Your job contains 1 sequence.
>007341
MFSVLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQD
KPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVEL
HRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMV
AALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLP
SSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITSISE
LPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEAHSNKMFGNQSLMS
LNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSFSLGGDYKQPTLHPGHLRDNLSTMALPI
GNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAPCRSNVMFSPLNSAVSINGDVGPLGQCL
DTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYIS
TSVDSLEDLFMSSMVKEVRSYNLAFSSCQNAFINSFYTTLTIIVKNLLNLFNCLLLWFRT
KRRKFSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007341
(607 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 779 1.9e-85 2
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 372 2.1e-58 3
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 498 1.2e-47 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 487 1.8e-46 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 417 4.8e-39 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 373 2.4e-35 2
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 207 2.9e-27 2
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 207 2.9e-27 2
TAIR|locus:2155954 - symbol:APRR4 "pseudo-response regula... 239 2.5e-19 1
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ... 229 3.1e-18 1
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370... 220 2.9e-17 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 196 3.6e-17 2
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species... 218 4.7e-17 1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species... 218 3.4e-16 2
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702... 220 2.5e-15 1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa... 202 1.5e-12 2
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi... 172 5.4e-10 1
TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi... 168 2.0e-09 1
TAIR|locus:2199342 - symbol:APRR6 "pseudo-response regula... 134 2.3e-09 2
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa... 163 3.0e-09 1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ... 166 3.4e-09 1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi... 161 5.3e-09 1
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi... 158 1.8e-08 1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi... 157 2.7e-08 1
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME... 159 2.9e-08 2
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi... 155 4.2e-08 1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species... 156 5.1e-08 1
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi... 148 5.7e-08 1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi... 149 8.1e-08 1
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species... 150 1.3e-07 1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi... 153 1.7e-07 2
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi... 144 8.1e-07 1
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi... 139 1.5e-06 1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species... 146 1.5e-06 2
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW... 140 1.9e-06 1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi... 142 1.9e-06 1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re... 139 3.4e-06 1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species... 136 3.8e-06 1
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702... 137 5.8e-06 1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702... 136 6.6e-06 1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species... 132 6.7e-06 1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi... 136 8.4e-06 1
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ... 132 8.5e-06 1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species... 129 1.5e-05 1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar... 133 1.5e-05 1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37... 131 1.6e-05 1
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species... 133 2.3e-05 2
UNIPROTKB|Q0J235 - symbol:RL9 "Probable transcription fac... 133 2.4e-05 1
TAIR|locus:2125771 - symbol:AT4G04580 "AT4G04580" species... 115 5.9e-05 1
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species... 124 0.00011 1
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi... 121 0.00012 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 123 0.00025 1
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 779 (279.3 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 187/352 (53%), Positives = 227/352 (64%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 63
+LS + DPK VMKG+THGACDYLLKPVRIEELKNIWQHVVR + D K++ +++N DK
Sbjct: 94 MLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR-SRFD-KNRGSNNNGDK-R 150
