Query 007337
Match_columns 607
No_of_seqs 292 out of 2193
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 23:15:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007337.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007337hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hyda1 c.37.1.12 (A:324-578) 100.0 5.8E-66 4.2E-70 506.4 27.7 210 389-600 9-254 (255)
2 d2pmka1 c.37.1.12 (A:467-707) 100.0 1.3E-64 9.1E-69 493.4 26.9 204 396-601 1-241 (241)
3 d3b60a1 c.37.1.12 (A:329-581) 100.0 3.3E-64 2.4E-68 495.1 27.8 208 392-600 9-252 (253)
4 d1jj7a_ c.37.1.12 (A:) Peptide 100.0 2.4E-62 1.7E-66 481.2 25.7 205 393-597 8-250 (251)
5 d1mv5a_ c.37.1.12 (A:) Multidr 100.0 9.7E-63 7E-67 481.3 17.8 203 397-601 2-240 (242)
6 d1r0wa_ c.37.1.12 (A:) Cystic 100.0 7.5E-54 5.4E-58 427.5 16.7 196 395-597 37-256 (281)
7 d2awna2 c.37.1.12 (A:4-235) Ma 100.0 1.5E-45 1.1E-49 354.0 17.0 179 397-589 1-222 (232)
8 d1oxxk2 c.37.1.12 (K:1-242) Gl 100.0 2.6E-45 1.9E-49 353.8 18.4 182 396-589 3-232 (242)
9 d3d31a2 c.37.1.12 (A:1-229) Su 100.0 3.3E-45 2.4E-49 350.6 17.7 177 397-588 2-218 (229)
10 d1g2912 c.37.1.12 (1:1-240) Ma 100.0 4E-45 2.9E-49 352.9 18.1 180 396-589 3-231 (240)
11 d3dhwc1 c.37.1.12 (C:1-240) Me 100.0 6.7E-45 4.9E-49 351.4 17.6 181 397-588 2-231 (240)
12 d1v43a3 c.37.1.12 (A:7-245) Hy 100.0 8.1E-45 5.9E-49 350.1 18.0 180 396-589 6-228 (239)
13 d1l2ta_ c.37.1.12 (A:) MJ0796 100.0 8.9E-45 6.5E-49 348.7 16.1 176 397-582 2-229 (230)
14 d1b0ua_ c.37.1.12 (A:) ATP-bin 100.0 1.9E-42 1.4E-46 339.8 19.6 189 396-598 2-251 (258)
15 d1ji0a_ c.37.1.12 (A:) Branche 100.0 1.3E-41 9.7E-46 330.8 19.7 184 396-588 6-229 (240)
16 d1g6ha_ c.37.1.12 (A:) MJ1267 100.0 3.8E-41 2.8E-45 331.0 17.7 178 396-587 4-239 (254)
17 d2onka1 c.37.1.12 (A:1-240) Mo 100.0 2.1E-40 1.6E-44 318.4 18.7 181 397-596 3-226 (240)
18 d1vpla_ c.37.1.12 (A:) Putativ 100.0 2.9E-40 2.1E-44 320.6 19.3 180 395-588 1-223 (238)
19 d1l7vc_ c.37.1.12 (C:) ABC tra 100.0 1.1E-37 8.1E-42 302.1 15.8 174 397-588 4-222 (231)
20 d3b60a2 f.37.1.1 (A:10-328) Mu 100.0 5.4E-33 4E-37 282.0 43.5 316 57-380 3-318 (319)
21 d2hyda2 f.37.1.1 (A:1-323) Put 100.0 4.8E-33 3.5E-37 283.1 39.3 322 58-380 2-323 (323)
22 d1sgwa_ c.37.1.12 (A:) Putativ 100.0 1.2E-34 9E-39 274.5 14.9 161 396-573 2-197 (200)
23 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.7 1.5E-18 1.1E-22 173.1 8.8 78 499-576 200-286 (292)
24 d1ye8a1 c.37.1.11 (A:1-178) Hy 99.3 1.5E-13 1.1E-17 126.0 0.8 80 500-581 81-162 (178)
25 g1ii8.1 c.37.1.12 (A:,B:) Rad5 99.2 1.9E-11 1.4E-15 123.5 9.8 76 499-574 277-361 (369)
26 d1e69a_ c.37.1.12 (A:) Smc hea 98.8 1.3E-08 9.7E-13 100.8 13.8 75 500-574 219-299 (308)
27 d1w1wa_ c.37.1.12 (A:) Smc hea 98.8 6.3E-09 4.6E-13 107.9 9.8 72 500-571 332-408 (427)
28 g1xew.1 c.37.1.12 (X:,Y:) Smc 98.4 1.7E-06 1.2E-10 86.0 16.6 73 499-571 223-299 (329)
29 d3b60a2 f.37.1.1 (A:10-328) Mu 97.9 0.011 7.9E-07 56.2 33.6 239 62-314 4-248 (319)
30 d2hyda2 f.37.1.1 (A:1-323) Put 97.3 0.022 1.6E-06 54.2 23.6 33 130-162 69-101 (323)
31 d1tf7a2 c.37.1.11 (A:256-497) 95.6 0.024 1.7E-06 52.1 10.0 63 511-573 108-187 (242)
32 d1cr2a_ c.37.1.11 (A:) Gene 4 95.4 0.035 2.6E-06 52.1 10.7 25 414-438 24-48 (277)
33 d1nlfa_ c.37.1.11 (A:) Hexamer 94.9 0.011 8.2E-07 55.6 5.4 59 515-573 129-213 (274)
34 d1ewqa2 c.37.1.12 (A:542-765) 94.8 0.024 1.7E-06 51.9 6.9 47 517-563 113-161 (224)
35 d1wb9a2 c.37.1.12 (A:567-800) 93.6 0.12 8.4E-06 47.4 9.2 45 517-561 119-166 (234)
36 d1tf7a1 c.37.1.11 (A:14-255) C 92.9 0.39 2.9E-05 42.8 11.9 55 518-572 125-195 (242)
37 d1znwa1 c.37.1.1 (A:20-201) Gu 89.8 0.057 4.1E-06 47.2 2.1 14 425-438 2-15 (182)
38 d1j8yf2 c.37.1.10 (F:87-297) G 89.8 0.25 1.8E-05 44.1 6.5 15 424-438 11-25 (211)
39 d1ly1a_ c.37.1.1 (A:) Polynucl 89.7 0.055 4E-06 45.4 1.8 13 426-438 3-15 (152)
40 d2i3ba1 c.37.1.11 (A:1-189) Ca 89.5 0.018 1.3E-06 50.1 -1.7 67 488-557 104-170 (189)
41 d1r7ra3 c.37.1.20 (A:471-735) 89.1 0.25 1.8E-05 45.9 6.2 67 505-571 87-175 (265)
42 d1lv7a_ c.37.1.20 (A:) AAA dom 88.8 0.74 5.4E-05 42.3 9.3 17 422-438 42-58 (256)
43 d1okkd2 c.37.1.10 (D:97-303) G 88.6 0.67 4.9E-05 41.1 8.5 15 424-438 5-19 (207)
44 d1sq5a_ c.37.1.6 (A:) Pantothe 88.4 0.14 1E-05 48.8 3.8 50 427-476 82-154 (308)
45 d1d2na_ c.37.1.20 (A:) Hexamer 88.1 0.8 5.9E-05 41.7 9.0 61 511-571 93-171 (246)
46 d1yj5a2 c.37.1.1 (A:351-522) 5 88.0 0.81 5.9E-05 39.1 8.5 83 422-524 11-99 (172)
47 d1l8qa2 c.37.1.20 (A:77-289) C 87.6 0.41 3E-05 42.7 6.4 70 515-584 94-168 (213)
48 d1s96a_ c.37.1.1 (A:) Guanylat 87.5 0.1 7.5E-06 46.7 2.2 15 424-438 1-15 (205)
49 d1sxje2 c.37.1.20 (E:4-255) Re 87.0 0.61 4.4E-05 42.2 7.5 43 518-561 131-173 (252)
50 d1g5ta_ c.37.1.11 (A:) ATP:cor 86.9 0.23 1.7E-05 42.0 4.0 65 509-573 83-153 (157)
51 d1ls1a2 c.37.1.10 (A:89-295) G 85.4 2.3 0.00017 37.4 10.2 14 425-438 10-23 (207)
52 d1a7ja_ c.37.1.6 (A:) Phosphor 85.3 0.14 1.1E-05 48.0 2.0 22 427-448 6-44 (288)
53 d1ixza_ c.37.1.20 (A:) AAA dom 84.3 0.71 5.2E-05 42.1 6.4 13 426-438 43-55 (247)
54 d1zp6a1 c.37.1.25 (A:6-181) Hy 82.9 0.18 1.3E-05 42.9 1.4 15 424-438 3-17 (176)
55 d1pzna2 c.37.1.11 (A:96-349) D 82.8 0.14 1E-05 46.8 0.6 17 422-438 33-49 (254)
56 d1y63a_ c.37.1.1 (A:) Probable 82.3 0.25 1.9E-05 41.9 2.2 16 423-438 3-18 (174)
57 d1m8pa3 c.37.1.15 (A:391-573) 82.1 0.21 1.5E-05 42.6 1.5 16 423-438 4-19 (183)
58 g1ii8.1 c.37.1.12 (A:,B:) Rad5 81.7 0.27 1.9E-05 46.7 2.2 23 415-438 14-36 (369)
59 d1n0wa_ c.37.1.11 (A:) DNA rep 81.5 0.3 2.2E-05 42.8 2.5 17 422-438 20-36 (242)
60 d1ak2a1 c.37.1.1 (A:14-146,A:1 81.1 0.3 2.2E-05 42.5 2.2 16 423-438 1-16 (190)
61 d1uj2a_ c.37.1.6 (A:) Uridine- 80.5 0.37 2.7E-05 42.7 2.7 24 427-450 4-49 (213)
62 d2gj8a1 c.37.1.8 (A:216-376) P 79.1 1.4 0.0001 36.5 5.9 65 502-566 64-129 (161)
63 d1kgda_ c.37.1.1 (A:) Guanylat 78.5 0.39 2.9E-05 41.5 2.1 13 426-438 4-16 (178)
64 d1gkya_ c.37.1.1 (A:) Guanylat 77.9 0.35 2.5E-05 42.1 1.5 11 428-438 4-14 (186)
65 d1vmaa2 c.37.1.10 (A:82-294) G 77.8 0.46 3.3E-05 42.4 2.3 16 423-438 9-24 (213)
66 d1np6a_ c.37.1.10 (A:) Molybdo 77.5 0.59 4.3E-05 39.2 2.9 12 427-438 4-15 (170)
67 d2qy9a2 c.37.1.10 (A:285-495) 75.9 0.57 4.2E-05 41.7 2.4 14 425-438 9-22 (211)
68 d1p9ra_ c.37.1.11 (A:) Extrace 75.9 0.68 4.9E-05 45.6 3.2 48 508-561 217-264 (401)
69 d1knqa_ c.37.1.17 (A:) Glucona 75.6 0.43 3.1E-05 40.2 1.5 16 423-438 4-19 (171)
70 d1lvga_ c.37.1.1 (A:) Guanylat 75.1 0.46 3.3E-05 41.5 1.5 11 428-438 3-13 (190)
71 d1xjca_ c.37.1.10 (A:) Molybdo 74.1 0.88 6.4E-05 38.3 3.1 22 426-447 2-40 (165)
72 d1rz3a_ c.37.1.6 (A:) Hypothet 74.1 0.5 3.7E-05 40.8 1.5 12 427-438 24-35 (198)
73 d1szpa2 c.37.1.11 (A:145-395) 73.7 0.65 4.7E-05 41.5 2.3 17 422-438 31-47 (251)
74 d1e32a2 c.37.1.20 (A:201-458) 73.4 1.3 9.5E-05 40.5 4.4 61 512-572 91-170 (258)
75 d1qhxa_ c.37.1.3 (A:) Chloramp 72.6 0.72 5.2E-05 38.8 2.2 14 425-438 3-16 (178)
76 d1qf9a_ c.37.1.1 (A:) UMP/CMP 72.3 0.58 4.2E-05 40.6 1.5 15 424-438 5-19 (194)
77 d1v5wa_ c.37.1.11 (A:) Meiotic 71.3 0.65 4.7E-05 41.8 1.6 17 422-438 34-50 (258)
78 d1rkba_ c.37.1.1 (A:) Adenylat 71.0 0.63 4.6E-05 39.1 1.3 12 427-438 6-17 (173)
79 d3adka_ c.37.1.1 (A:) Adenylat 70.1 0.54 3.9E-05 41.0 0.7 17 422-438 5-21 (194)
80 d1x6va3 c.37.1.4 (A:34-228) Ad 69.8 0.48 3.5E-05 40.9 0.2 15 424-438 18-32 (195)
81 d1teva_ c.37.1.1 (A:) UMP/CMP 69.7 2.9 0.00021 35.7 5.7 12 427-438 3-14 (194)
82 d1khta_ c.37.1.1 (A:) Adenylat 69.1 0.92 6.7E-05 38.4 2.1 14 425-438 1-14 (190)
83 d2i1qa2 c.37.1.11 (A:65-322) D 68.8 0.84 6.1E-05 40.8 1.8 17 422-438 31-47 (258)
84 d1lw7a2 c.37.1.1 (A:220-411) T 68.7 0.69 5.1E-05 39.2 1.1 13 426-438 8-20 (192)
85 d1u0la2 c.37.1.8 (A:69-293) Pr 67.5 1.1 7.7E-05 40.2 2.1 37 424-460 94-133 (225)
86 d2bdta1 c.37.1.25 (A:1-176) Hy 67.3 0.86 6.2E-05 38.1 1.4 13 426-438 3-15 (176)
87 d1kaga_ c.37.1.2 (A:) Shikimat 67.3 0.88 6.4E-05 37.5 1.5 13 426-438 3-15 (169)
88 d1yksa1 c.37.1.14 (A:185-324) 67.0 0.91 6.7E-05 36.4 1.5 17 422-438 4-20 (140)
89 d1g41a_ c.37.1.20 (A:) HslU {H 65.6 1 7.2E-05 44.9 1.7 13 426-438 50-62 (443)
90 d1g6oa_ c.37.1.11 (A:) Hexamer 64.6 7.6 0.00055 36.4 7.9 45 511-562 228-273 (323)
91 d1w1wa_ c.37.1.12 (A:) Smc hea 64.2 1.4 0.0001 42.9 2.5 19 420-438 20-38 (427)
92 d1odfa_ c.37.1.6 (A:) Hypothet 63.8 4.3 0.00031 37.5 5.8 50 427-476 29-109 (286)
93 d1qhla_ c.37.1.12 (A:) Cell di 62.8 0.14 1E-05 44.7 -5.1 23 415-438 15-37 (222)
94 d1uf9a_ c.37.1.1 (A:) Dephosph 61.3 1.3 9.7E-05 38.0 1.5 13 426-438 4-16 (191)
95 d1ukza_ c.37.1.1 (A:) Uridylat 61.2 1.3 9.7E-05 38.2 1.5 14 425-438 8-21 (196)
96 d1q3ta_ c.37.1.1 (A:) CMP kina 60.7 1.5 0.00011 38.6 1.7 12 427-438 5-16 (223)
97 d1ckea_ c.37.1.1 (A:) CMP kina 60.3 1.5 0.00011 38.4 1.8 12 427-438 5-16 (225)
98 d2gnoa2 c.37.1.20 (A:11-208) g 60.0 9 0.00065 33.0 7.0 44 518-562 79-122 (198)
99 d1e4va1 c.37.1.1 (A:1-121,A:15 59.8 1.5 0.00011 37.2 1.5 12 427-438 2-13 (179)
100 d1zina1 c.37.1.1 (A:1-125,A:16 59.5 1.6 0.00012 36.9 1.8 12 427-438 2-13 (182)
101 d1a5ta2 c.37.1.20 (A:1-207) de 58.9 14 0.00099 31.8 8.1 43 518-561 108-150 (207)
102 d1s3ga1 c.37.1.1 (A:1-125,A:16 58.1 1.8 0.00013 36.8 1.8 12 427-438 2-13 (182)
103 d1yrba1 c.37.1.10 (A:1-244) AT 58.0 2.6 0.00019 37.3 3.0 21 427-447 2-38 (244)
104 d1viaa_ c.37.1.2 (A:) Shikimat 57.6 1.7 0.00012 36.4 1.5 12 427-438 2-13 (161)
105 d1knxa2 c.91.1.2 (A:133-309) H 57.1 2.4 0.00017 36.3 2.3 24 414-438 5-28 (177)
106 d1r8sa_ c.37.1.8 (A:) ADP-ribo 57.0 1.9 0.00014 35.2 1.8 12 427-438 2-13 (160)
107 d1upta_ c.37.1.8 (A:) ADP-ribo 55.3 2.1 0.00016 35.2 1.8 12 427-438 7-18 (169)
108 d1zaka1 c.37.1.1 (A:3-127,A:15 55.1 1.7 0.00013 37.2 1.1 12 427-438 5-16 (189)
109 d1ofha_ c.37.1.20 (A:) HslU {H 54.9 2.1 0.00015 40.2 1.7 15 424-438 48-62 (309)
110 d1e6ca_ c.37.1.2 (A:) Shikimat 53.9 2.1 0.00015 36.0 1.5 13 426-438 3-15 (170)
111 d1xpua3 c.37.1.11 (A:129-417) 53.2 2.1 0.00015 39.8 1.4 19 420-438 38-56 (289)
112 d1m7ga_ c.37.1.4 (A:) Adenosin 53.1 2.3 0.00017 37.3 1.6 17 422-438 21-37 (208)
113 d1jjva_ c.37.1.1 (A:) Dephosph 52.8 2.4 0.00018 36.9 1.8 12 427-438 4-15 (205)
114 d2a5yb3 c.37.1.20 (B:109-385) 52.8 46 0.0034 29.6 11.2 50 503-562 119-169 (277)
115 d2ak3a1 c.37.1.1 (A:0-124,A:16 52.7 2.8 0.0002 36.0 2.2 15 424-438 5-19 (189)
116 d1nn5a_ c.37.1.1 (A:) Thymidyl 51.2 2.8 0.00021 36.7 2.0 16 423-438 1-16 (209)
117 d2qtvb1 c.37.1.8 (B:24-189) SA 51.2 2.7 0.0002 34.2 1.8 12 427-438 2-13 (166)
118 d2cdna1 c.37.1.1 (A:1-181) Ade 50.5 2.8 0.0002 35.4 1.8 12 427-438 2-13 (181)
119 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 50.4 2.3 0.00017 35.6 1.2 16 424-439 12-27 (186)
120 d1qdea_ c.37.1.19 (A:) Initiat 48.7 4.6 0.00034 35.3 3.0 35 516-550 149-183 (212)
121 d2p67a1 c.37.1.10 (A:1-327) LA 48.6 4 0.00029 38.5 2.7 15 424-438 53-67 (327)
122 d4tmka_ c.37.1.1 (A:) Thymidyl 48.4 3.3 0.00024 36.0 1.9 15 424-438 1-15 (210)
123 d1wf3a1 c.37.1.8 (A:3-180) GTP 47.9 3.3 0.00024 34.9 1.8 44 515-560 81-126 (178)
124 d1t9ha2 c.37.1.8 (A:68-298) Pr 47.9 1.6 0.00012 39.0 -0.3 15 424-438 96-110 (231)
125 d1svia_ c.37.1.8 (A:) Probable 47.8 2.9 0.00021 35.8 1.4 12 427-438 25-36 (195)
126 d1kkma_ c.91.1.2 (A:) HPr kina 47.5 4.6 0.00033 34.3 2.6 17 422-438 11-27 (176)
127 d1vhta_ c.37.1.1 (A:) Dephosph 47.4 3.3 0.00024 36.1 1.8 12 427-438 5-16 (208)
128 d2ooda1 b.92.1.4 (A:3-72,A:398 47.3 4.1 0.0003 33.2 2.1 25 565-589 32-56 (140)
129 d2iyva1 c.37.1.2 (A:2-166) Shi 46.9 2.9 0.00021 34.8 1.2 12 427-438 3-14 (165)
130 d1ksha_ c.37.1.8 (A:) ADP-ribo 46.4 3.6 0.00026 34.0 1.8 16 427-442 4-19 (165)
131 d1z2aa1 c.37.1.8 (A:8-171) Rab 46.2 3.6 0.00026 34.0 1.8 51 510-562 66-119 (164)
132 d1bifa1 c.37.1.7 (A:37-249) 6- 46.1 3.5 0.00026 35.4 1.8 12 427-438 4-15 (213)
133 d3raba_ c.37.1.8 (A:) Rab3a {R 45.9 3.7 0.00027 34.2 1.8 14 427-440 7-20 (169)
134 d1u94a1 c.37.1.11 (A:6-268) Re 45.9 4.5 0.00033 36.8 2.5 18 421-438 50-67 (263)
135 d2a5ja1 c.37.1.8 (A:9-181) Rab 44.7 4 0.00029 34.1 1.8 49 510-560 67-119 (173)
136 d1akya1 c.37.1.1 (A:3-130,A:16 44.5 3.9 0.00029 34.5 1.8 13 426-438 3-15 (180)
137 d1nksa_ c.37.1.1 (A:) Adenylat 44.5 3.2 0.00023 34.8 1.2 12 427-438 3-14 (194)
138 d1ky3a_ c.37.1.8 (A:) Rab-rela 44.3 4 0.00029 34.0 1.8 16 427-442 4-19 (175)
139 d1xtqa1 c.37.1.8 (A:3-169) GTP 44.1 3.8 0.00028 34.0 1.5 13 426-438 5-17 (167)
140 d2erxa1 c.37.1.8 (A:6-176) di- 43.7 4.2 0.0003 33.8 1.8 15 427-441 4-18 (171)
141 d2fu5c1 c.37.1.8 (C:3-175) Rab 43.6 4.2 0.00031 33.9 1.8 17 427-443 8-24 (173)
142 d2fnaa2 c.37.1.20 (A:1-283) Ar 43.6 4.1 0.0003 36.4 1.9 15 424-438 28-42 (283)
143 d1ctqa_ c.37.1.8 (A:) cH-p21 R 43.5 3.9 0.00029 33.8 1.5 15 427-441 5-19 (166)
144 d1lnza2 c.37.1.8 (A:158-342) O 43.4 3.9 0.00028 34.5 1.6 12 427-438 3-14 (185)
145 d1kaoa_ c.37.1.8 (A:) Rap2a {H 43.3 4.2 0.00031 33.6 1.8 57 504-562 60-121 (167)
146 d1p5zb_ c.37.1.1 (B:) Deoxycyt 43.3 4 0.00029 35.9 1.7 15 424-438 1-15 (241)
147 d2atva1 c.37.1.8 (A:5-172) Ras 43.1 4.3 0.00031 33.7 1.8 15 427-441 4-18 (168)
148 d1mkya1 c.37.1.8 (A:2-172) Pro 42.9 4.3 0.00032 33.7 1.8 53 507-562 69-122 (171)
149 d1gvnb_ c.37.1.21 (B:) Plasmid 42.8 4.1 0.0003 36.5 1.7 13 426-438 33-45 (273)
150 d2bmfa2 c.37.1.14 (A:178-482) 42.8 4 0.00029 37.5 1.6 17 422-438 6-22 (305)
151 d1nrjb_ c.37.1.8 (B:) Signal r 42.7 4.3 0.00032 34.8 1.8 12 427-438 5-16 (209)
152 d1ko7a2 c.91.1.2 (A:130-298) H 42.5 5.7 0.00042 33.4 2.4 19 420-438 10-28 (169)
153 d2jdid3 c.37.1.11 (D:82-357) C 42.5 4.3 0.00031 37.2 1.7 20 419-438 62-81 (276)
154 d1mh1a_ c.37.1.8 (A:) Rac {Hum 42.4 4.5 0.00033 34.1 1.8 48 513-562 71-122 (183)
155 d2gjsa1 c.37.1.8 (A:91-258) Ra 41.7 4.7 0.00034 33.5 1.8 56 504-561 57-117 (168)
156 d2erya1 c.37.1.8 (A:10-180) r- 41.6 4.3 0.00032 33.8 1.5 14 427-440 7-20 (171)
157 d1zj6a1 c.37.1.8 (A:2-178) ADP 41.4 4.4 0.00032 33.6 1.5 16 423-438 13-28 (177)
158 d2f9la1 c.37.1.8 (A:8-182) Rab 41.0 4.9 0.00035 33.6 1.8 48 513-562 71-122 (175)
159 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 40.5 4.6 0.00034 33.8 1.5 49 511-561 66-118 (177)
160 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 40.4 5.1 0.00037 33.2 1.8 52 510-564 67-123 (170)
161 d1z08a1 c.37.1.8 (A:17-183) Ra 39.9 5.2 0.00038 33.1 1.8 13 427-439 5-17 (167)
162 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 39.7 5.2 0.00038 33.7 1.8 16 427-442 4-19 (184)
163 d2vp4a1 c.37.1.1 (A:12-208) De 39.7 5 0.00037 34.1 1.7 15 424-438 8-22 (197)
164 d1z06a1 c.37.1.8 (A:32-196) Ra 39.6 5.3 0.00038 32.8 1.8 60 501-562 58-122 (165)
165 d1yzqa1 c.37.1.8 (A:14-177) Ra 39.5 4.9 0.00036 33.0 1.5 51 510-562 64-118 (164)
166 d1mkya2 c.37.1.8 (A:173-358) P 39.1 4.8 0.00035 33.8 1.4 12 427-438 10-21 (186)
167 d2cxxa1 c.37.1.8 (A:2-185) GTP 39.1 4.8 0.00035 33.7 1.4 12 427-438 2-13 (184)
168 d1g16a_ c.37.1.8 (A:) Rab-rela 39.0 5.1 0.00037 33.1 1.5 16 427-442 4-19 (166)
169 d2f7sa1 c.37.1.8 (A:5-190) Rab 39.0 5.4 0.00039 33.6 1.8 54 503-560 72-132 (186)
170 d1i2ma_ c.37.1.8 (A:) Ran {Hum 38.9 5 0.00037 33.4 1.5 60 502-561 59-119 (170)
171 d1tmka_ c.37.1.1 (A:) Thymidyl 38.8 5.8 0.00042 34.6 2.0 15 424-438 2-16 (214)
172 d1c1ya_ c.37.1.8 (A:) Rap1A {H 38.8 5.6 0.0004 32.9 1.8 50 510-562 66-121 (167)
173 d1wmsa_ c.37.1.8 (A:) Rab9a {H 38.6 5.5 0.0004 33.1 1.8 16 427-442 8-23 (174)
174 d1fzqa_ c.37.1.8 (A:) ADP-ribo 38.6 5.2 0.00038 33.3 1.5 12 427-438 18-29 (176)
175 d1puia_ c.37.1.8 (A:) Probable 38.5 5.1 0.00037 33.3 1.5 13 426-438 17-29 (188)
176 d1z0fa1 c.37.1.8 (A:8-173) Rab 38.3 5.7 0.00042 32.7 1.8 16 427-442 6-21 (166)
177 d2fh5b1 c.37.1.8 (B:63-269) Si 38.1 6 0.00043 34.0 1.9 26 501-526 54-81 (207)
178 d1zd9a1 c.37.1.8 (A:18-181) AD 38.0 5.8 0.00042 32.6 1.8 16 427-442 4-19 (164)
179 d1z0ja1 c.37.1.8 (A:2-168) Rab 37.8 5.8 0.00043 32.7 1.8 16 427-442 6-21 (167)
180 d1r2qa_ c.37.1.8 (A:) Rab5a {H 37.6 5.9 0.00043 32.8 1.8 16 427-442 8-23 (170)
181 d2fn4a1 c.37.1.8 (A:24-196) r- 37.1 5.6 0.00041 33.1 1.5 16 427-442 8-23 (173)
182 d2ew1a1 c.37.1.8 (A:4-174) Rab 36.5 5.9 0.00043 32.9 1.5 16 427-442 7-22 (171)
183 d2qm8a1 c.37.1.10 (A:5-327) Me 36.4 7.9 0.00058 36.2 2.6 15 424-438 50-64 (323)
184 d2bmea1 c.37.1.8 (A:6-179) Rab 36.3 5.9 0.00043 32.9 1.5 56 504-561 63-122 (174)
185 d2g6ba1 c.37.1.8 (A:58-227) Ra 36.0 6.5 0.00047 32.5 1.8 15 427-441 8-22 (170)
186 d1a1va1 c.37.1.14 (A:190-325) 35.9 6.7 0.00049 31.1 1.8 33 513-546 89-121 (136)
187 d1m7ba_ c.37.1.8 (A:) RhoE (RN 35.5 6.2 0.00045 33.1 1.5 14 427-440 4-17 (179)
188 d1udxa2 c.37.1.8 (A:157-336) O 35.3 4.9 0.00036 33.7 0.8 11 428-438 4-14 (180)
189 d2ngra_ c.37.1.8 (A:) CDC42 {H 34.7 6.5 0.00047 33.3 1.5 50 511-562 67-120 (191)
190 d2atxa1 c.37.1.8 (A:9-193) Rho 34.6 6.5 0.00047 33.2 1.5 50 511-562 73-126 (185)
191 d1x1ra1 c.37.1.8 (A:10-178) Ra 34.5 7.1 0.00052 32.3 1.8 14 427-440 6-19 (169)
192 d1h65a_ c.37.1.8 (A:) Chloropl 33.8 6.7 0.00049 35.3 1.5 12 427-438 34-45 (257)
193 d1moza_ c.37.1.8 (A:) ADP-ribo 33.4 6.1 0.00045 33.1 1.2 16 424-439 16-31 (182)
194 d1zl0a2 c.23.16.7 (A:3-169) LD 33.4 49 0.0036 27.2 7.0 64 422-521 9-77 (167)
195 d1r6bx2 c.37.1.20 (X:169-436) 33.2 6 0.00044 36.0 1.1 17 425-441 39-55 (268)
196 d1xzpa2 c.37.1.8 (A:212-371) T 33.2 3.8 0.00028 33.5 -0.3 12 427-438 2-13 (160)
197 d1u8za_ c.37.1.8 (A:) Ras-rela 32.8 7.9 0.00058 32.0 1.8 15 427-441 6-20 (168)
198 d1fx0a3 c.37.1.11 (A:97-372) C 32.6 4.2 0.00031 37.3 -0.1 19 420-438 62-80 (276)
199 d1r6bx3 c.37.1.20 (X:437-751) 32.4 7.2 0.00053 36.3 1.6 13 426-438 53-65 (315)
200 d1htwa_ c.37.1.18 (A:) Hypothe 32.4 7.9 0.00058 32.1 1.6 18 421-438 29-46 (158)
201 d2bcgy1 c.37.1.8 (Y:3-196) GTP 32.2 7.5 0.00055 33.0 1.5 12 427-438 8-19 (194)
202 d1gkub1 c.37.1.16 (B:1-250) He 32.2 5.5 0.0004 35.2 0.6 16 423-438 56-71 (237)
203 d2jdia3 c.37.1.11 (A:95-379) C 32.1 4.5 0.00032 37.3 -0.0 21 418-438 61-81 (285)
204 d2g3ya1 c.37.1.8 (A:73-244) GT 32.0 8.2 0.0006 32.0 1.8 54 503-561 64-123 (172)
205 d1egaa1 c.37.1.8 (A:4-182) GTP 31.8 8.3 0.00061 31.9 1.8 12 427-438 7-18 (179)
206 d1sxja2 c.37.1.20 (A:295-547) 31.7 8.7 0.00063 33.9 2.0 52 518-571 123-181 (253)
207 d1zcba2 c.37.1.8 (A:47-75,A:20 31.0 8.7 0.00063 32.4 1.8 12 427-438 4-15 (200)
208 d1fnna2 c.37.1.20 (A:1-276) CD 30.9 9.5 0.00069 33.7 2.1 14 425-438 43-56 (276)
209 d1x3sa1 c.37.1.8 (A:2-178) Rab 30.3 9.2 0.00067 31.8 1.8 12 427-438 9-20 (177)
210 d2bmja1 c.37.1.8 (A:66-240) Ce 29.7 9.4 0.00069 31.9 1.7 14 427-440 7-20 (175)
211 d1mo6a1 c.37.1.11 (A:1-269) Re 29.6 10 0.00076 34.3 2.1 18 421-438 56-73 (269)
212 d1iqpa2 c.37.1.20 (A:2-232) Re 29.4 8.8 0.00064 33.5 1.5 45 517-562 108-152 (231)
213 d1in4a2 c.37.1.20 (A:17-254) H 29.0 9.7 0.0007 33.3 1.8 12 427-438 37-48 (238)
214 d1um8a_ c.37.1.20 (A:) ClpX {H 28.9 8.8 0.00064 36.6 1.5 11 428-438 71-81 (364)
215 d2p6ra3 c.37.1.19 (A:1-202) He 27.8 5.2 0.00038 34.4 -0.4 16 423-438 38-53 (202)
216 d1xp8a1 c.37.1.11 (A:15-282) R 25.8 14 0.001 33.4 2.3 18 421-438 53-70 (268)
217 d1sxjd2 c.37.1.20 (D:26-262) R 25.6 11 0.00082 32.7 1.5 41 519-560 109-149 (237)
218 d1e0sa_ c.37.1.8 (A:) ADP-ribo 25.6 10 0.00074 31.3 1.2 14 426-439 13-26 (173)
219 d1deka_ c.37.1.1 (A:) Deoxynuc 25.4 12 0.00089 32.7 1.8 13 426-438 2-14 (241)
220 d1svsa1 c.37.1.8 (A:32-60,A:18 25.3 13 0.00092 31.0 1.8 12 427-438 4-15 (195)
221 d1svma_ c.37.1.20 (A:) Papillo 25.3 13 0.00093 35.3 1.9 18 421-438 150-167 (362)
222 d1njfa_ c.37.1.20 (A:) delta p 24.9 30 0.0022 30.1 4.4 43 519-562 116-158 (239)
223 d1e9ra_ c.37.1.11 (A:) Bacteri 24.8 11 0.00077 36.5 1.3 39 521-562 279-318 (433)
224 d1ye8a1 c.37.1.11 (A:1-178) Hy 24.8 85 0.0062 24.9 7.3 59 494-558 105-163 (178)
225 d1jqlb_ c.37.1.20 (B:) delta s 23.4 41 0.003 26.4 4.6 46 515-560 73-118 (140)
226 d1azta2 c.37.1.8 (A:35-65,A:20 23.3 14 0.001 32.0 1.8 13 426-438 7-19 (221)
227 d1qvra3 c.37.1.20 (A:536-850) 23.1 12 0.00087 34.7 1.2 33 511-548 117-150 (315)
228 d1tq4a_ c.37.1.8 (A:) Interfer 23.0 13 0.00095 35.8 1.5 45 511-559 128-172 (400)
229 d1ixsb2 c.37.1.20 (B:4-242) Ho 22.3 14 0.001 32.2 1.5 30 515-545 84-113 (239)
230 d1sxjb2 c.37.1.20 (B:7-230) Re 21.2 16 0.0011 31.6 1.5 44 518-562 101-144 (224)
231 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 20.3 17 0.0012 30.2 1.5 12 427-438 4-15 (200)
No 1
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=5.8e-66 Score=506.44 Aligned_cols=210 Identities=51% Similarity=0.815 Sum_probs=201.0
Q ss_pred CCCCCCCcEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc------------------------------
Q 007337 389 PLGDQDGEVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------ 438 (607)
Q Consensus 389 ~~~~~~~~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------ 438 (607)
|....+++|+|+||+|+|++. ++++|+||||+|++||++||||+|||||
T Consensus 9 pl~~~~g~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~ 87 (255)
T d2hyda1 9 PIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 87 (255)
T ss_dssp CCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCH
T ss_pred CCCCCCCEEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCH
Confidence 333456789999999999875 5689999999999999999999999999
Q ss_pred ------eEEEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHH
Q 007337 439 ------ISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIA 512 (607)
Q Consensus 439 ------i~~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialA 512 (607)
|+||+|+|++|++||+|||++|++ ..+++++++|++.+++++++..||+||+|.+||+|.+|||||||||+||
T Consensus 88 ~~lr~~i~~v~Q~~~lf~~Ti~eNi~~g~~-~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~iA 166 (255)
T d2hyda1 88 GSLRNQIGLVQQDNILFSDTVKENILLGRP-TATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIA 166 (255)
T ss_dssp HHHHHTEEEECSSCCCCSSBHHHHHGGGCS-SCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHHHH
T ss_pred HHhhheeeeeeccccCCCCCHHHHHhccCc-CCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhcCCch
Q 007337 513 RALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVY 592 (607)
Q Consensus 513 RAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~~g~y 592 (607)
|||+++|+|||||||||+||+++++.|.+.|+++.+++|+|+||||++.++.||+|++|++|+|++.|+|+||+++++.|
T Consensus 167 Ral~~~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~~~~~~D~ii~l~~G~iv~~G~~~eLl~~~~~y 246 (255)
T d2hyda1 167 RIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAY 246 (255)
T ss_dssp HHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHHHTTSHH
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCcHH
Confidence 99999999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 007337 593 TALVKRQL 600 (607)
Q Consensus 593 ~~l~~~~~ 600 (607)
++||+.|.
T Consensus 247 ~~l~~~Q~ 254 (255)
T d2hyda1 247 EHLYSIQN 254 (255)
T ss_dssp HHHHTTTT
T ss_pred HHHHHHcC
Confidence 99998764
No 2
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.3e-64 Score=493.36 Aligned_cols=204 Identities=48% Similarity=0.740 Sum_probs=196.3
