BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007334
(607 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7HYV8|DER_PARL1 GTPase Der OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023
/ NCIMB 13966) GN=der PE=3 SV=1
Length = 473
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/472 (40%), Positives = 282/472 (59%), Gaps = 34/472 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD REG A+LGDL F ++D+AGLE
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRREGEARLGDLSFTIIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMN 242
EA +G++ R T +A + +ID R+G+ PLD + LRK + I+A N
Sbjct: 62 EAATGTLEARMRIGTERAIADADLCLLLIDARAGVTPLDKSFSQILRKSPTPV--ILAAN 119
Query: 243 KCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE----DYMLRV 298
KCE G + E+ LG G P+ +SAE G G+ +LY+AL + D +
Sbjct: 120 KCEGGAGKAGRM-----EAYELGLGAPLPLSAEHGEGLGDLYDALAQFAKGLEADDAGQA 174
Query: 299 LNDSCT--QNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 356
+ D+ Q+ + D +P + + + PL++AI+GRPNVGKSTL+N LL EDR+L GPEA
Sbjct: 175 VEDALAEEQDADAGFDPDAPYEPDLEAPLRVAIIGRPNVGKSTLVNQLLGEDRMLTGPEA 234
Query: 357 GLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA 415
G+TRDS+ + +E++GR V L DTAG +R + + LSV + + + A VV ++LDA
Sbjct: 235 GITRDSIGIEWEWRGRRVKLWDTAGMRRRARVTEKLEKLSVADTLRAVRFAEVVVILLDA 294
Query: 416 EE---------VRAVE-EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVT 465
+ VE EGRGL+++VNK D+++ Q V + +E++ ++PQ+
Sbjct: 295 TQPFERQDLHIADLVEQEGRGLLIVVNKWDMVAEPQE------VLRVLKEELERLLPQIR 348
Query: 466 GIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-K 524
G+P+V SAL GRG +M + + W R+PT+RLNRW+++ + RH +P
Sbjct: 349 GVPIVTLSALTGRGTDKLMPAIERVHTFWNARVPTARLNRWMQEAVSRHQPPAAHGRPVN 408
Query: 525 IKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+KY +QVK+RPPTF F S + + R+L L+E FDL G+PIR+ R
Sbjct: 409 LKYISQVKSRPPTFAVFSSRADDVPTSYRRYLVNGLRETFDLPGVPIRLFMR 460
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ ++AIVGRPNVGKSTL N L+ + LV G+TRD + ++DTAG
Sbjct: 1 MSFKVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRREGEARLGDLSFTIIDTAG 59
>sp|Q2W7M7|DER_MAGSA GTPase Der OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=der PE=3 SV=1
Length = 464
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 197/475 (41%), Positives = 275/475 (57%), Gaps = 43/475 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ +R A+V++ P VTRD REG A L + F+V+D+AG E
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKRLAIVHDLPG--VTRDRREGRASLLGMEFQVVDTAGFE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ SI R T +A+ A+ +ID R+G+ PLD LR+ + I+
Sbjct: 62 DDGGD-SIEARMRHQTDMAVAEADVALLLIDSRAGVTPLDRHFADHLRRLPTPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLR---V 298
NKCE G ES LG G+P+A+SAE G GM EL+EALR D+ ++ +
Sbjct: 119 NKCEGKAGAPGLY-----ESYGLGMGEPVAVSAEHGEGMYELFEALR----DHAIKAGAL 169
Query: 299 LNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGL 358
+ + E D ++ PL +AIVGRPNVGKSTL N LL +DR+L GPEAGL
Sbjct: 170 TPEGDDPEPEEPAEGEDGEPDPTR-PLTMAIVGRPNVGKSTLGNQLLGQDRLLTGPEAGL 228
Query: 359 TRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDAEE 417
TRD++ V +E++GR + LVDTAG ++ + LSV + + + + VV LV+DA
Sbjct: 229 TRDAIAVEWEHRGRRMKLVDTAGLRKKAQIYDAIEKLSVGNTIETIRMSEVVVLVMDAAA 288
Query: 418 V----------RAVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGI 467
+ VEEGR LV+ +NK D++ Q + KR+K+ ++T +PQ G+
Sbjct: 289 ILDKQDLTIARLVVEEGRALVLAINKWDVVDDPQTA--LKRLKD----RLETSLPQARGV 342
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP---- 523
V SAL GRG +M V+DT+ KW R+PT++LNRWL ++ RH A P
Sbjct: 343 ATVTLSALTGRGIEKLMDAVLDTWTKWNRRIPTAQLNRWLEDMIERHP---PPALPGGRR 399
Query: 524 -KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KI+Y TQ KARPPTFV F + + L ++ R+L L+E FDL G+P+R+ R
Sbjct: 400 YKIRYMTQAKARPPTFVLFATRPEQLPESYSRYLVNGLREAFDLPGVPVRLYVRG 454
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+P +AI+GRPNVGKSTL N L+ + +V G+TRD G +VDTAG+
Sbjct: 1 MPFTVAIIGRPNVGKSTLFNRLVGKRLAIVHDLPGVTRDRREGRASLLGMEFQVVDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHV-VALVL 413
E + G + + M+ + ++ A VAL+L
Sbjct: 61 ---EDDGGDSIEARMRHQTDMAVAEADVALLL 89
>sp|A5EI59|DER_BRASB GTPase Der OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=der PE=3 SV=1
Length = 456
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/470 (40%), Positives = 272/470 (57%), Gaps = 46/470 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKLGDL+F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLGDLQFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
GS+ R T +A F+ID R+GL P D + R+ KP++ +
Sbjct: 62 G-GPKGSLTARMQEQTETAIALADALFFVIDARAGLTPADRTFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+ALR V +
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDALRGLVPE------- 165
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T++ + T +++ + P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 166 ---TEDEVDEHEET--DEERAARPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V EY+GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 221 DSIAVEIEYKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ + Q SAL ++ +PQV+G+
Sbjct: 281 EEQDLRIADLIEREGRALVIAVNKWDLMESKPGQISALR--------HDVDHWLPQVSGV 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M ++++Y W R+PT+ LNRW + + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVESYAVWNRRVPTAALNRWFEEAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLINSMRETFELPGTPVRITLR 442
>sp|Q1QMP4|DER_NITHX GTPase Der OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=der PE=3 SV=1
Length = 460
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/468 (41%), Positives = 269/468 (57%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F V+D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDKP--GVTRDRREGQARLGDLDFTVIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPRGSLTARMQEQTETAIAAADALMFVFDARAGLTPTDRSFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G+L ES LG GDP+ +SAE G GM++LY+ALR V+
Sbjct: 118 ANKSEGRHGEAGAL-----ESYALGLGDPVGVSAEHGEGMSDLYDALRG--------VMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + D +D S+ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPTEEAEEFDDDDIIESEDISQRPIRVAIVGRPNAGKSTLINYLLGEERLLTSPEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V +QGR + DTAG +R + E+ LSV + + A VV L++DA
Sbjct: 225 DSISVELNWQGRDFRIFDTAGLRRRSRIEEKLEKLSVADTLRAARFAEVVVLMMDAQNRF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ GRQ+S + A+ + ++PQV G+P+
Sbjct: 285 EEQDLRIADLIEREGRALVIAVNKWDLM-GRQSSLI-----AALRTDADHLLPQVKGMPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+PT+ LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGVDRLMTAIQDAYAIWNRRVPTAALNRWFEQAVDANPPPAVSGRRLKLNYV 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+F+ F S + ++ LR+L SL+ FDL G PIRIT R
Sbjct: 399 TQAKARPPSFIVFCSRADAVPESYLRYLVNSLRGFFDLPGTPIRITLR 446
>sp|A8LHW1|DER_DINSH GTPase Der OS=Dinoroseobacter shibae (strain DFL 12) GN=der PE=3
SV=1
Length = 490
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/476 (39%), Positives = 274/476 (57%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EAT S+ R +T ++ +F+ID R G+ P D LR+ + ++
Sbjct: 62 -EATDDSLQGRMRRLTERAVSMADACLFLIDARVGVTPTDEVFADILRRSNAHV--LLGA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + AG E+ LG G+P+A+SAE G GM EL AL P ++ + +
Sbjct: 119 NKAE----GRAAEAGLI-EAYALGLGEPLALSAEHGEGMAELTGALMPLIDAF--EETEN 171
Query: 302 SCTQNNSSTQDVTSPEDDESKL--------PLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+ T++ T P+ +E + PLQ+A+VGRPN GKSTL+N LL EDR+L G
Sbjct: 172 AETEDAPETDVALDPDAEEETVVRVPTKAKPLQVAVVGRPNAGKSTLINQLLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRD++ + ++ G V + DTAG ++ K ++ LSV + + A VV ++
Sbjct: 232 PEAGITRDAISLAMDWDGLPVRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVL 291
Query: 413 LDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
LDA +++R A EGR +V+ VNK D+ +Q K +KEA + ++P
Sbjct: 292 LDAGIPFEQQDLRIADLAEREGRAVVIAVNKWDMEDDKQGK--LKELKEA----FERLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q+ G P+V SA GRG + V+ ++ W R+PT+ LNRWL ++ H +
Sbjct: 346 QLRGAPLVTVSAKTGRGMDRLRDAVLRAHEVWNRRVPTAALNRWLGAMVEAHPPPAPGGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQ K RPP FV S + + ++ R+L L+EDFD+ G PIR+T RS
Sbjct: 406 RIKLRYMTQAKTRPPGFVVMCSYPEKIPESYTRYLVNGLREDFDMPGTPIRLTMRS 461
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+P LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MPFTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGAARLGDLRFTVIDTAG 59
>sp|Q1GHZ2|DER_RUEST GTPase Der OS=Ruegeria sp. (strain TM1040) GN=der PE=3 SV=1
Length = 492