Query: 64 NGSGQAEGMGNSDQN-GKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWSVELHR 122
+GSG EG+GNSDQN GK N+KRKDQ QKK RVVW+VELH+
Sbjct: 151 DGSGN-EGVGNSDQNNGKGNRKRKDQYNEDEDEDRDDNDDS---CAQKKQRVVWTVELHK 206
Query: 123 KFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAA 182
KFVAAVNQLG +KA+PKKILDLMNVEKLTRENVASHLQK+RLYLKRIS VANQQA M
Sbjct: 207 KFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMA-- 264
Query: 183 LGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNST--FRSFPASGMLGRLNAPAGLGMHGL- 239
+S+ +++M+ ++G + G GQ+ RSFP +G+LGRLN P+G+G+ L
Sbjct: 265 --NSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMRSFPPNGILGRLNTPSGIGVRSLS 322
Query: 240 -PSSGMIPMRHAQNSDNTTNDQGKFHP-ALLPGSHS--GNILQGMPTSLELDQLQLNKNI 295
P +GM QN D GKFH + LP +HS GNILQG+P LE DQLQ N N
Sbjct: 323 SPPAGMF----LQNQ----TDIGKFHHVSSLPLNHSDGGNILQGLPMPLEFDQLQTNNNK 374
Query: 296 TSISELPNTKDNTTFH-VSSGFPDARIGFGRSTNPLLDV-NNNPLFLEGHPQ 345
+ N N + S FP F N L+ NNN + LEGHPQ
Sbjct: 375 SR-----NMNSNKSIAGTSMAFPS----FSTQQNSLISAPNNNVVVLEGHPQ 417
Score = 95 (38.5 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 480 LDT-NKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQ-GS 537
LDT N F R+ +FDS +N V ++ +SSN KEG+++GQQK Q G
Sbjct: 497 LDTTNPRAFCRNTDFDS--NTN-VQPGVFYGPSTDAMALLSSSNPKEGFVVGQQKLQSGG 553
Query: 538 YISTSVDSLEDLFMSSMVKE 557
++ SL+D+ S+M +E
Sbjct: 554 FMVADAGSLDDIVNSTMKQE 573
Score = 55 (24.4 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 45/167 (26%), Positives = 65/167 (38%)
Query: 323 FGRSTNPLLDV-NNNPLFLEGHPQEAHSNKMFGNQXXXXXXXXXXXXXPDHGRCNDNWSS 381
F N L+ NNN + LEGHPQ A G+Q ++WS+
Sbjct: 394 FSTQQNSLISAPNNNVVVLEGHPQ-ATPPGFPGHQINKRL---------------EHWSN 437
Query: 382 AVQSSGIQP----NSFSLGGDYK-QPTLH--PGHLR-DNLSTM-ALPIGNSPCDVSSLHP 432
AV SS P NS S+ + P H P L +N+S+ ++P CD S +
Sbjct: 438 AVSSSTHPPPPAHNSNSINHQFDVSPLPHSRPDPLEWNNVSSSYSIPF----CD--SANT 491
Query: 433 LSNRFQDPKADLQFQAVQDAPCRSNVM----FSPLNSAVSINGDVGP 475
LS+ D F D +NV + P A+++ P
Sbjct: 492 LSSPALDTTNPRAFCRNTDFDSNTNVQPGVFYGPSTDAMALLSSSNP 538
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 372 (136.0 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 114/290 (39%), Positives = 150/290 (51%)
Query: 64 NGSGQAEGMGNSDQNGKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWSVELHRK 123
N S + G GN D K N+KRK+Q PT QKKPRV+W+ ELH K
Sbjct: 141 NKSNVSNGSGNCD---KANRKRKEQYEEEEEEERGNDNDD--PTAQKKPRVLWTHELHNK 195
Query: 124 FVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAAL 183
F+AAV+ LG+++AVPKKILDLMNV+KLTRENVASHLQK+R+ LK++S A QQAN A
Sbjct: 196 FLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQANRAAI- 254
Query: 184 GSSDPSYLRMSSVNGLGNY--HTVG---GPGQFQNST--FRSFPASGMLGRLNAPAGLGM 236
D +++M+S GLG + H G G GQF T R + ++ LGRLN+ G GM
Sbjct: 255 ---DSHFMQMNSQKGLGGFYHHHRGIPVGSGQFHGGTTMMRHYSSNRNLGRLNS-LGAGM 310
Query: 237 HGLPSSGMIPMRHAQNSDNTTN---DQGKFHPALLPGSHSGNILQGMPTSLELDQLQLNK 293
P S P H + ++ + + + S Q P + L L
Sbjct: 311 FQ-PVSSSFPRNHNDGGNILQGLPLEELQINNNINRAFPSFTSQQNSPMVAPSNLLLLEG 369
Query: 294 NITSISELP-NTKDNTTFHVSSGFPDARIGFGRSTN-PLLDVNNNPLFLE 341
N S S LP N + F +S + STN P DV++ P LE
Sbjct: 370 NPQS-SSLPSNPGFSPHFEISKRL-EHWSNAALSTNIPQSDVHSKPDTLE 417
Score = 217 (81.4 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 48/85 (56%), Positives = 58/85 (68%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 63
+LS + DPK VMKG+ HGACDYLLKPVRIEELKNIWQHVVR+ K+ K+++N N
Sbjct: 94 MLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLK-KNKSNVSN----- 147
Query: 64 NGSGQAEGMGNSDQNGKLNKKRKDQ 88
G GN D K N+KRK+Q
Sbjct: 148 -------GSGNCD---KANRKRKEQ 162
Score = 95 (38.5 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 480 LDTNKTFFHRSNEFDSLGQSNFVDHFSMKINE--------VQRSSMQASSNLKEGYLMGQ 531
LDTN R+ F S + + +++N+ V + + SSN EG LMGQ
Sbjct: 433 LDTNPASLCRNTGFGSTNAAQTDFFYPLQMNQQPANNSGPVTEAQLFRSSNPNEGLLMGQ 492
Query: 532 QKTQGSYISTSVDSLEDLFMSSMVKE 557
QK Q +++ SL+D+ S M +E
Sbjct: 493 QKLQSGLMASDAGSLDDIVNSLMTQE 518
Score = 40 (19.1 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 311 HVSSGFPDARIGFGRSTNPLLDVNNNPLFLEGHPQEA 347
+++ FP F N + +N L LEG+PQ +
Sbjct: 342 NINRAFPS----FTSQQNSPMVAPSNLLLLEGNPQSS 374
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 120/305 (39%), Positives = 176/305 (57%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKID----------AKDQ 53
++S + +V+KG+THGA DYL+KPVRIE LKNIWQHVVR+K+ + +D
Sbjct: 105 MMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDT 164
Query: 54 NNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPR 113
++ + H ++ NG+ ++KRK++ ++ KKPR
Sbjct: 165 GGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDS------SSLKKPR 218
Query: 114 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVA 173
VVWSVELH++FVAAVNQLG+DKAVPKKIL++MNV LTRENVASHLQKYR+YL+R+ V+
Sbjct: 219 VVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVS 278