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc------------------------------------e
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------I 439 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------i 439 (607)
+|+|+||||+|++. .+++|+||||+|++||++||||+||||| |
T Consensus 1 eI~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i 79 (241)
T d2pmka1 1 DITFRNIRFRYKPD-SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQV 79 (241)
T ss_dssp EEEEEEEEEESSTT-SCEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHE
T ss_pred CeEEEEEEEEeCCC-CcceEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceE
Confidence 48999999999865 5679999999999999999999999999 9
Q ss_pred EEEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhcCC
Q 007337 440 SIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNP 519 (607)
Q Consensus 440 ~~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~~~ 519 (607)
+||||+|++|++||+|||+++.+ ..++++++++++.+++++++..+|+|++|.+|++|.+|||||||||+|||||+++|
T Consensus 80 ~~v~Q~~~lf~~Ti~eNi~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRvalARal~~~p 158 (241)
T d2pmka1 80 GVVLQDNVLLNRSIIDNISLANP-GMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNP 158 (241)
T ss_dssp EEECSSCCCTTSBHHHHHCTTST-TCCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEecccccCCccccccccccCc-cccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhhhhhhhccc
Confidence 99999999999999999999986 78999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhc-CCchHHHHHH
Q 007337 520 RILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSK-GGVYTALVKR 598 (607)
Q Consensus 520 ~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~-~g~y~~l~~~ 598 (607)
+|||||||||+||+.+++.|.+.|+++.+++|+|+||||+++++.||+|+||++|+|+|+|+|+||+++ ++.|++||+.
T Consensus 159 ~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~~~D~i~vl~~G~Iv~~G~~~ell~~~~~~y~~l~~~ 238 (241)
T d2pmka1 159 KILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQL 238 (241)
T ss_dssp SEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGGGTTSSEEEEEETTEEEEEECHHHHHHSTTCHHHHHHHH
T ss_pred chhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999976 6799999998
Q ss_pred hhc
Q 007337 599 QLQ 601 (607)
Q Consensus 599 ~~~ 601 (607)
|.+
T Consensus 239 Q~d 241 (241)
T d2pmka1 239 QSD 241 (241)
T ss_dssp HCC
T ss_pred hcC
Confidence 853
No 3
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=3.3e-64 Score=495.06 Aligned_cols=208 Identities=53% Similarity=0.777 Sum_probs=200.0
Q ss_pred CCCCcEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc---------------------------------
Q 007337 392 DQDGEVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK--------------------------------- 438 (607)
Q Consensus 392 ~~~~~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK--------------------------------- 438 (607)
...|.|+|+||+|+|+++ +.++|+||||+|++||++||||||||||
T Consensus 9 ~~~g~I~~~nvsf~Y~~~-~~~~L~~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~ 87 (253)
T d3b60a1 9 RATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASL 87 (253)
T ss_dssp CCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHH
T ss_pred CCceEEEEEEEEEEeCCC-CCceeeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhh
Confidence 345789999999999875 5689999999999999999999999999
Q ss_pred ---eEEEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHH
Q 007337 439 ---ISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARAL 515 (607)
Q Consensus 439 ---i~~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAl 515 (607)
++||||+|++|++|+++|+.++.+...++++++++++.++++++++.||+|++|.+|++|.+|||||||||+|||||
T Consensus 88 r~~i~~v~Q~~~l~~~ti~~n~~~~~~~~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRvaiARal 167 (253)
T d3b60a1 88 RNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARAL 167 (253)
T ss_dssp HHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHH
T ss_pred hheEEEEeeccccCCcchhhhhhhcCcccCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999997657899999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhcCCchHHH
Q 007337 516 MMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTAL 595 (607)
Q Consensus 516 l~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~~g~y~~l 595 (607)
+++|+|||||||||+||+++++.|.+.|+++.+++|+|+||||++.++.||+|+||++|+|+|+|+|+||+++++.|++|
T Consensus 168 ~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~~~D~v~vl~~G~Iv~~G~~~eLl~~~~~y~~l 247 (253)
T d3b60a1 168 LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQL 247 (253)
T ss_dssp HHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHTSSHHHH
T ss_pred hcCCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh
Q 007337 596 VKRQL 600 (607)
Q Consensus 596 ~~~~~ 600 (607)
|+.|.
T Consensus 248 ~~~Q~ 252 (253)
T d3b60a1 248 HKMQF 252 (253)
T ss_dssp HHHTC
T ss_pred HHHcc
Confidence 99874
No 4
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-62 Score=481.21 Aligned_cols=205 Identities=47% Similarity=0.753 Sum_probs=195.1
Q ss_pred CCCcEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc----------------------------------
Q 007337 393 QDGEVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK---------------------------------- 438 (607)
Q Consensus 393 ~~~~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK---------------------------------- 438 (607)
.++.|+|+||+|+|+++++.++|+||||+|++||++||||||||||
T Consensus 8 ~~g~I~~~nvsf~Y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r 87 (251)
T d1jj7a_ 8 LEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLH 87 (251)
T ss_dssp CCCCEEEEEEEECCTTSTTCCSEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHH
T ss_pred ccceEEEEEEEEECCCCCCCEeEeceEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHH
Confidence 4578999999999987656679999999999999999999999999
Q ss_pred --eEEEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHh
Q 007337 439 --ISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALM 516 (607)
Q Consensus 439 --i~~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll 516 (607)
|+||+|+|++|++||+|||.+|.....+++++.++++.++++++++.||+|++|.++++|.+|||||||||+|||||+
T Consensus 88 ~~i~~v~Q~~~lf~~tv~eni~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal~ 167 (251)
T d1jj7a_ 88 RQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALI 167 (251)
T ss_dssp HHEEEECSSCCCCSSBHHHHHHCSCSSCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHHT
T ss_pred HHhhhccccccccCcchhhhhhhhhcccchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEEEEeeccc
Confidence 999999999999999999999954467889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhcCCchHH
Q 007337 517 MNPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTA 594 (607)
Q Consensus 517 ~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~~g~y~~ 594 (607)
++|+|+|||||||+||+.+++.|.+.|.++.+ ++|+|+||||+++++.||+|+||++|+|+|+|+|+||+++++.|++
T Consensus 168 ~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~~~~~aDrI~vl~~G~iv~~Gt~~eLl~~~~~y~~ 247 (251)
T d1jj7a_ 168 RKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTHQQLMEKKGCYWA 247 (251)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHHHHHTCSEEEEEETTEEEEEECHHHHHHHTSHHHH
T ss_pred cCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCcHHHH
Confidence 99999999999999999999999999988754 7999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 007337 595 LVK 597 (607)
Q Consensus 595 l~~ 597 (607)
||+
T Consensus 248 l~~ 250 (251)
T d1jj7a_ 248 MVQ 250 (251)
T ss_dssp HHC
T ss_pred Hhc
Confidence 985
No 5
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=9.7e-63 Score=481.34 Aligned_cols=203 Identities=48% Similarity=0.768 Sum_probs=195.0
Q ss_pred EEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc------------------------------------eE
Q 007337 397 VELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------IS 440 (607)
Q Consensus 397 I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------i~ 440 (607)
|+++||||+|++. +++|+||||+|++||++|||||||||| |+
T Consensus 2 le~knvsf~Y~~~--~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 79 (242)
T d1mv5a_ 2 LSARHVDFAYDDS--EQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIG 79 (242)
T ss_dssp EEEEEEEECSSSS--SCSEEEEEEEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCC
T ss_pred EEEEEEEEECCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHHhheE
Confidence 7999999999753 479999999999999999999999999 89
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhcCCC
Q 007337 441 IVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPR 520 (607)
Q Consensus 441 ~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~~~~ 520 (607)
||||+|++|++||+|||.++.....++++++++++.+++.+++..+|+|++|.+||+|.+|||||||||+|||||+++|+
T Consensus 80 ~v~Q~~~lf~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv~iARal~~~p~ 159 (242)
T d1mv5a_ 80 FVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPK 159 (242)
T ss_dssp EECCSSCCCCEEHHHHTTSCTTSCSCHHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCS
T ss_pred EEccccccCCcchhhheecccccccchhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998554688999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhcCCchHHHHHHhh
Q 007337 521 ILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQL 600 (607)
Q Consensus 521 IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~~g~y~~l~~~~~ 600 (607)
|||||||||+||+++++.|.+.|+++.+++|+|+||||++.++.||+|+||++|+|+++|+|+||+++++.|+++++.|.
T Consensus 160 ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~~~D~i~vl~~G~iv~~G~~~eLl~~~~~y~~l~~~Q~ 239 (242)
T d1mv5a_ 160 ILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLYAKYVSEQL 239 (242)
T ss_dssp EEEEECCSCSSCSSSCCHHHHHHHHHHTTSEEEEECCSHHHHHHCSEEEEEETTEECCCSCHHHHHHHCHHHHHHHHCCC
T ss_pred EEEecCCccccCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEEECCEEEEECCHHHHHhCChHHHHHHHHHh
Confidence 99999999999999999999999999899999999999999999999999999999999999999999999999999875
Q ss_pred c
Q 007337 601 Q 601 (607)
Q Consensus 601 ~ 601 (607)
.
T Consensus 240 ~ 240 (242)
T d1mv5a_ 240 T 240 (242)
T ss_dssp C
T ss_pred h
Confidence 3
No 6
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=7.5e-54 Score=427.49 Aligned_cols=196 Identities=29% Similarity=0.457 Sum_probs=179.3
Q ss_pred CcEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-----------------------eEEEccCCCcccc
Q 007337 395 GEVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK-----------------------ISIVSQEPVLFNC 451 (607)
Q Consensus 395 ~~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK-----------------------i~~V~Q~~~Lf~g 451 (607)
..|+|+|++|. ..|+|+||||+|++||++|||||||||| ++||||+|++|++
T Consensus 37 ~~i~~~~~~~~-----g~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~i~~v~Q~~~l~~~ 111 (281)
T d1r0wa_ 37 NNVSFSHLCLV-----GNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPG 111 (281)
T ss_dssp ---CHHHHHHT-----TCEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCSCEEEECSSCCCCSE
T ss_pred CcEEEEEcCCC-----CCeEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECCEEEEEeccccccCc
Confidence 45777776653 2479999999999999999999999999 9999999999999
Q ss_pred cHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhcCCCEEEEeccCCCC
Q 007337 452 SIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSAL 531 (607)
Q Consensus 452 TIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~~~~IllLDE~TSaL 531 (607)
||+|||.|+. ..++.+++++++.+++.+++..+|+|++|.++++|.+|||||||||+|||||+++|+|||||||||+|
T Consensus 112 tv~eni~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv~lARaL~~~p~illLDEPts~L 189 (281)
T d1r0wa_ 112 TIKENIIFGV--SYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYL 189 (281)
T ss_dssp EHHHHHTTTS--CCCHHHHHHHHHHTTCHHHHTTSTTGGGCEECTTCTTSCHHHHHHHHHHHHHHSCCSEEEEESCCCSS
T ss_pred eeeccccccc--cccchHHHHHHHHHHhHHHHHhchhhhhhhhhhhccCCCHHHHHHHHHHHHHHhCccchhhcCccccC
Confidence 9999999984 57889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHH-HHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEeEecChhHHhhcCCchHHHHH
Q 007337 532 DAESEYLVQDA-MDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVK 597 (607)
Q Consensus 532 D~~te~~i~~~-l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~~eL~~~~g~y~~l~~ 597 (607)
|+.+++.+.+. +....+++|+|+||||++.++.||+|++|++|+|++.|+|+||++.++.|++.+.
T Consensus 190 D~~~~~~i~~~~~~~~~~~~tvi~itH~~~~l~~aDrI~vl~~G~i~~~Gt~~eL~~~~~~~~~~~~ 256 (281)
T d1r0wa_ 190 DVFTEEQVFESCVCKLMANKTRILVTSKMEHLRKADKILILHQGSSYFYGTFSELQSLRPDFSSKLM 256 (281)
T ss_dssp CHHHHHHHHHHCCCCCTTTSEEEEECSCHHHHHTCSEEEEEETTEEEEEECHHHHHHHCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEechHHHHHhCCEEEEEECCEEEEECCHHHHhccCcHHHHHHc
Confidence 99999988876 4555678999999999999999999999999999999999999998888877654
No 7
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.5e-45 Score=354.04 Aligned_cols=179 Identities=32% Similarity=0.515 Sum_probs=130.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc----------------------------------eEEE
Q 007337 397 VELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK----------------------------------ISIV 442 (607)
Q Consensus 397 I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK----------------------------------i~~V 442 (607)
|+++||+++|++ ..+|+||||+|++||++||+||||||| ||||
T Consensus 1 Iev~nv~k~yg~---~~~l~~isl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v 77 (232)
T d2awna2 1 VQLQNVTKAWGE---VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMV 77 (232)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEE
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeee
Confidence 789999999963 479999999999999999999999999 9999
Q ss_pred ccCCCcccc-cHHHHhhcCCC-----CCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHh
Q 007337 443 SQEPVLFNC-SIEENIAYGCD-----GKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALM 516 (607)
Q Consensus 443 ~Q~~~Lf~g-TIreNI~~g~~-----~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll 516 (607)
+|+|.||+. |++|||.++.. .+..++++.++++..++.++....| .+||||||||++|||||+
T Consensus 78 ~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~-----------~~LSGGqkQRvaiAraL~ 146 (232)
T d2awna2 78 FQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRTLV 146 (232)
T ss_dssp CSSCCC---------------------CHHHHHHHHHHHHC--------------------------------CHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCChhhhhCCh-----------hhCCHHHHHHHHHHHHHh
Confidence 999999955 99999998742 1112355788888888877655544 679999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHhhcC
Q 007337 517 MNPRILLLDEATSALDAESEYLVQDAMDSLM--KGRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELLSKG 589 (607)
Q Consensus 517 ~~~~IllLDE~TSaLD~~te~~i~~~l~~~~--~~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~~~~ 589 (607)
.+|++++||||||+||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|+|++.|+++|++++.
T Consensus 147 ~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P 222 (232)
T d2awna2 147 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 222 (232)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSC
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEeCHHHHHhCC
Confidence 9999999999999999999999999998863 48999999999998766 9999999999999999999998763
No 8
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00 E-value=2.6e-45 Score=353.79 Aligned_cols=182 Identities=34% Similarity=0.539 Sum_probs=159.8
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
.|+++||+++|+.+ +..+|+||||+|++||+++|+|||||||
T Consensus 3 ~i~v~nlsk~y~~g-~~~aL~~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~~~r 81 (242)
T d1oxxk2 3 RIIVKNVSKVFKKG-KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPED 81 (242)
T ss_dssp CEEEEEEEEEEGGG-TEEEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGG
T ss_pred EEEEEeEEEEECCC-CEEEEeceEEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcchhh
Confidence 48999999999754 4578999999999999999999999999
Q ss_pred --eEEEccCCCcccc-cHHHHhhcCCC-CCCCH----HHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHH
Q 007337 439 --ISIVSQEPVLFNC-SIEENIAYGCD-GKASS----ADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVA 510 (607)
Q Consensus 439 --i~~V~Q~~~Lf~g-TIreNI~~g~~-~~~~~----~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRia 510 (607)
||||+|+|.||+. |++|||.++-. ...+. +++.++++.+++.++....| ..||||||||++
T Consensus 82 r~ig~vfQ~~~L~p~ltv~eni~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p-----------~~LSGGqkQRva 150 (242)
T d1oxxk2 82 RKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFP-----------RELSGAQQQRVA 150 (242)
T ss_dssp SCEEEEETTSCCCTTSCHHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCG-----------GGSCHHHHHHHH
T ss_pred ccceEEeccccccccccHHHHhhhhhHhhcCCHHHHHHHHHHHHhhcChHhhhhCCh-----------hhCCHHHHhHHH
Confidence 9999999999975 99999998732 12333 45788888888877655544 569999999999
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhh-hhcCEEEEEeCCEEeEecChhHHhh
Q 007337 511 IARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTV-QSADTVAVVSDGEIVESGTHEELLS 587 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l-~~aD~Iivl~~G~Ive~G~~~eL~~ 587 (607)
|||||..+|+|+|||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+ +.||+|++|++|+|++.|+++|+.+
T Consensus 151 iARaL~~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~~~~~~~dri~vm~~G~iv~~g~~~el~~ 230 (242)
T d1oxxk2 151 LARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYD 230 (242)
T ss_dssp HHHHHTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHH
T ss_pred HHhHHhhcccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988743 89999999999987 5599999999999999999999987
Q ss_pred cC
Q 007337 588 KG 589 (607)
Q Consensus 588 ~~ 589 (607)
+.
T Consensus 231 ~P 232 (242)
T d1oxxk2 231 NP 232 (242)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 9
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=100.00 E-value=3.3e-45 Score=350.59 Aligned_cols=177 Identities=34% Similarity=0.567 Sum_probs=157.5
Q ss_pred EEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc----------------------------------eEEE
Q 007337 397 VELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK----------------------------------ISIV 442 (607)
Q Consensus 397 I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK----------------------------------i~~V 442 (607)
|+++|+|++|++ .+|+||||+|++||+++|+||||||| ||||
T Consensus 2 i~v~nlsk~y~~----~aL~~vs~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~~r~ig~v 77 (229)
T d3d31a2 2 IEIESLSRKWKN----FSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFV 77 (229)
T ss_dssp EEEEEEEEECSS----CEEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEE
T ss_pred EEEEEEEEEeCC----EEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchhHhcceee
Confidence 789999999953 48999999999999999999999999 9999
Q ss_pred ccCCCccc-ccHHHHhhcCCC--CCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhcCC
Q 007337 443 SQEPVLFN-CSIEENIAYGCD--GKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNP 519 (607)
Q Consensus 443 ~Q~~~Lf~-gTIreNI~~g~~--~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~~~ 519 (607)
+|++.||+ -|++|||.++.. ...+++++.++++..++.++.+.. ...||||||||++|||||+.+|
T Consensus 78 ~Q~~~l~~~~tV~enl~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSGG~~QRvaiAraL~~~P 146 (229)
T d3d31a2 78 YQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRN-----------PLTLSGGEQQRVALARALVTNP 146 (229)
T ss_dssp CTTCCCCTTSCHHHHHHHHHHHHCCCCHHHHHHHHHHTTCTTTTTSC-----------GGGSCHHHHHHHHHHHHTTSCC
T ss_pred ccccccCccccHHHHHHHHHhhccccHHHHHHHHHHHhcchhhHhCC-----------hhhCCHHHhcchhhhhhhhccC
Confidence 99999996 599999987631 123567899999998887664433 4669999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHhhc
Q 007337 520 RILLLDEATSALDAESEYLVQDAMDSLM--KGRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELLSK 588 (607)
Q Consensus 520 ~IllLDE~TSaLD~~te~~i~~~l~~~~--~~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~~~ 588 (607)
+|||||||||+||+.+.+.+.+.|+++. .+.|+|+|||+++.+.. ||||++|++|+|++.|+++|++++
T Consensus 147 ~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~~~~~~drv~vm~~G~iv~~g~~~el~~~ 218 (229)
T d3d31a2 147 KILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEK 218 (229)
T ss_dssp SEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEESSSCEEEEECHHHHHSS
T ss_pred CceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999998864 37899999999987765 999999999999999999999875
No 10
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=100.00 E-value=4e-45 Score=352.92 Aligned_cols=180 Identities=29% Similarity=0.524 Sum_probs=157.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
.|+++||+++|++ .++|+||||+|++||+++|+|||||||
T Consensus 3 ~i~v~nl~k~yg~---~~al~~vsl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~ 79 (240)
T d1g2912 3 GVRLVDVWKVFGE---VTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPK 79 (240)
T ss_dssp EEEEEEEEEEETT---EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGG
T ss_pred cEEEEeEEEEECC---EEEEcceeeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccc
Confidence 4899999999963 469999999999999999999999999
Q ss_pred ---eEEEccCCCcccc-cHHHHhhcCCC-CCCC----HHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHH
Q 007337 439 ---ISIVSQEPVLFNC-SIEENIAYGCD-GKAS----SADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRV 509 (607)
Q Consensus 439 ---i~~V~Q~~~Lf~g-TIreNI~~g~~-~~~~----~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRi 509 (607)
|+||+|+|.||+. ||+||+.++.. ...+ ++++.++++.+++.++.... ...||||||||+
T Consensus 80 ~r~ig~v~Q~~~L~~~ltV~eni~~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~-----------p~~LSGGqkQRv 148 (240)
T d1g2912 80 DRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRK-----------PRELSGGQRQRV 148 (240)
T ss_dssp GSSEEEECSCCCCCTTSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCC-----------GGGSCHHHHHHH
T ss_pred cccceecccchhhcchhhhhHhhhhhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHH
Confidence 9999999999965 99999988621 1123 34577888888887654443 367999999999
Q ss_pred HHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHh
Q 007337 510 AIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELL 586 (607)
Q Consensus 510 alARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~ 586 (607)
+|||||..+|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++|++
T Consensus 149 ~IAraL~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~~~~~~drv~vm~~G~iv~~G~~~el~ 228 (240)
T d1g2912 149 ALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVY 228 (240)
T ss_dssp HHHHHHHTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHhcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999988743 8999999999998765 9999999999999999999998
Q ss_pred hcC
Q 007337 587 SKG 589 (607)
Q Consensus 587 ~~~ 589 (607)
++.