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 280/512 (54%), Gaps = 52/512 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD+REG A+LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKKLALVDDQP--GVTRDLREGEARLGDLRFTVIDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+AT S+ R +T + +F+ID R+G+ P D + LRK + + I+A
Sbjct: 62 -DATDNSLEGRMRRLTERAVEMADVCLFLIDARAGVTPTDEVFAEILRKKSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAA-ESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E GS A A E+ LG G+PI +S E G G+ +LY L P E +
Sbjct: 119 NKSE------GSAADAGVLEAYGLGLGEPIRMSGEHGEGLNDLYSELLPVSEKF------ 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKL----------------PLQLAIVGRPNVGKSTLLNAL 344
+ + + DV ED+ PLQ+A+VGRPN GKSTL+N +
Sbjct: 167 EKLAEETAPETDVVLDEDENEAFNAGEEIAATPVPTLEKPLQVAVVGRPNAGKSTLINKI 226
Query: 345 LQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNL 403
L EDR+L GPEAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + +
Sbjct: 227 LGEDRLLTGPEAGITRDAISLKIDWSGTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAV 286
Query: 404 MRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAV 453
A VV ++LDA +++R A EGR +V+ VNK D+ +Q K +KEA
Sbjct: 287 KFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAVNKWDIEDEKQEK--LKALKEA- 343
Query: 454 PQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGR 513
+ ++PQ+ G P+V SA GRG + ++ + W R+PT+ LNRWL ++ +
Sbjct: 344 ---FERLLPQLRGAPLVTVSAKTGRGLDRLHAAIMKAHDVWNRRVPTAALNRWLAGMLEQ 400
Query: 514 H-SWKDQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIR 572
H Q + K++Y TQ K RPP FV S + + R+L L+EDFD+ G PIR
Sbjct: 401 HPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPASYNRYLVNGLREDFDMPGTPIR 460
Query: 573 ITQRSVPRKCGSSSSRQNTGQKVGRTFSDKRT 604
+T R K +++T ++ + +++
Sbjct: 461 LTLRGQGDKNPYKGKKKSTPSRLRKHLEGRKS 492
>sp|Q89MZ0|DER_BRAJA GTPase Der OS=Bradyrhizobium japonicum (strain USDA 110) GN=der
PE=3 SV=1
Length = 460
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 264/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDLP--GVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A+ F++D R GL P D + R+ KP++ +
Sbjct: 62 -EGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRAN---KPVLLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ E+ LG GDPI ISAE G GM ELY+AL +++
Sbjct: 118 ANKSEGKHGDAGAM-----EAFALGLGDPIQISAEHGEGMGELYDAL--------AKLMP 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ ++ S E+ ++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 165 EPVEEDEDEDDAPLSEEEAATR-PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D
Sbjct: 224 DSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ NK DL+ + A+ ++A +PQV G+P+
Sbjct: 284 EEQDLRIADLVEREGRALVLAANKWDLMETKGGGAISGLRRDA-----DHWLPQVKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + D Y W R+ TS LNRW + + + S + K+ Y
Sbjct: 339 VAVSGLMGEGIDRLMQAIQDAYAVWNRRVSTSALNRWFEQAVQANPPPAVSGRRLKLNYI 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+LT S++E FDL G P+RIT R
Sbjct: 399 TQTKARPPSFVLFCSRADAVPQSYLRYLTNSMREAFDLPGTPVRITLR 446
>sp|A4YUE1|DER_BRASO GTPase Der OS=Bradyrhizobium sp. (strain ORS278) GN=der PE=3 SV=1
Length = 456
Score = 291 bits (746), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 192/484 (39%), Positives = 262/484 (54%), Gaps = 46/484 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG AKL DL F ++D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDMPG--VTRDRREGEAKLHDLHFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A F+ID R GL P D + R+ KP++ +
Sbjct: 62 -EGPKGSLTARMQEQTETAIALADALFFVIDARVGLTPADRAFADFARRAD---KPVLLL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G++ ES LG GDPI ISAE G GM ELY+AL V
Sbjct: 118 ANKSEGKHGELGAM-----ESYALGLGDPIQISAEHGEGMGELYDALSKIVPPSDDEDDE 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
T +++ P+++AIVGRPN GKSTL+N LL E+R+L PEAG TR
Sbjct: 173 REETDEERASR------------PIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTR 220
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L+LDA
Sbjct: 221 DSIAVEVEWKGRGFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMLDAQNRF 280
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGR--QNSALYKRVKEAVPQEIQTVIPQVTGI 467
+++R + EGR LV+ VNK DL+ + Q SAL + + +PQ+TG
Sbjct: 281 EEQDLRIADLVEREGRALVLAVNKWDLMEAQPGQISALRR--------DADHWLPQITGA 332
Query: 468 PVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIK 526
P+V S L G G +M +++ Y W R+PT+ LNRW + + S + K+
Sbjct: 333 PIVAVSGLMGEGIDRLMQAIVEAYAVWNRRVPTAALNRWFEGAIANNPPPAVSGRRLKLN 392
Query: 527 YFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPRKCGSSS 586
Y TQ KARPP+FV F S + + LR+L S++E F+L G P+RIT R
Sbjct: 393 YITQTKARPPSFVLFCSRADAIPQSYLRYLVNSMRETFELPGTPVRITLREKANPFAHKR 452
Query: 587 SRQN 590
R N
Sbjct: 453 KRPN 456
>sp|B3Q9V3|DER_RHOPT GTPase Der OS=Rhodopseudomonas palustris (strain TIE-1) GN=der PE=3
SV=1
Length = 459
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 265/468 (56%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TLAIIGRPNVGKSTLFNRLVGQKLALVDDAP--GVTRDRREGEGRLGDLNFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTETAIELADALLFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ ES LG GDP+ ISAE G GM ELY+ALRP +L
Sbjct: 118 ANKSEGKSGEIGAM-----ESYALGLGDPVQISAEHGEGMGELYDALRP-----LLPEPV 167
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + + Q E+ + P+++AIVGRPN GKST +N LL E+R+L PEAG TR
Sbjct: 168 EDEEDDEPADQS----EEAIATRPIRVAIVGRPNAGKSTFINRLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 224 DSIAVEVEWKGRDFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 284 EEQDLRIADLVEREGRALVIAVNKWDLIE-RQGGQIAQLRTDA-----DHWLPQIKGVPI 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M + D Y W R+PT+ LNRW + + ++ S + K+ Y
Sbjct: 338 VATSGMLGEGVDRLMQAIQDAYAVWNRRVPTAALNRWFEQAISQNPPPAVSGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ FDL G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGAFDLPGTPVRITLR 445
>sp|Q6N586|DER_RHOPA GTPase Der OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=der PE=3 SV=1
Length = 459
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 265/468 (56%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TLAIIGRPNVGKSTLFNRLVGQKLALVDDAP--GVTRDRREGEGRLGDLNFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPKGSLTARMQEQTETAIELADALLFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ ES LG GDP+ ISAE G GM ELY+ALRP +L
Sbjct: 118 ANKSEGKSGEIGAM-----ESYALGLGDPVQISAEHGEGMGELYDALRP-----LLPEPV 167
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + + Q E+ + P+++AIVGRPN GKST +N LL E+R+L PEAG TR
Sbjct: 168 EDEEDDEPADQS----EEAIATRPIRVAIVGRPNAGKSTFINRLLGEERLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V E++GR + DTAG +R + E+ LSV + + + A VV L++DA
Sbjct: 224 DSIAVEVEWKGRDFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 284 EEQDLRIADLVEREGRALVIAVNKWDLIE-RQGGQIAQLRTDA-----DHWLPQIKGVPI 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M + D Y W R+PT+ LNRW + + ++ S + K+ Y
Sbjct: 338 VATSGMLGEGVDRLMQAIQDAYAVWNRRVPTAALNRWFEQAISQNPPPAVSGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ FDL G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGAFDLPGTPVRITLR 445
>sp|Q135K8|DER_RHOPS GTPase Der OS=Rhodopseudomonas palustris (strain BisB5) GN=der PE=3
SV=1
Length = 460
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/468 (39%), Positives = 266/468 (56%), Gaps = 38/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGEGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGAKGSLTARMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G++ ES LG GDP+ ISAE G G++ELY+ALR + +
Sbjct: 118 ANKSEGKAGEIGAM-----ESYALGLGDPVQISAEHGEGLSELYDALRALMPE------P 166
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
D +++ +T E+D SK P+++AIVGRPN GKST +N LL EDR+L PEAG TR
Sbjct: 167 DVELEDDEEIDGLT--EEDFSKRPIRVAIVGRPNAGKSTFINRLLGEDRLLTSPEAGTTR 224
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 225 DSIAVEVNWKGRDFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDSQNRF 284
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ RQ + + +A +PQ+ G+P+
Sbjct: 285 EEQDLRIADLIEREGRALVIAVNKWDLVE-RQGGQIAQLRTDA-----DHWLPQIKGVPI 338
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G +M + D Y W R+PT+ LNRW + + ++ + + K+ Y
Sbjct: 339 VATSGMLGEGVDRMMEAIQDAYAVWNTRVPTAALNRWFEQAVAQNPPPAVAGRRLKLNYV 398
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + + LR+L SL+ F+L G P+RI R
Sbjct: 399 TQTKARPPSFVVFCSRADAVPQSYLRYLVNSLRGVFELPGTPVRIMLR 446
>sp|Q07LA7|DER_RHOP5 GTPase Der OS=Rhodopseudomonas palustris (strain BisA53) GN=der
PE=3 SV=1
Length = 460
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 261/467 (55%), Gaps = 36/467 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTPG--VTRDRREGEGRLGDLEFTLIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ +R T + +F+ D R+GL P D + R+ + I+
