AmiGO: BLAST Results


BLAST match view associations BLAST with PAPS1 PAPS1 PAPS1 poly(A) polymerase 1	protein from Arabidopsis thaliana	2.3e-174
BLAST match view associations BLAST with nPAP nPAP nPAP nuclear poly(a) polymerase	protein from Arabidopsis thaliana	4.3e-141
BLAST match view associations BLAST with PAPS2 PAPS2 PAPS2 poly(A) polymerase 2	protein from Arabidopsis thaliana	6.3e-140
BLAST match view associations BLAST with papA papA papA poly(A) polymerase	gene from Dictyostelium discoideum	8.3e-90
BLAST match view associations BLAST with papolg papolg papolg poly(A) polymerase gamma	gene_product from Danio rerio	2.9e-87
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	8.1e-87
BLAST match view associations BLAST with papola papola papola poly(A) polymerase alpha	gene_product from Danio rerio	2.4e-85
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	gene from Rattus norvegicus	1.7e-84
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG PAPOLG protein	protein from Bos taurus	5.0e-83
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Sus scrofa	1.3e-82
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	protein from Mus musculus	1.7e-82
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	protein from Mus musculus	2.2e-82
BLAST match view associations BLAST with hrg hrg hrg hiiragi	protein from Drosophila melanogaster	4.5e-82
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	7.4e-82
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Uncharacterized protein	protein from Sus scrofa	2.0e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.5e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.5e-81
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	protein from Mus musculus	2.5e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Canis lupus familiaris	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Poly(A) polymerase beta	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	5.2e-81
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	gene from Rattus norvegicus	2.0e-79
BLAST match view associations BLAST with F1NL95 F1NL95 F1NL95 Uncharacterized protein	protein from Gallus gallus	3.0e-78
BLAST match view associations BLAST with F1P3A1 F1P3A1 F1P3A1 Uncharacterized protein	protein from Gallus gallus	3.0e-78
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6	gene from Caenorhabditis elegans	2.7e-75
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6 Protein T15H9.6	protein from Caenorhabditis elegans	2.7e-75
BLAST match view associations BLAST with F43G6.5 F43G6.5 F43G6.5	gene from Caenorhabditis elegans	5.7e-75
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w poly(A) polymerase PAP, putative	gene from Plasmodium falciparum	2.0e-71
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w Poly(A) polymerase PAP, putative	protein from Plasmodium falciparum 3D7	2.0e-71
BLAST match view associations BLAST with PAP1 PAP1 PAP1	gene_product from Candida albicans	4.2e-71
BLAST match view associations BLAST with PAPA PAPA PAPA Poly(A) polymerase PAPa	protein from Candida albicans SC5314	4.2e-71
BLAST match view associations BLAST with pap-1 pap-1 pap-1	gene from Caenorhabditis elegans	4.8e-71
BLAST match view associations BLAST with pap-1 pap-1 pap-1 Protein PAP-1	protein from Caenorhabditis elegans	4.8e-71
BLAST match view associations BLAST with PAP1 PAP1 PAP1 Poly(A) polymerase, one of three factors required for mRNA 3'-end pol	gene from Saccharomyces cerevisiae	8.0e-69
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	gene from Rattus norvegicus	4.2e-59
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	6.3e-53
BLAST match view associations BLAST with PAPS3 PAPS3 PAPS3 AT3G06560	protein from Arabidopsis thaliana	1.2e-49
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	7.3e-43
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	4.6e-41
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with MGG_06121 MGG_06121 MGG_06121 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.0e-10
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	2.4e-10
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007342
        (607 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ...  1694  2.3e-174  1
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer...  1380  4.3e-141  1
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ...  1369  6.3e-140  1
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"...   896  8.3e-90   1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme...   872  2.9e-87   1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm...   827  8.1e-87   2
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme...   830  2.4e-85   2
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp...   826  1.7e-84   2
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein...   832  5.0e-83   1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein...   828  1.3e-82   1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma...   827  1.7e-82   1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta...   802  2.2e-82   2
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso...   780  4.5e-82   2
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein...   821  7.4e-82   1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein...   817  2.0e-81   1
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein...   816  2.5e-81   1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein...   816  2.5e-81   1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha...   816  2.5e-81   1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph...   813  5.2e-81   1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph...   813  5.2e-81   1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph...   813  5.2e-81   1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein...   813  5.2e-81   1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph...   813  5.2e-81   1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph...   813  5.2e-81   1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta...   813  5.2e-81   1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein...   813  5.2e-81   1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein...   813  5.2e-81   1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te...   798  2.0e-79   1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein...   787  3.0e-78   1
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein...   787  3.0e-78   1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha...   759  2.7e-75   1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci...   759  2.7e-75   1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha...   756  5.7e-75   1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1...   739  3.6e-73   1
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po...   566  2.0e-71   2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA...   566  2.0e-71   2
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica...   701  4.2e-71   2
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ...   701  4.2e-71   2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd...   719  4.8e-71   1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6...   719  4.8e-71   1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ...   698  8.0e-69   1
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s...   548  4.2e-59   2
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph...   548  6.3e-53   1
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species...   464  3.7e-50   2
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ...   517  1.2e-49   1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph...   453  7.3e-43   1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm...   436  4.6e-41   1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm...   177  2.4e-12   2
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot...   187  1.0e-10   1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein...   176  2.4e-10   1


>TAIR|locus:2030943 [details] [associations]
            symbol:PAPS1 "poly(A) polymerase 1" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
            polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
            EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
            PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
            IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
            EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
            TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
            ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
        Length = 713

 Score = 1694 (601.4 bits), Expect = 2.3e-174, P = 2.3e-174
 Identities = 315/391 (80%), Positives = 344/391 (87%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct:   128 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 187

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct:   188 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 247

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct:   248 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 307