T Consensus 229 ~~P 231 (240)
T d1g2912 229 DKP 231 (240)
T ss_dssp HSC
T ss_pred hCC
Confidence 753
No 11
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=6.7e-45 Score=351.35 Aligned_cols=181 Identities=33% Similarity=0.501 Sum_probs=157.0
Q ss_pred EEEEeEEEECCCCCC-CcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 397 VELDDVWFAYPSRPN-HMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 397 I~~~~vsf~y~~~~~-~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
|+++|++++|+.+.. ..+|+||||+|++||.+||+|||||||
T Consensus 2 i~v~nlsk~y~~~~~~~~al~~vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~r 81 (240)
T d3dhwc1 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKAR 81 (240)
T ss_dssp EEEEEEEEEEECSSCEEEEEEEEEEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHH
T ss_pred EEEEeEEEEeCCCCeeEEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhh
Confidence 789999999976522 257999999999999999999999999
Q ss_pred --eEEEccCCCcccc-cHHHHhhcC-----CCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHH
Q 007337 439 --ISIVSQEPVLFNC-SIEENIAYG-----CDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVA 510 (607)
Q Consensus 439 --i~~V~Q~~~Lf~g-TIreNI~~g-----~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRia 510 (607)
||||+|++.+|+. |++|||.++ .+.+.-++++.++++.+++.+.... ....||||||||++
T Consensus 82 r~ig~VfQ~~~l~~~~tv~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~-----------~~~~LSGG~~QRva 150 (240)
T d3dhwc1 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDS-----------YPSNLSGGQKQRVA 150 (240)
T ss_dssp HHEEECCSSCCCCTTSBHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSS-----------CBSCCCHHHHHHHH
T ss_pred ccccccccccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 9999999999965 999999874 2211124568888998888764333 34579999999999
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHhh
Q 007337 511 IARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELLS 587 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~~ 587 (607)
|||||..+|++||||||||+||+.+.+.|++.|+++.+ +.|+|+|||+++.+.. ||||++|++|+|+|.|+++|+++
T Consensus 151 iAraL~~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHdl~~~~~~~dri~vl~~G~iv~~G~~~ei~~ 230 (240)
T d3dhwc1 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS 230 (240)
T ss_dssp HHHHHHTCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEBSCHHHHHHHCSEEEEEETTEEEEEEETTTTTC
T ss_pred HhhhhccCCCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999988643 7999999999998865 99999999999999999999986
Q ss_pred c
Q 007337 588 K 588 (607)
Q Consensus 588 ~ 588 (607)
+
T Consensus 231 ~ 231 (240)
T d3dhwc1 231 H 231 (240)
T ss_dssp S
T ss_pred C
Confidence 4
No 12
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=8.1e-45 Score=350.11 Aligned_cols=180 Identities=29% Similarity=0.494 Sum_probs=151.7
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc----------------------------------eEE
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK----------------------------------ISI 441 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK----------------------------------i~~ 441 (607)
.|+++|++++|++ ..+|+||||+|++||+++|+||||||| |||
T Consensus 6 ~I~v~nlsk~yg~---~~al~~vsl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~ 82 (239)
T d1v43a3 6 EVKLENLTKRFGN---FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISM 82 (239)
T ss_dssp CEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEE
T ss_pred eEEEEEEEEEECC---EEEEcceeEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEE
Confidence 4999999999963 479999999999999999999999999 999
Q ss_pred EccCCCccc-ccHHHHhhcCCC-CCCCH----HHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHH
Q 007337 442 VSQEPVLFN-CSIEENIAYGCD-GKASS----ADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARAL 515 (607)
Q Consensus 442 V~Q~~~Lf~-gTIreNI~~g~~-~~~~~----~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAl 515 (607)
|||+|.||+ -|++||+.++.. ...+. +++.++++.+++.++.. .....||||||||++|||||
T Consensus 83 v~Q~~~l~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSGGq~QRvaiAraL 151 (239)
T d1v43a3 83 VFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQIEELLN-----------RYPAQLSGGQRQRVAVARAI 151 (239)
T ss_dssp EEC------CCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTCGGGTT-----------SCTTTCCSSCHHHHHHHHHH
T ss_pred EeechhhcccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHHhhh
Confidence 999999995 699999998742 12343 34556777777765433 34567999999999999999
Q ss_pred hcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEeEecChhHHhhcC
Q 007337 516 MMNPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTVQ-SADTVAVVSDGEIVESGTHEELLSKG 589 (607)
Q Consensus 516 l~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l~-~aD~Iivl~~G~Ive~G~~~eL~~~~ 589 (607)
+.+|+|||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|+|++.|+.+|+.++.
T Consensus 152 ~~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P 228 (239)
T d1v43a3 152 VVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRP 228 (239)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHCC
T ss_pred ccCCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999988743 899999999999875 59999999999999999999998764
No 13
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=8.9e-45 Score=348.71 Aligned_cols=176 Identities=32% Similarity=0.478 Sum_probs=145.7
Q ss_pred EEEEeEEEECCCCCC-CcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 397 VELDDVWFAYPSRPN-HMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 397 I~~~~vsf~y~~~~~-~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
|+++||+++|+.... ..+|+||||+|++||.+||+|||||||
T Consensus 2 I~i~nlsk~y~~~~~~~~al~~isl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r 81 (230)
T d1l2ta_ 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIR 81 (230)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEeEEEEeCCCCeeEEEEeceEEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhh
Confidence 799999999975422 247999999999999999999999999
Q ss_pred ---eEEEccCCCccc-ccHHHHhhcCC----CCCCCHH----HHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHH
Q 007337 439 ---ISIVSQEPVLFN-CSIEENIAYGC----DGKASSA----DIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQK 506 (607)
Q Consensus 439 ---i~~V~Q~~~Lf~-gTIreNI~~g~----~~~~~~~----~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQk 506 (607)
||||+|+|.||+ -||+||+.++. ....+.+ ++.+.++..++.+.+ ......+||||||
T Consensus 82 ~~~ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~p~~LSGGqk 151 (230)
T d1l2ta_ 82 RDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERF----------ANHKPNQLSGGQQ 151 (230)
T ss_dssp HHHEEEECTTCCCCTTSCHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCGGG----------TTCCGGGSCHHHH
T ss_pred cceEEEEecchhhCcCccHHHHHhHHHHHhccCCCCHHHHHHHHHHHHHhhchhhhh----------hcCChhhCCHHHH
Confidence 999999999985 59999998742 0123333 344455555543321 1122357999999
Q ss_pred HHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEeEecCh
Q 007337 507 QRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLM--KGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTH 582 (607)
Q Consensus 507 QRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~--~~~TvI~ItHrl~~l~~aD~Iivl~~G~Ive~G~~ 582 (607)
||++|||||..+|+|||||||||+||+.+...|++.|+++. .++|+|+|||+++.++.||||++|++|+|+++|+.
T Consensus 152 QRvaIAraL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~~drv~~m~~G~Iv~~g~~ 229 (230)
T d1l2ta_ 152 QRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEKL 229 (230)
T ss_dssp HHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHHHHTTSSEEEEEETTEEEEEEEC
T ss_pred HHHHHHhhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHHHHHhCCEEEEEECCEEEEeccC
Confidence 99999999999999999999999999999999999999874 37899999999999999999999999999999863
No 14
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=1.9e-42 Score=339.79 Aligned_cols=189 Identities=33% Similarity=0.486 Sum_probs=160.5
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
.|+++|++++|++ .++|+||||+|++||++||+|||||||
T Consensus 2 ~Lev~nl~k~yg~---~~al~~vs~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~ 78 (258)
T d1b0ua_ 2 KLHVIDLHKRYGG---HEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKV 78 (258)
T ss_dssp CEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEE
T ss_pred eEEEEEEEEEECC---EEEEcceeeEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEeccCCccchhccc
Confidence 4899999999963 469999999999999999999999999
Q ss_pred ------------eEEEccCCCccc-ccHHHHhhcCC--CCCCC----HHHHHHHHHHcCchHHHH-hCCccccccccCCC
Q 007337 439 ------------ISIVSQEPVLFN-CSIEENIAYGC--DGKAS----SADIENAAKMANAHDFIS-NFPEKYQTFVGERG 498 (607)
Q Consensus 439 ------------i~~V~Q~~~Lf~-gTIreNI~~g~--~~~~~----~~~i~~al~~a~l~~~i~-~lp~G~~T~ige~G 498 (607)
|+||+|+|.+|+ -|++||+.++. ....+ ++++.++++.+++.+... ..|
T Consensus 79 ~~~~~~~~~r~~ig~vfQ~~~l~~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~p----------- 147 (258)
T d1b0ua_ 79 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYP----------- 147 (258)
T ss_dssp SCHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCHHHHTSCG-----------
T ss_pred ccHhHHHHHhcceEEEEechhhccchhcchhhhhhHHHhcCCCHHHHHHHHHHHHHHcCCchhhhccCc-----------
Confidence 899999999996 59999998751 11233 345777888888876543 233
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 007337 499 VRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLM-KGRTVLVIAHRLSTVQS-ADTVAVVSDGEI 576 (607)
Q Consensus 499 ~~LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~-~~~TvI~ItHrl~~l~~-aD~Iivl~~G~I 576 (607)
.+||||||||++|||||..+|+++|||||||+||+.+.+.|.+.|+++. +++|+|+|||+++.+.. ||||+||++|+|
T Consensus 148 ~~LSGG~~QRv~iAraL~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~~~~~adri~vm~~G~i 227 (258)
T d1b0ua_ 148 VHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 227 (258)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHHHHHHCSEEEEEETTEE
T ss_pred ccccHHHHHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 4699999999999999999999999999999999999999999998764 47999999999998765 999999999999
Q ss_pred eEecChhHHhhc-CCch-HHHHHH
Q 007337 577 VESGTHEELLSK-GGVY-TALVKR 598 (607)
Q Consensus 577 ve~G~~~eL~~~-~g~y-~~l~~~ 598 (607)
++.|+++|++++ ...| ++++..
T Consensus 228 v~~g~~~ev~~~P~~~~~~~ll~~ 251 (258)
T d1b0ua_ 228 EEEGDPEQVFGNPQSPRLQQFLKG 251 (258)
T ss_dssp EEEECHHHHHHSCCSHHHHHHHHH
T ss_pred EEEcCHHHHHhCCCCHHHHHHHhC
Confidence 999999999876 3334 455543
No 15
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=100.00 E-value=1.3e-41 Score=330.81 Aligned_cols=184 Identities=28% Similarity=0.453 Sum_probs=150.6
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
-|+++|++++|++ ..+|+||||+|++||++||+|||||||
T Consensus 6 ~Lev~~l~k~yg~---~~al~~vs~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~g 82 (240)
T d1ji0a_ 6 VLEVQSLHVYYGA---IHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMG 82 (240)
T ss_dssp EEEEEEEEEEETT---EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTT
T ss_pred EEEEeeEEEEECC---EEEEeeeeEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhc
Confidence 4899999999963 469999999999999999999999999
Q ss_pred eEEEccCCCcccc-cHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhc
Q 007337 439 ISIVSQEPVLFNC-SIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMM 517 (607)
Q Consensus 439 i~~V~Q~~~Lf~g-TIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~ 517 (607)
++|+||++.+|+. |++||+.++.....+.++..+.++.+ +..+ .++.........+||||||||++|||||+.
T Consensus 83 i~~~~q~~~l~~~ltv~en~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~l~~~~~~~~~~LSGG~~Qrv~iAraL~~ 156 (240)
T d1ji0a_ 83 IALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWI-----FSLF-PRLKERLKQLGGTLSGGEQQMLAIGRALMS 156 (240)
T ss_dssp EEEECSSCCCCTTSBHHHHHHGGGTTCCCSSHHHHHHHHH-----HHHC-HHHHTTTTSBSSSSCHHHHHHHHHHHHHTT
T ss_pred ccccCcccccCCcccHHHHHHHHHHhcCCHHHHHHHHHHH-----HHHh-hChHHHHhCchhhCCHHHHHHHHHHHHHHh
Confidence 8999999999975 99999988642122223333332221 0100 122222334456899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEeEecChhHHhhc
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLM-KGRTVLVIAHRLSTVQ-SADTVAVVSDGEIVESGTHEELLSK 588 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~-~~~TvI~ItHrl~~l~-~aD~Iivl~~G~Ive~G~~~eL~~~ 588 (607)
+|++||||||||+||+.+.+.+.+.|+++. +++|+|+|||+++.+. .||||+||++|+|++.|+++|+.++
T Consensus 157 ~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~~ 229 (240)
T d1ji0a_ 157 RPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDN 229 (240)
T ss_dssp CCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEEEHHHHHTC
T ss_pred CCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHhcC
Confidence 999999999999999999999999998864 5799999999998864 5999999999999999999999864
No 16
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.8e-41 Score=331.02 Aligned_cols=178 Identities=26% Similarity=0.404 Sum_probs=148.4
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------------
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK------------------------------------- 438 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK------------------------------------- 438 (607)
-++++|++++|++ .++|+||||+|++||++||+|||||||
T Consensus 4 iL~v~nlsk~yg~---~~aL~~vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~g 80 (254)
T d1g6ha_ 4 ILRTENIVKYFGE---FKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYG 80 (254)
T ss_dssp EEEEEEEEEEETT---EEEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHT
T ss_pred eEEEEEEEEEECC---eEEEcceEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEeccchhHHHHHHhc
Confidence 3899999999964 469999999999999999999999999
Q ss_pred eEEEccCCCcc-cccHHHHhhcCCCC--------------CCCHH----HHHHHHHHcCchHHHHhCCccccccccCCCC
Q 007337 439 ISIVSQEPVLF-NCSIEENIAYGCDG--------------KASSA----DIENAAKMANAHDFISNFPEKYQTFVGERGV 499 (607)
Q Consensus 439 i~~V~Q~~~Lf-~gTIreNI~~g~~~--------------~~~~~----~i~~al~~a~l~~~i~~lp~G~~T~ige~G~ 499 (607)
|+||||+|.+| +-|++|||.++... ..+++ +..++++..++.+. ......
T Consensus 81 i~~v~Q~~~~~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~ 149 (254)
T d1g6ha_ 81 IVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHL-----------YDRKAG 149 (254)
T ss_dssp EEECCCCCGGGGGSBHHHHHHGGGTSTTSCHHHHHHHCSSCCCCHHHHHHHHHHHHHTTCGGG-----------TTSBGG
T ss_pred CCccCCccccCCCCeeeeeeeehhhhccccchhhhhhhcccccHHHHHHHHHHHHHhcCcchh-----------ccCchh
Confidence 99999999987 57999999886310 01112 23334444443322 223456
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCCeEEEEccCchhh-hhcCEEEEEeCCEEe
Q 007337 500 RLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSL-MKGRTVLVIAHRLSTV-QSADTVAVVSDGEIV 577 (607)
Q Consensus 500 ~LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~-~~~~TvI~ItHrl~~l-~~aD~Iivl~~G~Iv 577 (607)
+||||||||++|||||..+|++|||||||++||+.+.+.+.+.|+++ .+++|+|+|||+++.+ +.||||+||++|+|+
T Consensus 150 ~LSgG~~Qrv~iAraL~~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~~~~~Drv~vm~~G~iv 229 (254)
T d1g6ha_ 150 ELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQII 229 (254)
T ss_dssp GSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTTGGGCSEEEEEETTEEE
T ss_pred hCCcHHHHHHHHHHHHHhCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhCCEEEEEeCCEEE
Confidence 79999999999999999999999999999999999999999999876 3579999999999987 569999999999999
Q ss_pred EecChhHHhh
Q 007337 578 ESGTHEELLS 587 (607)
Q Consensus 578 e~G~~~eL~~ 587 (607)
++|+++|+.+
T Consensus 230 ~~g~~~e~~~ 239 (254)
T d1g6ha_ 230 AEGRGEEEIK 239 (254)
T ss_dssp EEEESHHHHH
T ss_pred EEecHHHHhh
Confidence 9999999764
No 17
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.1e-40 Score=318.42 Aligned_cols=181 Identities=33% Similarity=0.509 Sum_probs=149.8
Q ss_pred EEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc----------------------------------eEEE
Q 007337 397 VELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK----------------------------------ISIV 442 (607)
Q Consensus 397 I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK----------------------------------i~~V 442 (607)
+++ ++..+|.+- .+ ||||+++ +|.++|+||||||| ||||
T Consensus 3 l~v-~~~k~~g~~----~~-~vs~~~~-~e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~~r~ig~v 75 (240)
T d2onka1 3 LKV-RAEKRLGNF----RL-NVDFEMG-RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFV 75 (240)
T ss_dssp EEE-EEEEEETTE----EE-EEEEEEC-SSEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCC
T ss_pred EEE-EEEEEECCE----EE-EEEEEeC-CEEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHHHcCceee
Confidence 444 456666432 23 7999995 68999999999999 9999
Q ss_pred ccCCCccc-ccHHHHhhcCCCCCCCH----HHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhc
Q 007337 443 SQEPVLFN-CSIEENIAYGCDGKASS----ADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMM 517 (607)
Q Consensus 443 ~Q~~~Lf~-gTIreNI~~g~~~~~~~----~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~ 517 (607)
||++.||+ -||+|||.|+-. ..+. +++.++++.+++.++.... ...||||||||++|||||++
T Consensus 76 ~Q~~~l~~~ltV~enl~~~l~-~~~~~~~~~~v~~~l~~~gl~~~~~~~-----------~~~LSGG~kQRvaiAral~~ 143 (240)
T d2onka1 76 PQDYALFPHLSVYRNIAYGLR-NVERVERDRRVREMAEKLGIAHLLDRK-----------PARLSGGERQRVALARALVI 143 (240)
T ss_dssp CSSCCCCTTSCHHHHHHTTCT-TSCHHHHHHHHHHHHHTTTCTTTTTCC-----------GGGSCHHHHHHHHHHHHHTT
T ss_pred ccchhhcccchhhHhhhhhhc-ccCHHHHHHHHHHHHHhcCcHhhhhCC-----------hhhCCHHHHHHHHHHHHHhc
Confidence 99999996 599999999853 4443 3466777777776554443 46799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHhhc-CCchH
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLMK--GRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELLSK-GGVYT 593 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~~~-~g~y~ 593 (607)
+|+|+|||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++|+++. +...+
T Consensus 144 ~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~~~~~~adri~vm~~G~ii~~G~~~el~~~~~~~v~ 223 (240)
T d2onka1 144 QPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVA 223 (240)
T ss_dssp CCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCCSSHH
T ss_pred cCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEecHHHHhcCCCHHHH
Confidence 9999999999999999999999999988743 7899999999998765 999999999999999999999975 44445
Q ss_pred HHH
Q 007337 594 ALV 596 (607)
Q Consensus 594 ~l~ 596 (607)
+++
T Consensus 224 ~fl 226 (240)
T d2onka1 224 EFL 226 (240)
T ss_dssp HHG
T ss_pred HHh
Confidence 544
No 18
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2.9e-40 Score=320.64 Aligned_cols=180 Identities=34% Similarity=0.515 Sum_probs=152.8
Q ss_pred CcEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-----------------------------------e
Q 007337 395 GEVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK-----------------------------------I 439 (607)
Q Consensus 395 ~~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK-----------------------------------i 439 (607)
|.|+++|++++|.+ .++|+||||+|++||++||+||||||| +
T Consensus 1 gaI~v~nl~k~yg~---~~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i 77 (238)
T d1vpla_ 1 GAVVVKDLRKRIGK---KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLI 77 (238)
T ss_dssp CCEEEEEEEEEETT---EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTE
T ss_pred CCEEEEeEEEEECC---EEEEccceeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhE
Confidence 46999999999964 479999999999999999999999999 9
Q ss_pred EEEccCCCccc-ccHHHHhhcCCC-CCCCHHHH----HHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHH
Q 007337 440 SIVSQEPVLFN-CSIEENIAYGCD-GKASSADI----ENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIAR 513 (607)
Q Consensus 440 ~~V~Q~~~Lf~-gTIreNI~~g~~-~~~~~~~i----~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialAR 513 (607)
+||||++.+|. -|++||+.+... ...+++++ .++++.+++.+. ..+...+||||||||++|||
T Consensus 78 ~~vpq~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~lSgG~~qrv~iA~ 146 (238)
T d1vpla_ 78 SYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEK-----------IKDRVSTYSKGMVRKLLIAR 146 (238)
T ss_dssp EEECTTCCCCTTSBHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCGGG-----------GGSBGGGCCHHHHHHHHHHH
T ss_pred eEeeeccccCCCccHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHH-----------HhhhhhhCCHHHHHHHHHHH
Confidence 99999998885 599999976421 02244444 444444554433 33445679999999999999
Q ss_pred HHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEeEecChhHHhhc
Q 007337 514 ALMMNPRILLLDEATSALDAESEYLVQDAMDSLM-KGRTVLVIAHRLSTVQS-ADTVAVVSDGEIVESGTHEELLSK 588 (607)
Q Consensus 514 All~~~~IllLDE~TSaLD~~te~~i~~~l~~~~-~~~TvI~ItHrl~~l~~-aD~Iivl~~G~Ive~G~~~eL~~~ 588 (607)
||+.+|+|+||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||||++|++|+|++.|+++|+.++
T Consensus 147 al~~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~~ 223 (238)
T d1vpla_ 147 ALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER 223 (238)
T ss_dssp HHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTTTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred HHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 9999999999999999999999999999998764 57999999999999875 999999999999999999999864
No 19
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.1e-37 Score=302.07 Aligned_cols=174 Identities=26% Similarity=0.420 Sum_probs=151.2
Q ss_pred EEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-----------------------------------eEE
Q 007337 397 VELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK-----------------------------------ISI 441 (607)
Q Consensus 397 I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK-----------------------------------i~~ 441 (607)
++++||+++| .|+||||+|++||++||+||||||| .+|
T Consensus 4 l~~~dv~~~~-------~l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~~~~G~I~~~g~~i~~~~~~~~~~~~~~ 76 (231)
T d1l7vc_ 4 MQLQDVAEST-------RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAY 76 (231)
T ss_dssp EEEEEECCTT-------TSCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSCCCSSEEEESSSBGGGSCHHHHHHHEEE
T ss_pred EEEECcccCc-------eecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCceEEEECCEECCcCCHHHHHhhcee
Confidence 7899997544 6899999999999999999999999 789
Q ss_pred EccCCC-cccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhc---
Q 007337 442 VSQEPV-LFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMM--- 517 (607)
Q Consensus 442 V~Q~~~-Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~--- 517 (607)
++|+.. .|..|+.+|+.++.......+.+.++++..++.++ ++....+||||||||++||||+++
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~LSgG~~Qrv~iA~al~~~~p 145 (231)
T d1l7vc_ 77 LSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDDK-----------LGRSTNQLSGGEWQRVRLAAVVLQITP 145 (231)
T ss_dssp ECSCCCCCSSCBHHHHHHHHCSCTTCHHHHHHHHHHTTCTTT-----------TTSBGGGCCHHHHHHHHHHHHHHHHCT
T ss_pred eeccccCCccccHHHHhhhccchhhHHHHHHHHHHhcCCHhH-----------hCcChhhcCHHHHHHHHHHHHHHhhCc
Confidence 999876 48889999999886544456667788888776654 344556899999999999999997
Q ss_pred ----CCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCCeEEEEccCchh-hhhcCEEEEEeCCEEeEecChhHHhhc
Q 007337 518 ----NPRILLLDEATSALDAESEYLVQDAMDSL-MKGRTVLVIAHRLST-VQSADTVAVVSDGEIVESGTHEELLSK 588 (607)
Q Consensus 518 ----~~~IllLDE~TSaLD~~te~~i~~~l~~~-~~~~TvI~ItHrl~~-l~~aD~Iivl~~G~Ive~G~~~eL~~~ 588 (607)
+|+|+|||||||+||+.+.+.+.+.|+++ ..++|+|+|||+++. .+.||+|++|++|+|++.|+++|+++.
T Consensus 146 ~~~p~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl~~~~~~~dri~vl~~G~iv~~G~~~ev~~~ 222 (231)
T d1l7vc_ 146 QANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTP 222 (231)
T ss_dssp TTCTTCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHHHHHHCSBCCBEETTEECCCSBHHHHSCH
T ss_pred ccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHCCEEEEEECCEEEEECCHHHHhCC
Confidence 67999999999999999999999999876 468899999999986 567999999999999999999999764
No 20
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=5.4e-33 Score=281.97 Aligned_cols=316 Identities=21% Similarity=0.346 Sum_probs=293.7
Q ss_pred hHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007337 57 GFGRVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTA 136 (607)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (607)
.++++|++.+++++.++.++++.++.+++.+..|++++.++|......+ ...+..+++.++++.++..++.+
T Consensus 3 ~~krl~~~~~~~k~~l~~~~i~~~~~~~~~~~~~~~~~~~id~~~~~~~--------~~~l~~~~~~~~~~~~~~~i~~~ 74 (319)
T d3b60a2 3 TFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTD--------RSVLLWMPLVVIGLMILRGITSY 74 (319)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTT--------HHHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------HHHHHHHHHHHHHHHHHhhhhhh
Confidence 5788999999999999999999999999999999999999997654332 22333445566667778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcccCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007337 137 LRAWLFSSASERVVARLRKNLFSHLINQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLGFMFAT 216 (607)
Q Consensus 137 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~G~i~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 216 (607)
++.++..+.+.++..++|.++++|++++|+++|+++++|++++|+++|++.+.+.+.......+..++.+++.+++++.+
T Consensus 75 ~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (319)
T d3b60a2 75 ISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYY 154 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhccccchhhHHHHhhcccchhhccccccccccccccccccccccccccccchhhhhhhhhhhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 007337 217 SWKLTLLALVVVPAISVAVRKFGRFLRELSHKTQAAAATAASIAEESFGAIRTVRSFAQEKNEISRYSEKVDETLKLGLQ 296 (607)
Q Consensus 217 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 296 (607)
+|.+++++++.+|+..++..+..++..+..++..+..++..+.+.|.++|++++|.|++|+.+.+++.+..++..+...+
T Consensus 155 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 234 (319)
T d3b60a2 155 SWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMK 234 (319)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhhHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHHHHHHhhcCCceeeehhccchhhhhhhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 007337 297 QAKVVGLFFGGLNAASTLSVIVVVIYGANLTITGSMTPGALTSFILYSLTVGSSVSGLSSLYTVAMKAAGASRRVFQLLD 376 (607)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ri~~~l~ 376 (607)
..+..........++..+..++++++|++++.+|.+|+|++++++.+...+..|+..+...+..++++.++.+|+.+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~g~it~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~Ri~elld 314 (319)
T d3b60a2 235 MVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILD 314 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccchhhhhhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 007337 377 RVSS 380 (607)
Q Consensus 377 ~~~~ 380 (607)
.|+|
T Consensus 315 ~~~E 318 (319)
T d3b60a2 315 SEQE 318 (319)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 8775
No 21
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=4.8e-33 Score=283.15 Aligned_cols=322 Identities=27% Similarity=0.365 Sum_probs=291.2
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007337 58 FGRVLALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTAL 137 (607)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (607)
+++++++.++|++.++.+++++++.+++.++.|++++.++|.+......... .........+.+.++++.++..++.++
T Consensus 2 lKrl~~~~k~~k~~~~~~~~~~~~~~~~~~~~p~l~~~~id~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (323)
T d2hyda2 2 IKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTD-EKVHHLTIAIGIALFIFVIVRPPIEFI 80 (323)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHH-HHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999988764322211 111222223334445556677888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhcccCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007337 138 RAWLFSSASERVVARLRKNLFSHLINQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLGFMFATS 217 (607)
Q Consensus 138 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~G~i~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 217 (607)
+.++..+.+.++..++|.++|+|++++|.++|+++++|++++|+++|++.+.+.+...+...+..++.+++.+++++.++
T Consensus 81 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (323)
T d2hyda2 81 RQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhhhcccccccccccccccccccchhhhhhccchhhhhhhcchhhhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999988888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 007337 218 WKLTLLALVVVPAISVAVRKFGRFLRELSHKTQAAAATAASIAEESFGAIRTVRSFAQEKNEISRYSEKVDETLKLGLQQ 297 (607)
Q Consensus 218 ~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 297 (607)
|.++++.++..|+..++...+.++.++..++..+..++..+.+.|.++|+++||.|++|+.+.++|.+..++..+...+.