Sbjct: 62 -EGAKGSLTERMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRANKPV--ILVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ ES LG GDP+ ISAE G G++ELY+A R ++ +
Sbjct: 119 NKSEGKAGEIGAM-----ESYALGLGDPVQISAEHGEGLSELYDAFRA--------LMPE 165
Query: 302 SCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRD 361
+ E++ SK P+++AIVGRPN GKST++N LL E+R+L PEAG TRD
Sbjct: 166 PDEEAEEDDDVEGLTEEEFSKRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTRD 225
Query: 362 SVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA----- 415
S+ V +Y+GR + DTAG +R + E+ LSV + + + A VV L+LDA
Sbjct: 226 SIAVSVDYKGRQFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMLDAQTKFE 285
Query: 416 -EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPVV 470
+++R + EGR LV+ VNK DL+ R + A+ E +PQV G+P+V
Sbjct: 286 EQDLRIADLIEREGRALVIAVNKWDLVE-RHPGQI-----GALRTEADHWLPQVKGVPIV 339
Query: 471 FTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYFT 529
S L G G +M + D+Y W R+PT+ LNRW + + + S + K+ Y T
Sbjct: 340 AVSGLMGEGIDRLMSAIEDSYATWNRRVPTAALNRWFEQAIQTNPPPAVSGRRLKLNYVT 399
Query: 530 QVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q KARPP+F+ F S + ++ LR+L SL+ F+L G P+RI R
Sbjct: 400 QAKARPPSFIVFCSRADAVPESYLRYLVNSLRNYFELPGTPVRIMLR 446
>sp|A7IIE4|DER_XANP2 GTPase Der OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 /
Py2) GN=der PE=3 SV=1
Length = 458
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 269/476 (56%), Gaps = 50/476 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
++ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F+++D+AGLE
Sbjct: 4 SLAIVGRPNVGKSTLFNRLVGKKLALVDDRP--GVTRDRREGDARLGDLSFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + +FMID R GL P D +RK KP++ +
Sbjct: 62 -EADAASLEGRMRAQTEAAIGHADAILFMIDARIGLTPTDRAFADLVRKCG---KPVILL 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL--------RPSVE 292
NK E G+L E+ LG G P+ SAE G G+++LY+A+ RP E
Sbjct: 118 ANKSEGRGGEAGTL-----EAFALGLGTPLPFSAEHGEGLSDLYDAICDALPEQTRPEPE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
+ ++ T V DD+ + P+++ ++GRPN GKSTL+N LL EDR+L
Sbjct: 173 E-----------DEDADTDFVEEEADDKPRRPIKVTVLGRPNAGKSTLINRLLGEDRLLT 221
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V Y G + + DTAG +R + E LS + + + A VV L
Sbjct: 222 GPEAGITRDSISVEVTYAGAKLEVFDTAGLRKRARIEDKLEKLSAADALRAMKFAEVVVL 281
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
++DA +++R + EGR LV+ NK DL++ L R++E ++ ++
Sbjct: 282 LVDATHPFEEQDLRIADLVAREGRALVIGYNKSDLVA---RGGLITRLRE----DVDRLL 334
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+P+V S L G G ++ + ++ W R+ T+ LNR+L++V H S
Sbjct: 335 PQVKGVPIVPVSGLMGHGLDKLVAAISSAHKVWNKRVATNPLNRFLQQVTDNHPPPAVSG 394
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ K++Y TQ KARPP+FV F S + ++ +R+L L+E FDL G+PIR+T R
Sbjct: 395 RRIKLRYMTQPKARPPSFVLFCSRTDAVPESYIRYLVNGLRETFDLPGVPIRLTLR 450
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+ LAIVGRPNVGKSTL N L+ + LV G+TRD + +VDTAG
Sbjct: 1 MTFSLAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGDARLGDLSFRIVDTAGL 60
Query: 383 LQREKEKGPASLS---VMQSRKNLMRAHVVALVLDA 415
+E ASL Q+ + A + ++DA
Sbjct: 61 ----EEADAASLEGRMRAQTEAAIGHADAILFMIDA 92
>sp|A8HVL5|DER_AZOC5 GTPase Der OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=der PE=3 SV=1
Length = 453
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 187/468 (39%), Positives = 270/468 (57%), Gaps = 42/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD REG A+LGDL F+++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDRP--GVTRDRREGDARLGDLAFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKP-IVA 240
EA + S+ R T + +F+ID R GL P D R+ KP I+
Sbjct: 62 -EADADSLEGRMRAQTETAIGDADALLFLIDARVGLTPTDRAFASLARRSG---KPTILV 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G AGA E+ LG G P+ +SAE G G+++LY+A+ ++
Sbjct: 118 ANKSE----GRGGEAGAM-EAYELGLGAPVPLSAEHGEGLSDLYDAICEALP-------- 164
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ T ++ E + ++ P+++A++GRPN GKSTL+N LL EDR+L GPEAG+TR
Sbjct: 165 -AQTAPQEEDEETEEAEANPNR-PIKVAVIGRPNAGKSTLINRLLGEDRLLTGPEAGITR 222
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V + GR + + DTAG +R + E LS + + + A VV +++DA
Sbjct: 223 DSISVEVTWNGRALEVFDTAGLRKRARIEDKLEKLSAADALRAMKFAEVVVVLMDATKPF 282
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R V EGR LV+ NK DL+ A + R++E E +PQV G+P+
Sbjct: 283 EEQDLRIADLVVREGRALVLGYNKSDLV----GPAAFSRLRE----EADHWLPQVKGVPI 334
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L GRG ++ + TY W R+PT+ LNR+L++ H S + KI+Y
Sbjct: 335 VPLSGLTGRGLDKLVEAIAATYAVWNTRIPTNPLNRYLQEATDSHPPPAVSGRRVKIRYM 394
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + L ++ LR++T L+E F L G+PIR+T R
Sbjct: 395 TQPKARPPSFVLFCSRPEALPESYLRYITNGLREAFSLPGVPIRLTLR 442
>sp|A1B4S0|DER_PARDP GTPase Der OS=Paracoccus denitrificans (strain Pd 1222) GN=der PE=3
SV=1
Length = 489
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/472 (39%), Positives = 266/472 (56%), Gaps = 34/472 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG +LGDLRF V+DSAGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAGRLGDLRFIVVDSAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R +T + + +F+ID R G+ D LR+ A + I+A
Sbjct: 62 I-AEDDSLQGRMRRLTERAVDEADVCLFVIDARVGVTAADEYFADILRRRARHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G AGA E+ LG G+P+ ISAE G GM +LY AL P E + + +
Sbjct: 119 NKAE----GRAGEAGAM-EAYALGLGEPLRISAEHGEGMDDLYRALVPLAEAFEAQNVQ- 172
Query: 302 SCTQNNSSTQDVTSPEDD----ESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + + +D +D ESK PLQ+A++GRPN GKSTL+N +L EDR+L GPEAG
Sbjct: 173 QAPETDVAVEDGDDETEDWRPSESK-PLQIAVIGRPNAGKSTLINKILGEDRLLTGPEAG 231
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPAS-LSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ V + G V + DTAG ++ + LSV + + A VV ++LD
Sbjct: 232 ITRDSISVSTNFMGTPVRIFDTAGMRKKARVTDKVEKLSVADGLRAVRFAEVVVVLLDVG 291
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
+++R A EGR +VV NK DL + K ++EA + ++PQ+ G
Sbjct: 292 IPFEQQDLRIADFAETEGRAVVVAANKWDLEEDKPEK--LKELREA----FERLLPQLKG 345
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
P+V SA G+G + + ++ ++ W R+PT+RLN+WL + H + ++
Sbjct: 346 APLVTVSARTGKGLDRLHNAILKAHEVWNRRIPTARLNQWLSTMTEAHPPPAPGGRRIRL 405
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+Y TQVK RPP FV + L D+ R+L L++DFD+ G PIR+T R
Sbjct: 406 RYITQVKTRPPAFVVMATHTDKLPDSYQRYLVNGLRQDFDMPGTPIRLTFRD 457
>sp|Q2IXA7|DER_RHOP2 GTPase Der OS=Rhodopseudomonas palustris (strain HaA2) GN=der PE=3
SV=1
Length = 459
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 182/468 (38%), Positives = 259/468 (55%), Gaps = 39/468 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD REG +LGDL F ++D+AGL+
Sbjct: 4 TFAIIGRPNVGKSTLFNRLVGQKLALVDDTP--GVTRDRREGEGRLGDLEFTIIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T + +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGAKGSLTARMQQQTETAIELADALMFVFDARAGLTPNDRAFADFARRAN---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E G G++ ES LG GDP+ ISAE G G++ELY+ALR +
Sbjct: 118 ANKSEGKAGGIGAM-----ESYALGLGDPVQISAEHGEGLSELYDALR---------AIM 163
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
+ + E+D SK P+++AIVGRPN GKST +N LL EDR+L PEAG TR
Sbjct: 164 PEPEVEDDDEEIDGLTEEDFSKRPIRVAIVGRPNAGKSTFINRLLGEDRLLTSPEAGTTR 223
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E+ LSV + + + A VV L++D+
Sbjct: 224 DSIAVEVNWKGREFRIFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDSQNRF 283
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ + R + +PQV G+P+
Sbjct: 284 EEQDLRIADLIEREGRALVIAVNKWDLVEQQGGQIAQLRA------DADHWLPQVRGVPI 337
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V TS + G G ++ + D Y W R+ T+ LNRW + + ++ + + K+ Y
Sbjct: 338 VATSGMLGEGVDRLIDAIQDAYAVWNTRVSTAALNRWFEQAVAQNPPPAVAGRRLKLNYV 397
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+ F L G P+RIT R
Sbjct: 398 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRGVFKLPGTPVRITLR 445
>sp|Q3SR12|DER_NITWN GTPase Der OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
GN=der PE=3 SV=1
Length = 455
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/468 (39%), Positives = 258/468 (55%), Gaps = 43/468 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ IIGRPNVGKS LFNRL+ ++ ALV + P VTRD REG A+LGDL F V+D+AGL+
Sbjct: 4 TIAIIGRPNVGKSTLFNRLVGQKLALVDDEP--GVTRDRREGQARLGDLDFTVIDTAGLD 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E GS+ R T +A +F+ D R+GL P D + R+ KP+V +
Sbjct: 62 -EGPRGSLTARMQEQTEAAIAAADALMFVFDARAGLTPTDRSFADFARRAD---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E H G+L ES LG GDP+ +SAE GM++LY+ALR
Sbjct: 118 ANKSEGRHGDAGAL-----ESYALGLGDPVGVSAEHDEGMSDLYDALR------------ 160
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
S + D + + P+++AIVGRPN GKST++N LL E+R+L PEAG TR