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYPCMNSSYNVS STLRIM  EFQRG+EICEAME N+AD  WDTLFEPF FFEAYKN
Sbjct:   308 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKAD--WDTLFEPFAFFEAYKN 365

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
             YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct:   366 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 424

Query:   301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
             FMGLQRKQGVP  EGEQFDIR TV+EFK  V+ YTL  PGM+ISV H+ RR+LPNFVFPG
Sbjct:   425 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 484

Query:   361 GVRPSRPSKGTWDS-RRALERKVSSHTKPGA 390
             GVRPS  SKGTWDS RR+  R  S+ + P A
Sbjct:   485 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAA 515


>TAIR|locus:2134113 [details] [associations]
            symbol:nPAP "nuclear poly(a) polymerase" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
            "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
            evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
            process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0016192 "vesicle-mediated transport" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
            RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
            SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
            KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
        Length = 765

 Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
 Identities = 273/476 (57%), Positives = 332/476 (69%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS  S+L   DE
Sbjct:   138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
              TVRSLNGCRV DQIL+LVP  ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct:   198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             +CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE  LG  VWD R+N +D+YHLMPI
Sbjct:   258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+    W +LFE + FFEAYKN
Sbjct:   318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQH--WSSLFEQYMFFEAYKN 375

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
             YL++DI A +A+DL  WKGWVESR RQLTLKIER T  ML CHP P ++ D ++  L+C+
Sbjct:   376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435

Query:   300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +FMGLQR +GV   E +QFDIR TV EF+Q V+MY   KPGM + V+HV RR LP FVFP
Sbjct:   436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495

Query:   360 GGVRPSRPSKG-TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
              G R  R S+       ++ E    SH+    +   KRK   + +D      +  A++  
Sbjct:   496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555

Query:   419 SSGEF--REGXXXXXXXXXXXXNLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
              S +    E             NL+    +  E    N E  E  LTD  R   NS
Sbjct:   556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609


>TAIR|locus:2043560 [details] [associations]
            symbol:PAPS2 "poly(A) polymerase 2" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
            GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
            EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
            PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
            IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
            KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
            ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
            Uniprot:O82312
        Length = 800

 Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
 Identities = 264/432 (61%), Positives = 321/432 (74%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS  S+L + DE
Sbjct:   140 ILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 199

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             QTVRSLNGCRV DQIL+LVP  ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct:   200 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 259

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             +CQ YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE  L   VWDPR+N +D+YHLMPI
Sbjct:   260 LCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPI 319

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+    W +LF+ + FFEAYKN
Sbjct:   320 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQH--WSSLFQQYMFFEAYKN 377

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
             YL++D+ A +A+DL  WKGWVESR RQLTLKIER T  ML CHP P ++ D SK   +C+
Sbjct:   378 YLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCA 437

Query:   300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +FMGLQR  G    E +QFDIR TV EF+Q V+MY   +PGM + V+HV RR LP+FVFP
Sbjct:   438 FFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFP 497

Query:   360 GGVRPSRPSKG-TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHL----RNAKC-- 412
              G + SR S+  +   R   +  V S      +   KRK  D+ +++      + A C  
Sbjct:   498 NGYKRSRQSRHQSQQCREPGDEGVGS-LSDSVERYAKRKNDDEIMNSRPEKREKRASCSL 556

Query:   413 H---ATMPSSSG 421
             H   A  P SSG
Sbjct:   557 HTLDAASPDSSG 568


>DICTYBASE|DDB_G0288259 [details] [associations]
            symbol:papA "poly(A) polymerase" species:44689
            "Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
            evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
            specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
            GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
            EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
            RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
            EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
            OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
        Length = 809

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 194/421 (46%), Positives = 256/421 (60%)

Query:     6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVR 64
             PE+TE   V DA VPV+   FSG+ IDL+YA+L+L  IPE+L D+  +S L+N DE+++ 
Sbjct:   174 PEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSIL 233

Query:    65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
             SLNGCRVTDQIL+LVP I NFR  LRC++ WA RRG+YSN+ GFLGG++WALL ARICQL
Sbjct:   234 SLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQL 293

Query:   125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITP 183
             YPN+ PS ++ RFF+VY  W+WP P+LLC I+EG  LG +VW+P+R   DK HLMPIITP
Sbjct:   294 YPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITP 350

Query:   184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
             AYP MNS+YNVS STL++M  EF RG EI   +E  E    W  L E   FF  Y  Y+ 
Sbjct:   351 AYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECT--WKNLLEKCDFFTRYSFYIE 408

Query:   244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP--LY 297
             ID  + N +D R W+GW+ES+LR L   +E  T  M    P+P  F++     + P  + 
Sbjct:   409 IDCYSMNEEDSRKWEGWIESKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQIC 467

Query:   298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLP 354
              S+FMGL        G  +  D+   V EF   +  +   +P    M I V ++ ++ LP
Sbjct:   468 TSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLP 527

Query:   355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
              FV   G  P  P K T        +K SS  +P A    ++K   +N D  L + K   
Sbjct:   528 AFVKDEG--PEEPVKTT--------KKRSSTGEPSAT---RKKLKSENSDNKLNSPKSPI 574

Query:   415 T 415
             T
Sbjct:   575 T 575


>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
            symbol:papolg "poly(A) polymerase gamma"
            species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
            activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
            IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
            ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
            GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
            ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
        Length = 744

 Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
 Identities = 174/372 (46%), Positives = 247/372 (66%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             E+ +L  V DA VPV+KFKF G+ IDLL+ARL+L  IP++LD+  DS+L+N D + +RSL
Sbjct:   143 EIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSL 202

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP  +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   203 NGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYP 262

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NAV + LV +FF V+++W WPNPVLL   E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   263 NAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYP 322

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVSTST  IM +EF+ G  + + + + +AD  W  LFEP  FF+ Y++Y+ +  
Sbjct:   323 QQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKAD--WSKLFEPPNFFQQYRHYIVLTA 380