T Consensus 161 ~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~k~ 240 (323)
T d2hyda2 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (323)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHhcCCchhhhHhhhccchhhhhcccccccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007337 298 AKVVGLFFGGLNAASTLSVIVVVIYGANLTITGSMTPGALTSFILYSLTVGSSVSGLSSLYTVAMKAAGASRRVFQLLDR 377 (607)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ri~~~l~~ 377 (607)
.+..........++..+..++++++|++++.+|.+|+|.++++..+...+..|+..+...+..++++.++++|+.+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~s~g~l~~~~~~~~~l~~~l~~l~~~~~~~~~~~~s~~Ri~elLd~ 320 (323)
T d2hyda2 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhhccccccccchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 007337 378 VSS 380 (607)
Q Consensus 378 ~~~ 380 (607)
++|
T Consensus 321 e~e 323 (323)
T d2hyda2 321 DYD 323 (323)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
No 22
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=1.2e-34 Score=274.45 Aligned_cols=161 Identities=25% Similarity=0.396 Sum_probs=133.2
Q ss_pred cEEEEeEEEECCCCCCCcccccceEEeeCCCEEEEEcCCCCcc-------------------------------eEEEcc
Q 007337 396 EVELDDVWFAYPSRPNHMVLKGITLKLLSGSKIALVGPSGGGK-------------------------------ISIVSQ 444 (607)
Q Consensus 396 ~I~~~~vsf~y~~~~~~~vL~~isl~i~~Ge~vaiVG~sGsGK-------------------------------i~~V~Q 444 (607)
.|+++|++|+|+ .++|+||||+|++||++||+||||||| ++|+||
T Consensus 2 ~lev~~ls~~y~----~~vl~~is~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~~~~~~i~~~~~ 77 (200)
T d1sgwa_ 2 KLEIRDLSVGYD----KPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPE 77 (200)
T ss_dssp EEEEEEEEEESS----SEEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGGGGGEEEECS
T ss_pred eEEEEEEEEEeC----CeEEeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehhHhcCcEEEEee
Confidence 489999999994 269999999999999999999999999 899999
Q ss_pred CCCccc-ccHHHHhhcCC---CCCCCHHHHHHHHHHcCchHHHHhCCccccccccCCCCCCChhHHHHHHHHHHHhcCCC
Q 007337 445 EPVLFN-CSIEENIAYGC---DGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPR 520 (607)
Q Consensus 445 ~~~Lf~-gTIreNI~~g~---~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige~G~~LSGGQkQRialARAll~~~~ 520 (607)
++.++. -|++||+.+.. ..+.+++++.++++..++.+ ++..+ .+||||||||++||||++++|+
T Consensus 78 ~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~----~~LSgG~~qrv~ia~al~~~~~ 145 (200)
T d1sgwa_ 78 EIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLD--------LKKKL----GELSQGTIRRVQLASTLLVNAE 145 (200)
T ss_dssp SCCCCTTSBHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCCC--------TTSBG----GGSCHHHHHHHHHHHHTTSCCS
T ss_pred cccCCCCcCHHHHHHHHHHhcCCccCHHHHHHHHHHcCCcc--------ccccc----CcCCCcHHHHHHHHHHHhcCCC
Confidence 999874 59999986421 12567888888888776533 22233 3699999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 007337 521 ILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSD 573 (607)
Q Consensus 521 IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl~~ 573 (607)
++||||||++||+++++.+.+.|.++.+++++++|+|+- .+..||++.+|++
T Consensus 146 llllDEPt~gLD~~~~~~i~~~l~~~~~~~~~~ii~~~~-~l~~~D~~~~l~~ 197 (200)
T d1sgwa_ 146 IYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSRE-ELSYCDVNENLHK 197 (200)
T ss_dssp EEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESS-CCTTSSEEEEGGG
T ss_pred EEEEcCcccccCHHHHHHHHHHHHHHHhCCCEEEEEEec-hhhhcchhhheee
Confidence 999999999999999999999998877655555555553 3567999998854
No 23
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.73 E-value=1.5e-18 Score=173.05 Aligned_cols=78 Identities=29% Similarity=0.407 Sum_probs=72.0
Q ss_pred CCCChhHHH------HHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhhcCEEEEE
Q 007337 499 VRLSGGQKQ------RVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMK-GRTVLVIAHRLSTVQSADTVAVV 571 (607)
Q Consensus 499 ~~LSGGQkQ------RialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~-~~TvI~ItHrl~~l~~aD~Iivl 571 (607)
..||||||| |+|+||++..+|+|++|||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|+++
T Consensus 200 ~~lSgGe~~~~~la~~la~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~~~~~D~ii~l 279 (292)
T g1f2t.1 200 TFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKDAADHVIRI 279 (292)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGGGGGCSEEEEE
T ss_pred hhcchHHHHHHHHHHHHHHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHHHHhCCEEEEE
Confidence 678999999 89999999999999999999999999999999999998754 47999999999999999999998
Q ss_pred --eCCEE
Q 007337 572 --SDGEI 576 (607)
Q Consensus 572 --~~G~I 576 (607)
++|..
T Consensus 280 ~~~~g~~ 286 (292)
T g1f2t.1 280 SLENGSS 286 (292)
T ss_dssp EEETTEE
T ss_pred EecCCEE
Confidence 67764
No 24
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.29 E-value=1.5e-13 Score=126.01 Aligned_cols=80 Identities=10% Similarity=0.021 Sum_probs=64.7
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEe
Q 007337 500 RLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLM--KGRTVLVIAHRLSTVQSADTVAVVSDGEIV 577 (607)
Q Consensus 500 ~LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~--~~~TvI~ItHrl~~l~~aD~Iivl~~G~Iv 577 (607)
.+|+|++||.++++++.++|+++++|||+...+. ...+.+.+.+.+ .++|+|+++|+.+..+.+|++..+++|+++
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~~--~~~~~~~l~~~l~~~~~~il~~~h~~~~~~~~~~i~~~~~~~i~ 158 (178)
T d1ye8a1 81 EELAIPILERAYREAKKDRRKVIIIDEIGKMELF--SKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLI 158 (178)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEECCCSTTGGG--CHHHHHHHHHHHTCTTSEEEEECCSSCCSHHHHHHHTCTTCEEE
T ss_pred hhhhhhhHHHHHHHHHhcCCCceeecCCCccchh--hHHHHHHHHHHhccCCCEEEEEEccHHHHHhhceEEEEeCCEEE
Confidence 4789999999999999999999999998655432 223334444433 368999999999988999999999999999
Q ss_pred EecC
Q 007337 578 ESGT 581 (607)
Q Consensus 578 e~G~ 581 (607)
+-+.
T Consensus 159 ~v~~ 162 (178)
T d1ye8a1 159 ELTP 162 (178)
T ss_dssp ECCT
T ss_pred EECC
Confidence 8754
No 25
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.18 E-value=1.9e-11 Score=123.51 Aligned_cols=76 Identities=29% Similarity=0.402 Sum_probs=67.4
Q ss_pred CCCChhHHHHHHHHHHHh------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhhcCEEEEE
Q 007337 499 VRLSGGQKQRVAIARALM------MNPRILLLDEATSALDAESEYLVQDAMDSLMK-GRTVLVIAHRLSTVQSADTVAVV 571 (607)
Q Consensus 499 ~~LSGGQkQRialARAll------~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~-~~TvI~ItHrl~~l~~aD~Iivl 571 (607)
..|||||||+++||-.++ .+++|+++|||+++||++..+.+.+.|.++.+ ++++|++||++..+..||.++++
T Consensus 277 ~~lS~Ge~~~~~la~~l~~~~~~~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~~~~~~d~~~~v 356 (369)
T g1ii8.1 277 TFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKDAADHVIRI 356 (369)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGGGGGTSSEEEEE
T ss_pred eccchHHHHHHHHHHHHHHHHhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHHHHHhCCEEEEE
Confidence 358999999999876654 68999999999999999999999999998754 46999999999999999999998
Q ss_pred --eCC
Q 007337 572 --SDG 574 (607)
Q Consensus 572 --~~G 574 (607)
++|
T Consensus 357 ~~~~g 361 (369)
T g1ii8.1 357 SLENG 361 (369)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 566
No 26
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.82 E-value=1.3e-08 Score=100.84 Aligned_cols=75 Identities=27% Similarity=0.348 Sum_probs=66.5
Q ss_pred CCChhHHHHHHHHHHH----hcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEE--EeC
Q 007337 500 RLSGGQKQRVAIARAL----MMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAV--VSD 573 (607)
Q Consensus 500 ~LSGGQkQRialARAl----l~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iiv--l~~ 573 (607)
.+|+|||+.+.++..+ ..+++++++|||-++|+|...+.+.+.|++..++.=+|++||++.++..+|+++. +++
T Consensus 219 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~~~~~~d~~~~v~~~~ 298 (308)
T d1e69a_ 219 LLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTMVN 298 (308)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGGGGCSEEEEEEESS
T ss_pred hhhHHHhhHHHHHhhhhhhhhccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHHHhcccEEEEEEeC
Confidence 5899999998887654 3567999999999999999999999999998888889999999999999999966 667
Q ss_pred C
Q 007337 574 G 574 (607)
Q Consensus 574 G 574 (607)
|
T Consensus 299 g 299 (308)
T d1e69a_ 299 G 299 (308)
T ss_dssp S
T ss_pred C
Confidence 7
No 27
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.77 E-value=6.3e-09 Score=107.87 Aligned_cols=72 Identities=24% Similarity=0.298 Sum_probs=61.5
Q ss_pred CCChhHHHHHHHHHHH----hcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCC-CeEEEEccCchhhhhcCEEEEE
Q 007337 500 RLSGGQKQRVAIARAL----MMNPRILLLDEATSALDAESEYLVQDAMDSLMKG-RTVLVIAHRLSTVQSADTVAVV 571 (607)
Q Consensus 500 ~LSGGQkQRialARAl----l~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~-~TvI~ItHrl~~l~~aD~Iivl 571 (607)
.||||||.+++||=.+ +.++|+++||||+++||+.+...+.+.|.+.... .-+|+|||++.++..||+++.+
T Consensus 332 ~lSgGEk~~~~lal~lal~~~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~~~~~~ad~~~~V 408 (427)
T d1w1wa_ 332 YLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGV 408 (427)
T ss_dssp GSCHHHHHHHHHHHHHHHHTSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHHHHTTCSEEEEE
T ss_pred hhccchHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHhcccEEEE
Confidence 4799999998776432 4678999999999999999999999999877443 4599999999999999998865
No 28
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.44 E-value=1.7e-06 Score=85.97 Aligned_cols=73 Identities=27% Similarity=0.310 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHHHh----cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 007337 499 VRLSGGQKQRVAIARALM----MNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVV 571 (607)
Q Consensus 499 ~~LSGGQkQRialARAll----~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD~Iivl 571 (607)
..||+||++...++-++- +++.++++|||-++|++...+.+.+.+.+..++.=+|++||++.++..+|+++.+
T Consensus 223 ~~ls~~~~~l~~l~~~~~~~~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iitTh~~~~~~~~~~l~~i 299 (329)
T g1xew.1 223 EAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRDVMMANADKIIGV 299 (329)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHSCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEECCCHHHHHHCSEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHhhcccchhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhHhhcCE
Confidence 457999999887765543 7899999999999999999989999999887776788999999999999999887
No 29
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=97.90 E-value=0.011 Score=56.24 Aligned_cols=239 Identities=11% Similarity=0.013 Sum_probs=113.0
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007337 62 LALAKPDAGKLIIATVALLIASVSSILIPKFGGKIIDIVSGDTETPEQKAEALAAVRSTILSIFLIVIVGSVCTALRAWL 141 (607)
Q Consensus 62 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (607)
++.+.++.++....+++.++..++..+.+.+...++..+.+... .... ......+.+..++..++..+-.+.
T Consensus 4 ~krl~~~~~~~k~~l~~~~i~~~~~~~~~~~~~~~~~~~id~~~-------~~~~-~~~l~~~~~~~~~~~~~~~i~~~~ 75 (319)
T d3b60a2 4 FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGF-------GKTD-RSVLLWMPLVVIGLMILRGITSYI 75 (319)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSST-------TSTT-HHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccCC-HHHHHHHHHHHHHHHHHhhhhhhh
Confidence 33344455555666666666666666666666666665543210 0111 223333344455555666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchhhcccCchHHH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007337 142 FSSASERVVARLRKNLFSHLINQEIAFYDVTRTGELL-----SRLSEDTQIIKNAATTNLSEALRNLSTAFIGLGFMFAT 216 (607)
Q Consensus 142 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~G~i~-----~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 216 (607)
......+...++..++-+++.+.-.. .+.+..- +.++...+.+.. +...+...+...+..++.++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~~~~ll~----~~~~~~~~~~~g~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (319)
T d3b60a2 76 SSYCISWVSGKVVMTMRRRLFGHMMG----MPVAFFDKQSTGTLLSRITYDSEQ-VASSSSGALITVVREGASIIGLFIM 150 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT----CCSTHHHHSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccchhhHHHHhhcc----cchhhccccccccccccccccccc-cccccccccchhhhhhhhhhhHHHH
Confidence 77777778788877777777554332 3444333 333333333322 2333334444444444444444444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 007337 217 SWKLTLLALVVVPAISVAVRKFGRFLRELSHKTQAAAATAASIAEE-SFGAIRTVRSFAQEKNEISRYSEKVDETLKLGL 295 (607)
Q Consensus 217 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 295 (607)
.........+++.+..++.........+...+..+...+..+...+ ..+.++-++....-... +.+.+..++..+...
T Consensus 151 ~~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~e-~~~~~~~~~~~~~~~ 229 (319)
T d3b60a2 151 MFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQ-EVETKRFDKVSNKMR 229 (319)
T ss_dssp HHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCH-HHHHHHHHHHHHHHH
T ss_pred HHhhhccchhhhhhHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHHHHHHhhcCCceeeehhcc-chhhhhhhhhhhhhh
Confidence 3333333334444444455555555544444444443333333333 33333434433333322 233333444444444
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007337 296 QQAKVVGLFFGGLNAASTL 314 (607)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~ 314 (607)
+.................+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~ 248 (319)
T d3b60a2 230 LQGMKMVSASSISDPIIQL 248 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccchhh
Confidence 4444444444444444433
No 30
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.32 E-value=0.022 Score=54.16 Aligned_cols=33 Identities=3% Similarity=0.029 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007337 130 VGSVCTALRAWLFSSASERVVARLRKNLFSHLI 162 (607)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 162 (607)
+..++...-.+.......+...+++.++-.++.
T Consensus 69 ~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 101 (323)
T d2hyda2 69 IFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLY 101 (323)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 334444445555555555666666665555554
No 31
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.59 E-value=0.024 Score=52.12 Aligned_cols=63 Identities=11% Similarity=0.080 Sum_probs=37.1
Q ss_pred HHHHHh-cCCCEEEEeccCCCC---CHHHHHHHHHHHHHhc--CCCeEEEEccCch-----------hhhhcCEEEEEeC
Q 007337 511 IARALM-MNPRILLLDEATSAL---DAESEYLVQDAMDSLM--KGRTVLVIAHRLS-----------TVQSADTVAVVSD 573 (607)
Q Consensus 511 lARAll-~~~~IllLDE~TSaL---D~~te~~i~~~l~~~~--~~~TvI~ItHrl~-----------~l~~aD~Iivl~~ 573 (607)
|.+++- .+|++++.|..++.. +..........+.+.+ .+.|+++++|.-. .-..||-|+.|+.
T Consensus 108 i~~~i~~~~~~~vviDs~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ad~vi~l~~ 187 (242)
T d1tf7a2 108 IKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQY 187 (242)
T ss_dssp HHHHHHTTCCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSSSCCCSSCSSCCTTTCSEEEEEEE
T ss_pred HHHHHHhcCCceeeeecchhhhcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeeEeeccccccCCcceeeecceEEEEEE
Confidence 334433 368999999876665 3333333333333322 4788888888531 1235899998853
No 32
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.40 E-value=0.035 Score=52.14 Aligned_cols=25 Identities=32% Similarity=0.332 Sum_probs=20.2
Q ss_pred ccccceEEeeCCCEEEEEcCCCCcc
Q 007337 414 VLKGITLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 414 vL~~isl~i~~Ge~vaiVG~sGsGK 438 (607)
-|+++.-=+.+|+.+.|.|++|+||
T Consensus 24 ~lD~~~~G~~~G~l~vi~G~~G~GK 48 (277)
T d1cr2a_ 24 GINDKTLGARGGEVIMVTSGSGMGK 48 (277)
T ss_dssp THHHHHCSBCTTCEEEEECSTTSSH
T ss_pred hHHHHhcCCCCCeEEEEEeCCCCCH
Confidence 3555443478999999999999999
No 33
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=94.95 E-value=0.011 Score=55.63 Aligned_cols=59 Identities=15% Similarity=0.200 Sum_probs=36.5
Q ss_pred HhcCCCEEEEeccCCCC-----CHHHHHHHHHHHHHhc--CCCeEEEEccCch-------------------hhhhcCEE
Q 007337 515 LMMNPRILLLDEATSAL-----DAESEYLVQDAMDSLM--KGRTVLVIAHRLS-------------------TVQSADTV 568 (607)
Q Consensus 515 ll~~~~IllLDE~TSaL-----D~~te~~i~~~l~~~~--~~~TvI~ItHrl~-------------------~l~~aD~I 568 (607)
-..+++++|+|--++.. |...-..+.+.|.++. .++|+|+|.|--. ....||.+
T Consensus 129 ~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~v~H~~K~~~~~~~~~~~~~~~Gssai~~~a~~v 208 (274)
T d1nlfa_ 129 AAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQ 208 (274)
T ss_dssp HHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEEC--------------------CTGGGCSCE
T ss_pred hccCccEEecCchhhhccccccchhhHHHHHHHHHHHhhcCCCceehhhhccccccccCCcccccccccHHHHHhhccEE
Confidence 35789999999665432 3333345555565443 3789999988321 12358888
Q ss_pred EEEeC
Q 007337 569 AVVSD 573 (607)
Q Consensus 569 ivl~~ 573 (607)
+.|..
T Consensus 209 ~~l~r 213 (274)
T d1nlfa_ 209 SYLSS 213 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88853
No 34
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=94.76 E-value=0.024 Score=51.86 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=32.3
Q ss_pred cCCCEEEEeccCCCCCHH-HHHHHHHHHHHhc-CCCeEEEEccCchhhh
Q 007337 517 MNPRILLLDEATSALDAE-SEYLVQDAMDSLM-KGRTVLVIAHRLSTVQ 563 (607)
Q Consensus 517 ~~~~IllLDE~TSaLD~~-te~~i~~~l~~~~-~~~TvI~ItHrl~~l~ 563 (607)
.+..++|+||..++=|++ ........++.+. .+.+++++||..+...
T Consensus 113 ~~~sLvliDE~~~gT~~~eg~ala~aile~L~~~~~~~i~tTH~~eL~~ 161 (224)
T d1ewqa2 113 TENSLVLLDEVGRGTSSLDGVAIATAVAEALHERRAYTLFATHYFELTA 161 (224)
T ss_dssp CTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEECCCHHHHT
T ss_pred CCCcEEeecccccCcchhhhcchHHHHHHHHhhcCcceEEeeechhhhh
Confidence 456799999999999998 3333333333322 3788999999876544
No 35
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.62 E-value=0.12 Score=47.36 Aligned_cols=45 Identities=16% Similarity=0.147 Sum_probs=30.2
Q ss_pred cCCCEEEEeccCCCCCHH-HHHHHHHHHHHhc--CCCeEEEEccCchh
Q 007337 517 MNPRILLLDEATSALDAE-SEYLVQDAMDSLM--KGRTVLVIAHRLST 561 (607)
Q Consensus 517 ~~~~IllLDE~TSaLD~~-te~~i~~~l~~~~--~~~TvI~ItHrl~~ 561 (607)
.+..++|+||..++=|+. ........++.+. .++.+|+.||....
T Consensus 119 ~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~~~~~~~i~tTH~~~l 166 (234)
T d1wb9a2 119 TEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFEL 166 (234)
T ss_dssp CTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEECSCGGG
T ss_pred ccccEEeecccccCCChhhhhHHHHHhhhhhhccccceEEEecchHHH
Confidence 445699999999999998 4444444454442 24567777776654
No 36
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=92.90 E-value=0.39 Score=42.82 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=32.8
Q ss_pred CCCEEEEeccCCCCCH----HHHHHHHHHHHHh--cCCCeEEEEccCchh---------h-hhcCEEEEEe
Q 007337 518 NPRILLLDEATSALDA----ESEYLVQDAMDSL--MKGRTVLVIAHRLST---------V-QSADTVAVVS 572 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~----~te~~i~~~l~~~--~~~~TvI~ItHrl~~---------l-~~aD~Iivl~ 572 (607)
+|+++++|--++-.+. .........+.+. ..++|+++++|.... . ..+|-|+.++
T Consensus 125 ~~~~viiD~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~ 195 (242)
T d1tf7a1 125 RARRVSIDSVTSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILR 195 (242)
T ss_dssp TCSEEEEECSTTTSTTTCCHHHHHHHHHHHHHHHHHHTCEEEEEEECSSSSSCSSTTSCHHHHCSEEEEEE
T ss_pred ccchhhhhHHHHHHHhccChhHHHHHHHHHHHHHHhcCCceEEeecccccccccccCcceeeeccEEEEEE
Confidence 6899999977665432 2222222222221 137899999886643 2 2478888875
No 37
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=89.83 E-value=0.057 Score=47.22 Aligned_cols=14 Identities=50% Similarity=0.817 Sum_probs=13.6
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
|+.+.|+|||||||
T Consensus 2 G~iivl~GpsG~GK 15 (182)
T d1znwa1 2 GRVVVLSGPSAVGK 15 (182)
T ss_dssp CCEEEEECSTTSSH
T ss_pred CeEEEEECCCCCCH
Confidence 89999999999999
No 38
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=89.76 E-value=0.25 Score=44.14 Aligned_cols=15 Identities=47% Similarity=0.534 Sum_probs=11.1
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+...+++|||+|+||
T Consensus 11 ~p~vi~lvGptGvGK 25 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGK 25 (211)
T ss_dssp SSEEEEEECSCCC--
T ss_pred CCEEEEEECCCCCCH
Confidence 446799999999999
No 39
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=89.74 E-value=0.055 Score=45.39 Aligned_cols=13 Identities=38% Similarity=0.598 Sum_probs=11.7
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+.|.|+|++||||
T Consensus 3 klIii~G~pGsGK 15 (152)
T d1ly1a_ 3 KIILTIGCPGSGK 15 (152)
T ss_dssp EEEEEECCTTSSH
T ss_pred EEEEEECCCCCCH
Confidence 4688999999999
No 40
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.47 E-value=0.018 Score=50.09 Aligned_cols=67 Identities=9% Similarity=0.076 Sum_probs=39.7
Q ss_pred ccccccccCCCCCCChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEcc
Q 007337 488 EKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAH 557 (607)
Q Consensus 488 ~G~~T~ige~G~~LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItH 557 (607)
.+.+..+.+.....+......+.+.|.++.+++++++...+..-+.. ..+.+.+.+. ++.+++.+|.
T Consensus 104 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~lt~ 170 (189)
T d2i3ba1 104 PGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGTIILGTIPVPKGKP--LALVEEIRNR-KDVKVFNVTK 170 (189)
T ss_dssp SCCCCEEECCCSTTTTTCSHHHHHHHHHHHCSSCCEEEECCCCCSSC--CTTHHHHHTT-CCSEEEECCS
T ss_pred cCCCeeEeeccccchhhhHHHHHHHHHHhccCceEEEeccccCCcch--HHHHHHHhCC-CCCeEEEECh
Confidence 35666666666667777788888888888887776654433322222 2223344332 4566666553
No 41
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.10 E-value=0.25 Score=45.90 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccCCCCCHH---------HHHHHHHHHHHhc----C--CCeEEEEccCchhhh------
Q 007337 505 QKQRVAIARALMMNPRILLLDEATSALDAE---------SEYLVQDAMDSLM----K--GRTVLVIAHRLSTVQ------ 563 (607)
Q Consensus 505 QkQRialARAll~~~~IllLDE~TSaLD~~---------te~~i~~~l~~~~----~--~~TvI~ItHrl~~l~------ 563 (607)
++-|-.+.+|-...|.|+++||.-+-.... ...++...+...+ . +--+|..|++++.++
T Consensus 87 ~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~ 166 (265)
T d1r7ra3 87 ANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRP 166 (265)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSS
T ss_pred HHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCC
Confidence 444555667777889999999987655332 1122333333322 1 235677789998763
Q ss_pred -hcCEEEEE
Q 007337 564 -SADTVAVV 571 (607)
Q Consensus 564 -~aD~Iivl 571 (607)
+.|+++-+
T Consensus 167 gRf~~~i~~ 175 (265)
T d1r7ra3 167 GRLDQLIYI 175 (265)
T ss_dssp TTSEEEEEC
T ss_pred CCccEEEEe
Confidence 35555554
No 42
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=88.76 E-value=0.74 Score=42.26 Aligned_cols=17 Identities=35% Similarity=0.532 Sum_probs=13.5
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++..-+.+.||+||||
T Consensus 42 ~~~~~~iLL~GppGtGK 58 (256)
T d1lv7a_ 42 GKIPKGVLMVGPPGTGK 58 (256)
T ss_dssp -CCCCEEEEECCTTSCH
T ss_pred CCCCCeEEeeCCCCCCc
Confidence 44456788999999999
No 43
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=88.55 E-value=0.67 Score=41.07 Aligned_cols=15 Identities=40% Similarity=0.683 Sum_probs=13.9
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
++..+++|||+||||
T Consensus 5 ~~~vi~lvGptGvGK 19 (207)
T d1okkd2 5 KGRVVLVVGVNGVGK 19 (207)
T ss_dssp SSSEEEEECSTTSSH
T ss_pred CCEEEEEECCCCCCH
Confidence 578999999999999
No 44
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=88.37 E-value=0.14 Score=48.78 Aligned_cols=50 Identities=12% Similarity=0.179 Sum_probs=34.5
Q ss_pred EEEEEcCCCCcc-------------------eEEEccCCCcccccHHHHh----hcCCCCCCCHHHHHHHHHH
Q 007337 427 KIALVGPSGGGK-------------------ISIVSQEPVLFNCSIEENI----AYGCDGKASSADIENAAKM 476 (607)
Q Consensus 427 ~vaiVG~sGsGK-------------------i~~V~Q~~~Lf~gTIreNI----~~g~~~~~~~~~i~~al~~ 476 (607)
.|||.|+||||| +..|++|.+..+...++.= .+|.|..++-+.+.+.+..