Sbjct: 161 -SVMPEPAEEVDEEEIVEPDMSRPIRVAIVGRPNAGKSTVINYLLSEERLLTSPEAGTTR 219
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
DS+ V ++GR + DTAG +R + E LSV + + + A V L++DA
Sbjct: 220 DSISVELNWKGRDFRIFDTAGLRRRSRIEAKLEKLSVADTLRAVRFAEAVVLMMDAQNRF 279
Query: 416 --EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R + EGR LV+ VNK DL+ G SA ++ ++ +PQ+ G PV
Sbjct: 280 EEQDLRIADLIEREGRALVIAVNKWDLMKG--GSARIASLR----NDVDHWLPQIRGAPV 333
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V S L G G +M + Y W R+ T+ LNRW ++ + S + K+ Y
Sbjct: 334 VAISGLTGEGIDRLMIAIQTAYAVWNRRVATALLNRWFQQAVAASPPPAVSGRRLKLNYA 393
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
TQ KARPP+FV F S + ++ LR+L SL+E FDL G PIRIT R
Sbjct: 394 TQTKARPPSFVVFCSRADAVPESYLRYLVNSLRETFDLAGTPIRITLR 441
>sp|Q5LR04|DER_RUEPO GTPase Der OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 /
DSS-3) GN=der PE=3 SV=1
Length = 487
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 181/474 (38%), Positives = 271/474 (57%), Gaps = 36/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+LGDLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGQARLGDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
T AT S+ R +T + +FMID R+G+ P D LR+ + + I+A
Sbjct: 62 T-ATDDSLQGRMRRLTERAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHV--ILAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ ELY L P + D M + +
Sbjct: 119 NKAEGAAADAGVI-----EAYGLGLGEPIRLSAEHGEGLNELYAVLMP-LADEMEQQAEE 172
Query: 302 SCTQ-------NNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + ++V +P + PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 173 QAPETDVDLDPEDEDGEEVAAPHAITREKPLQVAVVGRPNAGKSTLINRILGEDRLLTGP 232
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVL 413
EAG+TRD++ + ++ + + DTAG ++ K ++ LSV + + A VV ++L
Sbjct: 233 EAGITRDAISLQIDWNDTPMRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLL 292
Query: 414 DA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQ 463
DA +++R A EGR +V+ VNK D+ +Q+ + +KE+ + ++PQ
Sbjct: 293 DAAIPFEQQDLRIADLAEREGRAVVIAVNKWDVEENKQDK--LRELKES----FERLLPQ 346
Query: 464 VTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWKDQSAQ 522
+ G P+V SA GRG + ++ ++ W R+PT+ LNRWL ++ +H Q +
Sbjct: 347 LRGAPLVTVSAKTGRGLERLHDAILRAHEVWNRRIPTAALNRWLIGMLEQHPPPAPQGKR 406
Query: 523 PKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
K++Y TQ K RPP FV S + ++ R+L L+ DFD+ G PIR+T R
Sbjct: 407 IKLRYMTQAKTRPPGFVVMCSHPDKMPESYSRYLVNGLRADFDMPGTPIRLTLR 460
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAG 381
+ L LAIVGRPNVGKSTL N L+ + LV + G+TRD ++DTAG
Sbjct: 1 MSLTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAG 59
>sp|Q92UK6|DER_RHIME GTPase Der OS=Rhizobium meliloti (strain 1021) GN=der PE=3 SV=1
Length = 476
Score = 281 bits (720), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 185/478 (38%), Positives = 275/478 (57%), Gaps = 40/478 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV IIGRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIIGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E++ S+ R T + + ++F++D ++GL P D + + LR+ KP+V +
Sbjct: 62 -ESSPDSLQGRMWAQTEAAIDEADLSLFVVDAKAGLTPADQTLAEMLRRRG---KPVVVV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSV 291
NK E+ GS G ++ LG G+P ISAE G GM +L +A+ P
Sbjct: 118 ANKSEA----RGS-EGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPA 172
Query: 292 EDYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
ED ++ + + P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 EDVAETNVDIRPVAGEGTEDEEVEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K ++ LSV + + + A V
Sbjct: 232 TGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVV 291
Query: 411 LVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ V+ EGR V+ NK DL+ Q AL ++E + + +
Sbjct: 292 IVFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVENWQ--ALLVDLRE----KTERL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 346 LPQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVS 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ R+L L+ DFDL G+PIR+ R+
Sbjct: 406 GRRLKLKYMTQVKARPPGFMISCTRPEAVPESYTRYLINGLRNDFDLPGVPIRVHFRA 463
>sp|Q11KI3|DER_MESSB GTPase Der OS=Mesorhizobium sp. (strain BNC1) GN=der PE=3 SV=1
Length = 470
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 267/472 (56%), Gaps = 36/472 (7%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V I+GRPNVGKS LFNRL+ RR ALV +TP VTRD R A+L DLRF V+D+AGLE
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGRRIALVDDTP--GVTRDRRVHSARLLDLRFDVIDTAGLE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
EA + ++ R T + + +FMID R+GL P D + +R+ KP+V +
Sbjct: 62 EAAAPTLAGRMRAQTETAIDEADLVLFMIDARAGLMPDDRAFAEVVRRKG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK + G L E+ LG GDP+A+SAE G GM EL +A+
Sbjct: 119 NKTDVRGTDAGVL-----EAFALGLGDPVAVSAEHGQGMVELRDAI-AEFAGQAEEEERV 172
Query: 302 SCTQNNSSTQDVTSPEDDESKL----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAG 357
+ + +D+ P+ +E++ P+++A+VGRPNVGKSTL+NAL+ E+R+L GPEAG
Sbjct: 173 TEEETVLIGEDI-DPDSEEARYDPTKPIRIAVVGRPNVGKSTLINALIGEERLLTGPEAG 231
Query: 358 LTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA- 415
+TRDS+ V + ++GR + L DTAG ++ + ++ LSV +S + + A VV +V DA
Sbjct: 232 ITRDSISVDWHWRGREIKLFDTAGMRRKARVQEKLEKLSVGESLRAIRFAEVVIIVFDAT 291
Query: 416 -----EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTG 466
++++ V EGR V+ NK DL+ RQ R ++ ++PQ G
Sbjct: 292 MPFEKQDLQIADLIVREGRAPVIAFNKWDLIENRQEKLAELR------EKTDRLLPQARG 345
Query: 467 IPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KI 525
+ V SA GRG ++ + T+ W R+PT LNRWL +H S + K+
Sbjct: 346 LRSVPISAETGRGLDQLLEAAVSTHVVWNRRVPTGPLNRWLEAASTQHPPPAVSGRRLKV 405
Query: 526 KYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
KY TQVK RPP FV S + + + +R+L L+E FD+ G+PIRI+ R+
Sbjct: 406 KYMTQVKTRPPGFVLSCSRPEAMPQSYIRYLVNGLRESFDIFGVPIRISLRA 457
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 23/130 (17%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYL----VD 378
+P ++AIVGRPNVGKSTL N L+ LV G+TRD RVH R + L +D
Sbjct: 1 MPFKVAIVGRPNVGKSTLFNRLVGRRIALVDDTPGVTRDR-RVH---SARLLDLRFDVID 56
Query: 379 TAGWLQREKEKGPASLSVM--QSRKNLMRAHVVALVLDAE-----EVRAVEE-----GRG 426
TAG E+ P M Q+ + A +V ++DA + RA E G+
Sbjct: 57 TAGL---EEAAAPTLAGRMRAQTETAIDEADLVLFMIDARAGLMPDDRAFAEVVRRKGKP 113
Query: 427 LVVIVNKMDL 436
+V++ NK D+
Sbjct: 114 VVLVANKTDV 123
>sp|B9JZQ5|DER_AGRVS GTPase Der OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=der
PE=3 SV=1
Length = 474
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 274/473 (57%), Gaps = 39/473 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLVDLRFHIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + ++ R T + + ++F++D + GL +D + LRK KP+V +
Sbjct: 62 -EAGADTLEGRMRAQTEIAIDEADLSLFVVDAKMGLTHVDKALADMLRKRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVE-DYMLRVL 299
NK E+ GS G ++ LG G+P+ ISAE G GM +L +A+ ++ D
Sbjct: 118 ANKSEA----RGS-DGGFYDAFTLGLGEPVPISAEHGQGMIDLRDAIVEAIGVDRAFPED 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL------PLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
+D + + + EDDE L PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DDDVAETDIVLRPTVEGEDDEEDLAYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLTG 232
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVAL 411
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V +
Sbjct: 233 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADTLRAIRFAETVVI 291
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 292 VFDATIPFEKQDIQIVDLVLREGRAAVLAFNKWDLVEDPQ--AVLAELRE----KTERLL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V + G G +M +IDT W R+ T++LNRWL V +H S
Sbjct: 346 PQARGIRAVPMAGQTGYGLEKLMQSIIDTDMVWNKRISTAKLNRWLDSVQTQHPPPAVSG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRI 573
+ K+KY TQVKARPP F+ + ++ ++ +R+LT L+ DF++ G+PIRI
Sbjct: 406 RRLKLKYMTQVKARPPAFMISCTRPDSVPESYIRYLTNGLRADFNMPGVPIRI 458
>sp|Q2K5L2|DER_RHIEC GTPase Der OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=der
PE=3 SV=1
Length = 473
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 275/477 (57%), Gaps = 40/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIGKDRAYAKE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ ++N + +D P DE+K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DVAVTDVDIPPSENEADGED-EEPAYDETK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>sp|Q1MDD6|DER_RHIL3 GTPase Der OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=der PE=3 SV=1
Length = 473
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/476 (38%), Positives = 272/476 (57%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + ++F++D +SGL P+D ++ + LR+ KP+V +