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFM 302
             SA   ++   W G VES++R L   +ER+ Y  +   +P   PG   ++++  + S +F+
Sbjct:   381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFI 440

Query:   303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVF 358
             G+  K+ +   +    D+   ++ F   V    S   + K GM I   HV ++ L +++ 
Sbjct:   441 GISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLP 499

Query:   359 PGGVRPSRPSKG 370
             P  V+  + S G
Sbjct:   500 PELVQRKKKSLG 511


>UNIPROTKB|Q9BWT3 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
            GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
            EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
            EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
            IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
            ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
            PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
            Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
            CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
            neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
            OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
            ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
            Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
        Length = 736

 Score = 827 (296.2 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
 Identities = 164/378 (43%), Positives = 241/378 (63%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:   142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRA 377
               +   +  +   D  R+
Sbjct:   498 AEILQKKKKQSLSDVNRS 515

 Score = 60 (26.2 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query:   446 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 502
             D N  +G   S R  ++++  DS R + N    +S   K D P +G+           NS
Sbjct:   511 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 562

Query:   503 KDAEKLAIEKIMSGPYVADQAFP 525
              +   + +EK +S P     + P
Sbjct:   563 AEPAAVIVEKPLSVPPAQGLSIP 585


>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
            symbol:papola "poly(A) polymerase alpha"
            species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
            activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
            [GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
            processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
            HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
            RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
            Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
            NextBio:20817515 Uniprot:Q5SNY2
        Length = 723

 Score = 830 (297.2 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
 Identities = 174/386 (45%), Positives = 247/386 (63%)

Query:     2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
             L E  EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPE+LD+  D +L+N D +
Sbjct:   136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195

Query:    62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
              +RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR 
Sbjct:   196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255

Query:   122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
             CQLYPNAV + LV +FF V+++W WPNPVLL   E+ +L L VWDPR  P D+YHLMPII
Sbjct:   256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315

Query:   182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
             TPAYP  NS+YNVS ST  IM++EF+RG  I + + +N+AD  W  LFE   FF+ YK+Y
Sbjct:   316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAD--WSKLFEAPNFFQKYKHY 373

Query:   242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
             + +  SA+       W G VES++R L   +E++ +  L     Q  P P + +DK +  
Sbjct:   374 IVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-F 432

Query:   297 YCSYFMGL--QRKQGVP-VGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 352
                + +G+  ++ +G   +     FDI+  T   ++QA++     +  M+I+  HV R+ 
Sbjct:   433 STMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQD-MKITAMHVKRKQ 491

Query:   353 LPNFVFPGGVRPSRPSKGTWDSRRAL 378
             L   +    +  S+  K + D  RA+
Sbjct:   492 LHQLLPEVAIHRSK-RKHSSDGVRAM 516

 Score = 43 (20.2 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query:   463 TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK-DAEKLAIEK 512
             T  ++G   +   ++H   VDG    +   KG +   S S   +EK   E+
Sbjct:   560 TSELQGKTEATGENTHLASVDGTSSSNASGKGAAPPQSTSPIQSEKKPSEQ 610


>RGD|1310337 [details] [associations]
            symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
            norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
            RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
            GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
            Uniprot:D3ZAN6
        Length = 739

 Score = 826 (295.8 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
 Identities = 172/398 (43%), Positives = 248/398 (62%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             V  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:   142 VRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRA---LERKVSSHTKPGADDGR 394
               +   +  K   D  R+   L+ K SS      D  R
Sbjct:   498 AEILQKK-KKSLSDVSRSSGGLQSKRSSLDSNCLDSSR 534

 Score = 39 (18.8 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query:   356 FVFPGGV-RPSRPSKGTWDSRRA 377
             F  PG   +PS P   T D+ R+
Sbjct:   542 FNSPGSAHKPSNPDSPTGDAERS 564


>UNIPROTKB|A5D7N5 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
            EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
            RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
            Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
            InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
        Length = 740

 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 173/419 (41%), Positives = 256/419 (61%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I E+LD+  DS L++ D + +RSLN
Sbjct:   142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
               +   +  +   D  R+     S  +   ++     + TD+  +T   N+   A  PS
Sbjct:   498 AEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDN--ETPF-NSPVSANKPS 553


>UNIPROTKB|F1SQL7 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
            RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
            GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
        Length = 741

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 171/419 (40%), Positives = 254/419 (60%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:   142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
               +   +  +   D  R+     S  +   ++     + TD+       N+   A  PS
Sbjct:   498 AEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNGTPF---NSPVSANKPS 553


>MGI|MGI:2442119 [details] [associations]
            symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
            evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
            EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
            IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
            ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
            PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
            KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
            Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
            GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
        Length = 739

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 177/423 (41%), Positives = 256/423 (60%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:   142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRA---LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 416
               +   +  K   D  R+   L+ K SS      D  R    TD        N+   A  
Sbjct:   498 AEILQKK-KKSLSDVSRSSGGLQSKRSSLDSTCLDSSR---DTDSGTPF---NSPVSANK 550

Query:   417 PSS 419
             PS+
Sbjct:   551 PSN 553


>MGI|MGI:1932115 [details] [associations]
            symbol:Papolb "poly (A) polymerase beta (testis specific)"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
            reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
            II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
            EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
            UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
            MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
            PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
            NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
            Uniprot:Q9WVP6
        Length = 641

 Score = 802 (287.4 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
 Identities = 168/364 (46%), Positives = 235/364 (64%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I +FR TLR ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I   +  N+A+  W  LFE  +FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
             SA        W G VES++R L   +E++ +  L     Q  P P + +DK +     + 
Sbjct:   380 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWV 438

Query:   302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL---- 353
             +GL  K+      +     +DI+  T   ++QA++   + +  M+I+  H+ R+ L    
Sbjct:   439 IGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLL 497