T Consensus 82 iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~~~~~l~~~~~~~~~g~Pes~D~~~L~~~L~~ 154 (308)
T d1sq5a_ 82 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSD 154 (308)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCCHHHHHHHTCTTCTTSGGGBCHHHHHHHHHH
T ss_pred EEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeECCchHHHHhcCCccCCchHhhhHHHHHHHHHH
Confidence 689999999999 7889999999876665432 2343434555555554443
No 45
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=88.11 E-value=0.8 Score=41.72 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=32.0
Q ss_pred HHHHHhcCCCEEEEeccCC-----CCCHHHHHHHHHHHHHhcCC------Ce-EEEEccCchhhh------hcCEEEEE
Q 007337 511 IARALMMNPRILLLDEATS-----ALDAESEYLVQDAMDSLMKG------RT-VLVIAHRLSTVQ------SADTVAVV 571 (607)
Q Consensus 511 lARAll~~~~IllLDE~TS-----aLD~~te~~i~~~l~~~~~~------~T-vI~ItHrl~~l~------~aD~Iivl 571 (607)
+.+|--..|.|+++||.=+ ..+++....+.+.+...+.+ +. +|..|.+.+.+. .+|+.+.+
T Consensus 93 f~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~ 171 (246)
T d1d2na_ 93 FDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHV 171 (246)
T ss_dssp HHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCTTTSSEEEEC
T ss_pred hhhhhhcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhcCccceEEec
Confidence 4455556778999999622 22233233444555444322 22 334567765443 45666554
No 46
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.98 E-value=0.81 Score=39.12 Aligned_cols=83 Identities=12% Similarity=0.162 Sum_probs=43.7
Q ss_pred eeCCCEEEEEcCCCCcceEEE----ccCCCcc-cccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccC
Q 007337 422 LLSGSKIALVGPSGGGKISIV----SQEPVLF-NCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGE 496 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGKi~~V----~Q~~~Lf-~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige 496 (607)
-++-+.|.++|++||||-++. .+..+.+ + .|.+ .+.+++.+.++. .|..|.+..+.
T Consensus 11 ~~~p~liil~G~pGsGKST~a~~l~~~~~~~~i~---~D~~-------~~~~~~~~~~~~--------~l~~g~~vIiD- 71 (172)
T d1yj5a2 11 SPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVN---RDTL-------GSWQRCVSSCQA--------ALRQGKRVVID- 71 (172)
T ss_dssp CSSCCEEEEECCTTSSHHHHHHHHTGGGTCEEEE---HHHH-------CSHHHHHHHHHH--------HHHTTCCEEEE-
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHhcCCEEEc---hHHH-------HHHHHHHHHHHH--------HHHCCCCceee-
Confidence 356689999999999992211 1111110 0 0111 112233333322 33457666654
Q ss_pred CCCCCChhHHHH-HHHHHHHhcCCCEEEE
Q 007337 497 RGVRLSGGQKQR-VAIARALMMNPRILLL 524 (607)
Q Consensus 497 ~G~~LSGGQkQR-ialARAll~~~~IllL 524 (607)
..+++-.||++ +.+||..=-+..++.|
T Consensus 72 -~t~~~~~~R~~~~~~a~~~~~~~~~v~l 99 (172)
T d1yj5a2 72 -NTNPDVPSRARYIQCAKDAGVPCRCFNF 99 (172)
T ss_dssp -SCCCSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred -CcCCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 56788888877 6777765333344444
No 47
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=87.61 E-value=0.41 Score=42.75 Aligned_cols=70 Identities=16% Similarity=0.253 Sum_probs=41.6
Q ss_pred HhcCCCEEEEeccCCCC-CHHHHHHHHHHHHHhcC-CCeEEEEccCch-hhh--hcCEEEEEeCCEEeEecChhH
Q 007337 515 LMMNPRILLLDEATSAL-DAESEYLVQDAMDSLMK-GRTVLVIAHRLS-TVQ--SADTVAVVSDGEIVESGTHEE 584 (607)
Q Consensus 515 ll~~~~IllLDE~TSaL-D~~te~~i~~~l~~~~~-~~TvI~ItHrl~-~l~--~aD~Iivl~~G~Ive~G~~~e 584 (607)
.+++.+++++||.-.-- ++.++..+.+.+..... ++.+|+.+.+.. .+. ..|-.=.+..|-+++--+.+|
T Consensus 94 ~~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~p~d~ 168 (213)
T d1l8qa2 94 MYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNK 168 (213)
T ss_dssp HHHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECCCCHH
T ss_pred HHhhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEECCCcH
Confidence 46789999999986543 56688888888877654 555555544432 121 112222345677766544444
No 48
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=87.53 E-value=0.1 Score=46.65 Aligned_cols=15 Identities=40% Similarity=0.727 Sum_probs=14.3
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+|..+.|+|||||||
T Consensus 1 ~G~livi~GPSG~GK 15 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGK 15 (205)
T ss_dssp CCCEEEEECCTTSCH
T ss_pred CCeEEEEECCCCCCH
Confidence 589999999999999
No 49
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.01 E-value=0.61 Score=42.22 Aligned_cols=43 Identities=16% Similarity=0.375 Sum_probs=32.3
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLST 561 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~ 561 (607)
+..++++||+-. |..+....+.+.+.....+...|++|++++-
T Consensus 131 ~~~iiiide~d~-l~~~~~~~l~~~~e~~~~~~~~Il~tn~~~~ 173 (252)
T d1sxje2 131 RYKCVIINEANS-LTKDAQAALRRTMEKYSKNIRLIMVCDSMSP 173 (252)
T ss_dssp CCEEEEEECTTS-SCHHHHHHHHHHHHHSTTTEEEEEEESCSCS
T ss_pred CceEEEeccccc-cccccchhhhcccccccccccceeeeccccc
Confidence 456999999965 7777777777777765555567899998863
No 50
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=86.94 E-value=0.23 Score=42.05 Aligned_cols=65 Identities=18% Similarity=0.189 Sum_probs=47.7
Q ss_pred HHHHHHHhc--CCCEEEEeccCCCCCHH--HHHHHHHHHHHhcCCCeEEEEccCc--hhhhhcCEEEEEeC
Q 007337 509 VAIARALMM--NPRILLLDEATSALDAE--SEYLVQDAMDSLMKGRTVLVIAHRL--STVQSADTVAVVSD 573 (607)
Q Consensus 509 ialARAll~--~~~IllLDE~TSaLD~~--te~~i~~~l~~~~~~~TvI~ItHrl--~~l~~aD~Iivl~~ 573 (607)
...||..+. +.|++||||...|++-. ++..|.+.|.+...+.-+|+.-+.. +.++.||.|--|..
T Consensus 83 ~~~a~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~ADlVTEm~~ 153 (157)
T d1g5ta_ 83 WQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRP 153 (157)
T ss_dssp HHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHCSEEEECCC
T ss_pred HHHHHHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhcceeeeeee
Confidence 444565554 47999999999999887 9999999998754444555554544 36789999987753
No 51
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=85.41 E-value=2.3 Score=37.38 Aligned_cols=14 Identities=43% Similarity=0.534 Sum_probs=12.4
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
...+++|||+|+||
T Consensus 10 ~~vi~lvGp~GvGK 23 (207)
T d1ls1a2 10 RNLWFLVGLQGSGK 23 (207)
T ss_dssp SEEEEEECCTTTTH
T ss_pred CcEEEEECCCCCCH
Confidence 45789999999999
No 52
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=85.32 E-value=0.14 Score=48.04 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=16.8
Q ss_pred EEEEEcCCCCcc-----------------eEEEccCCCc
Q 007337 427 KIALVGPSGGGK-----------------ISIVSQEPVL 448 (607)
Q Consensus 427 ~vaiVG~sGsGK-----------------i~~V~Q~~~L 448 (607)
.|||.|+||||| .++++||.+-
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCCC
Confidence 799999999999 5799999874
No 53
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=84.29 E-value=0.71 Score=42.15 Aligned_cols=13 Identities=54% Similarity=0.923 Sum_probs=11.4
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
.-+.+.||+||||
T Consensus 43 ~giLl~GppGtGK 55 (247)
T d1ixza_ 43 KGVLLVGPPGVGK 55 (247)
T ss_dssp SEEEEECCTTSSH
T ss_pred ceEEEecCCCCCh
Confidence 3478999999999
No 54
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=82.94 E-value=0.18 Score=42.95 Aligned_cols=15 Identities=40% Similarity=0.736 Sum_probs=14.2
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
.|+.|.|+|++||||
T Consensus 3 ~g~iI~l~G~~GsGK 17 (176)
T d1zp6a1 3 GGNILLLSGHPGSGK 17 (176)
T ss_dssp TTEEEEEEECTTSCH
T ss_pred CCeEEEEECCCCCCH
Confidence 588999999999999
No 55
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=82.77 E-value=0.14 Score=46.75 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=16.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+.|.|++||||
T Consensus 33 lp~G~~~li~G~pGsGK 49 (254)
T d1pzna2 33 IETQAITEVFGEFGSGK 49 (254)
T ss_dssp EESSEEEEEEESTTSSH
T ss_pred ccCCEEEEEEcCCCCCH
Confidence 89999999999999999
No 56
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=82.35 E-value=0.25 Score=41.90 Aligned_cols=16 Identities=38% Similarity=0.655 Sum_probs=15.0
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
|+|-.|+|.|++||||
T Consensus 3 pk~~~I~i~G~~GsGK 18 (174)
T d1y63a_ 3 PKGINILITGTPGTGK 18 (174)
T ss_dssp CSSCEEEEECSTTSSH
T ss_pred CCCCEEEEEeCCCCCH
Confidence 5789999999999999
No 57
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=82.14 E-value=0.21 Score=42.56 Aligned_cols=16 Identities=38% Similarity=0.443 Sum_probs=15.0
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
++|.+|.|+|.+||||
T Consensus 4 ~~g~~I~l~G~~GsGK 19 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGK 19 (183)
T ss_dssp TCCEEEEEECSTTSSH
T ss_pred CCCeEEEEECCCCCCH
Confidence 4789999999999999
No 58
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=81.70 E-value=0.27 Score=46.67 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=19.4
Q ss_pred cccceEEeeCCCEEEEEcCCCCcc
Q 007337 415 LKGITLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 415 L~~isl~i~~Ge~vaiVG~sGsGK 438 (607)
++|+++++.+| .+.|||++||||
T Consensus 14 ~~~~~i~~~~~-~~vi~G~NgsGK 36 (369)
T g1ii8.1 14 HSDTVVEFKEG-INLIIGQNGSGK 36 (369)
T ss_dssp CSSEEEECCSE-EEEEECCTTSSH
T ss_pred CcCeEEEcCCC-eEEEECCCCCCH
Confidence 46778888776 777999999999
No 59
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.51 E-value=0.3 Score=42.80 Aligned_cols=17 Identities=29% Similarity=0.423 Sum_probs=16.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+.|.|++||||
T Consensus 20 i~~G~v~~i~G~~GsGK 36 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGK 36 (242)
T ss_dssp EETTSEEEEECCTTSSH
T ss_pred CcCCEEEEEEeCCCCCH
Confidence 88999999999999999
No 60
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=81.11 E-value=0.3 Score=42.52 Aligned_cols=16 Identities=44% Similarity=0.889 Sum_probs=15.1
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
|+|-++.|+||+||||
T Consensus 1 p~~~riil~G~pGSGK 16 (190)
T d1ak2a1 1 PKGVRAVLLGPPGAGK 16 (190)
T ss_dssp CCCCEEEEECCTTSSH
T ss_pred CCccEEEEECCCCCCH
Confidence 6889999999999999
No 61
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.46 E-value=0.37 Score=42.70 Aligned_cols=24 Identities=29% Similarity=0.432 Sum_probs=19.7
Q ss_pred EEEEEcCCCCcc----------------------eEEEccCCCccc
Q 007337 427 KIALVGPSGGGK----------------------ISIVSQEPVLFN 450 (607)
Q Consensus 427 ~vaiVG~sGsGK----------------------i~~V~Q~~~Lf~ 450 (607)
.|||.|++|||| +.++++|.+...
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~~~~~~~~~~~vi~~D~yy~~ 49 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRV 49 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGGGBCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchhccccCCCceEEEeccccccc
Confidence 589999999999 567899887443
No 62
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=79.07 E-value=1.4 Score=36.51 Aligned_cols=65 Identities=9% Similarity=0.038 Sum_probs=39.9
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHH-HHHHHHHHHHHhcCCCeEEEEccCchhhhhcC
Q 007337 502 SGGQKQRVAIARALMMNPRILLLDEATSALDAE-SEYLVQDAMDSLMKGRTVLVIAHRLSTVQSAD 566 (607)
Q Consensus 502 SGGQkQRialARAll~~~~IllLDE~TSaLD~~-te~~i~~~l~~~~~~~TvI~ItHrl~~l~~aD 566 (607)
...+...+..+...++++++++++=.-+.-+.. ....+.+.+.....++.+|+|....+......
T Consensus 64 ~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~iilv~NK~Dl~~~~~ 129 (161)
T d2gj8a1 64 DEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETL 129 (161)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEEEEETTTCCCCSHHHHCHHHHHHSCTTCCEEEEEECHHHHCCCC
T ss_pred ccchhHHHHHHHHHHHhccccceeeccccccchhhhhhhhhhhhhcccccceeeccchhhhhhhHH
Confidence 455677777788889999987753322222222 22233445555555788889988887665443
No 63
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.51 E-value=0.39 Score=41.53 Aligned_cols=13 Identities=31% Similarity=0.723 Sum_probs=12.1
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+.+.|+|||||||
T Consensus 4 k~ivl~Gpsg~GK 16 (178)
T d1kgda_ 4 KTLVLLGAHGVGR 16 (178)
T ss_dssp CEEEEECCTTSSH
T ss_pred CcEEEECCCCCCH
Confidence 5799999999999
No 64
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.86 E-value=0.35 Score=42.07 Aligned_cols=11 Identities=64% Similarity=1.138 Sum_probs=10.6
Q ss_pred EEEEcCCCCcc
Q 007337 428 IALVGPSGGGK 438 (607)
Q Consensus 428 vaiVG~sGsGK 438 (607)
|.|+|||||||
T Consensus 4 Ivl~GpsG~GK 14 (186)
T d1gkya_ 4 IVISGPSGTGK 14 (186)
T ss_dssp EEEECCTTSSH
T ss_pred EEEECCCCCCH
Confidence 78999999999
No 65
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=77.85 E-value=0.46 Score=42.43 Aligned_cols=16 Identities=38% Similarity=0.439 Sum_probs=13.4
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
++...+++|||+|+||
T Consensus 9 ~~p~vi~lvGptGvGK 24 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGK 24 (213)
T ss_dssp SSCEEEEEECCTTSSH
T ss_pred CCCEEEEEECCCCCCH
Confidence 3445789999999999
No 66
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=77.52 E-value=0.59 Score=39.19 Aligned_cols=12 Identities=42% Similarity=0.506 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.++|+|++||||
T Consensus 4 vi~itG~~GSGK 15 (170)
T d1np6a_ 4 LLAFAAWSGTGK 15 (170)
T ss_dssp EEEEECCTTSCH
T ss_pred EEEEEcCCCCCH
Confidence 589999999999
No 67
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=75.92 E-value=0.57 Score=41.65 Aligned_cols=14 Identities=43% Similarity=0.517 Sum_probs=12.5
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
-..+++|||+|+||
T Consensus 9 p~vi~lvGptGvGK 22 (211)
T d2qy9a2 9 PFVILMVGVNGVGK 22 (211)
T ss_dssp TEEEEEECCTTSCH
T ss_pred CEEEEEECCCCCCH
Confidence 35799999999999
No 68
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=75.91 E-value=0.68 Score=45.62 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=30.9
Q ss_pred HHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 007337 508 RVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLST 561 (607)
Q Consensus 508 RialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~ 561 (607)
-=+|..+|=+||||++..|.. |++|.....++- ..|+.|+.--|=-+.
T Consensus 217 ~~~l~~~lR~dPDvi~igEiR---d~~ta~~a~~aa---~tGhlV~tTlHa~~a 264 (401)
T d1p9ra_ 217 ARGLRAILRQDPDVVMVGEIR---DLETAQIAVQAS---LTGHLVMSTLHTNTA 264 (401)
T ss_dssp HHHHHHHGGGCCSEEEESCCC---SHHHHHHHHHHH---HTTCEEEEEECCSSS
T ss_pred HHHHHHHHhhcCCEEEecCcC---ChHHHHHHHHHH---hcCCeEEEEeccCch
Confidence 345666777899999999986 666555544433 236666665554443
No 69
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=75.61 E-value=0.43 Score=40.24 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=14.4
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
+.+..+.|+|++||||
T Consensus 4 ~~~~iivl~G~~GsGK 19 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGK 19 (171)
T ss_dssp TTSEEEEEECSTTSCH
T ss_pred CCCeEEEEECCCCCCH
Confidence 4678899999999999
No 70
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.14 E-value=0.46 Score=41.46 Aligned_cols=11 Identities=64% Similarity=1.196 Sum_probs=10.5
Q ss_pred EEEEcCCCCcc
Q 007337 428 IALVGPSGGGK 438 (607)
Q Consensus 428 vaiVG~sGsGK 438 (607)
|.|+|||||||
T Consensus 3 Ivl~GPsGsGK 13 (190)
T d1lvga_ 3 VVLSGPSGAGK 13 (190)
T ss_dssp EEEECCTTSSH
T ss_pred EEEECCCCCCH
Confidence 78999999999
No 71
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=74.15 E-value=0.88 Score=38.28 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=18.0
Q ss_pred CEEEEEcCCCCcc-----------------eEEEccCCC
Q 007337 426 SKIALVGPSGGGK-----------------ISIVSQEPV 447 (607)
Q Consensus 426 e~vaiVG~sGsGK-----------------i~~V~Q~~~ 447 (607)
+.++|+|.+|||| ++++-.+++
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~d~~ 40 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGH 40 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC-
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEeccC
Confidence 4689999999999 888877765
No 72
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=74.13 E-value=0.5 Score=40.76 Aligned_cols=12 Identities=33% Similarity=0.479 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|||.|++||||
T Consensus 24 iIgI~G~~GSGK 35 (198)
T d1rz3a_ 24 VLGIDGLSRSGK 35 (198)
T ss_dssp EEEEEECTTSSH
T ss_pred EEEEECCCCCCH
Confidence 589999999999
No 73
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.72 E-value=0.65 Score=41.54 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=16.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+-|.|++||||
T Consensus 31 i~~G~~~li~G~pGsGK 47 (251)
T d1szpa2 31 VETGSITELFGEFRTGK 47 (251)
T ss_dssp EESSSEEEEEESTTSSH
T ss_pred CcCCeEEEEEcCCCCCH
Confidence 89999999999999999
No 74
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.42 E-value=1.3 Score=40.49 Aligned_cols=61 Identities=18% Similarity=0.260 Sum_probs=34.8
Q ss_pred HHHHhcCCCEEEEeccCCCCCHHH------HHHHHHHH----HHhcCC--CeEEEEccCchhhh-------hcCEEEEEe
Q 007337 512 ARALMMNPRILLLDEATSALDAES------EYLVQDAM----DSLMKG--RTVLVIAHRLSTVQ-------SADTVAVVS 572 (607)
Q Consensus 512 ARAll~~~~IllLDE~TSaLD~~t------e~~i~~~l----~~~~~~--~TvI~ItHrl~~l~-------~aD~Iivl~ 572 (607)
..|-...|.|+++||.=+=..... ...+...+ .....+ ..+|..|+++..+. +.|+++.+.
T Consensus 91 ~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~ 170 (258)
T d1e32a2 91 EEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 170 (258)
T ss_dssp HHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGGGTSTTSSCEEEECC
T ss_pred HHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeCCCccccchhhhhcccccceeECC
Confidence 344456899999999877654432 12222222 222221 24566788886542 478887763
No 75
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=72.65 E-value=0.72 Score=38.77 Aligned_cols=14 Identities=43% Similarity=0.482 Sum_probs=12.8
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
.+.|.|.|++||||
T Consensus 3 ~kiI~l~G~~GsGK 16 (178)
T d1qhxa_ 3 TRMIILNGGSSAGK 16 (178)
T ss_dssp CCEEEEECCTTSSH
T ss_pred CeEEEEECCCCCCH
Confidence 46899999999999
No 76
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=72.30 E-value=0.58 Score=40.63 Aligned_cols=15 Identities=27% Similarity=0.541 Sum_probs=13.0
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+...|.|+||+||||
T Consensus 5 kp~iI~i~G~pGSGK 19 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGK 19 (194)
T ss_dssp CCEEEEEEESTTSSH
T ss_pred CCcEEEEECCCCCCH
Confidence 346899999999999
No 77
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.27 E-value=0.65 Score=41.85 Aligned_cols=17 Identities=24% Similarity=0.139 Sum_probs=16.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+.|.|++||||
T Consensus 34 ip~G~~~~i~G~~GsGK 50 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGK 50 (258)
T ss_dssp BCSSEEEEEECCTTCTH
T ss_pred CcCCEEEEEECCCCCCH
Confidence 89999999999999999
No 78
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=70.97 E-value=0.63 Score=39.07 Aligned_cols=12 Identities=50% Similarity=0.772 Sum_probs=11.1
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|+|++||||
T Consensus 6 ~I~i~G~pGsGK 17 (173)
T d1rkba_ 6 NILLTGTPGVGK 17 (173)
T ss_dssp CEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 578999999999
No 79
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=70.10 E-value=0.54 Score=40.97 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=15.3
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
++++..|.|.||+||||
T Consensus 5 ~~~~~iI~l~G~pGSGK 21 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGK 21 (194)
T ss_dssp HHTSCEEEEEECTTSSH
T ss_pred ccCCcEEEEECCCCCCH
Confidence 46788999999999999
No 80
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.77 E-value=0.48 Score=40.91 Aligned_cols=15 Identities=47% Similarity=0.744 Sum_probs=14.1
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+|..|.++|++||||
T Consensus 18 ~g~vI~L~G~pGSGK 32 (195)
T d1x6va3 18 RGCTVWLTGLSGAGK 32 (195)
T ss_dssp CCEEEEEESSCHHHH
T ss_pred CCeEEEEECCCCCCH
Confidence 678999999999999
No 81
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.68 E-value=2.9 Score=35.68 Aligned_cols=12 Identities=33% Similarity=0.695 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|+||+||||
T Consensus 3 iI~i~GppGSGK 14 (194)
T d1teva_ 3 VVFVLGGPGAGK 14 (194)
T ss_dssp EEEEECCTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 82
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=69.09 E-value=0.92 Score=38.41 Aligned_cols=14 Identities=21% Similarity=0.454 Sum_probs=12.7
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
.+.|+|.|++||||
T Consensus 1 ~kiI~i~G~~GsGK 14 (190)
T d1khta_ 1 NKVVVVTGVPGVGS 14 (190)
T ss_dssp CCEEEEECCTTSCH
T ss_pred CCEEEEECCCCCCH
Confidence 36899999999999
No 83
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=68.81 E-value=0.84 Score=40.75 Aligned_cols=17 Identities=41% Similarity=0.456 Sum_probs=16.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+-|.|++|+||
T Consensus 31 l~~G~l~~i~G~~G~GK 47 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGK 47 (258)
T ss_dssp EETTEEEEEEESTTSSH
T ss_pred ccCCeEEEEEeCCCCCH
Confidence 89999999999999999
No 84
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=68.66 E-value=0.69 Score=39.15 Aligned_cols=13 Identities=31% Similarity=0.670 Sum_probs=12.2
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
++|+|+|++||||
T Consensus 8 K~I~i~G~~GsGK 20 (192)
T d1lw7a2 8 KTVAILGGESSGK 20 (192)
T ss_dssp EEEEEECCTTSHH
T ss_pred eEEEEECCCCCCH
Confidence 5799999999999
No 85
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=67.50 E-value=1.1 Score=40.23 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=18.1
Q ss_pred CCCEEEEEcCCCCcc---eEEEccCCCcccccHHHHhhcC
Q 007337 424 SGSKIALVGPSGGGK---ISIVSQEPVLFNCSIEENIAYG 460 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK---i~~V~Q~~~Lf~gTIreNI~~g 460 (607)
+|++++++|+||+|| |-.+..+..+-.+.|++..--|
T Consensus 94 ~~kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs~~~~rG 133 (225)
T d1u0la2 94 KGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRG 133 (225)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHSTTCCCC-----------
T ss_pred cCCeEEEECCCCCCHHHHHHhhcchhhhhccCcccccCCC
Confidence 699999999999999 2222233334444444444444
No 86
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=67.27 E-value=0.86 Score=38.06 Aligned_cols=13 Identities=38% Similarity=0.710 Sum_probs=11.8
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+.+.|+|++||||
T Consensus 3 klI~i~G~~GsGK 15 (176)
T d2bdta1 3 KLYIITGPAGVGK 15 (176)
T ss_dssp EEEEEECSTTSSH
T ss_pred eEEEEECCCCCCH
Confidence 4689999999999
No 87
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=67.25 E-value=0.88 Score=37.50 Aligned_cols=13 Identities=62% Similarity=1.009 Sum_probs=11.5
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+.|.|+|++||||
T Consensus 3 k~I~l~G~~GsGK 15 (169)
T d1kaga_ 3 RNIFLVGPMGAGK 15 (169)
T ss_dssp CCEEEECCTTSCH
T ss_pred CeEEEECCCCCCH
Confidence 3588999999999
No 88
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=67.00 E-value=0.91 Score=36.39 Aligned_cols=17 Identities=35% Similarity=0.372 Sum_probs=15.7
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+.|+.|+||||
T Consensus 4 l~~~~~~il~~~tGsGK 20 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGK 20 (140)
T ss_dssp TSTTCEEEECCCTTSST
T ss_pred HHcCCcEEEEcCCCCCh
Confidence 46899999999999999
No 89
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=65.57 E-value=1 Score=44.95 Aligned_cols=13 Identities=46% Similarity=0.984 Sum_probs=11.3
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+=|.++|||||||
T Consensus 50 sNILliGPTGvGK 62 (443)
T d1g41a_ 50 KNILMIGPTGVGK 62 (443)
T ss_dssp CCEEEECCTTSSH
T ss_pred ccEEEECCCCCCH
Confidence 3577999999999
No 90
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=64.58 E-value=7.6 Score=36.39 Aligned_cols=45 Identities=24% Similarity=0.324 Sum_probs=26.6
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCe-EEEEccCchhh
Q 007337 511 IARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRT-VLVIAHRLSTV 562 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~T-vI~ItHrl~~l 562 (607)
+--||-.+||.++++|.-+ +++... .+++. .+.- ++...|=-+..
T Consensus 228 l~~~lR~~pd~iivgEiR~---~ea~~~-l~a~~---tGh~g~~tT~Ha~s~~ 273 (323)
T d1g6oa_ 228 LKSCLRMRPDRIILGELRS---SEAYDF-YNVLC---SGHKGTLTTLHAGSSE 273 (323)
T ss_dssp HHHHTTSCCSEEEESCCCS---THHHHH-HHHHH---TTCSCEEEEECCSSHH
T ss_pred HHHHhccCCCcccCCccCc---hhHHHH-HHHHH---hcCCcEEEEECCCCHH
Confidence 3344556899999999974 454433 34443 3443 56666655433
No 91
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.18 E-value=1.4 Score=42.90 Aligned_cols=19 Identities=26% Similarity=0.611 Sum_probs=15.4
Q ss_pred EEeeCCCEEEEEcCCCCcc
Q 007337 420 LKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 420 l~i~~Ge~vaiVG~sGsGK 438 (607)
+++..+...+|+|++||||
T Consensus 20 i~f~~~~l~~i~G~NGsGK 38 (427)
T d1w1wa_ 20 VGFGESNFTSIIGPNGSGK 38 (427)
T ss_dssp EECTTCSEEEEECSTTSSH
T ss_pred EeCCCCCEEEEECCCCCCH
Confidence 3345566999999999999
No 92
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=63.80 E-value=4.3 Score=37.46 Aligned_cols=50 Identities=22% Similarity=0.359 Sum_probs=31.9
Q ss_pred EEEEEcCCCCcc--------------------eEEEccCCCccccc----HHHHh----h---cCCCCCCCHHHHHHHHH
Q 007337 427 KIALVGPSGGGK--------------------ISIVSQEPVLFNCS----IEENI----A---YGCDGKASSADIENAAK 475 (607)
Q Consensus 427 ~vaiVG~sGsGK--------------------i~~V~Q~~~Lf~gT----IreNI----~---~g~~~~~~~~~i~~al~ 475 (607)
.|||.|++|||| +.+++.|.+-.+-. +.+.+ + -|.|...+-+-..+.++
T Consensus 29 iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~~~l~ 108 (286)
T d1odfa_ 29 FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEVLN 108 (286)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhHHHHHHHHH
Confidence 789999999999 67889998866533 33322 1 24454455555555554
Q ss_pred H
Q 007337 476 M 476 (607)
Q Consensus 476 ~ 476 (607)
.