Sbjct: 62 -EADAESLQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ ED
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIGEDRAYPEK 172
Query: 300 NDSCTQNNSSTQDVTSPEDDESKL-----PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
D + Q ++DE + PL++AIVGRPN GKSTL+N L EDR+L GP
Sbjct: 173 EDVAVTDVDIPQSSDEGDEDEEPIYDDTKPLRVAIVGRPNAGKSTLINRFLGEDRLLTGP 232
Query: 355 EAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK--EKGPASLSVMQSRKNLMRAHVVALV 412
EAG+TRDS+ V ++++GRT+ + DTAG ++ + EK LSV + + + A V +V
Sbjct: 233 EAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVIEK-LEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T+RLNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQAIIDTDKVWNKRISTARLNRWLETQQVQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>sp|C3MG60|DER_RHISN GTPase Der OS=Rhizobium sp. (strain NGR234) GN=der PE=3 SV=1
Length = 476
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 271/477 (56%), Gaps = 38/477 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DL+F+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLVDLKFRIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
A S+ R T + + ++F+ID ++GL P D + + LR+ + IV
Sbjct: 62 QSAPD-SLQGRMWAQTEQAIDEADLSLFVIDAKAGLTPADETLAEMLRRRGKPV--IVVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL---------RPSVE 292
NK E+ + G ++ LG G+P ISAE G GM +L +A+ P E
Sbjct: 119 NKSEARGSD-----GGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALGEERAFPPRE 173
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D ++ + + P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 174 DVAETDVDIRPAGAGGGEDEESEPAYDKTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 232
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V +E++GRT+ + DTAG ++ K ++ LSV + + + A V +
Sbjct: 233 GPEAGITRDSISVEWEWRGRTIKMFDTAGMRRKAKVQEKLEKLSVADALRAIRFAETVVI 292
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
+ DA ++++ V+ EGR V+ NK DL+ Q A+ ++E + + ++
Sbjct: 293 IFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDLVEDWQ--AVLADLRE----KTERLL 346
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +I+T + W R+ T+RLNRWL +H S
Sbjct: 347 PQARGIRAVPISGHTGYGLDRLMQAIIETDKVWNRRISTARLNRWLESQQVQHPPPAVSG 406
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVKARPP F+ + + + ++ +R+L L+ DFD+ G+PIR+ R+
Sbjct: 407 RRLKLKYMTQVKARPPGFMISCTRPEAVPESYVRYLINGLRNDFDMPGVPIRVHFRA 463
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 80 QNEALEDTHVEPEPDGVVEDHKVKPLYEKPVDFTKIDINLLPTVMIIGRPNVGKSALFNR 139
++ A D + P G ED + +P Y+K V I+GRPN GKS L NR
Sbjct: 173 EDVAETDVDIRPAGAGGGEDEESEPAYDKTKPL---------RVAIVGRPNAGKSTLINR 223
Query: 140 LIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEATSGSILDRTAGMTAN 199
+ E + P+ +TRD + K+ D+AG+ +A L++ + A+
Sbjct: 224 FL--GEDRLLTGPEAGITRDSISVEWEWRGRTIKMFDTAGMRRKAKVQEKLEKLS--VAD 279
Query: 200 VLAKTQFA---IFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKCESLHNGTGSLAG 256
L +FA + + D DL++ + + ++A NK + + + LA
Sbjct: 280 ALRAIRFAETVVIIFDATIPFEKQDLQIVDLVLREGRAA--VLAFNKWDLVEDWQAVLAD 337
Query: 257 AAAESLML-----GFGDPIAISAETGLGMTELYEAL 287
++ L G + IS TG G+ L +A+
Sbjct: 338 LREKTERLLPQARGI-RAVPISGHTGYGLDRLMQAI 372
>sp|B3PVJ6|DER_RHIE6 GTPase Der OS=Rhizobium etli (strain CIAT 652) GN=der PE=3 SV=1
Length = 473
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 277/488 (56%), Gaps = 40/488 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV--------E 292
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++ E
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGQGMIDLRDAIVAAIGKDRAYAKE 172
Query: 293 DYMLRVLNDSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D + ++ +++ + +D P D++K PL++AIVGRPN GKSTL+N L EDR+L
Sbjct: 173 DVAVTDVDIPPSESEADGED-EEPVYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLT 230
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +
Sbjct: 231 GPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVI 290
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++
Sbjct: 291 VFDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLL 344
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQ GI V S G G +M +IDT + W R+ T+RLNRWL +H S
Sbjct: 345 PQARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTARLNRWLETQQIQHPPPAVSG 404
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVPR 580
+ K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 405 RRIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRSAEN 464
Query: 581 KCGSSSSR 588
S R
Sbjct: 465 PYESKKKR 472
>sp|Q6G0H5|DER_BARQU GTPase Der OS=Bartonella quintana (strain Toulouse) GN=der PE=3
SV=1
Length = 477
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 271/478 (56%), Gaps = 38/478 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ ++GRPNVGKS LFNRL+ ++ ALV + P VTRD R A+L DL F V+D+AGLE
Sbjct: 4 TIAVVGRPNVGKSTLFNRLVGQKLALVCDKPG--VTRDRRIHAAELQDLCFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +FM D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMCSHTKAAINEADLILFMFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK ES + G E+ LG G+P ISAE GLG+++L +A+ ++ ++ +
Sbjct: 118 ANKSES-----KAAVGVEYEAWSLGLGEPCPISAEHGLGLSDLRDAIMDAIGKERVFESK 172
Query: 300 N-DSCT--QNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N + C Q+ S V E+ DESK PL++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 NAEKCVSVQSASVGDYVDDLEEKGSVCDESKQPLRIAVAGRPNTGKSTLINRMLGQDRLL 232
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 233 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 292
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ L + ++ +
Sbjct: 293 IVFDATAPFEKQDLQIADLVIREGRVPIIAFNKWDLIENNSQVTLAN-----LHEKCAHL 347
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T++LNRWL ++ H
Sbjct: 348 LPQVPGLRAVPLSGQYGQGIDNLMENVMMMHRMWNRRISTAKLNRWLETIVAHHPPPAIF 407
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP FV S KT+ + LR+L+ L+ FD+ G+PIRI+ R+
Sbjct: 408 GRRLKVKYITQVKTRPPGFVISCSRPKTMPQSYLRYLSNGLRNTFDMPGVPIRISLRA 465
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +A+VGRPNVGKSTL N L+ + LV + G+TRD R+H E Q ++DTAG
Sbjct: 1 MSLTIAVVGRPNVGKSTLFNRLVGQKLALVCDKPGVTRDR-RIHAAELQDLCFDVIDTAG 59
>sp|Q28QC6|DER_JANSC GTPase Der OS=Jannaschia sp. (strain CCS1) GN=der PE=3 SV=1
Length = 479
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 265/469 (56%), Gaps = 36/469 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIV-A 240
+A S+ R +T ++ +F++D R+G+ DL LRK +P+V A
Sbjct: 62 -DANDDSLEGRMRRLTERAVSMADATLFVMDARAGVTTNDLVFADILRKSG---RPVVLA 117
Query: 241 MNKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E +G L ++ LG G+P+A+SAE G GM +L + LRP +E
Sbjct: 118 ANKAEGNAGQSGLL-----DAYSLGLGEPLALSAEHGEGMADLVQVLRPMIEAAASAEEA 172
Query: 301 DSCTQNNSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTR 360
++ + +T + PLQ+A+VGRPN GKSTL+N ++ EDR+L GPEAG+TR
Sbjct: 173 ETDVDVEGEDRVITHSK------PLQIAVVGRPNAGKSTLINQIIGEDRLLTGPEAGITR 226
Query: 361 DSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALVLDA---- 415
D++ + FE+ + + DTAG +R K ++ LSV + + A VV ++LDA
Sbjct: 227 DAIGLTFEWDDVPMRIFDTAGMRKRAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAAIPF 286
Query: 416 --EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQVTGIPV 469
+++R A EGR +V+ VNK D+ +Q RV ++ ++PQ+ G P+
Sbjct: 287 ESQDLRIADLAEREGRAVVIAVNKWDVEPEKQQKLKDLRVG------LERLLPQLRGAPL 340
Query: 470 VFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP-KIKYF 528
V SA G+G + ++ + W R+ T+RLN+WL ++ H + K++Y
Sbjct: 341 VTVSAKTGKGLDKLHAAIMKIHATWNTRISTARLNQWLAAMIEAHPPPAPGGRRIKLRYM 400
Query: 529 TQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
TQ K RPP FV S + L +A R+L L++DFD+ G PIR+ RS
Sbjct: 401 TQAKTRPPGFVVMCSHPQNLPEAYSRYLVNGLRQDFDMPGTPIRLWMRS 449
>sp|A9IQH4|DER_BART1 GTPase Der OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=der PE=3 SV=1
Length = 474
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 271/477 (56%), Gaps = 39/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R AKL DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRIHAAKLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -EAGDHTLEGRMRSQTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK ES + G E+ LG G+P ISAE GLG+++L +A+ +V N
Sbjct: 118 ANKSES-----KAATGGEYEAWSLGLGEPCPISAEHGLGLSDLRDAIIDAVGSERAFSNN 172
Query: 301 ---DSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D Q S D+ ++ DESK P+++AI GRPN GKSTL+N++L++DR+L
Sbjct: 173 KEEDMTIQPASVGDDIEDLQEEGLIYDESK-PIRIAIAGRPNTGKSTLINSMLKQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV +
Sbjct: 232 GPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVVI 291
Query: 412 VLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V DA ++++ + EGR V+ NK DL+ Q + + + ++ +
Sbjct: 292 VFDATMPFEKQDLQIADLVIREGRVPVIAFNKWDLIENSQATLI------DLHEKCARFL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V S G+G +M ++ ++ W R+ T++LN+WL V+ H S