Query:   354 PNFV 357
             PN V
Sbjct:   498 PNHV 501

 Score = 43 (20.2 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query:   459 ENNLTDSIRGSRNSVEVSSHNGKVD-GPMIGDPRNK 493
             +++L  SI  S NS+   S  G +  GP+ G+P+ +
Sbjct:   520 DSSLLLSI-DSENSMTAPSPTGTMKTGPLTGNPQGR 554


>FB|FBgn0015949 [details] [associations]
            symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
            evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
            SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
            FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
            ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
        Length = 659

 Score = 780 (279.6 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
 Identities = 146/292 (50%), Positives = 203/292 (69%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L + PEVTE   V +A VPV+K  F G+ IDLL+ARLSL  IP+D D+  D++L+N D 
Sbjct:   144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRVTD+IL LVP I+NFR  LR ++ WAK+ G+YSN  G+ GG+ WA+LVAR
Sbjct:   204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
              CQLYPNA  + LV +FF V+++W+WPNPVLL   +  +L  QVWDPR N  D+YHLMPI
Sbjct:   264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYP  NS++NVS ST ++++ EF RG  I + +      + W+ LFE  +FF  Y++
Sbjct:   324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGR--IPWERLFEAPSFFYRYRH 381

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
             ++ + ++++ ADD   W G VES++R L   +ER+ +  L  H +P  F  K
Sbjct:   382 FIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNPKCFEFK 432

 Score = 62 (26.9 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
 Identities = 22/81 (27%), Positives = 40/81 (49%)

Query:   293 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAH 347
             S P +CS +F+GL+ ++     E    D+  +++ F + V M+ +     K GM I   H
Sbjct:   462 SAP-FCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516

Query:   348 VTRRNLPNFVFPGGVRPSRPS 368
             V R+ L  ++    ++  R S
Sbjct:   517 VKRKQLSLYLDSDFLKRERKS 537


>UNIPROTKB|J9NS30 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
            Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
        Length = 813

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 163/378 (43%), Positives = 241/378 (63%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:   142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVT++IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   202 GCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261

Query:   128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
             A  S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP 
Sbjct:   262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321

Query:   188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
              NS+YNVSTST  +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  S
Sbjct:   322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTAS 379

Query:   248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
             A   ++   W G VES++R L   +ER+ +  +   +P   PG+        Y S +F+G
Sbjct:   380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLG 439

Query:   304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
             +  ++ V   E    D+   ++ F   V    +   + K GM+I   HV ++ L +++ P
Sbjct:   440 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-P 497

Query:   360 GGVRPSRPSKGTWDSRRA 377
               +   +  +   D  R+
Sbjct:   498 AEILQKKKKQSLSDVSRS 515


>UNIPROTKB|I3LRR6 [details] [associations]
            symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
            Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
        Length = 636

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 172/372 (46%), Positives = 239/372 (64%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   156 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 215

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   216 NGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 275

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   276 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 335

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I   +  ++A+  W  LFE  +FF+ YK+Y+ +  
Sbjct:   336 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHYIALLA 393

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
             SA        W G VES++R L   +E++ +  L     Q  P P +  DK +     + 
Sbjct:   394 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-FRTMWV 452

Query:   302 MGL--QRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL---- 353
             +GL  +R +   +   +  +DI+  T   ++QAV+   + +  M+I+  H+ R+ L    
Sbjct:   453 IGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNS-KMFEMDMKIAAMHLRRKELHQLL 511

Query:   354 PNFVFPGGVRPS 365
             PN V P    PS
Sbjct:   512 PNHVLPQKKTPS 523


>UNIPROTKB|F1NDP1 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
            ArrayExpress:F1NDP1 Uniprot:F1NDP1
        Length = 620

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 171/369 (46%), Positives = 231/369 (62%)

Query:     2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
             L +  EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D +
Sbjct:    18 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 77

Query:    62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
              +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR 
Sbjct:    78 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 137

Query:   122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
             CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPII
Sbjct:   138 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 197

Query:   182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
             TPAYP  NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y
Sbjct:   198 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHY 255

Query:   242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY 300
             + +  SA        W G VES++R L   +E++ +  L  H +P  F + K  P    Y
Sbjct:   256 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEY 314

Query:   301 ----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 352
                  +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ 
Sbjct:   315 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQ 373

Query:   353 L----PNFV 357
             L    PN V
Sbjct:   374 LHQLLPNHV 382


>UNIPROTKB|F1NKG9 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
            evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
            GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
            IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
            Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
            NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
        Length = 737

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 171/369 (46%), Positives = 231/369 (62%)

Query:     2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
             L +  EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D +
Sbjct:   136 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 195

Query:    62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
              +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR 
Sbjct:   196 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255

Query:   122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
             CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPII
Sbjct:   256 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 315

Query:   182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
             TPAYP  NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y
Sbjct:   316 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHY 373

Query:   242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY 300
             + +  SA        W G VES++R L   +E++ +  L  H +P  F + K  P    Y
Sbjct:   374 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEY 432

Query:   301 ----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 352
                  +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ 
Sbjct:   433 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQ 491

Query:   353 L----PNFV 357
             L    PN V
Sbjct:   492 LHQLLPNHV 500


>MGI|MGI:109301 [details] [associations]
            symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
            RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
            EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
            IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
            UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
            STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
            DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
            Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
            UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
            Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
            GermOnline:ENSMUSG00000021111 Uniprot:Q61183
        Length = 739

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 170/374 (45%), Positives = 231/374 (61%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L   +
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL 497

Query:   358 FPGGVRPSRPSKGT 371
              P  V   R    T
Sbjct:   498 -PSHVLQKRKKHST 510


>UNIPROTKB|G3MYA2 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
            Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
        Length = 718

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/374 (45%), Positives = 231/374 (61%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L   +
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   358 FPGGVRPSRPSKGT 371
              P  V   +    T
Sbjct:   498 -PSHVLQKKKKHST 510