T Consensus 109 ~ 109 (286)
T d1odfa_ 109 T 109 (286)
T ss_dssp H
T ss_pred H
Confidence 4
No 93
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=62.84 E-value=0.14 Score=44.72 Aligned_cols=23 Identities=30% Similarity=0.316 Sum_probs=18.2
Q ss_pred cccceEEeeCCCEEEEEcCCCCcc
Q 007337 415 LKGITLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 415 L~~isl~i~~Ge~vaiVG~sGsGK 438 (607)
+++.++++.+| .+.|+|++||||
T Consensus 15 ~~~~~i~f~~~-~tvi~G~NGsGK 37 (222)
T d1qhla_ 15 FFARTFDLDEL-VTTLSGGNGAGK 37 (222)
T ss_dssp EEEEEECHHHH-HHHHHSCCSHHH
T ss_pred EeeEEEEcCCC-eEEEECCCCCCH
Confidence 35566666665 888999999999
No 94
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=61.26 E-value=1.3 Score=38.02 Aligned_cols=13 Identities=38% Similarity=0.618 Sum_probs=11.8
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
-.|||+|++||||
T Consensus 4 ~IIgitG~~gSGK 16 (191)
T d1uf9a_ 4 IIIGITGNIGSGK 16 (191)
T ss_dssp EEEEEEECTTSCH
T ss_pred EEEEEECCCCCCH
Confidence 3689999999999
No 95
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.23 E-value=1.3 Score=38.23 Aligned_cols=14 Identities=43% Similarity=0.591 Sum_probs=12.3
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
-..+.|+||+||||
T Consensus 8 ~~iI~i~GppGSGK 21 (196)
T d1ukza_ 8 VSVIFVLGGPGAGK 21 (196)
T ss_dssp CEEEEEECSTTSSH
T ss_pred CcEEEEECCCCCCH
Confidence 34699999999999
No 96
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=60.66 E-value=1.5 Score=38.62 Aligned_cols=12 Identities=50% Similarity=0.936 Sum_probs=11.1
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|||-||+||||
T Consensus 5 ~IaIdGp~GsGK 16 (223)
T d1q3ta_ 5 QIAIDGPASSGK 16 (223)
T ss_dssp EEEEECSSCSSH
T ss_pred EEEEECCCCCCH
Confidence 588999999999
No 97
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=60.30 E-value=1.5 Score=38.38 Aligned_cols=12 Identities=58% Similarity=1.002 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|+|-||+||||
T Consensus 5 iI~I~GppGSGK 16 (225)
T d1ckea_ 5 VITIDGPSGAGK 16 (225)
T ss_dssp EEEEECCTTSSH
T ss_pred EEEEECCCCCCH
Confidence 799999999999
No 98
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=60.00 E-value=9 Score=32.96 Aligned_cols=44 Identities=5% Similarity=0.168 Sum_probs=34.2
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
+.+|+|+||+-. |...+...+.+.|++-.++...|++|++++.+
T Consensus 79 ~~KviIId~ad~-l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~l 122 (198)
T d2gnoa2 79 TRKYVIVHDCER-MTQQAANAFLKALEEPPEYAVIVLNTRRWHYL 122 (198)
T ss_dssp SSEEEEETTGGG-BCHHHHHHTHHHHHSCCTTEEEEEEESCGGGS
T ss_pred CCEEEEEeCccc-cchhhhhHHHHHHhCCCCCceeeeccCChhhC
Confidence 357999999754 67778888888888765677788899998743
No 99
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=59.79 E-value=1.5 Score=37.24 Aligned_cols=12 Identities=42% Similarity=0.722 Sum_probs=11.2
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
++.|+||+||||
T Consensus 2 ~I~i~G~pGSGK 13 (179)
T d1e4va1 2 RIILLGAPVAGK 13 (179)
T ss_dssp EEEEEESTTSSH
T ss_pred EEEEECCCCCCH
Confidence 688999999999
No 100
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=59.53 E-value=1.6 Score=36.89 Aligned_cols=12 Identities=42% Similarity=0.858 Sum_probs=11.2
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|+|++||||
T Consensus 2 ~I~i~G~pGSGK 13 (182)
T d1zina1 2 NLVLMGLPGAGK 13 (182)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 588999999999
No 101
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=58.87 E-value=14 Score=31.85 Aligned_cols=43 Identities=5% Similarity=0.118 Sum_probs=28.1
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLST 561 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~ 561 (607)
+.+|+|+||+=. +..++...+.+.|++-.++...|++|++++.
T Consensus 108 ~~kviIide~d~-l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ 150 (207)
T d1a5ta2 108 GAKVVWVTDAAL-LTDAAANALLKTLEEPPAETWFFLATREPER 150 (207)
T ss_dssp SCEEEEESCGGG-BCHHHHHHHHHHHTSCCTTEEEEEEESCGGG
T ss_pred ccceEEechhhh-hhhhhhHHHHHHHHhhcccceeeeeecChhh
Confidence 457999998743 3445666666666654334445778999863
No 102
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=58.08 E-value=1.8 Score=36.85 Aligned_cols=12 Identities=50% Similarity=0.891 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|+|++||||
T Consensus 2 ~I~i~G~pGSGK 13 (182)
T d1s3ga1 2 NIVLMGLPGAGK 13 (182)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 688999999999
No 103
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=58.04 E-value=2.6 Score=37.28 Aligned_cols=21 Identities=29% Similarity=0.585 Sum_probs=17.6
Q ss_pred EEEEEcCCCCcc----------------eEEEccCCC
Q 007337 427 KIALVGPSGGGK----------------ISIVSQEPV 447 (607)
Q Consensus 427 ~vaiVG~sGsGK----------------i~~V~Q~~~ 447 (607)
.|+|+|+.|||| ++.|..||.
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~~~~~~~ivn~d~~ 38 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTG 38 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTTTSCEEEEECCSS
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHhhCCeEEEEecCcc
Confidence 589999999999 777777764
No 104
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=57.64 E-value=1.7 Score=36.37 Aligned_cols=12 Identities=42% Similarity=0.783 Sum_probs=10.9
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|.|+|++||||
T Consensus 2 ~I~liG~~GsGK 13 (161)
T d1viaa_ 2 NIVFIGFMGSGK 13 (161)
T ss_dssp CEEEECCTTSCH
T ss_pred cEEEECCCCCCH
Confidence 478999999999
No 105
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=57.09 E-value=2.4 Score=36.27 Aligned_cols=24 Identities=38% Similarity=0.621 Sum_probs=19.3
Q ss_pred ccccceEEeeCCCEEEEEcCCCCcc
Q 007337 414 VLKGITLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 414 vL~~isl~i~~Ge~vaiVG~sGsGK 438 (607)
.++.-.+.+ .|.-|.|.|+||+||
T Consensus 5 ~~H~~~v~~-~g~gvli~G~sG~GK 28 (177)
T d1knxa2 5 QIHGVLLEV-FGVGVLLTGRSGIGK 28 (177)
T ss_dssp EEEEEEEEE-TTEEEEEEESSSSSH
T ss_pred eEEEEEEEE-CCEEEEEEcCCCCCH
Confidence 455555555 889999999999999
No 106
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=56.97 E-value=1.9 Score=35.18 Aligned_cols=12 Identities=42% Similarity=0.758 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|+|++||||
T Consensus 2 kivlvG~~~vGK 13 (160)
T d1r8sa_ 2 RILMVGLDAAGK 13 (160)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 107
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=55.33 E-value=2.1 Score=35.18 Aligned_cols=12 Identities=42% Similarity=0.883 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|+|||++|+||
T Consensus 7 kI~ivG~~~vGK 18 (169)
T d1upta_ 7 RILILGLDGAGK 18 (169)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 599999999999
No 108
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=55.08 E-value=1.7 Score=37.23 Aligned_cols=12 Identities=33% Similarity=0.706 Sum_probs=11.2
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.|.||+||||
T Consensus 5 ~I~i~GppGsGK 16 (189)
T d1zaka1 5 KVMISGAPASGK 16 (189)
T ss_dssp CEEEEESTTSSH
T ss_pred EEEEECCCCCCH
Confidence 588999999999
No 109
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=54.89 E-value=2.1 Score=40.25 Aligned_cols=15 Identities=40% Similarity=0.851 Sum_probs=12.3
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
|+.-+.++||+||||
T Consensus 48 ~~~~iLl~GPpG~GK 62 (309)
T d1ofha_ 48 TPKNILMIGPTGVGK 62 (309)
T ss_dssp CCCCEEEECCTTSSH
T ss_pred CCceEEEECCCCCCH
Confidence 445667999999999
No 110
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=53.93 E-value=2.1 Score=35.97 Aligned_cols=13 Identities=38% Similarity=0.616 Sum_probs=11.5
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
+.|.++|++||||
T Consensus 3 ~~Iil~G~~GsGK 15 (170)
T d1e6ca_ 3 EPIFMVGARGCGM 15 (170)
T ss_dssp CCEEEESCTTSSH
T ss_pred CCEEEECCCCCCH
Confidence 4577999999999
No 111
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=53.16 E-value=2.1 Score=39.75 Aligned_cols=19 Identities=26% Similarity=0.408 Sum_probs=18.1
Q ss_pred EEeeCCCEEEEEcCCCCcc
Q 007337 420 LKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 420 l~i~~Ge~vaiVG~sGsGK 438 (607)
+.|-+||+++|+|++|+||
T Consensus 38 ~PigrGQr~~I~g~~g~GK 56 (289)
T d1xpua3 38 SPIGRGQRGLIVAPPKAGK 56 (289)
T ss_dssp SCCBTTCEEEEEECSSSSH
T ss_pred ccccCCCeeeEeCCCCCCH
Confidence 6789999999999999999
No 112
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=53.06 E-value=2.3 Score=37.35 Aligned_cols=17 Identities=41% Similarity=0.421 Sum_probs=15.6
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
=++|.+|.+.|.|||||
T Consensus 21 ~~kg~vIwltGlsGsGK 37 (208)
T d1m7ga_ 21 NQRGLTIWLTGLSASGK 37 (208)
T ss_dssp TSSCEEEEEECSTTSSH
T ss_pred CCCCeEEEEECCCCCCH
Confidence 36889999999999999
No 113
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=52.84 E-value=2.4 Score=36.91 Aligned_cols=12 Identities=42% Similarity=0.709 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|||+|.+||||
T Consensus 4 iIgITG~igSGK 15 (205)
T d1jjva_ 4 IVGLTGGIGSGK 15 (205)
T ss_dssp EEEEECSTTSCH
T ss_pred EEEEECCCCCCH
Confidence 589999999999
No 114
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=52.82 E-value=46 Score=29.59 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHhcCCC-EEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 503 GGQKQRVAIARALMMNPR-ILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 503 GGQkQRialARAll~~~~-IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
-..++|..+.+..+.+.+ ++|||+.= |...- +.+.. ....|+||.|-..+
T Consensus 119 ~~~~~~~~~~~~~L~~kr~LlVLDDv~---~~~~~----~~~~~---~~srilvTTR~~~v 169 (277)
T d2a5yb3 119 TSVVLKRMICNALIDRPNTLFVFDDVV---QEETI----RWAQE---LRLRCLVTTRDVEI 169 (277)
T ss_dssp CHHHHHHHHHHHHTTSTTEEEEEEEEC---CHHHH----HHHHH---TTCEEEEEESBGGG
T ss_pred hhHHHHHHHHHHHhccCCeeEecchhh---HHhhh----hhhcc---cCceEEEEeehHHH
Confidence 355777777777776654 67799863 22221 22222 34566777775543
No 115
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=52.71 E-value=2.8 Score=36.00 Aligned_cols=15 Identities=33% Similarity=0.581 Sum_probs=13.1
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+.-++.|+||.||||
T Consensus 5 r~mrIiliG~PGSGK 19 (189)
T d2ak3a1 5 RLLRAAIMGAPGSGK 19 (189)
T ss_dssp CCCEEEEECCTTSSH
T ss_pred cceeEEEECCCCCCH
Confidence 446889999999999
No 116
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.25 E-value=2.8 Score=36.70 Aligned_cols=16 Identities=38% Similarity=0.501 Sum_probs=15.1
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
++|..|+|.|+-||||
T Consensus 1 ~rG~lI~ieG~dGsGK 16 (209)
T d1nn5a_ 1 RRGALIVLEGVDRAGK 16 (209)
T ss_dssp CCCCEEEEEESTTSSH
T ss_pred CCeeEEEEECCCCCCH
Confidence 5899999999999999
No 117
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.22 E-value=2.7 Score=34.17 Aligned_cols=12 Identities=33% Similarity=0.670 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
++++||++|+||
T Consensus 2 KI~liG~~nvGK 13 (166)
T d2qtvb1 2 KLLFLGLDNAGK 13 (166)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 789999999999
No 118
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=50.52 E-value=2.8 Score=35.44 Aligned_cols=12 Identities=50% Similarity=1.162 Sum_probs=11.1
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.+.|.||+||||
T Consensus 2 ~I~i~G~pGsGK 13 (181)
T d2cdna1 2 RVLLLGPPGAGK 13 (181)
T ss_dssp EEEEECCTTSSH
T ss_pred EEEEECCCCCCH
Confidence 578999999999
No 119
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=50.40 E-value=2.3 Score=35.63 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=13.3
Q ss_pred CCCEEEEEcCCCCcce
Q 007337 424 SGSKIALVGPSGGGKI 439 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGKi 439 (607)
+--+|+|||++|+||-
T Consensus 12 k~~kI~lvG~~~vGKT 27 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKT 27 (186)
T ss_dssp CCEEEEEEEETTSSHH
T ss_pred CCCEEEEECCCCCCHH
Confidence 3457999999999993
No 120
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=48.67 E-value=4.6 Score=35.30 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=24.8
Q ss_pred hcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCC
Q 007337 516 MMNPRILLLDEATSALDAESEYLVQDAMDSLMKGR 550 (607)
Q Consensus 516 l~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~ 550 (607)
+++.+.+++||+-.-+|..-+..+.+.++.+.+++
T Consensus 149 l~~l~~lVlDEad~lld~~f~~~v~~I~~~~~~~~ 183 (212)
T d1qdea_ 149 TDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT 183 (212)
T ss_dssp CTTCCEEEEETHHHHHHTTCHHHHHHHHHHSCTTC
T ss_pred cCcceEEeehhhhhhcccchHHHHHHHHHhCCCCC
Confidence 46788999999988888765566666666554443
No 121
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=48.60 E-value=4 Score=38.51 Aligned_cols=15 Identities=27% Similarity=0.656 Sum_probs=13.2
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+.-+|||+|+.||||
T Consensus 53 ~~~~IgitG~pGaGK 67 (327)
T d2p67a1 53 NTLRLGVTGTPGAGK 67 (327)
T ss_dssp CSEEEEEEECTTSCH
T ss_pred CceEEEeeCCCCCCH
Confidence 346799999999999
No 122
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=48.37 E-value=3.3 Score=35.98 Aligned_cols=15 Identities=33% Similarity=0.547 Sum_probs=14.3
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+|..|+|-|+.||||
T Consensus 1 rgkfIviEG~dGsGK 15 (210)
T d4tmka_ 1 RSKYIVIEGLEGAGK 15 (210)
T ss_dssp CCCEEEEEECTTSCH
T ss_pred CCCEEEEECCCCCCH
Confidence 689999999999999
No 123
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=47.95 E-value=3.3 Score=34.86 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=24.8
Q ss_pred HhcCCCEEE--EeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCch
Q 007337 515 LMMNPRILL--LDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLS 560 (607)
Q Consensus 515 ll~~~~Ill--LDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~ 560 (607)
-+++++++| +| ++...+... ..+.+.+++...++-+|+|....+
T Consensus 81 ~~~~ad~il~v~D-~~~~~~~~~-~~i~~~l~~~~~~~piilv~NK~D 126 (178)
T d1wf3a1 81 ALADVNAVVWVVD-LRHPPTPED-ELVARALKPLVGKVPILLVGNKLD 126 (178)
T ss_dssp HTSSCSEEEEEEE-TTSCCCHHH-HHHHHHHGGGTTTSCEEEEEECGG
T ss_pred ccccccceeeeec-hhhhhcccc-cchhhheeccccchhhhhhhcccc
Confidence 367888554 45 455555543 455666766555555565554443
No 124
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=47.85 E-value=1.6 Score=39.05 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=14.2
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+|++++++|+||.||
T Consensus 96 ~~~~~vl~G~SGVGK 110 (231)
T d1t9ha2 96 QDKTTVFAGQSGVGK 110 (231)
T ss_dssp TTSEEEEEESHHHHH
T ss_pred ccceEEEECCCCccH
Confidence 689999999999999
No 125
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=47.79 E-value=2.9 Score=35.76 Aligned_cols=12 Identities=58% Similarity=0.736 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|||||++|+||
T Consensus 25 ~I~lvG~~n~GK 36 (195)
T d1svia_ 25 EIALAGRSNVGK 36 (195)
T ss_dssp EEEEEEBTTSSH
T ss_pred EEEEECCCCCCH
Confidence 599999999999
No 126
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=47.48 E-value=4.6 Score=34.31 Aligned_cols=17 Identities=35% Similarity=0.515 Sum_probs=15.0
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
.-.|.-|.|+|+||+||
T Consensus 11 ~~~g~gvl~~G~sG~GK 27 (176)
T d1kkma_ 11 DIYGLGVLITGDSGVGK 27 (176)
T ss_dssp EETTEEEEEECCTTSCH
T ss_pred EECCEEEEEEeCCCCCH
Confidence 44688899999999999
No 127
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=47.39 E-value=3.3 Score=36.10 Aligned_cols=12 Identities=50% Similarity=0.761 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|||+|..||||
T Consensus 5 iIgitG~igSGK 16 (208)
T d1vhta_ 5 IVALTGGIGSGK 16 (208)
T ss_dssp EEEEECCTTSCH
T ss_pred EEEEECCCcCCH
Confidence 689999999999
No 128
>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}
Probab=47.33 E-value=4.1 Score=33.23 Aligned_cols=25 Identities=32% Similarity=0.426 Sum_probs=21.7
Q ss_pred cCEEEEEeCCEEeEecChhHHhhcC
Q 007337 565 ADTVAVVSDGEIVESGTHEELLSKG 589 (607)
Q Consensus 565 aD~Iivl~~G~Ive~G~~~eL~~~~ 589 (607)
-|=.+++++|+|++.|++++|.+..
T Consensus 32 ~DG~llie~G~I~a~G~~~~l~~~~ 56 (140)
T d2ooda1 32 QDGLMVVTDGVIKAFGPYEKIAAAH 56 (140)
T ss_dssp EEEEEEEESSBEEEEEEHHHHHHHS
T ss_pred cCcEEEEeCCEEEEecCHHHHhhcC
Confidence 4678999999999999999997653
No 129
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=46.87 E-value=2.9 Score=34.83 Aligned_cols=12 Identities=58% Similarity=0.872 Sum_probs=10.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|.++|++||||
T Consensus 3 ~IvliG~~G~GK 14 (165)
T d2iyva1 3 KAVLVGLPGSGK 14 (165)
T ss_dssp SEEEECSTTSSH
T ss_pred cEEEECCCCCCH
Confidence 367889999999
No 130
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=46.38 E-value=3.6 Score=33.95 Aligned_cols=16 Identities=25% Similarity=0.648 Sum_probs=13.0
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+|||++||||-+++
T Consensus 4 ki~ivG~~~~GKTsLi 19 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTIL 19 (165)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 6899999999994433
No 131
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.25 E-value=3.6 Score=34.00 Aligned_cols=51 Identities=16% Similarity=0.175 Sum_probs=29.0
Q ss_pred HHHHHHhcCCCEEEEeccCCCCCHHHHHHHH---HHHHHhcCCCeEEEEccCchhh
Q 007337 510 AIARALMMNPRILLLDEATSALDAESEYLVQ---DAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 510 alARAll~~~~IllLDE~TSaLD~~te~~i~---~~l~~~~~~~TvI~ItHrl~~l 562 (607)
.+.+..+++++++++- .+.-|+.+...+. +.+.+..++..+|+|....+..
T Consensus 66 ~~~~~~~~~~~~~i~v--~d~~~~~s~~~~~~~~~~i~~~~~~~~iilVgnK~Dl~ 119 (164)
T d1z2aa1 66 AITKAYYRGAQACVLV--FSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLL 119 (164)
T ss_dssp CCCHHHHTTCCEEEEE--EETTCHHHHHTHHHHHHHHHHHHCSCCEEEEEECGGGG
T ss_pred hhhhhhhccCceEEEE--EeccchhhhhhcccccccccccCCCceEEEeeccCCcc
Confidence 3446678899877652 2233444444433 3444455677777777665543
No 132
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=46.12 E-value=3.5 Score=35.39 Aligned_cols=12 Identities=42% Similarity=0.617 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|++||.+||||
T Consensus 4 li~l~GlpgsGK 15 (213)
T d1bifa1 4 LIVMVGLPARGK 15 (213)
T ss_dssp EEEEECCTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 133
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.88 E-value=3.7 Score=34.19 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.0
Q ss_pred EEEEEcCCCCcceE
Q 007337 427 KIALVGPSGGGKIS 440 (607)
Q Consensus 427 ~vaiVG~sGsGKi~ 440 (607)
+|++||++|+||-+
T Consensus 7 Ki~vvG~~~vGKTs 20 (169)
T d3raba_ 7 KILIIGNSSVGKTS 20 (169)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 48999999999933
No 134
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=45.88 E-value=4.5 Score=36.83 Aligned_cols=18 Identities=33% Similarity=0.617 Sum_probs=17.1
Q ss_pred EeeCCCEEEEEcCCCCcc
Q 007337 421 KLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 421 ~i~~Ge~vaiVG~sGsGK 438 (607)
=+++|..+-|.|++||||
T Consensus 50 Gi~~g~itei~G~~gsGK 67 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGK 67 (263)
T ss_dssp SEETTSEEEEECSTTSSH
T ss_pred CccCceEEEEecCCCcHH
Confidence 478999999999999999
No 135
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.67 E-value=4 Score=34.14 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=27.2
Q ss_pred HHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHH---HHHh-cCCCeEEEEccCch
Q 007337 510 AIARALMMNPRILLLDEATSALDAESEYLVQDA---MDSL-MKGRTVLVIAHRLS 560 (607)
Q Consensus 510 alARAll~~~~IllLDE~TSaLD~~te~~i~~~---l~~~-~~~~TvI~ItHrl~ 560 (607)
.+.+..+++++.+|+ ..+.-|+.+-..+.+. +.+. .++..+++|.+..+
T Consensus 67 ~~~~~~~~~~d~~il--v~d~~~~~sf~~~~~~~~~~~~~~~~~~piilv~nK~D 119 (173)
T d2a5ja1 67 SITRSYYRGAAGALL--VYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 119 (173)
T ss_dssp CCCHHHHTTCSEEEE--EEETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTT
T ss_pred hHHHHHhhccCEEEE--EEeecChHHHHhHHHHHHHHHHhCCCCCeEEEEecCCc
Confidence 355666788877775 3333444444444333 3332 24567888877654
No 136
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.50 E-value=3.9 Score=34.48 Aligned_cols=13 Identities=46% Similarity=1.078 Sum_probs=11.4
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
-++.|.||.||||
T Consensus 3 mrIvl~G~pGSGK 15 (180)
T d1akya1 3 IRMVLIGPPGAGK 15 (180)
T ss_dssp CEEEEECCTTSSH
T ss_pred eEEEEECCCCCCH
Confidence 3578999999999
No 137
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=44.49 E-value=3.2 Score=34.84 Aligned_cols=12 Identities=33% Similarity=0.332 Sum_probs=10.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
++.|.|++||||
T Consensus 3 iivi~G~~GsGK 14 (194)
T d1nksa_ 3 IGIVTGIPGVGK 14 (194)
T ss_dssp EEEEEECTTSCH
T ss_pred EEEEECCCCCCH
Confidence 567889999999
No 138
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.34 E-value=4 Score=34.04 Aligned_cols=16 Identities=44% Similarity=0.777 Sum_probs=13.0
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|++||++|+||-+++
T Consensus 4 Ki~~vG~~~vGKSsLi 19 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLM 19 (175)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994443
No 139
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.15 E-value=3.8 Score=33.97 Aligned_cols=13 Identities=46% Similarity=0.621 Sum_probs=12.0
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
-+|+|+|++|+||
T Consensus 5 ~Kv~liG~~~vGK 17 (167)
T d1xtqa1 5 RKIAILGYRSVGK 17 (167)
T ss_dssp EEEEEEESTTSSH
T ss_pred eEEEEECCCCcCH
Confidence 3799999999999
No 140
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.65 E-value=4.2 Score=33.80 Aligned_cols=15 Identities=40% Similarity=0.749 Sum_probs=12.6
Q ss_pred EEEEEcCCCCcceEE
Q 007337 427 KIALVGPSGGGKISI 441 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~ 441 (607)
+|+++|.+|+||-++
T Consensus 4 Ki~viG~~~vGKTsL 18 (171)
T d2erxa1 4 RVAVFGAGGVGKSSL 18 (171)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 689999999999443
No 141
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.59 E-value=4.2 Score=33.95 Aligned_cols=17 Identities=41% Similarity=0.681 Sum_probs=9.3
Q ss_pred EEEEEcCCCCcceEEEc
Q 007337 427 KIALVGPSGGGKISIVS 443 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V~ 443 (607)
+|+++|.+|+||-+++.
T Consensus 8 Ki~vvG~~~vGKTsLi~ 24 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLF 24 (173)
T ss_dssp EEEEECCCCC-------
T ss_pred EEEEECCCCcCHHHHHH
Confidence 58999999999955543
No 142
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=43.58 E-value=4.1 Score=36.40 Aligned_cols=15 Identities=20% Similarity=0.273 Sum_probs=13.8
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
.+..+.|+||+|+||
T Consensus 28 ~~~~i~i~G~~G~GK 42 (283)
T d2fnaa2 28 RAPITLVLGLRRTGK 42 (283)
T ss_dssp CSSEEEEEESTTSSH
T ss_pred cCCEEEEEcCCCCcH
Confidence 568899999999999
No 143
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.47 E-value=3.9 Score=33.85 Aligned_cols=15 Identities=40% Similarity=0.751 Sum_probs=12.6
Q ss_pred EEEEEcCCCCcceEE
Q 007337 427 KIALVGPSGGGKISI 441 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~ 441 (607)
+|++||++|+||-++
T Consensus 5 Ki~viG~~~vGKTsl 19 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSAL 19 (166)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 599999999999443
No 144
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=43.43 E-value=3.9 Score=34.50 Aligned_cols=12 Identities=42% Similarity=0.601 Sum_probs=11.2
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
-|||+|++++||
T Consensus 3 ~VaiiG~~nvGK 14 (185)
T d1lnza2 3 DVGLVGFPSVGK 14 (185)
T ss_dssp CEEEESSTTSSH
T ss_pred eEEEECCCCCCH
Confidence 489999999999
No 145
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.35 E-value=4.2 Score=33.63 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHH---HHhc--CCCeEEEEccCchhh
Q 007337 504 GQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAM---DSLM--KGRTVLVIAHRLSTV 562 (607)
Q Consensus 504 GQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l---~~~~--~~~TvI~ItHrl~~l 562 (607)
||...-.+.+..+++++++++- .+.-|..+-..+.+-. .... .+.-+++|.+..+..