Sbjct: 346 PQVRGLRAVPLSGQYGQGIDKLMENIMMMHRVWNRRISTAKLNQWLEIVVAHHPPPAISG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQVK RPP F+ S K + + LR+L L+E FD+ GIP+R++ R+
Sbjct: 406 RRLKVKYITQVKTRPPGFMISCSRPKVMPQSYLRYLVNGLRETFDMSGIPVRLSLRA 462
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H + Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RIHAAKLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLS---VMQSRKNLMRAHVVALVLDAE 416
+E G +L Q++ + A ++ V DA+
Sbjct: 60 L----EEAGDHTLEGRMRSQTKAAIDEADLILFVFDAK 93
>sp|A4WUI6|DER_RHOS5 GTPase Der OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=der PE=3 SV=1
Length = 487
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 258/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LRK + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRKKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G++ E+ LG G+P+ +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGDAGAI-----EAWSLGLGEPVRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + +++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVSEEEADLEADPDAHKPTVKRPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+QG + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWQGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FDRLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILKAHDIWNRRITTARLNSWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>sp|Q0C441|DER_HYPNA GTPase Der OS=Hyphomonas neptunium (strain ATCC 15444) GN=der PE=3
SV=1
Length = 510
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 61/497 (12%)
Query: 125 IIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLETEA 184
I+GRPNVGKS LFNRL+ ++ ALV + P VTRD + +L L ++D+AG +
Sbjct: 7 IVGRPNVGKSTLFNRLVGKKIALVDDQPG--VTRDRKMADGRLASLPLSLIDTAGFDN-V 63
Query: 185 TSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAMNKC 244
S+ R T +A+ +F++D R G+ P D LRK I ++A NK
Sbjct: 64 NDDSLEARMRAQTEAAIAEADLVLFLVDARVGVTPEDETFAGLLRK--ANIPVVLAANKA 121
Query: 245 ESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV------------- 291
E G ++ LGFG+P+ +SAE G GM ELYE++R ++
Sbjct: 122 EGRAGEAGVF-----DAFRLGFGEPVGLSAEHGEGMAELYESIRNALGPEAYERALEEAE 176
Query: 292 EDYMLRVLNDSCTQ-NNSSTQDVTSPEDD-------------------ESKLPLQLAIVG 331
DY D + + +D T +DD +S P++LAIVG
Sbjct: 177 PDYERGAGEDILEKLAHIDIEDTTLSDDDLVAAIEAADIDADVAEAPVQSDRPIRLAIVG 236
Query: 332 RPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKG 390
RPN GKSTL+N LLQ DR+L GPEAG+TRDS+ V++E++GR + LVDTAG ++ K ++
Sbjct: 237 RPNAGKSTLINQLLQSDRMLTGPEAGITRDSITVNWEWEGRQIRLVDTAGLRRKNKVQER 296
Query: 391 PASLSVMQSRKNLMRAHVVALVLDAEEVR----------AVEEGRGLVVIVNKMDLLSGR 440
+S ++ ++L A +VALV+DA E A+ EGRG+V++++K D +
Sbjct: 297 LERMSTAETIRSLKYADIVALVMDAHEAMEKQDLQIADLALREGRGVVLVISKWDTVEDT 356
Query: 441 QNSALYKRVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPT 500
+A + R ++P G PVVF S L GR +M V+ Y+ W R T
Sbjct: 357 DGAARHIR------DLANRLMPNAGGAPVVFLSGLTGRNIEKLMPAVVKVYKDWTARAKT 410
Query: 501 SRLNRWLRKVMGRHSWKD-QSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKS 559
LNRWLR + H Q + K +Y Q+KARPPTFV S + + R+L
Sbjct: 411 GDLNRWLRHTVEHHPPPSVQGKRIKPRYMAQMKARPPTFVLIASRGDQMPEGYKRYLVNG 470
Query: 560 LKEDFDLGGIPIRITQR 576
++E FD+ G+PIR+ R
Sbjct: 471 IREAFDMHGVPIRLFVR 487
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGW 382
+PL+LAIVGRPNVGKSTL N L+ + LV + G+TRD + L+DTAG+
Sbjct: 1 MPLKLAIVGRPNVGKSTLFNRLVGKKIALVDDQPGVTRDRKMADGRLASLPLSLIDTAGF 60
Query: 383 LQREKEKGPASLSVMQSRKNLMRAHVVALVLDA 415
+ A + Q+ + A +V ++DA
Sbjct: 61 DNVNDDSLEARMRA-QTEAAIAEADLVLFLVDA 92
>sp|Q8YFH2|DER_BRUME GTPase Der OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=der PE=3 SV=1
Length = 483
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|C0RH89|DER_BRUMB GTPase Der OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=der PE=3 SV=1
Length = 483
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|Q57EY6|DER_BRUAB GTPase Der OS=Brucella abortus biovar 1 (strain 9-941) GN=der PE=3
SV=1
Length = 483
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKINLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|Q2YM98|DER_BRUA2 GTPase Der OS=Brucella abortus (strain 2308) GN=der PE=3 SV=1
Length = 483
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKINLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|B2S9M3|DER_BRUA1 GTPase Der OS=Brucella abortus (strain S19) GN=der PE=3 SV=1
Length = 483
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 272/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV S + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKINLFDTAGMRRKARVQEKLEKLSVADSLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|B9KRT2|DER_RHOSK GTPase Der OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085)
GN=der PE=3 SV=1
Length = 487
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 256/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRRKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G A E+ LG G+PI +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGD-----GGAIEAWSLGLGEPIRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVPEEEADLEADPEAHKPTVKHPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+ G + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWHGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILRAHDIWNRRITTARLNTWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>sp|Q3J2Y1|DER_RHOS4 GTPase Der OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
NCIB 8253 / DSM 158) GN=der PE=3 SV=1
Length = 487
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 256/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRRKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G A E+ LG G+PI +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGD-----GGAIEAWSLGLGEPIRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVPEEEADLEADPEAHKPTVKHPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+ G + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWHGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILRAHDIWNRRITTARLNTWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>sp|A3PJF0|DER_RHOS1 GTPase Der OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=der PE=3 SV=1
Length = 487
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 256/474 (54%), Gaps = 34/474 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQPG--VTRDLREGDARLIDLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E T S+ R +T + +F+ID R G+ P D LR+ + I+ +
Sbjct: 62 -EVTDDSLQGRMRRLTERAVEMADVCLFLIDGRVGVTPSDEVFADILRRKNAHV--ILGV 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G A E+ LG G+PI +SAE G GM +LY LRP E + R D
Sbjct: 119 NKAEGRAGD-----GGAIEAWSLGLGEPIRLSAEHGEGMDDLYHILRPIAEGFAERAAAD 173
Query: 302 SCTQNNSSTQDVTSPEDDES------KLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPE 355
+ + ++ E D K PLQ+A++GRPN GKSTL+N ++ EDR+L GPE
Sbjct: 174 APVVDVDVPEEEADLEADPEAHKPTVKHPLQIAVIGRPNAGKSTLINKIIGEDRLLTGPE 233
Query: 356 AGLTRDSVRVHFEYQGRTVYLVDTAGWLQR-------EKEKGPASLSVMQSRKNLMRAHV 408
AG+TRD++ V E+ G + + DTAG ++ EK L ++ + ++
Sbjct: 234 AGITRDAISVRSEWHGTPIRIFDTAGMRKKARISDKLEKLSVADGLRAVRFAEVVVVLLD 293
Query: 409 VALVLDAEEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIPQV 464
V + + +++R A EGR +VV VNK DL +Q +KE + ++PQ+
Sbjct: 294 VEIPFEQQDLRIADFAETEGRAVVVAVNKWDLEGEKQEK--LAELKEM----FERLLPQL 347
Query: 465 TGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQP- 523
G P+V SA GRG + ++ + W R+ T+RLN WL ++ H +
Sbjct: 348 RGAPLVTVSAKTGRGLDRLHAAILRAHDIWNRRITTARLNTWLGAMVEAHPPPAPGGRRI 407
Query: 524 KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K++Y TQVK RPP FV S + D+ R+L L++ FD+ G PIR+T R
Sbjct: 408 KLRYMTQVKTRPPGFVVMCSHPDEMPDSYRRYLVNGLRDHFDMPGTPIRLTMRG 461
>sp|Q8G2E8|DER_BRUSU GTPase Der OS=Brucella suis biovar 1 (strain 1330) GN=der PE=3 SV=1
Length = 483
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|A9M8F4|DER_BRUC2 GTPase Der OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=der PE=3 SV=1
Length = 483
Score = 272 bits (695), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 183/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|B9J7W1|DER_AGRRK GTPase Der OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
GN=der PE=3 SV=1
Length = 475
Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 271/479 (56%), Gaps = 41/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF+++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGEAKLIDLRFRIVDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F++D + GL +D + + LRK +P+V +
Sbjct: 62 -EADEETLEGRMRAQTELAIDEADLTLFVVDAKMGLTHVDKTLAEMLRKRG---RPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVL 299