Query: 174 NQQANMVAA-LGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPA 232
Q NM + + D S+ +SS+NG + ++ GQ + A+G LGR P
Sbjct: 279 QHQGNMNHSFMTGQDQSFGPLSSLNGF-DLQSLAVTGQLPPQSLAQLQAAG-LGR---PT 333
Query: 233 GLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTSLELDQLQLN 292
L G+ S ++ R N +N G H + ++GN+L G+PT + +L+
Sbjct: 334 -LAKPGMSVSPLVDQRSIFNFENPKIRFGDGHGQTM---NNGNLLHGVPTGSHM-RLRPG 388
Query: 293 KNITS 297
+N+ S
Sbjct: 389 QNVQS 393
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 126/322 (39%), Positives = 178/322 (55%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKID--AKDQNNS----- 56
++S + +V+KG+THGA DYL+KPVR+E LKNIWQHVVR+++ + + + S
Sbjct: 114 MMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETG 173
Query: 57 DNQDKPHNGSGQAEGMGNS-----DQNGKLN---------KKRKDQXXXXXXXXXXXXXX 102
+ Q + H G G + D + +N +KRKD+
Sbjct: 174 ERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDA- 232
Query: 103 XXXPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKY 162
+ KKPRVVWSVELH++FVAAVNQLG++KAVPKKIL+LMNV LTRENVASHLQKY
Sbjct: 233 ----SNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKY 288
Query: 163 RLYLKRISCVANQQANMVAA-LGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPA 221
R+YL+R+ V+ Q N+ + + D S+ +S++NG + + GQ + A
Sbjct: 289 RIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGF-DLQALAVTGQLPAQSLAQLQA 347
Query: 222 SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN--DQGKFHPALLPGSHSG-NILQ 278
+G LGR PA + GLP S ++ R + DNT +G H P N+L
Sbjct: 348 AG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLH 403
Query: 279 GMPTSLELDQLQLNKNITSISE 300
G+PT L+ QL + N SI +
Sbjct: 404 GVPTGLQ-QQLPMG-NRMSIQQ 423
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 112/280 (40%), Positives = 156/280 (55%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDN-QDKP 62
++S +G VM GI HGACDYL+KP+R EELKNIWQHVVRRK + K+ +S +D
Sbjct: 89 MMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNK 148
Query: 63 HNGSGQAEGMGNSDQNGKL-----NKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWS 117
++GS + + S+ + + NKK+K + P KK RVVWS
Sbjct: 149 NSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLD--PGNSKKSRVVWS 206
Query: 118 VELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQA 177
+ELH++FV AVN+LGIDKAVPK+IL+LMNV L+RENVASHLQK+RLYLKR+S A+Q
Sbjct: 207 IELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSN 266
Query: 178 NM--------VAALGSSDPSYLR-MSSVNG--LGNYHTVGGPGQFQNSTF-RS----FPA 221
+ + AL SS + + ++++ G + N+H+ N RS F
Sbjct: 267 DSESTKRYENIQALVSSGQLHPQTLAALFGQPIDNHHSASFGVWIPNDNLGRSQNEHFSV 326
Query: 222 SGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 261
+ N P + +HGL SS R N++ G
Sbjct: 327 D-VSSASNRPVSVAVHGLSSSANFRQRGDVNNNRIRQGYG 365
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 373 (136.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 84/169 (49%), Positives = 105/169 (62%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 63
++S +G+ VMKG+ HGACDYLLKP+R++ELK IWQHV+R+K + +D +
Sbjct: 88 MMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGAD 147
Query: 64 --NGSGQAEGMGNSDQNGKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWSVELH 121
+A +G + + KKRKD ++ KK RVVWS ELH
Sbjct: 148 WITRYDEAHFLGGGE-DVSFGKKRKD---FDFEKKLLQDESDPSSSSSKKARVVWSFELH 203
Query: 122 RKFVAAVNQLGID-KAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 169
KFV AVNQ+G D KA PKKILDLMNV LTRENVASHLQKYRLYL R+
Sbjct: 204 HKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252
Score = 52 (23.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 433 LSNRFQDPKADLQFQAVQDAPCRSNVMFSPLNSAV--SINGDVGPLGQC----LDTNKTF 486
+ N PK D++ + +P RS+ +FS NS + + D PL L+T+
Sbjct: 265 VKNADSSPK-DVEVNSGYQSPGRSSYVFSGGNSLIQKATEIDPKPLASASLSDLNTDVIM 323
Query: 487 FHRSNE----FDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQK--TQGSYIS 540
++ + FD S+ D + N+V +++ L E + QQ +Q SY++
Sbjct: 324 PPKTKKTRIGFDPPISSSAFDSL-LPWNDVPEV-LESKPVLYENSFLQQQPLPSQSSYVA 381
Query: 541 TSVDSL 546
S SL
Sbjct: 382 NSAPSL 387
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 207 (77.9 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 39/58 (67%), Positives = 48/58 (82%)
Query: 111 KPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255
Score = 165 (63.1 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP 62
+++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP
Sbjct: 88 IMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP 146
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 207 (77.9 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 39/58 (67%), Positives = 48/58 (82%)
Query: 111 KPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHLQKYR+ LK+
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255
Score = 165 (63.1 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP 62
+++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+ R++ D K+ N N +KP
Sbjct: 88 IMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP 146