T Consensus 60 g~~~~~~~~~~~~~~a~~~ilv--~d~~~~~s~~~~~~~~~~~~~~~~~~~~piilvgnK~Dl~ 121 (167)
T d1kaoa_ 60 GTEQFASMRDLYIKNGQGFILV--YSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLE 121 (167)
T ss_dssp CTTCCHHHHHHHHHHCSEEEEE--EETTCHHHHHHHHHHHHHHHHHTTTSCCCEEEEEECGGGG
T ss_pred CccccccchHHHhhcccceeee--eeecchhhhhhhhchhhhhhhhccCCCCCEEEEEEccchh
Confidence 3444445666778888876653 2222555444444333 2221 234577777766543
No 146
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.32 E-value=4 Score=35.95 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.8
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+++.|+|-|+.||||
T Consensus 1 ~~k~I~ieG~dGsGK 15 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGK 15 (241)
T ss_dssp CCEEEEEECSTTSSH
T ss_pred CCCEEEEECCCCCCH
Confidence 468999999999999
No 147
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.08 E-value=4.3 Score=33.73 Aligned_cols=15 Identities=40% Similarity=0.740 Sum_probs=12.5
Q ss_pred EEEEEcCCCCcceEE
Q 007337 427 KIALVGPSGGGKISI 441 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~ 441 (607)
+|.+||++|+||-++
T Consensus 4 Ki~lvG~~~vGKTsl 18 (168)
T d2atva1 4 KLAIFGRAGVGKSAL 18 (168)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 589999999999443
No 148
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=42.90 E-value=4.3 Score=33.71 Aligned_cols=53 Identities=9% Similarity=0.252 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCCEEE-EeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 507 QRVAIARALMMNPRILL-LDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 507 QRialARAll~~~~Ill-LDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
....-++..+.++++++ +.+++.......+. +.+.++.. ++-+|+|....+.+
T Consensus 69 ~~~~~~~~~~~~ad~i~~~~~~~~~~~~~~~~-~~~~l~~~--~~pviiv~NK~Dl~ 122 (171)
T d1mkya1 69 KMKEVTLNMIREADLVLFVVDGKRGITKEDES-LADFLRKS--TVDTILVANKAENL 122 (171)
T ss_dssp HHHHHHHHHHTTCSEEEEEEETTTCCCHHHHH-HHHHHHHH--TCCEEEEEESCCSH
T ss_pred ccccccccccccCcEEEEeecccccccccccc-cccccccc--cccccccchhhhhh
Confidence 34445566678888776 45555666665544 44455543 45466666665543
No 149
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=42.79 E-value=4.1 Score=36.53 Aligned_cols=13 Identities=38% Similarity=0.647 Sum_probs=11.6
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
.-+.++||+||||
T Consensus 33 ~~ilL~GpPGtGK 45 (273)
T d1gvnb_ 33 TAFLLGGQPGSGK 45 (273)
T ss_dssp EEEEEECCTTSCT
T ss_pred EEEEEECCCCCCH
Confidence 3588999999999
No 150
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=42.79 E-value=4 Score=37.45 Aligned_cols=17 Identities=18% Similarity=0.135 Sum_probs=15.8
Q ss_pred eeCCCEEEEEcCCCCcc
Q 007337 422 LLSGSKIALVGPSGGGK 438 (607)
Q Consensus 422 i~~Ge~vaiVG~sGsGK 438 (607)
+++|+.+.|.+|+||||
T Consensus 6 ~~~~~~~lv~~~TGsGK 22 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGK 22 (305)
T ss_dssp SSTTCEEEECCCTTSST
T ss_pred hhcCCcEEEEECCCCCH
Confidence 56899999999999999
No 151
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.71 E-value=4.3 Score=34.78 Aligned_cols=12 Identities=42% Similarity=0.866 Sum_probs=11.6
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|+|||++|+||
T Consensus 5 ~V~lvG~~n~GK 16 (209)
T d1nrjb_ 5 SIIIAGPQNSGK 16 (209)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 789999999999
No 152
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=42.51 E-value=5.7 Score=33.45 Aligned_cols=19 Identities=37% Similarity=0.482 Sum_probs=16.2
Q ss_pred EEeeCCCEEEEEcCCCCcc
Q 007337 420 LKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 420 l~i~~Ge~vaiVG~sGsGK 438 (607)
+-.-.|.=|.|.|+||+||
T Consensus 10 ~v~~~g~gvli~G~sg~GK 28 (169)
T d1ko7a2 10 LVDVYGVGVLITGDSGIGK 28 (169)
T ss_dssp EEEETTEEEEEEESTTSSH
T ss_pred EEEECCEEEEEEeCCCCCH
Confidence 3345788999999999999
No 153
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=42.48 E-value=4.3 Score=37.19 Aligned_cols=20 Identities=40% Similarity=0.564 Sum_probs=18.6
Q ss_pred eEEeeCCCEEEEEcCCCCcc
Q 007337 419 TLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 419 sl~i~~Ge~vaiVG~sGsGK 438 (607)
=+.+-+||+++|.|++|+||
T Consensus 62 l~pigkGQr~~If~~~g~GK 81 (276)
T d2jdid3 62 LAPYAKGGKIGLFGGAGVGK 81 (276)
T ss_dssp HSCEETTCEEEEEECTTSSH
T ss_pred eccccCCCEEEeeCCCCCCH
Confidence 36789999999999999999
No 154
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.40 E-value=4.5 Score=34.14 Aligned_cols=48 Identities=8% Similarity=0.013 Sum_probs=27.0
Q ss_pred HHHhcCCCEEEEeccCCCCCHHHH----HHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 513 RALMMNPRILLLDEATSALDAESE----YLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 513 RAll~~~~IllLDE~TSaLD~~te----~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
...+++++.++|= .+.-|..+- ....+.++....+.-+|+|....+..
T Consensus 71 ~~~~~~~~~~ilv--~d~~~~~sf~~i~~~~~~~~~~~~~~~piilvgnK~Dl~ 122 (183)
T d1mh1a_ 71 PLSYPQTDVSLIC--FSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 122 (183)
T ss_dssp GGGCTTCSEEEEE--EETTCHHHHHHHHHTHHHHHHHHSTTSCEEEEEECHHHH
T ss_pred hhcccccceeeee--eccchHHHHHHHHHHHHHHHHHhCCCCcEEEEeecccch
Confidence 3456777776651 222244432 23445555555667788888777643
No 155
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.65 E-value=4.7 Score=33.49 Aligned_cols=56 Identities=9% Similarity=0.019 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHH---HHHHHhcC--CCeEEEEccCchh
Q 007337 504 GQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQ---DAMDSLMK--GRTVLVIAHRLST 561 (607)
Q Consensus 504 GQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~---~~l~~~~~--~~TvI~ItHrl~~ 561 (607)
||..=-.+.+..+++++.+|+ ..+.-|+.+-..+. +.+..... +..+++|.+..+.
T Consensus 57 g~e~~~~~~~~~~~~~d~~il--v~d~t~~~s~~~~~~~~~~i~~~~~~~~~piilvgnK~Dl 117 (168)
T d2gjsa1 57 EQDGGRWLPGHCMAMGDAYVI--VYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL 117 (168)
T ss_dssp -------CHHHHHTSCSEEEE--EEETTCHHHHHHHHHHHHHHHHHCC--CCCEEEEEECTTC
T ss_pred cccccceecccchhhhhhhce--eccccccccccccccccchhhcccccccceEEEeecccch
Confidence 333333577888999986554 11122444333333 33333322 2357788776654
No 156
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.58 E-value=4.3 Score=33.76 Aligned_cols=14 Identities=36% Similarity=0.681 Sum_probs=12.3
Q ss_pred EEEEEcCCCCcceE
Q 007337 427 KIALVGPSGGGKIS 440 (607)
Q Consensus 427 ~vaiVG~sGsGKi~ 440 (607)
+|+|||.+|+||-+
T Consensus 7 Ki~lvG~~~vGKTs 20 (171)
T d2erya1 7 RLVVVGGGGVGKSA 20 (171)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 69999999999933
No 157
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=41.37 E-value=4.4 Score=33.64 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=13.4
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
++.=+|+|||.+||||
T Consensus 13 ~k~~kI~vvG~~~~GK 28 (177)
T d1zj6a1 13 HQEHKVIIVGLDNAGK 28 (177)
T ss_dssp TSCEEEEEEESTTSSH
T ss_pred CCeEEEEEECCCCCCH
Confidence 3445799999999999
No 158
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.02 E-value=4.9 Score=33.59 Aligned_cols=48 Identities=8% Similarity=-0.032 Sum_probs=26.4
Q ss_pred HHHhcCCCEEEEeccCCCCCHHHHHHHHHHH---HHhc-CCCeEEEEccCchhh
Q 007337 513 RALMMNPRILLLDEATSALDAESEYLVQDAM---DSLM-KGRTVLVIAHRLSTV 562 (607)
Q Consensus 513 RAll~~~~IllLDE~TSaLD~~te~~i~~~l---~~~~-~~~TvI~ItHrl~~l 562 (607)
.+.+++++++|+- .+.-|+.+-..+.+-+ .+.. ++.-+++|.+..+..
T Consensus 71 ~~~~~~~~~~i~v--~d~~~~~S~~~~~~~~~~i~~~~~~~~piilvgnK~Dl~ 122 (175)
T d2f9la1 71 SAYYRGAVGALLV--YDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 122 (175)
T ss_dssp HHHHTTCSEEEEE--EETTCHHHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCG
T ss_pred HHHhhccCeEEEE--EECCCcccchhHHHHHHHHHHhcCCCCcEEEEEeeeccc
Confidence 3456778777764 2333555544444443 3332 345677787776643
No 159
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.55 E-value=4.6 Score=33.79 Aligned_cols=49 Identities=6% Similarity=0.096 Sum_probs=26.6
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHH----HHHHHHHHHhcCCCeEEEEccCchh
Q 007337 511 IARALMMNPRILLLDEATSALDAESE----YLVQDAMDSLMKGRTVLVIAHRLST 561 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te----~~i~~~l~~~~~~~TvI~ItHrl~~ 561 (607)
+.+..+++++.+|| ..+.=|+++- ....+.+.+..++..+++|....+.
T Consensus 66 ~~~~~~~~~~~~il--v~d~~~~~Sf~~~~~~~~~~~~~~~~~~piilvgnK~Dl 118 (177)
T d1kmqa_ 66 LRPLSYPDTDVILM--CFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 118 (177)
T ss_dssp TGGGGCTTCSEEEE--EEETTCHHHHHHHHHTHHHHHHHHSTTSCEEEEEECGGG
T ss_pred cchhhcccchhhhh--hcccchhHHHHHHHHHHHHHHHHhCCCCceEEeeecccc
Confidence 44667888887665 1112234432 2234445555556677777766554
No 160
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.37 E-value=5.1 Score=33.22 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=28.0
Q ss_pred HHHHHHhcCCCEEEEe-ccCCCCCHHHHHHHHHHH----HHhcCCCeEEEEccCchhhhh
Q 007337 510 AIARALMMNPRILLLD-EATSALDAESEYLVQDAM----DSLMKGRTVLVIAHRLSTVQS 564 (607)
Q Consensus 510 alARAll~~~~IllLD-E~TSaLD~~te~~i~~~l----~~~~~~~TvI~ItHrl~~l~~ 564 (607)
.+.+..+++++.+++= +.| |+.+-..+.... ........+++|.+.......
T Consensus 67 ~~~~~~~~~~~~~ilv~d~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~v~nk~d~~~~ 123 (170)
T d1ek0a_ 67 SLAPMYYRNAQAALVVYDVT---KPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123 (170)
T ss_dssp GGHHHHHTTCSEEEEEEETT---CHHHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGS
T ss_pred HHHHHHHhccceEEEEEeCC---cccchhhhhhhhhhhccccccccceeeeecccccccc
Confidence 3456678888865542 222 455444444333 223345677777776655443
No 161
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.89 E-value=5.2 Score=33.08 Aligned_cols=13 Identities=38% Similarity=0.580 Sum_probs=11.6
Q ss_pred EEEEEcCCCCcce
Q 007337 427 KIALVGPSGGGKI 439 (607)
Q Consensus 427 ~vaiVG~sGsGKi 439 (607)
+|+|||.+|+||-
T Consensus 5 KivlvG~~~vGKT 17 (167)
T d1z08a1 5 KVVLLGEGCVGKT 17 (167)
T ss_dssp EEEEECCTTSCHH
T ss_pred EEEEECCCCcCHH
Confidence 5899999999993
No 162
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.69 E-value=5.2 Score=33.70 Aligned_cols=16 Identities=44% Similarity=0.777 Sum_probs=12.9
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+++|.+|+||-+++
T Consensus 4 Kv~vvG~~~vGKSSLi 19 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLM 19 (184)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994433
No 163
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=39.68 E-value=5 Score=34.11 Aligned_cols=15 Identities=27% Similarity=0.432 Sum_probs=13.1
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+.-.|+|.|..||||
T Consensus 8 kp~~I~ieG~~GsGK 22 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGK 22 (197)
T ss_dssp CCEEEEEECSTTSCH
T ss_pred CceEEEEECCCCCCH
Confidence 345899999999999
No 164
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.58 E-value=5.3 Score=32.83 Aligned_cols=60 Identities=7% Similarity=0.117 Sum_probs=34.4
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHH---Hhc--CCCeEEEEccCchhh
Q 007337 501 LSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMD---SLM--KGRTVLVIAHRLSTV 562 (607)
Q Consensus 501 LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~---~~~--~~~TvI~ItHrl~~l 562 (607)
..|++...-...+..+++++.+|+ ..+.-|+++-+.+.+-+. +.. ++.-+++|.+..+..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~d~~il--v~d~~~~~s~~~~~~~~~~i~~~~~~~~~pi~lvgnK~Dl~ 122 (165)
T d1z06a1 58 TAGQERFRKSMVQHYYRNVHAVVF--VYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 122 (165)
T ss_dssp CCCSHHHHTTTHHHHHTTCCEEEE--EEETTCHHHHHTHHHHHHHHHHHCCCSCCCEEEEEECTTCG
T ss_pred ccCchhhccccceeeecCCCceEE--EEEeehhhhhhhhhhhhHHHHhhccCCCCeEEEEeccccch
Confidence 345666666666777888887764 122456665554443333 221 245677777776544
No 165
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.49 E-value=4.9 Score=33.02 Aligned_cols=51 Identities=4% Similarity=0.082 Sum_probs=30.2
Q ss_pred HHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHH----hcCCCeEEEEccCchhh
Q 007337 510 AIARALMMNPRILLLDEATSALDAESEYLVQDAMDS----LMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 510 alARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~----~~~~~TvI~ItHrl~~l 562 (607)
.+.+..+++++.+++ ..+.-|..+...+.+.+.. ...+..+++|.+..+..
T Consensus 64 ~~~~~~~~~~~~~il--v~d~~~~~s~~~i~~~~~~~~~~~~~~~~iilvgnK~Dl~ 118 (164)
T d1yzqa1 64 SLIPSYIRDSAAAVV--VYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLA 118 (164)
T ss_dssp GGHHHHHTTCSEEEE--EEETTCHHHHHTHHHHHHHHHHHHTTSSEEEEEEECTTCG
T ss_pred cchHHHhhccceEEE--eeccccccchhhhHhhHHHHHHhcCCCceEEEEecccchh
Confidence 355677889988886 2233445544444444332 33467788887776643
No 166
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=39.10 E-value=4.8 Score=33.84 Aligned_cols=12 Identities=50% Similarity=0.775 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|||+|++|+||
T Consensus 10 kV~iiG~~~~GK 21 (186)
T d1mkya2 10 KVAIVGRPNVGK 21 (186)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 699999999999
No 167
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.09 E-value=4.8 Score=33.66 Aligned_cols=12 Identities=42% Similarity=0.562 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|+|||++|+||
T Consensus 2 ~I~lvG~~nvGK 13 (184)
T d2cxxa1 2 TIIFAGRSNVGK 13 (184)
T ss_dssp EEEEEEBTTSSH
T ss_pred EEEEECCCCCCH
Confidence 589999999999
No 168
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.99 E-value=5.1 Score=33.05 Aligned_cols=16 Identities=50% Similarity=0.775 Sum_probs=13.0
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|++||++|+||-+++
T Consensus 4 Ki~vvG~~~vGKTSli 19 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLL 19 (166)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994443
No 169
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.97 E-value=5.4 Score=33.60 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHhcCCCEEE--EeccCCCCCHHHHHHHHHHHHHhcC-----CCeEEEEccCch
Q 007337 503 GGQKQRVAIARALMMNPRILL--LDEATSALDAESEYLVQDAMDSLMK-----GRTVLVIAHRLS 560 (607)
Q Consensus 503 GGQkQRialARAll~~~~Ill--LDE~TSaLD~~te~~i~~~l~~~~~-----~~TvI~ItHrl~ 560 (607)
+||..==.+.+..+++++.+| .| .-|+.+...+.+.+....+ ..-+++|....+
T Consensus 72 ~G~e~~~~~~~~~~~~~~~~i~v~d----~~~~~s~~~~~~~~~~~~~~~~~~~~~iilv~nK~D 132 (186)
T d2f7sa1 72 AGQERFRSLTTAFFRDAMGFLLMFD----LTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKAD 132 (186)
T ss_dssp ESHHHHHHHHHHHHTTCCEEEEEEE----TTCHHHHHHHHHHHHTCCCCCTTTCCEEEEEEECTT
T ss_pred CcchhhHHHHHHHHhcCCEEEEEEe----ccccccceeeeeccchhhhhccCCCceEEEEeeecc
Confidence 345444467778888888766 46 4556676666666554332 234556655544
No 170
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.94 E-value=5 Score=33.37 Aligned_cols=60 Identities=7% Similarity=0.136 Sum_probs=33.6
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEE-eccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchh
Q 007337 502 SGGQKQRVAIARALMMNPRILLL-DEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLST 561 (607)
Q Consensus 502 SGGQkQRialARAll~~~~IllL-DE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~ 561 (607)
.+||...-.+.+..+++++.+++ =++|+--..+.-....+.+.+..++.-+++|....+.
T Consensus 59 ~~g~~~~~~~~~~~~~~~~~~ilv~d~~~~~Sf~~~~~~~~~~~~~~~~~piilvgnK~Dl 119 (170)
T d1i2ma_ 59 TAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDI 119 (170)
T ss_dssp CTTHHHHSSCGGGGTTTCCEEEEEEETTSGGGGTTHHHHHHHHHHHHCSCCEEEEEECCCC
T ss_pred cccccccceecchhcccccchhhccccccccccchhHHHHHHHhhccCCCceeeecchhhh
Confidence 34666666677888999987765 2222211111122233334444567778888877764
No 171
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.79 E-value=5.8 Score=34.63 Aligned_cols=15 Identities=33% Similarity=0.459 Sum_probs=14.6
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+|..|+|-|..||||
T Consensus 2 kGk~I~iEG~DGsGK 16 (214)
T d1tmka_ 2 RGKLILIEGLDRTGK 16 (214)
T ss_dssp CCCEEEEEESTTSSH
T ss_pred CeEEEEEECCCCCcH
Confidence 799999999999999
No 172
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.76 E-value=5.6 Score=32.87 Aligned_cols=50 Identities=12% Similarity=0.109 Sum_probs=26.7
Q ss_pred HHHHHHhcCCCEEEE-eccCCCCCHHHHHHHH---HHHHHh--cCCCeEEEEccCchhh
Q 007337 510 AIARALMMNPRILLL-DEATSALDAESEYLVQ---DAMDSL--MKGRTVLVIAHRLSTV 562 (607)
Q Consensus 510 alARAll~~~~IllL-DE~TSaLD~~te~~i~---~~l~~~--~~~~TvI~ItHrl~~l 562 (607)
.+.+..+++++.+|+ -+.| |+++-..+. +.+.+. .++..+|+|.+..+..
T Consensus 66 ~~~~~~~~~~~~~ilv~d~~---~~~sf~~~~~~~~~~~~~~~~~~~p~ilvgnK~Dl~ 121 (167)
T d1c1ya_ 66 AMRDLYMKNGQGFALVYSIT---AQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLE 121 (167)
T ss_dssp THHHHHHHHCSEEEEEEETT---CHHHHHTHHHHHHHHHHHHCCSCCCEEEEEECTTCG
T ss_pred ccccccccccceeEEeeecc---chhhhHhHHHHHHHHHHhcCCCCCeEEEEEEecCcc
Confidence 344567888887776 2333 334333333 223222 2345678888777653
No 173
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.58 E-value=5.5 Score=33.13 Aligned_cols=16 Identities=44% Similarity=0.740 Sum_probs=12.7
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|++||++|+||-+++
T Consensus 8 KI~vvG~~~vGKSSli 23 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLM 23 (174)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999994433
No 174
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=38.55 E-value=5.2 Score=33.25 Aligned_cols=12 Identities=42% Similarity=0.744 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|++||++|+||
T Consensus 18 kI~vvG~~~vGK 29 (176)
T d1fzqa_ 18 RILLLGLDNAGK 29 (176)
T ss_dssp EEEEEESTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 175
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=38.47 E-value=5.1 Score=33.33 Aligned_cols=13 Identities=38% Similarity=0.657 Sum_probs=11.9
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
=+|+|+|++++||
T Consensus 17 ~~I~lvG~~NvGK 29 (188)
T d1puia_ 17 IEVAFAGRSNAGK 29 (188)
T ss_dssp EEEEEEECTTSSH
T ss_pred CEEEEECCCCCCH
Confidence 4599999999999
No 176
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.31 E-value=5.7 Score=32.75 Aligned_cols=16 Identities=31% Similarity=0.586 Sum_probs=13.0
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+|||.+|+||.+++
T Consensus 6 KivlvG~~~vGKTsli 21 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLL 21 (166)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994443
No 177
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.06 E-value=6 Score=33.99 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=17.2
Q ss_pred CChhHHHHHHHHHHHhcCCCEE--EEec
Q 007337 501 LSGGQKQRVAIARALMMNPRIL--LLDE 526 (607)
Q Consensus 501 LSGGQkQRialARAll~~~~Il--lLDE 526 (607)
..|.++.|....+.+++.++.+ +.|-
T Consensus 54 ~~g~~~~~~~~~~~~~~~~~~~i~v~D~ 81 (207)
T d2fh5b1 54 LPGHESLRFQLLDRFKSSARAVVFVVDS 81 (207)
T ss_dssp CCCCHHHHHHHHHHHGGGEEEEEEEEET
T ss_pred ccccccccchhhhhhhhhccccceEEEc
Confidence 4566777777888888776444 4553
No 178
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=37.98 E-value=5.8 Score=32.61 Aligned_cols=16 Identities=38% Similarity=0.584 Sum_probs=12.9
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+++|++|+||-+++
T Consensus 4 ki~i~G~~~~GKTsLl 19 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFV 19 (164)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 6889999999994433
No 179
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.76 E-value=5.8 Score=32.72 Aligned_cols=16 Identities=50% Similarity=0.814 Sum_probs=12.9
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+|||.+|+||-+++
T Consensus 6 Ki~lvG~~~vGKTsli 21 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIM 21 (167)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994433
No 180
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.59 E-value=5.9 Score=32.78 Aligned_cols=16 Identities=50% Similarity=0.704 Sum_probs=13.1
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|.+||++|+||.+++
T Consensus 8 Ki~vvG~~~vGKTsLi 23 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLV 23 (170)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 6899999999994443
No 181
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.09 E-value=5.6 Score=33.14 Aligned_cols=16 Identities=38% Similarity=0.665 Sum_probs=13.1
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+|||.+|+||-+++
T Consensus 8 Kv~lvG~~~vGKTsLi 23 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALT 23 (173)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 6899999999994433
No 182
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.50 E-value=5.9 Score=32.86 Aligned_cols=16 Identities=50% Similarity=0.833 Sum_probs=13.0
Q ss_pred EEEEEcCCCCcceEEE
Q 007337 427 KIALVGPSGGGKISIV 442 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~V 442 (607)
+|+|+|++|+||-+++
T Consensus 7 Ki~lvG~~~vGKTsLi 22 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLV 22 (171)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 5899999999994433
No 183
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=36.43 E-value=7.9 Score=36.25 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=13.0
Q ss_pred CCCEEEEEcCCCCcc
Q 007337 424 SGSKIALVGPSGGGK 438 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGK 438 (607)
+.-+|+|.|+.|+||
T Consensus 50 ~~~~igitG~pGaGK 64 (323)
T d2qm8a1 50 RAIRVGITGVPGVGK 64 (323)
T ss_dssp CSEEEEEECCTTSCH
T ss_pred CceEEeeeCCCCCCH
Confidence 346799999999999
No 184
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.34 E-value=5.9 Score=32.91 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHH---HHHHHHh-cCCCeEEEEccCchh
Q 007337 504 GQKQRVAIARALMMNPRILLLDEATSALDAESEYLV---QDAMDSL-MKGRTVLVIAHRLST 561 (607)
Q Consensus 504 GQkQRialARAll~~~~IllLDE~TSaLD~~te~~i---~~~l~~~-~~~~TvI~ItHrl~~ 561 (607)
||.+--.+.+..+++++.+|+.=..+ |.++-..+ ...+.+. .++.-+|+|......
T Consensus 63 G~~~~~~~~~~~~~~~~~~i~v~d~~--~~~s~~~~~~~~~~~~~~~~~~~piivv~nK~D~ 122 (174)
T d2bmea1 63 GQERFRSVTRSYYRGAAGALLVYDIT--SRETYNALTNWLTDARMLASQNIVIILCGNKKDL 122 (174)
T ss_dssp CSGGGHHHHHTTSTTCSEEEEEEETT--CHHHHHTHHHHHHHHHHHSCTTCEEEEEEECGGG
T ss_pred CchhhhhhHHHHhhhCCEEEEEEecc--cchhHHHHhhhhcccccccCCceEEEEEEecccc
Confidence 34444556677788888776543333 34433333 2333332 345677777766653
No 185
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.02 E-value=6.5 Score=32.51 Aligned_cols=15 Identities=53% Similarity=0.811 Sum_probs=12.6
Q ss_pred EEEEEcCCCCcceEE
Q 007337 427 KIALVGPSGGGKISI 441 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~ 441 (607)
+|+|||+.|+||-++
T Consensus 8 Ki~vvG~~~vGKTsl 22 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCL 22 (170)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 599999999999443
No 186
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=35.94 E-value=6.7 Score=31.08 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=24.1
Q ss_pred HHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHh
Q 007337 513 RALMMNPRILLLDEATSALDAESEYLVQDAMDSL 546 (607)
Q Consensus 513 RAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~ 546 (607)
+..+++-+++|+||+= .+|+.+...+...++..
T Consensus 89 ~~~~~~~~~vIiDE~H-~~~~~~~~~~~~~l~~~ 121 (136)
T d1a1va1 89 GCSGGAYDIIICDECH-STDATSILGIGTVLDQA 121 (136)
T ss_dssp GGGGCCCSEEEEETTT-CCSHHHHHHHHHHHHHT
T ss_pred chhhhcCCEEEEeccc-ccCHHHHHHHHHHHHHH
Confidence 3456778999999996 46888777776666543
No 187
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.46 E-value=6.2 Score=33.15 Aligned_cols=14 Identities=50% Similarity=0.665 Sum_probs=12.1
Q ss_pred EEEEEcCCCCcceE
Q 007337 427 KIALVGPSGGGKIS 440 (607)
Q Consensus 427 ~vaiVG~sGsGKi~ 440 (607)
+|.++|.+|+||-+
T Consensus 4 KivliG~~~vGKTs 17 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTA 17 (179)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 68999999999933
No 188
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=35.32 E-value=4.9 Score=33.68 Aligned_cols=11 Identities=45% Similarity=0.776 Sum_probs=10.8
Q ss_pred EEEEcCCCCcc
Q 007337 428 IALVGPSGGGK 438 (607)
Q Consensus 428 vaiVG~sGsGK 438 (607)
|||+|++++||
T Consensus 4 VaivG~~nvGK 14 (180)
T d1udxa2 4 VGLVGYPNAGK 14 (180)
T ss_dssp EEEECCGGGCH
T ss_pred EEEECCCCCCH
Confidence 89999999999
No 189
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.70 E-value=6.5 Score=33.34 Aligned_cols=50 Identities=8% Similarity=0.015 Sum_probs=27.7
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHHH----HHHHHHHHhcCCCeEEEEccCchhh
Q 007337 511 IARALMMNPRILLLDEATSALDAESEY----LVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te~----~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
+.+..+++++.++|-= +.=|+++-. ...+.+.....+.-+++|....+..
T Consensus 67 ~~~~~~~~~~~~ilv~--d~~~~~Sf~~~~~~~~~~~~~~~~~~~i~lvgnK~Dl~ 120 (191)
T d2ngra_ 67 LRPLSYPQTDVFLVCF--SVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 (191)
T ss_dssp TGGGGCTTCSEEEEEE--ETTCHHHHHHHHHTHHHHHHHHCTTCCEEEEEECGGGG
T ss_pred hhhhcccccceeeccc--ccchHHHHHHHHHHHHHHHhhcCCCCceEEEecccccc
Confidence 4556678888777622 222333322 2344455554566677887777643
No 190
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.58 E-value=6.5 Score=33.17 Aligned_cols=50 Identities=10% Similarity=0.103 Sum_probs=28.2
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHH----HHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 511 IARALMMNPRILLLDEATSALDAES----EYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~t----e~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
+....+++++.+++ ..+.=|+++ .....+.++....+.-+|+|....+..
