEKFSVIKTLQAIEDANVVILMLDAQQDI 271
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ VE GR LV+ VNK D L + KE + E+ + +
Sbjct: 272 SDQDASIAGFIVEAGRSLVLAVNKWDSLDDYR--------KERIKAEVGRKLTFLNYAKF 323
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIKYF 528
+ SA + G A+M V + + +L T +L R +++ V + + +PK++Y
Sbjct: 324 HYVSATKPFGIAAMMKSVDEAHAAAFAKLSTPKLTRLIQECVEHQQPPRKGIFRPKLRYA 383
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q PP + + + D R+L ++E F L G P+R+ RS
Sbjct: 384 HQGGQNPPIVIVHGTALDAIPDNYKRYLETRIRERFKLDGTPLRVEFRS 432
>gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 498
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 242/490 (49%), Gaps = 61/490 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVT------SPEDDESKL------PLQLAIVGRPNVGKSTLLNA 343
D ++ + +D + ED E++ P++LAI+GRPNVGKSTL N
Sbjct: 169 TSESEDGEIEDLTGFEDEEPLVEDYTEEDAEAEFKRLQEQPIKLAIIGRPNVGKSTLTNR 228
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV+++ K
Sbjct: 229 ILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKA 288
Query: 403 LMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E A+ GR +V+ VNK D L VKE+
Sbjct: 289 VEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDSDVKES 340
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V +E+ + V + F SAL G G + + + Y R+ TS L R ++ +
Sbjct: 341 VKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRIMKMAVD 400
Query: 513 RHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDF 564
H QP K+KY PP V + + L D+ R+L ++
Sbjct: 401 DH-------QPPMVRGRRIKLKYAHAGGYNPPIVVIHGNMVRELPDSYKRYLMNYFRKSL 453
Query: 565 DLGGIPIRIT 574
++ G PIRI
Sbjct: 454 EIMGTPIRIN 463
>gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 495
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 240/494 (48%), Gaps = 74/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + LRK A KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADIAISNHLRKLA---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG D I+A G G+ L + AL P E+ +
Sbjct: 114 MLVVNKVDGI-----DADAASADFWQLGVDDMYQIAAAHGRGVGALIDRALNPFAEEMI- 167
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGKS 338
Q +D+T D + ++ P++LAI+GRPNVGKS
Sbjct: 168 -------AQEQGVIEDLTDFVDQDEEVLEYTEEEAEQEFQRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R++ + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDM 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEHVKKELDRRLGFVDFARLHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMATDDH-------QPPMVRGRRVKLKYAHAGGYNPPLVVIHGNQVNELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 446 YRKSLEIMGTPIRI 459
>gi|403511332|ref|YP_006642970.1| ribosome-associated GTPase EngA [Nocardiopsis alba ATCC BAA-2165]
gi|402799280|gb|AFR06690.1| ribosome-associated GTPase EngA [Nocardiopsis alba ATCC BAA-2165]
Length = 477
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 235/484 (48%), Gaps = 66/484 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V ++GRPNVGKS+L NR++ RREA+V + P VTRD A+ RF ++D+ G
Sbjct: 20 LPVVAVVGRPNVGKSSLVNRILGRREAVVEDVP--GVTRDRVAYDAEWQTRRFTLVDTGG 77
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFA-------IFMIDVRSGLHPLDLEVGKWLRKHA 232
ET AG+ A V + ++A +F++D G+ D V + LR
Sbjct: 78 WETS---------VAGLAAMVARQAEYAAQTADVILFVVDATVGITDADAAVTRVLRATK 128
Query: 233 PQIKPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
+P+V A NK + G A + LG G P ISA G G +L +AL S
Sbjct: 129 ---RPVVLAANKVDG-----GQQEADALDLWNLGVGRPFPISALHGRGTGDLLDALVSSF 180
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ + P ++A++GRPNVGKS+LLN L EDRV+
Sbjct: 181 PEVPEGDDDRDGEDG-----------------PPRVALLGRPNVGKSSLLNRLAGEDRVV 223
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVA 410
V AG TRD+V E G+T +DTAG +R + +G + M++ L RA V
Sbjct: 224 VDSVAGTTRDAVDELIELGGKTWKFIDTAGIRRRFRALQGADYYATMRTGTALERAEVAV 283
Query: 411 LVLDAEE------VRAVEE----GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+++D E +R VE+ GRGLV+ NK D+L + L K EI
Sbjct: 284 VLMDVSEPLAEQDIRVVEQVVEAGRGLVLAFNKWDILDEERRIYLEK--------EIDRQ 335
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ +V+ P V SA GR ++ + + W R+PT +LN WL++++ +
Sbjct: 336 LSRVSWAPRVNISAATGRHMERLVPAIETSLNGWNQRIPTGQLNNWLKELVAATPPPVRG 395
Query: 521 A-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
QPKI + TQ A PP F+ F +G L + RF+ + L+EDF G P+ I+ R
Sbjct: 396 GKQPKILFATQAGACPPHFILFTTG--FLEENYRRFIERRLREDFGFEGTPVHISMRIRE 453
Query: 580 RKCG 583
+K G
Sbjct: 454 KKNG 457
>gi|365873837|ref|ZP_09413370.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
gi|363983924|gb|EHM10131.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
Length = 440
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 237/473 (50%), Gaps = 54/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS+LFNRL+ ++ A+V + P VTRD + RF ++D+ G
Sbjct: 1 MSVVAIVGRPNVGKSSLFNRLVGKKLAIVEDIP--GVTRDRLYAETEWDGKRFYLVDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E A+ D L + IF++D + G+ D + + LR+ + + +V
Sbjct: 59 IEP-ASPHPFQDAIRRQVEIALKECDVVIFLLDGKEGVTAGDEAIAEMLRRSSKPV--VV 115
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
AMNK ++ L ++ LGF + IS E G+ M +L +A+
Sbjct: 116 AMNKIDNPKREDNVL-----DAYSLGFPLVMGISVEHGINMGDLLDAV------------ 158
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
SS D EDDE + + +IVGRPNVGKS+L N L+ E+R +V P G T
Sbjct: 159 -------ASSLPDDEPVEDDEGAI--RFSIVGRPNVGKSSLFNRLIGEERAVVSPIPGTT 209
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAE 416
RD+V V F++ ++DTAG R K + SL SV+++ K + R+HV L++DA
Sbjct: 210 RDTVDVDFQWNQLKFRIMDTAGL--RRKSRVDDSLEYYSVVRTLKAIDRSHVALLLMDAS 267
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E + E G+GLV+ VNK DLL+ ++ L R+++ + E +P ++
Sbjct: 268 EMLTEQDKRLMLHVEERGKGLVIGVNKWDLLTPSED--LGDRIRDRIRDE----LPTLSY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG--RHSWKDQSAQPK 524
P+VF SA GRG V + Y RL T+ LNR LR + R + K
Sbjct: 322 APMVFLSAKTGRGIQKVPELIARAYNNRLRRLKTADLNRLLRDTLQFERMPGDGKGRYLK 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
I Y TQ PPTF+ F++ ++ + R L K ++ D G PIRI R+
Sbjct: 382 IYYVTQADMAPPTFIFFVNHRELADRSFTRRLEKLIRSMGDFEGTPIRIWFRN 434
>gi|424815436|ref|ZP_18240587.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
Length = 499
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 464
>gi|87303080|ref|ZP_01085878.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
gi|87282247|gb|EAQ74207.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
Length = 455
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 235/473 (49%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL R REA+V++ P R +EG GD RF+V+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGF--WGDRRFRVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + S L LA+ A+ ++D + GL D + WLR ++ ++
Sbjct: 61 LVFDDDS-EFLPEIREQANLALAEASVAVVIVDGQQGLTGADQAIADWLRGQ--KVPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AA+ LG G+P A+SA G G +L + V Y+
Sbjct: 118 AVNKCESPDQGLA----MAADFWGLGLGEPHAVSAIHGAGTGDLLD----KVIGYLPTTP 169
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ + +QLAI+GRPNVGKS+LLN++ E R +V P G T
Sbjct: 170 EEETEEP------------------IQLAIIGRPNVGKSSLLNSICGEARAIVSPIRGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E +G+T L+DTAG +R GP + +S K + R+ V LV+DA +
Sbjct: 212 RDTIDTTIEREGKTWKLLDTAGIRRRRSVSYGPEYFGINRSFKAVERSDVCVLVIDALDG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R E+GR V++VNK D + ++ A+ +E++ + + P
Sbjct: 272 VTEQDQRVAGRIEEDGRACVIVVNKWDAIEKDSHTM------AAMEKELRAKLYFLDWAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-----QSAQP 523
++FTSAL G+ ++ + ++ R+ TS +N L++ + SW+ Q
Sbjct: 326 MLFTSALTGQRVESIFALALLAVEQHRRRVTTSVVNEVLQEAV---SWRSPPTSRGGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV RPP+F F++ K + R++ + ++E G PIR+ R
Sbjct: 383 RIYYGTQVATRPPSFTLFVNDPKLFGETYRRYVERQIREGLGFDGSPIRLFWR 435
>gi|317484901|ref|ZP_07943790.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6]
gi|316923839|gb|EFV45036.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6]
Length = 452
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 252/490 (51%), Gaps = 68/490 (13%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDS 177
+LP + ++GRPNVGKS LFNRLIR A+ ++ P VTRD EG+ + R F ++D+
Sbjct: 1 MLPKIALLGRPNVGKSTLFNRLIRSNRAITHDRPG--VTRDRMEGVVRSRSGRSFTLIDT 58
Query: 178 AGLETEATSGSILDRTAGM---TANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKW 227
G+ T + S+ D G+ A +L +TQ A+ ++D R GL P D + +
Sbjct: 59 GGV-TLDSHHSVADGPEGLRGFEAEILQQTQAAMDEASVFCLVVDGRDGLMPFDEHLASF 117
Query: 228 LRKHAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPI-AISAETGLGMTELYE 285
+R+ KP ++ +NK + + + LA E LGF PI A+SAE G + L
Sbjct: 118 VRRAG---KPTLLVVNKVDGMEHEDTMLA----EFHALGF--PILALSAEHGHNIRAL-- 166
Query: 286 ALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
E+ M+ +L + ++V L+LA++GRPN GKS+L+NA++
Sbjct: 167 ------EEEMVDLLPVEDPDAEAKPENV-----------LRLAMLGRPNAGKSSLVNAMI 209
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDR++V AG TRDSV + F GR VDTAG +R + SV S K
Sbjct: 210 GEDRMIVSDVAGTTRDSVDIPFVSDGRACEFVDTAGVRRRTRITDTVERFSVNSSLKTTT 269
Query: 405 RAHVVALVLDAEEVRAVEEGR----------GLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
+A V V+DA E ++ R +++VNK+DL+ ++ +AL K KE
Sbjct: 270 KADVTLYVIDALEGVTAQDKRLIDLLDERKTPFMILVNKIDLVGRKEQAALEKNFKE--- 326
Query: 455 QEIQTVIPQVTGIPVVFTSALE--GRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V+ +PV+ SA++ G GRI + I ++ R+ T LNR + +V+
Sbjct: 327 -----VLQFCPHVPVLMVSAMKQVGLGRIVPLAAQI--REECNTRIGTGALNRAMEEVLT 379
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
+H + ++PK Y TQ + PPTFV F+S +S+ R+L +SL++ F + PI
Sbjct: 380 KHQPPVVKRSRPKFFYLTQAEVAPPTFVFFVSDADRVSETYARYLDRSLRKIFRIEHAPI 439
Query: 572 RITQRSVPRK 581
R+ RS +K
Sbjct: 440 RVRLRSSHKK 449
>gi|312128144|ref|YP_003993018.1| ribosome-associated gtpase enga [Caldicellulosiruptor
hydrothermalis 108]
gi|311778163|gb|ADQ07649.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
hydrothermalis 108]
Length = 440
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 232/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G + + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGETEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IFM+D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A V +Y+
Sbjct: 117 AVNKIDNI-----SQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDA----VVNYL---- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++ +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 164 ------NKEGINEIEEG-------TIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEN 270
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +V VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKVAGYAYEAGKGCIVAVNKWDAVEKDEKTA------DEYKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ V+ Y + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETVLYVYGNYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVGEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|331005663|ref|ZP_08329030.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
gi|330420521|gb|EGG94820.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
Length = 482
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 233/471 (49%), Gaps = 36/471 (7%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL RRR+A+V + +TRD + G + RF +D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRRRDAIVADFAG--LTRDRQYGEVIWEERRFLFVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GL + I A + + + +FM+D ++GL P D+ + K LR + K +
Sbjct: 59 GLSGDEEG--IDSAMAEQSLLAIEEADLVLFMVDCKAGLLPSDIAIAKHLR--TTEKKVL 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK + + + G E LG G+ A +A G G+ L + + D L V
Sbjct: 115 IVANKVDG--HDPDVVIGPFYE---LGLGEIHATTATHGRGVNLLMQQV-----DTCLPV 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ D T+N + D T ED+E +++AIVGRPNVGKSTL+N +L EDRV+V EAG
Sbjct: 165 VIDDVTENITEDVDTTEGEDEEQLAAIKIAIVGRPNVGKSTLVNRMLGEDRVVVYDEAGT 224
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ +++E G+ ++DTAG +R+ S++++ +++ A+VV L+LDA E
Sbjct: 225 TRDSIYINYERHGKPYTIIDTAGIRRRKNISLTVEKFSIVKTLQSIEDANVVVLLLDASE 284
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR LVV +NK D L KE V E++ + V
Sbjct: 285 GVVDQDLHLMGHVIESGRALVVALNKWD--------GLEAEFKEYVKSELERRLRFVDFA 336
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
+ F SAL G G + + + R T+ L L+ H + + K++
Sbjct: 337 DMHFISALHGTGVGNLYKSIEKAFASATDRFSTNHLTNVLQMATKEHQPPVVRGHRIKLR 396
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y PP V + + +R+L K+ + DL G PIR+ R+
Sbjct: 397 YAHAGGHNPPIIVIHGNQTADIPGHYVRYLEKTFRRVLDLHGTPIRLQFRT 447
>gi|193215037|ref|YP_001996236.1| GTP-binding protein EngA [Chloroherpeton thalassium ATCC 35110]
gi|238692727|sp|B3QZ96.1|DER_CHLT3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193088514|gb|ACF13789.1| small GTP-binding protein [Chloroherpeton thalassium ATCC 35110]
Length = 435
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 247/479 (51%), Gaps = 71/479 (14%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNR++ +R A+V + P VTRD A+ +F ++D+ G
Sbjct: 3 PTVAIVGRPNVGKSTLFNRILNKRVAIVDDVP--GVTRDRNFSEAEWCGKQFSLIDTGGY 60
Query: 181 ET--EATSGSILDRT--AGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ S ++L+++ A AN++ I ++D+R+G+ +DLE+ + LRK A +
Sbjct: 61 SRTGDTFSAAVLEQSLIALQEANII------ILVVDLRTGITDIDLEITELLRKQASEKT 114
Query: 237 PIVAMNKCESLHNGTGSLAGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
+A+NK ++ +L + A+ LG +P +SA G G+ EL +A+ +
Sbjct: 115 VFLAVNKVDN------NLMESDAQLFRKLGLSEPYFVSALDGRGVAELLDAVIAHI---- 164
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
PEDD ES ++L ++GRPNVGKS+ +NA+L ++R +V
Sbjct: 165 --------------------PEDDAPESDDTVKLTVIGRPNVGKSSFVNAILGQNRQIVT 204
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALV 412
G TRD+V F+ G+ L+DTAG ++ K L S +++ K + R V ++
Sbjct: 205 DIPGTTRDAVDSRFKRNGQDFLLIDTAGLRRKAKVDDNIELFSALRTEKAIERCDVAIIL 264
Query: 413 LDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA + A ++ RG+V+ VNK DL+ +A+ A + ++ +
Sbjct: 265 LDATQGLENQDLKVINAAAQKKRGMVIAVNKWDLIEKDDKTAI------AYEKRLREELR 318
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVID-TYQKWC---LRLPTSRLNRWLRKVMGRHSWKD 518
++ +P++F SAL + RI ++ ID YQ W +++ TSRLN + + R
Sbjct: 319 NLSYVPLLFISALT-KQRI---YKAIDIAYQVWQNRRMKIDTSRLNNLMLNDIKRTPPSS 374
Query: 519 QSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+S + KIKY TQ+ PP F F + + + RFL + L+E F G PI + R
Sbjct: 375 KSGKEIKIKYLTQLATEPPLFGLFAGNPQLIEEHYKRFLERKLREHFGFEGTPIELKFR 433
>gi|254228662|ref|ZP_04922086.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|262395114|ref|YP_003286968.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|451970701|ref|ZP_21923926.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
gi|151938841|gb|EDN57675.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|262338708|gb|ACY52503.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|451933429|gb|EMD81098.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
Length = 498
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 240/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDAAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDE------------------SKLPLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------TSESEEGEIEDLTGFEDEEPLVEDYTEEDAEAEFKRLQEQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE+V +E+ + V + F SAL G G + + + Y R+ TS L R
Sbjct: 335 SDVKESVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ + H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMAVDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVIHGNMVRELPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|417342951|ref|ZP_12123630.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357955994|gb|EHJ81605.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 504
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 235/490 (47%), Gaps = 54/490 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF +N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++
Sbjct: 7 DFFNEALNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGR 64
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F +D+ G++ T + R A + + + +FM+D R+GL P D + K LR
Sbjct: 65 EFICIDTGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRS 122
Query: 231 HAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALR 288
KP + NK + L A + LG G+ I+A G G+ L E L
Sbjct: 123 RE---KPTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL 174
Query: 289 PSVEDYMLRVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLN 342
P ++D + D Q +PEDD LP++LAIVGRPNVGKSTL N
Sbjct: 175 PWMDDVAPQEEVDEDAEYWAQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTN 234
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 235 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQ 294
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + VKE
Sbjct: 295 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKE 346
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R+ T+ L R + +
Sbjct: 347 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAV 406
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 407 EDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 459
Query: 564 FDLGGIPIRI 573
++ G PIRI
Sbjct: 460 LEVMGTPIRI 469
>gi|222528757|ref|YP_002572639.1| GTP-binding protein EngA [Caldicellulosiruptor bescii DSM 6725]
gi|222455604|gb|ACM59866.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725]
Length = 440
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 232/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G + + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGETEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IFM+D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A V +Y+
Sbjct: 117 AVNKIDNI-----SQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDA----VVNYL---- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++ +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 164 ------NKEGINEIEEG-------TIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEN 270
Query: 419 ----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +V VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKVAGYAYEAGKGCIVAVNKWDAVEKDEKTA------DEYKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ V+ Y + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETVLYVYGNYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVCEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227]
Length = 503
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 235/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + +NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVVNKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|238926984|ref|ZP_04658744.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
gi|238885218|gb|EEQ48856.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
Length = 441
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 235/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYLDAEWLTHEFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D RSGL D EV + LR+ KP++
Sbjct: 62 EFDE-SDHILRSMRSQAELAMEEADVILFLVDGRSGLTTSDEEVARLLRRTK---KPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPI ISA + + +L +A+ +
Sbjct: 118 AVNKIDSFER-----EALIYDFYSLGLGDPIPISASNAMNLGDLLDAVVAAFP------- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T P + + + +A+VGRPNVGKS+L+N LL E+RV+V G T
Sbjct: 166 --------------TEPAEVQETDEIAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V++A E
Sbjct: 212 RDAIDTHFTKDGAKYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAGVVLMVINAAEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G++++VNK D+ + + + + +++ + + P
Sbjct: 272 ILEQDTKIAGYVHESGKGVIIVVNKWDIFPEKNDKSTLR-----FTDDLREKLGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
V++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 327 VLYTSALTGQRVERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQLKILF 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRF+ L+E F G PIR+ R+
Sbjct: 387 VTQVSIVPPTFIIFVNDPELMHFSYLRFIENRLRESFGFEGTPIRLVVRA 436
>gi|428298257|ref|YP_007136563.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
gi|428234801|gb|AFZ00591.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
Length = 455
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/472 (32%), Positives = 240/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL + A+V++ P +TRD + D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFMNRLSGEQTAIVHDEP--GITRDRTYMPSFWRDREFLVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R M A LA+ AIF+++ ++GL D E+ +WLR+ + +
Sbjct: 61 LVFNDDTEFLPLIRQQAMLA--LAEASAAIFVVNGQTGLCAADEEITEWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G AAE LG G+P ISA G G EL D ++
Sbjct: 117 LAVNKCESPDQGLIQ----AAEFWSLGLGEPFPISAIHGSGTGELM--------DKLITY 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L D+ S+ ++V DE +++AI+GRPNVGKS+LLNA + E+R +V P +G
Sbjct: 165 LPDT-----SNIEEV-----DE----IKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E+ G+T ++DTAG +++ E G S+ ++ K + R+ VV +V+DA +
Sbjct: 211 TRDAIDTIVEHDGQTYRIIDTAGIRKKKNVEYGAEFFSINRAFKAIRRSDVVLMVIDAID 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +E+GR V++VNK D + + + +Y K +++ +
Sbjct: 271 GVTDQDQKLAGRIIEDGRACVIVVNKWDAVE-KDSYTIYDHQK-----QVEQRLNFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
++F SA G+ ++ V + R+ TS +N L + + HS Q KI
Sbjct: 325 DMIFVSAQSGQRVDKILDLVKPAAESHKRRVSTSVVNEVLEEAVRWHSPPVSRSGKQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV + PP F++ +D R++ + +E G PIR+ RS
Sbjct: 385 YYGTQVSSGPPAIALFVNDATRFNDNYKRYIERQFREQLGFKGTPIRLFWRS 436
>gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605]
gi|386630281|ref|YP_006150001.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
gi|386635201|ref|YP_006154920.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073]
gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605]
gi|355421180|gb|AER85377.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
gi|355426100|gb|AER90296.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
Length = 503
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|297544868|ref|YP_003677170.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842643|gb|ADH61159.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 439
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 240/468 (51%), Gaps = 53/468 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFN+++ +R ++V + P VTRD G A+ + +F ++D+ GL+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKP--GVTRDRICGNAEWLNKKFILVDTGGLDP 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+A I + + ++ +F++D + GL P D E+ LR+ +I I+ N
Sbjct: 64 DAED-IIFSKVRLQVEAAIEASEVILFLVDAKEGLMPEDEEIADILRRAKKEI--ILVCN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K ++ L + LG G+PI ISA GLG+ EL D +++ L
Sbjct: 121 KVDNFK----ELPPTYYDFFSLGLGNPIPISASNGLGIGELL--------DEIVKKLPQE 168
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ + T +++A++GRPNVGKS+L+N +L E+RV+V G TRD+
Sbjct: 169 GLEYSEET--------------IKIAVIGRPNVGKSSLVNKILGEERVIVSDIPGTTRDA 214
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ F G+ L+DTAG R K + S+ SV+++ + R+ + L++DA E
Sbjct: 215 IDTPFSKDGKNYVLIDTAGI--RRKSRISESIERYSVLRALTAIERSDICLLMIDAIEGP 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+G++++VNK D + N+ + I+ + ++ P+
Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAIKKNNNTV------NEYTKMIREKLSFISFAPI 326
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKYF 528
+F SA G+ V+ V + ++ R+ T LN L + M D+ Q K+ Y
Sbjct: 327 LFISAKTGQRVHRVLQTVDKVWGEYNKRITTGLLNNVLNEAMLMFPPPADKGKQLKVYYT 386
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+QV +PP+FV F++ + + + LRF+ +L+++F G+P++I+ R
Sbjct: 387 SQVGIKPPSFVVFVNDPELMHFSYLRFMENTLRQNFGFEGVPLKISTR 434
>gi|116620165|ref|YP_822321.1| GTP-binding protein EngA [Candidatus Solibacter usitatus Ellin6076]
gi|116223327|gb|ABJ82036.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 441
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 229/476 (48%), Gaps = 68/476 (14%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV+I+GRPNVGKS LFNR+ +R A+V + P +TRD G A+ F+++D+ G+
Sbjct: 6 PTVVIVGRPNVGKSTLFNRITGQRRAIVGDEPG--ITRDRLHGAAEHDGRHFELIDTGGI 63
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA-------IFMIDVRSGLHPLDLEVGKWLRKHAP 233
++ + A +L + +FA IF++D R+ + D ++ + L+K
Sbjct: 64 --------VVHDQEYIPAQILKQAEFALKAADHIIFLVDGRAEITGSDRDLAQMLKKLG- 114
Query: 234 QIKPI-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
KP+ +A+NK ++ E LG D AISAE G G+
Sbjct: 115 --KPVSLAVNKIDAQ-----VRQDLVNEFYGLGIADVFAISAEHGTGV------------ 155
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D ML + + + T + T P+ +++AI+GRPNVGKSTLLNAL DR +V
Sbjct: 156 DAMLDRVTEGFARGEKPTAESTEPKG------IKVAIIGRPNVGKSTLLNALTGADRAIV 209
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVAL 411
P AG TRD+V + G+ VDTAG ++ K A LSV+ +R+++ AHVV L
Sbjct: 210 SPIAGTTRDAVDETVSHDGQEYVFVDTAGIRRKGKTHDMAEKLSVVMARRHIRMAHVVLL 269
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
VLDA E A E GR +++ VNK D + G+ K Q+I+
Sbjct: 270 VLDATEGVVALDTTIAGYAHEGGRAVIICVNKWDEVKGQAAQK-----KNEFEQQIRDEF 324
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
+ PVVF SA G + + + Y+ R+ T LNR++ +
Sbjct: 325 KFLDYAPVVFLSAKSGSNVPKLFRLIKEIYESASKRVTTGELNRFVDHL--------HFE 376
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ KI Y TQ RPP F F L + R+L L++ F G PI + ++
Sbjct: 377 ERKIFYITQHSIRPPAFAVFTDKGPALHFSHERYLVNQLRKQFGFKGTPILLQTKA 432
>gi|289578647|ref|YP_003477274.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9]
gi|289528360|gb|ADD02712.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9]
Length = 439
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 240/468 (51%), Gaps = 53/468 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFN+++ +R ++V + P VTRD G A+ + +F ++D+ GL+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKP--GVTRDRICGNAEWLNKKFILVDTGGLDP 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
+A I + + ++ +F++D + GL P D E+ LR+ +I I+ N
Sbjct: 64 DAED-IIFSKVRLQVEAAIEASEVILFLVDAKEGLMPEDEEIADILRRAKKEI--ILVCN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K ++ L + LG G+PI ISA GLG+ EL D +++ L
Sbjct: 121 KVDNFK----ELPPTYYDFFSLGLGNPIPISASNGLGIGELL--------DEIVKKLPQE 168
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ + T +++A++GRPNVGKS+L+N +L E+RV+V G TRD+
Sbjct: 169 GLEYSEET--------------IKIAVIGRPNVGKSSLVNKILGEERVIVSDIPGTTRDA 214
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ F G+ L+DTAG R K + S+ SV+++ + R+ + L++DA E
Sbjct: 215 IDTPFSKDGKNYVLIDTAGI--RRKSRISESIERYSVLRALTAIERSDICLLMIDAIEGP 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+G++++VNK D + N+ + I+ + ++ P+
Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAIKKNNNTV------NEYTKMIREKLSFISFAPI 326
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKYF 528
+F SA G+ V+ V + ++ R+ T LN L + M D+ Q K+ Y
Sbjct: 327 LFISAKTGQRVHRVLQTVDKVWGEYNKRITTGLLNNVLNEAMLMFPPPADKGKQLKVYYT 386
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+QV +PP+FV F++ + + + LRF+ +L+++F G+P++I+ R
Sbjct: 387 SQVGIKPPSFVVFVNDPELMHFSYLRFIENTLRQNFGFEGVPLKISTR 434
>gi|264679419|ref|YP_003279326.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
gi|262209932|gb|ACY34030.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
Length = 446
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 240/470 (51%), Gaps = 56/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNRL + R+A+V + +TRD G + G + V+D+ G
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRDAIVADFAG--LTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IV 239
E +A+ G I A T +A+ IF++D R+GL D E+G +LR+ KP I+
Sbjct: 61 EPDASRG-IFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLG---KPTIL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK E + +G +E LG G+ + +SA G G+ L +A L +L
Sbjct: 117 VANKAEGMKDGV-----QLSEFYELGLGEVVPVSAAHGQGVRSLVDA--------ALGLL 163
Query: 300 NDSCTQNNSSTQDVTSPEDD----ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
N + PED+ E + P++LA+ GRPN GKSTL+N L E+R++
Sbjct: 164 N------------LPEPEDEVFGEEDQKPVRLAVAGRPNAGKSTLINTWLGEERLVAFDM 211
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD++ V FE G+ L+DTAG ++ K + SV+++ + + A+VV L++D
Sbjct: 212 PGTTRDAITVPFERNGQKFELIDTAGLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLID 271
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + +E GR +V+ +NK D + Q ++ + + I+T + +
Sbjct: 272 ATQGVTDQDAHIAGYILESGRSVVLGINKWDAVDDYQ--------RQMLERSIETRLSFL 323
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
P+ F SA + +G + +I ++ ++PT L R L + + + K A +P
Sbjct: 324 KFAPLHFISAQKRQGLEPLWKSIIQAHRAATCKMPTPVLTRILMESIQFQTPKKVGAYRP 383
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
K++Y Q PP V + + ++DA RFL +++F+L G P+RI
Sbjct: 384 KMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFLEGRFRKEFNLVGTPLRI 433
>gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972]
gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
gi|422364844|ref|ZP_16445354.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
gi|422377488|ref|ZP_16457727.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972]
gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
Length = 499
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 500
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 233/491 (47%), Gaps = 63/491 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+L + F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAELEEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +F++D R+GL D + K LR KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRD---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK + + + A AE LG I+A G+T L E D +
Sbjct: 114 FLVVNKVDGIDADS-----ACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNA 168
Query: 298 VLNDSCTQNNSSTQDVTSPEDDE----------------SKLPLQLAIVGRPNVGKSTLL 341
L ++ + S +D+TS ED E + P++LAI+GRPNVGKSTL
Sbjct: 169 ELAENGEEQEVSIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLT 228
Query: 342 NALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSR 400
N +L E+RV+V G TRDS+ + E G+ L+DTAG +R+ + SV+Q+
Sbjct: 229 NRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTL 288
Query: 401 KNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVK 450
K + A+VV LV+DA E A+ GR LV+ VNK D L VK
Sbjct: 289 KAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWD--------GLDNEVK 340
Query: 451 EAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKV 510
E V E+ + V + F SAL G G + VI+ YQ R+ TS L R ++
Sbjct: 341 ERVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMA 400
Query: 511 MGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKE 562
H QP K+KY PP V + L + R+L ++
Sbjct: 401 QDDH-------QPPMIRGRRVKLKYAHAGGYNPPIIVVHGNQVNELPGSYKRYLMNYYRK 453
Query: 563 DFDLGGIPIRI 573
++ G PIRI
Sbjct: 454 SLEMMGTPIRI 464
>gi|259907722|ref|YP_002648078.1| GTP-binding protein EngA [Erwinia pyrifoliae Ep1/96]
gi|385785498|ref|YP_005816607.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
gi|387870493|ref|YP_005801863.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
gi|224963344|emb|CAX54829.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96]
gi|283477576|emb|CAY73492.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
gi|310764770|gb|ADP09720.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
Length = 498
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 234/485 (48%), Gaps = 53/485 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R A + + + +FM+D R+GL P D+ + K LR Q
Sbjct: 59 GID--GNEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADVAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + L + A + LG G+ I+A G G+T L E L P +++
Sbjct: 115 IVANKTDGLDADS-----AVVDFWSLGLGEIHPIAASHGRGVTSLLELVLLPWMDEVAPE 169
Query: 294 -----------YMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTL 340
Y + N T + EDD + LP++LAIVGRPNVGKSTL
Sbjct: 170 RELTEEEENEAYWAALAAKEAKANGEETAE----EDDFNPLDLPIKLAIVGRPNVGKSTL 225
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
N +L EDRV+V G TRDS+ + E GR L+DTAG +R K + SV+++
Sbjct: 226 TNRILGEDRVVVFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKT 285
Query: 400 RKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRV 449
K + A+VV LV+DA E + ++ GR LV++VNK D LS + V
Sbjct: 286 LKAIEDANVVMLVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEV 337
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
++ V + + + + + F SAL G G + V + Y R+ TS L R +
Sbjct: 338 RDEVKEALDYRLGFIDFARIHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHM 397
Query: 510 VMGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGG 568
H +S + K+KY PP V + K L D+ R+L + D+ G
Sbjct: 398 AADDHQPPLVRSRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLDIMG 457
Query: 569 IPIRI 573
PIRI
Sbjct: 458 TPIRI 462
>gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627]
gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +E+
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLERVLLPWMEEL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L ED
Sbjct: 176 APQEEVDEDAEYWAQFEAQENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGED 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 464
>gi|423121598|ref|ZP_17109282.1| GTPase Der [Klebsiella oxytoca 10-5246]
gi|376393977|gb|EHT06631.1| GTPase Der [Klebsiella oxytoca 10-5246]
Length = 492
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 234/484 (48%), Gaps = 56/484 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVE--DY 294
+ NK + + A A+ LG GD I+A G G+T L E L P E D
Sbjct: 114 FLVANKTDGIDADQ-----AIADFWSLGLGDIHPIAASHGRGVTSLLEHVLLPWAEEIDP 168
Query: 295 MLRVLNDSCT----QNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQED 348
V D+ + + ++ PEDD LP++LAIVGRPNVGKSTL N +L ED
Sbjct: 169 SEEVDEDAAYWAQFEAEQNGEEAEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGED 228
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAH 407
RV+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+
Sbjct: 229 RVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDAN 288
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + V+E V + +
Sbjct: 289 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVREQVKETL 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + + F SAL G G + V + Y R+ T+ L R + H
Sbjct: 341 DFRLGFIDFARIHFISALHGSGVGNLFESVREAYDSATRRVGTAMLTRIMTMAAEDH--- 397
Query: 518 DQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
QP K+KY PP V + K L D+ R+L ++ D+ G
Sbjct: 398 ----QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGT 453
Query: 570 PIRI 573
PIRI
Sbjct: 454 PIRI 457
>gi|357057998|ref|ZP_09118855.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
gi|355374575|gb|EHG21869.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
Length = 441
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 239/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYMDAEWLNHEFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D R+GL D EVG+ LR+ KP++
Sbjct: 62 EFDE-SDHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVGRLLRRTQ---KPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPI ISA + + +L +A+ +
Sbjct: 118 AVNKIDSFER-----EALIYDFYSLGLGDPIPISASNAMNLGDLLDAVVAAFP------- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ +++ + E + +A+VGRPNVGKS+L+N LL E+RV+V G T
Sbjct: 166 -------KEAEENIDADE-------IAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V++A E
Sbjct: 212 RDAIDTHFTRDGAKYLLIDTAGMRRKGKISLPVERYSVMRSLRAIDRAGVVLMVINAAEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G++++VNK D+ + + + + +++ + + P
Sbjct: 272 ILEQDTKIAGYVHESGKGVIIVVNKWDIFPEKNDKSTLR-----FTDDLREKLGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 327 VLYTSALTGQRVERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQLKILF 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRF+ L+E F G P+R+ R+
Sbjct: 387 VTQVGITPPTFIIFVNDPELMHFSYLRFIENRLRESFGFEGTPLRLVVRA 436
>gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|418325423|ref|ZP_12936629.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU071]
gi|365228025|gb|EHM69210.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis VCU071]
Length = 436
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 245/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAELG 270
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354]
gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTENGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|156932946|ref|YP_001436862.1| GTP-binding protein EngA [Cronobacter sakazakii ATCC BAA-894]
gi|389840017|ref|YP_006342101.1| GTP-binding protein EngA [Cronobacter sakazakii ES15]
gi|417791228|ref|ZP_12438703.1| GTP-binding protein Der [Cronobacter sakazakii E899]
gi|429105675|ref|ZP_19167544.1| GTP-binding protein EngA [Cronobacter malonaticus 681]
gi|429111259|ref|ZP_19173029.1| GTP-binding protein EngA [Cronobacter malonaticus 507]
gi|429116536|ref|ZP_19177454.1| GTP-binding protein EngA [Cronobacter sakazakii 701]
gi|449307266|ref|YP_007439622.1| GTP-binding protein Der [Cronobacter sakazakii SP291]
gi|166198713|sp|A7MGU7.1|DER_ENTS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|156531200|gb|ABU76026.1| hypothetical protein ESA_00749 [Cronobacter sakazakii ATCC BAA-894]
gi|333954671|gb|EGL72498.1| GTP-binding protein Der [Cronobacter sakazakii E899]
gi|387850493|gb|AFJ98590.1| GTP-binding protein EngA [Cronobacter sakazakii ES15]
gi|426292398|emb|CCJ93657.1| GTP-binding protein EngA [Cronobacter malonaticus 681]
gi|426312416|emb|CCJ99142.1| GTP-binding protein EngA [Cronobacter malonaticus 507]
gi|426319665|emb|CCK03567.1| GTP-binding protein EngA [Cronobacter sakazakii 701]
gi|449097299|gb|AGE85333.1| GTP-binding protein Der [Cronobacter sakazakii SP291]
Length = 492
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 235/480 (48%), Gaps = 48/480 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GSEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + L A ++ LG G+ I+A G G+T L E L P ++D
Sbjct: 115 LVANKTDGLDPDQ-----AVSDFYSLGLGEIHPIAASHGRGVTSLLEHVLVPWMDDVDPP 169
Query: 294 --------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
Y + + + +D +P+D LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 EEVDEEAEYWAQFEAEQNGELVEEEEDDFNPQD----LPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + E GR L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVFDMPGTTRDSIYIPMERDGREFVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VKE V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEEVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R ++ H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTALLTRIMKMAEEDH 397
Query: 515 SWKD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 398 QPPMVRGRRVKLKYAHAGGYNPPIVVIHGTQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 457
>gi|420194779|ref|ZP_14700576.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM021]
gi|394263839|gb|EJE08560.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM021]
Length = 436
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 246/477 (51%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA EG + ++Q + ++K R+ +S LN + + + + D+ +
Sbjct: 325 IAFVSAKEGLRLKTLSPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLN 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 382 VFYTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|312134636|ref|YP_004001974.1| ribosome-associated gtpase enga [Caldicellulosiruptor owensensis
OL]
gi|311774687|gb|ADQ04174.1| ribosome-associated GTPase EngA [Caldicellulosiruptor owensensis
OL]
Length = 440
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 234/464 (50%), Gaps = 51/464 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PTV I+GRPNVGKS LFNRLI R A+V +TP +TRD G + + F V+D+ G+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIIGETEWRGITFNVIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + IL + + + IF++D ++GL D EV LR KPIV
Sbjct: 61 EP-YSEDIILKQMRRQAQFAVDMSDVIIFIVDGKTGLTDADREVANMLRASK---KPIVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +++ S E LG DPIA+SAE G G+ ++ +A+ +++ + +
Sbjct: 117 AVNKIDNI-----SQEPMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVNYLDNVGINEI 171
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+S +++AI+G+PN GKS+L+N +L E+RV+V G T
Sbjct: 172 EEST---------------------IKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE++G + L+DTAG ++ K S++++ + + R+ + ++LD E
Sbjct: 211 RDAIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G ++ VNK D + + +A + ++I+ + + P
Sbjct: 271 VSEQDAKIAGYAYEAGKGCIIAVNKWDAVEKDEKTA------DEYKKQIEEKLSFLKFAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIKY 527
V+F SA G ++ ++ Y+ + R+ T +LN L + + D+ Q KI Y
Sbjct: 325 VLFISAKTGFRVKKLLETILYVYENYTRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
TQV +PP F++ K + R++ L++ FD G+PI
Sbjct: 385 MTQVGEKPPKIAIFVNSKDLFHFSYQRYIENYLRKTFDFTGVPI 428
>gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA, partial [Escherichia coli MS 84-1]
gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1]
Length = 492
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736]
gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718]
gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591]
gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9]
gi|418957117|ref|ZP_13509041.1| ribosome-associated GTPase EngA [Escherichia coli J53]
gi|427805692|ref|ZP_18972759.1| putative GTP-binding factor [Escherichia coli chi7122]
gi|427810188|ref|ZP_18977253.1| putative GTP-binding factor [Escherichia coli]
gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli (strain
O157:H7, substrain RIMD 0509952)
gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli
(strain O157:H7, substrain EDL933)
gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933]
gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai]
gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli]
gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli]
gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli]
gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli]
gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736]
gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718]
gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591]
gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9]
gi|384379764|gb|EIE37631.1| ribosome-associated GTPase EngA [Escherichia coli J53]
gi|412963874|emb|CCK47800.1| putative GTP-binding factor [Escherichia coli chi7122]
gi|412970367|emb|CCJ45013.1| putative GTP-binding factor [Escherichia coli]
Length = 503
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
gi|415862459|ref|ZP_11535925.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
gi|419803534|ref|ZP_14328704.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
gi|422351893|ref|ZP_16432698.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
gi|384473446|gb|EIE57487.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|188533178|ref|YP_001906975.1| GTP-binding protein EngA [Erwinia tasmaniensis Et1/99]
gi|238689730|sp|B2VE93.1|DER_ERWT9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|188028220|emb|CAO96078.1| GTP-binding protein [Erwinia tasmaniensis Et1/99]
Length = 499
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 234/485 (48%), Gaps = 52/485 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GNEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + L + A + LG G+ I+A G G+T L E L P +++
Sbjct: 115 LVANKTDGLDADS-----AVVDFWSLGLGEIHPIAASHGRGVTSLLELVLLPWMDEVVPQ 169
Query: 294 -----------YMLRVLNDSCTQNNSSTQDVTSPEDDES--KLPLQLAIVGRPNVGKSTL 340
Y + N +T D EDD + LP++LAIVGRPNVGKSTL
Sbjct: 170 RELTEEEENAAYWAELAAKEAKVNGEATAD---EEDDFNPLDLPIKLAIVGRPNVGKSTL 226
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
N +L EDRV+V G TRDS+ + E GR L+DTAG +R K + SV+++
Sbjct: 227 TNRILGEDRVVVFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKT 286
Query: 400 RKNLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRV 449
+ + A+VV LV+DA E + ++ GR LV++VNK D LS + V
Sbjct: 287 LQAIEDANVVMLVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEV 338
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
++ V + + + + + F SAL G G + V + Y R+ TS L R +
Sbjct: 339 RDEVKEALDYRLGFIDFARIHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHM 398
Query: 510 VMGRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGG 568
H +S + K+KY PP V + K L D+ R+L + D+ G
Sbjct: 399 AADDHQPPLVRSRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRRSLDIMG 458
Query: 569 IPIRI 573
PIRI
Sbjct: 459 TPIRI 463
>gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
Length = 441
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 241/477 (50%), Gaps = 54/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN L + ++V +TP VTRD D F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTP--GVTRDRIYAEVTWLDKTFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E E+ + IL + + IFM DVR GL D +V LR+ KP+V
Sbjct: 62 EPES-NDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSK---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK +S E LG G+P+ ISA + LG+ ++ E + VE +
Sbjct: 118 VVNKVDSFQ----KFMMDTYEFYNLGIGEPVPISAASMLGLGDMLEKV---VEHF----- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D QN D+E ++P ++A+VG+PNVGKS+L+N +L EDRV+V AG T
Sbjct: 166 -DDDAQN-----------DEEDEIP-KIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ YQG+ +DTAG ++ K K S++++ + RA VV +++DA E
Sbjct: 213 RDAIDTKVTYQGKEYTFIDTAGLRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEG 272
Query: 419 R----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A + G+G+V+ VNK D + + + +YK + +E + +P
Sbjct: 273 VTEQDAKIAGIAHDRGKGVVIAVNKWDAIE-KNDKTIYKFTNKV--RETLSYMPYA---E 326
Query: 469 VVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMG-RHSWKDQSAQPKIK 526
++F SA G+ RI + + ID + LR+ T LN + + + D+ + KI
Sbjct: 327 IMFISAHTGQ-RIPNLFETIDMVLENQTLRIQTGVLNEIITEATALQQPPSDKGKRLKIF 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
Y TQV +PPTFV F++ K+ + + +R+L ++E F G ++ R RK G
Sbjct: 386 YTTQVSVKPPTFVIFVNDKELMHFSYVRYLENKIREAFGFKGTSLKFIIRE--RKEG 440
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P + ++G+PNVGKS+L N+++ +V N TRD + + +D+AG
Sbjct: 177 IPKIAVVGKPNVGKSSLINKILGEDRVIVSNIA--GTTRDAIDTKVTYQGKEYTFIDTAG 234
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + L+R + + T + + + MID G+ D ++ + +
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHDRGKGV--V 292
Query: 239 VAMNKCESLHNGTGSL---AGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
+A+NK +++ ++ E+L + + + + ISA TG + L+E + +E+
Sbjct: 293 IAVNKWDAIEKNDKTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPNLFETIDMVLENQ 352
Query: 295 MLR----VLNDSCTQNNSSTQDVTSPEDDESKLPL 325
LR VLN+ T+ + Q P D +L +
Sbjct: 353 TLRIQTGVLNEIITEATALQQ---PPSDKGKRLKI 384
>gi|311068799|ref|YP_003973722.1| GTP-binding protein EngA [Bacillus atrophaeus 1942]
gi|419820559|ref|ZP_14344169.1| GTP-binding protein Der [Bacillus atrophaeus C89]
gi|310869316|gb|ADP32791.1| GTP-binding protein EngA [Bacillus atrophaeus 1942]
gi|388475375|gb|EIM12088.1| GTP-binding protein Der [Bacillus atrophaeus C89]
Length = 436
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 232/470 (49%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNYDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ R A + + IFM++ R G+ D EV K L + KP+V
Sbjct: 62 DIGDEPFMTQIRQQAEIA--MDEADVIIFMVNGREGVTAADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L +A ++
Sbjct: 117 AVNKLDNTE-----MRANVYDFYSLGFGEPYPISGTHGLGLGDLLDAAAEHFKNI----- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
PE ++ +Q ++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 167 ----------------PETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y + +VDTAG ++ K + SV+++ K + R+ VVA+VLD EE
Sbjct: 211 RDAVDTMFSYNQQDFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK D + + R + Q I+ + P
Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDE------RTMKEFEQNIRDHFQFLDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
++F SAL + +M +I + LR+ T+ LN + + + + Q KI Y
Sbjct: 325 ILFMSALTTKRIHTLMPAIIKASENHSLRVQTNVLNDIIMDAVAMNPTPTHNGQRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PP+FV F++ + + + RFL +++ FD G PI+I R+
Sbjct: 385 ATQVAVKPPSFVVFVNDPELMHFSYERFLENRIRDAFDFEGTPIKIFARA 434
>gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 441
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 241/477 (50%), Gaps = 54/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN L + ++V +TP VTRD D F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTP--GVTRDRIYAEVTWLDKTFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E E+ + IL + + IFM DVR GL D +V LR+ KP+V
Sbjct: 62 EPES-NDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSK---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK +S E LG G+P+ ISA + LG+ ++ E + VE +
Sbjct: 118 VVNKVDSFQ----KFMMDTYEFYNLGIGEPVPISAASMLGLGDMLEKV---VEHF----- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D QN D+E ++P ++A+VG+PNVGKS+L+N +L EDRV+V AG T
Sbjct: 166 -DDDAQN-----------DEEDEIP-KIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEEV 418
RD++ YQG+ +DTAG ++ K K S++++ + RA VV +++DA E
Sbjct: 213 RDAIDTKVTYQGKEYTFIDTAGLRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEG 272
Query: 419 R----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A + G+G+V+ VNK D + + + +YK + +E + +P
Sbjct: 273 VTEQDAKIAGIAHDRGKGVVIAVNKWDAIE-KNDKTIYKFTNKV--RETLSYMPYA---E 326
Query: 469 VVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMG-RHSWKDQSAQPKIK 526
++F SA G+ RI + + ID + LR+ T LN + + + D+ + KI
Sbjct: 327 IMFISAHTGQ-RIPKLFETIDMVLENQTLRIQTGVLNEIITEATALQQPPSDKGKRLKIF 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCG 583
Y TQV +PPTFV F++ K+ + + +R+L ++E F G ++ R RK G
Sbjct: 386 YTTQVSVKPPTFVIFVNDKELMHFSYVRYLENKIREAFGFKGTSLKFIIRE--RKEG 440
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P + ++G+PNVGKS+L N+++ +V N TRD + + +D+AG
Sbjct: 177 IPKIAVVGKPNVGKSSLINKILGEDRVIVSNIA--GTTRDAIDTKVTYQGKEYTFIDTAG 234
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + L+R + + T + + + MID G+ D ++ + +
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHDRGKGV--V 292
Query: 239 VAMNKCESLHNGTGSL---AGAAAESL-MLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
+A+NK +++ ++ E+L + + + + ISA TG + +L+E + +E+
Sbjct: 293 IAVNKWDAIEKNDKTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPKLFETIDMVLENQ 352
Query: 295 MLR----VLNDSCTQNNSSTQDVTSPEDDESKLPL 325
LR VLN+ T+ + Q P D +L +
Sbjct: 353 TLRIQTGVLNEIITEATALQQ---PPSDKGKRLKI 384
>gi|310659189|ref|YP_003936910.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
gi|308825967|emb|CBH22005.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
Length = 438
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 242/476 (50%), Gaps = 55/476 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNR+ R A+V +TP VTRD A+ F ++D+ G+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRIAGERIAIVEDTP--GVTRDRIYAQAEWVSKHFTIIDTGGI 60
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + S ++ + A + + Q +F++D ++GL P D +V L K KP++
Sbjct: 61 EPD--SEELIPKKMRQQAELAMDMAQVILFVVDGKAGLTPSDRDVALMLLKTK---KPVL 115
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK ++ +L + LGFG+PI +S+ GLG +L
Sbjct: 116 LVVNKVDN-----KNLPDDFYDFYELGFGEPIPVSSSIGLGTGDLL-------------- 156
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
D +N D ED +++AIVG+PN GKS++LN L+ E+RV+V P AG
Sbjct: 157 --DEVVKNFPQDMDTELDED-----VVKVAIVGKPNAGKSSILNRLIGEERVIVSPIAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + E G+ +DTAG ++ K + SV+++ ++ +A VV V+DA E
Sbjct: 210 TRDAIDTYIEMDGKKYLFIDTAGIRRKSKVYENIEKYSVIRAYASVEKADVVLTVIDATE 269
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A + G+ +V+VNK DL+ +S VKE ++I+ +P +
Sbjct: 270 GISEQDSKIAGLAHDAGKASIVVVNKWDLIEKDNHS-----VKEYT-KKIREELPFMQYC 323
Query: 468 PVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKI 525
P++F SAL + R+ + + +D + + R+ T LN + VM D+ + KI
Sbjct: 324 PILFVSALTSQ-RMGKIKETVDFIFDEASKRVATGVLNDVIGEAVMMNQPPSDKGKRLKI 382
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Y TQV RPPTF F++ K+ + R++ L+E+F G P++I R RK
Sbjct: 383 YYATQVGVRPPTFAIFVNEKELFHFSYQRYIENKLRENFGYEGTPLKIYVREKNRK 438
>gi|381393552|ref|ZP_09919273.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330768|dbj|GAB54406.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 481
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 238/476 (50%), Gaps = 44/476 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL R+ALV + P +TRD + G A +F V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTNTRDALVADFPG--LTRDRKYGTATFELRQFIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ I R A + + + +F++D R GL P D+ + + LRK Q KP+
Sbjct: 59 GIS--GNEQGIDARMAHQSLLAIEEADVVLFLVDARDGLTPTDIGISEHLRK---QEKPV 113
Query: 239 -VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ +NK + L + S A+ LG G + I+A G G+++L EA+ ++ +
Sbjct: 114 HIVVNKVDGLDGDSES-----ADFYTLGMGSLLQIAAAHGRGVSKLIEAVLSPLD----K 164
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKL---PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ D S ++ ++ +L P++LAIVG+PNVGKSTL N +L E+RV+V
Sbjct: 165 IFKDMHVAPPSIEEETIDAQEKLKQLQAQPIKLAIVGKPNVGKSTLTNRILGEERVVVYD 224
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVL 413
G TRDS+ + + GR L+DTAG +R+K S++++ + + A+VV LV+
Sbjct: 225 LPGTTRDSIFIPMQRDGREYVLIDTAGVRKRKKVSDVVEKFSIVKTLQAIEEANVVLLVV 284
Query: 414 DAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E A ++ GR LV+ VNK D L VK+ V +E+ +
Sbjct: 285 DAREGVAEQDLSLLGFILNSGRSLVIAVNKWD--------GLDNHVKDQVKKELDRRLGF 336
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD---QS 520
V + F SAL G G + V + Y+ R+ TS L + M +H + +
Sbjct: 337 VDFARLHFISALHGSGVGHLFESVQEAYESATKRINTSMLTDIME--MAQHDHQPPLVRG 394
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K+KY PP V + K L DA RFLT + + G PI+I R
Sbjct: 395 RRVKMKYAHAGGYNPPVIVIHGNQVKDLPDAYKRFLTNYYRRSLSMMGTPIKIEFR 450
>gi|75909106|ref|YP_323402.1| GTP-binding protein EngA [Anabaena variabilis ATCC 29413]
gi|123609166|sp|Q3M929.1|DER_ANAVT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|75702831|gb|ABA22507.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 453
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 236/476 (49%), Gaps = 60/476 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYLPAYWSDREFQVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L + AIF+++ ++G + D E+ +WLR+ +
Sbjct: 61 LVFNDDTEFLPLIRQQALAA--LHEASAAIFVVNGQTGPNSADEEIAEWLRQQP--VPVF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLG----MTELYEALRPSVEDY 294
+A+NKCES G+ A+E LG G+P ISA G G + EL + L P+ E
Sbjct: 117 LAVNKCESPDQGSIQ----ASEFWELGLGEPYPISAIHGNGTGELLDELIKHLPPTTE-- 170
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+NN +++AI+GRPNVGKS+LLNA E+RV+V P
Sbjct: 171 --------LEENNE----------------IKIAIIGRPNVGKSSLLNAFAGEERVIVSP 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
+G TRD++ E G+ L+DTAG +++ + G S+ ++ K + RA VV LV+
Sbjct: 207 ISGTTRDAIDTFIERNGQNYRLIDTAGIRKKKSIDYGTEFFSINRAFKAIRRADVVLLVI 266
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA + R ++EG+ VV+VNK D + + + +Y K ++ +
Sbjct: 267 DALDGVTEQDQKLAGRILDEGKACVVVVNKWDAVE-KDSYTIYDYEK-----NLEARLHF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-- 521
++ SA+ G+ ++ V ++ R+ TS +N L + HS
Sbjct: 321 TEWADTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVSWHSPPTSRGGR 380
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Q +I Y TQV +PPT F++ K +D R++ + ++ G PIR+ RS
Sbjct: 381 QGRIYYGTQVSTQPPTIALFVNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRS 436
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 113 TKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRF 172
T+++ N + IIGRPNVGKS+L N +V +P TRD + + +
Sbjct: 169 TELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIV--SPISGTTRDAIDTFIERNGQNY 226
Query: 173 KVLDSAGLETEATSGSILDRTAGMTAN----VLAKTQFAIFMIDVRSGLHPLDLEVGKWL 228
+++D+AG+ + SI T + N + + + +ID G+ D ++ +
Sbjct: 227 RLIDTAGIRKKK---SIDYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRI 283
Query: 229 RKHAPQIKPIVAMNKCESLHNGTGSL----AGAAAESLMLGFGDPIAISAETGLGMTELY 284
+V +NK +++ + ++ A + D I +SA TG + ++
Sbjct: 284 LDEGKAC--VVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIYVSAVTGQRVEKIL 341
Query: 285 EALRPSVEDYMLRV 298
E + + E++ RV
Sbjct: 342 ELVTKANEEHKRRV 355
>gi|303232074|ref|ZP_07318777.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
gi|302513180|gb|EFL55219.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
Length = 444
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 248/477 (51%), Gaps = 55/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ + E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQESN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V D+E + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DEEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + + L+DTAG ++ K ++ S+++S +++ R+ +V LVLD
Sbjct: 213 TRDSIDTHWTHGDQKFVLIDTAGMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVD 272
Query: 416 ---EEVR-----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + A E G+G++++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVIIVVNKWDLVEKDDKTTL--RYTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R+
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLILRGKKRE 441
>gi|383189018|ref|YP_005199146.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587276|gb|AEX51006.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 494
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 234/486 (48%), Gaps = 58/486 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL + R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPG--LTRDRKYGRAEIEGNEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+GL P D + + LR +
Sbjct: 59 GID--GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR--EKATF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSV 291
+ NK + L + A + LG GD AI+A G G+T+L E + +P
Sbjct: 115 LVANKTDGLDPDS-----ATGDFYSLGLGDVYAIAASHGRGVTQLIEHVLIPFIGEKPEE 169
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESK-----LPLQLAIVGRPNVGKSTLLNALLQ 346
+ N + +T D PED+E LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 VELTEEEANAAYWAEQEATGDEI-PEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILG 228
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
E+RV+V G TRDS+ + R L+DTAG +R K + SV+++ + +
Sbjct: 229 EERVVVYDMPGTTRDSIYIPMNRDDREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIED 288
Query: 406 AHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV LV+DA E + ++ GR LV++VNK D +S + + V
Sbjct: 289 ANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMS--------EEARAQVKD 340
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
++ + V + F SAL G G + V + Y R+ TS L R ++ H
Sbjct: 341 QLDLRLGFVDFARIHFISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDH- 399
Query: 516 WKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
QP K+KY PP V + K L+D+ R+L + +
Sbjct: 400 ------QPPLVNGRRVKLKYAHAGGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVM 453
Query: 568 GIPIRI 573
G PIRI
Sbjct: 454 GTPIRI 459
>gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116]
gi|166225933|sp|A7MZE5.1|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116]
Length = 498
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 241/490 (49%), Gaps = 61/490 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVT------SPEDDESKL------PLQLAIVGRPNVGKSTLLNA 343
D ++ + +D + ED E++ P++LAI+GRPNVGKSTL N
Sbjct: 169 ASESEDGEIEDLTEFEDEELAVEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGKSTLTNR 228
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKN 402
+L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV+++ K
Sbjct: 229 ILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKA 288
Query: 403 LMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E A+ GR +V+ VNK D L VKE
Sbjct: 289 VEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDNEVKEN 340
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V +E+ + V + F SAL G G + + + Y+ R+ TS L R ++
Sbjct: 341 VKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATD 400
Query: 513 RHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDF 564
H QP K+KY PP V + + L D+ R+L ++
Sbjct: 401 DH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMNYFRKSL 453
Query: 565 DLGGIPIRIT 574
++ G PIRI
Sbjct: 454 EIMGTPIRIN 463
>gi|311278558|ref|YP_003940789.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1]
gi|308747753|gb|ADO47505.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1]
Length = 492
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 234/487 (48%), Gaps = 62/487 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +FM+D R+GL P D + K LR A +
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLR--AREKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + + A ++ LG G+ I+A G G+T L E L P +ED
Sbjct: 115 LVANKTDGIDPDQ-----AVSDFWSLGLGEIYPIAASHGRGVTSLLEHVLLPWMEDVDPA 169
Query: 294 --------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
Y + D + +D +P+D LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 EEVDEDAEYWAQFEADENGEEAEEPEDDFNPQD----LPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + E R L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VKE V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMNMAAEDH 397
Query: 515 SWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
QP K+KY PP V + K L D+ R+L ++ D+
Sbjct: 398 -------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDV 450
Query: 567 GGIPIRI 573
G PIRI
Sbjct: 451 MGTPIRI 457
>gi|253689379|ref|YP_003018569.1| small GTP-binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259645883|sp|C6DBH0.1|DER_PECCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|251755957|gb|ACT14033.1| small GTP-binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 495
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 238/483 (49%), Gaps = 51/483 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGHEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+GL P D + K LR + +
Sbjct: 59 GID--GTEDGVETRMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR--EKTTV 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA-LRPSVEDYMLR 297
+ NK + L A+ LG G+ I+A G G+T L E L P V+D +
Sbjct: 115 LVANKTDGLDPDM-----VTADFYSLGMGEVYPIAASHGRGVTSLLETVLLPFVQDEIEE 169
Query: 298 VLNDSCTQNNSS---------------TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
+ S + N++ +D +PED LP++LAIVGRPNVGKSTL N
Sbjct: 170 PVELSEEEENAAYWAALEADEQASEEEAEDDFNPED----LPIKLAIVGRPNVGKSTLTN 225
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + R L+DTAG +R K + SV+++ +
Sbjct: 226 RILGEERVVVFDMPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQ 285
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + V+E
Sbjct: 286 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVRE 337
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + + F SAL G G + V + Y R+ T+ L R ++
Sbjct: 338 QVKETLDLRLGFIDFARIHFISALHGSGVGNLFESVTEAYACATRRVSTAMLTRIMQMAS 397
Query: 512 GRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
H + + K+KY PP V + K L D+ R+L + D+ G P
Sbjct: 398 DDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVMGTP 457
Query: 571 IRI 573
IRI
Sbjct: 458 IRI 460
>gi|421074409|ref|ZP_15535441.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
gi|392527450|gb|EIW50544.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
Length = 440
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 248/469 (52%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS LFN + ++R ++V N P VTRD A+ D F ++D+ G+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIP--GVTRDRIYLDAEWLDREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E +S +L + + +F++D + GL D EV LR + IVA
Sbjct: 62 EIE-SSDKMLTAMRYQAKLAIDEADAILFIVDGKVGLTSADEEVAIILRNTRKPV--IVA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK +++ A E LG GDPIAISA L + +L +++ + R+ N
Sbjct: 119 VNKVDNMQK-----ANEIYEFYNLGLGDPIAISAANALNIGDL-------LDEVVKRLPN 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + ED+E+ +++A++GRPNVGKS+L+N L+ E+RV+V AG TR
Sbjct: 167 DEVVE-----------EDNET---IKVAVIGRPNVGKSSLVNRLVGEERVIVSDVAGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA---- 415
D++ HF + L+DTAG ++ K + P SVM++ + + R+ VV +V+DA
Sbjct: 213 DAIDTHFTKDDTSFVLIDTAGMRRKAKVELPVERYSVMRALRAVDRSDVVLIVIDAVDGV 272
Query: 416 -EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
E+ + + + G+ V+IVNK DLL ++L + I+T + + PV
Sbjct: 273 TEQDKKIAGYAHDAGKASVIIVNKWDLLEKDGKTSL------RYTENIRTELAFMQYSPV 326
Query: 470 VFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+F SAL + R++ + ++I ++ +R+ TS LN+ + + + Q + KI +
Sbjct: 327 LFISALTNQ-RVSRVTELIKFVAEQHTMRIATSVLNQVIEDAVSINPPPSQFGRRLKIYF 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ +PPTFV F++ + + + LRFL L+E F G P+++ R
Sbjct: 386 TTQPNVKPPTFVLFVNEPEIMHFSYLRFLENRLRESFGFEGTPLKLVVR 434
>gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl]
gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl]
gi|189037140|sp|A9WHH9.1|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783145|sp|B9LBT6.1|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
Length = 449
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 235/480 (48%), Gaps = 56/480 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS FNRLI R A+V + P TRD G F V+D+AG+
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPG--TTRDRLYGDTFWNGREFTVVDTAGV 61
Query: 181 -----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
+ I RT + +A+ IF++D R GL D +V LR +
Sbjct: 62 LFGGEDPNLPEAEIARRTRAQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTS--- 118
Query: 236 KPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KP+V A+NKC+S A E L G+PI +SA GLG ++ + L +Y
Sbjct: 119 KPVVLAVNKCDSQERMLD-----AVEFYALNLGEPIPMSAFHGLGTGDVLDRL----TEY 169
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + TQ E + L++AIVGRPNVGKS+LLN LL ++R +V
Sbjct: 170 L---------PPKTFTQ--------EEERHLRIAIVGRPNVGKSSLLNRLLGQERSVVSS 212
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD + Y G + L+DTAG + K E+G SV+++ + + R V L++
Sbjct: 213 IPGTTRDPIDTTITYHGEPITLIDTAGIRRAGKIERGIEKYSVLRTLRAIERCDVALLLI 272
Query: 414 DAEE-VRA---------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E V A VE +GL+++VNK D + ++S Y A +++
Sbjct: 273 DATEGVTAQDTHIAGMVVEAKKGLILVVNKWDAIE--KDSHTYY----AFQDQVREAFKF 326
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSA 521
V P+VF SAL G+ ++ + Y + R+PTS LN +LR+VM + + A
Sbjct: 327 VDYAPIVFVSALTGQRVSHLLDYAREVYVQRQKRVPTSELNNFLREVMLQQPPMAVKKGA 386
Query: 522 QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y Q + PP F+ F + + + + R+L L+E + G PI I RS RK
Sbjct: 387 HLRLYYAVQPQTEPPVFLFFANDGELVHWSYARYLENRLRERYGFQGTPIVIVFRSRERK 446
>gi|381206837|ref|ZP_09913908.1| GTP-binding protein Der [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 456
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 243/483 (50%), Gaps = 54/483 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
L V I+GRPNVGKS FNRL+ R A+V + P VTRD GLA RF +D+ G
Sbjct: 5 LAVVAIVGRPNVGKSTFFNRLVGRHTAIVEDIPG--VTRDRNYGLASFRGFRFLAIDTGG 62
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI- 238
E + +G +L + + + IF+ ++ GL+P D E+ ++L +H KPI
Sbjct: 63 FEPISENG-LLQQMRQQAQVAVEEADAVIFLTSIQDGLNPGDEEIYRYLSRHK---KPIF 118
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE-DYMLR 297
VA NK + + T AE LG +SA G+ L EA+ V DY
Sbjct: 119 VAANKTDHPSHDT-----QIAEFYQLGVEHVYGVSAAHTRGLEALLEAVHEQVPLDYT-- 171
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
D E+ +++A++G+PN GKS+L+NALL E+R++V +AG
Sbjct: 172 --------------------DLEAGTQVRVAVIGKPNAGKSSLINALLGEERMVVDSQAG 211
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD V ++G+ LVDTAG ++ + + + S++ + K + R+ +V L++DA
Sbjct: 212 TTRDPVDSLCRHEGKEYLLVDTAGIRRKGRVTQKIETYSIVSALKTMERSDIVLLIIDAT 271
Query: 417 E------VR----AVEEGRGLVVIVNKMDL-------LSGRQNSALYKRVKEAVPQEIQT 459
E +R A++ + +V++VNK DL L +R+++A+ E++
Sbjct: 272 EGVTEQVLRIGGYALDRKKAIVLVVNKWDLAVQGEIALRSVPRQLEPQRLQDAMTTELRE 331
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + P+VF SA G+ + ++ + Y+++ R+ T+ LN L ++ +HS +
Sbjct: 332 RLEFLGFAPLVFVSAKTGKRITQIFQKIDEVYEQYMRRVSTADLNTVLEMIVRKHSPPAK 391
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV 578
S + KI Y TQV A PPTFV + + L+ + R+ L+ F G P+ + R
Sbjct: 392 SGRATKIFYGTQVSASPPTFVMVSNHPEKLNYSYERYFLNQLRYHFGFEGTPLHLIWRGR 451
Query: 579 PRK 581
RK
Sbjct: 452 ERK 454
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 109 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 168
P+D+T ++ V +IG+PN GKS+L N L+ +V + TRD + L +
Sbjct: 167 PLDYTDLEAGTQVRVAVIGKPNAGKSSLINALLGEERMVVDSQAG--TTRDPVDSLCRHE 224
Query: 169 DLRFKVLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLDLEVGKW 227
+ ++D+AG+ + ++ + ++A + ++ + +ID G+ L +G +
Sbjct: 225 GKEYLLVDTAGIRRKGRVTQKIETYSIVSALKTMERSDIVLLIIDATEGVTEQVLRIGGY 284
Query: 228 LRKHAPQIKPIVAMNKCESLHNGTGS------------LAGAAAESL-----MLGFGDPI 270
I ++ +NK + G + L A L LGF +
Sbjct: 285 ALDRKKAI--VLVVNKWDLAVQGEIALRSVPRQLEPQRLQDAMTTELRERLEFLGFAPLV 342
Query: 271 AISAETGLGMTELYEALRPSVEDYMLRV 298
+SA+TG +T++++ + E YM RV
Sbjct: 343 FVSAKTGKRITQIFQKIDEVYEQYMRRV 370
>gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
Length = 503
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSQLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|440286602|ref|YP_007339367.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
strain FGI 57]
gi|440046124|gb|AGB77182.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
strain FGI 57]
Length = 492
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 236/480 (49%), Gaps = 48/480 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADKAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM- 295
+ NK + + A A+ LG GD I+A G G+T L E L P V+D
Sbjct: 114 FLVANKTDGVDADQ-----AIADFWSLGLGDIYPIAASHGRGVTSLLEHVLLPFVDDVNP 168
Query: 296 -LRVLNDS-------CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALL 345
V D+ QN ++ PEDD + LP++LAIVGRPNVGKSTL N +L
Sbjct: 169 PEEVDEDAEYWAKFEAEQNGEPLEE---PEDDFDPTTLPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + + R L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS V+E V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------NEVREQVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R + + H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTAMLTRIMTMAVEDH 397
Query: 515 SWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 398 QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 457
>gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
Length = 499
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QDVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|303284441|ref|XP_003061511.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456841|gb|EEH54141.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 470
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 241/491 (49%), Gaps = 65/491 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKSALFNRL + A+VY+ P +TRD A GD F ++D+ G
Sbjct: 3 LPRVAIVGRPNVGKSALFNRLTGTKRAIVYDQP--GITRDRMYVRAFWGDSEFMMVDTGG 60
Query: 180 LET---EATSGSILDRTAGM--------TANVLAKTQFA--IFMIDVRSGLHPLDLEVGK 226
LE+ + +D G + LA + A + ++D ++GL D+++ +
Sbjct: 61 LESLPGNPGAAPSVDAVGGFEILPGMIESQAALAVREAASLVMVVDGQTGLTTADVDIYR 120
Query: 227 WLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA 286
W+RK+ ++A+NKCES G + + LG P+A+SA +G G ++ +
Sbjct: 121 WIRKNHADKPLVLAVNKCESTTRGEEQVL----DFWSLGGVTPLAVSAISGTGTGDMMDQ 176
Query: 287 LRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQ 346
L C + D +E PL++AIVGRPNVGKS+LLN L
Sbjct: 177 L---------------CATLPAVNADDEKESGEEVAEPLKVAIVGRPNVGKSSLLNQLSG 221
Query: 347 EDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAGWLQRE-----KEKGPASLSVMQSR 400
+ R +V +G TRD++ + G L+DTAG +R K+K P LSV ++
Sbjct: 222 DARAIVSDHSGTTRDTIDSDVTDADGNKFTLIDTAGIRRRTAVAAGKDK-PEELSVGRAL 280
Query: 401 KNLMRAHVVALVLDAE-----------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRV 449
+ + RA VV LV+DAE E A+ EG LV+ VNK D++ +NS
Sbjct: 281 QAMRRAEVVVLVIDAEEGPSQQDFVLAERAALTEGCALVLCVNKWDVID--KNSYSMNEY 338
Query: 450 KEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK 509
+++ +++ VV+ SAL G+ V+ ++ RL T+ LN +++
Sbjct: 339 TKSLRSKLRV----FEWASVVYVSALTGQRVQKVLAAAVEASTHHRKRLSTATLNAVVQE 394
Query: 510 VMGRHSWKDQSA----QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFD 565
WK + + K+ Y TQ RPPTFV F + K + R++ +SL+E+
Sbjct: 395 AT---LWKSPPSRGGRKGKVYYVTQASTRPPTFVFFCNDPKLFVETYRRYMERSLRENIG 451
Query: 566 LGGIPIRITQR 576
G P+RI R
Sbjct: 452 FPGTPVRILWR 462
>gi|428201101|ref|YP_007079690.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
gi|427978533|gb|AFY76133.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
Length = 452
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 241/473 (50%), Gaps = 56/473 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL ++A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEP--GITRDRTYRPAFWRDREFQVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ E T L R M A LA+ AIF++D +SG D E+ WLR+ + + +
Sbjct: 61 IVFDEDTEFLPLIREQAMLA--LAEASAAIFVVDGQSGPTTGDREIADWLRQQS--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES+ G AAE LG G+P ISA G G EL
Sbjct: 117 LAVNKCESVEQGLVQ----AAEFWELGLGEPYPISAIHGNGTGEL--------------- 157
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D +++ PE +++AI+GRPNVGKS+LLNAL E R +V P +G
Sbjct: 158 LDDLIAYLPPTSELPEVPE-------IKVAIIGRPNVGKSSLLNALTGEKRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ E +G+ L+DTAG ++R+K + G + ++ K + R+ VV V+D
Sbjct: 211 TRDAIDTVIERKGKNYRLIDTAG-IRRKKNVDYGAEFFGINRAFKAIRRSDVVLFVIDVL 269
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +++G+ V++VNK D + + + +Y K IQ + +
Sbjct: 270 DGVTDQDLKLAGRIIDDGKAAVIVVNKWDAVE-KDSYTIYDYQK-----LIQDRLYFMDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDT-YQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
+F SA+ G+ R+ + +IDT ++ R+ T+ +N L++ M HS Q Q
Sbjct: 324 AEKIFVSAMTGQ-RVNKILDLIDTAAEEHGRRVSTAVINEVLQEAMSWHSPPATRQGKQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I Y TQV +PPT F++ +D R++ ++ G PIR+ R
Sbjct: 383 RIYYGTQVSTKPPTIALFVNDPDRFNDNYRRYIEGQFRQQLGFTGTPIRLLWR 435
>gi|365850686|ref|ZP_09391148.1| ribosome biogenesis GTPase Der [Yokenella regensburgei ATCC 43003]
gi|364566887|gb|EHM44565.1| ribosome biogenesis GTPase Der [Yokenella regensburgei ATCC 43003]
Length = 505
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 233/490 (47%), Gaps = 64/490 (13%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 FNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA-LRPSVED- 293
P + NK + + A A+ LG G+ I+A G G+T L E L P V++
Sbjct: 125 PTFLVANKTDGIDADQ-----AVADFWSLGLGEIYPIAASHGRGVTSLLETVLLPWVDEV 179
Query: 294 -----------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
Y + + + +D +P+D LP++LAIVGRPNVGKSTL N
Sbjct: 180 NPPEEVDEDAEYWAQFEAEQNGEEVEEPEDTFNPQD----LPIKLAIVGRPNVGKSTLTN 235
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRK 401
+L E+RV+V G TRDS+ + E R L+DTAG +R K SV+++ +
Sbjct: 236 RILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDTVEKFSVIKTLQ 295
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS V+E
Sbjct: 296 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------NEVRE 347
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + V F SAL G G + V + Y R T+ L R +
Sbjct: 348 QVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRQSTAMLTRIMNMAA 407
Query: 512 GRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKED 563
H QP K+KY PP V + K L D+ R+L ++
Sbjct: 408 DDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKS 460
Query: 564 FDLGGIPIRI 573
D+ G PIRI
Sbjct: 461 LDVMGTPIRI 470
>gi|345886938|ref|ZP_08838153.1| GTP-binding protein engA [Bilophila sp. 4_1_30]
gi|345037823|gb|EGW42330.1| GTP-binding protein engA [Bilophila sp. 4_1_30]
Length = 452
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 251/489 (51%), Gaps = 66/489 (13%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLR-FKVLDS 177
+LP + ++GRPNVGKS LFNRLIR A+ ++ P VTRD EG+ + R F ++D+
Sbjct: 1 MLPKIALLGRPNVGKSTLFNRLIRSNRAITHDRPG--VTRDRMEGVVRSRSGRSFTLIDT 58
Query: 178 AGLETEATSGSILDRTAGM---TANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKW 227
G+ T + S+ D G+ A +L +TQ A+ ++D R GL P D + +
Sbjct: 59 GGV-TLDSHHSVADGPEGLRGFEAEILQQTQAAMDEASVFCLVVDGRDGLMPFDEHLASF 117
Query: 228 LRKHAPQIKP-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA 286
+R+ KP ++ +NK + + + LA E LGF +A+SAE G + L
Sbjct: 118 VRRAG---KPTLLVVNKVDGMEHEDTMLA----EFHALGF-PMLALSAEHGHNIRAL--- 166
Query: 287 LRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQ 346
E+ M+ +L + ++V L+LA++GRPN GKS+L+NA++
Sbjct: 167 -----EEEMVDLLPVEDPDAEAKPENV-----------LRLAMLGRPNAGKSSLVNAMIG 210
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMR 405
EDR++V AG TRDSV + F GR VDTAG +R + SV S K +
Sbjct: 211 EDRMIVSDVAGTTRDSVDIPFVSDGRACEFVDTAGVRRRTRITDTVERFSVNSSLKTTTK 270
Query: 406 AHVVALVLDAEEVRAVEEGR----------GLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A V V+DA E ++ R +++VNK+DL+ ++ +AL K KE
Sbjct: 271 ADVTLYVIDALEGVTAQDKRLIDLLDERKTPFMILVNKIDLVGRKEQAALEKSFKE---- 326
Query: 456 EIQTVIPQVTGIPVVFTSALE--GRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
V+ +PV+ SA++ G GRI + I ++ R+ T LNR + +V+ +
Sbjct: 327 ----VLQFCPHVPVLMVSAMKQVGLGRIVPLAAQI--REECNTRIGTGALNRAMEEVLTK 380
Query: 514 HSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H + ++PK Y TQ + PPTFV F+S +S+ R+L +SL++ F + PIR
Sbjct: 381 HQPPVVKRSRPKFFYLTQAEVAPPTFVFFVSDADRVSETYARYLDRSLRKIFRIEHAPIR 440
Query: 573 ITQRSVPRK 581
+ RS +K
Sbjct: 441 VRLRSSHKK 449
>gi|428319778|ref|YP_007117660.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
gi|428243458|gb|AFZ09244.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
Length = 453
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 238/474 (50%), Gaps = 59/474 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL ++A+V++ P +TRD A GD ++V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLANTQDAIVHDEPG--ITRDRTYRPAYWGDREYQVVDTGG 60
Query: 180 L----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
L ETE L LA+ AIF++D ++GL D + WLR ++
Sbjct: 61 LVFDDETE-----FLPLIREQAMAALAEASAAIFVVDGQTGLTGGDEAIASWLRLQ--KV 113
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
I+A+NKCES G AA+ LG G+P IS G G EL + L + +
Sbjct: 114 PVILAVNKCESEKTGLTQ----AADFWQLGLGEPYPISGIHGNGTGELLDKLITYLPTEV 169
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
L + + +++AI+GRPNVGKS+LLNA L E+R +V P
Sbjct: 170 LSEVEE-----------------------IKVAIIGRPNVGKSSLLNAFLGENRAIVSPI 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ E G+T L+DTAG +++ E G + ++ K + RA+V+ LV+D
Sbjct: 207 SGTTRDAIDTLVERNGKTYRLIDTAGIRKKKNVEYGAEFFGINRAFKAIRRANVILLVID 266
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A + R +EGR +++VNK D + + + +Y+ +E++T + +
Sbjct: 267 AIDGVTDQDQKLADRISQEGRACIIVVNKWDAVE-KDSDTIYE-----YEREVRTRLYFL 320
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW--KDQSAQ 522
++F SA+ G+ ++ V + R+PT+ +N + + HS Q Q
Sbjct: 321 DWAEMIFVSAMSGQRVEKIIELVDKASDEHKRRVPTAVINEVIEEATTWHSAPVTRQGKQ 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV+++PPT F++ K ++ R++ ++ G P+R+ R
Sbjct: 381 GKIYYGTQVRSQPPTIALFVNDPKRFTENYRRYMESQFRKHLGFTGTPMRLLWR 434
>gi|455641370|gb|EMF20541.1| GTP-binding protein Der [Citrobacter freundii GTC 09479]
Length = 490
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 230/474 (48%), Gaps = 38/474 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADAAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L A + LG G+ I+A G G+ L E L P ++D +
Sbjct: 115 LVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQ 169
Query: 298 VLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D Q + PEDD LP++LAIVGRPNVGKSTL N +L EDRV+
Sbjct: 170 EEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 229
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
V G TRDS+ + + R L+DTAG +R K + SV+++ + + A+VV
Sbjct: 230 VYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVM 289
Query: 411 LVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+DA E + ++ GR LV++VNK D L + VKE V + +
Sbjct: 290 LVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQVKETLDFR 341
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H +
Sbjct: 342 LGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVR 401
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 402 GRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|427405817|ref|ZP_18896022.1| ribosome-associated GTPase EngA [Selenomonas sp. F0473]
gi|425708658|gb|EKU71697.1| ribosome-associated GTPase EngA [Selenomonas sp. F0473]
Length = 441
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 238/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMP--GVTRDRIYMDAEWLNREFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E + S IL + + +F++D R+GL D EV + LR+ KP+ +
Sbjct: 62 EFD-DSNHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVARLLRRTN---KPVTL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPIAISA + + +L +A+ +
Sbjct: 118 AVNKIDSFDR-----EALIYDFYALGLGDPIAISASNAMNLGDLLDAIVAAF-------- 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T+ E DE + +A+VGRPNVGKS+L+N LL E+RV+V G T
Sbjct: 165 ---------PTEAGDGGESDE----IAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV ++++A E
Sbjct: 212 RDAIDTHFTRDGAKYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAAVVLVLINAAEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G+++IVNK D+ + + + + +++ + + P
Sbjct: 272 ILEQDTKIAGYVHESGKGVIIIVNKWDIFPEKNDKSTLR-----FTDDLREKLGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKY 527
V++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 327 VLYTSALTGQRVDRVTELVKYVAEQQSMRIRTSVLNELIRDAVSVNPPPTKKGRQLKILF 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRF+ L+E F G P+R+ R+
Sbjct: 387 LTQVGIMPPTFIIFVNDPELMHFSYLRFIENRLRESFGFEGTPLRLIVRA 436
>gi|392960765|ref|ZP_10326230.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|421054477|ref|ZP_15517445.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|421057821|ref|ZP_15520586.1| GTP-binding protein engA [Pelosinus fermentans B3]