>UNIPROTKB|P25500 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
            "magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
            binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
            evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
            activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
            GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
            EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
            PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
            PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
            ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
            Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
            EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
            Uniprot:P25500
        Length = 739

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/374 (45%), Positives = 231/374 (61%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L   +
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   358 FPGGVRPSRPSKGT 371
              P  V   +    T
Sbjct:   498 -PSHVLQKKKKHST 510


>UNIPROTKB|Q3T0A2 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
            EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
            Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
        Length = 693

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/374 (45%), Positives = 231/374 (61%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L   +
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   358 FPGGVRPSRPSKGT 371
              P  V   +    T
Sbjct:   498 -PSHVLQKKKKHST 510


>UNIPROTKB|F1PDS0 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
            "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
            EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
            Uniprot:F1PDS0
        Length = 745

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/364 (46%), Positives = 229/364 (62%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   148 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 207

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   208 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 267

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   268 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 327

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   328 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 385

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   386 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 444

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL---- 353
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L    
Sbjct:   445 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 503

Query:   354 PNFV 357
             PN V
Sbjct:   504 PNHV 507


>UNIPROTKB|G3XAH6 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
            ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
        Length = 724

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/364 (46%), Positives = 229/364 (62%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL---- 353
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L    
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   354 PNFV 357
             PN V
Sbjct:   498 PNHV 501


>UNIPROTKB|P51003 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
            polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
            evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
            [GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=ISS] [GO:0030145 "manganese ion binding"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
            evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
            Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
            GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
            Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
            EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
            EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
            RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
            UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
            DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
            PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
            PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
            Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
            UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
            MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
            OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
            NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
            Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
        Length = 745

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/364 (46%), Positives = 229/364 (62%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL---- 353
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L    
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   354 PNFV 357
             PN V
Sbjct:   498 PNHV 501


>UNIPROTKB|Q9NRJ5 [details] [associations]
            symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
            "cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
            EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
            RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
            SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
            PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
            GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
            HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
            InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
            NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
            Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
        Length = 636

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 174/387 (44%), Positives = 245/387 (63%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NAV S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I   +  ++A+  W  LFE  +FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYF---- 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P    +     
Sbjct:   380 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 438

Query:   302 --MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
               +GL++     +   +  +DI+  T   ++QAV+   + + GM+I+  H+ R+ L   +
Sbjct:   439 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNS-KMFEMGMKITAMHLRRKELHQLL 497

Query:   358 FPGGVRPSRPSKGTWDSRRALERKVSS 384
              P  V   + +  T + RR  +   SS
Sbjct:   498 -PHHVLQDKKAHST-EGRRLTDLNDSS 522


>UNIPROTKB|F1SAQ7 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:CT827800
            Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
        Length = 693

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/364 (46%), Positives = 229/364 (62%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 379

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 438

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL---- 353
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L    
Sbjct:   439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497

Query:   354 PNFV 357
             PN V
Sbjct:   498 PNHV 501


>UNIPROTKB|I3L6F0 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
            Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
        Length = 734

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 169/364 (46%), Positives = 229/364 (62%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   158 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 217

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   218 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 277

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   278 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 337

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF+ YK+Y+ +  
Sbjct:   338 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLA 395

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
             SA        W G VES++R L   +E++ +  L  H +P  F + K  P        + 
Sbjct:   396 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWV 454

Query:   302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNL---- 353
             +GL  K+     E    D+   ++ F   V    +        M+I+  HV R+ L    
Sbjct:   455 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 513

Query:   354 PNFV 357
             PN V
Sbjct:   514 PNHV 517


>RGD|1310946 [details] [associations]
            symbol:Papolb "poly (A) polymerase beta (testis specific)"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
            "endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
            EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
            UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
            UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
            Uniprot:Q6AYH1
        Length = 642

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 168/364 (46%), Positives = 234/364 (64%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I +FR TLR ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   203 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct:   263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322

Query:   187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
               NS+YNVS ST  +M++EF++G  I   +  N+A+  W  LFE  +FF+ YK+Y+ +  
Sbjct:   323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLA 380

Query:   247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
             SA        W G VES++R L   +E++ +  L     Q  P P +  DK +     + 
Sbjct:   381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWV 439

Query:   302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL---- 353
             +GL  K+      +     +DI+  T   ++QA++   + +  M+I+  H+ R+ L    
Sbjct:   440 IGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLL 498

Query:   354 PNFV 357
             PN V
Sbjct:   499 PNHV 502


>UNIPROTKB|F1NL95 [details] [associations]
            symbol:F1NL95 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
            "chloramphenicol O-acetyltransferase activity" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR001707
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
            Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
        Length = 748

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 151/334 (45%), Positives = 221/334 (66%)

Query:     2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
             L    E+  L  V DA+VPV+KF+F G+ IDL++ARL +  + ++LD+  DS L++ D +
Sbjct:   136 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIR 195

Query:    62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
              +RSLNGCRVTD+IL LVP  +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR 
Sbjct:   196 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 255

Query:   122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
             CQL+PNA+ S LV +FF ++++W WPNPVLL   EE +L L VWDPR NP D+YH+MPII
Sbjct:   256 CQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 315

Query:   182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
             TPAYP  NS+YNVSTST  ++++E + G  +   + +  +D  W  LFE   FF+ YK+Y
Sbjct:   316 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHY 373

Query:   242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
             + +  S    +    W G VES++R L   +ER+ + N+   +P   PG+     +  Y 
Sbjct:   374 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYV 433

Query:   299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
             S +F+G+  ++ +   E  + D+   ++ F  AV
Sbjct:   434 SMWFLGIIFRK-LESAESTKIDLTYDIQSFTDAV 466


>UNIPROTKB|F1P3A1 [details] [associations]
            symbol:F1P3A1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
            O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR001707
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
            Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
        Length = 738

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 151/334 (45%), Positives = 221/334 (66%)