NK E+ + +G ++ LG GDP ISAE G GM +L +A+ ++ D
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGDPCPISAEHGQGMMDLRDAIVEAIGHDQAFPPR 172
Query: 300 NDSCTQNNSSTQDVTS---------PEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRV 350
+D N S + P DE++ PL++AIVGRPN GKSTL+N L EDR+
Sbjct: 173 DDEAETNVSIPRSAVGEDGEEIDEEPAYDETR-PLRVAIVGRPNAGKSTLINRFLGEDRL 231
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVV 409
L GPEAG+TRDS+ V + ++GRTV + DTAG ++ + + LSV + + + A V
Sbjct: 232 LTGPEAGITRDSISVDWTWRGRTVKMFDTAGMRRKARVTEKLEKLSVADTLRAIRFAETV 291
Query: 410 ALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQT 459
++ DA ++++ V+ EGR V+ NK D++ RQ A+ ++E +
Sbjct: 292 VIIFDATIPFEKQDLQIVDLVIREGRAAVIAFNKWDMIEDRQ--AVLADLRE----KTDR 345
Query: 460 VIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQ 519
++PQ GI V + G G +M ++DT + W R+ T++LNRWL +H
Sbjct: 346 LLPQARGIRAVPIAGQTGDGLDRLMQAIVDTDKVWNKRIATAKLNRWLETQQVQHPPPAV 405
Query: 520 SAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
S + K+KY TQVKARPP F+ + +L ++ +R+L L+ DF + G+PIRI R+
Sbjct: 406 SGRRIKLKYMTQVKARPPAFMISCTRSDSLPESYVRYLINGLRADFAMPGVPIRIHFRT 464
>sp|Q169E2|DER_ROSDO GTPase Der OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=der PE=3 SV=1
Length = 492
Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 184/479 (38%), Positives = 267/479 (55%), Gaps = 43/479 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ +R ALV + P VTRD+REG A+L DLRF V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGKRLALVDDQP--GVTRDLREGAARLADLRFTVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
+ T S+ R +T + +FM+D R G+ P DL LRK A + ++A
Sbjct: 62 -DVTDDSLQGRMRRLTERAVDMADICLFMVDARVGITPTDLVFADILRKRAGHV--VLAA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLND 301
NK E G + E+ LG G+PI +SAE G G+ +LY L P + Y R D
Sbjct: 119 NKAEGAAADAGVI-----EAYSLGLGEPIRLSAEHGEGLNDLYTHLMPLADAYAERAAED 173
Query: 302 SCTQNNSSTQDVTSPEDDESKL-------PLQLAIVGRPNVGKSTLLNALLQEDRVLVGP 354
+ + + +D D E+ L PLQ+A+VGRPN GKSTL+N +L EDR+L GP
Sbjct: 174 APETDVALDEDSG---DMEAALRMPTANKPLQVAVVGRPNAGKSTLVNQILGEDRLLTGP 230
Query: 355 EAGLTRDSVRVHFEYQGRT-----VYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHV 408
EAG+TRD++ + ++ G + + DTAG ++ K ++ LSV + + A V
Sbjct: 231 EAGITRDAISLRTDWVGPEGDVIPMRIFDTAGMRKKAKVQEKLEKLSVGDGLRAVKFAEV 290
Query: 409 VALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQ 458
V ++LDA +++R A EGR +VV VNK D+ +Q A ++E+ +
Sbjct: 291 VVVLLDAAIPFEQQDLRIADLAEREGRAVVVAVNKWDIEENKQ--AKLNELRES----FE 344
Query: 459 TVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRH-SWK 517
++PQ+ G P+V SA GRG + V+ Y+ W R+ T++LNRWL ++ H
Sbjct: 345 RLLPQLRGAPLVTVSARTGRGLDRLHKAVLRAYEVWNRRVTTAQLNRWLAGMLEAHPPPA 404
Query: 518 DQSAQPKIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
Q + K++Y TQ K RPP FV S + D+ R+L L+ DFD+ G PIR+ R
Sbjct: 405 PQGKRIKLRYMTQAKTRPPGFVVMCSHPDKVPDSYNRYLVNGLRLDFDMPGTPIRLWMR 463
>sp|B0CK66|DER_BRUSI GTPase Der OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=der
PE=3 SV=1
Length = 483
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 271/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+++D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQLIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISAE G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+L L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|B5ZYX3|DER_RHILW GTPase Der OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
GN=der PE=3 SV=1
Length = 473
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 267/476 (56%), Gaps = 38/476 (7%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G A+L L F ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDARLMGLTFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA S+ R T + + ++F++D ++GL P+D + + LR+ KP+V +
Sbjct: 62 -EADEESLQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ + +G ++ LG G+P ISAE G GM +L +A+ ++
Sbjct: 118 ANKSEARGSDSGFY-----DAYTLGLGEPTPISAEHGEGMLDLRDAIVEAIGKDRAYAKE 172
Query: 301 DSCTQN-------NSSTQDVTSPEDDESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVG 353
D N + P D++K PL++AIVGRPN GKSTL+N L EDR+L G
Sbjct: 173 DVAVTNVDISEAAGEGEDEDEEPLYDDTK-PLRVAIVGRPNAGKSTLINRFLGEDRLLTG 231
Query: 354 PEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVALV 412
PEAG+TRDS+ V ++++GRT+ + DTAG ++ + + LSV + + + A V +V
Sbjct: 232 PEAGITRDSISVEWDWRGRTIKMFDTAGMRRKARVTEKLEKLSVADALRAIRFAETVVIV 291
Query: 413 LDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVIP 462
DA ++++ V+ EGR V+ NK D++ RQ A+ ++E + ++P
Sbjct: 292 FDATIPFEKQDLQIVDLVLREGRAAVLAFNKWDMIEDRQ--AVLADLRE----KTDRLLP 345
Query: 463 QVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSAQ 522
Q GI V S G G +M +IDT + W R+ T++LNRWL +H S +
Sbjct: 346 QARGIRAVPISGQTGWGLDKLMQSIIDTDRVWNKRISTAKLNRWLETQQIQHPPPAVSGR 405
Query: 523 P-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
K+KY TQVKARPP F+ + L ++ R+L L+ DFD+ +PIRI RS
Sbjct: 406 RIKLKYMTQVKARPPAFMISCTRSDALPESYTRYLINGLRADFDMPSVPIRIHFRS 461
>sp|A5VNV9|DER_BRUO2 GTPase Der OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=der PE=3 SV=1
Length = 483
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 270/486 (55%), Gaps = 49/486 (10%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TLAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T +++ +F+ID ++G+ P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEAL-------RPSVED 293
NK E+ GS AG ++ LG G+P ISA+ G GM +L +A+ R E+
Sbjct: 118 ANKAEA----RGSEAGMY-DAFQLGLGEPCPISAKHGQGMPDLRDAIVELLGEERVFAEE 172
Query: 294 YMLRVLNDSCTQNNSST---QDVTSPEDDE-----SKLPLQLAIVGRPNVGKSTLLNALL 345
++ T D+ P+ +E + PL++AIVGRPN GKSTL+N +L
Sbjct: 173 RQEEAADEVFTPAAVGALVGDDIEDPDAEEIPAYDATKPLRIAIVGRPNAGKSTLINTML 232
Query: 346 QEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLM 404
EDR+L GPEAG+TRDS+ +E+ GR + L DTAG ++ + ++ LSV + +
Sbjct: 233 GEDRLLTGPEAGITRDSISADWEWHGRKIKLFDTAGMRRKARVQEKLEKLSVADGLRAIR 292
Query: 405 RAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYKRVKEA 452
A VV +VLDA ++++ + EGR V+ NK DL+ RQ + LY++
Sbjct: 293 FAEVVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTAR- 351
Query: 453 VPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMG 512
++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL V+
Sbjct: 352 -------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRISTGRLNRWLEGVIA 404
Query: 513 RHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPI 571
S + K+KY TQVK RPP FV S + + +R+ L+E FD+ G+PI
Sbjct: 405 HQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPNAMPQSYVRYFINGLRETFDMPGVPI 464
Query: 572 RITQRS 577
R++ R+
Sbjct: 465 RLSLRT 470
>sp|Q8UD28|DER_AGRT5 GTPase Der OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=der PE=3 SV=1
Length = 476
Score = 268 bits (685), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 178/481 (37%), Positives = 271/481 (56%), Gaps = 48/481 (9%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ ++ ALV +TP VTRD R G AKL DLRF ++D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGKKLALVDDTP--GVTRDRRPGDAKLIDLRFTIIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
++ ++ R T + + +F+ID ++GL P D +G+ LR+ KP+V +
Sbjct: 62 -QSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ GS AG ++ LG G+P +SAE G GM +L +A+ ++ + M
Sbjct: 118 ANKSEA----RGSDAGFY-DAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIGEDMA---- 168
Query: 301 DSCTQNNSSTQDVTSPEDDESKL-------------PLQLAIVGRPNVGKSTLLNALLQE 347
+ + D+ P + PL++AI+GRPN GKSTL+N L E
Sbjct: 169 -FPPDVDEAETDIVLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGE 227
Query: 348 DRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRA 406
DR+L GPEAG+TRDS+ V ++++GRT+ + DTAG ++ K + LSV S +++ A
Sbjct: 228 DRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFA 287
Query: 407 HVVALVLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQE 456
V +V D+ ++++ V+ EGR V+ NK DL+ Q A ++E +
Sbjct: 288 ETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQ--AYLADLRE----K 341
Query: 457 IQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSW 516
+ ++PQ GI V S G G +M +IDT + W R+ T++LNRWL +H
Sbjct: 342 TERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPP 401
Query: 517 KDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQ 575
S + K+KY TQVKARPP F+ + + + ++ R+L L++DFD+ G+PIR+
Sbjct: 402 PAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHY 461
Query: 576 R 576
R
Sbjct: 462 R 462
>sp|Q986D9|DER_RHILO GTPase Der OS=Rhizobium loti (strain MAFF303099) GN=der PE=3 SV=1
Length = 479
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 268/481 (55%), Gaps = 45/481 (9%)
Query: 123 VMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLET 182
V IIGRPNVGKS LFNRL+ R+ ALV +TP VTRD R AKL DL F V+D+AG E