gi|421067194|ref|ZP_15528699.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|421071339|ref|ZP_15532459.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392440835|gb|EIW18495.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|392447255|gb|EIW24509.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392450622|gb|EIW27654.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|392454662|gb|EIW31484.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|392462100|gb|EIW38218.1| GTP-binding protein engA [Pelosinus fermentans B3]
Length = 440
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 248/469 (52%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS LFN + ++R ++V N P VTRD A+ D F ++D+ G+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIP--GVTRDRIYLDAEWLDREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E E +S +L + + +F++D + GL D EV LR + IVA
Sbjct: 62 EIE-SSDKMLTAMRYQAKLAIDEADAILFIVDGKVGLTSADEEVAIILRNTRKPV--IVA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK +++ A E LG GDPIAISA L + +L +++ + R+ N
Sbjct: 119 VNKVDNMQK-----ANEIYEFYNLGLGDPIAISAANALNIGDL-------LDEVVKRLPN 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D + ED+E+ +++A++GRPNVGKS+L+N L+ E+RV+V AG TR
Sbjct: 167 DEVVE-----------EDNET---IKVAVIGRPNVGKSSLVNRLVGEERVIVSDVAGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA---- 415
D++ HF + L+DTAG ++ K + P SVM++ + + R+ VV +V+DA
Sbjct: 213 DAIDTHFTKDDTSFVLIDTAGMRRKAKVELPVERYSVMRALRAVDRSDVVLIVIDAVDGV 272
Query: 416 -EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
E+ + + + G+ V+IVNK DLL ++L + I+T + + P+
Sbjct: 273 TEQDKKIAGYAHDAGKASVIIVNKWDLLEKDGKTSL------RYTENIRTELAFMQYSPI 326
Query: 470 VFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+F SAL + R++ + ++I ++ +R+ TS LN+ + + + Q + KI +
Sbjct: 327 LFISALTNQ-RVSRVTELIKFVAEQHTMRIATSVLNQVIEDAVSINPPPSQFGRRLKIYF 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ +PPTFV F++ + + + LRFL L+E F G P+++ R
Sbjct: 386 TTQPNVKPPTFVLFVNEPEIMHFSYLRFLENRLRESFGFEGTPLKLVVR 434
>gi|421845436|ref|ZP_16278590.1| GTP-binding protein Der [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411773339|gb|EKS56898.1| GTP-binding protein Der [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 490
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 230/474 (48%), Gaps = 38/474 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L A + LG G+ I+A G G+ L E L P ++D +
Sbjct: 115 LVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQ 169
Query: 298 VLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D Q + PEDD LP++LAIVGRPNVGKSTL N +L EDRV+
Sbjct: 170 EEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 229
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
V G TRDS+ + + R L+DTAG +R K + SV+++ + + A+VV
Sbjct: 230 VYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVM 289
Query: 411 LVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+DA E + ++ GR LV++VNK D L + VKE V + +
Sbjct: 290 LVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQVKETLDFR 341
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H +
Sbjct: 342 LGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVR 401
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 402 GRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|383816151|ref|ZP_09971553.1| GTP-binding protein Der [Serratia sp. M24T3]
gi|383294938|gb|EIC83270.1| GTP-binding protein Der [Serratia sp. M24T3]
Length = 493
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 236/486 (48%), Gaps = 58/486 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL + R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPG--LTRDRKYGRAEIEGNEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+G+ P D + + LR +
Sbjct: 59 GID--GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGVMPADQGIAQHLRSR--EKATF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSV 291
+ NK + L + A A+ LG G+ AI+A G G+T+L E + +P
Sbjct: 115 LVANKTDGLDADS-----ATADFYSLGLGEVYAIAASHGRGVTQLIEHVLIPFVGEKPEE 169
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQ 346
+ N + +D PED D + LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 VELSEEEANAAYWAEKLGDEDAI-PEDVEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILG 228
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
EDRV+V G TRDS+ + R L+DTAG +R K + SV+++ + +
Sbjct: 229 EDRVVVYDMPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIED 288
Query: 406 AHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV LV+DA E + ++ GR LV++VNK D LS + ++AV
Sbjct: 289 ANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEARDAVKD 340
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
+ + + + F SAL G G + V + Y R+ TS L R ++ H
Sbjct: 341 ALDMRLGFIDFARIHFISALHGSGVGNLFESVNEAYNCATKRVGTSLLTRIMQMAAEDH- 399
Query: 516 WKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
QP K+KY PP V + K L+D+ R+L + ++
Sbjct: 400 ------QPPLVNGRRVKLKYAHAGGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLEIM 453
Query: 568 GIPIRI 573
G PIRI
Sbjct: 454 GTPIRI 459
>gi|227903851|ref|ZP_04021656.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
gi|227868738|gb|EEJ76159.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
Length = 435
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 239/478 (50%), Gaps = 61/478 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+G+PNVGKS LFNR+I +R A+V + P VTRD A+ +F ++D+
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKP--GVTRDRNYAQAEWMGHKFDLIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ E G I D + + + + +V + + LD + + L + KP+
Sbjct: 60 GITWEG--GKIEDEIRAQAEIAIEEADVIVMLTNVVNHVTDLDERIARLLYRTK---KPV 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK ++ + LG GDPI +S+ G G+ +L +
Sbjct: 115 ILAVNKADNPEQ-----RNDIYDFYSLGLGDPIPVSSSHGTGIGDLLD-----------E 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ND + +S DV S +++GRPNVGKS+L+N LL EDRV+V E G
Sbjct: 159 IVNDFPAEKDSEADDVIS-----------FSMIGRPNVGKSSLVNKLLGEDRVIVANEEG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F G +VDTAG +R K + SV+++ + R+ VV LVLDA
Sbjct: 208 TTRDAVDTPFTKDGIKFKVVDTAGIRRRGKVYEKTEKYSVLRAMSAIERSDVVLLVLDAS 267
Query: 416 ----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E+ + V E GRG++++VNK DL SA + +EI++ +
Sbjct: 268 TGIREQDKHVAGYAHEAGRGIIIVVNKWDLPEKNSTSA------KEFEREIRSEFQYLDY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL---RKVMGRHSWKDQSAQP 523
P++F SA G+ + V + Y+ R+ +S LN L K++ K + +
Sbjct: 322 APILFVSAKTGQRIDQIPSMVKEVYENQNQRIQSSVLNDLLLEASKLVPTPMIKGK--RL 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y TQV PPTFV F++ + + + RFL L+++FD G PI+I +PRK
Sbjct: 380 RVYYMTQVSTNPPTFVVFVNDPELMHFSYERFLINQLRQNFDFTGTPIKI----LPRK 433
>gi|418327953|ref|ZP_12939085.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
14.1.R1.SE]
gi|365232512|gb|EHM73508.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis
14.1.R1.SE]
Length = 436
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 245/475 (51%), Gaps = 62/475 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+E
Sbjct: 6 VAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGIEI 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-AM 241
R A + + IFM++VR GL D V + L K KP+V A+
Sbjct: 64 GDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVLAV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 119 NKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF------- 163
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG TRD
Sbjct: 164 -----NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRD 212
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE--- 417
++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 213 AIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQGII 272
Query: 418 -------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
A EEG+ +V++VNK D + ++S K+ + V E Q + +
Sbjct: 273 EQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTDDVRNEFQF----LDYAQIA 326
Query: 471 FTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
F SA EG + ++Q + ++K R+ +S LN + + + + D+ + +
Sbjct: 327 FVSAKEGLRLKTLFPYINQASENHKK---RVQSSTLNEVVTDAISMNPTPTDKGRRLNVF 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 384 YTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|452976683|gb|EME76498.1| GTP-binding protein Der [Bacillus sonorensis L12]
Length = 436
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 233/470 (49%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNHDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E L + + + IFM + R G+ D EV K L + KP+V
Sbjct: 62 EI--GDEPFLAQIRHQAEIAMDEADVIIFMTNGREGVTAADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L
Sbjct: 117 AVNKVDN-----PEMRANIYDFYSLGFGEPYPISGTHGLGLGDLL--------------- 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D+ +++ + D + DDE +Q ++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 157 -DAVSEHFKNIPD--TKYDDEV---VQFCLIGRPNVGKSSLVNAMLGEERVIVSNIAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y R +VDTAG ++ K + SV+++ K + R+ VVA+VLD EE
Sbjct: 211 RDAVDTKFTYNQREFVIVDTAGMRKKGKVYESTEKYSVLRALKAIDRSEVVAVVLDGEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK D + + R + Q I+ + P
Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVEKDE------RTMKEFEQNIREHFQFLDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
V+F SAL + +M ++ + +R+ T+ LN + + + S Q KI Y
Sbjct: 325 VLFMSALTKKRIHTLMPAIVTASENHSMRVQTNILNDIIMDAVAMNPTPTHSGQRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PPTFV F++ + + + RFL +++ F G PI+I R+
Sbjct: 385 ATQVAVKPPTFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARA 434
>gi|429759353|ref|ZP_19291852.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
gi|429179629|gb|EKY20868.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
Length = 454
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 247/477 (51%), Gaps = 55/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 14 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 71
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 72 EFVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSG---KPVV 128
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 129 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 168
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V D+E + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 169 LDDTVKHFPPVGTNV----DEEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 222
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + + L+DTAG ++ K ++ S+++S +++ R+ +V LVLD
Sbjct: 223 TRDSIDTHWTHGDQKFVLIDTAGMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVD 282
Query: 416 ---EEVR-----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + A E G+G++++VNK DL+ + L R E + E+ +
Sbjct: 283 GVTEQDKKIAGYAYEAGKGVIIVVNKWDLVEKDDKTTL--RYTEDIYDELGF----LQFA 336
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 337 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 394
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R+
Sbjct: 395 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLILRGKKRE 451
>gi|429081712|ref|ZP_19144812.1| GTP-binding protein EngA [Cronobacter condimenti 1330]
gi|426549604|emb|CCJ70853.1| GTP-binding protein EngA [Cronobacter condimenti 1330]
Length = 492
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 236/480 (49%), Gaps = 48/480 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ + +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREYICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GSEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEGIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + L A A+ LG G+ AI+A G G+T L E L P ++D
Sbjct: 115 LVANKTDGLDPDQ-----AVADFYSLGLGEIHAIAASHGRGVTSLLEHVLMPWMDDVNPP 169
Query: 294 --------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
Y + + + +D +P+D LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 EEVDEEAEYWAQFEAEQNGEVVEEEEDDFNPQD----LPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + E GR L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVFDMPGTTRDSIYIPMERDGREFVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VK+ V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKDEVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ TS L R ++ H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTSLLTRIMKMAEEDH 397
Query: 515 SWKD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 398 QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 457
>gi|387902351|ref|YP_006332690.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
gi|387577243|gb|AFJ85959.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
Length = 433
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 232/460 (50%), Gaps = 49/460 (10%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL R R+ALV + P +TRD G ++G+ + V+D+ G E A G IL
Sbjct: 1 MGKSTLFNRLTRSRDALVADLP--GLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDG-IL 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAMNKCESLHN 249
A T + + +F++D R+GL P D + +LRK +PI + +NK E +
Sbjct: 58 HEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFLVVNKAEGM-- 112
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSS 309
A + LG GDP AISA G G+T++ +N++ +
Sbjct: 113 ---KYTAVATDFYELGLGDPRAISAAHGDGVTDM---------------INEALEVAYAG 154
Query: 310 TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 369
+ +D++ +++AIVGRPNVGKSTL+NAL+ EDRV+ G TRDS+ V FE
Sbjct: 155 QPE--EADDNDPSRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFER 212
Query: 370 QGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVRA-------- 420
G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA++ +
Sbjct: 213 NGKKYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAG 272
Query: 421 --VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGR 478
VE+GR LV+ VNK D L R K + ++++ + + + SA +
Sbjct: 273 FVVEQGRALVIGVNKWDGLDDHARD----RAKADLTRKLKFLDFAKSH----YISAAKKT 324
Query: 479 GRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYFTQVKARPPT 537
G A+M V D Y +LPT +L R L V + + +PK++Y Q PP
Sbjct: 325 GIGALMRSVDDAYAAAMAKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPL 384
Query: 538 FVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
V + +++ R+L +E F L G P+RI RS
Sbjct: 385 IVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 424
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSAGLE 181
+ I+GRPNVGKS L N LI + ++ P TRD I + G ++ ++D+AGL
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMP--GTTRDSIYVDFERNGK-KYTLIDTAGLR 226
Query: 182 TEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+++ + + T ++ I ++D + + D + ++ + + ++
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRAL--VIG 284
Query: 241 MNKCESLHNGTGSLAGAAAESLM--LGFGDPIAISA--ETGLGMTELYEALRPSVED 293
+NK + L + A A + L F ISA +TG+G AL SV+D
Sbjct: 285 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIG------ALMRSVDD 335
>gi|399890216|ref|ZP_10776093.1| GTP-binding protein Der [Clostridium arbusti SL206]
Length = 438
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 233/474 (49%), Gaps = 61/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L +R A+V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTP--GVTRDRIYAEAEWINNLFTIIDTGGI 61
Query: 181 ETEATSGSI--LDRTAGM---TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
E E+ + + R A M TA+V+ +F++D + GL D EV LRK
Sbjct: 62 EPESNDIIVAQMRRQAQMAIETADVI------VFIVDGKQGLTDADNEVALMLRKSR--- 112
Query: 236 KPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KPIV +NK + L + S E LG GDPI ISA GLG+ ++
Sbjct: 113 KPIVLVVNKIDKLADEQNSF-----EFYNLGIGDPITISASQGLGLGDML---------- 157
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
D ++ ++ DE+ ++A+VGRPNVGKS+L+N LL EDRV+V
Sbjct: 158 ------DKVVEHFKEIHNI-----DENDEYTKIAVVGRPNVGKSSLINRLLGEDRVIVSD 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVL 413
G TRD+V + E L+DTAG ++ K K SV+++ + R+ V L+L
Sbjct: 207 IPGTTRDAVDSYLETDKGKFILIDTAGLRRKSKVKEEIERYSVIRTLAAIERSDVCILIL 266
Query: 414 DAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E A E + ++VIVNK DL+ + + + IQ +
Sbjct: 267 DATEQLSDQDEKIIGYAHELSKAIMVIVNKWDLIEKDDKTM------DQFKKNIQYKLSF 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQ 522
+ +F SA G+ ++ +V Y +C R+ T LN + K V+ + +
Sbjct: 321 MAYAQYMFISAKTGQRVNKLLDEVKKCYDNYCRRISTGVLNDVISKAVLMKEPPVVALKR 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV +PPTF+ F++ L + R+L L+E F+ G I++ R
Sbjct: 381 LKIYYVTQVAIKPPTFIFFVNDTNALHFSYERYLENKLRESFNFAGTGIKVIFR 434
>gi|308069529|ref|YP_003871134.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
gi|305858808|gb|ADM70596.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
Length = 440
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 241/469 (51%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+I R ++V + P +TRD G+++ F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPG--ITRDRIYGISEWNGKSFSIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ ++ M A + + + +FM D ++G+ D EV + L + I IV
Sbjct: 62 EIDGED--VILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPI--IV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L S A E GFGDPIA+S G G+ +L +A+ ++ +
Sbjct: 118 AVNKVDNL-----SRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAITSNLPEL----- 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
ED + +++A++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 168 ----------------EEDHYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE G+ L+DTAG +R K + SVM++ + + RA VV +V++ EE
Sbjct: 212 RDAIDTPFEKDGQKYVLIDTAGMRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ + +VNK D++ + + +++ +I+ +T P
Sbjct: 272 IIEQDKHIAGYAYEAGKASLFVVNKWDVVD-KDDKTMHQ-----FETKIRDHFLFMTYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+VF SA + ++ V Q+ LR+ T LN + + + D+ + +I Y
Sbjct: 326 IVFLSAKTKQRLQKLLPVVQHVAQQHVLRIQTHLLNDVISDAVAINPPPTDKGRRLRINY 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPT V F++ + + + R+L ++ F+ G PIRI R
Sbjct: 386 VTQVAVKPPTMVVFVNDPEIMHFSYERYLENKIRAAFNFEGTPIRIFTR 434
>gi|343494444|ref|ZP_08732706.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
gi|342825349|gb|EGU59848.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
Length = 495
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 246/518 (47%), Gaps = 74/518 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAQLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D + + LRK KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADEAIAQHLRKIE---KPA 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + + A A+ LG D I+A G G+ L + AL P E++
Sbjct: 114 MLVVNKVDGIDADS-----ACADFWKLGVDDMYQIAAAHGRGVAALIDRALNPFAEEF-- 166
Query: 297 RVLNDSCTQNNSSTQDVTSPED-DESKL-----------------PLQLAIVGRPNVGKS 338
+ +D+T ED +E KL P++LAI+GRPNVGKS
Sbjct: 167 ------AAKTEGELEDLTEFEDPEEEKLDYTEEEAEAEFKRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E R L+DTAG +R + + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRRRTRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDT 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEQVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMAQDDH-------QPPMVRGRRVKLKYAHAGGYNPPIVVVHGNLVHELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGR 597
+ ++ G PIRI +S S++ Q+ R
Sbjct: 446 YRRSLEIMGTPIRIRFQSSDNPFEGKSNKLTLSQERKR 483
>gi|300869581|ref|ZP_07114162.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
gi|300332449|emb|CBN59362.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
Length = 454
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 249/497 (50%), Gaps = 67/497 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NR ++++V++ P +TRD A GD F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRFAESQDSIVHDQP--GMTRDRTYKNAYWGDREFQVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + + L LA+ AIF++D + GL D + +WLR+ ++ ++
Sbjct: 61 LVFDDNT-EFLPLIREQAMAALAEASAAIFVVDGQIGLTGGDEAIAEWLRQQ--RVPVLL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYML 296
A+NKCES G AA+ LG G+P IS G G EL + L P+V +
Sbjct: 118 AVNKCESETEGLTQ----AAQFWELGLGEPFPISGIHGNGTGELLDELISHLPAVGEL-- 171
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
PE +E+K+ AIVGRPNVGKS+LLNA L E R +V P +
Sbjct: 172 -------------------PEIEETKV----AIVGRPNVGKSSLLNAFLGETRAIVSPIS 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ E G T L+DTAG +++ E GP + ++ K + RA VV LV+DA
Sbjct: 209 GTTRDAIDTVVERNGTTYRLIDTAGIRKKKNVEYGPEFFGINRAFKAIRRADVVLLVIDA 268
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ R EEGR V++VNK D + + ++ +Y K E++T + V
Sbjct: 269 VDGVTDQDQKLADRISEEGRACVIVVNKWDAIE-KDSTTIYDYEK-----EVKTRLYFVD 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDT----YQKWCLRLPTSRLNRWLRKVMGRHS--WKDQ 519
++F SA G+ R+ + +++DT +Q+ R+ T+ +N + + HS Q
Sbjct: 323 WAEMIFVSATTGQ-RVEKILELVDTAATAHQR---RVTTAVINEVIEEATSWHSPPVTRQ 378
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS-V 578
Q KI Y TQV+A+PPT F++ ++ R++ ++ G P+R+ R
Sbjct: 379 GRQGKIYYGTQVRAQPPTIALFVNDPLRFNENYRRYIETQFRKQLGFIGTPMRLVWRGKK 438
Query: 579 PRKCGSSSSRQNTGQKV 595
PR SR N +V
Sbjct: 439 PRDL--EKSRTNRAIRV 453
>gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli]
Length = 503
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 233/477 (48%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D L + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLRQEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|197117132|ref|YP_002137559.1| GTP-binding protein EngA [Geobacter bemidjiensis Bem]
gi|238690874|sp|B5EE25.1|DER_GEOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|197086492|gb|ACH37763.1| GTPase EngA [Geobacter bemidjiensis Bem]
Length = 440
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 234/478 (48%), Gaps = 55/478 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + I+GRPNVGKS LFNRL+ RR+A+V + P VTRD D+ F ++D+
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMP--GVTRDRNYAEVNRFDVPFILVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E TS +L + + + + +F++D R GL P D +V LR+ + I
Sbjct: 59 GFEPE-TSDRLLQQMREQSRFAMDEADLILFIMDARGGLTPADRDVVDMLRRINKPVFYI 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK + A + LG ISAE G+ +L + + ++
Sbjct: 118 I--NKVDGEKQ-----EAEAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAAI------- 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLP---LQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
P D E +L ++A+VGRPNVGKSTL+N LL +RV+ P
Sbjct: 164 -----------------PYDREKELDEEITRIAVVGRPNVGKSTLVNRLLGYERVVANPT 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD+V F + L+DTAG ++ K + SVM + +++ RA VV +VL+
Sbjct: 207 AGTTRDAVDTRFTVNKKPYLLIDTAGIRRKGKTVQKVEKYSVMDALRSIERADVVLIVLN 266
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
AEE A E GRG + +VNK D L+ + NS++ K +EI+ +
Sbjct: 267 AEEGVTEQDSKIAGYAYEAGRGCIFVVNKWDTLA-KDNSSIAK-----FTEEIRRNFKYL 320
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQP 523
P++F SA G+ ++ +V +++C R+ T LNR + + V H+ +
Sbjct: 321 PFAPILFVSAETGQRTGKIIAEVDQVMEQYCKRVTTGELNRVFTQAVDENHAPLSAGRRV 380
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
K + TQV +PP+FV F + + + + R++ +E F G P+++ R +K
Sbjct: 381 KFYFATQVAVKPPSFVVFTNCPEGIHFSYERYIMNRFREAFGFNGTPLKLIFRGRDKK 438
>gi|434389307|ref|YP_007099918.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
gi|428020297|gb|AFY96391.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
Length = 452
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 242/483 (50%), Gaps = 63/483 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL RE++V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGARESIVHDEPG--VTRDRTYRRAFWQDREFVVVDTGG 60
Query: 180 L----ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
L ETE L R MTA L++ AIF++D + G+ D E+ WLR +I
Sbjct: 61 LVFDDETEFLP---LIREQAMTA--LSQASAAIFVVDGQQGITGGDQEIASWLR--VQKI 113
Query: 236 KPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
VA+NKCES G A A+ LG G+P AIS+ G G EL + L +
Sbjct: 114 PVFVAVNKCESETVG----AMQTADFWELGIGEPYAISSIHGSGTGELLDEL-------I 162
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
L + ++V PE +++AI+GRPNVGKS+LLNA L E+R +V P
Sbjct: 163 LHL---------PIMEEVDEPE-------VRIAIIGRPNVGKSSLLNAFLGENRSIVSPI 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVL 413
+G TRD++ G L+DTAG ++R+K + GP + ++ K + R VV LVL
Sbjct: 207 SGTTRDAIDTVITRNGANYRLIDTAG-IRRKKNVDYGPEFFGINRAFKAIDRCDVVLLVL 265
Query: 414 DAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
+A + R EEGR V++VNK D + + + +Y +++ + +
Sbjct: 266 NAVDGVTEQDQKLAGRISEEGRACVIVVNKWDAVE-KDSYTIYD-----YQEQLNSRLNF 319
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQS 520
+F SAL G+ R+ + +++D ++ R+ T+ +N L + H+ Q
Sbjct: 320 TEWAENIFVSALTGQ-RVDKILEIVDRAVEQHRRRVSTAVINEVLEESTTWHNPLVTRQG 378
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
Q KI Y TQV ++PPT F++ +D R++ + G P+R+ R +
Sbjct: 379 KQGKIYYGTQVSSQPPTIALFVNDPSRFNDNYRRYIENQFRTQLGFAGTPLRLLWRGKKQ 438
Query: 581 KCG 583
+ G
Sbjct: 439 REG 441
>gi|22298421|ref|NP_681668.1| GTP-binding protein EngA [Thermosynechococcus elongatus BP-1]
gi|34222551|sp|Q8DKI1.1|DER_THEEB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|22294600|dbj|BAC08430.1| GTP-binding protein [Thermosynechococcus elongatus BP-1]
Length = 449
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 236/487 (48%), Gaps = 58/487 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V ++GRPNVGKS NRL R+A+V++ P VTRD A D F V+D+ G
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPG--VTRDRTYRPAFWQDREFLVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + S + L R A L + AIF++D ++G LD E+ WLR+ + + +
Sbjct: 61 LVFDDDSDFLPLIRQQAELA--LQEATAAIFVVDGQAGPTALDYEIAAWLRQLS--LPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYM 295
VA+NKCES G AAE LG G+P IS+ G G EL + L P+ E
Sbjct: 117 VAVNKCESRQMGQVQ----AAEFWSLGLGEPYPISSIHGSGTGELLDQLITYLPAGE--- 169
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
T PE E +Q+AI GRPNVGKS+LLNAL+ DR +V P
Sbjct: 170 ------------------TLPEAPE----IQVAIAGRPNVGKSSLLNALIGSDRAIVSPI 207
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
+G TRD++ E+ G +DTAG +R GP SV ++ K + R+ VV LVLD
Sbjct: 208 SGTTRDAIDTVIEHGGTQYRFIDTAGIRKRTHVAYGPEMFSVHRAFKAIHRSDVVLLVLD 267
Query: 415 A-EEV---------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A EE+ ++GR V+IVNK D + + + A + + +
Sbjct: 268 ALEEITEQDQRLAGHIADQGRACVLIVNKWDAVLDKDTYTI-----NAYRDRLYQRLHFL 322
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQ 522
+F SA G+ + V ++ R+ T+ +N +++ + H+ Q Q
Sbjct: 323 EWADALFVSAHTGQRLEKIFAAVDAAVEQHRRRVTTAVVNDVIQEALHWHTPPATRQGRQ 382
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS-VPRK 581
KI Y TQV +PPTF F++ K + R++ +++ G PIR+ RS PR+
Sbjct: 383 GKIYYATQVATQPPTFAIFVNDAKLFKENYRRYIESQIRQQLGFRGTPIRLLWRSKKPRE 442
Query: 582 CGSSSSR 588
+R
Sbjct: 443 AAELVAR 449
>gi|215487861|ref|YP_002330292.1| GTP-binding protein EngA [Escherichia coli O127:H6 str. E2348/69]
gi|254783152|sp|B7UGV7.1|DER_ECO27 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|215265933|emb|CAS10342.1| predicted GTP-binding protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 490
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K LSD+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLSDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|253699395|ref|YP_003020584.1| GTP-binding protein EngA [Geobacter sp. M21]
gi|259645878|sp|C6E0Y6.1|DER_GEOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|251774245|gb|ACT16826.1| small GTP-binding protein [Geobacter sp. M21]
Length = 440
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 235/475 (49%), Gaps = 49/475 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + I+GRPNVGKS LFNRL+ RR+A+V + P VTRD D+ F ++D+
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMP--GVTRDRNYAEVNRFDVPFILVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E TS +L + + + + +F++D R GL P D +V LR+ + I
Sbjct: 59 GFEPE-TSDRLLQQMREQSRFAMDEADLILFVMDARGGLTPADRDVVDMLRRINKPVFYI 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK + A + LG ISAE G+ +L + + ++
Sbjct: 118 I--NKVDGEKQ-----EAEAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAAI------- 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ S +++T ++A+VGRPNVGKSTL+N LL +RV+ P AG
Sbjct: 164 ---PYDREKESDEEIT-----------RIAVVGRPNVGKSTLVNRLLGYERVVANPTAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD+V F + L+DTAG ++ K + SVM + +++ RA VV +VL+AEE
Sbjct: 210 TRDAVDTRFTVNKKPYLLIDTAGIRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEE 269
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GRG + +VNK D L+ + NS++ K +EI+ +
Sbjct: 270 GVTEQDSKIAGYAYEAGRGCIFVVNKWDTLA-KDNSSIAK-----FTEEIRRNFKYLPFA 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNR-WLRKVMGRHSWKDQSAQPKIK 526
P++F SA G+ ++ +V +++C R+ T LNR + + V H+ + K
Sbjct: 324 PILFVSAETGQRTGKIIAEVDQVMEQYCKRVTTGELNRVFTQAVDENHAPLSAGRRVKFY 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ TQV +PP+FV F + + + + R++ +E F G P+++ R +K
Sbjct: 384 FATQVAVKPPSFVVFTNCPEGIHFSYERYIMNRFREAFGFNGTPLKLIFRGRDKK 438
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 109 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 168
P D K + + ++GRPNVGKS L NRL+ E +V N P TRD + +
Sbjct: 164 PYDREKESDEEITRIAVVGRPNVGKSTLVNRLL-GYERVVAN-PTAGTTRDAVDTRFTVN 221
Query: 169 DLRFKVLDSAGLETEATSGSILDRTAGMTA-NVLAKTQFAIFMIDVRSGLHPLDLEVGKW 227
+ ++D+AG+ + + +++ + M A + + + +++ G+ D ++ +
Sbjct: 222 KKPYLLIDTAGIRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEEGVTEQDSKIAGY 281
Query: 228 LRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAE----SLMLGFGDPIAISAETGLGMTEL 283
+ I +NK ++L S+A E L F + +SAETG ++
Sbjct: 282 AYEAGRGC--IFVVNKWDTLAKDNSSIAKFTEEIRRNFKYLPFAPILFVSAETGQRTGKI 339
Query: 284 YEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPL 325
+ +E Y RV N TQ V DE+ PL
Sbjct: 340 IAEVDQVMEQYCKRVTTGEL--NRVFTQAV-----DENHAPL 374
>gi|419701355|ref|ZP_14228956.1| GTP-binding protein Der [Escherichia coli SCI-07]
gi|380347556|gb|EIA35843.1| GTP-binding protein Der [Escherichia coli SCI-07]
Length = 490
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D RSGL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGETYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197]
Length = 503
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 235/479 (49%), Gaps = 44/479 (9%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + M ++
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIM--TMAVEDYQ 409
Query: 518 D---QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 410 PPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|303229883|ref|ZP_07316659.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
gi|302515439|gb|EFL57405.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
Length = 444
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 247/477 (51%), Gaps = 55/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V D+E + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DEEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + + L+DTAG ++ K ++ S+++S +++ R+ +V LVLD
Sbjct: 213 TRDSIDTHWTHGDQKFVLIDTAGMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVD 272
Query: 416 ---EEVR-----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + A E G+G++++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVIIVVNKWDLVEKDDKTTL--RYTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R+
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLILRGKKRE 441
>gi|218245012|ref|YP_002370383.1| GTP-binding protein EngA [Cyanothece sp. PCC 8801]
gi|257058036|ref|YP_003135924.1| GTP-binding protein EngA [Cyanothece sp. PCC 8802]
gi|226741133|sp|B7K1S0.1|DER_CYAP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218165490|gb|ACK64227.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
gi|256588202|gb|ACU99088.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
Length = 452
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 240/472 (50%), Gaps = 54/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P R R G + D F+++D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQ--DRDFQIVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R + A L + AIF++D ++G DLE+ WLR+ + +
Sbjct: 61 LVFDDDTEFLPLIREQSLAA--LNEASAAIFVVDGQTGPTTGDLEIADWLRQQP--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G A + LG G+P IS G G EL
Sbjct: 117 LAVNKCESPELGLIQ----ATQFWELGLGNPYPISGIHGNGTGEL--------------- 157
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D T + PE+ +++AI+GRPNVGKS+LLNALL E+R +V P +G
Sbjct: 158 LDDLITY-------LPPPEEITQSDEIKVAIIGRPNVGKSSLLNALLGENRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ ++ +T L+DTAG ++R+K E G S+ ++ K + R VV V+DA
Sbjct: 211 TRDAIDTVIQHNEQTYRLIDTAG-IRRKKNVEYGAEFFSINRAFKAIRRCDVVLFVIDAI 269
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ R +EEGR +V+++NK D + + + +Y+ I + + +
Sbjct: 270 DGVTDQDLKLADRIIEEGRSVVLVINKWDAVD-KDSYTIYE-----YKTNIFSRLYFMEW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPK 524
P++F SA+ G+ ++ V + ++ R+ T+ +N L++ + HS Q Q K
Sbjct: 324 APIIFVSAMTGQRVNKILELVNSSTEEHRRRVTTAVINEVLQEAVTWHSPPTTRQGKQGK 383
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQV +PPT F++ K ++ R++ ++ G PIR+ R
Sbjct: 384 IYYGTQVSTQPPTIALFVNDPKRFNENYRRYIESQFRKQLGFPGTPIRLLWR 435
>gi|442610720|ref|ZP_21025430.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747749|emb|CCQ11492.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 490
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 238/512 (46%), Gaps = 72/512 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A F V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQANYEGFEFIVVDTG 58
Query: 179 GL-------ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKH 231
G+ ETE S+L + + +F++D R+GL D + + LRK
Sbjct: 59 GIDGSEEGIETEMAQQSLL---------AIEEADIVLFLVDARAGLTSADQGIAQHLRKQ 109
Query: 232 APQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPS 290
Q K V NK + + + A AE L GD + I+A G G+T+L E LRP
Sbjct: 110 --QKKSFVVANKTDGIDADS-----AVAEFYQLALGDVLQIAAAHGRGVTQLLEHTLRPL 162
Query: 291 VEDYMLRVLND---------SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLL 341
+ D + ++ + + + +DV D+ P++LAI+GRPNVGKSTL
Sbjct: 163 LGDLQEEIASEEEYGEEAFAAFDEEHVEGEDVEQINADK---PVKLAIIGRPNVGKSTLT 219
Query: 342 NALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSR 400
N +L E+RV+V G TRDS+ + R L+DTAG +R+K SV+++
Sbjct: 220 NRILGEERVIVYDMPGTTRDSIYIPMTRNDREYILIDTAGVRKRKKVSDVVEKFSVIKTL 279
Query: 401 KNLMRAHVVALVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVK 450
+ + A+V+ LV+DA E A+ GR LV+ VNK D L + VK
Sbjct: 280 QAIEDANVILLVIDAREGISDQDLSLLGFALNAGRSLVIAVNKWD--------GLDEYVK 331
Query: 451 EAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKV 510
E + E+ + + + F SAL G G + V + Y R+ T+ L R +
Sbjct: 332 ERIKSELDRRLGFIDFARIHFISALHGTGVGHLFESVDEAYDSATRRVSTAMLRRIMDMA 391
Query: 511 MGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKE 562
H QP K+KY PP FV + L D+ R+L ++
Sbjct: 392 QADH-------QPPMVRGRRVKLKYAHAGGYNPPRFVIHGNQVDDLPDSYKRYLMNYYRK 444
Query: 563 DFDLGGIPIRITQRSVPRKCGSSSSRQNTGQK 594
++ G PI+I R S++ QK
Sbjct: 445 ALNIMGTPIKIEFREGENPYAGRSNKMTISQK 476
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 52 AAGSLYQVGSSLK---CNLLPEVPRGFCGVVQNE-ALEDTHVEPEPDGVVEDHKVKPLYE 107
A G + Q+ ++ LL R G +Q E A E+ + E E+H
Sbjct: 136 ALGDVLQIAAAHGRGVTQLLEHTLRPLLGDLQEEIASEEEYGEEAFAAFDEEHV------ 189
Query: 108 KPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKL 167
+ D +I+ + + IIGRPNVGKS L NR++ +VY+ P TRD
Sbjct: 190 EGEDVEQINADKPVKLAIIGRPNVGKSTLTNRILGEERVIVYDMPG--TTRDSIYIPMTR 247
Query: 168 GDLRFKVLDSAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGK 226
D + ++D+AG+ ++++ + + T + + +ID R G+ DL +
Sbjct: 248 NDREYILIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVILLVIDAREGISDQDLSLLG 307
Query: 227 WLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIA---ISAETGLGMTEL 283
+ + ++A+NK + L + + LGF D ISA G G+ L
Sbjct: 308 FALNAGRSL--VIAVNKWDGLDEYVKERIKSELDR-RLGFIDFARIHFISALHGTGVGHL 364
Query: 284 YEALRPSVEDYMLRV 298
+E++ + + RV
Sbjct: 365 FESVDEAYDSATRRV 379
>gi|310642585|ref|YP_003947343.1| GTP-binding protein enga [Paenibacillus polymyxa SC2]
gi|386041647|ref|YP_005960601.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
gi|309247535|gb|ADO57102.1| GTP-binding protein engA [Paenibacillus polymyxa SC2]
gi|343097685|emb|CCC85894.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 440
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 241/469 (51%), Gaps = 51/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+I R ++V + P +TRD G+++ F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPG--ITRDRIYGISEWNGKSFSIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ ++ M A + + + +FM D ++G+ D EV + L + I IV
Sbjct: 62 EIDGED--VILKSIRMQAELAIEEADVIVFMSDAKAGITQADEEVAQMLYRSGKPI--IV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L S A E GFGDPIA+S G G+ +L +A+ ++ +
Sbjct: 118 AVNKVDNL-----SRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAITSNLPEL----- 167
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
ED + +++A++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 168 ----------------EEDHYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ FE G+ L+DTAG +R K + SVM++ + + RA VV +V++ EE
Sbjct: 212 RDAIDTPFEKDGQKYVLIDTAGMRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ + +VNK D++ + + +++ +I+ +T P
Sbjct: 272 IIEQDKHIAGYAYEAGKASLFVVNKWDVVD-KDDKTMHQ-----FETKIRDHFLFMTYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+VF SA + ++ V Q+ +R+ T LN + + + D+ + +I Y
Sbjct: 326 IVFLSAKTKQRLQKLLPVVQHVAQQHVMRIQTHLLNDVISDAVAINPPPTDKGRRLRINY 385
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPT V F++ + + + R+L ++ F+ G PIRI R
Sbjct: 386 VTQVAVKPPTMVVFVNDPEIMHFSYERYLENKIRAAFNFEGTPIRIFTR 434
>gi|403059486|ref|YP_006647703.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806812|gb|AFR04450.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 495
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 239/483 (49%), Gaps = 51/483 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGHEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+GL P D + K LR + +
Sbjct: 59 GID--GTEDGVETRMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR--EKTTV 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA-LRPSVEDYMLR 297
+ NK + L A+ LG G+ AI+A G G+T L E L P V+D +
Sbjct: 115 LVANKTDGLDPDM-----VTADFYSLGMGEVYAIAASHGRGVTSLLETVLLPFVQDEIEE 169
Query: 298 VLNDSCTQNNSS---------------TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
+ + + N++ +D +PED LP++LAIVGRPNVGKSTL N
Sbjct: 170 PVELTEEEENAAYWAALEAEEQASEEEAEDDFNPED----LPIKLAIVGRPNVGKSTLTN 225
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + R L+DTAG +R K + SV+++ +
Sbjct: 226 RILGEERVVVFDMPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQ 285
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + V+E
Sbjct: 286 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVRE 337
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + + F SAL G G + V + Y R+ T+ L R ++
Sbjct: 338 QVKETLDLRLGFIDFARIHFISALHGSGVGNLFESVTEAYSCATRRVSTAMLTRIMQMAS 397
Query: 512 GRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
H + + K+KY PP V + K L D+ R+L + ++ G P
Sbjct: 398 DDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLEVMGTP 457
Query: 571 IRI 573
IRI
Sbjct: 458 IRI 460
>gi|262274783|ref|ZP_06052594.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886]
gi|262221346|gb|EEY72660.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886]
Length = 501
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 236/489 (48%), Gaps = 60/489 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A LG+ F V+D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGKALLGEHEFIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + + A + + + +FM+D R+GL D + + LR Q K
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIEEADVVLFMVDGRAGLTVADEAIAQHLRSR--QKKTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ +NK + + A+AE LG + I+A G G+ L + AL+P E+
Sbjct: 115 LVVNKVDGIDPD-----AASAEFWQLGMEEMYQIAAAHGRGVLALIDRALKPFAEELAGN 169
Query: 298 VLND--------SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNA 343
+D + Q+ + + ED ES LP++ +I+GRPNVGKSTL N
Sbjct: 170 EEDDGKEGLVDLTGEQDEDKDEKDLTEEDAESALERLRNLPIKFSIIGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKN 402
+L E+RV+V G TRDS+ + E GR ++DTAG +R++ SV+Q+ K
Sbjct: 230 ILGEERVVVYDMPGTTRDSIYIPMERDGREYVIIDTAGVRRRKRVNDKVEKFSVVQTLKA 289
Query: 403 LMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E A+ GR +V+ VNK D L VKE
Sbjct: 290 IEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDSDVKER 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V E+ + V + F SAL G G + + + Y+ R+ TS L R ++
Sbjct: 342 VKSELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYESATRRISTSMLTRIMKMAQD 401
Query: 513 RHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDF 564
H QP K+KY PP V + + L D+ R+L ++
Sbjct: 402 DH-------QPPMIRGRRVKLKYAHAGGYNPPIIVIHGNLVRELPDSYKRYLMNYYRKSL 454
Query: 565 DLGGIPIRI 573
++ G PIRI
Sbjct: 455 EIMGTPIRI 463
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 23/284 (8%)
Query: 51 SAAGSLYQVGSSLKCNLLPEVPRGFCGVVQN------EALEDTHVEPEPDGVV------- 97
+A+ +Q+G + RG ++ E L + +G+V
Sbjct: 127 AASAEFWQLGMEEMYQIAAAHGRGVLALIDRALKPFAEELAGNEEDDGKEGLVDLTGEQD 186
Query: 98 EDHKVKPLYEKPVDFTKIDINLLPTVM-IIGRPNVGKSALFNRLIRRREALVYNTPDDHV 156
ED K L E+ + + LP IIGRPNVGKS L NR++ +VY+ P