Query:     2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
             L    E+  L  V DA+VPV+KF+F G+ IDL++ARL +  + ++LD+  DS L++ D +
Sbjct:   136 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIR 195

Query:    62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
              +RSLNGCRVTD+IL LVP  +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR 
Sbjct:   196 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 255

Query:   122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
             CQL+PNA+ S LV +FF ++++W WPNPVLL   EE +L L VWDPR NP D+YH+MPII
Sbjct:   256 CQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 315

Query:   182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
             TPAYP  NS+YNVSTST  ++++E + G  +   + +  +D  W  LFE   FF+ YK+Y
Sbjct:   316 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSD--WPKLFEQPNFFQKYKHY 373

Query:   242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
             + +  S    +    W G VES++R L   +ER+ + N+   +P   PG+     +  Y 
Sbjct:   374 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYV 433

Query:   299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
             S +F+G+  ++ +   E  + D+   ++ F  AV
Sbjct:   434 SMWFLGIIFRK-LESAESTKIDLTYDIQSFTDAV 466


>WB|WBGene00011791 [details] [associations]
            symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
            STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
            KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
            InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
        Length = 554

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 165/414 (39%), Positives = 244/414 (58%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L + PEVTEL  V  A VP+M  K+SGV ID+L+ARL+L  +PEDL+I  DS+L+N DE
Sbjct:   129 ILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDE 188

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRV +Q+L+LVP  +NF  TLR ++ WAK  G+YSN  GF GGI WA+LVAR
Sbjct:   189 ESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 248

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKY 175
             ICQLYPNA PS L+ + F +++ W WP PVLL    C   +   L   VWDPRRN  D+Y
Sbjct:   249 ICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRY 308

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             HLMPIITPA+P  NS++NVS S+++++ DE ++   IC+ +  +E  ++W  L E   FF
Sbjct:   309 HLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFF 366

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSK 294
               Y +++ + + AE+  +   + G+ ESR+RQL   +E++   ++Q    +P  F D   
Sbjct:   367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKD 424

Query:   295 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHV 348
             P    +F+GL+    V     +  D+   +++FK  +   ++       G Q+     + 
Sbjct:   425 PKKSIWFIGLEFVANV-----KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYE 479

Query:   349 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 400
              R NL N +    +   R  K T  S    +  R +  H    A   +K+ + D
Sbjct:   480 KRSNLINIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533


>UNIPROTKB|Q09995 [details] [associations]
            symbol:T15H9.6 "Protein T15H9.6" species:6239
            "Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
            STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
            KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
            InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
        Length = 554

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 165/414 (39%), Positives = 244/414 (58%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L + PEVTEL  V  A VP+M  K+SGV ID+L+ARL+L  +PEDL+I  DS+L+N DE
Sbjct:   129 ILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDE 188

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRV +Q+L+LVP  +NF  TLR ++ WAK  G+YSN  GF GGI WA+LVAR
Sbjct:   189 ESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 248

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL----C-AIEEGSLGLQVWDPRRNPKDKY 175
             ICQLYPNA PS L+ + F +++ W WP PVLL    C   +   L   VWDPRRN  D+Y
Sbjct:   249 ICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRY 308

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             HLMPIITPA+P  NS++NVS S+++++ DE ++   IC+ +  +E  ++W  L E   FF
Sbjct:   309 HLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFF 366

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSK 294
               Y +++ + + AE+  +   + G+ ESR+RQL   +E++   ++Q    +P  F D   
Sbjct:   367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKN--QVIQVAQINPRKFKDVKD 424

Query:   295 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHV 348
             P    +F+GL+    V     +  D+   +++FK  +   ++       G Q+     + 
Sbjct:   425 PKKSIWFIGLEFVANV-----KNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYE 479

Query:   349 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALE--RKVSSHTKPGADDGRKRKQTD 400
              R NL N +    +   R  K T  S    +  R +  H    A   +K+ + D
Sbjct:   480 KRSNLINIISKKDLSCQRIMKKTEVSVPVTKDSRNLKRHILDEAPTVQKKHKLD 533


>WB|WBGene00009658 [details] [associations]
            symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
            PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
            EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
            CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
        Length = 554

 Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
 Identities = 164/425 (38%), Positives = 253/425 (59%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML + PEVT L  V +A VP+M  K+SG+ ID L+ARL+L  +PEDLDI  D++L+N D+
Sbjct:   134 MLAKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQ 193

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRV + +L+LVP  +NF  TLR ++ WAK  G+YSN  GF GGI WA+LVAR
Sbjct:   194 ESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 253

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKY 175
              CQLYPNA PS L+ + F +++ W+WP PVLL  I    + L      VWDPRRN  D+Y
Sbjct:   254 ACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRY 313

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             HLMPI+TPA+P  NS++NVS S+++++ +E +     C+ ++    +  W  L E   FF
Sbjct:   314 HLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCN--WMDLLEEINFF 371

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
               YK+++ + ++AE   D   + G+ ESR+RQL L +E++    L  H +P  F     P
Sbjct:   372 SRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP 430

Query:   296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK-----QAVSMYTLRKP-GMQISVAHVT 349
                 +F+GLQ  + V     +  D+   +++FK     QA S+  +     ++   ++V 
Sbjct:   431 KKSVWFIGLQFDENV-----KNLDLTKDIQQFKRNIDYQAKSVKDIEANCAVETDFSYVK 485

Query:   350 RRNLPNFVFPGGVRPSRPSKGTWDSRRAL--ERKVSSHTKPGADDGRKRKQTD-DNVDTH 406
             R +L   +    ++  +  K   +S+  +  +RKVS +  P     +K   ++  +V++ 
Sbjct:   486 RSDLAQTISVKDLKQGKMYKKP-ESKDPVSKKRKVSENA-PSVPKKQKLDVSEKSSVESL 543