Sbjct: 5 VAIIGRPNVGKSTLFNRLVGRKLALVDDTPG--VTRDRRVHAAKLYDLHFDVIDTAGFE- 61
Query: 183 EATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM- 241
+A + ++ R T + + F ID +SGL P D + +RK KP+V +
Sbjct: 62 DAGASTLPGRMRAQTEIAIHEADLIFFTIDAKSGLLPDDRTFAEIVRKSG---KPVVLVA 118
Query: 242 NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV-EDYMLRVLN 300
NK E+ G L E+ LG G+PI +SAE G GM +L +A+ ++ E
Sbjct: 119 NKAEAKGAQGGML-----EAWELGLGEPIPVSAEHGQGMPDLRDAVIAALGEARAFGEEE 173
Query: 301 DSCTQNNSSTQ-----DVTSPEDDESKL-----PLQLAIVGRPNVGKSTLLNALLQEDRV 350
+ ++T+ D+ P+ +++ P+++A+VGRPN GKSTL+NAL+ E+R+
Sbjct: 174 EGEDDEIAATEVLIGEDIADPDAEDAHTYDNTKPMRIAVVGRPNAGKSTLINALIGEERL 233
Query: 351 LVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREKEKGPASLSVMQSRKNLMR---AH 407
L GPEAG+TRDS+ V +++ GR + L DTAG R K + L VM + L A
Sbjct: 234 LTGPEAGITRDSISVDWDWHGRRLKLFDTAG--MRRKARIHEKLEVMSVQDGLRAIRFAE 291
Query: 408 VVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEI 457
+V +VLDA ++++ + EGR V+ NK DL+ Q L ++E +
Sbjct: 292 IVIIVLDATIPFEKQDLQIADLIIREGRAPVIAFNKWDLIDHPQE--LLAELRE----KT 345
Query: 458 QTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWK 517
+ ++PQV GI V SA GRG +M V+ T++ W R+ T +LNRWL ++ H
Sbjct: 346 ERLLPQVRGIQAVPVSAETGRGLDKLMDAVLRTHKVWNSRVSTGKLNRWLEAILAHHPPP 405
Query: 518 DQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQR 576
+ + K+KY TQ K RPP FV S + + +R+L+ SL+E FD+ G+PIRI R
Sbjct: 406 AVAGRRLKVKYVTQAKTRPPGFVVQCSRPDAMPQSYVRYLSNSLREAFDMPGVPIRIALR 465
Query: 577 S 577
+
Sbjct: 466 T 466
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ ++AI+GRPNVGKSTL N L+ LV G+TRD RVH + ++DTAG
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDR-RVHAAKLYDLHFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+ P + Q+ + A ++ +DA+
Sbjct: 60 FEDAGASTLPGRMRA-QTEIAIHEADLIFFTIDAK 93
>sp|A6WW65|DER_OCHA4 GTPase Der OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=der PE=3 SV=1
Length = 483
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 272/491 (55%), Gaps = 59/491 (12%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
TV I+GRPNVGKS LFNRL+ R+ ALV + P VTRD R AKL DL+F+V+D+AGLE
Sbjct: 4 TVAIVGRPNVGKSTLFNRLVGRKLALVDDLP--GVTRDRRIHDAKLYDLKFQVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA + S+ R T + + +F++D ++GL P D + +R+ KP+V +
Sbjct: 62 -EAANDSLEARMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSG---KPVVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSVEDYMLRVLN 300
NK E+ +G ++ LG G+P ISAE G GM +L +A+ + + RV
Sbjct: 118 ANKAEARGAQSGMY-----DAFQLGLGEPCPISAEHGQGMPDLRDAIVELLGEE--RVFA 170
Query: 301 DSCTQNNSSTQDVTSPED--------------------DESKLPLQLAIVGRPNVGKSTL 340
D + + +V +P+ D +K PL++AIVGRPN GKSTL
Sbjct: 171 DE--KEEETADEVFTPKAVGELIGDDIEDPDEEEIPAYDATK-PLRIAIVGRPNAGKSTL 227
Query: 341 LNALLQEDRVLVGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQS 399
+N +L EDR+L GPEAG+TRDS+ V +E++GR + L DTAG ++ + ++ LSV
Sbjct: 228 INTMLGEDRLLTGPEAGITRDSISVDWEWRGRKIKLFDTAGLRRKSRVQEKLEKLSVADG 287
Query: 400 RKNLMRAHVVALVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQN--SALYK 447
+ + A VV +VLDA ++++ + EGR ++ NK DL+ RQ + LY+
Sbjct: 288 LRAIRFAEVVIIVLDATIPFEKQDLQIADLIIREGRAPIIAFNKWDLIEDRQMVLADLYE 347
Query: 448 RVKEAVPQEIQTVIPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWL 507
+ ++PQV G+ V S G+G +M V+ T++ W R+ T RLNRWL
Sbjct: 348 KTAR--------LLPQVRGLRAVPISGERGQGIDKLMENVVKTHEIWNRRVSTGRLNRWL 399
Query: 508 RKVMGRHSWKDQSAQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDL 566
V+ S + K+KY TQVK RPP FV S + + +R+L L+E FD+
Sbjct: 400 AGVIAHQPPPAVSGRRLKVKYMTQVKTRPPGFVVSCSRPDAMPQSYVRYLINGLRETFDM 459
Query: 567 GGIPIRITQRS 577
G+PIR++ R+
Sbjct: 460 PGVPIRLSLRT 470
>sp|Q6G5J7|DER_BARHE GTPase Der OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=der PE=3 SV=1
Length = 475
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 273/490 (55%), Gaps = 40/490 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R A L DLRF V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGQKLALVDDKPG--VTRDRRVHAATLQDLRFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
E ++ R T + + +F+ D +SG+ P DL +RK KPIV +
Sbjct: 62 -ETGDHTLEGRMRAHTKAAIDEADLILFVFDAKSGITPSDLNFASLVRKSG---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEA-LRPSVEDYMLRVL 299
NK ES + G E+ LG G+P +ISAE GLG+++L +A ++ S + +
Sbjct: 118 ANKSES-----KAAIGGEYEAWSLGLGEPCSISAEHGLGLSDLRDAIMKASGGERIFASK 172
Query: 300 NDS---CTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVL 351
N Q+ S + + E+ D+SK PL++A+ GRPN GKSTL+N +L +DR+L
Sbjct: 173 NQEEHIALQSASLDDYIDNLEEKGDVYDKSK-PLRIAVAGRPNTGKSTLINRMLGQDRLL 231
Query: 352 VGPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVA 410
GPEAGLTRDS+ V +E++GR + L DTAG ++ K ++ LSV + + + A VV
Sbjct: 232 TGPEAGLTRDSISVDWEWRGRHIKLFDTAGLRRKSKIQEKLEKLSVADTLRAIRFAEVVV 291
Query: 411 LVLDA------EEVR----AVEEGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTV 460
+V DA ++++ + EGR ++ NK DL+ Q + + + ++ +
Sbjct: 292 IVFDATTPFEKQDLQIADLVIREGRVPLIAFNKWDLIENSQATLV------DLHEKCIRL 345
Query: 461 IPQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQS 520
+PQV G+ V S G+G +M V+ ++ W R+ T +LNRWL ++ H
Sbjct: 346 LPQVRGLRAVPLSGQYGQGIDKLMENVMMMHRVWNRRISTGKLNRWLETIVAHHPPPAVL 405
Query: 521 AQP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRSVP 579
+ K+KY TQVK RPP FV S K + + LR+L+ L+ FD+ GIPIRI+ R+
Sbjct: 406 GRRLKVKYVTQVKTRPPGFVFSCSRPKLMPQSYLRYLSNELRNTFDMPGIPIRISLRASD 465
Query: 580 RKCGSSSSRQ 589
+ S ++
Sbjct: 466 NPFATRSKKK 475
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 12/95 (12%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVHFE-YQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD RVH Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGQKLALVDDKPGVTRDR-RVHAATLQDLRFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
+E G +L + MRAH A + +A+
Sbjct: 60 L----EETGDHTL------EGRMRAHTKAAIDEAD 84
>sp|A1URU0|DER_BARBK GTPase Der OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=der PE=3 SV=1
Length = 473
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 270/477 (56%), Gaps = 39/477 (8%)
Query: 122 TVMIIGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLGDLRFKVLDSAGLE 181
T+ I+GRPNVGKS LFNRL+ ++ ALV + P VTRD R A+ DL F V+D+AGLE
Sbjct: 4 TIAIVGRPNVGKSTLFNRLVGKKLALVDDKP--GVTRDRRIHAARFQDLYFDVIDTAGLE 61
Query: 182 TEATSGSILDRTAGMTANVLAKTQFAIFMIDVRSGLHPLDLEVGKWLRKHAPQIKPIVAM 241
EA ++ R T + + +F++D +SG+ DL +RK KPIV +
Sbjct: 62 -EADDHTLEGRMRSQTKVAIDEADLILFVLDAKSGITSSDLNFASLVRKSE---KPIVLV 117
Query: 242 -NKCESLHNGTGSLAGAAAESLMLGFGDPIAISAETGLGMTELYEALRPSV---EDYMLR 297
NK ES G E+ LG G+P AISAE GLG+++L +A+ +V + + +
Sbjct: 118 ANKSESKAATEGKY-----EAWSLGLGEPCAISAEHGLGLSDLRDAIVDAVGKDKAFDNK 172
Query: 298 VLNDSCTQNNSSTQDVTSPED-----DESKLPLQLAIVGRPNVGKSTLLNALLQEDRVLV 352
D+ Q+ S + E+ DES P+++AI GRPN GKSTL+N++L +DR+L
Sbjct: 173 KEEDTIIQSASVGDNGDDLEEEGCIYDESA-PIRIAIAGRPNTGKSTLINSMLGQDRLLT 231
Query: 353 GPEAGLTRDSVRVHFEYQGRTVYLVDTAGWLQREK-EKGPASLSVMQSRKNLMRAHVVAL 411
GPEAG+TRDS+ + +E++ R + L DTAG ++ K ++ LSV + + + A VV +
Sbjct: 232 GPEAGVTRDSISIDWEWRSRHIKLFDTAGLRRKSKIQEKLEKLSVTDTLRAIRFAEVVVI 291
Query: 412 VLDA------EEVRAVE----EGRGLVVIVNKMDLLSGRQNSALYKRVKEAVPQEIQTVI 461
V D+ ++++ V+ EGR ++ NK DL+ Q + + ++ ++
Sbjct: 292 VFDSTAPFEKQDLQIVDLVIREGRVPIIAFNKWDLIENCQE------ILADLHEKCACLL 345
Query: 462 PQVTGIPVVFTSALEGRGRIAVMHQVIDTYQKWCLRLPTSRLNRWLRKVMGRHSWKDQSA 521
PQV G+ V S G+G +M + ++ W R+ T +LNRWL V+ RH S
Sbjct: 346 PQVRGLRAVPLSGQYGQGIDKLMENITMIHRIWNRRISTGKLNRWLETVVTRHPPPAISG 405
Query: 522 QP-KIKYFTQVKARPPTFVAFLSGKKTLSDAELRFLTKSLKEDFDLGGIPIRITQRS 577
+ K+KY TQ+K RPP F+ S + + + LR+L+ L++ FD+ G+PIR++ R+
Sbjct: 406 RRLKVKYITQIKTRPPGFMISCSRPEVMPQSYLRYLSNGLRDAFDMPGVPIRLSLRT 462
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 323 LPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSVRVH-FEYQGRTVYLVDTAG 381
+ L +AIVGRPNVGKSTL N L+ + LV + G+TRD R+H +Q ++DTAG
Sbjct: 1 MSLTIAIVGRPNVGKSTLFNRLVGKKLALVDDKPGVTRDR-RIHAARFQDLYFDVIDTAG 59
Query: 382 WLQREKEKGPASLSVMQSRKNLMRAHVVALVLDAE 416
L+ + Q++ + A ++ VLDA+
Sbjct: 60 -LEEADDHTLEGRMRSQTKVAIDEADLILFVLDAK 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,445,838
Number of Sequences: 539616
Number of extensions: 9402683
Number of successful extensions: 45004
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 832
Number of HSP's that attempted gapping in prelim test: 36208
Number of HSP's gapped (non-prelim): 4409
length of query: 607
length of database: 191,569,459
effective HSP length: 123
effective length of query: 484
effective length of database: 125,196,691
effective search space: 60595198444
effective search space used: 60595198444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)