Sbjct: 187 EDKDEKDLTEEDAESALERLRNLPIKFSIIGRPNVGKSTLTNRILGEERVVVYDMP--GT 244
Query: 157 TRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDR-TAGMTANVLAKTQFAIFMIDVRS 215
TRD + + ++D+AG+ +++ + T + + +ID R
Sbjct: 245 TRDSIYIPMERDGREYVIIDTAGVRRRKRVNDKVEKFSVVQTLKAIEDANVVLLVIDARE 304
Query: 216 GLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIA---I 272
+ DL + + I ++A+NK + L + + + LGF D I
Sbjct: 305 NISDQDLSLLGFALNAGRSI--VIAVNKWDGLDSDVKERVKSELDR-RLGFVDFARIHFI 361
Query: 273 SAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSP 316
SA G G+ L+E+++ + E R+ T+ QD P
Sbjct: 362 SALHGTGVGHLFESIQEAYESATRRISTSMLTRIMKMAQDDHQP 405
>gi|431931237|ref|YP_007244283.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
gi|431829540|gb|AGA90653.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
Length = 470
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 225/471 (47%), Gaps = 44/471 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL R R+ALV +TP +TRD + G+ +LG + + V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADTPG--LTRDRQYGIGRLGPVPYVVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
GL E T + +R AG +A+ +F++D G P D E+ LR+ + +
Sbjct: 59 GLGGETTD--LAERMAGQVERAIAEADHLLFLVDAHDGCVPGDAEIATRLRRLGKSLTLV 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
V NK + A A+ +LG GDP+ I+A G G+ L E RV
Sbjct: 117 V--NKTDQRDPDL-----ATADFHLLGLGDPVPIAAVQGRGVAALME-----------RV 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L + N+ + + + DE +Q+AIVGRPN GKSTL+N LL E+RV+ G
Sbjct: 159 L--TGLANDDAVGGAEAADADEDPERIQVAIVGRPNAGKSTLINRLLGEERVVTYDSPGT 216
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE- 416
TRD+V + F+ L+DTAG +R + + SV+++ + + HVV LV+DA
Sbjct: 217 TRDTVFIPFDRLDGRYTLIDTAGVRRRARVQDTIEKFSVIKTLQAIAACHVVILVVDARA 276
Query: 417 ---------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+E GR LVV VNK D L + ++AV ++ + +
Sbjct: 277 GIGEHDATLAGHILESGRALVVAVNKWD--------GLDPQARQAVKDDLGRKLAFLDFA 328
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKIK 526
F SAL G G + +V Y L T L R L + H + K++
Sbjct: 329 AYHFISALHGSGVGLLFDEVDRVYANATRDLSTPELTRLLEAAVQEHQPPLVHGRRIKLR 388
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y Q PP V + + + R+L + + L G P+RI RS
Sbjct: 389 YAHQGGRNPPLIVIHGTQTDAVPASYQRYLVNRFRRELKLQGTPLRIELRS 439
>gi|404493026|ref|YP_006717132.1| GTP-binding protein Der [Pelobacter carbinolicus DSM 2380]
gi|123574290|sp|Q3A4Q5.1|DER_PELCD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77545090|gb|ABA88652.1| GTPase EngA [Pelobacter carbinolicus DSM 2380]
Length = 439
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 234/467 (50%), Gaps = 50/467 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS LFNR++ R A+V + P VTRD F ++D+ G
Sbjct: 1 MSVVAIVGRPNVGKSTLFNRILGTRRAIVEDYPG--VTRDRNYAQVTRYGTPFVLIDTGG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E A+ +L + + + + +F++D + GL P D EV LR+ KP++
Sbjct: 59 FEP-ASQNRLLKQMREQSELAVEEADVILFVVDAKEGLTPSDDEVAGMLRRSG---KPVL 114
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK + S AA+E LG +SAE G GM +L +
Sbjct: 115 YVVNKVDG-----DSHEAAASEFYALGVDQLYTVSAEHGRGMDDL--------------M 155
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ D S E+ +LA++GRPNVGKS+L+N ++ +R++ P AG
Sbjct: 156 AAVLAALPAPAKLDARSCEET------RLAVIGRPNVGKSSLINRMIGVERLVANPTAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ F Y ++ L+DTAG ++ + ++ SV+QS K + RAHVV +V+DAEE
Sbjct: 210 TRDSIDTPFVYNKKSYVLIDTAGIRRKGRVQQKLEKYSVIQSLKAMERAHVVLVVIDAEE 269
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A+E GR ++++VNK DL++ ++ K+ E V + +P
Sbjct: 270 GVTEQDLTVAGYALERGRAVLLVVNKWDLVT--KDHGTMKQYTEKVRHAFK-FLPFA--- 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKIK 526
P++F SAL G+ +M +V ++ ++PT LNR L + + H+ Q + K
Sbjct: 324 PIIFVSALSGQRVSKIMAEVEKVAIEFNRQVPTGVLNRVLEEAVLSHAPPMVQGKRLKFY 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Y TQ RPP+FV F + + + R+L+ L+E F G PIR+
Sbjct: 384 YMTQTGVRPPSFVVFGNRATGVHFSYERYLSNKLREAFGFSGCPIRL 430
>gi|291279462|ref|YP_003496297.1| small GTP-binding protein [Deferribacter desulfuricans SSM1]
gi|290754164|dbj|BAI80541.1| small GTP-binding protein [Deferribacter desulfuricans SSM1]
Length = 438
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 236/471 (50%), Gaps = 57/471 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG-- 179
TV IIGRPNVGKS LFNRL +R A+V + P VTRD E +A+ +FK++D+ G
Sbjct: 3 TVGIIGRPNVGKSTLFNRLAGKRIAIVDDMP--GVTRDRLEYIAEWEGKKFKIVDTCGYD 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L E ++ + L + F + ++D + GLHPLD V LR+ + K IV
Sbjct: 61 LREELLKKEMIKQFYAS----LDEADFFVLLVDAKEGLHPLDEMVCNILRER--EKKFIV 114
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
NK ++ L A+ LG + I ISA G + +L
Sbjct: 115 VANKVDN-----EKLQSFVADFYQLGVEEIIPISATHGKNVD----------------IL 153
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D +N ++VT D +++ +VGRPNVGKS+L+N+ L ++R++V P G T
Sbjct: 154 LDKIIENYVEDEEVTDFID-----SIKVVVVGRPNVGKSSLINSWLGDERLIVTPIPGTT 208
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQRE---KEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
RDSV +FEY + L+DTAG ++ K+K +S + RA + ++DA
Sbjct: 209 RDSVDTYFEYNSKKYTLIDTAGIRKKSVMFKDK-IEKYGFYRSYDAIRRADIAVGLIDAT 267
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E A E GR +V+ +NK D ++ ++ + K+ KE + ++ + +
Sbjct: 268 EGVTERDVKVIADAYEAGRPVVLAINKWDAIN--KDEKVGKKFKEEIAEKFKF----LNN 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPKI 525
PV+F SAL + + V + Y ++ R+ TS+LN+ L V H ++ + K
Sbjct: 322 PPVIFISALTRKNIFKIFDAVDNLYAEYSKRIQTSKLNKLLEHVQMLHQPPVVKNRRVKF 381
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PP FV F++ ++ + RF+ L+E+F G+P+ ++ R
Sbjct: 382 YYMTQVDIKPPHFVIFVNYPDSVHFSYKRFIVNQLRENFGFKGVPLIVSYR 432
>gi|224106171|ref|XP_002314070.1| predicted protein [Populus trichocarpa]
gi|222850478|gb|EEE88025.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 164/510 (32%), Positives = 253/510 (49%), Gaps = 76/510 (14%)
Query: 114 KIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFK 173
+I +LLP V I+GRPNVGKSALFNRL+ A+V + P VTRD G + G+ F
Sbjct: 1 QIPDHLLPKVAIVGRPNVGKSALFNRLVGGNRAIVVDEPG--VTRDRLYGRSFWGEHEFM 58
Query: 174 VLDSAGLETEATSGS------ILDRTAGMTANVLAKTQFA-------------------- 207
V+D+ G+ T + S + + T GM LA + A
Sbjct: 59 VVDTGGVVTVSKSQANVMEDLAISTTIGMDGIPLASREAAVARMPSMIEKQATAAVEESS 118
Query: 208 --IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLMLG 265
IF++D ++GL D+E+ WLR++ I+A+NKCES G A+E LG
Sbjct: 119 VIIFLVDGQAGLTAADVEIADWLRRNYSNKCIILAVNKCESPRKGIMQ----ASEFWSLG 174
Query: 266 FGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPL 325
F P+ ISA +G G EL D + L N + ++E+ +P
Sbjct: 175 F-SPLPISAISGTGTGELL--------DLVCSRLGKVEVSKNVN--------EEETYIP- 216
Query: 326 QLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHF-EYQGRTVYLVDTAGWLQ 384
+AIVGRPNVGKS++LNAL+ EDR +V P +G TRD++ F G+ L+DTAG +
Sbjct: 217 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFVGPDGQKFLLIDTAGIRR 276
Query: 385 REKEKGPAS----LSVMQSRKNLMRAHVVALVLDA------EEVRAVE----EGRGLVVI 430
R S LSV ++ + + R+ VVALV++A ++ R E EG+G +++
Sbjct: 277 RAAVASSGSVTEALSVNRAFRGIRRSDVVALVIEAMACITEQDYRIAERIEKEGKGCLIV 336
Query: 431 VNKMDLLSGR-QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVID 489
VNK D + + Q +A Y Q+++ + + P+V+++A+ G ++
Sbjct: 337 VNKWDTIPNKNQQTATYYE------QDVREKLRLLHWAPIVYSTAIAGHNVEKIIVAAST 390
Query: 490 TYQKWCLRLPTSRLNRWLRKVMGRH--SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKT 547
++ RL TS LN+ +R+ + + ++ Y TQ RPPTFV F++
Sbjct: 391 VEKERSRRLGTSILNQVVREALAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDSNL 450
Query: 548 LSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ R++ K L+ D G PIR+ RS
Sbjct: 451 FPETYRRYMEKQLRSDAGFSGTPIRLLWRS 480
>gi|16330798|ref|NP_441526.1| GTP-binding protein EngA [Synechocystis sp. PCC 6803]
gi|383322540|ref|YP_005383393.1| hypothetical protein SYNGTI_1631 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325709|ref|YP_005386562.1| hypothetical protein SYNPCCP_1630 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491593|ref|YP_005409269.1| hypothetical protein SYNPCCN_1630 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436860|ref|YP_005651584.1| hypothetical protein SYNGTS_1631 [Synechocystis sp. PCC 6803]
gi|451814956|ref|YP_007451408.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
gi|8928101|sp|P74120.1|DER_SYNY3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|1653291|dbj|BAA18206.1| slr1974 [Synechocystis sp. PCC 6803]
gi|339273892|dbj|BAK50379.1| slr1974 [Synechocystis sp. PCC 6803]
gi|359271859|dbj|BAL29378.1| slr1974 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275029|dbj|BAL32547.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278199|dbj|BAL35716.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961844|dbj|BAM55084.1| GTP-binding protein EngA [Bacillus subtilis BEST7613]
gi|451780925|gb|AGF51894.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
Length = 452
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 245/490 (50%), Gaps = 54/490 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS NRL ++A+V++ P +TRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPG--ITRDRTYRPAFWRDRDFQVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L S L LA+ + AIF++D + G D E+ +WLR+ + + I+
Sbjct: 61 LVFNDDS-EFLPEIREQANLALAEAKAAIFVVDGQQGPTASDEEIAQWLRQQS--VPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G A AAE LG G+P +SA G G +L +AL +Y+
Sbjct: 118 AVNKCESPDQG----AIQAAEFWHLGLGEPYPMSAIHGSGTGDLLDALL----EYL---- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ Q+ PE+DE +++AIVGRPNVGKS+LLNAL E R +V P +G T
Sbjct: 166 --------PAPQE--EPEEDE----IKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD++ + E G+ L+DTAG ++R+K + G + ++ K + RA VV VLD +
Sbjct: 212 RDAIDMVVERNGQKYRLIDTAG-IRRKKNVDYGAEFFGINRAFKAIRRADVVLFVLDVLD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +E+GR +V+++NK D + + + +Y+ +++ + +
Sbjct: 271 GVTEQDLKLAGRIIEDGRAVVLVINKWDAVE-KDSYTIYEH-----REQLMARLYFMDWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKI 525
++F SA G ++ V Q+ R+ T+ +N L + + HS Q Q KI
Sbjct: 325 EMIFVSAQTGLRVQKILDCVDIAAQEHRRRVTTAVINEVLEEAVSWHSPPTTRQGKQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSS 585
Y TQV +PP F++ +D R++ K ++ G PIR+ R +K
Sbjct: 385 YYGTQVSTQPPAIALFVNDPNRFNDNYRRYIEKQFRKQLGFFGSPIRLFWRG--KKVREM 442
Query: 586 SSRQNTGQKV 595
+N KV
Sbjct: 443 EGSRNRATKV 452
>gi|342214776|ref|ZP_08707449.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
gi|341590599|gb|EGS33836.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
Length = 444
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 242/471 (51%), Gaps = 53/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPG--VTRDRIYFDAEWLQREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + + A + + + +F++D + G+ D EV LR KP++
Sbjct: 62 EFITAESHEIPKMMRFQAQLAIEEADVILFVVDGKQGITIADEEVANLLRASG---KPVI 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQ-----EANIYEFYNLGIGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D + S ED+++ + +A++GRPNVGKS+L NALL ++RV+V AG
Sbjct: 159 LDDVVKHFPPQS---ASEEDEDT---IHVALIGRPNVGKSSLTNALLGQERVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + G+ L+DTAG ++ + P S+++S + + R+ +V LVLDA
Sbjct: 213 TRDSIDTHWSHDGQDFVLIDTAGMRRKSRIDAPVERYSIVRSLRAIDRSDIVVLVLDATD 272
Query: 416 ---EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + + E G+GLV++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIVGYAHESGKGLVIVVNKWDLIEKDDKTTL--RFTEDIYDEMGF----LRYA 326
Query: 468 PVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PKI 525
P++F SAL + R+ + ++I ++ +R+ TS LN+ L + + + PKI
Sbjct: 327 PILFASALT-KQRVHRLAELIKYVSEQQHMRISTSVLNQLLSDAQTVNPVPSRGGRIPKI 385
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R
Sbjct: 386 YYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLVLR 436
>gi|59711240|ref|YP_204016.1| GTP-binding protein EngA [Vibrio fischeri ES114]
gi|197336109|ref|YP_002155390.1| GTP-binding protein EngA [Vibrio fischeri MJ11]
gi|81311005|sp|Q5E768.1|DER_VIBF1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238690264|sp|B5FAX6.1|DER_VIBFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|59479341|gb|AAW85128.1| predicted GTP-binding protein [Vibrio fischeri ES114]
gi|197317599|gb|ACH67046.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11]
Length = 500
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 235/494 (47%), Gaps = 70/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKL + F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAKLEEQEFILIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + K LR KP
Sbjct: 59 GID--GTEQGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ +NK + + A+AE LG I+A G G+T L E AL P +M
Sbjct: 114 FLVVNKIDGI-----DADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALAP----FME 164
Query: 297 RVLNDSCTQNNSSTQDVT------------SPEDDESKL------PLQLAIVGRPNVGKS 338
++ +S N D+T + ED E P++LAI+GRPNVGKS
Sbjct: 165 ELVEESLKDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKS 224
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E +G+ L+DTAG +R + + SV+
Sbjct: 225 TLTNRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVI 284
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR LV+ VNK D L
Sbjct: 285 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWD--------GLDN 336
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V E+ + V + F SAL G G + V + Y R+ TS L R +
Sbjct: 337 DVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIM 396
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + K L + RFL
Sbjct: 397 KMAQDDH-------QPPLVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNY 449
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 450 YRKSLEIMGTPIRI 463
>gi|350530365|ref|ZP_08909306.1| GTP-binding protein Der [Vibrio rotiferianus DAT722]
Length = 498
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 239/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTEFEDEELAIEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|374324515|ref|YP_005077644.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
gi|357203524|gb|AET61421.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
Length = 440
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 231/468 (49%), Gaps = 49/468 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+I R ++V + P +TRD G+++ F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKP--GITRDRIYGISEWNGKSFSIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E + IL + + +FM D ++G+ D EV + L + + IVA
Sbjct: 62 EIDGED-EILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPV--IVA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK ++L A E GFGDPIAIS G+G+ +L
Sbjct: 119 VNKVDNLER-----ADLIYEFYSYGFGDPIAISGSHGIGLGDLL---------------- 157
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D+ T N ++ ED +++A++GRPNVGKS+L+NA+L E+RV+V AG TR
Sbjct: 158 DAITSNLPELEEDIYDED-----VIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE-- 417
D++ FE G+ L+DTAG +R K + SVM++ + + RA VV +V++ EE
Sbjct: 213 DAIDTPFEKDGQKYVLIDTAGMRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGI 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
A E G+ + +VNK D++ + K I+ +T P+
Sbjct: 273 IEQDKHIAGYAYEAGKASLFVVNKWDVVDKDDKTMRQFETK------IRDHFLFMTYAPI 326
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKYF 528
VF SA + ++ V Q+ LR+ T LN + + + D+ + +I Y
Sbjct: 327 VFLSAKTKQRLQKLLPVVQHVAQQHVLRIQTHLLNDVISDAVAINPPPTDKGRRLRINYV 386
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPT V F++ + + + R+L ++ F+ G PIRI R
Sbjct: 387 TQVAVKPPTMVVFVNDPEMMHFSYERYLENKIRAAFNFEGTPIRIFTR 434
>gi|209694322|ref|YP_002262250.1| GTP-binding protein EngA [Aliivibrio salmonicida LFI1238]
gi|238058970|sp|B6EGZ1.1|DER_ALISL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|208008273|emb|CAQ78418.1| GTP-binding protein [Aliivibrio salmonicida LFI1238]
Length = 500
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 236/494 (47%), Gaps = 70/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNR+ R R+ALV + P +TRD + G AKL + F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRVTRTRDALVADFPG--LTRDRKYGRAKLEEQEFILIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + K LR KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSSDEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ +NK + + A+AE LG I+A G G+T L E AL P +M
Sbjct: 114 FLVVNKIDGI-----DADAASAEFWQLGMSKVYQIAASHGRGVTSLLELALAP----FME 164
Query: 297 RVLNDSCTQNNSSTQDVT------------SPEDDESKL------PLQLAIVGRPNVGKS 338
++ +S N D+T + ED E P++LAI+GRPNVGKS
Sbjct: 165 ELVEESLRDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVGKS 224
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL+N +L E+RV+V G TRDS+ + E +G+ L+DTAG +R + + SV+
Sbjct: 225 TLINRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVI 284
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR LV+ VNK D L
Sbjct: 285 KTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWD--------GLNN 336
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V E+ + V + F SAL G G + V + Y R+ TS L R +
Sbjct: 337 EVKEKVKSELDRRLGFVDFARLHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRVM 396
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + K L + RFL
Sbjct: 397 KMAQDDH-------QPPMVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNY 449
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 450 FRKSLEIMGTPIRI 463
>gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
Length = 499
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAACHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|297617642|ref|YP_003702801.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
gi|297145479|gb|ADI02236.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
Length = 442
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 245/474 (51%), Gaps = 63/474 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V ++GRPNVGKS LFNR+ R+A+V +TP VTRD A+ F V+D+ G+
Sbjct: 6 VALVGRPNVGKSTLFNRMAGLRKAIVEDTPG--VTRDRIYEQAEWAGREFIVVDTGGIRF 63
Query: 183 EATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-A 240
E G IL + + + + + ++D R G+ P D V LR+ KP+V A
Sbjct: 64 E--EGDILAPEVKKQSELAIEEADVIVMVVDAREGVTPEDEMVAGILRRAN---KPVVLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA---LRPSVEDYMLR 297
NK E G L + LG G+PI +SA G+ EL +A L P E
Sbjct: 119 ANKVEDFKKHLGYL-----DFYRLGLGEPIPVSAIHGMNTDELLDAVIALLPPAE----- 168
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
E+++ +L +++A+VGRPNVGKS+LLN L+ E+RV+V G
Sbjct: 169 -------------------EEEKDELAVRIALVGRPNVGKSSLLNRLIGEERVIVSEIPG 209
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAE 416
TRD++ F Y G L+DTAG ++ + K P SV+++ + + R+ VV ++LDA
Sbjct: 210 TTRDAIDTPFRYGGNRYVLIDTAGIRRKSRIKEPTERYSVLRALRAVERSDVVLIILDAT 269
Query: 417 EVRAVEE-----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E R E+ G+ ++IVNK DL+ ++ K + + +E++ +
Sbjct: 270 E-RVTEQDKKIAGFVHEAGKSNIIIVNKWDLV--KKTERTMKEFDDLIREELKFLAYS-- 324
Query: 466 GIPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-P 523
P+++ SAL G+ R+ + +V+D +++ ++PT+ LN+ LR+ + + +
Sbjct: 325 --PILYISALTGQ-RVKQVIEVVDFVAEQYWRKVPTAELNKVLREAVAVNPPPGGGKKRV 381
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
I Y TQ+K PP+F F++ + L + LR+L +L+E+F G PIR+ R
Sbjct: 382 NIFYITQIKTGPPSFALFVNHPEELHFSYLRYLENTLRENFGFEGTPIRLVLRQ 435
>gi|365108711|ref|ZP_09336570.1| GTPase Der [Citrobacter freundii 4_7_47CFAA]
gi|363640605|gb|EHL80076.1| GTPase Der [Citrobacter freundii 4_7_47CFAA]
Length = 490
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 230/474 (48%), Gaps = 38/474 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L A + LG G+ I+A G G+ L E L P ++D +
Sbjct: 115 LVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQ 169
Query: 298 VLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D Q + PEDD LP++LAIVGRPNVGKSTL N +L EDRV+
Sbjct: 170 EEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 229
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
V G TRDS+ + + R L+DTAG +R K + SV+++ + + A+VV
Sbjct: 230 VYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVM 289
Query: 411 LVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+DA E + ++ GR LV++VNK D L + VKE V + +
Sbjct: 290 LVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQVKETLDFR 341
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H +
Sbjct: 342 LGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVR 401
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 402 GRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|416268570|ref|ZP_11642199.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
gi|320175074|gb|EFW50187.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
Length = 490
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEGAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + +E GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQELSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|365861439|ref|ZP_09401209.1| GTP-binding protein EngA [Streptomyces sp. W007]
gi|364009038|gb|EHM30008.1| GTP-binding protein EngA [Streptomyces sp. W007]
Length = 507
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 235/476 (49%), Gaps = 65/476 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + ++GRPNVGKS L NR+I RREA+V + P VTRD A+ RFKV+D+ G
Sbjct: 69 LPVLAVVGRPNVGKSTLVNRIIGRREAVVQDKPG--VTRDRVSYEAEWAGRRFKVVDTGG 126
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
E + G+ A+V A+ ++AI F++D G D V K LR+
Sbjct: 127 WEQDVL---------GLDASVAAQAEYAIETADAVVFVVDSTVGATDTDEAVVKLLRRAG 177
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
KP+V C + +G A A+A LG G+P +S+ G G ++ +A+
Sbjct: 178 ---KPVVL---CANKVDGQSGEADASA-LWSLGLGEPYPVSSLHGRGTGDMLDAV----- 225
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
L L D+ Q + P ++A++GRPNVGKS+LLN + EDRV+V
Sbjct: 226 ---LEALPDAPAQKFGTALGG----------PRRIALIGRPNVGKSSLLNKVAGEDRVVV 272
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVAL 411
+AG TRD V + G T +DTAG +R ++G + +++ + +A V +
Sbjct: 273 NEQAGTTRDPVDELIKLGGITWKFIDTAGIRRRVHLQEGADYYASLRTAAAVEKAEVAVV 332
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++D+ E AVE GR LVV NK D L + L + EI+T +
Sbjct: 333 LIDSSESISVQDQRIITMAVEAGRALVVAFNKWDTLDEERRYYLER--------EIETEL 384
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q+ P V SAL GR ++ + + W R+PT RLN +L +++ H +
Sbjct: 385 AQIAWAPRVNVSALTGRHMEKLVPAIETAIEGWETRVPTGRLNAFLGEIVASHPHPIRGG 444
Query: 522 -QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
QP+I + TQ +PP FV F SG L RF+ + L+E+F G PI I+ R
Sbjct: 445 KQPRILFGTQAGTKPPRFVLFASG--FLEHGYRRFVERRLREEFGFEGTPIHISVR 498
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQ-LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
Q ++V D+ PL LA+VGRPNVGKSTL+N ++ +V + G+TRD
Sbjct: 47 AAQEGFDPEEVEGALDEAGHGPLPVLAVVGRPNVGKSTLVNRIIGRREAVVQDKPGVTRD 106
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDA-----E 416
V E+ GR +VDT GW Q G + Q+ + A V V+D+ +
Sbjct: 107 RVSYEAEWAGRRFKVVDTGGWEQ--DVLGLDASVAAQAEYAIETADAVVFVVDSTVGATD 164
Query: 417 EVRAV-----EEGRGLVVIVNKMDLLSGRQN-SALY 446
AV G+ +V+ NK+D SG + SAL+
Sbjct: 165 TDEAVVKLLRRAGKPVVLCANKVDGQSGEADASALW 200
>gi|326797802|ref|YP_004315621.1| GTP-binding protein engA [Sphingobacterium sp. 21]
gi|326548566|gb|ADZ76951.1| GTP-binding protein engA [Sphingobacterium sp. 21]
Length = 433
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 233/472 (49%), Gaps = 63/472 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDH--VTRDIREGLAKLGDLRFKVLDSAGL 180
+ I+GRPNVGKS L+NRL R+A+V DD VTRD G A+ F V+D+ G
Sbjct: 5 IAIVGRPNVGKSTLYNRLTESRKAIV----DDMSGVTRDRHYGQAEWVGKTFTVIDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
GS A + VL + A +FM+DV G+ LD ++ LR+ KP
Sbjct: 61 ----VHGSEDIFEAAIREQVLIAIEEASVILFMVDVTVGITDLDDDIAHLLRRSN---KP 113
Query: 238 I-VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ V +NK + H+ L A+ LG G+ IS+ TG G EL
Sbjct: 114 VFVVVNKVD--HH---QLHTDASTFYALGLGEIYNISSMTGSGTGELL------------ 156
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
D ++ Q+ +E LP + AIVGRPNVGKS+ +NAL+ ++R +V P A
Sbjct: 157 ----DEVVKHFDEVQE------EEGSLP-KYAIVGRPNVGKSSFINALIGKERNIVTPIA 205
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA 415
G TRDS+++H+ G L+DTAG ++ K K SVM++ K L A VV L++DA
Sbjct: 206 GTTRDSIQIHYNQFGHEFMLIDTAGLRRKTKVKENIEFYSVMRTIKALEEADVVILMIDA 265
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A + +G+V++VNK DL+ ++ KR +E EI+ T
Sbjct: 266 TEGLESQDVNIFHLAEKNKKGVVLLVNKWDLVD--KDHKTLKRFEE----EIRNKTAPFT 319
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
P+VFTS +E + + Y+ ++ TS+LN + ++ + + K
Sbjct: 320 DYPIVFTSVIEKQRIFKAIEAATKVYENKYKKISTSKLNDVMLPIIENYPPPATKGKYIK 379
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
IKY TQ+ R P F F + + + D RF+ L+E FD G+PI+I R
Sbjct: 380 IKYVTQITGRSPMFAFFCNLPQYIKDPYKRFIENKLREHFDFTGVPIQIFFR 431
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSA 178
LP I+GRPNVGKS+ N LI + +V TP TRD I+ + G F ++D+A
Sbjct: 173 LPKYAIVGRPNVGKSSFINALIGKERNIV--TPIAGTTRDSIQIHYNQFGH-EFMLIDTA 229
Query: 179 GLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEV 224
GL + ++ + M T L + I MID GL D+ +
Sbjct: 230 GLRRKTKVKENIEFYSVMRTIKALEEADVVILMIDATEGLESQDVNI 276
>gi|319941508|ref|ZP_08015835.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
gi|319804982|gb|EFW01821.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
Length = 451
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 241/472 (51%), Gaps = 46/472 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS FNRL R R+A+V + P +TRD + G ++G + V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTFFNRLTRSRDAIVADFPG--LTRDRQYGQGRVGPGPYIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E T G I+ AG + + +F+ D R+GL P D+ + + LR+ +P+
Sbjct: 59 GFEPVRTEG-IVQAMAGQAELAIEEADVVLFLTDARAGLTPQDIRIAQHLRRAD---RPV 114
Query: 239 VAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
V + NK E L A AE LG G+P +S G G+ + +
Sbjct: 115 VLLVNKAEGLTET------AKAEFYELGLGEPHLVSGAHGQGVRDALD------------ 156
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
L SC + + + EDD+ +++ + GRPN GKSTL+NAL+ E+RV+ G
Sbjct: 157 -LAFSCLPEDFPFDEPEAEEDDDGPRRIKVTLAGRPNAGKSTLINALVGEERVIAFDMPG 215
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++++ FEY GR LVDTAG ++ + + SV+++ + + A+VV LV+DA+
Sbjct: 216 TTRDAIKIDFEYDGRPYELVDTAGLRKKGRVFEAVEKFSVVKTLQAIEDANVVILVVDAK 275
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E +E GR LVV VNK DLL Y+R E +++ + +
Sbjct: 276 EGVSEGDAHIAGYVLEAGRALVVAVNKWDLLDS------YER--ERFNLDLERKLHFLRW 327
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPKI 525
++ SAL+ G +M V + + +LPT +L R L + + R + + +PK
Sbjct: 328 ARMIRISALKRNGLNHLMRAVDEAHAAAYAKLPTPKLTRALLEAVQRQQPPRAKGGRPKP 387
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y Q + PP V + + + ++ R+L ++ F+L G P+R+ R+
Sbjct: 388 RYAHQGGSNPPVIVIHGNALEDIGESYRRYLEGYFRDTFNLAGTPLRVEFRT 439
>gi|444426825|ref|ZP_21222229.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239923|gb|ELU51476.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 498
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 239/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESGEGEIEDLTEFEDEELAVEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|261820577|ref|YP_003258683.1| GTP-binding protein EngA [Pectobacterium wasabiae WPP163]
gi|261604590|gb|ACX87076.1| ribosome-associated GTPase EngA [Pectobacterium wasabiae WPP163]
gi|385870753|gb|AFI89273.1| GTP-binding protein engA [Pectobacterium sp. SCC3193]
Length = 495
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 238/483 (49%), Gaps = 51/483 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGHEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+GL P D + K LR +
Sbjct: 59 GID--GTEDGVETRMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSREKMT--V 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L A+ LG G+ AI+A G G+T L E L P V+D +
Sbjct: 115 LVANKTDGLDPDM-----VTADFYSLGMGEVYAIAASHGRGVTSLLETVLLPFVQDEIEE 169
Query: 298 VLNDSCTQNNSS---------------TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLN 342
+ + + N++ +D +PED LP++LAIVGRPNVGKSTL N
Sbjct: 170 PVELTEEEENAAYWAALEAKEQASEEEAEDDFNPED----LPIKLAIVGRPNVGKSTLTN 225
Query: 343 ALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRK 401
+L E+RV+V G TRDS+ + R L+DTAG +R K + SV+++ +
Sbjct: 226 RILGEERVVVYDMPGTTRDSIYIPMVRDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQ 285
Query: 402 NLMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKE 451
+ A+VV LV+DA E + ++ GR LV++VNK D LS + V++
Sbjct: 286 AIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVRD 337
Query: 452 AVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM 511
V + + + + F SAL G G + V++ Y R+ T+ L R ++
Sbjct: 338 QVKDMLDLRLGFIDFARIHFISALHGSGVGNLFESVMEAYSCATRRVSTAMLTRVMQMAA 397
Query: 512 GRHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIP 570
H + + K+KY PP V + K L D+ R+L + ++ G P
Sbjct: 398 DDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLEVMGTP 457
Query: 571 IRI 573
IRI
Sbjct: 458 IRI 460
>gi|398306785|ref|ZP_10510371.1| GTP-binding protein Der [Bacillus vallismortis DV1-F-3]
Length = 436
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 235/470 (50%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNYDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ L + + + IFM++ R G+ D EV K L + KP+V
Sbjct: 62 DI--GDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L +A ++
Sbjct: 117 AVNKLDNTE-----MRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAAAEHFKNI----- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
PE + +Q ++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 167 ----------------PETKYDEEVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y + +VDTAG ++ K + SV+++ K + R+ VVA+VLD EE
Sbjct: 211 RDAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK D + ++ + K +E + Q ++ P
Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVD--KDESTMKEFEENIRDHFQF----LSYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
++F SAL + +M +I + LR+ T+ LN + + + + ++ KI Y
Sbjct: 325 ILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PP+FV F++ + + + RFL +++ FD G PI+I R+
Sbjct: 385 ATQVSVKPPSFVVFVNDPELMHFSYERFLENRIRDAFDFEGTPIKIFARA 434
>gi|398813287|ref|ZP_10571986.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
gi|398038948|gb|EJL32094.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
Length = 437
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 238/472 (50%), Gaps = 55/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS +FNRLI +R A+V + P VTRD G + F V+D+ G
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGQRVAIVEDMPG--VTRDRLYGKGEWLTHTFHVIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E T IL + + + I + D R+G+ D+E+ + L + KP+V
Sbjct: 61 IEFGETD-EILTQMRYQAELAIDEADVIIMIADSRTGVTDADVELSRMLNRTG---KPVV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ++ + + LG G+P +S GLG+ ++ E
Sbjct: 117 LAVNKADN-----PEMRADIYDFYSLGLGEPFPVSGSHGLGLGDMLE------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
Q+ + EDDE K ++++I+GRPNVGKS+L NALL E+RV+V A
Sbjct: 159 ---DVVQHFPA-------EDDEEKRDDVIRVSIIGRPNVGKSSLTNALLGEERVIVSDVA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ FE ++ LVDTAG +R K + SVM++ +++ + VV +V+D
Sbjct: 209 GTTRDAIDTPFERDDQSYILVDTAGMRKRGKVYETTEKYSVMRAMRSIEDSDVVLVVIDG 268
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
EE A E GRG+++IVNK D + ++ +R E + +E + +
Sbjct: 269 EEGIIEQDKKIAGYAHEAGRGVIIIVNKWDAVE--KDDKTMQRFTELIREEFK----YLH 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
P+++ SA + ++ +V + Q +R+PTS LN + R D+ + K
Sbjct: 323 YAPILYVSAKSKQRVHTILPKVNEVSQAHAMRVPTSVLNDLVTDATIRTPPPSDRGKRLK 382
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQ +PPTF+ F++ + + + R++ ++E F G P+RI R
Sbjct: 383 INYTTQATVKPPTFILFVNDPELMHFSYERYIENKIREAFVFEGTPVRIWTR 434
>gi|428307266|ref|YP_007144091.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
gi|428248801|gb|AFZ14581.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
Length = 455
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 243/495 (49%), Gaps = 60/495 (12%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL +A+V++ + VTRD A D + V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTVANRLAGDNDAIVHD--EAGVTRDRTYRPAFWQDRDYIVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L + + L LA+ AIF++D ++GL D E+ +WLR+H I ++
Sbjct: 61 LVFDDDT-EFLPLIREQALAALAEASAAIFVVDGQAGLTTGDQEIAEWLRQHP--IPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---RPSVEDYML 296
A+NKCES G A+E LG G+P +S G G EL E L PSV++
Sbjct: 118 AVNKCESPQQGLVQ----ASEFWSLGLGEPFPMSGIHGNGTGELLEKLVTYLPSVDEIE- 172
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+PE +++AIVGRPNVGKS+LLNAL E+R +V P +
Sbjct: 173 -----------------ETPE-------IKVAIVGRPNVGKSSLLNALTGENRSIVSPIS 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLD 414
G TRD++ E G T L+DTAG ++R+K E G + ++ K + RA VV LV+D
Sbjct: 209 GTTRDAIDSVVERNGTTYRLIDTAG-IRRKKNVEYGSEFFGINRAFKAIRRADVVLLVID 267
Query: 415 AEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+ R EEGR VVI NK D + + + +Y+ I T + V
Sbjct: 268 VLDGVTDQDQKLAGRIAEEGRACVVIANKWDAVE-KDSYTIYEH-----QANITTRLSFV 321
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQ 522
V+FTSAL G+ ++ V ++ R+ T+ +N L + + HS Q Q
Sbjct: 322 EWAEVIFTSALTGQRVDKILGLVNTAAEEHKRRVSTAVINEVLEEAISWHSPTVSRQGRQ 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKC 582
KI Y TQV +PP+ V F++ + +D R++ K ++ G PI++ R +K
Sbjct: 382 GKIYYGTQVSTQPPSIVLFVNDPQRFNDNYRRYIEKQFRQQLGFKGSPIKLMWRG--KKV 439
Query: 583 GSSSSRQNTGQKVGR 597
QN + R
Sbjct: 440 REMEGMQNRSNRATR 454
>gi|420165478|ref|ZP_14672169.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM088]
gi|394235279|gb|EJD80851.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis
NIHLM088]
Length = 436
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 244/475 (51%), Gaps = 58/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERISIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IEEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDNLE-----MRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N ++D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------NKESED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y G+ L+DTAG ++ K + SV+++ K + R+ VV +V+DAE+
Sbjct: 211 RDAIDTEYSYDGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSEVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ + V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTVE--KDSKTMKKFTDDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
+ F SA E R R+ + I+ + R+ +S LN + + + + D+ + +
Sbjct: 325 IAFVSAKE-RLRLKTLFPYINQASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVF 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Y TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 384 YTTQVAIEPPTFVVFVNDVELMHFSYRRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|225389099|ref|ZP_03758823.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
gi|225044833|gb|EEG55079.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
Length = 441
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 238/470 (50%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN L ++V +TP VTRD ++ F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGETISIVKDTP--GVTRDRIYADCSWLNMNFTLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + TS IL + +A +F++DVR GL D +V LRK KP+V
Sbjct: 62 EPD-TSDVILSQMREQAEIAIATADVIVFIVDVRQGLVDADTKVADMLRKSR---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S E LG GDP+ +SA + LG+ +L + V Y
Sbjct: 118 AVNKVDSYEK----FGNDVYEFYNLGIGDPVPVSAASRLGIGDLLD----EVVKYF---- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D E++E + P ++A+VG+PNVGKS+++N LL E+RV+V AG T
Sbjct: 166 ------------DCAKLEEEEDERP-RIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV 418
RD+V + G +DTAG ++ K + S++++ + RA +V +V+DA+E
Sbjct: 213 RDAVDTEIVHDGTPYVFIDTAGLRRKSKIHEELERYSIIRTVTAVERADIVVVVIDAKEG 272
Query: 419 R----------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G++V VNK D + + + +Y+ + +EI + IP
Sbjct: 273 VTEQDAKIAGIAHERGKGIIVAVNKWDAIE-KNDKTIYEYTNKL--KEILSFIPYA---E 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTY-QKWCLRLPTSRLNRWLRKVMG-RHSWKDQSAQPKIK 526
+F SA G+ R+ + +VID Q LR+ T LN + + + + D+ + KI
Sbjct: 327 YLFVSAATGQ-RLPKLFEVIDAVRQNQNLRVSTGVLNEIMAEAVAMQQPPSDKGKRLKIY 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPTFVAF++ K+ + + +R+L ++ F G ++ R
Sbjct: 386 YMTQVAVKPPTFVAFVNDKELMHFSYVRYLENQIRSAFGFRGTSLKFVIR 435
>gi|375091644|ref|ZP_09737933.1| ribosome-associated GTPase EngA [Helcococcus kunzii ATCC 51366]
gi|374563166|gb|EHR34488.1| ribosome-associated GTPase EngA [Helcococcus kunzii ATCC 51366]
Length = 440
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 234/471 (49%), Gaps = 53/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS LFN+L+ +R ++ +TP VTRD + + F ++D+ GL
Sbjct: 4 PIVSIIGRPNVGKSTLFNKLVGKRLSITEDTP--GVTRDRLYSEVEWQNNHFVLVDTGGL 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E T +R + A++ + + +F++D R GL LD + + LR+ ++ +V
Sbjct: 62 ELEYTGD--FNREIEIQADIAIESSDLILFLVDGREGLTSLDELIAEKLRRSGRKV--VV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK ES E LG D ISAE G G+ +L D ++++
Sbjct: 118 VVNKIES-----KDTPLEIYEFYNLGIEDLHVISAEQGYGLGDLL--------DVIVKMF 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D + EDD L +A++G+PNVGKS+ +N L+ E+R +V AG T
Sbjct: 165 PDDSLK---------EVEDDR----LHIAVIGKPNVGKSSFVNMLVGEERAIVSDIAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGW-LQREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RDS+ FE+ G+ +DTAG QR + S +++ + R+ +V +DA E
Sbjct: 212 RDSIDTEFEHNGKKYTFIDTAGLRRQRSIDSRVEKYSTIRTYNAIDRSDIVLFFIDANEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E + +++VNK DL+ N+ + EI+ I P
Sbjct: 272 VTEQDTKIIGYAHNENKASIIVVNKWDLIEKDTNTM------KDFEAEIRNKITFTLYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQK-WCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
+ F S + + RI + +I+ K + R+PT LN LR ++ + K + + KI
Sbjct: 326 IAFISVI-NKQRIDKLFDLIEEVDKNYSFRIPTGTLNTLLRDLILLNPPKSKKGKTLKIY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV RPP F+ +++ ++ + + LR++ L+E+F+ G+PI + R+
Sbjct: 385 YMTQVTTRPPKFLIYVNDEELMHFSYLRYIENKLRENFNFRGVPITLEVRN 435
>gi|422367772|ref|ZP_16448198.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
Length = 499
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 235/477 (49%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 8 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 65
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 66 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 120
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 121 PTFLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDL 175
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 176 APQEEVDEDAEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 235
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TR+S+ + E GR L+DTAG +R K SV+++ + + A+
Sbjct: 236 RVVVYDMPGTTRESIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDAN 295
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 296 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 347
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 348 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 407
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 408 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 464
>gi|432802706|ref|ZP_20036675.1| GTPase Der [Escherichia coli KTE84]
gi|431347848|gb|ELG34725.1| GTPase Der [Escherichia coli KTE84]
Length = 490
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D RSGL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|379011828|ref|YP_005269640.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
gi|375302617|gb|AFA48751.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
Length = 439
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 240/470 (51%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN+L+ R A+V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGERIAIVEDTP--GVTRDRIIADAEWQNHHFTLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E T IL + + + M+D R G+ DLEV +RKH + ++A
Sbjct: 62 EPH-TKDDILLQMRVQAEVAIDMADLIVLMVDGREGMTSSDLEVANMIRKHDKDV--LLA 118
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK +S +L A E LG G+P+AISAE GLG+ +L + + V+ Y
Sbjct: 119 VNKVDS-----RNLENNAYEFYNLGIGEPLAISAEQGLGLGDLLDEIINHVKRYY----- 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D +DD L++A++G+PNVGKSTL+N +L E+R++V G TR
Sbjct: 169 -----------DEEETDDDR----LKVAVIGKPNVGKSTLINKILGEERLIVSDIPGTTR 213
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE--KGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
D+V Y G L+DTAG L+R+K+ + S++++ + R+ VV +++D +
Sbjct: 214 DAVDTSVRYDGEDYVLIDTAG-LRRKKKIYEDIERYSIVRAIAAVERSQVVLVLIDGSQG 272
Query: 418 -------VRAVEEGRGL--VVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
+ + R + ++IVNK D + + N + K + +I+ + + P
Sbjct: 273 VTEQDAKIAGIAHNRSIPSIIIVNKWDAVE-KDNKTMKK-----MEDDIRDALSFMDYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQ-KWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIK 526
++F SA G+ R+ + + I+ + + R+ T ++N L + VM + + K+