>TAIR|locus:2155954 [details] [associations]
symbol:APRR4 "pseudo-response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AB016872 IPI:IPI00535768 RefSeq:NP_199735.1
UniGene:At.55447 ProteinModelPortal:Q9FJ16 SMR:Q9FJ16
EnsemblPlants:AT5G49240.1 GeneID:834984 KEGG:ath:AT5G49240
GeneFarm:4344 TAIR:At5g49240 eggNOG:NOG265546 HOGENOM:HOG000029456
InParanoid:Q9FJ16 KO:K14491 OMA:SEIGSEM PhylomeDB:Q9FJ16
ProtClustDB:CLSN2916474 Genevestigator:Q9FJ16 GermOnline:AT5G49240
Uniprot:Q9FJ16
Length = 292
Score = 239 (89.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 55/159 (34%), Positives = 93/159 (58%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKPH 63
++S + K V K + +GA DYL+KP+R E+L+ +++H+V++ + + S +
Sbjct: 119 IISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMR-----ERRSVVTGEAE 173
Query: 64 NGSGQ-AEGMGNSD-QNGKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWSVELH 121
+G+ + +G+S +N +K+ ++ KK RVVW ELH
Sbjct: 174 KAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELH 233
Query: 122 RKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 160
+ F+ AV+ LG+++AVPKKILD+M V+ ++RENVASHLQ
Sbjct: 234 QNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>TAIR|locus:2148348 [details] [associations]
symbol:BOA "AT5G59570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009909 "regulation of flower development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
Length = 298
Score = 229 (85.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 44/69 (63%), Positives = 54/69 (78%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
T K+PR+VW+ +LH++FV V LGI AVPK I+ LMNVE LTRENVASHLQKYRLYLK
Sbjct: 138 TSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLK 197
Query: 168 RISCVANQQ 176
RI + ++
Sbjct: 198 RIQGLTTEE 206
>TAIR|locus:2058445 [details] [associations]
symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
Uniprot:O22210
Length = 248
Score = 220 (82.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+VE LTRENVASHLQKYRLYL+
Sbjct: 102 TLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLR 161
Query: 168 RI 169
R+
Sbjct: 162 RM 163
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 196 (74.1 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 48/137 (35%), Positives = 72/137 (52%)
Query: 40 QHVVRRKKIDAKDQNNSDNQD--KPHNGSGQAEGMGN-----SDQNGKLNKKRKDQXXXX 92
Q + K +D ++ D++ K G + E G S++ ++ +K+
Sbjct: 220 QDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKP 279
Query: 93 XXXXXXXXXXXXXPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTR 152
T++KK V W+ ELH+KFV AV QLG+D+A+P +IL+LM V LTR
Sbjct: 280 INKSSGIKNVSGNKTSRKK--VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTR 337
Query: 153 ENVASHLQKYRLYLKRI 169
NVASHLQK+R + K I
Sbjct: 338 HNVASHLQKFRQHRKNI 354
Score = 92 (37.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 15 MKGITHGACDYLLKPVRIEELKNIWQHVVRR 45
MK I GA ++L KP+ E+LKNIWQHVV +
Sbjct: 111 MKCIALGAVEFLQKPLSPEKLKNIWQHVVHK 141
>TAIR|locus:2175364 [details] [associations]
symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
Uniprot:Q9FF65
Length = 266
Score = 218 (81.8 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYRLYLK
Sbjct: 78 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLK 137
Query: 168 RI 169
R+
Sbjct: 138 RM 139
>TAIR|locus:2103247 [details] [associations]
symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
Length = 335
Score = 218 (81.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
T K+PR+VW+ +LH++FV AV LGI AVPK I+ LM+V+ LTRENVASHLQKYRLYLK
Sbjct: 102 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLK 161
Query: 168 RI 169
R+
Sbjct: 162 RM 163
Score = 44 (20.5 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 208 PGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPAL 267
P QF + S G ++P G G P+S TTN GKF P+
Sbjct: 235 PPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGF-------GSPTTN--GKFDPSF 285
Query: 268 L 268
L
Sbjct: 286 L 286
>TAIR|locus:2167639 [details] [associations]
symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
Uniprot:Q9FFH0
Length = 386
Score = 220 (82.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 109 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
+KKP+V W+ ELHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 169 I 169
+
Sbjct: 205 L 205
>UNIPROTKB|Q5Z5I4 [details] [associations]
symbol:GLK1 "Probable transcription factor GLK1"
species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
regulation of organelle organization" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
Length = 455
Score = 202 (76.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/61 (60%), Positives = 49/61 (80%)
Query: 109 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
+KK +V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K
Sbjct: 178 KKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 237