Query:   407 LRNAK 411
             L+N K
Sbjct:   544 LKNLK 548


>POMBASE|SPBC646.04 [details] [associations]
            symbol:pla1 "poly(A) polymerase Pla1" species:4896
            "Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005847 "mRNA cleavage and polyadenylation specificity factor
            complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
            evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
            GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
            GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
            EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
            ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
            STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
            KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
            Uniprot:Q10295
        Length = 566

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 137/273 (50%), Positives = 194/273 (71%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML E  EVT+L  VPDA+VP++KFKF G+SIDL++ARLS+  +P DL++S +++L+  +E
Sbjct:   122 MLREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEE 181

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             + V SLNG RVTDQIL+LVP    F+  LR ++FWA+RR +Y+NV GF GG+ WA++VAR
Sbjct:   182 RCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVAR 241

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             ICQLYPNAV S++V++FFR+  QW WP P+LL  IE+G L +++W+P+  P DK H MPI
Sbjct:   242 ICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPI 301

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYP M +++N++ ST  I++ E  R  EI + +      + W  LF+   FF  YK+
Sbjct:   302 ITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKH 359

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
             YL I  +A+ A+    W G VES+LR L  ++E
Sbjct:   360 YLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392


>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
            symbol:PFF1240w "poly(A) polymerase PAP,
            putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
            polyadenylation" evidence=ISS] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
            ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
            EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
            EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
        Length = 631

 Score = 566 (204.3 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 110/215 (51%), Positives = 144/215 (66%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSL 66
             V +L  +P+ + P+++F +  V IDLL A L    + +    +  D IL+N DE TVRSL
Sbjct:   205 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSL 264

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NG RV D IL  VP    FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYP
Sbjct:   265 NGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYP 324

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIIT 182
             N   S L+ +FF+VY+ W W  PVLL  I+    EG     VWDP +N KDK H+MPIIT
Sbjct:   325 NFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIIT 384

Query:   183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 217
             PA+PCMNS++NV+  T  I+++EF+R H I + ME
Sbjct:   385 PAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419

 Score = 175 (66.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 53/196 (27%), Positives = 92/196 (46%)

Query:   219 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 278
             N ++  W T+ EP   F  YK++L I I   N     +WKGW+ES++R L  K+E  T N
Sbjct:   444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501

Query:   279 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 335
              L+  P P   F  K K  YCS +F+ L      P      F++   +++F      +  
Sbjct:   502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559

Query:   336 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 393
              ++ P   +I++ +  R  +  F+       ++ +K   ++    ++  ++H + G  + 
Sbjct:   560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616

Query:   394 RKRKQTDDNVDTHLRN 409
              K KQ D+  D HL N
Sbjct:   617 HKNKQFDE-YDDHLFN 631

 Score = 41 (19.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query:   440 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 481
             L+F  +   E    N++ +ENN  D    ++N    ++H  K
Sbjct:   580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620


>UNIPROTKB|C6KT92 [details] [associations]
            symbol:PFF1240w "Poly(A) polymerase PAP, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
            ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
            EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
            EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
        Length = 631

 Score = 566 (204.3 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 110/215 (51%), Positives = 144/215 (66%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSL 66
             V +L  +P+ + P+++F +  V IDLL A L    + +    +  D IL+N DE TVRSL
Sbjct:   205 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSL 264

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NG RV D IL  VP    FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYP
Sbjct:   265 NGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYP 324

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIIT 182
             N   S L+ +FF+VY+ W W  PVLL  I+    EG     VWDP +N KDK H+MPIIT
Sbjct:   325 NFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIIT 384

Query:   183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 217
             PA+PCMNS++NV+  T  I+++EF+R H I + ME
Sbjct:   385 PAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419

 Score = 175 (66.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
 Identities = 53/196 (27%), Positives = 92/196 (46%)

Query:   219 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 278
             N ++  W T+ EP   F  YK++L I I   N     +WKGW+ES++R L  K+E  T N
Sbjct:   444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501

Query:   279 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 335
              L+  P P   F  K K  YCS +F+ L      P      F++   +++F      +  
Sbjct:   502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559

Query:   336 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 393
              ++ P   +I++ +  R  +  F+       ++ +K   ++    ++  ++H + G  + 
Sbjct:   560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616

Query:   394 RKRKQTDDNVDTHLRN 409
              K KQ D+  D HL N
Sbjct:   617 HKNKQFDE-YDDHLFN 631

 Score = 41 (19.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query:   440 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 481
             L+F  +   E    N++ +ENN  D    ++N    ++H  K
Sbjct:   580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620


>CGD|CAL0002451 [details] [associations]
            symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
            cleavage and polyadenylation specificity factor complex"
            evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
            GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
            KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
            ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
            KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 Uniprot:Q9UW26
        Length = 555

 Score = 701 (251.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 135/293 (46%), Positives = 198/293 (67%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L    E+ E+ PVPDA VP++K +F+G+SIDL++ARL +  +P DL +   ++L+N DE
Sbjct:   122 LLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDE 181

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             + +R+LNG RVTD+IL+LVPK   F+  LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct:   182 KDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVAR 241

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             ICQLYPNAV +++V +FF +Y+QW WP PVLL  IE+G L ++VW+PR    D+ H MP+
Sbjct:   242 ICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPV 301

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYP M +++N+++ST ++++ EFQRG E+   +  N     W  L E   FF  YK 
Sbjct:   302 ITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKF 359

Query:   241 YLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
             YL I  +  +  A+ L+ + G VES+LR L  K+E     +   HP+   F +
Sbjct:   360 YLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410

 Score = 37 (18.1 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query:   484 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 519
             G   GD R KG+  + N+ N+K+  +  +E  M+  ++
Sbjct:   428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465


>UNIPROTKB|Q9UW26 [details] [associations]
            symbol:PAPA "Poly(A) polymerase PAPa" species:237561
            "Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
            GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
            RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
            GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
        Length = 555