Sbjct: 327 IIFISAKTGQ-RLGKIFETIEFVKSQSAKRITTGKVNEALAEFVMMKQPPSKHGRRLKLY 385
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y +QV PPTFV F++ + + R+L L+E FD G PIR R
Sbjct: 386 YASQVAINPPTFVVFVNDTTLVHFSYQRYLENKLRETFDFFGTPIRFFVR 435
>gi|162138394|ref|YP_541823.2| GTP-binding protein EngA [Escherichia coli UTI89]
gi|218559437|ref|YP_002392350.1| GTP-binding protein EngA [Escherichia coli S88]
gi|218690631|ref|YP_002398843.1| GTP-binding protein EngA [Escherichia coli ED1a]
gi|222157217|ref|YP_002557356.1| GTP-binding protein engA [Escherichia coli LF82]
gi|306814419|ref|ZP_07448581.1| GTP-binding protein EngA [Escherichia coli NC101]
gi|386600489|ref|YP_006101995.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
gi|386603449|ref|YP_006109749.1| GTP-binding protein EngA [Escherichia coli UM146]
gi|387617827|ref|YP_006120849.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
gi|417085911|ref|ZP_11953221.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
gi|419947488|ref|ZP_14463834.1| GTP-binding protein EngA [Escherichia coli HM605]
gi|422752149|ref|ZP_16806053.1| ribosome GTPase EngA [Escherichia coli H252]
gi|422755893|ref|ZP_16809717.1| ribosome GTPase EngA [Escherichia coli H263]
gi|422837418|ref|ZP_16885391.1| GTP-binding protein engA [Escherichia coli H397]
gi|432358852|ref|ZP_19602072.1| GTPase Der [Escherichia coli KTE4]
gi|432363610|ref|ZP_19606774.1| GTPase Der [Escherichia coli KTE5]
gi|432382206|ref|ZP_19625149.1| GTPase Der [Escherichia coli KTE15]
gi|432574611|ref|ZP_19811089.1| GTPase Der [Escherichia coli KTE55]
gi|432588793|ref|ZP_19825149.1| GTPase Der [Escherichia coli KTE58]
gi|432598517|ref|ZP_19834791.1| GTPase Der [Escherichia coli KTE62]
gi|432612376|ref|ZP_19848538.1| GTPase Der [Escherichia coli KTE72]
gi|432647039|ref|ZP_19882828.1| GTPase Der [Escherichia coli KTE86]
gi|432656674|ref|ZP_19892377.1| GTPase Der [Escherichia coli KTE93]
gi|432733253|ref|ZP_19968082.1| GTPase Der [Escherichia coli KTE45]
gi|432755345|ref|ZP_19989893.1| GTPase Der [Escherichia coli KTE22]
gi|432760335|ref|ZP_19994829.1| GTPase Der [Escherichia coli KTE46]
gi|432779415|ref|ZP_20013648.1| GTPase Der [Escherichia coli KTE59]
gi|432788417|ref|ZP_20022547.1| GTPase Der [Escherichia coli KTE65]
gi|432821863|ref|ZP_20055554.1| GTPase Der [Escherichia coli KTE118]
gi|432828001|ref|ZP_20061650.1| GTPase Der [Escherichia coli KTE123]
gi|432905840|ref|ZP_20114640.1| GTPase Der [Escherichia coli KTE194]
gi|432938853|ref|ZP_20137096.1| GTPase Der [Escherichia coli KTE183]
gi|432972670|ref|ZP_20161536.1| GTPase Der [Escherichia coli KTE207]
gi|432986227|ref|ZP_20174948.1| GTPase Der [Escherichia coli KTE215]
gi|433005974|ref|ZP_20194402.1| GTPase Der [Escherichia coli KTE227]
gi|433008570|ref|ZP_20196986.1| GTPase Der [Escherichia coli KTE229]
gi|433039516|ref|ZP_20227114.1| GTPase Der [Escherichia coli KTE113]
gi|433083425|ref|ZP_20269881.1| GTPase Der [Escherichia coli KTE133]
gi|433102051|ref|ZP_20288131.1| GTPase Der [Escherichia coli KTE145]
gi|433154592|ref|ZP_20339530.1| GTPase Der [Escherichia coli KTE176]
gi|433164405|ref|ZP_20349140.1| GTPase Der [Escherichia coli KTE179]
gi|433169479|ref|ZP_20354104.1| GTPase Der [Escherichia coli KTE180]
gi|433189251|ref|ZP_20373348.1| GTPase Der [Escherichia coli KTE88]
gi|226741136|sp|B7MHZ6.1|DER_ECO45 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783154|sp|B7MYE6.1|DER_ECO81 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218366206|emb|CAR03954.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli S88]
gi|218428195|emb|CAR09112.2| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli ED1a]
gi|222034222|emb|CAP76963.1| GTP-binding protein engA [Escherichia coli LF82]
gi|294491525|gb|ADE90281.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
gi|305851813|gb|EFM52265.1| GTP-binding protein EngA [Escherichia coli NC101]
gi|307625933|gb|ADN70237.1| GTP-binding protein EngA [Escherichia coli UM146]
gi|312947088|gb|ADR27915.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
gi|323949171|gb|EGB45062.1| ribosome GTPase EngA [Escherichia coli H252]
gi|323955752|gb|EGB51510.1| ribosome GTPase EngA [Escherichia coli H263]
gi|355350889|gb|EHG00084.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
gi|371615234|gb|EHO03662.1| GTP-binding protein engA [Escherichia coli H397]
gi|388410496|gb|EIL70720.1| GTP-binding protein EngA [Escherichia coli HM605]
gi|430876272|gb|ELB99791.1| GTPase Der [Escherichia coli KTE4]
gi|430885815|gb|ELC08685.1| GTPase Der [Escherichia coli KTE5]
gi|430907681|gb|ELC29179.1| GTPase Der [Escherichia coli KTE15]
gi|431107058|gb|ELE11246.1| GTPase Der [Escherichia coli KTE55]
gi|431121126|gb|ELE24124.1| GTPase Der [Escherichia coli KTE58]
gi|431130030|gb|ELE32139.1| GTPase Der [Escherichia coli KTE62]
gi|431148550|gb|ELE49841.1| GTPase Der [Escherichia coli KTE72]
gi|431179694|gb|ELE79586.1| GTPase Der [Escherichia coli KTE86]
gi|431190540|gb|ELE89939.1| GTPase Der [Escherichia coli KTE93]
gi|431274462|gb|ELF65519.1| GTPase Der [Escherichia coli KTE45]
gi|431301775|gb|ELF90976.1| GTPase Der [Escherichia coli KTE22]
gi|431307989|gb|ELF96279.1| GTPase Der [Escherichia coli KTE46]
gi|431326231|gb|ELG13593.1| GTPase Der [Escherichia coli KTE59]
gi|431336612|gb|ELG23720.1| GTPase Der [Escherichia coli KTE65]
gi|431367515|gb|ELG53992.1| GTPase Der [Escherichia coli KTE118]
gi|431371489|gb|ELG57198.1| GTPase Der [Escherichia coli KTE123]
gi|431431911|gb|ELH13685.1| GTPase Der [Escherichia coli KTE194]
gi|431462839|gb|ELH43046.1| GTPase Der [Escherichia coli KTE183]
gi|431480808|gb|ELH60524.1| GTPase Der [Escherichia coli KTE207]
gi|431499121|gb|ELH78302.1| GTPase Der [Escherichia coli KTE215]
gi|431513672|gb|ELH91754.1| GTPase Der [Escherichia coli KTE227]
gi|431523185|gb|ELI00329.1| GTPase Der [Escherichia coli KTE229]
gi|431550628|gb|ELI24617.1| GTPase Der [Escherichia coli KTE113]
gi|431601549|gb|ELI71065.1| GTPase Der [Escherichia coli KTE133]
gi|431618330|gb|ELI87304.1| GTPase Der [Escherichia coli KTE145]
gi|431673114|gb|ELJ39344.1| GTPase Der [Escherichia coli KTE176]
gi|431686680|gb|ELJ52240.1| GTPase Der [Escherichia coli KTE179]
gi|431686827|gb|ELJ52383.1| GTPase Der [Escherichia coli KTE180]
gi|431705168|gb|ELJ69766.1| GTPase Der [Escherichia coli KTE88]
Length = 490
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D RSGL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|453050931|gb|EME98453.1| GTP-binding protein Der [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 486
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 232/476 (48%), Gaps = 65/476 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + ++GRPNVGKS L NR+I RREA+V + P VTRD A+ RFKV+D+ G
Sbjct: 48 LPVLAVVGRPNVGKSTLVNRIIGRREAVVEDRPG--VTRDRVTYEAEWAGRRFKVVDTGG 105
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
E + G+ A+V A+ +FAI F++D G D V K LR+
Sbjct: 106 WEQDVL---------GIDASVAAQAEFAIEAADAVVFVVDSSVGATDTDEAVVKLLRRAG 156
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
KP+V C + +G A A A LG G+P +SA G G ++
Sbjct: 157 ---KPVVL---CANKVDGPSGEADATA-LWSLGLGEPHPVSALHGRGTGDML-------- 201
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D +L L ++ Q + P ++A+VGRPNVGKS+LLN + E+RV+V
Sbjct: 202 DAVLEALPEAPAQTFGTA----------VGGPRRIALVGRPNVGKSSLLNRVAGEERVVV 251
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVAL 411
AG TRD V E G+T VDTAG +R ++G + +++ + +A + +
Sbjct: 252 NELAGTTRDPVDELVELGGKTWKFVDTAGIRRRVHLQEGADYYASLRTAAAVEKAELAVV 311
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA E AVE GR LV+ +NK D L + L + EI+T +
Sbjct: 312 LIDASESISVQDQRIVTMAVEAGRALVLAINKWDTLDEERRFYLER--------EIETEL 363
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
Q+ P V SA GR ++ + W R+PT RLN +L +++ H +
Sbjct: 364 GQIGWAPRVNVSAKTGRHMEKLVPAMETALAGWETRVPTGRLNAFLGELVAAHPHPIRGG 423
Query: 522 -QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
QP+I + TQ RPP FV F SG L RF+ + L+E+F G PI I+ R
Sbjct: 424 KQPRILFGTQAGTRPPRFVLFASG--FLEAGYRRFVERRLREEFGFEGTPIHISVR 477
>gi|78186288|ref|YP_374331.1| GTP-binding protein EngA [Chlorobium luteolum DSM 273]
gi|123583448|sp|Q3B5U3.1|DER_PELLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78166190|gb|ABB23288.1| Small GTP-binding protein domain [Chlorobium luteolum DSM 273]
Length = 436
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 235/469 (50%), Gaps = 56/469 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + ++GRPNVGKS LFNR++R + A+V TP VTRD F+++D+ G
Sbjct: 3 PLIALVGRPNVGKSTLFNRILREKAAIVDPTP--GVTRDRHIAEGHWQGREFRLMDTGGY 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-V 239
E G I T + IF+ DVRSG+ DLE+ K L++ KPI +
Sbjct: 61 APE--DGVISTAMLEQTMMAIQDADIIIFLADVRSGVSYDDLELAKILKRDFSD-KPIFL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ES LA AA + GF +P AISA G G+ +L + +
Sbjct: 118 AVNKAESPQ-----LAIEAASFVSTGFTEPWAISARDGSGVADLLDEIL----------- 161
Query: 300 NDSCTQNNSSTQDVTSPEDD---ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+T PE D E ++LA++GRPNVGKS+ +NALL +R +V
Sbjct: 162 -------------LTFPESDGPPEEDGAIRLAVIGRPNVGKSSFVNALLGSNRQIVSSIP 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ F + + L+DTAG +R K G S ++S + + R V ++LDA
Sbjct: 209 GTTRDAIDTRFTRKQQEFMLIDTAGLRKRTKISAGIEYYSSLRSERAIERCEVAIVMLDA 268
Query: 416 ------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
++++ A E RG++++VNK DL+ ++S K+ +E+ +++ + ++
Sbjct: 269 TPGIEKQDLKIINIAAERKRGVLLLVNKWDLVE--KDSKTSKQYEES----LRSHMGNLS 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM-GRHSWKDQSAQPK 524
IPV+FTSAL + + + Q ++ TS LNR+L + + H + K
Sbjct: 323 YIPVIFTSALTKKNLYRAIDTAKEISQNRSRKISTSALNRFLEEALAANHPSTRTGKELK 382
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
IKY TQ++A P F F + + + +FL L+E F L G+ I +
Sbjct: 383 IKYMTQIEAPWPVFAFFCNNPELVQTNFRKFLENKLREKFSLEGVTISL 431
>gi|388601634|ref|ZP_10160030.1| GTP-binding protein Der [Vibrio campbellii DS40M4]
Length = 498
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 239/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTEFEDEELAVEDYTEEEAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|422333543|ref|ZP_16414553.1| GTPase Der [Escherichia coli 4_1_47FAA]
gi|373245514|gb|EHP64982.1| GTPase Der [Escherichia coli 4_1_47FAA]
Length = 490
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R ++ + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMKMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|414160851|ref|ZP_11417114.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876530|gb|EKS24428.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
Length = 436
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 242/477 (50%), Gaps = 62/477 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDTP--GVTRDRIYSSGEWLTHDFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++ R GL D + + L K KP+V
Sbjct: 62 ELSDAPFQTQIRAQAEVA--IDEADVIIFMVNQREGLTQTDEMIAQMLYKTN---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L
Sbjct: 117 AVNKVDN-----PEMRADIYDFYALGFGEPFPISGSHGLGLGDLL--------------- 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D ++ D ED ++L+++GRPNVGKS+L+NA+L EDRV+V AG T
Sbjct: 157 -DEVAKHFKDEGDDLYDED-----TIRLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y+G+ L+DTAG ++ K + SV+++ K + R++VV +VLDAEE
Sbjct: 211 RDAIDTEYSYEGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVLDAEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D L ++S K+ ++ V + Q + P
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTLE--KDSKTMKKFEDEVRKNFQF----LDYAP 324
Query: 469 VVFTSALEG---RGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPK 524
+ F SA E R ++++ + ++K R+ +S LN + + + + D+ + K
Sbjct: 325 IAFVSAKEKQRLRTLFPLINEASENHKK---RVQSSTLNEVITDAIAMNPTPTDKGRRLK 381
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
+ Y TQV PPTFV F++ ++ + + R+L +++ F G PI+I +PRK
Sbjct: 382 VFYATQVAIEPPTFVVFVNDEELMHFSYKRYLENQIRDAFGFEGTPIKI----IPRK 434
>gi|227879096|ref|ZP_03996985.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256843085|ref|ZP_05548573.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256850263|ref|ZP_05555692.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|262046345|ref|ZP_06019307.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|293379768|ref|ZP_06625900.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|312977269|ref|ZP_07789017.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|423318777|ref|ZP_17296654.1| GTPase Der [Lactobacillus crispatus FB049-03]
gi|227861337|gb|EEJ68967.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256614505|gb|EEU19706.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256712900|gb|EEU27892.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|260573216|gb|EEX29774.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|290923677|gb|EFE00548.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|310895700|gb|EFQ44766.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|405591864|gb|EKB65323.1| GTPase Der [Lactobacillus crispatus FB049-03]
Length = 435
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 240/478 (50%), Gaps = 61/478 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+G+PNVGKS LFNR+I +R A+V + P VTRD A+ +F ++D+
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKP--GVTRDRNYAQAEWMGHKFDLIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ E G I + + + + + +V + + LD + L + KP+
Sbjct: 60 GITWEG--GKIEEEIRAQAEIAIEEADVIVMLTNVVNHVTDLDERIAHLLYRTK---KPV 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK ++ + + LG GDPI +S+ G G+ +L + +
Sbjct: 115 ILAVNKADNPEQRSD-----IYDFYSLGLGDPIPVSSSHGTGIGDLLD-----------Q 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ND ++ DV S +++GRPNVGKS+++N LL EDRV+V E G
Sbjct: 159 IVNDFPDDKDTEADDVIS-----------FSVIGRPNVGKSSIVNKLLGEDRVIVANEEG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F + G +VDTAG +R K + SVM++ + R+ VV LVLDA
Sbjct: 208 TTRDAVDTPFTHDGVKFKVVDTAGIRRRGKVYEKTEKYSVMRAMSAIERSDVVLLVLDAS 267
Query: 416 ----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E+ + V E GRG++++VNK DL ++NS K + + E Q +
Sbjct: 268 TGIREQDKHVAGYAHEAGRGIIIVVNKWDL--PKKNSTSAKEFEREIRDEFQ----YLDY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL---RKVMGRHSWKDQSAQP 523
P++F SA G+ + + V + Y R+ +S LN L K++ K +
Sbjct: 322 APILFVSAKTGQRLDQIPNMVKEVYDNQNQRIQSSVLNDLLLEASKLVPTPMVKGKRL-- 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y TQV PPTFV F++ + + + RFL L+++FD G PI+I +PRK
Sbjct: 380 RVYYMTQVSTNPPTFVVFVNDPELMHFSYERFLINQLRQNFDFTGTPIKI----LPRK 433
>gi|339483558|ref|YP_004695344.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
gi|338805703|gb|AEJ01945.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
Length = 465
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 232/465 (49%), Gaps = 51/465 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
PT++++GRPNVGKS LFNRL R R+A+V + P +TRD G ++G+ + V+D+ G
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRTRDAIVADIPG--LTRDRHYGQGRIGEKPYLVMDTGGF 60
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
E G IL A T + + +F++D R G+ D + + LRK +I ++
Sbjct: 61 EPVVKEG-ILHAMAKQTLQAIDEADKVLFIVDGRQGVTAHDKIIAEQLRKSGQKI--LLV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
+NK E + + A AE LG GDP A+SA G + EL DY L
Sbjct: 118 VNKTEGM-----ATAVVTAEFYELGLGDPCAVSAIHGDNIKEL--------ADYALADFP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D E ESK P ++AIVGRPNVGKSTL+N LL E+RV+ + G TR
Sbjct: 165 D------------VEEEPLESKYP-KIAIVGRPNVGKSTLINTLLGEERVIAFDQPGTTR 211
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVR 419
DS+ + F ++ + L+DTAG +R + SV+++ + + A+V L+LDA+
Sbjct: 212 DSIYIDFAHKDKHYTLIDTAGLRRRGHVFETIEKFSVIKTLQAIEDANVAVLILDAKNEI 271
Query: 420 A----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+ +E GR LV+ VNK D L Q ++ + +E+ + ++ +
Sbjct: 272 SDQDAHIAGFILETGRALVIAVNKWDGLDEYQ--------RDTIKRELTRKLAFLSFAQL 323
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKYF 528
+ SAL G G ++ + Y L T +L R L + +H + ++PK++Y
Sbjct: 324 HYISALHGSGMKNLLPSIDQAYAAAMADLSTPKLTRALIAAIEKHPPPRGGMSRPKMRYA 383
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
Q + PP + + + + R+L + +E F L G P+R+
Sbjct: 384 HQGGSNPPLIIVHGTMLNHVPETYRRYLENTFREVFKLKGTPLRV 428
>gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|424045074|ref|ZP_17782641.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|408886928|gb|EKM25578.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
Length = 498
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 252/525 (48%), Gaps = 81/525 (15%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTEFEDEELAVEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NDVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGRTFSDKR 603
++ ++ G PIRI ++ S + +N G K+ T S +R
Sbjct: 448 YFRKSLEIMGTPIRINFQN------SDNPYENRGGKL--TLSQER 484
>gi|271501567|ref|YP_003334593.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586]
gi|270345122|gb|ACZ77887.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586]
Length = 498
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 233/482 (48%), Gaps = 46/482 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGRAEVEGNEFIIIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +F++D R GL P D + + LR +
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPADYAIAQHLRSR--EKDTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + + TG A+ LG GD I+A G G+T L E L P + +
Sbjct: 115 LVANKVDGIDIDTG-----IADFYSLGLGDVYPIAASHGRGVTSLLEKVLLPFATEPLQE 169
Query: 298 VLNDSCTQNNSST--------------QDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNA 343
+ + N++ DV + LP++LAIVGRPNVGKSTL N
Sbjct: 170 ARELTEEEANAAYWAEQLGEGDDGIEGDDVDDEAPNFEGLPIKLAIVGRPNVGKSTLTNR 229
Query: 344 LLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKN 402
+L EDRV+V G TRDS+ + E GR L+DTAG +R K SV+++ +
Sbjct: 230 ILGEDRVVVYDMPGTTRDSIYIPMERDGRDYVLIDTAGVRKRGKITDTVEKFSVIKTLQA 289
Query: 403 LMRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEA 452
+ A+VV LV+DA E + ++ GR LV++VNK D L + VK+
Sbjct: 290 IEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKDQ 341
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
V + + + + + F SAL G G + V + Y+ R+ T+ L R ++ +
Sbjct: 342 VKETLDLRLGFIDFARIHFISALHGSGVGNLFESVNEAYECSTRRVGTAMLTRIMQMAVD 401
Query: 513 RHSWK-DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
H + + K+KY PP V + K L D+ R+L + D+ G PI
Sbjct: 402 DHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVMGTPI 461
Query: 572 RI 573
RI
Sbjct: 462 RI 463
>gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
Length = 493
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 237/494 (47%), Gaps = 75/494 (15%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGHAQLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + K LR+ KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG D I+A G G+T L + AL P E
Sbjct: 114 MLVVNKVDGIDPD-----AASADFWQLGVEDMYQIAAAHGRGVTALIDLALNPFAE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGKS 338
+ D+T ED+E++ P++LAI+GRPNVGKS
Sbjct: 165 -----ALKAEQGKISDLTEFEDEEAEQVDFTEEEAEQEFKRLQDQPIKLAIIGRPNVGKS 219
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + R L+DTAG +R+ + SV+
Sbjct: 220 TLTNRILGEERVVVYDMPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVV 279
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 280 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDN 331
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 332 DVKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 391
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + + L D+ RFL
Sbjct: 392 KMATDDH-------QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVRDLPDSYKRFLMNY 444
Query: 560 LKEDFDLGGIPIRI 573
+ ++ G PIRI
Sbjct: 445 YRRSLEIMGTPIRI 458
>gi|116749242|ref|YP_845929.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB]
gi|189037168|sp|A0LJ92.1|DER_SYNFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116698306|gb|ABK17494.1| small GTP-binding protein [Syntrophobacter fumaroxidans MPOB]
Length = 446
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 239/481 (49%), Gaps = 50/481 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+ V I+GRPNVGKS LFNR+ + ALV + P VTRD D F ++D+AG
Sbjct: 1 MTVVAIVGRPNVGKSTLFNRISKDNSALVDDLPG--VTRDRNYARVSWNDKPFVIIDTAG 58
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ TS + + T L + +F+ D ++GLHP D E+ LR+ + KP+
Sbjct: 59 FVGQDTS-AFEELTREQILLALDEADILLFVADAKTGLHPGDAELADLLRRSS---KPVF 114
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK + AAE LG ISA G G++EL
Sbjct: 115 YAVNKIDGSEQRR-----HAAEFFELGLDRIYPISAAHGFGISEL--------------- 154
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
++D C + + E++ES ++++I+GRPNVGKSTL+N LL RV+V P G
Sbjct: 155 MDDLCAAIPEAP--AQTAEEEESGGAIRVSILGRPNVGKSTLVNHLLGAPRVIVSPVPGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQ--REKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD+V H G+ L+DTAG + R +EK +S++++ +++ R+HVV L+LDA
Sbjct: 213 TRDAVDSHIVKAGQEYVLIDTAGIRRKGRTREK-LEKISIIKALQSVERSHVVVLLLDAV 271
Query: 417 E----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E E R +V +NK D + ++ KR + + + +T
Sbjct: 272 EGVTDQDLHIAGYIKERSRACIVGINKWD--AADKDPKRTKRFMDDLHDRFRF----LTY 325
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQPKIK 526
PV+ SAL GR ++ V + ++++ R+ T +NR L + + RH + ++K
Sbjct: 326 APVLTFSALTGRNVARLLPTVKEVFRQYNQRVTTGIVNRALEETLARHEPPQAGNRRRLK 385
Query: 527 YF--TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGS 584
++ TQ RPPTFV F + + + + R+LT +E F L PIR+ R R G+
Sbjct: 386 FYYATQTAVRPPTFVLFCNYPQAIHFSYERYLTNRFREAFGLDKTPIRLIFRPRQRTGGT 445
Query: 585 S 585
S
Sbjct: 446 S 446
>gi|424032156|ref|ZP_17771576.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|424042347|ref|ZP_17780087.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
gi|408876161|gb|EKM15290.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|408889698|gb|EKM28043.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
Length = 498
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 239/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTEFEDEELAIEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVIHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|422343693|ref|ZP_16424620.1| ribosome-associated GTPase EngA [Selenomonas noxia F0398]
gi|355378109|gb|EHG25300.1| ribosome-associated GTPase EngA [Selenomonas noxia F0398]
Length = 441
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 236/470 (50%), Gaps = 50/470 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN++ ++R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRISIVDDMP--GVTRDRIYMDAEWLNHEFIMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + S IL + + +F++D R+GL D EV + LR+ KP++
Sbjct: 62 EFDE-SDHILRSMRSQAELAIEEADVILFLVDGRAGLTSSDEEVARILRRTQ---KPVIL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK +S + LG GDPI ISA + + +L + +
Sbjct: 118 AVNKIDSFDR-----EALIYDFYALGLGDPIPISASNAMNLGDLLDMV------------ 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+ ++ D S E + +A+VGRPNVGKS+L+N LL EDRV+V G T
Sbjct: 161 --AAAFPRATDADAESDE-------IAIAVVGRPNVGKSSLVNRLLGEDRVIVSDVPGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ HF G L+DTAG ++ K P SVM+S + + RA VV +V++A E
Sbjct: 212 RDAIDTHFTRDGVKYLLIDTAGMRRKGKITLPVERYSVMRSLRAIDRAGVVLMVINAAEG 271
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E G+G++++VNK D+ + + + + E++ + + P
Sbjct: 272 ILEQDTKIAGYVHESGKGVIIVVNKWDIFPDKNDKSTLR-----FTDELRDKLGFLQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+++TSAL G+ V V ++ +R+ TS LN +R + + + Q KI +
Sbjct: 327 ILYTSALTGQRIERVTELVKYVAEQQSMRIKTSVLNELIRDAVSVNPPPTKKGKQLKILF 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV PPTF+ F++ + + + LRFL L+E F G P+R+ R+
Sbjct: 387 VTQVSIIPPTFIIFVNDPELMHFSYLRFLENRLRESFGFEGTPLRLIVRA 436
>gi|322421095|ref|YP_004200318.1| ribosome-associated GTPase EngA [Geobacter sp. M18]
gi|320127482|gb|ADW15042.1| ribosome-associated GTPase EngA [Geobacter sp. M18]
Length = 440
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 229/475 (48%), Gaps = 49/475 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+ P + I+GRPNVGKS LFNRL+ RR+A+V + P VTRD DL F ++D+
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMP--GVTRDRNYAEVTRFDLPFILVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G E E TS +L + + + + +F++D R GL P D +V LR+ + I
Sbjct: 59 GFEPE-TSDKLLQQMREQSRFAMDEADLILFVMDARDGLTPADRDVVDMLRRINKPVFYI 117
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ E +G LG ISAE G+ +L + + ++
Sbjct: 118 INKVDGEKQEANSGDFYS-------LGVDQIHTISAEHNRGVGDLMDEVLAALP------ 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ E +E + ++A+VGRPNVGKSTL+N LL +RV+ P AG
Sbjct: 165 ---------------YNREKEEDEEITRIAVVGRPNVGKSTLVNRLLGYERVVANPTAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD+V F + L+DTAG ++ K + SVM + +++ RA VV +VL+AEE
Sbjct: 210 TRDAVDTRFTVNKKPYLLIDTAGIRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEE 269
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GRG + +VNK D + + NS + K +EI+ +
Sbjct: 270 GVTEQDTKIAGYAYEAGRGCIFVVNKWDTVQ-KDNSTIGK-----FTEEIRRNFKYLPFA 323
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR-HSWKDQSAQPKIK 526
P++F SA G+ ++ +V +++C R+ T LNR + + H+ D + K
Sbjct: 324 PILFISAETGQRTGKIIAEVDQVMEQYCKRVTTGELNRIFNQAVDENHAPLDGGKRVKFY 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Y TQV +PP+F F + + + + R++ +E F G P+++ R +K
Sbjct: 384 YATQVAVKPPSFAIFTNRPEGIHFSYERYIMNRFREAFGFSGTPLKLLFRGRDKK 438
>gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01]
gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01]
Length = 498
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 239/496 (48%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFP--GLTRDRKYGQARLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTEFEDEELTVEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRDLPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus
oceani ATCC 19707]
gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27]
gi|123757906|sp|Q3JCW1.1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707]
gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27]
Length = 464
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 231/474 (48%), Gaps = 62/474 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG-LE 181
V ++GRPNVGKS LFNRL R R+ALV + P VTRD + GLA G+ F V+D+ G +E
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVVDQPG--VTRDRKYGLAHYGEQSFFVVDTGGVME 62
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E+ G ++ A + + + F++D R GL LD E+ WLR +K ++
Sbjct: 63 QESGIGRLMRAQAQLA---IEEADVIFFLVDGREGLSSLDEEIAAWLRCAQKPLKLVI-- 117
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G L A+E LG G+PI ISA+ G G+
Sbjct: 118 NKAEGR---DGDLV--ASEFYRLGLGEPIIISAQQGQGVGR------------------- 153
Query: 302 SCTQNNSSTQDVTSPEDDESKLP-LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + V E+ E + LQ A++GRPNVGKSTL+N +L E+RVL G TR
Sbjct: 154 -LLEALLTLLPVLEREESEIQAKGLQFAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTR 212
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-----EKGPASLSVMQSRKNLMRAHVVALVLDA 415
DS+ + F + G+ LVDTAG +R + EK SV+QS +++ A VV LV+DA
Sbjct: 213 DSISIPFRHHGKDYTLVDTAGIRRRSRILDKVEK----FSVIQSLQSIAIAQVVILVIDA 268
Query: 416 EEVRA----------VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ +E G+G+V+ VNK D L Q ++ V ++ +P +
Sbjct: 269 HDSVVEQDLHLAGVILESGKGVVIAVNKWDGLPLEQ--------RQRVKTDLDRRLPFLV 320
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQSAQPK 524
+ F SAL G G + + + YQ LPT LNR L + ++ + + K
Sbjct: 321 FARIHFISALHGSGVGDLFPSIDEAYQSANSHLPTGELNRALLAAVEKYPPPVVKGRRIK 380
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSV 578
++Y Q PP + + + +S R+L + F L G PI + R+V
Sbjct: 381 LRYAHQGGQNPPKIIIHGNQAEAVSANYRRYLINYFRNAFGLMGTPIALEFRTV 434
>gi|420381495|ref|ZP_14880942.1| GTPase Der [Shigella dysenteriae 225-75]
gi|391299814|gb|EIQ57753.1| GTPase Der [Shigella dysenteriae 225-75]
Length = 490
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + +E GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQELSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|386810989|ref|ZP_10098215.1| GTP-binding protein [planctomycete KSU-1]
gi|386405713|dbj|GAB61096.1| GTP-binding protein [planctomycete KSU-1]
Length = 444
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 236/475 (49%), Gaps = 57/475 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++PTV I+GRPNVGKS+L N L +RR ++V P VTRD + D F+++D+
Sbjct: 2 IIPTVTIVGRPNVGKSSLLNCLAKRRISIV--EPTSGVTRDRVSTEIQYNDYVFELVDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ + G D + + K +F++D+R G+ PLD+ V + LR+ ++ I
Sbjct: 60 GMGVKDVDGLTEDIELQIEIAI-HKADIILFVVDIREGVMPLDIMVVEKLRRLNKKV--I 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK + T L A+ LG G+ + ISA G G R ++ D ++ +
Sbjct: 117 LVANKVD-----TPKLEYLIADFNKLGLGEAVPISALEGFG--------RSALLDRIISL 163
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L Q + ++LAIVG+ N GKSTL+N L +E R++V AG
Sbjct: 164 LPALPHQEAVPADSI-----------IKLAIVGKRNAGKSTLINTLAKEKRMIVSEVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDA-- 415
TRDSV V FE GR +DTAG ++ + K S+ ++ +++ RA VV ++DA
Sbjct: 213 TRDSVDVRFETGGRQFLAIDTAGVRKKRQVKDSIEFYSMARAERSIRRADVVLFLIDATL 272
Query: 416 --EEV------RAVEEGRGLVVIVNKMDLLSG----RQNSALYKRVKEAVPQEIQTVIPQ 463
EV + E + ++++NK DL+ G R N+ +YK +P
Sbjct: 273 KVSEVDKKLGDYIISESKPCIIVINKWDLVHGVETERFNNYIYK------------CLPG 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQ 522
++ P++F SA + + I ++ + Y++ R+ TS LN+ L + + H + ++
Sbjct: 321 LSFAPIIFISAKDNKHVIEMVQLATELYEQTNTRISTSELNQALEEALSLHRPTRKKAKS 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
P+I Y TQV PPTF+ F++ K R+L+ L+ IP++ R+
Sbjct: 381 PRIYYATQVSVAPPTFILFVNDPKLFDSDYERYLSNQLRSKLPFSEIPLKFRFRA 435
>gi|157692783|ref|YP_001487245.1| GTP-binding protein EngA [Bacillus pumilus SAFR-032]
gi|166920097|sp|A8FEL8.1|DER_BACP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157681541|gb|ABV62685.1| GTPase [Bacillus pumilus SAFR-032]
Length = 436
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 231/470 (49%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNYDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ L + + + IFM++ R G+ D EV K L + KP+V
Sbjct: 62 DI--GDEPFLAQIRHQAEIAMDEADVIIFMVNGRDGVTSADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L +A+ ++
Sbjct: 117 AVNKLDN-----PEMRSDVYDFYALGFGEPYPISGTHGLGLGDLLDAVAEHFKNL----- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
P+ + +Q ++GRPNVGKS+L+NA+L EDRV+V AG T
Sbjct: 167 ----------------PDTQYDEQVVQFCLIGRPNVGKSSLVNAMLGEDRVIVSNIAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y R +VDTAG ++ K + SV+++ K + R+ VVA+VLD EE
Sbjct: 211 RDAVDTMFAYNQRDFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSDVVAVVLDGEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK D + + R + Q I+ + P
Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVEKDE------RTMKEFEQNIREHFQFLDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
V+F SAL + +M +I + +R+ T+ LN + + + + Q KI Y
Sbjct: 325 VLFMSALTKKRIHTLMPSIITASENHAMRVQTNILNDIIMDAVAMNPTPTHNGQRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PP+FV F++ + + + RFL +++ F G PI+I R+
Sbjct: 385 ATQVAIKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARA 434
>gi|417950299|ref|ZP_12593423.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
gi|342806778|gb|EGU41990.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
Length = 493
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 237/494 (47%), Gaps = 75/494 (15%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A+LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGHAQLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + K LR+ KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG D I+A G G+T L + AL P E
Sbjct: 114 MLVVNKVDGIDPD-----AASADFWQLGVEDMYQIAAAHGRGVTALIDLALNPFAE---- 164
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGKS 338
+ D+T ED+E++ P++LAI+GRPNVGKS
Sbjct: 165 -----ALKAEQGEISDLTEFEDEEAEQVDFTEEEAEQEFKRLQDQPIKLAIIGRPNVGKS 219
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + R L+DTAG +R+ + SV+
Sbjct: 220 TLTNRILGEERVVVYDMPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVV 279
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 280 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDN 331
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 332 DVKERVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 391
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + + L D+ RFL
Sbjct: 392 KMATDDH-------QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVRDLPDSYKRFLMNY 444
Query: 560 LKEDFDLGGIPIRI 573
+ ++ G PIRI
Sbjct: 445 YRRSLEIMGTPIRI 458
>gi|220906981|ref|YP_002482292.1| GTP-binding protein EngA [Cyanothece sp. PCC 7425]
gi|254783149|sp|B8HQE1.1|DER_CYAP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219863592|gb|ACL43931.1| small GTP-binding protein [Cyanothece sp. PCC 7425]
Length = 453
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 227/470 (48%), Gaps = 49/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS L NRL R A+V++ P VTRD + D F V+D+ G
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPG--VTRDRTYRPSFWQDRDFLVVDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
L A L L++ + AI ++D + G+ D E+ +WLR+ + + +V
Sbjct: 61 L-VFADDTEFLPLIRQQVVTALSEARVAILVVDGQQGITAADEEIAQWLRQQS--LPVLV 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AE LG G+P ISA G G EL + V Y+
Sbjct: 118 AVNKCESPQQGLAQ----GAEFWELGLGEPFPISAIHGNGTGELLD----QVVSYL---- 165
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T + +D+ + +AIVGRPNVGKS+LLNA++ E R +V P +G T
Sbjct: 166 --PPTDQQAGEEDI-----------INVAIVGRPNVGKSSLLNAVVGEQRAIVSPISGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWL-QREKEKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ E G+ L+DTAG Q+ + GP + ++ K + RA VV LVLDA +
Sbjct: 213 RDAIDTLVERDGQRYRLIDTAGIRKQKNVDYGPEFFGINRAFKAIQRAEVVLLVLDALDG 272
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
R V+EG V++VNK D + + + +Y +++ + +
Sbjct: 273 VTEQDQKLAGRIVDEGCACVIVVNKWDAVE-KDSYTIYD-----YQHQVEQRLNFIGWSD 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQPKIK 526
+F SA G+ + +V ++ R+ TS +N L +G HS Q Q KI
Sbjct: 327 HIFISAATGQRVEKIFERVHLAAEQHRRRVSTSVINEVLEDAVGWHSPPASRQGRQGKIY 386
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV ++PPT F++ D +++ ++ G PIR+ R
Sbjct: 387 YGTQVSSQPPTIALFVNDPALFKDNYRKYIEGQFRKQLGFRGTPIRLLWR 436
>gi|444307311|ref|ZP_21143051.1| GTP-binding protein Der [Arthrobacter sp. SJCon]
gi|443480387|gb|ELT43342.1| GTP-binding protein Der [Arthrobacter sp. SJCon]
Length = 516
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 240/506 (47%), Gaps = 58/506 (11%)
Query: 83 ALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIR 142
LED ++ E ++ +E PV K+D P + IIGRPNVGKS L NR++
Sbjct: 48 GLEDYDLDEEDAALLSGEYGDEDFEGPV---KLD----PVLAIIGRPNVGKSTLVNRILG 100
Query: 143 RREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLA 202
RREA+V +TP VTRD A F ++D+ G E +A I R A +
Sbjct: 101 RREAVVEDTP--GVTRDRVMYSANWNGRNFTLVDTGGWEHDARG--IHARVAEQAEMAVE 156
Query: 203 KTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESL 262
+F++D G D V K LR+ + I+ NK + S A
Sbjct: 157 LADAVLFVVDSAVGATATDEAVMKMLRRSKKPV--ILVANKVDDFAQEADS-----AVLW 209
Query: 263 MLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESK 322
LGFG+P +SA G G+ +L D+++ VL + T + S
Sbjct: 210 GLGFGEPYPVSALHGRGVADLL--------DHVMDVLPEFSTIEGL----------ERSG 251
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
P ++A++GRPNVGKS+LLN L +RV+V AG TRD V E GRT VDTAG
Sbjct: 252 GPRRIALIGRPNVGKSSLLNKLAGSERVVVDNTAGTTRDPVDEFIELGGRTWRFVDTAGI 311
Query: 383 LQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIV 431
+R+ +G + ++++ L +A V ++L +EV A+E GR LV+
Sbjct: 312 RRRQHMAQGADYYASLRTQAALEKAEVAVVLLAVDEVLSEQDVRILQLAIESGRALVLAF 371
Query: 432 NKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTY 491
NK DLL + L + EI+ + V P V SA G + ++ +
Sbjct: 372 NKWDLLDDERRRYLER--------EIEQDLAHVDWAPRVNISAKTGWHKDRLVPALDLAL 423
Query: 492 QKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSD 550
+ W R+PT RLN +L +++ H + QP+I + TQ +RPP FV F +G L
Sbjct: 424 ENWDRRIPTGRLNAFLGELVAAHPHPVRGGKQPRILFGTQASSRPPKFVLFTTG--FLDP 481
Query: 551 AELRFLTKSLKEDFDLGGIPIRITQR 576
RF+T+ L+E F G PI ++ R
Sbjct: 482 GYRRFITRRLRETFGFEGTPIEVSMR 507
>gi|345851263|ref|ZP_08804242.1| GTP-binding protein Der [Streptomyces zinciresistens K42]
gi|345637241|gb|EGX58769.1| GTP-binding protein Der [Streptomyces zinciresistens K42]
Length = 495
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 233/483 (48%), Gaps = 64/483 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + ++GRPNVGKS L NR+I RREA+V + P VTRD A+ RFKV+D+ G
Sbjct: 55 LPVLAVVGRPNVGKSTLVNRMIGRREAVVEDKPG--VTRDRVTYEAEWAGRRFKVVDTGG 112
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
E + G+ A+V A+ ++AI F++D + G D V + LRK
Sbjct: 113 WEQDVL---------GIDASVAAQAEYAIEAADAVVFVVDAKVGATDTDEAVVRLLRKAG 163
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
KP+V C + +G A A LG G+P +SA G G ++ +A+
Sbjct: 164 ---KPVVL---CANKVDGPSGEADATY-LWSLGLGEPHPVSALHGRGTGDMLDAV----- 211
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
L VL D+ Q + P ++A++GRPNVGKS+LLN + E+RV+V
Sbjct: 212 ---LEVLPDAPRQTFGAGG---------VGGPRRIALIGRPNVGKSSLLNKVAGEERVVV 259
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVAL 411
AG TRD V E G VDTAG +R ++G + +++ L +A V +
Sbjct: 260 NEMAGTTRDPVDELIELGGVIWKFVDTAGIRKRVHLQQGADYYASLRTAAALEKAEVAVV 319
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA + AVE GR +V+ NK D L + L + EI+T
Sbjct: 320 LIDAADSISVQDQRIVTMAVEAGRAMVIAYNKWDTLDEERRYYLER--------EIETEF 371
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
QV P V SA GR ++ + W R+PT RLN +L +++ H +
Sbjct: 372 GQVAWAPRVNVSAATGRHMEKLVPAIETALAGWETRVPTGRLNAFLGELVASHPHPVRGG 431
Query: 522 -QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
QP+I + TQ +PP FV F SG + RF+ + L+E+F G PI I+ R +
Sbjct: 432 KQPRILFGTQAGTKPPRFVLFASG--FIEAGYRRFIERRLREEFGFDGTPIHISVRVREK 489
Query: 581 KCG 583
+ G
Sbjct: 490 RGG 492
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 316 PEDDESKL------PLQ-LAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFE 368
PED E + PL LA+VGRPNVGKSTL+N ++ +V + G+TRD V E
Sbjct: 40 PEDVEGAIEAAGHGPLPVLAVVGRPNVGKSTLVNRMIGRREAVVEDKPGVTRDRVTYEAE 99
Query: 369 YQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE---------EVR 419
+ GR +VDT GW Q G + Q+ + A V V+DA+ VR
Sbjct: 100 WAGRRFKVVDTGGWEQ--DVLGIDASVAAQAEYAIEAADAVVFVVDAKVGATDTDEAVVR 157
Query: 420 AVEE-GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+ + G+ +V+ NK+D SG ++ + P + + + TG
Sbjct: 158 LLRKAGKPVVLCANKVDGPSGEADATYLWSLGLGEPHPVSALHGRGTG 205
>gi|194016775|ref|ZP_03055388.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061]
gi|194011381|gb|EDW20950.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061]
Length = 436
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 231/470 (49%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNYDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ L + + + IFM++ R G+ D EV K L + KP+V
Sbjct: 62 DI--GDEPFLAQIRHQAEIAMDEADVIIFMVNGRDGVTSADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L +A+ ++
Sbjct: 117 AVNKLDN-----PEMRSDVYDFYALGFGEPYPISGTHGLGLGDLLDAVAEHFKNL----- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
P+ + +Q ++GRPNVGKS+L+NA+L EDRV+V AG T
Sbjct: 167 ----------------PDTQYDEQVVQFCLIGRPNVGKSSLVNAMLGEDRVIVSNIAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y R +VDTAG ++ K + SV+++ K + R+ VVA+VLD EE
Sbjct: 211 RDAVDTMFTYNQRDFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSDVVAVVLDGEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V++VNK D + + R + Q I+ + P
Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVEKDE------RTMKEFEQNIREHFQFLDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
V+F SAL + +M +I + +R+ T+ LN + + + + Q KI Y
Sbjct: 325 VLFMSALTKKRIHTLMPSIITASENHAMRVQTNILNDIIMDAVAMNPTPTHNGQRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PP+FV F++ + + + RFL +++ F G PI+I R+
Sbjct: 385 ATQVAIKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARA 434
>gi|423321586|ref|ZP_17299457.1| GTPase Der [Lactobacillus crispatus FB077-07]
gi|405594275|gb|EKB67692.1| GTPase Der [Lactobacillus crispatus FB077-07]
Length = 435
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 240/478 (50%), Gaps = 61/478 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+G+PNVGKS LFNR+I +R A+V + P VTRD A+ +F ++D+
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKP--GVTRDRNYAQAEWMGHKFDLIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ E G I + + + + + +V + + LD + L + KP+
Sbjct: 60 GITWEG--GKIEEEIRAQAEIAIEEADVIVMLTNVVNHVTDLDERIAHLLYRTK---KPV 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK ++ + + LG GDPI +S+ G G+ +L + +
Sbjct: 115 ILAVNKADNPEQRSD-----IYDFYSLGLGDPIPVSSSHGTGIGDLLD-----------Q 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ND ++ DV S +++GRPNVGKS+++N LL EDRV+V E G
Sbjct: 159 IVNDFPDDKDTEADDVIS-----------FSVIGRPNVGKSSIVNKLLGEDRVIVANEEG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F + G +VDTAG +R K + SVM++ + R+ VV LVLDA