Query: 169 I 169
+
Sbjct: 238 M 238
Score = 38 (18.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 186 SDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAP 231
SDP++ + G + T G P FPA + G + P
Sbjct: 335 SDPAFWHHPYMRGPAHVPTQGTPCMAMPMPAARFPAPPVPGVVPCP 380
>TAIR|locus:2085984 [details] [associations]
symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
Length = 357
Score = 172 (65.6 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 46/127 (36%), Positives = 65/127 (51%)
Query: 109 QKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
Q+K R WS ELHR+F+ A+ QLG A PK+I D+M V+ LT + V SHLQKYRL+ +
Sbjct: 194 QRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQKYRLHAR 253
Query: 168 RISCVA----NQQANMVAALGS---SDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRSFP 220
R S N Q +G ++ ++VN + + T G G +S +P
Sbjct: 254 RPSQTTPNNRNSQTQHFVVVGGIWVPQTNHSTANAVNAVASGETTGIYGPMVSSLPSEWP 313
Query: 221 ASGMLGR 227
GR
Sbjct: 314 RHSNFGR 320
>TAIR|locus:2095933 [details] [associations]
symbol:MYR2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
Length = 394
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 165
+T KPR+ W+ +LH +F+ AVNQLG DKA PK I+ +M + LT ++ SHLQKYRL
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLS 100
Query: 166 LKRISCVANQQANMVAAL 183
K ++ AN N + +
Sbjct: 101 -KNLNGQANNSFNKIGIM 117
>TAIR|locus:2199342 [details] [associations]
symbol:APRR6 "pseudo-response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC016447 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557 KO:K14491
IPI:IPI00522591 IPI:IPI01020037 PIR:E96705 RefSeq:NP_176988.4
UniGene:At.52431 ProteinModelPortal:Q9C9F6 SMR:Q9C9F6 PaxDb:Q9C9F6
PRIDE:Q9C9F6 GeneID:843150 KEGG:ath:AT1G68210 GeneFarm:4346
TAIR:At1g68210 eggNOG:NOG320519 OMA:IANIEMP Genevestigator:Q9C9F6
Uniprot:Q9C9F6
Length = 755
Score = 134 (52.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 115 VWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 170
+W+ E H KF+AA++ LG + PK IL++MN LT V SHLQKY+ + +IS
Sbjct: 226 LWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQIDQIS 281
Score = 87 (35.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 18 ITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQD 60
+T AC L KP+ +++KN+WQHV +K + K N +++Q+
Sbjct: 103 LTKRACFSLDKPISNDDIKNMWQHVFSKKSQELKKINITEDQE 145
>TAIR|locus:2119425 [details] [associations]
symbol:UNE16 "unfertilized embryo sac 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009567 "double fertilization forming a
zygote and endosperm" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
Length = 295
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/100 (45%), Positives = 57/100 (57%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL- 164
TT KPR+ W+ ELH +FV AV QLG DKA PK I+ M V+ LT ++ SHLQK+RL
Sbjct: 33 TTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLG 92
Query: 165 ---------YLKRISCVANQQANMVAALGSSDPSYLRMSS 195
K +SCVA Q GSS S LR+++
Sbjct: 93 RQSCKESIDNSKDVSCVAESQDT-----GSSSTSSLRLAA 127
>TAIR|locus:2172394 [details] [associations]
symbol:MYR1 "myb-related protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
Uniprot:Q9FK47
Length = 402
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLGI-DKAVPKKILDLMNVEKLTRENVASHLQKYRLY 165
+T KPR+ W+ +LH +FV AVNQLG DKA PK I+ +M + LT ++ SHLQKYRL
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLS 100
Query: 166 LKRISCVANQQANMVAAL 183
K ++ AN N + +
Sbjct: 101 -KNLNGQANSSLNKTSVM 117
>TAIR|locus:2093726 [details] [associations]
symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
Length = 298
Score = 161 (61.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 42/94 (44%), Positives = 57/94 (60%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLY 165
TT KPR+ W+ ELH +FV AV QLG DKA PK I+ M V+ LT ++ SHLQK+RL
Sbjct: 37 TTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLG 96
Query: 166 LK--RISCVANQQANMVAA---LGSSDPSYLRMS 194
+ + S ++ A+ V GSS S +RM+
Sbjct: 97 RQAGKESTENSKDASCVGESQDTGSSSTSSMRMA 130
>TAIR|locus:2031210 [details] [associations]
symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
Uniprot:Q9FPE8
Length = 344
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYL 166
+ +K R WS ELHR+F+ A+ QLG A PK+I DLM V+ LT + V SHLQKYRL+
Sbjct: 206 SNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHT 265
Query: 167 KR 168
+R
Sbjct: 266 RR 267
>TAIR|locus:2115070 [details] [associations]
symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
Length = 363
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 109 QKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLK 167
+K+ R WS ELHRKFV A+++LG + A PK+I DLM V+ LT + V SHLQKYR++++
Sbjct: 215 KKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIR 274
Query: 168 R 168
+
Sbjct: 275 K 275
>TAIR|locus:2206415 [details] [associations]
symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
Length = 358