T Consensus 73 ~~~~~~~~a~~~il--v~d~t~~~Sf~~~~~~~~~~~~~~~~~~~~ilvgnK~Dl~ 126 (185)
T d2atxa1 73 LRPLSYPMTDVFLI--CFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR 126 (185)
T ss_dssp TGGGGCTTCSEEEE--EEETTCHHHHHHHHHTHHHHHHHHSTTCCEEEEEECTTST
T ss_pred hhhhcccccceeee--ccccchHHHHHHHHHHHHHHHHhcCCCCCeeEeeeccccc
Confidence 34557788877765 222233332 223445555565666778887776643
No 191
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.49 E-value=7.1 Score=32.33 Aligned_cols=14 Identities=43% Similarity=0.715 Sum_probs=12.0
Q ss_pred EEEEEcCCCCcceE
Q 007337 427 KIALVGPSGGGKIS 440 (607)
Q Consensus 427 ~vaiVG~sGsGKi~ 440 (607)
+|.+||.+|+||-+
T Consensus 6 Ki~lvG~~~vGKTs 19 (169)
T d1x1ra1 6 KLVVVGDGGVGKSA 19 (169)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 58899999999933
No 192
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=33.78 E-value=6.7 Score=35.34 Aligned_cols=12 Identities=42% Similarity=0.717 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|+|+|++|+||
T Consensus 34 ~I~LvG~tg~GK 45 (257)
T d1h65a_ 34 TILVMGKGGVGK 45 (257)
T ss_dssp EEEEEESTTSSH
T ss_pred EEEEECCCCCcH
Confidence 599999999999
No 193
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=33.43 E-value=6.1 Score=33.09 Aligned_cols=16 Identities=31% Similarity=0.592 Sum_probs=13.0
Q ss_pred CCCEEEEEcCCCCcce
Q 007337 424 SGSKIALVGPSGGGKI 439 (607)
Q Consensus 424 ~Ge~vaiVG~sGsGKi 439 (607)
+-=+|+++|++|+||-
T Consensus 16 k~~KI~lvG~~~vGKT 31 (182)
T d1moza_ 16 KELRILILGLDGAGKT 31 (182)
T ss_dssp SCEEEEEEEETTSSHH
T ss_pred ceEEEEEECCCCCCHH
Confidence 3346899999999993
No 194
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.39 E-value=49 Score=27.22 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=45.6
Q ss_pred eeC-CCEEEEEcCCCCcceEEEccCCCcccccHHHHhhcCCCCCCCHHHHHHHHHHcCchHHHHhCCccccccccC----
Q 007337 422 LLS-GSKIALVGPSGGGKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGE---- 496 (607)
Q Consensus 422 i~~-Ge~vaiVG~sGsGKi~~V~Q~~~Lf~gTIreNI~~g~~~~~~~~~i~~al~~a~l~~~i~~lp~G~~T~ige---- 496 (607)
.+| |.+|+||-|||. .+.+++..+++. ++++ ||+-.+++
T Consensus 9 ~~P~Gd~I~iiAPS~~----------------------------~~~~~l~~~~~~------L~~~--G~~v~~~~~~~~ 52 (167)
T d1zl0a2 9 WQPIDGRVALIAPASA----------------------------IATDVLEATLRQ------LEVH--GVDYHLGRHVEA 52 (167)
T ss_dssp CCCCCSEEEEECCSBC----------------------------CCHHHHHHHHHH------HHHT--TCCEEECTTTTC
T ss_pred CCCCCCEEEEEeCCCc----------------------------CCHHHHHHHHHH------HHHC--CCEEEECccccc
Confidence 455 899999999942 234556555543 4443 78777764
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCE
Q 007337 497 RGVRLSGGQKQRVAIARALMMNPRI 521 (607)
Q Consensus 497 ~G~~LSGGQkQRialARAll~~~~I 521 (607)
+-..+||--+||.+=--+.+.||+|
T Consensus 53 ~~~~~agtd~~Ra~dL~~a~~dp~i 77 (167)
T d1zl0a2 53 RYRYLAGTVEQRLEDLHNAFDMPDI 77 (167)
T ss_dssp CBTTBSSCHHHHHHHHHHHHHSTTE
T ss_pred ccCcccCCHHHHHHHHHHhccCcCC
Confidence 3356999999999988888888875
No 195
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=33.21 E-value=6 Score=36.04 Aligned_cols=17 Identities=47% Similarity=0.591 Sum_probs=13.2
Q ss_pred CCEEEEEcCCCCcceEE
Q 007337 425 GSKIALVGPSGGGKISI 441 (607)
Q Consensus 425 Ge~vaiVG~sGsGKi~~ 441 (607)
..-+.+||++|+||.++
T Consensus 39 k~n~lLVG~~GvGKTal 55 (268)
T d1r6bx2 39 KNNPLLVGESGVGKTAI 55 (268)
T ss_dssp SCEEEEECCTTSSHHHH
T ss_pred cCCcEEECCCCCcHHHH
Confidence 35678999999999433
No 196
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=33.20 E-value=3.8 Score=33.47 Aligned_cols=12 Identities=33% Similarity=0.689 Sum_probs=11.5
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|+++|++|+||
T Consensus 2 kI~liG~~n~GK 13 (160)
T d1xzpa2 2 RMVIVGKPNVGK 13 (160)
T ss_dssp EEEEECCHHHHT
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 197
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=32.78 E-value=7.9 Score=31.97 Aligned_cols=15 Identities=40% Similarity=0.762 Sum_probs=12.8
Q ss_pred EEEEEcCCCCcceEE
Q 007337 427 KIALVGPSGGGKISI 441 (607)
Q Consensus 427 ~vaiVG~sGsGKi~~ 441 (607)
+|.++|.+|+||-++
T Consensus 6 KivlvG~~~vGKTsl 20 (168)
T d1u8za_ 6 KVIMVGSGGVGKSAL 20 (168)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 799999999999443
No 198
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=32.60 E-value=4.2 Score=37.31 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=18.2
Q ss_pred EEeeCCCEEEEEcCCCCcc
Q 007337 420 LKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 420 l~i~~Ge~vaiVG~sGsGK 438 (607)
++|-+||+++|+|++|+||
T Consensus 62 ~pig~GQr~~Ifg~~g~GK 80 (276)
T d1fx0a3 62 IPVGRGQRELIIGDRQTGK 80 (276)
T ss_dssp SCCBTTCBCBEEESSSSSH
T ss_pred ccccCCceEeeccCCCCCh
Confidence 6889999999999999999
No 199
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=32.41 E-value=7.2 Score=36.34 Aligned_cols=13 Identities=38% Similarity=0.800 Sum_probs=11.3
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
..+.++||+|+||
T Consensus 53 ~~~lf~Gp~GvGK 65 (315)
T d1r6bx3 53 GSFLFAGPTGVGK 65 (315)
T ss_dssp EEEEEECSTTSSH
T ss_pred eEEEEECCCcchh
Confidence 3578999999999
No 200
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=32.40 E-value=7.9 Score=32.10 Aligned_cols=18 Identities=28% Similarity=0.322 Sum_probs=16.4
Q ss_pred EeeCCCEEEEEcCCCCcc
Q 007337 421 KLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 421 ~i~~Ge~vaiVG~sGsGK 438 (607)
..+||..|++.|+-||||
T Consensus 29 ~~~~g~ii~L~G~LGaGK 46 (158)
T d1htwa_ 29 HTEKAIMVYLNGDLGAGK 46 (158)
T ss_dssp CCSSCEEEEEECSTTSSH
T ss_pred cCCCCeEEEEecCCCccH
Confidence 357999999999999999
No 201
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.16 E-value=7.5 Score=33.01 Aligned_cols=12 Identities=58% Similarity=0.913 Sum_probs=11.1
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|+|+|+.|+||
T Consensus 8 KivvvG~~~vGK 19 (194)
T d2bcgy1 8 KLLLIGNSGVGK 19 (194)
T ss_dssp EEEEEESTTSSH
T ss_pred EEEEECCCCcCH
Confidence 389999999999
No 202
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.15 E-value=5.5 Score=35.21 Aligned_cols=16 Identities=38% Similarity=0.582 Sum_probs=14.6
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
-.|+-+.+++|+||||
T Consensus 56 l~g~~~~i~apTGsGK 71 (237)
T d1gkub1 56 LRKESFAATAPTGVGK 71 (237)
T ss_dssp HTTCCEECCCCBTSCS
T ss_pred HCCCCEEEEecCCChH
Confidence 4788899999999999
No 203
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.14 E-value=4.5 Score=37.32 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=19.0
Q ss_pred ceEEeeCCCEEEEEcCCCCcc
Q 007337 418 ITLKLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 418 isl~i~~Ge~vaiVG~sGsGK 438 (607)
.-+++-+||+++|.|++|+||
T Consensus 61 ~l~pig~GQr~~If~~~g~GK 81 (285)
T d2jdia3 61 SLVPIGRGQRELIIGDRQTGK 81 (285)
T ss_dssp HHSCCBTTCBCEEEESTTSSH
T ss_pred cccCccCCCEEEeecCCCCCh
Confidence 336899999999999999999
No 204
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.99 E-value=8.2 Score=32.00 Aligned_cols=54 Identities=11% Similarity=0.150 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHhcCCCEEEE-eccCCCCCHHHHHHHHH---HHHHh--cCCCeEEEEccCchh
Q 007337 503 GGQKQRVAIARALMMNPRILLL-DEATSALDAESEYLVQD---AMDSL--MKGRTVLVIAHRLST 561 (607)
Q Consensus 503 GGQkQRialARAll~~~~IllL-DE~TSaLD~~te~~i~~---~l~~~--~~~~TvI~ItHrl~~ 561 (607)
.||.+- +.+..+++++.+|| =++| |..+-..+.+ .+... ..+..+|+|.+..+.
T Consensus 64 ~g~e~~--~~~~~~~~~~~~ilvfd~t---~~~s~~~~~~~~~~i~~~~~~~~~piilvgnK~Dl 123 (172)
T d2g3ya1 64 KGENEW--LHDHCMQVGDAYLIVYSIT---DRASFEKASELRIQLRRARQTEDIPIILVGNKSDL 123 (172)
T ss_dssp THHHHH--HHHCCCCCCSEEEEEEETT---CHHHHHHHHHHHHHHHTSGGGTTSCEEEEEECTTC
T ss_pred cccccc--cccccccccceeeeeeccc---ccchhhhhhhhhhhhhhccccCCceEEEEeccccc
Confidence 466654 56777888886653 2343 3443333333 23322 135567777776653
No 205
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.77 E-value=8.3 Score=31.86 Aligned_cols=12 Identities=50% Similarity=0.620 Sum_probs=11.0
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.|+|+|.+|+||
T Consensus 7 ~I~iiG~~nvGK 18 (179)
T d1egaa1 7 FIAIVGRPNVGK 18 (179)
T ss_dssp EEEEECSSSSSH
T ss_pred EEEEECCCCCCH
Confidence 388999999999
No 206
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.74 E-value=8.7 Score=33.91 Aligned_cols=52 Identities=6% Similarity=0.091 Sum_probs=26.5
Q ss_pred CCCEEEEeccCCCCC--HHHHHHHHHHHHHhcCCCeEEEEcc-----CchhhhhcCEEEEE
Q 007337 518 NPRILLLDEATSALD--AESEYLVQDAMDSLMKGRTVLVIAH-----RLSTVQSADTVAVV 571 (607)
Q Consensus 518 ~~~IllLDE~TSaLD--~~te~~i~~~l~~~~~~~TvI~ItH-----rl~~l~~aD~Iivl 571 (607)
+..++++||+-.-.. ...-..+.+.... ....+++++. .+..++..++++.+
T Consensus 123 ~~~vi~ide~~~~~~~~~~~~~~~~~~~~~--~~~~ii~i~~~~~~~~~~~l~~~~~~i~f 181 (253)
T d1sxja2 123 KHFVIIMDEVDGMSGGDRGGVGQLAQFCRK--TSTPLILICNERNLPKMRPFDRVCLDIQF 181 (253)
T ss_dssp TSEEEEECSGGGCCTTSTTHHHHHHHHHHH--CSSCEEEEESCTTSSTTGGGTTTSEEEEC
T ss_pred cceEEEeeeccccccchhhhhHHHhhhhcc--cccccccccccccccccccccceeeeeec
Confidence 456888999765432 2233344444333 2334555543 23455555666555
No 207
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.04 E-value=8.7 Score=32.39 Aligned_cols=12 Identities=50% Similarity=0.792 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
++.++|.+|+||
T Consensus 4 KivllG~~~vGK 15 (200)
T d1zcba2 4 KILLLGAGESGK 15 (200)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 208
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=30.95 E-value=9.5 Score=33.70 Aligned_cols=14 Identities=36% Similarity=0.622 Sum_probs=12.5
Q ss_pred CCEEEEEcCCCCcc
Q 007337 425 GSKIALVGPSGGGK 438 (607)
Q Consensus 425 Ge~vaiVG~sGsGK 438 (607)
...+.|+||+|+||
T Consensus 43 ~~~lll~GppGtGK 56 (276)
T d1fnna2 43 YPRATLLGRPGTGK 56 (276)
T ss_dssp CCEEEEECCTTSSH
T ss_pred CCceEEECCCCCCH
Confidence 35789999999999
No 209
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.25 E-value=9.2 Score=31.77 Aligned_cols=12 Identities=58% Similarity=0.924 Sum_probs=11.2
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|+++|..|+||
T Consensus 9 Ki~vvG~~~vGK 20 (177)
T d1x3sa1 9 KILIIGESGVGK 20 (177)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCcCH
Confidence 489999999999
No 210
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.66 E-value=9.4 Score=31.88 Aligned_cols=14 Identities=29% Similarity=0.624 Sum_probs=12.2
Q ss_pred EEEEEcCCCCcceE
Q 007337 427 KIALVGPSGGGKIS 440 (607)
Q Consensus 427 ~vaiVG~sGsGKi~ 440 (607)
+++++|++|+||-+
T Consensus 7 ki~vlG~~~vGKTs 20 (175)
T d2bmja1 7 RLGVLGDARSGKSS 20 (175)
T ss_dssp EEEEECCTTTTHHH
T ss_pred EEEEECCCCCCHHH
Confidence 68999999999933
No 211
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.59 E-value=10 Score=34.34 Aligned_cols=18 Identities=39% Similarity=0.663 Sum_probs=17.1
Q ss_pred EeeCCCEEEEEcCCCCcc
Q 007337 421 KLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 421 ~i~~Ge~vaiVG~sGsGK 438 (607)
-++.|..+-|.|++||||
T Consensus 56 G~~~g~i~e~~G~~~~GK 73 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGK 73 (269)
T ss_dssp SBCSSSEEEEECSSSSSH
T ss_pred CcccceeEEEecCCCcHH
Confidence 478999999999999999
No 212
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=29.37 E-value=8.8 Score=33.48 Aligned_cols=45 Identities=20% Similarity=0.339 Sum_probs=29.4
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 517 MNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 517 ~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
.++.|+++||.= .+-......+...+.........|+++++.+.+
T Consensus 108 ~~~~iilide~d-~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i 152 (231)
T d1iqpa2 108 ASFKIIFLDEAD-ALTQDAQQALRRTMEMFSSNVRFILSCNYSSKI 152 (231)
T ss_dssp CSCEEEEEETGG-GSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGS
T ss_pred CCceEEeehhhh-hcchhHHHHHhhhcccCCcceEEEeccCChhhc
Confidence 367799999973 333344445566666655566778888888654
No 213
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=28.99 E-value=9.7 Score=33.31 Aligned_cols=12 Identities=50% Similarity=0.922 Sum_probs=10.9
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
.+-+.||+|+||
T Consensus 37 ~~L~~GPpGtGK 48 (238)
T d1in4a2 37 HVLLAGPPGLGK 48 (238)
T ss_dssp CEEEESSTTSSH
T ss_pred eEEEECCCCCcH
Confidence 478999999999
No 214
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=28.88 E-value=8.8 Score=36.57 Aligned_cols=11 Identities=64% Similarity=1.283 Sum_probs=9.8
Q ss_pred EEEEcCCCCcc
Q 007337 428 IALVGPSGGGK 438 (607)
Q Consensus 428 vaiVG~sGsGK 438 (607)
+-++||||+||
T Consensus 71 iLfiGPTGvGK 81 (364)
T d1um8a_ 71 ILLIGPTGSGK 81 (364)
T ss_dssp EEEECCTTSSH
T ss_pred eeeeCCCCccH
Confidence 56889999999
No 215
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=27.81 E-value=5.2 Score=34.35 Aligned_cols=16 Identities=38% Similarity=0.704 Sum_probs=14.0
Q ss_pred eCCCEEEEEcCCCCcc
Q 007337 423 LSGSKIALVGPSGGGK 438 (607)
Q Consensus 423 ~~Ge~vaiVG~sGsGK 438 (607)
..|+.+.++.|+||||
T Consensus 38 ~~~~~~il~apTGsGK 53 (202)
T d2p6ra3 38 FSGKNLLLAMPTAAGK 53 (202)
T ss_dssp TTCSCEEEECSSHHHH
T ss_pred HcCCCEEEEcCCCCch
Confidence 3577888999999999
No 216
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=25.84 E-value=14 Score=33.41 Aligned_cols=18 Identities=33% Similarity=0.663 Sum_probs=17.0
Q ss_pred EeeCCCEEEEEcCCCCcc
Q 007337 421 KLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 421 ~i~~Ge~vaiVG~sGsGK 438 (607)
=++.|..+-|.|++||||
T Consensus 53 Gip~g~itei~G~~~sGK 70 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGK 70 (268)
T ss_dssp SEETTSEEEEEESTTSSH
T ss_pred CccCceEEEEecCCccch
Confidence 478999999999999999
No 217
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.59 E-value=11 Score=32.65 Aligned_cols=41 Identities=22% Similarity=0.346 Sum_probs=22.0
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCch
Q 007337 519 PRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLS 560 (607)
Q Consensus 519 ~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~ 560 (607)
.+++++||+-.-- ......+...+......+-.|+++++.+
T Consensus 109 ~~viiiDe~d~l~-~~~~~~l~~~~~~~~~~~~~i~~~~~~~ 149 (237)
T d1sxjd2 109 YKIIILDEADSMT-ADAQSALRRTMETYSGVTRFCLICNYVT 149 (237)
T ss_dssp CEEEEETTGGGSC-HHHHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred ceEEEEecccccC-HHHHHHHhhccccccccccccccccccc
Confidence 4589999975433 3344455555555433334444555543
No 218
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=25.56 E-value=10 Score=31.30 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=12.1
Q ss_pred CEEEEEcCCCCcce
Q 007337 426 SKIALVGPSGGGKI 439 (607)
Q Consensus 426 e~vaiVG~sGsGKi 439 (607)
=+|.++|++|+||-
T Consensus 13 ~kIvlvG~~~vGKT 26 (173)
T d1e0sa_ 13 MRILMLGLDAAGKT 26 (173)
T ss_dssp EEEEEEEETTSSHH
T ss_pred EEEEEECCCCCCHH
Confidence 36899999999993
No 219
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=25.38 E-value=12 Score=32.70 Aligned_cols=13 Identities=38% Similarity=0.432 Sum_probs=11.9
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
.+|||.|.-||||
T Consensus 2 ~iIgiTG~igSGK 14 (241)
T d1deka_ 2 KLIFLSGVKRSGK 14 (241)
T ss_dssp EEEEEECCTTSSH
T ss_pred EEEEEECCCCCCH
Confidence 3799999999999
No 220
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.29 E-value=13 Score=30.95 Aligned_cols=12 Identities=42% Similarity=0.758 Sum_probs=11.4
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
++.++|..|+||
T Consensus 4 KivllG~~~vGK 15 (195)
T d1svsa1 4 KLLLLGAGESGK 15 (195)
T ss_dssp EEEEECSTTSSH
T ss_pred EEEEECCCCCCH
Confidence 689999999999
No 221
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=25.25 E-value=13 Score=35.33 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.9
Q ss_pred EeeCCCEEEEEcCCCCcc
Q 007337 421 KLLSGSKIALVGPSGGGK 438 (607)
Q Consensus 421 ~i~~Ge~vaiVG~sGsGK 438 (607)
.++++..+.++||+|+||
T Consensus 150 ~~~~~~~~~~~g~~~~gk 167 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGK 167 (362)
T ss_dssp CCTTCCEEEEECSTTSSH
T ss_pred CCCCcCeEEEECCCCCCH
Confidence 347788999999999999
No 222
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=24.87 E-value=30 Score=30.06 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=33.3
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 519 PRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 519 ~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
..|+|+||+=. |+.+....+.+.+++...+...|++|++++-+
T Consensus 116 ~kviiIde~d~-l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i 158 (239)
T d1njfa_ 116 FKVYLIDEVHM-LSRHSFNALLKTLEEPPEHVKFLLATTDPQKL 158 (239)
T ss_dssp SEEEEEETGGG-SCHHHHHHHHHHHHSCCTTEEEEEEESCGGGS
T ss_pred CEEEEEECccc-CCHHHHHHHHHHHhcCCCCeEEEEEcCCcccc
Confidence 35999999965 77777777777777655677889999998754
No 223
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=24.82 E-value=11 Score=36.47 Aligned_cols=39 Identities=26% Similarity=0.235 Sum_probs=22.9
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHh-cCCCeEEEEccCchhh
Q 007337 521 ILLLDEATSALDAESEYLVQDAMDSL-MKGRTVLVIAHRLSTV 562 (607)
Q Consensus 521 IllLDE~TSaLD~~te~~i~~~l~~~-~~~~TvI~ItHrl~~l 562 (607)
.+++||+-.-..... +.+.+.+. ..+..+++++..++.+
T Consensus 279 ~l~lDE~~~~~~~~~---l~~~l~~~Rk~Gv~~~l~~Qs~~ql 318 (433)
T d1e9ra_ 279 WLFIDELASLEKLAS---LADALTKGRKAGLRVVAGLQSTSQL 318 (433)
T ss_dssp EEEESCGGGSCBCSS---HHHHHHHCTTTTEEEEEEESCHHHH
T ss_pred EEEechHhhhcccHH---HHHHHHHhCCCCceEEEEeccHHHH
Confidence 567899866544222 22333332 2367888888887665
No 224
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=24.81 E-value=85 Score=24.87 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=45.3
Q ss_pred ccCCCCCCChhHHHHHHHHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccC
Q 007337 494 VGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHR 558 (607)
Q Consensus 494 ige~G~~LSGGQkQRialARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHr 558 (607)
+.|-|...+.++..+-+|.+++-..+..+|+.-+...+++..++ +.. ..+.+++.|+|.
T Consensus 105 lDE~~~~~~~~~~~~~~l~~~l~~~~~~il~~~h~~~~~~~~~~-----i~~-~~~~~i~~v~~~ 163 (178)
T d1ye8a1 105 IDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKE-----IRR-LPGAVLIELTPE 163 (178)
T ss_dssp ECCCSTTGGGCHHHHHHHHHHHTCTTSEEEEECCSSCCSHHHHH-----HHT-CTTCEEEECCTT
T ss_pred ecCCCccchhhHHHHHHHHHHhccCCCEEEEEEccHHHHHhhce-----EEE-EeCCEEEEECCc
Confidence 46767777788888889999988778889999998888765433 333 367888889985
No 225
>d1jqlb_ c.37.1.20 (B:) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=23.37 E-value=41 Score=26.40 Aligned_cols=46 Identities=20% Similarity=0.162 Sum_probs=36.0
Q ss_pred HhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCch
Q 007337 515 LMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLS 560 (607)
Q Consensus 515 ll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~ 560 (607)
|..+.+++++++|....+.+....+.+.+.....+.++|+++++++
T Consensus 73 lF~~krli~i~~~~~~~~k~~~~~L~~~~~~~~~~~~lii~~~~~~ 118 (140)
T d1jqlb_ 73 LFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLS 118 (140)
T ss_dssp TTCCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCC
T ss_pred cccCcEEEEEEcCCCCCcHHHHHHHHHHHhCCCCCEEEEEEcCCCC
Confidence 4578899999999988888777778888877666667777777664
No 226
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.28 E-value=14 Score=31.95 Aligned_cols=13 Identities=31% Similarity=0.682 Sum_probs=11.9
Q ss_pred CEEEEEcCCCCcc
Q 007337 426 SKIALVGPSGGGK 438 (607)
Q Consensus 426 e~vaiVG~sGsGK 438 (607)
-+|.++|.+|+||
T Consensus 7 ~KilllG~~~vGK 19 (221)
T d1azta2 7 HRLLLLGAGESGK 19 (221)
T ss_dssp EEEEEECSTTSSH
T ss_pred CEEEEECCCCCCH
Confidence 3789999999999
No 227
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=23.09 E-value=12 Score=34.74 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=19.6
Q ss_pred HHHHHhcCC-CEEEEeccCCCCCHHHHHHHHHHHHHhcC
Q 007337 511 IARALMMNP-RILLLDEATSALDAESEYLVQDAMDSLMK 548 (607)
Q Consensus 511 lARAll~~~-~IllLDE~TSaLD~~te~~i~~~l~~~~~ 548 (607)
|..++-++| .|++|||.=-+ ++. +++.|.+++.
T Consensus 117 l~~~~~~~p~~Vvl~DEieK~-~~~----v~~~ll~~l~ 150 (315)
T d1qvra3 117 LTEAVRRRPYSVILFDEIEKA-HPD----VFNILLQILD 150 (315)
T ss_dssp HHHHHHHCSSEEEEESSGGGS-CHH----HHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEehHhhc-CHH----HHHHHHHHhc
Confidence 345666666 89999997553 333 4445544443
No 228
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.98 E-value=13 Score=35.75 Aligned_cols=45 Identities=7% Similarity=0.233 Sum_probs=26.6
Q ss_pred HHHHHhcCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 007337 511 IARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRL 559 (607)
Q Consensus 511 lARAll~~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl 559 (607)
+++.-..+.+++|+|-.. .. .+.+..+.+.+++. ++-+++|-...
T Consensus 128 ~~~~~~~~~d~~l~~~~~-~~-~~~d~~l~~~l~~~--~k~~~~V~nK~ 172 (400)
T d1tq4a_ 128 LEKMKFYEYDFFIIISAT-RF-KKNDIDIAKAISMM--KKEFYFVRTKV 172 (400)
T ss_dssp HHHTTGGGCSEEEEEESS-CC-CHHHHHHHHHHHHT--TCEEEEEECCH
T ss_pred HHHhhhhcceEEEEecCC-CC-CHHHHHHHHHHHHc--CCCEEEEEeCc
Confidence 455556678888887432 22 34566666777664 55566654443
No 229
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=22.30 E-value=14 Score=32.18 Aligned_cols=30 Identities=27% Similarity=0.362 Sum_probs=19.8
Q ss_pred HhcCCCEEEEeccCCCCCHHHHHHHHHHHHH
Q 007337 515 LMMNPRILLLDEATSALDAESEYLVQDAMDS 545 (607)
Q Consensus 515 ll~~~~IllLDE~TSaLD~~te~~i~~~l~~ 545 (607)
...+..++++||.=. +....+..+...+..
T Consensus 84 ~~~~~~i~~iDe~~~-~~~~~~~~l~~~~e~ 113 (239)
T d1ixsb2 84 SLEEGDILFIDEIHR-LSRQAEEHLYPAMED 113 (239)
T ss_dssp TCCTTCEEEEETGGG-CCHHHHHHHHHHHHH
T ss_pred hccCCCeeeeecccc-cchhHHHhhhhhhhh
Confidence 345678999999764 456666666666643
No 230
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.23 E-value=16 Score=31.59 Aligned_cols=44 Identities=18% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 007337 518 NPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTV 562 (607)
Q Consensus 518 ~~~IllLDE~TSaLD~~te~~i~~~l~~~~~~~TvI~ItHrl~~l 562 (607)
+..++++||+-.- .......+...+......+..+++++..+.+
T Consensus 101 ~~kviiiDe~d~~-~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i 144 (224)
T d1sxjb2 101 KHKIVILDEADSM-TAGAQQALRRTMELYSNSTRFAFACNQSNKI 144 (224)
T ss_dssp CCEEEEEESGGGS-CHHHHHTTHHHHHHTTTTEEEEEEESCGGGS
T ss_pred ceEEEEEeccccc-chhHHHHHhhhccccccceeeeeccCchhhh
Confidence 3579999998753 4445556666777766667788888887643
No 231
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.30 E-value=17 Score=30.23 Aligned_cols=12 Identities=42% Similarity=0.753 Sum_probs=11.3
Q ss_pred EEEEEcCCCCcc
Q 007337 427 KIALVGPSGGGK 438 (607)
Q Consensus 427 ~vaiVG~sGsGK 438 (607)
+|.++|.+|+||
T Consensus 4 Kiv~lG~~~vGK 15 (200)
T d2bcjq2 4 KLLLLGTGESGK 15 (200)
T ss_dssp EEEEEESTTSSH
T ss_pred EEEEECCCCCCH
Confidence 688999999999
Done!