Sbjct: 208 TTRDAVDTPFTHDGVKFKVVDTAGIRRRGKVYEKTEKYSVMRAMSAIERSDVVFLVLDAS 267
Query: 416 ----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E+ + V E GRG++++VNK DL ++NS K + + E Q +
Sbjct: 268 TGIREQDKHVAGYAHEAGRGIIIVVNKWDL--PKKNSTSAKEFEREIRDEFQ----YLDY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL---RKVMGRHSWKDQSAQP 523
P++F SA G+ + + V + Y R+ +S LN L K++ K +
Sbjct: 322 APILFVSAKTGQRLDQIPNMVKEVYDNQNQRIQSSVLNDLLLEASKLVPTPMVKGKRL-- 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y TQV PPTFV F++ + + + RFL L+++FD G PI+I +PRK
Sbjct: 380 RVYYMTQVSTNPPTFVVFVNDPELMHFSYERFLINQLRQNFDFTGTPIKI----LPRK 433
>gi|340621593|ref|YP_004740045.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
gi|339901859|gb|AEK22938.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
Length = 434
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 230/469 (49%), Gaps = 56/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS FNRLI+RREA+V VTRD G + F V+D+ G
Sbjct: 5 VAIVGRPNVGKSTFFNRLIKRREAIVDAVS--GVTRDRHYGKTDWNGVEFSVIDTGGYVV 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
+ S + + + +FM+DV G+ +D V LRK KPI VA+
Sbjct: 63 -GSDDSFEKEIDKQVSLAIDEADAIVFMVDVEDGITGMDETVADLLRKSK---KPIFVAV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK +S + + E GF + +S+ G G EL D ++++L +
Sbjct: 119 NKVDS-----NNRVANSHEFYAFGFENVYTLSSINGSGTGELL--------DDLVKILPE 165
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
++N+ ED LP + A+VGRPN GKS+ +NAL+ EDR +V AG TRD
Sbjct: 166 RESKND---------ED----LP-RFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRD 211
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDAEEVRA 420
++ + G LVDTAG ++ K K SVM+S + + A V L++DA R
Sbjct: 212 AIDTKYNRFGFEFNLVDTAGIRRKSKVKEDLEFYSVMRSIRAIEHADVCILMIDA--TRG 269
Query: 421 VE------------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
E +G+V++VNK DL+ + N+A K + + +EI+ T +P
Sbjct: 270 FEGQDSNIFWLAQRNRKGIVILVNKWDLVEKQTNTA--KNFEAIIRKEIEP----FTDVP 323
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM-GRHSWKDQSAQPKIKY 527
++F SAL + + Q ++ YQ R+PTS+LN + ++ R + KIK+
Sbjct: 324 IIFISALNKQRIYKAIEQAVEVYQNRSKRIPTSKLNEVMLPIIENRPPPAIKGKYIKIKF 383
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ+ P FV F + + + + RF+ L+E FD G+PI + R
Sbjct: 384 CTQLPTPMPQFVFFANLPQYVKEPYRRFIENQLREHFDFKGVPIDVYFR 432
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP ++GRPN GKS+ N LI +V + TRD + F ++D+AG
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIA--GTTRDAIDTKYNRFGFEFNLVDTAG 231
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
+ ++ L+ + M + + I MID G D + WL + + +
Sbjct: 232 IRRKSKVKEDLEFYSVMRSIRAIEHADVCILMIDATRGFEGQDSNIF-WLAQRNRK-GIV 289
Query: 239 VAMNKCESLHNGTGSLAG--AAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+ +NK + + T + A + F D + I + L +Y+A+ +VE Y
Sbjct: 290 ILVNKWDLVEKQTNTAKNFEAIIRKEIEPFTD-VPIIFISALNKQRIYKAIEQAVEVYQN 348
Query: 297 R 297
R
Sbjct: 349 R 349
>gi|322831770|ref|YP_004211797.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
gi|384256886|ref|YP_005400820.1| GTP-binding protein Der [Rahnella aquatilis HX2]
gi|321166971|gb|ADW72670.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
gi|380752862|gb|AFE57253.1| GTP-binding protein Der [Rahnella aquatilis HX2]
Length = 494
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 234/486 (48%), Gaps = 58/486 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL + R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPG--LTRDRKYGRAEIEGNEFIIVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R AG + + + +FM+D R+GL P D + + LR +
Sbjct: 59 GID--GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR--EKATF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSV 291
+ NK + L + A + LG GD AI+A G G+T+L E + +P
Sbjct: 115 LVANKTDGLDPDS-----ATGDFYSLGLGDVYAIAASHGRGVTQLIEHVLIPFVGEKPEE 169
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESK-----LPLQLAIVGRPNVGKSTLLNALLQ 346
+ N + +T D PED+E LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 VELTEEEANAAYWAEQEATGD-EIPEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILG 228
Query: 347 EDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMR 405
E+RV+V G TRDS+ + R L+DTAG +R K + SV+++ + +
Sbjct: 229 EERVVVYDMPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIED 288
Query: 406 AHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQ 455
A+VV LV+DA E + ++ GR LV++VNK D +S + + V
Sbjct: 289 ANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMS--------EEARAQVKD 340
Query: 456 EIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS 515
++ + V + F SAL G G + V + Y R+ TS L R ++ H
Sbjct: 341 QLDLRLGFVDFARIHFISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDH- 399
Query: 516 WKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLG 567
QP K+KY PP V + K L+D+ R+L + +
Sbjct: 400 ------QPPLVNGRRVKLKYAHAGGYNPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVM 453
Query: 568 GIPIRI 573
G PIRI
Sbjct: 454 GTPIRI 459
>gi|314933657|ref|ZP_07841022.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87]
gi|313653807|gb|EFS17564.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87]
Length = 436
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 241/474 (50%), Gaps = 56/474 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IDEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDN-----PEMRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T+D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------GEETED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V + Y+G+ L+DTAG ++ K + SV+++ K + R++VV +V+DAE+
Sbjct: 211 RDAVDTEYSYEGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ E V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTEDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+ F SA E + + + + R+ +S LN + + + + D+ + + Y
Sbjct: 325 IAFVSAKESLRLRTLFPYITEASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 385 TTQVAIEPPTFVVFVNDVELMHFSYKRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|163841322|ref|YP_001625727.1| GTP-binding protein EngA [Renibacterium salmoninarum ATCC 33209]
gi|162954798|gb|ABY24313.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209]
Length = 504
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 234/481 (48%), Gaps = 57/481 (11%)
Query: 111 DFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDL 170
DF ++ L P + I+GRPNVGKS L NR++ RREA+V +TP VTRD A+
Sbjct: 57 DFDDVEGGLNPVLAIVGRPNVGKSTLVNRILGRREAVVEDTP--GVTRDRVMYNAEWNGR 114
Query: 171 RFKVLDSAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRK 230
F V+D+ G E +A I R A + +F++D G +D + K LR+
Sbjct: 115 EFTVVDTGGWEFDAKG--IHQRVAEQAEMAIELADAVLFVVDATVGATAMDESMMKMLRR 172
Query: 231 HAPQIKPIVAM-NKCES--LHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL 287
KPI+ + NK + + +L G LG G+P ++SA+ G G+ +L
Sbjct: 173 SK---KPIILVGNKADDPRTDSDVAALWG-------LGLGEPWSVSAQHGRGVADLL--- 219
Query: 288 RPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQE 347
D ++ +L + + D P ++A++GRPNVGKS+LLN L
Sbjct: 220 -----DKIMEILPEFSEVETT----------DRRGGPRRIALIGRPNVGKSSLLNKLAGS 264
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
+RV+V P AG TRD V E RT VDTAG +R+ +G + ++++ L +A
Sbjct: 265 ERVVVDPMAGTTRDPVDEFIELGDRTWRFVDTAGIRRRQHMAQGTDFYASLRTQSALEKA 324
Query: 407 HVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
V ++L +EV A+E GR LV+ NK DLL + L + E
Sbjct: 325 EVAVVLLAVDEVLSEQDVRILQLAIESGRALVLAFNKWDLLDDERRRYLER--------E 376
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
I+ + V P V SA G + ++ + + W R+ T RLN +L +++ H
Sbjct: 377 IEQDLAHVEWAPRVNISAKTGWHKDRLVPALDTALESWDRRIATGRLNAFLGELVAAHPH 436
Query: 517 KDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
+ QP+I + TQ +RPP FV F +G L RF+T+ L+E F G PI ++
Sbjct: 437 PVRGGKQPRILFGTQASSRPPKFVLFTTG--FLDPGYRRFITRRLRETFGFEGTPIEVSM 494
Query: 576 R 576
R
Sbjct: 495 R 495
>gi|325962917|ref|YP_004240823.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3]
gi|323469004|gb|ADX72689.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3]
Length = 516
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 242/507 (47%), Gaps = 60/507 (11%)
Query: 83 ALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIR 142
LED ++ E ++ +E PV K+D P + IIGRPNVGKS L NR++
Sbjct: 48 GLEDYDLDEEDAALLRGEYGDEDFEGPV---KLD----PVLAIIGRPNVGKSTLVNRILG 100
Query: 143 RREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTANVLA 202
RREA+V +TP VTRD A F ++D+ G E +A I R A +
Sbjct: 101 RREAVVEDTP--GVTRDRVMYSANWNGRNFTLVDTGGWEHDARG--IHARVAEQAEMAVE 156
Query: 203 KTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM-NKCESLHNGTGSLAGAAAES 261
+F++D G D V K LR+ KP++ + NK + S A
Sbjct: 157 LADAVLFVVDSAVGATATDEGVMKMLRRSK---KPVIMVANKVDDFAQEADS-----ATL 208
Query: 262 LMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSSTQDVTSPEDDES 321
LGFG+P +SA G G+ +L D+++ VL + T + D S
Sbjct: 209 WGLGFGEPYPVSALHGRGVADLL--------DHVMDVLPEFSTIEGT----------DRS 250
Query: 322 KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
P ++A++GRPNVGKS+LLN L +RV+V AG TRD V E GRT VDTAG
Sbjct: 251 GGPRRIALIGRPNVGKSSLLNKLAGTERVVVDNTAGTTRDPVDEFIELGGRTWRFVDTAG 310
Query: 382 WLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVI 430
+R+ +G + ++++ L +A V ++L +EV A+E GR LV+
Sbjct: 311 IRRRQHMAQGADFYASLRTQAALEKAEVAVVLLAVDEVLSEQDVRILQLAIESGRALVLA 370
Query: 431 VNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDT 490
NK DLL + L + EI+ + V P V SA G + ++ +
Sbjct: 371 FNKWDLLDDERRRYLER--------EIEQDLAHVNWAPRVNISAKTGWHKDRLVPALDLA 422
Query: 491 YQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QPKIKYFTQVKARPPTFVAFLSGKKTLS 549
+ W R+ T RLN +L +++ H + QP+I + TQ +RPP FV F +G L
Sbjct: 423 LENWDKRIATGRLNAFLGELVAAHPHPVRGGKQPRILFGTQASSRPPKFVLFTTG--FLD 480
Query: 550 DAELRFLTKSLKEDFDLGGIPIRITQR 576
RF+T+ L+E F G PI ++ R
Sbjct: 481 PGYRRFITRRLRETFGFEGTPIEVSMR 507
>gi|411118714|ref|ZP_11391094.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
gi|410710577|gb|EKQ68084.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
Length = 452
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 236/471 (50%), Gaps = 52/471 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS + NRL +EA+VY+ P VTRD A D F V+D+ G
Sbjct: 3 LPVVAIIGRPNVGKSTIVNRLAGVQEAIVYDEPG--VTRDRTYKRAYWRDREFLVVDTGG 60
Query: 180 LETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + + + L R M A LA+ AIF++D ++G D E+ +WLR+ + +
Sbjct: 61 LVFDDDTEFLPLIREQAMAA--LAEASVAIFVVDGQAGPTGGDHEIAEWLRQQT--VPVL 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES+ G AA+ LG G+P +S G G +L + L +Y+
Sbjct: 117 LAVNKCESVDQGVIQ----AADFWELGLGEPHPVSGIHGSGTGDLLDEL----VNYL--- 165
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
V E+ +++AI GRPNVGKS+LLNA + E+R +V P +G
Sbjct: 166 ---------PPINQVDEIEE------IKVAIAGRPNVGKSSLLNAFVGENRAIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + E G+T ++DTAG +++ E GP + ++ K + RA VV V+DA +
Sbjct: 211 TRDAIDMVVERNGQTYRIIDTAGIRKKKNVEYGPEFFGINRAFKAIARADVVLFVIDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R +EGR V++VNK D + + + +Y +EI + + +
Sbjct: 271 GVTEQDQKLAGRIADEGRACVLVVNKWDAVE-KDSHTIYD-----YEREITSRLHFIEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
V+F SA G+ ++ V ++ R+ TS +N L + H+ Q KI
Sbjct: 325 EVIFISAKTGQRVEKILDLVNGAAEQHRRRVTTSVINEVLEDAISWHTPPTTRGGRQGKI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PP+ F++ +D+ R++ + ++ G PIR+ R
Sbjct: 385 YYGTQVSTQPPSIALFVNDPNLFNDSYRRYIERQFRQALGFKGTPIRLFWR 435
>gi|58337266|ref|YP_193851.1| GTP-binding protein EngA [Lactobacillus acidophilus NCFM]
gi|81311473|sp|Q5FKF4.1|DER_LACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|58254583|gb|AAV42820.1| phosphoglycerate dehydrogenase [Lactobacillus acidophilus NCFM]
Length = 435
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 238/478 (49%), Gaps = 61/478 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+G+PNVGKS LFNR+I +R A+V + P VTRD A+ +F ++D+
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKP--GVTRDRNYAQAEWMGHKFDLIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ E G I D + + + + +V + + LD + + L + KP+
Sbjct: 60 GITWEG--GKIEDEIRAQAEIAIEEADVIVMLTNVVNHVTDLDERIARLLYRTK---KPV 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK ++ + LG GDPI +S+ G G+ +L +
Sbjct: 115 ILAVNKADNPEQ-----RNDIYDFYSLGLGDPIPVSSSHGTGIGDLLD-----------E 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ND + +S DV S +++GRPNVGKS+L+N LL EDRV+V E G
Sbjct: 159 IVNDFPAEKDSEADDVIS-----------FSMIGRPNVGKSSLVNKLLGEDRVIVANEEG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F G +VDTAG +R K + SV+++ + R+ VV LVLDA
Sbjct: 208 TTRDAVDTPFTKDGIKFKVVDTAGIRRRGKVYEKTEKYSVLRAMSAIERSDVVLLVLDAS 267
Query: 416 ----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E+ + V E GRG++++VNK DL SA + +EI++ +
Sbjct: 268 TGIREQDKHVAGYAHEAGRGIIIVVNKWDLPEKNSTSA------KEFEREIRSEFQYLDY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL---RKVMGRHSWKDQSAQP 523
P++F SA G+ + V + Y R+ +S LN L K++ K + +
Sbjct: 322 APILFVSAKTGQRIDQIPSMVKEVYDNQNQRIQSSVLNDLLLEASKLVPTPMIKGK--RL 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y TQV PPTFV F++ + + + RFL L+++FD G PI+I +PRK
Sbjct: 380 RVYYMTQVSTNPPTFVVFVNDPELMHFSYERFLINQLRQNFDFTGTPIKI----LPRK 433
>gi|229496957|ref|ZP_04390662.1| ribosome-associated GTPase EngA [Porphyromonas endodontalis ATCC
35406]
gi|229316059|gb|EEN81987.1| ribosome-associated GTPase EngA [Porphyromonas endodontalis ATCC
35406]
Length = 436
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 235/474 (49%), Gaps = 64/474 (13%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ R+A+V T TRD + G F ++D+ G
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGSRQAIV--TEISGTTRDRQYGHTNWTGHEFSIVDTGGW-- 60
Query: 183 EATSGS--ILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
SGS + + + + + +F++DV +G+ LD EV LR+ KPI+
Sbjct: 61 --VSGSEDVFESEINKQVQIAIEEADVILFVVDVMAGMTDLDREVAGLLRRAK---KPIL 115
Query: 240 AM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+ NK ++ G S AE LG GDP AISA G G +L +A +
Sbjct: 116 LVANKADTFEIGYQS-----AEFYALGLGDPYAISAINGSGTGDLLDA-----------I 159
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+N Q+ T E +LP + A+VGRPN GKS+L+NA + E+R +V AG
Sbjct: 160 VNSLPEQHERET---------EKELP-RFAVVGRPNAGKSSLINAFIGEERNIVTNVAGT 209
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRDS+ + G + YLVDTAG +R K ++ SV++S + + + + ++D
Sbjct: 210 TRDSIYTEYNKFGFSFYLVDTAGIRKRGKVQEDLEYYSVIRSIRAIENSDICIAMIDV-- 267
Query: 418 VRAVE------------EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
R +E +GLVV VNK DL+ + N A+ RV E + I++ + +
Sbjct: 268 TRGIESQDVNILSLVMRNSKGLVVCVNKWDLVENKTNEAI--RVFE---EAIRSRLAPFS 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH---SWKDQSAQ 522
P++F SAL + V+ YQ+ R+PT LN L ++ SWK +
Sbjct: 323 DFPILFISALTKQRIFKVLEVANAVYQRRSKRIPTHELNEVLLPIIEETPPPSWKGKYI- 381
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KIKY TQ+ P+F + + + + D RFL +++++D GIPI I R
Sbjct: 382 -KIKYVTQLPTAVPSFAFYANLPQWVKDPYKRFLENQIRKNWDFSGIPINIFIR 434
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSA 178
LP ++GRPN GKS+L N I +V N TRD I K G F ++D+A
Sbjct: 175 LPRFAVVGRPNAGKSSLINAFIGEERNIVTNVAG--TTRDSIYTEYNKFG-FSFYLVDTA 231
Query: 179 GLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G+ L+ + + + + + I MIDV G+ D+ + + +++ +
Sbjct: 232 GIRKRGKVQEDLEYYSVIRSIRAIENSDICIAMIDVTRGIESQDVNILSLVMRNSKGL-- 289
Query: 238 IVAMNKCESLHNGT 251
+V +NK + + N T
Sbjct: 290 VVCVNKWDLVENKT 303
>gi|168703924|ref|ZP_02736201.1| probable GTP-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 495
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 237/478 (49%), Gaps = 65/478 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS+LFN L RR ++V P VTRD + + G + ++D+ G
Sbjct: 3 LPLVAIVGRPNVGKSSLFNWLAGRRISIV--DPTAGVTRDRVSTVVEHGGRVWDLMDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
+ I+D +TA+V + QFAI FM+DVR G+ PLD +V LR
Sbjct: 61 I-------GIVD-VDDLTADVERQIQFAIESAAVVVFMVDVREGVVPLDEDVAARLRAIN 112
Query: 233 PQIKPIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV 291
KP+V + NK + T L A E LG+G+P+ +SA+ LG EL+EA+
Sbjct: 113 ---KPVVLVANKAD-----TAKLGEQAGEFNRLGYGEPLCVSADQKLGKDELFEAI---- 160
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
Q T +V +PE+ L LAIVGR N GKST +N+L +RV+
Sbjct: 161 -----------LAQLPPDTGEV-APEEPA----LMLAIVGRRNAGKSTFINSLAGGERVI 204
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVA 410
V G TRDSV V E G++ +DTAG + K S ++++++ RA VV
Sbjct: 205 VSEIPGTTRDSVDVRIERDGKSYVAIDTAGVRKTAKMGTNIEFYSNHRAQRSVRRADVVM 264
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
DA VEE + + +VNK DL+ + E + + ++ +
Sbjct: 265 HFFDARHRVSRVDKQLAEYVVEENKPAIFVVNKWDLVKEGMTT-------EEMAEYMRKM 317
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVM-GRHSWKDQ 519
P + +P+ F +A +G+ + V+ + +++ +R+ T LNR +R M
Sbjct: 318 FPMLDHVPIAFITAKDGKNVLRVLQLAVQLHKQAAVRVGTGDLNRVIRAAMEASPPPMAG 377
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S PK+ Y TQ+ PPT V F +G + +R+LTK+L++ F + I++ R+
Sbjct: 378 SKTPKVFYATQIGINPPTIVLFTNGPELFEQTYVRYLTKTLRDTFPFPEVAIKVVLRA 435
>gi|260598897|ref|YP_003211468.1| GTP-binding protein Der [Cronobacter turicensis z3032]
gi|429101324|ref|ZP_19163298.1| GTP-binding protein EngA [Cronobacter turicensis 564]
gi|260218074|emb|CBA32819.1| GTP-binding protein engA [Cronobacter turicensis z3032]
gi|426287973|emb|CCJ89411.1| GTP-binding protein EngA [Cronobacter turicensis 564]
Length = 492
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 234/480 (48%), Gaps = 48/480 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + R A + + + +FM+D R+GL P D + K LR Q
Sbjct: 59 GID--GAEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR--QKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVED---- 293
+ NK + L A A+ LG G+ I+A G G+T L E L P ++D
Sbjct: 115 LVANKTDGLDPDQ-----AVADFYSLGLGEIHPIAASHGRGVTSLLEHVLVPWMDDVDPP 169
Query: 294 --------YMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALL 345
Y + + + +D +P+D LP++LAIVGRPNVGKSTL N +L
Sbjct: 170 EEVDEEAEYWAQFEAEQNGEVVEEEEDDFNPQD----LPIKLAIVGRPNVGKSTLTNRIL 225
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLM 404
EDRV+V G TRDS+ + E GR L+DTAG +R K SV+++ + +
Sbjct: 226 GEDRVVVFDMPGTTRDSIYIPMERDGREFVLIDTAGVRKRGKITDVVEKFSVIKTLQAIE 285
Query: 405 RAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVP 454
A+VV LV+DA E + ++ GR LV++VNK D LS + VK+ V
Sbjct: 286 DANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKDEVK 337
Query: 455 QEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH 514
+ + + + V F SAL G G + V + Y R+ T+ L R ++ H
Sbjct: 338 ETLDYRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTALLTRIMKMAEEDH 397
Query: 515 SWKD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V S K L D+ R+L ++ D+ G PIRI
Sbjct: 398 QPPMVRGRRVKLKYAHAGGYNPPIVVIHGSQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 457
>gi|423685348|ref|ZP_17660156.1| GTP-binding protein Der [Vibrio fischeri SR5]
gi|371495260|gb|EHN70856.1| GTP-binding protein Der [Vibrio fischeri SR5]
Length = 500
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 236/494 (47%), Gaps = 70/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKL + F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAKLEEQEFILIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL D + K LR KP
Sbjct: 59 GID--GTEQGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ +NK + + A+AE LG I+A G G+T L E AL P +M
Sbjct: 114 FLVVNKIDGI-----DADAASAEFWQLGMNKVYQIAASHGRGVTSLLELALAP----FME 164
Query: 297 RVLNDSCTQNNSSTQDVT---------------SPEDDESKL---PLQLAIVGRPNVGKS 338
++ +S N D+T E D ++L P++LAI+GRPNVGKS
Sbjct: 165 ELVEESLKDENGEITDLTEFEDFEDEEKELTEEDAEKDFARLQDQPIKLAIIGRPNVGKS 224
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E +G+ L+DTAG +R + + SV+
Sbjct: 225 TLTNRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKFSVI 284
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR LV+ VNK D L
Sbjct: 285 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWD--------GLDN 336
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V E+ + V + F SAL G G + V + Y R+ TS L R +
Sbjct: 337 DVKEKVKSELDRRLGFVDFARIHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRIM 396
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + K L + RFL
Sbjct: 397 KMAQDDH-------QPPLVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNY 449
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 450 YRKSLEIMGTPIRI 463
>gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046]
Length = 503
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 233/477 (48%), Gaps = 40/477 (8%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+N++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D
Sbjct: 12 LNMVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICID 69
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G++ T + R A + + + +FM+D R+GL P D + K LR K
Sbjct: 70 TGGID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---K 124
Query: 237 P-IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY 294
P + NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 125 PTFLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLERVLLPWMEDL 179
Query: 295 MLRVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQED 348
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+
Sbjct: 180 APQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEE 239
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAH 407
RV+V G TRDS+ + E GR L+DTAG +R K SV+++ + + +
Sbjct: 240 RVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDTN 299
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 300 VVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 351
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 352 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPP 411
Query: 518 -DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 412 LVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 468
>gi|399053691|ref|ZP_10742490.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|433544583|ref|ZP_20500963.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
gi|398048468|gb|EJL40940.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|432184162|gb|ELK41683.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
Length = 437
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 237/470 (50%), Gaps = 51/470 (10%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS +FNRL+ R A+V + P VTRD G + F V+D+ G
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLVGERIAIVEDMPG--VTRDRLYGKGEWLTHTFHVIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E T IL + + + I + D R+G+ D+E+ + L + KP+V
Sbjct: 61 IEFGETD-EILTQMRYQAELAIDEANVIIMIADSRTGVTDADVELARMLNRTG---KPVV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ++ + + LG G+P IS GLG+ ++ E + V
Sbjct: 117 LAVNKADN-----PDMRADIYDFYSLGLGEPFPISGSHGLGLGDMLEEV----------V 161
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + +DV ++++I+GRPNVGKS+L NALL E+RV+V AG
Sbjct: 162 RHFPAEDDEERKEDV-----------IRVSIIGRPNVGKSSLTNALLGEERVIVSDVAGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ FE G++ LVDTAG +R K + SVM++ +++ + VV +V++ EE
Sbjct: 211 TRDAIDTPFERDGQSYVLVDTAGMRKRGKVYETTEKYSVMRAMRSIEDSDVVLVVINGEE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E GRG+++IVNK D + ++ +R E + +E + +
Sbjct: 271 GIIEQDKKIAGYAHEAGRGVIIIVNKWDAVE--KDDKTMRRFTELIREEFK----YLDYA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
P+++ SA + ++ +V + Q +R+PTS LN + R D+ + KI
Sbjct: 325 PILYVSAKSKQRVHTILPKVNEVAQAHAMRIPTSVLNDIVTDATIRTPPPSDRGKRLKIN 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ +PPTF+ F++ + + + R++ ++E F G P+RI R
Sbjct: 385 YATQATVKPPTFILFVNDPELMHFSYERYIENKIREAFVFEGTPVRIWTR 434
>gi|168334058|ref|ZP_02692274.1| small GTP-binding protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 455
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 237/472 (50%), Gaps = 56/472 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFNRL + + +++ +TP VTRD A+ + +F ++D+ G+
Sbjct: 17 PVVAVVGRPNVGKSTLFNRLAKAKISIIDDTP--GVTRDRIYADAEWLNKKFTLVDTGGI 74
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E + ++ IL + + IF++DV++G+ D+ V +RK KP+V
Sbjct: 75 EPD-SNDVILSQMRKQAEVAIDTADVIIFLVDVKTGVVDSDMHVANMVRKSQ---KPVVL 130
Query: 240 AMNKCESL---HNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYML 296
+NK + + H G E LG G+PI +SA L + ++
Sbjct: 131 VVNKVDDMAKYHMGI-------YEFYSLGLGEPIPVSASQPLNLGDM------------- 170
Query: 297 RVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
L++ C ++ ED+++ +++AIVG+PNVGKS+L+N +L EDRV+V A
Sbjct: 171 --LDEVCAH---FPEEYVEIEDEDA---IKVAIVGKPNVGKSSLVNKILGEDRVIVSDIA 222
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALVLDA 415
G TR+SV G+ L+DTAG +R+K K SV+++ + RA +V +++DA
Sbjct: 223 GTTRESVDTEVVIDGQKYVLIDTAGVRKRKKVKEDIEKYSVIRTISAIERADIVLILIDA 282
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
E A E G+G +++VNK D + + + + + KE V + +
Sbjct: 283 NEGITEQDTKIAGMAHEAGKGSIIVVNKWDAIE-KNDKTMNQFTKELV-----NTLAYMK 336
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHS-WKDQSAQPK 524
P F SAL G+ + + Q LR+ T LN L + MG++ D+ K
Sbjct: 337 YAPCAFISALTGQRVNKLFDTIKIIAQNQTLRISTGVLNDVLIEAMGQNQPPSDKGKALK 396
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQV +PPTF+ F++ K L + R++ ++E F G PI R
Sbjct: 397 IYYMTQVSIKPPTFILFVNDKNLLHFSYQRYIENQMREAFGFKGTPIHFIVR 448
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 117/271 (43%), Gaps = 33/271 (12%)
Query: 109 PVDFTKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLG 168
P ++ +I+ V I+G+PNVGKS+L N+++ +V + TR+ + +
Sbjct: 179 PEEYVEIEDEDAIKVAIVGKPNVGKSSLVNKILGEDRVIVSDIA--GTTRESVDTEVVID 236
Query: 169 DLRFKVLDSAGLETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKW 227
++ ++D+AG+ +++ + + T + + + + +ID G+ D ++
Sbjct: 237 GQKYVLIDTAGVRKRKKVKEDIEKYSVIRTISAIERADIVLILIDANEGITEQDTKIAGM 296
Query: 228 LRKHAPQIKPIVAMNKCESLHNGTGSLAGAAAESL----MLGFGDPIAISAETGLGMTEL 283
H I+ +NK +++ ++ E + + + ISA TG + +L
Sbjct: 297 --AHEAGKGSIIVVNKWDAIEKNDKTMNQFTKELVNTLAYMKYAPCAFISALTGQRVNKL 354
Query: 284 YEALRPSVEDYMLR----VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKST 339
++ ++ ++ LR VLND + Q P D+ K L++ + + ++ T
Sbjct: 355 FDTIKIIAQNQTLRISTGVLNDVLIEAMGQNQ----PPSDKGK-ALKIYYMTQVSIKPPT 409
Query: 340 LLNALLQEDRVLVGPEAGLTRDSVRVHFEYQ 370
+ L D+ L +HF YQ
Sbjct: 410 FI--LFVNDKNL-------------LHFSYQ 425
>gi|422806467|ref|ZP_16854899.1| ribosome GTPase EngA [Escherichia fergusonii B253]
gi|324113005|gb|EGC06981.1| ribosome GTPase EngA [Escherichia fergusonii B253]
Length = 490
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLTP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|224476594|ref|YP_002634200.1| GTP-binding protein EngA [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783167|sp|B9DNV9.1|DER_STACT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222421201|emb|CAL28015.1| putative GTP-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 436
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 239/474 (50%), Gaps = 56/474 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR++ R ++V +TP VTRD + F V+D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDTP--GVTRDRIYSSGEWLTHDFNVIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E T + + + IFM++ R GL D + + L K KP+V
Sbjct: 62 EL--TDAPFQTQIRAQAEIAIDEADVIIFMVNQREGLTQTDEMIAQMLYKTN---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ T A LGFG+P IS GLG+ +L + V
Sbjct: 117 AVNKVDNPEMRTDIYDFYA-----LGFGEPFPISGSHGLGLGDLLD-----------EVA 160
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
N+ + + + T ++L+++GRPNVGKS+L+NA+L EDRV+V AG T
Sbjct: 161 NNFKDEEDDDYDEDT----------IKLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD++ + Y+ + L+DTAG ++ K + SV+++ K + R++VV +VLDAEE
Sbjct: 211 RDAIDTEYSYEDQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVLDAEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D L ++S K+ ++ + QE Q + P
Sbjct: 271 IIEQDKRVAGYAHEEGKAVVIVVNKWDTLD--KDSKTMKKFEDKIRQEFQF----LDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+ F SA E + + + + + R+ +S LN + + + + D+ + K+ Y
Sbjct: 325 IAFVSAKEKQRLRTLFPLIKEASENHKKRVQSSTLNEVITDAISMNPTPTDKGRRLKVFY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
TQV PPTFV F++ + + + R+L +++ F G PIRI +PRK
Sbjct: 385 ATQVAVEPPTFVVFVNDAELMHFSYKRYLENQIRDAFGFEGTPIRI----IPRK 434
>gi|32455227|gb|AAP83329.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Enteritidis]
Length = 490
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 232/482 (48%), Gaps = 54/482 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P ++D
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAP 168
Query: 297 RVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D Q +PEDD LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E R L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 LLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDH----- 395
Query: 520 SAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
QP K+KY PPT V + K L D+ R+L ++ ++ G PI
Sbjct: 396 --QPPLVRGRRVKLKYAHAGGYNPPTVVIHGNQVKDLPDSYKRYLMDYFRKSLEVMGTPI 453
Query: 572 RI 573
RI
Sbjct: 454 RI 455
>gi|300724175|ref|YP_003713492.1| GTP-binding protein [Xenorhabdus nematophila ATCC 19061]
gi|297630709|emb|CBJ91374.1| GTP-binding protein, essential for cell growth [Xenorhabdus
nematophila ATCC 19061]
Length = 496
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 233/481 (48%), Gaps = 45/481 (9%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F ++D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGQEFIIIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + A + + + +FM+D RSGL P D + K LR +
Sbjct: 59 GID--GTEEGVETHMAAQSLMAIEEADIVLFMVDARSGLMPADHAIAKHLRSR--EKATF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + + + + AE LG GD +I+A G G+T+L E LRP +
Sbjct: 115 LVANKTDGI-----DIETSVAEFYSLGLGDIYSIAASHGRGVTQLIERVLRPFSDKEETE 169
Query: 298 VLNDSCTQNNSS-------------TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNAL 344
+ + + N++ + E D + LPL+LAIVGRPNVGKSTL N +
Sbjct: 170 EVELTEEEANAAYWAEMEQAELDAAIEKEPEEEFDPTTLPLKLAIVGRPNVGKSTLTNRI 229
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNL 403
L E+RV+V G TRDS+ + E GR L+DTAG +R K + SV+++ + +
Sbjct: 230 LGEERVVVFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLQAI 289
Query: 404 MRAHVVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAV 453
A+VV LV+DA E + ++ GR LV+ VNK D +S + K+ V
Sbjct: 290 EDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMS--------QEDKDHV 341
Query: 454 PQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
+ + V V F SAL G G + + + Y+ R+ TS L R +R
Sbjct: 342 KDMLDLRLGFVDFARVHFISALHGSGVGNLFESIQEAYESATRRVNTSLLTRIMRMAEDD 401
Query: 514 HS-WKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H + + K+KY PP V + L D+ R+L + + G PIR
Sbjct: 402 HQPPMIRGRRVKMKYAHAGGYNPPIVVIHGNQVTDLPDSYKRYLMNYFRRSLKVMGTPIR 461
Query: 573 I 573
I
Sbjct: 462 I 462
>gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
Length = 492
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 234/484 (48%), Gaps = 50/484 (10%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP + ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AK + F V+D+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADFPG--LTRDRKYGQAKYDEYEFIVVDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ + I A + + + +F++D R+G+ D + LRK Q
Sbjct: 59 GID--GSEEGIELEMAEQSLLAIEEADVVMFLVDARAGMTAADQAIANHLRKLNTQKSIF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-ML 296
+ NK + L + + AE L G+ I+A G G+T+L E AL+P +E++ L
Sbjct: 117 LVANKIDGLDADS-----SCAEFYQLALGEVYQIAASHGRGVTQLLETALQPVIEEFNRL 171
Query: 297 RVLNDSCTQNNSSTQ-DVTSPEDDE----SKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
+ + Q N + + + E DE S P++LAI+GRPNVGKSTL N +L E+RV+
Sbjct: 172 NGVEEELEQINEFDEFEEGAEEPDEYQEFSDKPIKLAIIGRPNVGKSTLTNRILGEERVI 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVA 410
V G TRDS+ + + L+DTAG +R+K A SV+++ K + A+VV
Sbjct: 232 VYDMPGTTRDSIYIPMTRNDQEYVLIDTAGVRKRKKVSDVAEKFSVIKTLKAIEDANVVL 291
Query: 411 LVLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+DA E A+ GR LV+ VNK D L + VK + E+
Sbjct: 292 LVVDAREGISDQDLSLLGFALNSGRSLVIAVNKWD--------GLDEYVKTRIKTELDRR 343
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+ + + F SAL G G + V + YQ R+ T+ L R + H
Sbjct: 344 LGFIDFARIHFISALHGTGVGHLFESVDEAYQSATKRISTAMLRRIMDMAQSDH------ 397
Query: 521 AQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
QP K+KY PP V + L D+ R+L ++ + G PI+
Sbjct: 398 -QPPLVAGRRVKLKYAHAGGYNPPIIVIHGNQLNDLPDSYKRYLMNYYRKSLKIMGTPIK 456
Query: 573 ITQR 576
I R
Sbjct: 457 IEFR 460
>gi|417624466|ref|ZP_12274765.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
gi|345377427|gb|EGX09359.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
Length = 490
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEYAEYWEQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|419729193|ref|ZP_14256153.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419735248|ref|ZP_14262131.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419737756|ref|ZP_14264527.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742609|ref|ZP_14269281.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419751219|ref|ZP_14277643.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421568821|ref|ZP_16014532.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421576400|ref|ZP_16021999.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581141|ref|ZP_16026688.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584185|ref|ZP_16029694.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|381295399|gb|EIC36513.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381297523|gb|EIC38613.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381303921|gb|EIC44932.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381304422|gb|EIC45406.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381313538|gb|EIC54320.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|402518290|gb|EJW25675.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402518742|gb|EJW26114.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402529205|gb|EJW36444.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402531248|gb|EJW38460.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 490
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 232/482 (48%), Gaps = 54/482 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAAQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P ++D
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAP 168
Query: 297 RVLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D Q + +PEDD LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E R L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 LLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDH----- 395
Query: 520 SAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
QP K+KY PP V + K L D+ R+L ++ ++ G PI
Sbjct: 396 --QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGTPI 453
Query: 572 RI 573
RI
Sbjct: 454 RI 455
>gi|30063903|ref|NP_838074.1| GTP-binding protein EngA [Shigella flexneri 2a str. 2457T]
gi|110806442|ref|YP_689962.1| GTP-binding protein EngA [Shigella flexneri 5 str. 8401]
gi|384544127|ref|YP_005728190.1| GTP-binding protein engA [Shigella flexneri 2002017]
gi|415853751|ref|ZP_11529681.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
gi|417703044|ref|ZP_12352155.1| small GTP-binding domain protein [Shigella flexneri K-218]
gi|417724132|ref|ZP_12372936.1| small GTP-binding domain protein [Shigella flexneri K-304]
gi|417729436|ref|ZP_12378134.1| small GTP-binding domain protein [Shigella flexneri K-671]
gi|417734231|ref|ZP_12382882.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
gi|417739382|ref|ZP_12387961.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
gi|417744403|ref|ZP_12392929.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
gi|418257516|ref|ZP_12881184.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
gi|420342837|ref|ZP_14844310.1| GTPase Der [Shigella flexneri K-404]
gi|424838837|ref|ZP_18263474.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
gi|123146827|sp|Q0T208.1|DER_SHIF8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|30042158|gb|AAP17884.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T]
gi|110615990|gb|ABF04657.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401]
gi|281601913|gb|ADA74897.1| GTP-binding protein engA [Shigella flexneri 2002017]
gi|313650997|gb|EFS15397.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
gi|332754198|gb|EGJ84566.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
gi|332755561|gb|EGJ85925.1| small GTP-binding domain protein [Shigella flexneri K-671]
gi|332756305|gb|EGJ86656.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
gi|332766344|gb|EGJ96554.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
gi|333001904|gb|EGK21470.1| small GTP-binding domain protein [Shigella flexneri K-218]
gi|333016427|gb|EGK35758.1| small GTP-binding domain protein [Shigella flexneri K-304]
gi|383467889|gb|EID62910.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
gi|391265910|gb|EIQ24877.1| GTPase Der [Shigella flexneri K-404]
gi|397897138|gb|EJL13549.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
Length = 490
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ +NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVVNKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|401679822|ref|ZP_10811746.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
gi|400218949|gb|EJO49820.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
Length = 444
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 246/477 (51%), Gaps = 55/477 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V ++GRPNVGKS LFN ++ +R ++V + P VTRD A+ + F ++D+ G+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIP--GVTRDRIYFDAEWLNREFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANV-LAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E + ++ + + A + + + +F++D + G+ P D EV LR KP+V
Sbjct: 62 EFVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSG---KPVV 118
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +S++ E LG GDPI ISA+ + + +L
Sbjct: 119 LVVNKIDSVNQEPN-----IYEFYNLGLGDPIGISAKNLMNLGDL--------------- 158
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L+D+ +V D+E + +AI+GRPNVGKS+L NALL +DRV+V AG
Sbjct: 159 LDDTVKHFPPVGTNV----DEEDTI--HVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGT 212
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA-- 415
TRDS+ H+ + + L+DTAG ++ K ++ S+++S +++ R+ +V VLD
Sbjct: 213 TRDSIDTHWTHGDQKFVLIDTAGMRRKSKIDEAVERYSIVRSLRSVDRSDIVVFVLDGVD 272
Query: 416 ---EEVR-----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E+ + A E G+G++++VNK DL+ + L R E + E+ +
Sbjct: 273 GVTEQDKKIAGYAYEAGKGVIIVVNKWDLVEKDDKTTL--RYTEDIYDELGF----LQFA 326
Query: 468 PVVFTSALEGR--GRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ-PK 524
P++F SAL + R+A M + + Q R+ T LN+ L+ + ++ + PK
Sbjct: 327 PILFASALTKQRIHRLADMLKFVSEQQ--YRRVSTGTLNQLLQDAQTVNPVPSRNGRIPK 384
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
I Y TQ +PPTF+ F++ + + + +RFL L+E F G PIR+ R R+
Sbjct: 385 IYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRLRESFGFEGTPIRLILRGKKRE 441
>gi|218548052|ref|YP_002381843.1| GTP-binding protein EngA [Escherichia fergusonii ATCC 35469]
gi|331684159|ref|ZP_08384755.1| ribosome-associated GTPase EngA [Escherichia coli H299]
gi|416898704|ref|ZP_11928250.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
gi|417115520|ref|ZP_11966656.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
gi|422799824|ref|ZP_16848323.1| ribosome GTPase EngA [Escherichia coli M863]
gi|450191393|ref|ZP_21891202.1| GTP-binding protein Der [Escherichia coli SEPT362]
gi|226741141|sp|B7LKC7.1|DER_ESCF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218355593|emb|CAQ88204.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
fergusonii ATCC 35469]
gi|323967959|gb|EGB63371.1| ribosome GTPase EngA [Escherichia coli M863]
gi|327252218|gb|EGE63890.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
gi|331079111|gb|EGI50313.1| ribosome-associated GTPase EngA [Escherichia coli H299]
gi|386140939|gb|EIG82091.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
gi|449319540|gb|EMD09589.1| GTP-binding protein Der [Escherichia coli SEPT362]
Length = 490
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|421726697|ref|ZP_16165866.1| GTP-binding protein Der [Klebsiella oxytoca M5al]
gi|410372424|gb|EKP27136.1| GTP-binding protein Der [Klebsiella oxytoca M5al]
Length = 492
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 235/484 (48%), Gaps = 56/484 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM- 295
+ NK + + A A+ LG G+ I+A G G+T L E L P V++
Sbjct: 114 FLVANKTDGIDADQ-----AIADFWSLGLGEIYPIAASHGRGVTSLLEHVLLPWVDEVNP 168
Query: 296 -LRVLNDSCT----QNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQED 348
V D+ + + +V PEDD LP++LAIVGRPNVGKSTL N +L ED
Sbjct: 169 PEEVDEDAAYWAQFEAEQNGAEVEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGED 228