Score = 159 (61.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
TT KPR+ W+VELH +FV AV QLG DKA PK I+ +M V+ LT ++ SHLQK+RL
Sbjct: 30 TTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
Score = 39 (18.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 513 QRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLF 550
Q + A+ ++ + + + Q +++ST +DSL +++
Sbjct: 276 QDHDLSANQSIDDEHRI--QIQMATHVSTDLDSLSEIY 311
>TAIR|locus:2026863 [details] [associations]
symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
Genevestigator:Q8VZS3 Uniprot:Q8VZS3
Length = 354
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYL 166
T +K R WS ELHR+F+ A+ QLG A PK+I D M V+ LT + V SHLQKYRL+
Sbjct: 212 THRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHT 271
Query: 167 KR 168
+R
Sbjct: 272 RR 273
>TAIR|locus:2063746 [details] [associations]
symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
Length = 432
Score = 156 (60.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 41/109 (37%), Positives = 54/109 (49%)
Query: 64 NGS-GQAEGMGNSDQNGKLNKKRKDQXXXXXXXXXXXXXXXXXPTTQKKPRVVWSVELHR 122
NG G E M N+D N N + +K R WS +LHR
Sbjct: 194 NGQDGNDESMINNDNNYNNNNNNNSNSNGVSSTTSQ---------SNRKARRCWSPDLHR 244
Query: 123 KFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLKRIS 170
+FV A+ LG + A PK+I +LM V+ LT + V SHLQKYRL+ +R S
Sbjct: 245 RFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPS 293
>TAIR|locus:2087740 [details] [associations]
symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
Length = 235
Score = 148 (57.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
TT KPR+ W+ ELH +FV AV LG +KA PK I+ +M V+ LT ++ SHLQK+RL
Sbjct: 19 TTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 77
>TAIR|locus:2157146 [details] [associations]
symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
Length = 264
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
T KPR+ W+ +LH +FV AV +LG DKA PK +L LM ++ LT ++ SHLQKYRL
Sbjct: 3 TRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYRL 61
>TAIR|locus:2010297 [details] [associations]
symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
Genevestigator:Q9FX84 Uniprot:Q9FX84
Length = 333
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 110 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
+K R W+ ELHR+FV A+ QLG A PK+I + M E LT + V SHLQKYRL++++
Sbjct: 191 RKQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHMQEEGLTNDEVKSHLQKYRLHIRK 250
Query: 169 ISCVANQQANMV 180
+ A +Q+ +V
Sbjct: 251 PNSNAEKQSAVV 262
>TAIR|locus:2026739 [details] [associations]
symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
Genevestigator:A8MSE5 Uniprot:A8MSE5
Length = 337
Score = 153 (58.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
+T KPR+ W+ +LH KF+ AVNQLG +KA PK ++ +M + LT ++ SHLQKYRL
Sbjct: 30 STDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRL 88
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 511 EVQRS---SMQASSNLKEGYLMGQQKTQGSYISTSV 543
EVQR ++A + LM Q+T Y S+++
Sbjct: 158 EVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNL 193
>TAIR|locus:2170199 [details] [associations]
symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
Length = 375
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 31/60 (51%), Positives = 39/60 (65%)
Query: 106 PTTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
P K R+ W+ +LH KFV VN+LG DKA PK IL M+ + LT +V SHLQKYR+
Sbjct: 187 PNCVNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRI 246
>TAIR|locus:2045761 [details] [associations]
symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
Uniprot:Q9SJW0
Length = 286
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 111 KPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
K R+ W+ ELH +FV AV QLG D+A PK +L +M V+ LT +V SHLQKYRL
Sbjct: 15 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 69
>TAIR|locus:2063141 [details] [associations]
symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
Length = 410
Score = 146 (56.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/118 (32%), Positives = 55/118 (46%)
Query: 47 KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQXXXXXXXXXXXXXXXXXP 106
K K++ + D +D + E G DQ+ N ++
Sbjct: 20 KATTKNEEDKDEEDDEEGEEDEEERSG--DQSPSSNSYEEESGSHHHDQNKKNGGSVRPY 77
Query: 107 TTQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K PR+ W+ ELH F+ AV +LG D+A PK +L LMNV+ L+ +V SHLQ YR
Sbjct: 78 NRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYR 135
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 481 DTNKTFFHRSNEFDSLGQSNFVDHFSMKINEVQRSSMQASSNLKEGYLMGQQKTQGSYIS 540
D NKT R N + + +N V + + + RS ++ + + GQ + S
Sbjct: 231 DKNKTISFRINSHEGVHDNNGV---AGAVPRIHRSFLEGMKTFNKSW--GQSLSSNLKSS 285
Query: 541 TS 542
T+
Sbjct: 286 TA 287
>TAIR|locus:2205339 [details] [associations]
symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
ROOT SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