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAH 407
RV+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+
Sbjct: 229 RVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDAN 288
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 VVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 341 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVGTAMLTRIMTMAAEDH--- 397
Query: 518 DQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
QP K+KY PP V + K L D+ R+L ++ ++ G
Sbjct: 398 ----QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGT 453
Query: 570 PIRI 573
PIRI
Sbjct: 454 PIRI 457
>gi|409992857|ref|ZP_11276024.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39]
gi|409936275|gb|EKN77772.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
Length = 453
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 243/473 (51%), Gaps = 58/473 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V IIGRPNVGKS L NRL + ++A+V++ P +TRD A D F V+D+ GL
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQP--GMTRDRTYRSAYWQDREFIVVDTGGL 61
Query: 181 ETEATSGSI-LDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+ + + L R + A LA+ AI ++D ++G D + WLR+ ++ ++
Sbjct: 62 VFDDDTEFVPLIREQALMA--LAEATAAILVVDGQTGPTGGDEAIASWLRQQ--KVPILL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NKCES G AA+ LG G P IS+ G G EL + L +
Sbjct: 118 AVNKCESPTQGLTQ----AAQFWELGLGTPFPISSIHGNGTGELLDTLIEHLP------- 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+S EDD+++ L++AIVGRPNVGKS+LLN L ++R +V P +G T
Sbjct: 167 --------------SSTEDDDNE-ELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
RD++ E+ G T LVDTAG ++R+K E G + ++ K + RA VV V+DA E
Sbjct: 212 RDAIDTIVEHNGNTYRLVDTAG-IRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSAL-YKRVKEAVPQEIQTVIPQVTG 466
R ++GR V++VNK D + + L Y++V +++ + +
Sbjct: 271 GVTDQDQKLAGRIADDGRACVIVVNKWDAVEKDSYTILEYEKV-------MRSRLYFLDW 323
Query: 467 IPVVFTSALEGRGRIAVMHQVID-TYQKWCLRLPTSRLNRWLRKVMGRHS--WKDQSAQP 523
++F SA+ G+ R+ + +++D ++ R+ T+ +N + + + HS Q Q
Sbjct: 324 ADMIFVSAMTGQ-RVEKIFKLVDKAAEENRRRVSTAVINEVIEEAVRWHSPPTSRQGRQG 382
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQV + PPT V F++ K D R++ ++ G PIR+ R
Sbjct: 383 KIYYGTQVTSGPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWR 435
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 113 TKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRF 172
T+ D N V I+GRPNVGKS+L N + + A+V +P TRD + + + +
Sbjct: 169 TEDDDNEELRVAIVGRPNVGKSSLLNTFLGQERAIV--SPISGTTRDAIDTIVEHNGNTY 226
Query: 173 KVLDSAGLETE---ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLR 229
+++D+AG+ + A + + +F+ID G+ D ++ +
Sbjct: 227 RLVDTAGIRRKKHVEYGAEFFGINRAFKA--IRRADVVLFVIDAVEGVTDQDQKLAGRIA 284
Query: 230 KHAPQIKPIVAMNKCESLHNGTGSLAGAAAESLM------LGFGDPIAISAETGLGMTEL 283
++ +NK +++ + ++ E +M L + D I +SA TG + ++
Sbjct: 285 DDGRAC--VIVVNKWDAVEKDSYTI--LEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKI 340
Query: 284 YEALRPSVEDYMLRV 298
++ + + E+ RV
Sbjct: 341 FKLVDKAAEENRRRV 355
>gi|417690635|ref|ZP_12339855.1| small GTP-binding domain protein [Shigella boydii 5216-82]
gi|332087958|gb|EGI93083.1| small GTP-binding domain protein [Shigella boydii 5216-82]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGAPIRI 455
>gi|295692881|ref|YP_003601491.1| GTP-binding protein enga [Lactobacillus crispatus ST1]
gi|295030987|emb|CBL50466.1| GTP-binding protein engA [Lactobacillus crispatus ST1]
Length = 435
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 240/478 (50%), Gaps = 61/478 (12%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
+LP V I+G+PNVGKS LFNR+I +R A+V + P VTRD A+ +F ++D+
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKP--GVTRDRNYAQAEWMGHKFDLIDTG 59
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G+ E G I + + + + + +V + + LD + L + KP+
Sbjct: 60 GITWEG--GKIEEEIRAQAEIAIEEADVIVMLTNVVNHVTDLDERIAHLLYRTK---KPV 114
Query: 239 V-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR 297
+ A+NK ++ + + LG GDPI +S+ G G+ +L + +
Sbjct: 115 ILAVNKADNPEQRSD-----IYDFYSLGLGDPIPVSSSHGTGIGDLLD-----------Q 158
Query: 298 VLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
++ND ++ DV S +++GRPNVGKS+++N LL EDRV+V E G
Sbjct: 159 IVNDFPDDKDTEADDVIS-----------FSVIGRPNVGKSSIVNKLLGEDRVIVANEEG 207
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
TRD+V F + G +VDTAG +R K + SVM++ + R+ VV LV+DA
Sbjct: 208 TTRDAVDTPFTHDGVKFKVVDTAGIRRRGKVYEKTEKYSVMRAMSAIERSDVVLLVIDAS 267
Query: 416 ----EEVRAV-----EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E+ + V E GRG++++VNK DL ++NS K + + E Q +
Sbjct: 268 TGIREQDKHVAGYAHEAGRGIIIVVNKWDL--PKKNSTSAKEFEREIRDEFQ----YLDY 321
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL---RKVMGRHSWKDQSAQP 523
P++F SA G+ + + V + Y R+ +S LN L K++ K +
Sbjct: 322 APILFVSAKTGQRLDQIPNMVKEVYDNQNQRIQSSVLNDLLLEASKLVPTPMVKGKRL-- 379
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
++ Y TQV PPTFV F++ + + + RFL L+++FD G PI+I +PRK
Sbjct: 380 RVYYMTQVSTNPPTFVVFVNDPELMHFSYERFLINQLRQNFDFTGTPIKI----LPRK 433
>gi|163802477|ref|ZP_02196370.1| GTP-binding protein EngA [Vibrio sp. AND4]
gi|159173778|gb|EDP58593.1| GTP-binding protein EngA [Vibrio sp. AND4]
Length = 498
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 238/496 (47%), Gaps = 73/496 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGD-LRFKVLDS 177
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A LG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQASLGEEHEFIVIDT 58
Query: 178 AGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP 237
G++ T + + A + + + +F++D R+GL P D + LRK KP
Sbjct: 59 GGID--GTEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIE---KP 113
Query: 238 -IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM 295
++ +NK + + A A+ LG D I+A G G+T L E AL P +D +
Sbjct: 114 AMLVVNKIDGI-----DADAACADFWQLGVDDMYHIAAAHGRGVTALLERALAPFFDDLL 168
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKL------------------PLQLAIVGRPNVGK 337
+ +D+T ED+E + P++LAI+GRPNVGK
Sbjct: 169 ------ASESEEGEIEDLTGFEDEELAIEDYTEEDAEAEFKRLQDQPIKLAIIGRPNVGK 222
Query: 338 STLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSV 396
STL N +L E+RV+V G TRDS+ + E GR L+DTAG +R + + SV
Sbjct: 223 STLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSV 282
Query: 397 MQSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALY 446
+++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 283 VKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLD 334
Query: 447 KRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRW 506
VKE V +E+ + V + F SAL G G + + + Y+ R+ TS L R
Sbjct: 335 NEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRI 394
Query: 507 LRKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTK 558
++ H QP K+KY PP V + + L D+ R+L
Sbjct: 395 MKMATDDH-------QPPMVRGRRIKLKYAHAGGYNPPIVVVHGNMVRELPDSYKRYLMN 447
Query: 559 SLKEDFDLGGIPIRIT 574
++ ++ G PIRI
Sbjct: 448 YFRKSLEIMGTPIRIN 463
>gi|432393023|ref|ZP_19635853.1| GTPase Der [Escherichia coli KTE21]
gi|430918179|gb|ELC39218.1| GTPase Der [Escherichia coli KTE21]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|17227979|ref|NP_484527.1| GTP-binding protein EngA [Nostoc sp. PCC 7120]
gi|26006724|sp|Q8YZH7.1|DER_NOSS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17129828|dbj|BAB72441.1| GTP binding protein [Nostoc sp. PCC 7120]
Length = 453
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 237/472 (50%), Gaps = 52/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V IIGRPNVGKS L NRL + A+V++ P VTRD A D F+V+D+ G
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPG--VTRDRTYLPAYWSDREFQVVDTGG 60
Query: 180 LE-TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
L + T L R + A L + AIF+++ ++G + D E+ +WLR+ +
Sbjct: 61 LVFNDDTEFLPLIRQQALAA--LHEASAAIFVVNGQTGPNSADEEIAEWLRQQP--VPVF 116
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NKCES G+ A+E LG G+P ISA G G EL D +++
Sbjct: 117 LAVNKCESPDQGSIQ----ASEFWELGLGEPYPISAIHGNGTGELL--------DELIKH 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
L VT E++ +++AI+GRPNVGKS+LLNA E+RV+V P +G
Sbjct: 165 L-----------PPVTELEENNE---IKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ E G+ L+DTAG +++ + G S+ ++ K + RA VV LV+DA +
Sbjct: 211 TRDAIDTFIERDGQNYRLIDTAGIRKKKSIDYGTEFFSINRAFKAIRRADVVLLVIDALD 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
R ++EG+ VV+VNK D + + + +Y K ++ +
Sbjct: 271 GVTEQDQKLAGRILDEGKACVVVVNKWDAVE-KDSYTIYDYEK-----NLEARLHFTEWA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA--QPKI 525
++ SA+ G+ ++ V ++ R+ TS +N L + HS Q +I
Sbjct: 325 DTIYVSAVTGQRVEKILELVTKANEEHKRRVSTSVINEVLEDAVRWHSPPTSRGGRQGRI 384
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV +PPT F++ K +D R++ + ++ G PIR+ RS
Sbjct: 385 YYGTQVSTQPPTIALFVNEAKRFNDNYRRYIERQFRQQLGFKGTPIRLLWRS 436
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 113 TKIDINLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRF 172
T+++ N + IIGRPNVGKS+L N +V +P TRD + + +
Sbjct: 169 TELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIV--SPISGTTRDAIDTFIERDGQNY 226
Query: 173 KVLDSAGLETEATSGSILDRTAGMTAN----VLAKTQFAIFMIDVRSGLHPLDLEVGKWL 228
+++D+AG+ + SI T + N + + + +ID G+ D ++ +
Sbjct: 227 RLIDTAGIRKKK---SIDYGTEFFSINRAFKAIRRADVVLLVIDALDGVTEQDQKLAGRI 283
Query: 229 RKHAPQIKPIVAMNKCESLHNGTGSL----AGAAAESLMLGFGDPIAISAETGLGMTELY 284
+V +NK +++ + ++ A + D I +SA TG + ++
Sbjct: 284 LDEGKAC--VVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIYVSAVTGQRVEKIL 341
Query: 285 EALRPSVEDYMLRV 298
E + + E++ RV
Sbjct: 342 ELVTKANEEHKRRV 355
>gi|403526650|ref|YP_006661537.1| GTP-binding protein EngA [Arthrobacter sp. Rue61a]
gi|403229077|gb|AFR28499.1| GTP-binding protein EngA [Arthrobacter sp. Rue61a]
Length = 516
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 229/473 (48%), Gaps = 53/473 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+ L P + IIGRPNVGKS L NR++ RREA+V +TP VTRD A+ F ++D
Sbjct: 75 LKLDPVLAIIGRPNVGKSTLVNRILGRREAVVEDTP--GVTRDRVMYSARWNGRNFTLVD 132
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E +A I R A + +F++D G D V K LRK K
Sbjct: 133 TGGWEHDAKG--IHARVAEQAEMAVELADAVLFVVDSAVGATATDEGVMKMLRKSK---K 187
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NK + S A LGFG+P +SA G G+ +L + + ++ +Y
Sbjct: 188 PVIMVANKVDDFAQEADS-----ATLWGLGFGEPYPVSALHGRGVADLLDHVMDTLPEYS 242
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
L D ++ P ++A++GRPNVGKS+LLN L +RV+V P
Sbjct: 243 L---VDGVERSGG---------------PRRIALIGRPNVGKSSLLNKLAGSERVVVDPL 284
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD V E RT VDTAG +R+ +G + ++++ L +A V ++L
Sbjct: 285 AGTTRDPVDEFIELGDRTWRFVDTAGIRRRQHMAQGADFYASLRTQAALEKAEVAVVLLA 344
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+EV A+E GR LV+ NK DLL + L + EI+ + V
Sbjct: 345 VDEVLSEQDVRILQLAIESGRALVLAFNKWDLLDDERRRYLER--------EIEQDLAHV 396
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
P V SA G + ++ + + W R+PT RLN +L +++ H + QP
Sbjct: 397 EWAPRVNISAKTGWHKDRLVPALDIALESWDRRIPTGRLNAFLGELVAAHPHPVRGGKQP 456
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I + TQ +RPP FV F +G L RF+T+ L+E F G PI + R
Sbjct: 457 RILFGTQASSRPPKFVLFTTG--FLDPGYRRFITRRLRETFGFEGTPIEVNMR 507
>gi|386723501|ref|YP_006189827.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
gi|384090626|gb|AFH62062.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
Length = 440
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 235/470 (50%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS +FNR+I + A+V + P VTRD G + D F ++D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPG--VTRDRLYGRGEWLDQEFSIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWL-RKHAPQIKPIV 239
E E IL + + IFM+D ++G+ P D EV + L R P + V
Sbjct: 62 EIEGED-HILRSVRVQAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRSQKPVV---V 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L A E +GFG+ + IS G G+ +L E + D
Sbjct: 118 AVNKVDNLQR-----ADDIYEFYSMGFGEIVGISGAHGTGIGDLLEEVVKHFPD------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T + +DV +++A++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 167 ----TVDEEYGEDV-----------IRVALIGRPNVGKSSLVNAILGEERVIVSDMAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RD++ FE G+ ++DTAG +R K + SVM++ K + RA VV +V+D E
Sbjct: 212 RDAIDTPFEKDGQKYVIIDTAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVIDGEVG 271
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ V +VNK D++ + + Q+I+ +T P
Sbjct: 272 IIEQDKHVAGYAHEAGKAAVFVVNKWDIVEKDEKTM------HQFEQKIRDHFLFMTYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTY-QKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
VVF SA + + R+ + V++T + +R+PT LN + + + D+ + +I
Sbjct: 326 VVFLSA-KTKQRLHKLLPVVNTVSEAHAMRIPTHVLNDVVSDAVAINPPPTDKGRRMRIN 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPT + F++ + + + R+L ++ F G P+R+ R
Sbjct: 385 YATQVAVKPPTIIFFVNDPELMHFSYQRYLDNKIRAAFGFEGTPLRLFTR 434
>gi|417907892|ref|ZP_12551659.1| ribosome biogenesis GTPase Der [Staphylococcus capitis VCU116]
gi|341594979|gb|EGS37657.1| ribosome biogenesis GTPase Der [Staphylococcus capitis VCU116]
Length = 436
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 241/474 (50%), Gaps = 56/474 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+G+PNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGKPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM++VR GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IDEADVIIFMVNVREGLTQSDEMVAQMLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFGDP IS GLG+ +L +A+ VE++
Sbjct: 117 AVNKVDN-----PEMRNDIYDFYSLGFGDPYPISGSHGLGLGDLLDAV---VENF----- 163
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T+D P D+++ ++L+I+GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 164 -------GEETED---PYDEDT---IRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V + Y+G+ L+DTAG ++ K + SV+++ K + R++VV +++DAE+
Sbjct: 211 RDAVDTEYSYEGQDYVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVIIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + ++S K+ E V E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTV--EKDSKTMKKFTEDVRNEFQF----LDYAQ 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
+ F SA E + + + + R+ +S LN + + + + D+ + + Y
Sbjct: 325 IAFVSAKESLRLRTLFPYITEASENHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
TQV PPTFV F++ + + + R+L ++ F G PI I +PRK
Sbjct: 385 TTQVAIEPPTFVVFVNDVELMHFSYKRYLENQIRNAFGFEGTPIHI----IPRK 434
>gi|62181086|ref|YP_217503.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224582944|ref|YP_002636742.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|375115427|ref|ZP_09760597.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|81309623|sp|Q57LJ0.1|DER_SALCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783165|sp|C0PYN4.1|DER_SALPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|62128719|gb|AAX66422.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224467471|gb|ACN45301.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322715573|gb|EFZ07144.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 234/482 (48%), Gaps = 54/482 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDY-- 294
+ NK + L A + LG G+ I+A G G+ L E L P ++D
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAP 168
Query: 295 MLRVLNDS--CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+V D+ Q + +PEDD LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEKVDEDAEYWAQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E R L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 LLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ + V F SAL G G + V + Y R+ T+ L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDH----- 395
Query: 520 SAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
QP K+KY PP V + K L D+ R+L ++ ++ G PI
Sbjct: 396 --QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGTPI 453
Query: 572 RI 573
RI
Sbjct: 454 RI 455
>gi|297180284|gb|ADI16503.1| predicted GTPases [uncultured bacterium HF4000_05M23]
Length = 440
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 230/474 (48%), Gaps = 62/474 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + IIGRPNVGKS LFNRL RR A+V + P TRD A+ G R+ ++D+AG
Sbjct: 3 LPIIAIIGRPNVGKSTLFNRLAGRRIAIVSDIP--GTTRDRVSIDAEWGRHRYLLVDTAG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E + + D L + IF +DV G+ D + +R+ + +V
Sbjct: 61 VEDRPHNALLWDDIKKQVEIALNQADGIIFTVDVNEGVTDADEDAADMVRRACRPV--VV 118
Query: 240 AMNKCESLHNGTGSLAGAAAESLM-----LGFGDPIAISAETGLGMTELYEALRPSVEDY 294
A NK +SL A E L+ LG G+P ISA G+ +L EA+ ++
Sbjct: 119 AANKTDSL----------AREDLIYDFYSLGLGEPHPISAYHDSGIGDLMEAMFAAM--- 165
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLV 352
P + ES P +++AI GRPN GKS L NAL EDR +V
Sbjct: 166 --------------------PPFEPESMGPHSIRVAIAGRPNAGKSALFNALAGEDRAIV 205
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
P G TRD++ F+++G + +DTAG +R K E G S +++ + R++V L
Sbjct: 206 SPVPGTTRDTLDSQFDFEGTRITFLDTAGLRRRGKAEAGIEKYSAIRTIGAIERSYVSIL 265
Query: 412 VLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
VLDA E ++ R VV+VNK DL + K + +E++
Sbjct: 266 VLDATEFVTAQDTHIGGYIDDASRAAVVVVNKWDL------AYDLKLDRAEAEEEVKNRF 319
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKD-QS 520
+ +PVVFTSAL GRG ++ +I+ Y ++ ++P + ++R + MG + S
Sbjct: 320 KFIPDVPVVFTSALTGRGVNKLLPTIINVYGEFTKQIPRAEVSRAIFDAMGDNPMPGFGS 379
Query: 521 AQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRIT 574
+P+I Q + PPTF + + + R+L L+E+F G P++++
Sbjct: 380 RRPRIFRSVQSRTSPPTFEFTARNPELIHFSYRRYLENRLRENFGFIGSPLKMS 433
>gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555]
gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016]
gi|189037142|sp|A5N7W7.1|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783148|sp|B9E1C8.1|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555]
gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 438
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 244/474 (51%), Gaps = 61/474 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L +R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTP--GVTRDRVYAQAEWLNYNFTIIDTGGI 61
Query: 181 ETEATSGSI--LDRTAGM---TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQI 235
E E I + R A + TANV+ IF++D R GL D EV + LRK
Sbjct: 62 EPENNDVIISKMRRQAQVAIETANVI------IFIVDGREGLTAADKEVAQMLRKSK--- 112
Query: 236 KPIV-AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
KPIV +NK +++ E LG G+PI+ISA GLG+ ++ + L VE++
Sbjct: 113 KPIVLVVNKIDNMKQ-----ENYIYEFYNLGIGEPISISASQGLGLGDMLDKL---VENF 164
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
N +D ED E +++A +G+PNVGKS+L+N LL E+RV+V
Sbjct: 165 -----------KNEGNED----EDSEY---IKIAFIGKPNVGKSSLINKLLGEERVIVSD 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALVL 413
G TRD++ + E L+DTAG ++ K K SV+++ + RA V L+L
Sbjct: 207 IPGTTRDAIDSYLETDEGKFLLIDTAGVRRKSKVKEEIEKYSVIRTYTAVERADVCILML 266
Query: 414 DA--------EEV--RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA E++ A E + ++V++NK DL+ +++ + K ++ +
Sbjct: 267 DATHDISEQDEKIIGYAHELNKAIMVVINKWDLVD--KDTKTVNKYKTSIGSSLSF---- 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQ 522
++ P +F SA G+ + V + Y +C ++ T LN + K VM + + +
Sbjct: 321 MSYAPYLFISAKTGQRVNRIFKMVRECYDNYCKQIKTGILNDIIGKIVMMKEPPVVGNKR 380
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQ+ +PPTFV F++ K + + R++ L++ FD G I++ R
Sbjct: 381 LKIYYVTQIGTKPPTFVFFVNDSKCIHFSYRRYIENQLRDSFDFTGTGIKLEFR 434
>gi|56480123|ref|NP_708350.2| GTP-binding protein Der [Shigella flexneri 2a str. 301]
gi|161984887|ref|YP_408907.2| GTP-binding protein EngA [Shigella boydii Sb227]
gi|56383674|gb|AAN44057.2| putative GTP-binding factor [Shigella flexneri 2a str. 301]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ +NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVVNKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|306820449|ref|ZP_07454085.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402309399|ref|ZP_10828392.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
gi|304551524|gb|EFM39479.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400372366|gb|EJP25310.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
Length = 439
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 236/473 (49%), Gaps = 61/473 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ + ++V +TP VTRD F ++D+ G+E
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGEKISIVEDTP--GVTRDRIFADVNWLTYTFTLIDTGGIE 61
Query: 182 T--EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
T E +++ + A + ++ + +F++D ++GLHP D EVG LRK KP++
Sbjct: 62 TDTEEMIPAMMRKQAQVAIDM---SDVIMFVLDGKNGLHPQDFEVGTMLRKSK---KPVI 115
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE---ALRPSVEDYM 295
+NK + L + LGF D A+SA GLG+ +L + L P
Sbjct: 116 LVVNKVDG-----SKLPDDYYDFYQLGFDDMYAVSASQGLGIGDLLDEVVGLFP------ 164
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+D E+D+S +++AIVGRPN GKS++LNA++ E+R +V P
Sbjct: 165 ---------------KDELEIEEDDS---IKVAIVGRPNAGKSSILNAIIGEERTIVSPI 206
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD++ E G++ +DTAG ++ K SV++S + R VV +V+D
Sbjct: 207 AGTTRDAIDEKCEIDGKSYTFIDTAGIRKKNKIFDNIEKYSVLRSYTAIERCDVVLMVID 266
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
A E+ A E G+ +++++NK DL+ N+ +++ + +
Sbjct: 267 ATEMVSEQDTKIAGLAHEAGKPVIIVINKWDLIDKSTNTM------RDYTADVRNALAYM 320
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQP 523
+ F SA+ G+ ++ Q+ ++ RL T LN + V+ D+ +
Sbjct: 321 QYAKIEFVSAMTGKRLNNIITQIDYVLEQSKKRLSTGVLNDVIGDAVLHNQPPSDKGKRL 380
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
KI Y TQ +PPTFV F++ K+ + R+L ++E+F G IRI R
Sbjct: 381 KIYYATQAGVQPPTFVIFINDKELFHFSYKRYLENKIRENFGFDGTVIRIIAR 433
>gi|390445558|ref|ZP_10233297.1| GTP-binding protein engA [Nitritalea halalkaliphila LW7]
gi|389661760|gb|EIM73357.1| GTP-binding protein engA [Nitritalea halalkaliphila LW7]
Length = 437
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 229/469 (48%), Gaps = 53/469 (11%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS FNRL+ R+A+ N VTRD G A G F V+D+ G T
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNMS--GVTRDRHYGHATWGGKFFSVIDTGGYVT 62
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAM 241
+ + + +F++D GL LD E LR KPI V
Sbjct: 63 -GSDDVYESEIRKQVKLAIEEATVILFVVDCHDGLTDLDKEFANELRGTK---KPIYVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK ++ GS A L LG D I+A +G G +L + + ++D
Sbjct: 119 NKADTSDRILGS---AEFYGLGLGDNDVFPIAAVSGAGTGDLLDEVIKHLQD-------- 167
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+PED + +P ++AI+GRPNVGKS+ LNALL ++R +V EAG TRD
Sbjct: 168 ------------DAPEDPDEGIP-KIAILGRPNVGKSSFLNALLGKERSIVTNEAGTTRD 214
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREKEKGPASL-SVMQSRKNLMRAHVVALVLDAE---- 416
++ ++ G + DTAG ++ K K SVM+S + L + V+ +++DAE
Sbjct: 215 AIHTRYKLYGNDFIITDTAGIRKKAKVKEDIEFYSVMRSIRTLENSDVLIIIIDAERGLE 274
Query: 417 --EVRAVEEG----RGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+V + G +G++++VNK DL+ + + +E+ + + IP++
Sbjct: 275 AQDVNLINLGIKNNKGIMIMVNKWDLIEKDHKTM------DTFKKEMMDKLGENRWIPMI 328
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH---SWKDQSAQPKIKY 527
FTS +E + + + Y+ R+PTS+LN + + R+ +WK + +IKY
Sbjct: 329 FTSVVEKQRIFQAIELAVKVYENKTRRIPTSKLNDAMLAEIERYPPPAWKGKYI--RIKY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ+ + P F F + + L D R+L L+E F+ G+PI+IT +
Sbjct: 387 VTQLPTKNPVFAFFCNLPQYLRDPYTRYLENRLREHFEFDGVPIKITYK 435
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
+P + I+GRPNVGKS+ N L+ + ++V N + TRD KL F + D+AG
Sbjct: 177 IPKIAILGRPNVGKSSFLNALLGKERSIVTN--EAGTTRDAIHTRYKLYGNDFIITDTAG 234
Query: 180 LETEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEV 224
+ +A ++ + M + L + I +ID GL D+ +
Sbjct: 235 IRKKAKVKEDIEFYSVMRSIRTLENSDVLIIIIDAERGLEAQDVNL 280
>gi|423104266|ref|ZP_17091968.1| GTPase Der [Klebsiella oxytoca 10-5242]
gi|423125182|ref|ZP_17112861.1| GTPase Der [Klebsiella oxytoca 10-5250]
gi|376384129|gb|EHS96855.1| GTPase Der [Klebsiella oxytoca 10-5242]
gi|376399433|gb|EHT12048.1| GTPase Der [Klebsiella oxytoca 10-5250]
Length = 492
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 235/484 (48%), Gaps = 56/484 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM- 295
+ NK + + A A+ LG G+ I+A G G+T L E L P V++
Sbjct: 114 FLVANKTDGIDADQ-----AIADFWSLGLGEIYPIAASHGRGVTSLLEHVLLPWVDEVNP 168
Query: 296 -LRVLNDSCT----QNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQED 348
V D+ + + + V PEDD LP++LAIVGRPNVGKSTL N +L ED
Sbjct: 169 PEEVDEDAAYWAQFEAEQNGEAVEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGED 228
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAH 407
RV+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+
Sbjct: 229 RVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDAN 288
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 VVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 341 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVGTAMLTRIMTMAAEDH--- 397
Query: 518 DQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
QP K+KY PP V + K L D+ R+L ++ ++ G
Sbjct: 398 ----QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGT 453
Query: 570 PIRI 573
PIRI
Sbjct: 454 PIRI 457
>gi|397905173|ref|ZP_10506044.1| GTP-binding protein EngA [Caloramator australicus RC3]
gi|397161822|emb|CCJ33378.1| GTP-binding protein EngA [Caloramator australicus RC3]
Length = 439
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 238/471 (50%), Gaps = 53/471 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFN+L+ +R ++V +TP VTRD + + RF ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLVGKRISIVEDTP--GVTRDRIYAEVEWLNYRFTLVDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAI-FMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E S I+ + A + +T I FM+D + GL D+EV + LR+ KP+V
Sbjct: 62 EPE--SEDIILKQMKRQAQIAIETADVILFMVDGKEGLTATDIEVAEMLRRVK---KPVV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK ++L L E LG G+PI ISA LG+ ++ + + +D
Sbjct: 117 LVVNKIDNLK-----LEDNKFEFYSLGLGEPITISAALSLGIGDMLDEIVKYFKD----- 166
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
DDE + +++AIVG+PNVGKS+LLN L E+R +V G
Sbjct: 167 ----------------KEADDEEEPLIKVAIVGKPNVGKSSLLNRLTGEERAIVSDIPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGP-ASLSVMQSRKNLMRAHVVALVLDA-- 415
TRD++ E G +DTAG ++ K K SV++S + RA V +++DA
Sbjct: 211 TRDAIDSLVEINGEKFLFIDTAGIRRKSKIKEEIEKYSVIRSLAAIDRADVCLIMIDATE 270
Query: 416 ------EEVRAV--EEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
E++ + E G+G+V++VNK DL+ + +I+T + +T
Sbjct: 271 GVTEQDEKIAGIAHEAGKGIVIVVNKWDLIEKDDKTM------NEYNNKIRTALSFMTYA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIK 526
P+++ SA G+ ++ + + +R+ T LN + + VM R ++ KI
Sbjct: 325 PIIYISAKTGQRVTKLIDLIKYVADQNAMRVKTGILNEVISEAVMLRQPPVEKGKALKIY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
Y TQV +PPTF F++ ++ + + R+L +++ F G PIR+ +S
Sbjct: 385 YATQVLTKPPTFAIFVNDEEIVHFSYDRYLENQIRQHFGFEGTPIRLVYKS 435
>gi|417286436|ref|ZP_12073725.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
gi|386249895|gb|EII96064.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDQDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|421873079|ref|ZP_16304695.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
gi|372458025|emb|CCF14244.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
Length = 437
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 236/472 (50%), Gaps = 55/472 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP V I+GRPNVGKS +FNRLI R A+V + P VTRD + + F V+D+ G
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPG--VTRDRLYAKGEWLNREFHVIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
+E A + IL + + + I ++DVRSG+ DL V + L + KPIV
Sbjct: 61 IEF-AETDQILTQMRYQAELAIDEADVIILIVDVRSGVTDADLNVARMLNRTG---KPIV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
A+NK ++ + E LG G+P IS GLG+ ++ + + +
Sbjct: 117 LAVNKVDNFE-----MRNDIYEFYQLGVGEPFPISGSHGLGLGDMLDEVFHHL------- 164
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLP--LQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
P D+E K ++++I+GRPNVGKS+L NA+L E+RV+V A
Sbjct: 165 ----------------PPVDEEEKRDDVIRVSIIGRPNVGKSSLTNAILGEERVIVSEIA 208
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G TRD++ F G+ LVDTAG ++ K +G SVM++ K + + VV +V++
Sbjct: 209 GTTRDAIDTPFVRDGQEYVLVDTAGMRKKGKVYEGTEKYSVMRALKAIEDSDVVLVVING 268
Query: 416 EE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
EE A E GRG++++VNK D L ++ +R E + +E + ++
Sbjct: 269 EEGIIEQDKKIAGYAHEAGRGVIIVVNKWDALE--KDDKTMQRFTELIREEFK----YLS 322
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPK 524
P+++ SA + ++ +V +R+ TS LN + + D+ + K
Sbjct: 323 YAPILYVSAKTKQRVHTILPKVNAVADSHSMRVNTSVLNDLITDATIMAPPPTDRGKRLK 382
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
I Y TQV +PPTF+ F++ + + + R+L ++ F+ G PIRI R
Sbjct: 383 INYTTQVAVKPPTFIVFVNDPELMHFSYERYLENKIRGAFEFEGTPIRILTR 434
>gi|119964121|ref|YP_947439.1| GTP-binding protein EngA [Arthrobacter aurescens TC1]
gi|254783134|sp|A1R5C7.1|DER_ARTAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119950980|gb|ABM09891.1| putative GTP-binding protein Era [Arthrobacter aurescens TC1]
Length = 491
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 229/473 (48%), Gaps = 53/473 (11%)
Query: 117 INLLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLD 176
+ L P + IIGRPNVGKS L NR++ RREA+V +TP VTRD A+ F ++D
Sbjct: 50 LKLDPVLAIIGRPNVGKSTLVNRILGRREAVVEDTP--GVTRDRVMYSARWNGRNFTLVD 107
Query: 177 SAGLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIK 236
+ G E +A I R A + +F++D G D V K LRK K
Sbjct: 108 TGGWEHDAKG--IHARVAEQAEMAVELADAVLFVVDSAVGATATDEGVMKMLRKSK---K 162
Query: 237 PIVAM-NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYM 295
P++ + NK + S A LGFG+P +SA G G+ +L + + ++ +Y
Sbjct: 163 PVIMVANKVDDFAQEADS-----ATLWGLGFGEPYPVSALHGRGVADLLDHVMDTLPEYS 217
Query: 296 LRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
L D ++ P ++A++GRPNVGKS+LLN L +RV+V P
Sbjct: 218 L---VDGVERSGG---------------PRRIALIGRPNVGKSSLLNKLAGSERVVVDPL 259
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLD 414
AG TRD V E RT VDTAG +R+ +G + ++++ L +A V ++L
Sbjct: 260 AGTTRDPVDEFIELGDRTWRFVDTAGIRRRQHMAQGADFYASLRTQAALEKAEVAVVLLA 319
Query: 415 AEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
+EV A+E GR LV+ NK DLL + L + EI+ + V
Sbjct: 320 VDEVLSEQDVRILQLAIESGRALVLAFNKWDLLDDERRRYLER--------EIEQDLAHV 371
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA-QP 523
P V SA G + ++ + + W R+PT RLN +L +++ H + QP
Sbjct: 372 EWAPRVNISAKTGWHKDRLVPALDIALESWDRRIPTGRLNAFLGELVAAHPHPVRGGKQP 431
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+I + TQ +RPP FV F +G L RF+T+ L+E F G PI + R
Sbjct: 432 RILFGTQASSRPPKFVLFTTG--FLDPGYRRFITRRLRETFGFEGTPIEVNMR 482
>gi|379720895|ref|YP_005313026.1| protein EngA [Paenibacillus mucilaginosus 3016]
gi|378569567|gb|AFC29877.1| EngA [Paenibacillus mucilaginosus 3016]
Length = 440
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 235/470 (50%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P + I+GRPNVGKS +FNR+I + A+V + P VTRD G + D F ++D+ G+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPG--VTRDRLYGRGEWLDQEFSIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWL-RKHAPQIKPIV 239
E E IL + + IFM+D ++G+ P D EV + L R P + V
Sbjct: 62 EIEGED-HILRSVRVQAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRSQKPVV---V 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++L A E +GFG+ + IS G G+ +L E + D
Sbjct: 118 AVNKVDNLQR-----ADDIYEFYSMGFGEIVGISGAHGTGIGDLLEEVVKHFPD------ 166
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
T + +DV +++A++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 167 ----TVDEEYGEDV-----------IRVALIGRPNVGKSSLVNAILGEERVIVSDMAGTT 211
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE-- 416
RD++ FE G+ ++DTAG +R K + SVM++ K + RA VV +V+D E
Sbjct: 212 RDAIDTPFEKDGQKYVIIDTAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVIDGEVG 271
Query: 417 --------EVRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ V +VNK D++ + + Q+I+ +T P
Sbjct: 272 IIEQDKHVAGYAHEAGKAAVFVVNKWDVVEKDEKTM------HQFEQKIRDHFLFMTYAP 325
Query: 469 VVFTSALEGRGRIAVMHQVIDTY-QKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
VVF SA + + R+ + V++T + +R+PT LN + + + D+ + +I
Sbjct: 326 VVFLSA-KTKQRLHKLLPVVNTVSEAHAMRIPTHVLNDVVSDAVAINPPPTDKGRRMRIN 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPT + F++ + + + R+L ++ F G P+R+ R
Sbjct: 385 YATQVAVKPPTIIFFVNDPELMHFSYQRYLDNKIRAAFGFEGTPLRLFTR 434
>gi|422780588|ref|ZP_16833373.1| ribosome GTPase EngA [Escherichia coli TW10509]
gi|323977306|gb|EGB72392.1| ribosome GTPase EngA [Escherichia coli TW10509]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDIAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRI 455
>gi|432441977|ref|ZP_19684317.1| GTPase Der [Escherichia coli KTE189]
gi|432447083|ref|ZP_19689382.1| GTPase Der [Escherichia coli KTE191]
gi|432617653|ref|ZP_19853766.1| GTPase Der [Escherichia coli KTE75]
gi|432899588|ref|ZP_20110177.1| GTPase Der [Escherichia coli KTE192]
gi|433014793|ref|ZP_20203135.1| GTPase Der [Escherichia coli KTE104]
gi|433024365|ref|ZP_20212346.1| GTPase Der [Escherichia coli KTE106]
gi|433029449|ref|ZP_20217305.1| GTPase Der [Escherichia coli KTE109]
gi|433199168|ref|ZP_20383065.1| GTPase Der [Escherichia coli KTE94]
gi|433322943|ref|ZP_20400332.1| GTP-binding protein Der [Escherichia coli J96]
gi|430966431|gb|ELC83839.1| GTPase Der [Escherichia coli KTE189]
gi|430973356|gb|ELC90324.1| GTPase Der [Escherichia coli KTE191]
gi|431153641|gb|ELE54545.1| GTPase Der [Escherichia coli KTE75]
gi|431425717|gb|ELH07785.1| GTPase Der [Escherichia coli KTE192]
gi|431529779|gb|ELI06474.1| GTPase Der [Escherichia coli KTE104]
gi|431534426|gb|ELI10909.1| GTPase Der [Escherichia coli KTE106]
gi|431542501|gb|ELI17668.1| GTPase Der [Escherichia coli KTE109]
gi|431720553|gb|ELJ84580.1| GTPase Der [Escherichia coli KTE94]
gi|432348516|gb|ELL42966.1| GTP-binding protein Der [Escherichia coli J96]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 233/475 (49%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|110642676|ref|YP_670406.1| GTP-binding protein EngA [Escherichia coli 536]
gi|161486155|ref|NP_754915.2| GTP-binding protein EngA [Escherichia coli CFT073]
gi|191172582|ref|ZP_03034121.1| ribosome-associated GTPase EngA [Escherichia coli F11]
gi|218701021|ref|YP_002408650.1| GTP-binding protein EngA [Escherichia coli IAI39]
gi|312965427|ref|ZP_07779659.1| small GTP-binding domain protein [Escherichia coli 2362-75]
gi|386620118|ref|YP_006139698.1| putative GTP-binding protein [Escherichia coli NA114]
gi|386625248|ref|YP_006144976.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
CE10]
gi|386640042|ref|YP_006106840.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
gi|387830408|ref|YP_003350345.1| putative GTP-binding protein [Escherichia coli SE15]
gi|415840210|ref|ZP_11521699.1| small GTP-binding domain protein [Escherichia coli RN587/1]
gi|416335665|ref|ZP_11672358.1| GTP-binding protein EngA [Escherichia coli WV_060327]
gi|417281586|ref|ZP_12068886.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
gi|417663068|ref|ZP_12312649.1| GTP-binding protein EngA [Escherichia coli AA86]
gi|417756768|ref|ZP_12404842.1| small GTP-binding domain protein [Escherichia coli DEC2B]
gi|418997396|ref|ZP_13544990.1| small GTP-binding domain protein [Escherichia coli DEC1A]
gi|419003065|ref|ZP_13550589.1| small GTP-binding domain protein [Escherichia coli DEC1B]
gi|419008748|ref|ZP_13556179.1| small GTP-binding domain protein [Escherichia coli DEC1C]
gi|419014422|ref|ZP_13561770.1| GTPase Der [Escherichia coli DEC1D]
gi|419019440|ref|ZP_13566746.1| small GTP-binding domain protein [Escherichia coli DEC1E]
gi|419024940|ref|ZP_13572166.1| GTPase Der [Escherichia coli DEC2A]
gi|419029977|ref|ZP_13577138.1| small GTP-binding domain protein [Escherichia coli DEC2C]
gi|419035402|ref|ZP_13582488.1| small GTP-binding domain protein [Escherichia coli DEC2D]
gi|419040663|ref|ZP_13587691.1| small GTP-binding domain protein [Escherichia coli DEC2E]
gi|419914739|ref|ZP_14433127.1| GTP-binding protein EngA [Escherichia coli KD1]
gi|425278912|ref|ZP_18670150.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
gi|425301366|ref|ZP_18691257.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
gi|432398467|ref|ZP_19641246.1| GTPase Der [Escherichia coli KTE25]
gi|432407592|ref|ZP_19650300.1| GTPase Der [Escherichia coli KTE28]
gi|432412684|ref|ZP_19655346.1| GTPase Der [Escherichia coli KTE39]
gi|432422863|ref|ZP_19665407.1| GTPase Der [Escherichia coli KTE178]
gi|432432760|ref|ZP_19675187.1| GTPase Der [Escherichia coli KTE187]
gi|432437243|ref|ZP_19679631.1| GTPase Der [Escherichia coli KTE188]
gi|432457583|ref|ZP_19699765.1| GTPase Der [Escherichia coli KTE201]
gi|432466700|ref|ZP_19708787.1| GTPase Der [Escherichia coli KTE205]
gi|432471838|ref|ZP_19713882.1| GTPase Der [Escherichia coli KTE206]
gi|432496579|ref|ZP_19738375.1| GTPase Der [Escherichia coli KTE214]
gi|432501003|ref|ZP_19742760.1| GTPase Der [Escherichia coli KTE216]
gi|432505322|ref|ZP_19747045.1| GTPase Der [Escherichia coli KTE220]
gi|432524716|ref|ZP_19761843.1| GTPase Der [Escherichia coli KTE230]
gi|432554558|ref|ZP_19791279.1| GTPase Der [Escherichia coli KTE47]
gi|432559726|ref|ZP_19796395.1| GTPase Der [Escherichia coli KTE49]
gi|432569605|ref|ZP_19806115.1| GTPase Der [Escherichia coli KTE53]
gi|432584726|ref|ZP_19821118.1| GTPase Der [Escherichia coli KTE57]
gi|432593737|ref|ZP_19830052.1| GTPase Der [Escherichia coli KTE60]
gi|432608405|ref|ZP_19844589.1| GTPase Der [Escherichia coli KTE67]
gi|432652045|ref|ZP_19887798.1| GTPase Der [Escherichia coli KTE87]
gi|432695330|ref|ZP_19930528.1| GTPase Der [Escherichia coli KTE162]
gi|432711531|ref|ZP_19946589.1| GTPase Der [Escherichia coli KTE6]
gi|432714251|ref|ZP_19949288.1| GTPase Der [Escherichia coli KTE8]
gi|432723987|ref|ZP_19958904.1| GTPase Der [Escherichia coli KTE17]
gi|432728568|ref|ZP_19963446.1| GTPase Der [Escherichia coli KTE18]
gi|432742252|ref|ZP_19976971.1| GTPase Der [Escherichia coli KTE23]
gi|432784436|ref|ZP_20018615.1| GTPase Der [Escherichia coli KTE63]
gi|432845473|ref|ZP_20078273.1| GTPase Der [Escherichia coli KTE141]
gi|432895485|ref|ZP_20107205.1| GTPase Der [Escherichia coli KTE165]
gi|432920490|ref|ZP_20124125.1| GTPase Der [Escherichia coli KTE173]
gi|432928087|ref|ZP_20129340.1| GTPase Der [Escherichia coli KTE175]
gi|432974672|ref|ZP_20163509.1| GTPase Der [Escherichia coli KTE209]
gi|432981890|ref|ZP_20170665.1| GTPase Der [Escherichia coli KTE211]
gi|432991618|ref|ZP_20180282.1| GTPase Der [Escherichia coli KTE217]
gi|432996227|ref|ZP_20184813.1| GTPase Der [Escherichia coli KTE218]
gi|433000798|ref|ZP_20189322.1| GTPase Der [Escherichia coli KTE223]
gi|433058997|ref|ZP_20246040.1| GTPase Der [Escherichia coli KTE124]
gi|433073740|ref|ZP_20260391.1| GTPase Der [Escherichia coli KTE129]
gi|433078691|ref|ZP_20265219.1| GTPase Der [Escherichia coli KTE131]
gi|433088204|ref|ZP_20274574.1| GTPase Der [Escherichia coli KTE137]
gi|433097332|ref|ZP_20283515.1| GTPase Der [Escherichia coli KTE139]
gi|433106776|ref|ZP_20292748.1| GTPase Der [Escherichia coli KTE148]
gi|433111752|ref|ZP_20297613.1| GTPase Der [Escherichia coli KTE150]
gi|433116410|ref|ZP_20302199.1| GTPase Der [Escherichia coli KTE153]
gi|433121070|ref|ZP_20306740.1| GTPase Der [Escherichia coli KTE157]
gi|433126080|ref|ZP_20311635.1| GTPase Der [Escherichia coli KTE160]
gi|433140148|ref|ZP_20325401.1| GTPase Der [Escherichia coli KTE167]
gi|433150065|ref|ZP_20335083.1| GTPase Der [Escherichia coli KTE174]
gi|433184215|ref|ZP_20368460.1| GTPase Der [Escherichia coli KTE85]
gi|433208644|ref|ZP_20392318.1| GTPase Der [Escherichia coli KTE97]
gi|433213428|ref|ZP_20397018.1| GTPase Der [Escherichia coli KTE99]
gi|442608257|ref|ZP_21023017.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
gi|31563151|sp|Q8FF59.2|DER_ECOL6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123147831|sp|Q0TEX4.1|DER_ECOL5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741137|sp|B7NQW0.1|DER_ECO7I RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110344268|gb|ABG70505.1| probable GTP-binding protein EngA [Escherichia coli 536]
gi|190907055|gb|EDV66655.1| ribosome-associated GTPase EngA [Escherichia coli F11]
gi|218371007|emb|CAR18835.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli IAI39]
gi|281179565|dbj|BAI55895.1| putative GTP-binding protein [Escherichia coli SE15]
gi|307554534|gb|ADN47309.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
gi|312289847|gb|EFR17735.1| small GTP-binding domain protein [Escherichia coli 2362-75]
gi|320196348|gb|EFW70972.1| GTP-binding protein EngA [Escherichia coli WV_060327]
gi|323188371|gb|EFZ73663.1| small GTP-binding domain protein [Escherichia coli RN587/1]
gi|330912286|gb|EGH40796.1| GTP-binding protein EngA [Escherichia coli AA86]
gi|333970619|gb|AEG37424.1| putative GTP-binding protein [Escherichia coli NA114]