phosphate starvation" evidence=IMP] [GO:0080022 "primary root
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
Uniprot:Q9FX67
Length = 344
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 110 KKPRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
+K R WS +LHR+F+ A+ LG A PK+I + M V+ LT + V SHLQKYRL+ +R
Sbjct: 180 RKQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRR 239
>TAIR|locus:2089260 [details] [associations]
symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
Uniprot:Q949U2
Length = 449
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 110 KKPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 164
+K R+ W+ ELH FV AV +L G +KA PK + LMNVE LT +V SHLQKYRL
Sbjct: 240 QKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQKYRL 295
>TAIR|locus:2139865 [details] [associations]
symbol:PHR1 "phosphate starvation response 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
response to high light intensity" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
GO:GO:0055063 Uniprot:Q94CL7
Length = 409
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 111 KPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K R+ W+ ELH FV AVN LG ++A PK +L +M VE LT +V SHLQKYR
Sbjct: 225 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYR 278
>TAIR|locus:2051572 [details] [associations]
symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
Uniprot:Q9ZPZ8
Length = 301
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 38/123 (30%), Positives = 56/123 (45%)
Query: 78 NGKLNKKRKDQXXXXXXXXXXXXXXXXXP----TTQKKPRVVWSVELHRKFVAAVNQLG- 132
N KL K K+ P T+ +K R+ WS +LH FV AV +LG
Sbjct: 49 NEKLEKNTKENAEKVGIEEGNGSSSKITPCIFYTSDEKARLRWSSDLHDCFVNAVEKLGG 108
Query: 133 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSSDPSYLR 192
+KA PK + + M VE + +V SHLQK+RL I NQ ++ L+
Sbjct: 109 PNKATPKSVKEAMEVEGIALHHVKSHLQKFRLGKCNIRGGTNQYVRQSQSMPHKSQQQLQ 168
Query: 193 MSS 195
+++
Sbjct: 169 LNN 171
>TAIR|locus:2148720 [details] [associations]
symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
Uniprot:Q8GUN5
Length = 413
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 111 KPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K R+ W+ ELH FV AVNQLG ++A PK +L L+N LT +V SHLQKYR
Sbjct: 231 KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYR 284
>TAIR|locus:2028346 [details] [associations]
symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
development" evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
Uniprot:Q9C616
Length = 388
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYL 166
+ + PR+ W+ LH +FV AV LG ++A PK +L+LM+V+ LT +V SHLQ YR
Sbjct: 210 SMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
Query: 167 KRISCVANQQANMVAALGSS 186
A+ + V GSS
Sbjct: 270 TTDKAAASSGQSDVYENGSS 289
>TAIR|locus:2204518 [details] [associations]
symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
Genevestigator:Q700D9 Uniprot:Q700D9
Length = 255
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 112 PRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTRENVASHLQKYR 163
PR+ W+ ELHR FV AV+ LG KA PK +L +M+V+ LT +V SHLQ YR
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
>TAIR|locus:2100880 [details] [associations]
symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
OMA:WPDWADQ Uniprot:F4J3P7
Length = 442
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 111 KPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K R+ W+ ELH FV A+NQLG ++A PK +L L+N LT +V SHLQKYR
Sbjct: 238 KQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYR 291
>TAIR|locus:2163852 [details] [associations]
symbol:ATS "AT5G42630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048481 "ovule development" evidence=IMP] [GO:0080060
"integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
Uniprot:Q9FJV5
Length = 276
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 110 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
+ PR+ W+ LH FV AV LG ++A PK +L+LMNV+ LT +V SHLQ YR
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>TAIR|locus:2041539 [details] [associations]
symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
Length = 255
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 112 PRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
PR+ W+ +LH FV AV +LG D+A PK +L++MN++ L+ +V SHLQ YR
Sbjct: 51 PRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYR 103
>TAIR|locus:2171427 [details] [associations]
symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
"xylem and phloem pattern formation" evidence=IMP] [GO:0010158
"abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
development" evidence=IGI] [GO:0048481 "ovule development"
evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
axis specification" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
Length = 403
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 106 PT--TQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKY 162