gi|349738985|gb|AEQ13691.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
CE10]
gi|377843223|gb|EHU08263.1| small GTP-binding domain protein [Escherichia coli DEC1A]
gi|377844266|gb|EHU09303.1| small GTP-binding domain protein [Escherichia coli DEC1C]
gi|377846668|gb|EHU11675.1| small GTP-binding domain protein [Escherichia coli DEC1B]
gi|377856390|gb|EHU21250.1| GTPase Der [Escherichia coli DEC1D]
gi|377859443|gb|EHU24274.1| small GTP-binding domain protein [Escherichia coli DEC1E]
gi|377863724|gb|EHU28529.1| GTPase Der [Escherichia coli DEC2A]
gi|377873342|gb|EHU37979.1| small GTP-binding domain protein [Escherichia coli DEC2B]
gi|377876977|gb|EHU41575.1| small GTP-binding domain protein [Escherichia coli DEC2C]
gi|377879758|gb|EHU44330.1| small GTP-binding domain protein [Escherichia coli DEC2D]
gi|377890703|gb|EHU55160.1| small GTP-binding domain protein [Escherichia coli DEC2E]
gi|386245915|gb|EII87645.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
gi|388385709|gb|EIL47380.1| GTP-binding protein EngA [Escherichia coli KD1]
gi|408200544|gb|EKI25721.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
gi|408212758|gb|EKI37271.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
gi|430914715|gb|ELC35810.1| GTPase Der [Escherichia coli KTE25]
gi|430929066|gb|ELC49587.1| GTPase Der [Escherichia coli KTE28]
gi|430934539|gb|ELC54894.1| GTPase Der [Escherichia coli KTE39]
gi|430943599|gb|ELC63706.1| GTPase Der [Escherichia coli KTE178]
gi|430952128|gb|ELC71335.1| GTPase Der [Escherichia coli KTE187]
gi|430962574|gb|ELC80431.1| GTPase Der [Escherichia coli KTE188]
gi|430981590|gb|ELC98317.1| GTPase Der [Escherichia coli KTE201]
gi|430992983|gb|ELD09342.1| GTPase Der [Escherichia coli KTE205]
gi|430997580|gb|ELD13841.1| GTPase Der [Escherichia coli KTE206]
gi|431023837|gb|ELD37032.1| GTPase Der [Escherichia coli KTE214]
gi|431028580|gb|ELD41624.1| GTPase Der [Escherichia coli KTE216]
gi|431037672|gb|ELD48648.1| GTPase Der [Escherichia coli KTE220]
gi|431051167|gb|ELD60842.1| GTPase Der [Escherichia coli KTE230]
gi|431083223|gb|ELD89530.1| GTPase Der [Escherichia coli KTE47]
gi|431090946|gb|ELD96697.1| GTPase Der [Escherichia coli KTE49]
gi|431099095|gb|ELE04396.1| GTPase Der [Escherichia coli KTE53]
gi|431115480|gb|ELE18983.1| GTPase Der [Escherichia coli KTE57]
gi|431127065|gb|ELE29380.1| GTPase Der [Escherichia coli KTE60]
gi|431137349|gb|ELE39196.1| GTPase Der [Escherichia coli KTE67]
gi|431189900|gb|ELE89317.1| GTPase Der [Escherichia coli KTE87]
gi|431233418|gb|ELF29009.1| GTPase Der [Escherichia coli KTE162]
gi|431248483|gb|ELF42677.1| GTPase Der [Escherichia coli KTE6]
gi|431256101|gb|ELF49178.1| GTPase Der [Escherichia coli KTE8]
gi|431264579|gb|ELF56284.1| GTPase Der [Escherichia coli KTE17]
gi|431273120|gb|ELF64218.1| GTPase Der [Escherichia coli KTE18]
gi|431283943|gb|ELF74802.1| GTPase Der [Escherichia coli KTE23]
gi|431328859|gb|ELG16163.1| GTPase Der [Escherichia coli KTE63]
gi|431394329|gb|ELG77865.1| GTPase Der [Escherichia coli KTE141]
gi|431421852|gb|ELH04064.1| GTPase Der [Escherichia coli KTE165]
gi|431441692|gb|ELH22800.1| GTPase Der [Escherichia coli KTE173]
gi|431443052|gb|ELH24130.1| GTPase Der [Escherichia coli KTE175]
gi|431488404|gb|ELH68039.1| GTPase Der [Escherichia coli KTE209]
gi|431491199|gb|ELH70806.1| GTPase Der [Escherichia coli KTE211]
gi|431495700|gb|ELH75286.1| GTPase Der [Escherichia coli KTE217]
gi|431505257|gb|ELH83879.1| GTPase Der [Escherichia coli KTE218]
gi|431508190|gb|ELH86464.1| GTPase Der [Escherichia coli KTE223]
gi|431568530|gb|ELI41503.1| GTPase Der [Escherichia coli KTE124]
gi|431587108|gb|ELI58489.1| GTPase Der [Escherichia coli KTE129]
gi|431595815|gb|ELI65802.1| GTPase Der [Escherichia coli KTE131]
gi|431603981|gb|ELI73397.1| GTPase Der [Escherichia coli KTE137]
gi|431614913|gb|ELI84047.1| GTPase Der [Escherichia coli KTE139]
gi|431626484|gb|ELI95033.1| GTPase Der [Escherichia coli KTE148]
gi|431627495|gb|ELI95897.1| GTPase Der [Escherichia coli KTE150]
gi|431633231|gb|ELJ01512.1| GTPase Der [Escherichia coli KTE153]
gi|431641770|gb|ELJ09504.1| GTPase Der [Escherichia coli KTE157]
gi|431643592|gb|ELJ11283.1| GTPase Der [Escherichia coli KTE160]
gi|431659152|gb|ELJ26050.1| GTPase Der [Escherichia coli KTE167]
gi|431669859|gb|ELJ36224.1| GTPase Der [Escherichia coli KTE174]
gi|431705312|gb|ELJ69909.1| GTPase Der [Escherichia coli KTE85]
gi|431729929|gb|ELJ93548.1| GTPase Der [Escherichia coli KTE97]
gi|431734453|gb|ELJ97854.1| GTPase Der [Escherichia coli KTE99]
gi|441710862|emb|CCQ08994.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|420366700|ref|ZP_14867533.1| GTPase Der [Shigella flexneri 1235-66]
gi|391324007|gb|EIQ80622.1| GTPase Der [Shigella flexneri 1235-66]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 230/474 (48%), Gaps = 38/474 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI 238
G++ T + R A + + + +FM+D R+GL P D + K LR A Q
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLR--ARQKPTF 114
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYMLR 297
+ NK + L A + LG G+ I+A G G+ L E L P ++D +
Sbjct: 115 LVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQ 169
Query: 298 VLNDS----CTQNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
D Q + PEDD LP++LAIVGRPNVGKSTL N +L EDRV+
Sbjct: 170 EEVDEDAEYWAQLEAKENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 229
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
V G TRDS+ + + R L+DTAG +R K + SV+++ + + A+VV
Sbjct: 230 VYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVM 289
Query: 411 LVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
LV+DA E + ++ GR LV++VNK D L + VKE V + +
Sbjct: 290 LVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWD--------GLTQEVKEQVKETLDFR 341
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-DQ 519
+ + V F SAL G G + V + Y R+ T+ L R + H +
Sbjct: 342 LGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAAEDHQPPLVR 401
Query: 520 SAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY PP V + K L D+ R+L ++ ++ G PIRI
Sbjct: 402 GRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGTPIRI 455
>gi|359411359|ref|ZP_09203824.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
gi|357170243|gb|EHI98417.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
Length = 438
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 237/470 (50%), Gaps = 53/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS LFNRL +R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTP--GVTRDRVYAEAEWLNYSFTMIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKT-QFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV 239
E E I+ + AN+ +T +F++D + GL P D EV LRK KP+V
Sbjct: 62 EPE--RDDIIVKQMRRQANIAIETADVIVFIVDGKEGLTPADNEVAAMLRKSK---KPVV 116
Query: 240 -AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+NK +SL A E LG GDP+ ISA GLG+ ++ + + +++
Sbjct: 117 LVVNKVDSLKEEDN-----AWEFYNLGIGDPVTISASQGLGLGDMLDKVVENID------ 165
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ V E+DE +++A++G+PNVGKS+L+N LL E+RV+V G
Sbjct: 166 ------------KSVYEEEEDEY---IRIAMIGKPNVGKSSLINKLLGEERVIVSDVPGT 210
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ + E + L+DTAG ++ K K SV+++ + RA V L++DA E
Sbjct: 211 TRDAIDSYLETENGKFILIDTAGLRRKSKVKEEIERYSVVRTYAAIERADVCILMIDATE 270
Query: 418 ----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
A E + ++VIVNK DL+ + + L K +++Q + ++
Sbjct: 271 GITEQDEKIIGYAHEMRKAIMVIVNKWDLVE-KDDKTLDK-----FKKDLQQNLKFLSYA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRK-VMGRHSWKDQSAQPKIK 526
+F SAL G+ V+ Y + R+ T LN + K V+ + + KI
Sbjct: 325 EYLFISALTGQRVGKVLDIAKYCYDNYNKRISTGILNDVISKAVLMKEPPVVSLKRMKIY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV RPP FV F++ + T + R+L L+ FD G I+I R
Sbjct: 385 YVTQVATRPPKFVFFVNDESTRQFSYERYLENQLRNSFDFKGTGIQIEYR 434
>gi|343501753|ref|ZP_08739622.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|418481164|ref|ZP_13050212.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342816878|gb|EGU51770.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|384571116|gb|EIF01654.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 495
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 247/518 (47%), Gaps = 74/518 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + LRK KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG + I+A G G+ L + AL P E
Sbjct: 114 MLVVNKVDGI-----DADAASADFWQLGVENMYQIAAAHGRGVGALIDRALNPFAEKM-- 166
Query: 297 RVLNDSCTQNNSSTQDVTS-PEDDESKL-----------------PLQLAIVGRPNVGKS 338
+ +D+T +++E KL P++LAI+GRPNVGKS
Sbjct: 167 ------AEEAQGEIEDLTEFVDEEEEKLDYTEEEAEEEFKRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R++ + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVLAVNKWD--------GLDM 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMATDDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVNELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRITQRSVPRKCGSSSSRQNTGQKVGR 597
++ ++ G PIRI +S S++ Q+ R
Sbjct: 446 YRKSLEIMGTPIRIQFQSSDNPFEGKSNKMTMSQERKR 483
>gi|417828922|ref|ZP_12475473.1| small GTP-binding domain protein [Shigella flexneri J1713]
gi|335574777|gb|EGM61095.1| small GTP-binding domain protein [Shigella flexneri J1713]
Length = 490
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKADGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|404418697|ref|ZP_11000464.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
gi|403489290|gb|EJY94868.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
Length = 436
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 241/475 (50%), Gaps = 58/475 (12%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR++ R ++V +TP VTRD + F ++D+ G+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTP--GVTRDRIYSTGEWLTHDFNIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E R A + + IFM+++R GL D V + L K KP+V
Sbjct: 62 EIGDAPFQTQIRAQAEIA--IDEADVIIFMVNIREGLTQSDEIVAQLLYKSK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L +A+ +
Sbjct: 117 AVNKVDN-----PEMRNEIYDFYALGFGEPYPISGSHGLGLGDLLDAVVTHFK------- 164
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
+DV P D+++ ++L+I+GRPNVGKS+L+NA+L EDRV+V AG T
Sbjct: 165 -----------EDVEDPYDEDT---IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V + Y + L+DTAG ++ K + SV+++ K + R++VV +V+DAE+
Sbjct: 211 RDAVDTEYSYDDQNFVLIDTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A EEG+ +V++VNK D + N+ K+ K+ V +E Q +
Sbjct: 271 IIEQDKRVAGYAHEEGKAIVIVVNKWDTVDKETNTM--KKFKDEVRKEFQF----LDYAE 324
Query: 469 VVFTSALEGRGRIAVMHQVI-DTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIK 526
+ F SA E R R+ + I + + R+ +S LN + + + + D+ + +
Sbjct: 325 IAFVSAKE-RQRLKTLFPYIKEASENHKKRVKSSTLNEVVTDAISMNPTPTDKGRRLNVF 383
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRK 581
Y TQV PPTF+ F++ + + + R+L +++ F G P+ I +PRK
Sbjct: 384 YATQVAIEPPTFIIFVNDVELMHFSYKRYLENQIRDAFGFEGTPVHI----LPRK 434
>gi|167893952|ref|ZP_02481354.1| GTP-binding protein EngA [Burkholderia pseudomallei 7894]
Length = 454
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 226/460 (49%), Gaps = 49/460 (10%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G E A G IL
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGFEPVAKDG-IL 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAMNKCESLHN 249
A T + + +F++D R+GL P D + +LRK +PI + +NK E +
Sbjct: 58 HEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFLVVNKAEGM-- 112
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSS 309
A++ LG GDP AISA G G+ ++ +N++ +
Sbjct: 113 ---KYTAVASDFYELGLGDPRAISAAHGDGVNDM---------------INEAL--EVAY 152
Query: 310 TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 369
+ E+ + +++AIVGRPNVGKSTL+N L+ EDRV+ G TRDS+ V FE
Sbjct: 153 AGEPQESEEAAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFER 212
Query: 370 QGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVRA-------- 420
G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA + +
Sbjct: 213 NGKHYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAG 272
Query: 421 --VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGR 478
VE+GR LVV VNK D L V+E ++ + + F SA E
Sbjct: 273 FVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLEFAKFHFISAAEKT 324
Query: 479 GRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYFTQVKARPPT 537
G A+M V D Y +LPT +L R L V + + +PK++Y Q PP
Sbjct: 325 GIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPI 384
Query: 538 FVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
V + +++ R+L +E F L G P+RI RS
Sbjct: 385 IVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 424
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSAGLE 181
+ I+GRPNVGKS L N LI + ++ P TRD I + G + ++D+AGL
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPG--TTRDSIYVDFERNGK-HYTLIDTAGLR 226
Query: 182 TEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+++ + + T ++ I ++D R + D + ++ + + +V
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRAL--VVG 284
Query: 241 MNKCESL--HNGTGSLAGAAAESLMLGFGDPIAISA--ETGLGMTELYEALRPSVED 293
+NK + L H + A A + L F ISA +TG+G AL SV+D
Sbjct: 285 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIG------ALMRSVDD 335
>gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
Length = 495
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 238/494 (48%), Gaps = 74/494 (14%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G AKLG+ F V+D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGQAKLGEHEFIVIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + + A + + + +FM+D R+GL P D+ + LRK KP
Sbjct: 59 GID--GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIE---KPS 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
++ +NK + + A+A+ LG I+A G G+ L + AL P E
Sbjct: 114 MLVVNKVDGI-----DADAASADFWQLGVESMYQIAAAHGRGVGALIDRALNPFAEKM-- 166
Query: 297 RVLNDSCTQNNSSTQDVTS-PEDDESKL-----------------PLQLAIVGRPNVGKS 338
+ +D+T ++DE KL P++LAI+GRPNVGKS
Sbjct: 167 ------AEEARGEIEDLTDFIDEDEEKLDYTEEEAEAEFKRLQDQPIKLAIIGRPNVGKS 220
Query: 339 TLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVM 397
TL N +L E+RV+V G TRDS+ + E GR L+DTAG +R++ + SV+
Sbjct: 221 TLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVV 280
Query: 398 QSRKNLMRAHVVALVLDAEEV----------RAVEEGRGLVVIVNKMDLLSGRQNSALYK 447
++ K + A+VV LV+DA E A+ GR +V+ VNK D L
Sbjct: 281 KTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRSIVIAVNKWD--------GLDM 332
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
VKE V +E+ + V + F SAL G G + V + Y+ R+ TS L R +
Sbjct: 333 DVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIM 392
Query: 508 RKVMGRHSWKDQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
+ H QP K+KY PP V + L D+ R+L
Sbjct: 393 KMATEDH-------QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVNELPDSYKRYLMNY 445
Query: 560 LKEDFDLGGIPIRI 573
++ ++ G PIRI
Sbjct: 446 YRKSLEIMGTPIRI 459
>gi|154686532|ref|YP_001421693.1| GTP-binding protein EngA [Bacillus amyloliquefaciens FZB42]
gi|375362798|ref|YP_005130837.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384265881|ref|YP_005421588.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385265259|ref|ZP_10043346.1| GTP-binding protein EngA [Bacillus sp. 5B6]
gi|387898892|ref|YP_006329188.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394993529|ref|ZP_10386274.1| GTP-binding protein Der [Bacillus sp. 916]
gi|421731218|ref|ZP_16170344.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346531|ref|YP_007445162.1| GTP-binding protein Der [Bacillus amyloliquefaciens IT-45]
gi|452856044|ref|YP_007497727.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166224304|sp|A7Z636.1|DER_BACA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|154352383|gb|ABS74462.1| EngA [Bacillus amyloliquefaciens FZB42]
gi|371568792|emb|CCF05642.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380499234|emb|CCG50272.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385149755|gb|EIF13692.1| GTP-binding protein EngA [Bacillus sp. 5B6]
gi|387173002|gb|AFJ62463.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393805641|gb|EJD67015.1| GTP-binding protein Der [Bacillus sp. 916]
gi|407075372|gb|EKE48359.1| GTP-binding protein Der [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850289|gb|AGF27281.1| GTP-binding protein Der [Bacillus amyloliquefaciens IT-45]
gi|452080304|emb|CCP22066.1| GTPase essential for ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 436
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 233/470 (49%), Gaps = 52/470 (11%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V I+GRPNVGKS +FNR+ R ++V +TP VTRD A+ + F ++D+ G+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPG--VTRDRIYSSAEWLNYDFNLIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
+ L + + + IFM++ R G+ D EV K L + KP+V
Sbjct: 62 DI--GDEPFLTQIRQQAEIAMDEADVIIFMVNGREGVTSADEEVAKILYRTK---KPVVL 116
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
A+NK ++ + + LGFG+P IS GLG+ +L
Sbjct: 117 AVNKLDNTE-----MRANIYDFYALGFGEPYPISGTHGLGLGDLL--------------- 156
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
D+C ++ + PE S +Q ++GRPNVGKS+L+NA+L E+RV+V AG T
Sbjct: 157 -DACAEHFKNI-----PETKYSDDVVQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTT 210
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RD+V F Y + +VDTAG ++ K + SV+++ K + R+ VV +VL+AEE
Sbjct: 211 RDAVDTAFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSDVVGVVLNAEEG 270
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+ +V+IVNK D + + R + Q I+ + P
Sbjct: 271 ILEQDKRIAGYAHEAGKAVVIIVNKWDAVDKDE------RTMKEFEQNIREHFQFLDYAP 324
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKIKY 527
V+F SAL + +M +I + LR+ T+ LN + + + + ++ KI Y
Sbjct: 325 VLFMSALTTKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYY 384
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQV +PP+FV F++ + + + RFL +++ F G PI+I R+
Sbjct: 385 ATQVAVKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARA 434
>gi|402844651|ref|ZP_10893003.1| ribosome-associated GTPase EngA [Klebsiella sp. OBRC7]
gi|402273608|gb|EJU22805.1| ribosome-associated GTPase EngA [Klebsiella sp. OBRC7]
Length = 492
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 234/484 (48%), Gaps = 56/484 (11%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEVEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYM- 295
+ NK + + A A+ LG G+ I+A G G+T L E L P V++
Sbjct: 114 FLVANKTDGIDADQ-----AIADFWSLGLGEIYPIAASHGRGVTSLLEHVLLPWVDEVNP 168
Query: 296 -LRVLNDSCT----QNNSSTQDVTSPEDD--ESKLPLQLAIVGRPNVGKSTLLNALLQED 348
V D+ + + + V PEDD LP +LAIVGRPNVGKSTL N +L ED
Sbjct: 169 PEEVDEDAAYWAQFEAEQNGEAVEEPEDDFNPQDLPFKLAIVGRPNVGKSTLTNRILGED 228
Query: 349 RVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAH 407
RV+V G TRDS+ + + R L+DTAG +R K SV+++ + + A+
Sbjct: 229 RVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDAN 288
Query: 408 VVALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
VV LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 VVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETL 340
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ + V F SAL G G + V + Y R+ T+ L R + H
Sbjct: 341 DFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSATRRVGTAMLTRIMTMAAEDH--- 397
Query: 518 DQSAQP--------KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGI 569
QP K+KY PP V + K L D+ R+L ++ ++ G
Sbjct: 398 ----QPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGT 453
Query: 570 PIRI 573
PIRI
Sbjct: 454 PIRI 457
>gi|145219270|ref|YP_001129979.1| GTP-binding protein EngA [Chlorobium phaeovibrioides DSM 265]
gi|189037154|sp|A4SDB8.1|DER_PROVI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145205434|gb|ABP36477.1| small GTP-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 436
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 244/475 (51%), Gaps = 68/475 (14%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTP----DDHVTRDIREGLAKLGDLRFKVLD 176
P + ++GRPNVGKS LFNR++R R A+V +TP D H++ +G A F+++D
Sbjct: 3 PLIALVGRPNVGKSTLFNRILRERAAIVDSTPGVTRDRHISEGFWQGRA------FRLMD 56
Query: 177 SAGLETE--ATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQ 234
+ G E S ++L++T MTA + +F+ D R+GL DLE+ K LR+
Sbjct: 57 TGGYAPEDGVISNAMLEQT--MTA--INDADIVVFVADARAGLSYDDLELAKVLRQRFSH 112
Query: 235 IKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDY 294
A+NK ES LA AA + G+ +P ISA+ G G+ +L +A+ + +
Sbjct: 113 KPVFFAVNKVESPQ-----LAYEAASFVSTGYTEPWCISAKDGSGVADLLDAILLEMPE- 166
Query: 295 MLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
S D E ++LA+VGRPNVGKS+ +NALL +R +V
Sbjct: 167 --------------------SDADQEEDGAIRLAVVGRPNVGKSSFVNALLGNNRQIVSD 206
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
G TRD++ F + L+DTAG +R K G S ++S K + R VV +++
Sbjct: 207 IPGTTRDAIDTRFTRNQQDFLLIDTAGLRKRTKISAGIEYYSSLRSEKAIERCEVVMVMI 266
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA ++++ A E R ++++VNK DL+ ++S K+ ++ +++ +
Sbjct: 267 DAGPGIEKQDLKIINMATERKRAVLLLVNKWDLIE--KDSKTSKQYEDT----LRSHMGN 320
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKW----CLRLPTSRLNRWLRKVMGRHSWKDQ 519
+ +PV+F SAL + +++ IDT ++ ++ TS LNR+L + + + +
Sbjct: 321 LAYVPVLFISALTKKN----LYRAIDTAREIRDNRARKISTSALNRFLEEALAANPPSSK 376
Query: 520 SA-QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ KIKY TQ++A P F F + + + +FL L+E FDL G+ I +
Sbjct: 377 GGTELKIKYMTQIQAAWPVFAFFCNNPELVQTNFRKFLENRLREKFDLKGVTISL 431
>gi|326791376|ref|YP_004309197.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427]
gi|326542140|gb|ADZ83999.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427]
Length = 441
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 231/469 (49%), Gaps = 50/469 (10%)
Query: 121 PTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGL 180
P V +IGRPNVGKS LFNRL + + ++V +TP VTRD G + + +F ++D+ G+
Sbjct: 4 PIVAVIGRPNVGKSTLFNRLTKSKTSIVDDTPG--VTRDRIYGEVEWLNHKFTIIDTGGI 61
Query: 181 ETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV- 239
E ++T IL + + IF++DV++G+ D V LRK KP+V
Sbjct: 62 EPDSTD-IILSQMRRQAEAAIESADVIIFLVDVKTGMTDADTHVANMLRKSH---KPVVL 117
Query: 240 AMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVL 299
+NK + + + T + E LG G+PI IS+ L + ++ + V Y
Sbjct: 118 VVNKVDDMVHQTMGMY----EFYNLGLGEPIPISSGQALNLGDMLD----EVVSYFPDED 169
Query: 300 NDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLT 359
++ + +++AI+G+PNVGKS+L+N ++ E+RV+V AG T
Sbjct: 170 AEAEEDDK-----------------IRVAIIGKPNVGKSSLVNKIVGEERVIVSNIAGTT 212
Query: 360 RDSVRVHFEYQGRTVYLVDTAGWLQREKEK-GPASLSVMQSRKNLMRAHVVALVLDAEE- 417
RDSV +G+ L+DTAG +R K K S++++ + RA VV +++DAEE
Sbjct: 213 RDSVDTEVTIEGQEYVLIDTAGIRRRSKIKENIEKYSIIRTIAAIDRADVVLILIDAEEG 272
Query: 418 ---------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIP 468
A E G+G +++VNK D + + A ++I + + P
Sbjct: 273 ITEQDTKIAGMAHEAGKGCIIVVNKWDAIEKDD------KTMNAYLKKITNTLAYMQYAP 326
Query: 469 VVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKY 527
+F SAL G+ + + Q R+ T LN L + M + +P KI Y
Sbjct: 327 CMFISALTGQRIPKLFDTIYAIAQNQSQRISTGVLNDVLYEAMAMNQPPSDKGKPLKIFY 386
Query: 528 FTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQV +PPTFV F++ K+ + + R++ ++E F G P+R R
Sbjct: 387 MTQVSIKPPTFVIFVNDKELMHFSYQRYIENQMREAFGFKGTPLRFIVR 435
>gi|170681267|ref|YP_001744699.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
gi|218706014|ref|YP_002413533.1| GTP-binding protein EngA [Escherichia coli UMN026]
gi|293405952|ref|ZP_06649944.1| GTP-binding protein engA [Escherichia coli FVEC1412]
gi|298381753|ref|ZP_06991352.1| GTP-binding protein engA [Escherichia coli FVEC1302]
gi|331664074|ref|ZP_08364984.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
gi|387608161|ref|YP_006097017.1| GTP-binding protein [Escherichia coli 042]
gi|417587510|ref|ZP_12238279.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
gi|419933195|ref|ZP_14450463.1| GTP-binding protein EngA [Escherichia coli 576-1]
gi|422787128|ref|ZP_16839867.1| ribosome GTPase EngA [Escherichia coli H489]
gi|422829998|ref|ZP_16878160.1| GTP-binding protein engA [Escherichia coli B093]
gi|422972908|ref|ZP_16975520.1| GTPase Der [Escherichia coli TA124]
gi|425306241|ref|ZP_18695943.1| ribosome-associated GTPase EngA [Escherichia coli N1]
gi|432354427|ref|ZP_19597698.1| GTPase Der [Escherichia coli KTE2]
gi|432402776|ref|ZP_19645528.1| GTPase Der [Escherichia coli KTE26]
gi|432427042|ref|ZP_19669541.1| GTPase Der [Escherichia coli KTE181]
gi|432461508|ref|ZP_19703655.1| GTPase Der [Escherichia coli KTE204]
gi|432476732|ref|ZP_19718729.1| GTPase Der [Escherichia coli KTE208]
gi|432490279|ref|ZP_19732148.1| GTPase Der [Escherichia coli KTE213]
gi|432518610|ref|ZP_19755796.1| GTPase Der [Escherichia coli KTE228]
gi|432538733|ref|ZP_19775633.1| GTPase Der [Escherichia coli KTE235]
gi|432603142|ref|ZP_19839386.1| GTPase Der [Escherichia coli KTE66]
gi|432632272|ref|ZP_19868197.1| GTPase Der [Escherichia coli KTE80]
gi|432641988|ref|ZP_19877820.1| GTPase Der [Escherichia coli KTE83]
gi|432666937|ref|ZP_19902516.1| GTPase Der [Escherichia coli KTE116]
gi|432681121|ref|ZP_19916494.1| GTPase Der [Escherichia coli KTE143]
gi|432719659|ref|ZP_19954627.1| GTPase Der [Escherichia coli KTE9]
gi|432771463|ref|ZP_20005788.1| GTPase Der [Escherichia coli KTE50]
gi|432775591|ref|ZP_20009860.1| GTPase Der [Escherichia coli KTE54]
gi|432793702|ref|ZP_20027786.1| GTPase Der [Escherichia coli KTE78]
gi|432799661|ref|ZP_20033682.1| GTPase Der [Escherichia coli KTE79]
gi|432840303|ref|ZP_20073768.1| GTPase Der [Escherichia coli KTE140]
gi|432852169|ref|ZP_20082211.1| GTPase Der [Escherichia coli KTE144]
gi|432863374|ref|ZP_20087421.1| GTPase Der [Escherichia coli KTE146]
gi|432887488|ref|ZP_20101541.1| GTPase Der [Escherichia coli KTE158]
gi|432913728|ref|ZP_20119361.1| GTPase Der [Escherichia coli KTE190]
gi|432962776|ref|ZP_20152308.1| GTPase Der [Escherichia coli KTE202]
gi|433019574|ref|ZP_20207774.1| GTPase Der [Escherichia coli KTE105]
gi|433054155|ref|ZP_20241329.1| GTPase Der [Escherichia coli KTE122]
gi|433063951|ref|ZP_20250870.1| GTPase Der [Escherichia coli KTE125]
gi|433068801|ref|ZP_20255587.1| GTPase Der [Escherichia coli KTE128]
gi|433159556|ref|ZP_20344391.1| GTPase Der [Escherichia coli KTE177]
gi|433179346|ref|ZP_20363741.1| GTPase Der [Escherichia coli KTE82]
gi|433204180|ref|ZP_20387947.1| GTPase Der [Escherichia coli KTE95]
gi|226741139|sp|B7N699.1|DER_ECOLU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741140|sp|B1LNG6.1|DER_ECOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|170518985|gb|ACB17163.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
gi|218433111|emb|CAR14008.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli UMN026]
gi|284922461|emb|CBG35548.1| GTP-binding protein [Escherichia coli 042]
gi|291428160|gb|EFF01187.1| GTP-binding protein engA [Escherichia coli FVEC1412]
gi|298279195|gb|EFI20709.1| GTP-binding protein engA [Escherichia coli FVEC1302]
gi|323961327|gb|EGB56939.1| ribosome GTPase EngA [Escherichia coli H489]
gi|331059873|gb|EGI31850.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
gi|345335540|gb|EGW67978.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
gi|371597541|gb|EHN86362.1| GTPase Der [Escherichia coli TA124]
gi|371607185|gb|EHN95763.1| GTP-binding protein engA [Escherichia coli B093]
gi|388414225|gb|EIL74191.1| GTP-binding protein EngA [Escherichia coli 576-1]
gi|408227873|gb|EKI51442.1| ribosome-associated GTPase EngA [Escherichia coli N1]
gi|430874834|gb|ELB98386.1| GTPase Der [Escherichia coli KTE2]
gi|430925247|gb|ELC45920.1| GTPase Der [Escherichia coli KTE26]
gi|430954741|gb|ELC73596.1| GTPase Der [Escherichia coli KTE181]
gi|430988329|gb|ELD04823.1| GTPase Der [Escherichia coli KTE204]
gi|431004550|gb|ELD19764.1| GTPase Der [Escherichia coli KTE208]
gi|431019731|gb|ELD33125.1| GTPase Der [Escherichia coli KTE213]
gi|431050404|gb|ELD60154.1| GTPase Der [Escherichia coli KTE228]
gi|431068613|gb|ELD77087.1| GTPase Der [Escherichia coli KTE235]
gi|431141716|gb|ELE43481.1| GTPase Der [Escherichia coli KTE66]
gi|431169850|gb|ELE70065.1| GTPase Der [Escherichia coli KTE80]
gi|431181251|gb|ELE81122.1| GTPase Der [Escherichia coli KTE83]
gi|431199763|gb|ELE98490.1| GTPase Der [Escherichia coli KTE116]
gi|431219851|gb|ELF17240.1| GTPase Der [Escherichia coli KTE143]
gi|431261852|gb|ELF53875.1| GTPase Der [Escherichia coli KTE9]
gi|431313929|gb|ELG01884.1| GTPase Der [Escherichia coli KTE50]
gi|431317595|gb|ELG05373.1| GTPase Der [Escherichia coli KTE54]
gi|431339365|gb|ELG26427.1| GTPase Der [Escherichia coli KTE78]
gi|431342769|gb|ELG29740.1| GTPase Der [Escherichia coli KTE79]
gi|431388337|gb|ELG72073.1| GTPase Der [Escherichia coli KTE140]
gi|431399425|gb|ELG82832.1| GTPase Der [Escherichia coli KTE144]
gi|431403972|gb|ELG87232.1| GTPase Der [Escherichia coli KTE146]
gi|431415837|gb|ELG98332.1| GTPase Der [Escherichia coli KTE158]
gi|431438993|gb|ELH20362.1| GTPase Der [Escherichia coli KTE190]
gi|431472650|gb|ELH52537.1| GTPase Der [Escherichia coli KTE202]
gi|431529882|gb|ELI06573.1| GTPase Der [Escherichia coli KTE105]
gi|431569584|gb|ELI42526.1| GTPase Der [Escherichia coli KTE122]
gi|431580737|gb|ELI53294.1| GTPase Der [Escherichia coli KTE125]
gi|431582684|gb|ELI54696.1| GTPase Der [Escherichia coli KTE128]
gi|431677048|gb|ELJ43130.1| GTPase Der [Escherichia coli KTE177]
gi|431700229|gb|ELJ65211.1| GTPase Der [Escherichia coli KTE82]
gi|431720127|gb|ELJ84161.1| GTPase Der [Escherichia coli KTE95]
Length = 490
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 232/475 (48%), Gaps = 40/475 (8%)
Query: 119 LLPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSA 178
++P V ++GRPNVGKS LFNRL R R+ALV + P +TRD + G A++ F +D+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPG--LTRDRKYGRAEIEGREFICIDTG 58
Query: 179 GLETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP- 237
G++ T + R A + + + +FM+D R+GL P D + K LR KP
Sbjct: 59 GID--GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSRE---KPT 113
Query: 238 IVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYE-ALRPSVEDYML 296
+ NK + L A + LG G+ I+A G G+ L E L P +ED
Sbjct: 114 FLVANKTDGLDPDQ-----AVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168
Query: 297 RVLNDSCTQ------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ D + + ++ + D LP++LAIVGRPNVGKSTL N +L E+RV
Sbjct: 169 QEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERV 228
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
+V G TRDS+ + E GR L+DTAG +R K SV+++ + + A+VV
Sbjct: 229 VVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVV 288
Query: 410 ALVLDAEEVRAVEE----------GRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
LV+DA E + ++ GR LV++VNK D LS + VKE V + +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLS--------QEVKEQVKETLDF 340
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK-D 518
+ + V F SAL G G + V + Y R+ TS L R + + H
Sbjct: 341 RLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLV 400
Query: 519 QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ + K+KY PP V + K L D+ R+L ++ D+ G PIRI
Sbjct: 401 RGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRI 455
>gi|134277744|ref|ZP_01764459.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
gi|226197301|ref|ZP_03792878.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
9]
gi|386861538|ref|YP_006274487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
gi|403518915|ref|YP_006653048.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
gi|418383003|ref|ZP_12966921.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
gi|418539390|ref|ZP_13104986.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
gi|418540682|ref|ZP_13106207.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
gi|418546927|ref|ZP_13112113.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
gi|418553146|ref|ZP_13117984.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
gi|134251394|gb|EBA51473.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
gi|225930680|gb|EEH26690.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
9]
gi|385346014|gb|EIF52707.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
gi|385360816|gb|EIF66723.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
gi|385362726|gb|EIF68531.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
gi|385372080|gb|EIF77212.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
gi|385376774|gb|EIF81410.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
gi|385658666|gb|AFI66089.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
gi|403074557|gb|AFR16137.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
Length = 433
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 226/460 (49%), Gaps = 49/460 (10%)
Query: 131 VGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSIL 190
+GKS LFNRL R R+ALV + P +TRD G ++G + V+D+ G E A G IL
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPG--LTRDRHYGEGRVGARPYLVVDTGGFEPVAKDG-IL 57
Query: 191 DRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPI-VAMNKCESLHN 249
A T + + +F++D R+GL P D + +LRK +PI + +NK E +
Sbjct: 58 HEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG---RPIFLVVNKAEGM-- 112
Query: 250 GTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDSCTQNNSS 309
A++ LG GDP AISA G G+ ++ +N++ +
Sbjct: 113 ---KYTAVASDFYELGLGDPRAISAAHGDGVNDM---------------INEAL--EVAY 152
Query: 310 TQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEY 369
+ E+ + +++AIVGRPNVGKSTL+N L+ EDRV+ G TRDS+ V FE
Sbjct: 153 AGEPQESEEAAAARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFER 212
Query: 370 QGRTVYLVDTAGWLQREKE-KGPASLSVMQSRKNLMRAHVVALVLDAEEVRA-------- 420
G+ L+DTAG +R K + SV+++ +++ A+VV L+LDA + +
Sbjct: 213 NGKHYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAG 272
Query: 421 --VEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGR 478
VE+GR LVV VNK D L V+E ++ + + F SA E
Sbjct: 273 FVVEQGRALVVGVNKWD--------GLDPHVRERTKADLARKLKFLEFAKFHFISAAEKT 324
Query: 479 GRIAVMHQVIDTYQKWCLRLPTSRLNRWL-RKVMGRHSWKDQSAQPKIKYFTQVKARPPT 537
G A+M V D Y +LPT +L R L V + + +PK++Y Q PP
Sbjct: 325 GIGALMRSVDDAYAAAMKKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPI 384
Query: 538 FVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
V + +++ R+L +E F L G P+RI RS
Sbjct: 385 IVIHGNALDAVTETYKRYLENRFRETFSLTGTPLRIEFRS 424
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRD-IREGLAKLGDLRFKVLDSAGLE 181
+ I+GRPNVGKS L N LI + ++ P TRD I + G + ++D+AGL
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPG--TTRDSIYVDFERNGK-HYTLIDTAGLR 226
Query: 182 TEATSGSILDRTAGM-TANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVA 240
+++ + + T ++ I ++D R + D + ++ + + +V
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRAL--VVG 284
Query: 241 MNKCESL--HNGTGSLAGAAAESLMLGFGDPIAISA--ETGLGMTELYEALRPSVED 293
+NK + L H + A A + L F ISA +TG+G AL SV+D
Sbjct: 285 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIG------ALMRSVDD 335
>gi|450068184|ref|ZP_21847030.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
gi|449207427|gb|EMC08103.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
Length = 436
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 247/471 (52%), Gaps = 54/471 (11%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LPTV I+GRPNVGKSALFNR+ R ++V + + VTRD A+ + +F ++D+ G
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDV--EGVTRDRIYTKAEWLNRQFSIIDTGG 60
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWL-RKHAPQIKPI 238
++ +++ + + +F++ + G+ D V K L R H P I
Sbjct: 61 IDD--VDAPFMEQIKHQADIAMTEADVIVFVVSAKEGITDADEYVAKILYRAHKPVI--- 115
Query: 239 VAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRV 298
+A+NK ++ + A + LG GDP +S+ G+G ++ +A +
Sbjct: 116 LAVNKVDN-----PEMRSAIYDFYALGLGDPYPVSSAHGIGTGDVLDA-----------I 159
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+++ T+ + D+ ++ +++GRPNVGKS+L+NA+L EDRV+ P AG
Sbjct: 160 VDNLPTEAQEESSDI-----------IKFSLIGRPNVGKSSLINAILGEDRVIASPVAGT 208
Query: 359 TRDSVRVHF-EYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAE 416
TRD++ F + +G+ ++DTAG + K + SVM++ + + R+ +V +VL+AE
Sbjct: 209 TRDAIDTTFTDEEGQEFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDIVLMVLNAE 268
Query: 417 E-VR---------AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
E +R A E G+G+VV+VNK D + ++++ + + + ++ Q IP
Sbjct: 269 EGIREYDKRIAGFAHEAGKGIVVVVNKWDTI--KKDNHTMAQWETDIREQFQ-YIPYA-- 323
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQPKI 525
P+VF SAL + + + Q R+P++ LN + + + + D+ + KI
Sbjct: 324 -PIVFVSALTKQRLHKLPDMIKQISQSQNTRIPSAVLNEVIMDAVAVNPTPTDKGKRLKI 382
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQV +PPTFV F++ ++ + + LRFL +++ F G PIR+ R
Sbjct: 383 FYATQVSVKPPTFVIFVNEEELMHFSYLRFLENQIRQAFVFEGTPIRLIAR 433
>gi|392940711|ref|ZP_10306355.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
gi|392292461|gb|EIW00905.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
Length = 439
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 238/470 (50%), Gaps = 57/470 (12%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFN+++ +R ++V + P VTRD G A+ D +F ++D+ GL+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKP--GVTRDRVYGNAEWLDKKFILVDTGGLDP 63
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
A + + + + +F++D + GL P D E+ LR+ ++ I+ N
Sbjct: 64 NAED-ILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEV--ILVCN 120
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLNDS 302
K +S + + LG G+PI ISA GLG+ EL + +
Sbjct: 121 KVDSFK----EMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEV--------------- 161
Query: 303 CTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDS 362
+ + E + ++ +++A++G+PNVGKS+L+N +L E+RV+V G TRD+
Sbjct: 162 -------VKKLPQEELEYTEETIKIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDA 214
Query: 363 VRVHFEYQGRTVYLVDTAGWLQREKEKGPASL---SVMQSRKNLMRAHVVALVLDAEE-- 417
+ F G+ L+DTAG R K + S+ SV+++ + R+ + L++DA E
Sbjct: 215 IDTPFSKDGKNYVLIDTAGI--RRKSRISESIERYSVLRALAAIERSDICLLMIDATEGP 272
Query: 418 --------VRAVEEGRGLVVIVNKMDLLSGRQNSA--LYKRVKEAVPQEIQTVIPQVTGI 467
A E G+G++++VNK D + N+ K V+E + ++
Sbjct: 273 TEQDTKIAGYAFENGKGIIIVVNKWDAIKKDNNTVNEYTKMVREK--------LSFISFA 324
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P++F SA G+ V+ V ++++ R+ T LN L + M +P K+
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFPPPADKGKPLKVY 384
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y +QV +PP+FV F++ + + + LRF+ +L+++F G+P+ I+ R
Sbjct: 385 YTSQVGIKPPSFVVFVNEPELMHFSYLRFIENTLRQNFGFEGVPVVISTR 434
>gi|291440533|ref|ZP_06579923.1| GTP-binding protein EngA [Streptomyces ghanaensis ATCC 14672]
gi|291343428|gb|EFE70384.1| GTP-binding protein EngA [Streptomyces ghanaensis ATCC 14672]
Length = 496
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 233/476 (48%), Gaps = 65/476 (13%)
Query: 120 LPTVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAG 179
LP + ++GRPNVGKS L NR+I RREA+V + P VTRD A+ RFKV+D+ G
Sbjct: 58 LPVLAVVGRPNVGKSTLVNRIIGRREAVVEDKPG--VTRDRVTYEAEWAGRRFKVVDTGG 115
Query: 180 LETEATSGSILDRTAGMTANVLAKTQFAI-------FMIDVRSGLHPLDLEVGKWLRKHA 232
E + G+ A+V A+ ++AI F++D + G D V + LRK
Sbjct: 116 WEQDVL---------GIDASVAAQAEYAIEAADAVVFVVDAKVGATDTDEAVVRLLRKAG 166
Query: 233 PQIKPIVAMNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE 292
KP+V C + +G A AA LG G+P +SA G G ++
Sbjct: 167 ---KPVVL---CANKVDGPSGEADAAY-LWSLGLGEPYPVSALHGRGTGDML-------- 211
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D +L VL D+ Q + P ++A++GRPNVGKS+LLN + E+RV+V
Sbjct: 212 DQVLEVLPDAPAQTFGTA----------VGGPRRVALIGRPNVGKSSLLNKVAGEERVVV 261
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-EKEKGPASLSVMQSRKNLMRAHVVAL 411
AG TRD V E G+T VDTAG +R ++G + +++ + +A V +
Sbjct: 262 NELAGTTRDPVDEMIELGGKTWKFVDTAGIRKRVHLQQGADYYASLRTAAAVEKAEVAVV 321
Query: 412 VLDAEE----------VRAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA E AVE GR LV+ NK D L + L + EI+T +
Sbjct: 322 LIDAAESISVQDQRIVTMAVEAGRALVLAFNKWDTLDEERRYYLER--------EIETEL 373
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
QV P V SA GR ++ + W R+PT RLN +L +++ H +
Sbjct: 374 GQVVWAPRVNVSARTGRHMEKLVPAIETALAGWETRVPTGRLNAFLGELVAAHPHPVRGG 433
Query: 522 -QPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
QP+I + TQ +PP FV F SG + RF+ + L+E+F G PI I+ R
Sbjct: 434 KQPRILFGTQAGTKPPRFVLFASG--FIEAGYRRFIERRLREEFGFEGTPIHISVR 487
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,237,020,455
Number of Sequences: 23463169
Number of extensions: 390948257
Number of successful extensions: 1419515
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11227
Number of HSP's successfully gapped in prelim test: 5269
Number of HSP's that attempted gapping in prelim test: 1360810
Number of HSP's gapped (non-prelim): 31659
length of query: 607
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 458
effective length of database: 8,863,183,186
effective search space: 4059337899188
effective search space used: 4059337899188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)