PT + + PR+ W+ LH +FV AV LG ++A PK +L+LM+V+ LT +V SHLQ Y
Sbjct: 212 PTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 271
Query: 163 R 163
R
Sbjct: 272 R 272
>TAIR|locus:505006489 [details] [associations]
symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
Length = 322
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/93 (36%), Positives = 47/93 (50%)
Query: 110 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 168
+ PR+ W+ LH FV AV LG ++A PK +L+LM+V+ LT +V SHLQ YR +K
Sbjct: 163 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRT-IKS 221
Query: 169 ISCVANQQANMVAALGSSDPSYLRMSSVNGLGN 201
GS S ++ GL N
Sbjct: 222 TEKPTTSSGQSDCENGSQVNSEREARNLTGLWN 254
>TAIR|locus:2038957 [details] [associations]
symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
Length = 397
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 111 KPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K R+ W+ ELH FV AVNQLG ++A PK +L M VE LT +V SHLQKYR
Sbjct: 231 KGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEGLTIFHVKSHLQKYR 284
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 43 VRRKKIDAKDQNNSDNQDKPHNGSGQAEG 71
V + +D +NS+N +N + A+G
Sbjct: 204 VELRPLDRTVSSNSNNNSNSNNAAAAAKG 232
>UNIPROTKB|Q0J235 [details] [associations]
symbol:RL9 "Probable transcription factor RL9"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] [GO:0010158 "abaxial cell fate specification"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AP008215 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0010229
eggNOG:NOG330873 HOGENOM:HOG000241649 EMBL:AP005904 EMBL:FJ268747
EMBL:FJ268748 RefSeq:NP_001063097.1 UniGene:Os.5597 PRIDE:Q0J235
GeneID:4346973 KEGG:osa:4346973 Gramene:Q0J235 OMA:DALPWRH
ProtClustDB:CLSN2697690 Uniprot:Q0J235
Length = 532
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 57/216 (26%), Positives = 95/216 (43%)
Query: 108 TQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYL 166
+ + PR+ W+ LH +FV AV LG ++A PK +L+LM+V+ LT +V SHLQ YR
Sbjct: 321 SMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 380
Query: 167 KRISCVANQQANMVAALGSSDPSYLRMS-SVNGLGNYHTV--GGPGQFQNSTFRSFPASG 223
A+ A GS D + + +G G+ + GG G + F S
Sbjct: 381 STDKPAASSGP---ADGGSGDEEFAGGGQAASGGGDSMCLRGGGGGGVAAAAFAEHGRSA 437
Query: 224 MLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHSGNILQGMPTS 283
G ++ G G G + A N+ T P L S + + + + S
Sbjct: 438 SEGAASSVGGGG------GGDMDQSSAGNTSTTRWSNSSRDPWLSSNSCNMDAHRSVGLS 491
Query: 284 LELDQLQLNKNITSISELPNTK-DNTTFHVSSGFPD 318
++ L+ ++ S S++ N + + + + G PD
Sbjct: 492 SPIENLEPCRS--SSSQVSNHELSSPSLEFTLGRPD 525
>TAIR|locus:2125771 [details] [associations]
symbol:AT4G04580 "AT4G04580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AL161501 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AF074021 IPI:IPI00541303 PIR:G85057
RefSeq:NP_192367.1 UniGene:At.54143 ProteinModelPortal:Q9XEB2
SMR:Q9XEB2 EnsemblPlants:AT4G04580.1 GeneID:825790
KEGG:ath:AT4G04580 TAIR:At4g04580 eggNOG:NOG300503
HOGENOM:HOG000153846 InParanoid:Q9XEB2 OMA:RDLTISH PhylomeDB:Q9XEB2
ProtClustDB:CLSN2915807 ArrayExpress:Q9XEB2 Genevestigator:Q9XEB2
Uniprot:Q9XEB2
Length = 166
Score = 115 (45.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 112 PRVVWSVELHRKFVAAVNQLGIDK-AVPKKILDLMNVEKLTRENVASHLQKYR 163
PR+ W+ +L +F+ + +LG ++ A PK+IL LM V LT +V SHLQ YR
Sbjct: 15 PRMHWTDDLDIRFIQVIEKLGGEESATPKRILSLMGVRDLTISHVKSHLQMYR 67
>TAIR|locus:2042927 [details] [associations]
symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
Length = 340
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 110 KKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLMNVEKLTRENVASHLQKYR 163
K PR+ W+ +LH +FV AV +LG ++A PK + +MN++ L+ +V SHLQ YR
Sbjct: 53 KVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYR 107
>TAIR|locus:2041145 [details] [associations]
symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
Genevestigator:Q7X887 Uniprot:Q7X887
Length = 256
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 112 PRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTRENVASHLQKYR 163
PR+ W+ +LHR FV AV LG +A PK +L +M+V+ LT +V SHLQ YR
Sbjct: 30 PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMYR 82
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 4 VLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKIDAKDQNNSDNQDKP- 62
++S K+V+K + GA DYL+KP+R ELKN+WQHV RR + +D + Q P
Sbjct: 117 MMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR--LTLRDDPTAHAQSLPA 174
Query: 63 --HN 64
HN
Sbjct: 175 SQHN 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 607 566 0.00079 120 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 615 (65 KB)
Total size of DFA: 316 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.74u 0.10s 53.84t Elapsed: 00:00:05
Total cpu time: 53.75u 0.10s 53.85t Elapsed: 00:00:05
Start: Mon May 20 20:20:43 2013 End: Mon May 20 20:20:48 2013