 Score = 701 (251.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 135/293 (46%), Positives = 198/293 (67%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L    E+ E+ PVPDA VP++K +F+G+SIDL++ARL +  +P DL +   ++L+N DE
Sbjct:   122 LLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDE 181

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             + +R+LNG RVTD+IL+LVPK   F+  LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct:   182 KDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVAR 241

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             ICQLYPNAV +++V +FF +Y+QW WP PVLL  IE+G L ++VW+PR    D+ H MP+
Sbjct:   242 ICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPV 301

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYP M +++N+++ST ++++ EFQRG E+   +  N     W  L E   FF  YK 
Sbjct:   302 ITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKF 359

Query:   241 YLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
             YL I  +  +  A+ L+ + G VES+LR L  K+E     +   HP+   F +
Sbjct:   360 YLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410

 Score = 37 (18.1 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query:   484 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 519
             G   GD R KG+  + N+ N+K+  +  +E  M+  ++
Sbjct:   428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465


>WB|WBGene00012528 [details] [associations]
            symbol:pap-1 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
            "body morphogenesis" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0040027
            "negative regulation of vulval development" evidence=IMP]
            [GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
            GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
            GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
            ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
            EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
            KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
            InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
        Length = 655

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 153/386 (39%), Positives = 233/386 (60%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML   P VTELH V +A VPVMK K+SGV +D+L+ARL+L  +P+  ++S D++L+N D+
Sbjct:   127 MLNNDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQ 186

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRV +Q+L+LVP+ + F  TLR ++ WAK  G+YSN  GF GGI WA+LVAR
Sbjct:   187 ESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 246

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
              CQLYPNA PS LV R F +++ W WP+PV+L  +        +L   VWDPRR   D++
Sbjct:   247 ACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRF 306

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             H+MPIITPA+P  NS++NV+ ST  ++ +E     EIC  + + ++   W  LFE   FF
Sbjct:   307 HVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFF 364

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG-- 287
               YK+++ + ++A N ++  N+ G++ESR+R L   +ER+      +N    H P P   
Sbjct:   365 SRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAK 424

Query:   288 -DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM----- 341
              D + ++K +   +F+GL+  +       +  D+   ++ FK  V +      G+     
Sbjct:   425 FDVNPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQ 478

Query:   342 -QISVAHVTRRNLPNFVFPGGVRPSR 366
              QI + +V R +L   +    +R  R
Sbjct:   479 VQIDMFYVKRNSLIQVISAADLRRGR 504


>UNIPROTKB|Q9U2P3 [details] [associations]
            symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
            elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
            GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
            GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
            GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
            ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
            EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
            KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
            InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
        Length = 655

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 153/386 (39%), Positives = 233/386 (60%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML   P VTELH V +A VPVMK K+SGV +D+L+ARL+L  +P+  ++S D++L+N D+
Sbjct:   127 MLNNDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQ 186

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             ++VRSLNGCRV +Q+L+LVP+ + F  TLR ++ WAK  G+YSN  GF GGI WA+LVAR
Sbjct:   187 ESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 246

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
              CQLYPNA PS LV R F +++ W WP+PV+L  +        +L   VWDPRR   D++
Sbjct:   247 ACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRF 306

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             H+MPIITPA+P  NS++NV+ ST  ++ +E     EIC  + + ++   W  LFE   FF
Sbjct:   307 HVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSK--WTALFEEVNFF 364

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-----TYNMLQCH-PHPG-- 287
               YK+++ + ++A N ++  N+ G++ESR+R L   +ER+      +N    H P P   
Sbjct:   365 SRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIIIAHNDPNKHKPSPNAK 424

Query:   288 -DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM----- 341
              D + ++K +   +F+GL+  +       +  D+   ++ FK  V +      G+     
Sbjct:   425 FDVNPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQ 478

Query:   342 -QISVAHVTRRNLPNFVFPGGVRPSR 366
              QI + +V R +L   +    +R  R
Sbjct:   479 VQIDMFYVKRNSLIQVISAADLRRGR 504


>SGD|S000001710 [details] [associations]
            symbol:PAP1 "Poly(A) polymerase, one of three factors
            required for mRNA 3'-end pol" species:4932 "Saccharomyces
            cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
            polyadenylation specificity factor complex" evidence=IDA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
            evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
            evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
            GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
            GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
            RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
            PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
            KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
            PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
            PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
            DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
            PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
            EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
            GermOnline:YKR002W Uniprot:P29468
        Length = 568

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 145/335 (43%), Positives = 209/335 (62%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             +L E  E+ E+ PVPDA VP++K KFSG+SIDL+ ARL    +P  L +S  ++L+N DE
Sbjct:   123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
             + +R+LNG RVTD+IL LVPK   FR  LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct:   183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             ICQLYPNA  +++++RFF + ++W WP PV+L  IE+G L ++VW+P+   +D+ H MP+
Sbjct:   243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
             ITPAYP M +++N++ ST ++++ EF RG +I   +  N+    W  LFE   FF  YK 
Sbjct:   303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKS--WANLFEKNDFFFRYKF 360

Query:   241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC 298
             YL I      +D+    W G VES++R L +K+E     +   HP    F S    P   
Sbjct:   361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLA-GIKIAHPFTKPFESSYCCPTED 419

Query:   299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 333
              Y M +Q K G    E     ++L   E K+  S+
Sbjct:   420 DYEM-IQDKYGSHKTETALNALKLVTDENKEEESI 453


>RGD|1308673 [details] [associations]
            symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
            norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
            [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
            evidence=IBA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
            GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
            Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
            Uniprot:F1MAC5
        Length = 681

 Score = 548 (198.0 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 99/162 (61%), Positives = 125/162 (77%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR
Sbjct:   262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303

 Score = 76 (31.8 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 36/157 (22%), Positives = 63/157 (40%)

Query:   225 WDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 283
             WD       FF    + +++ +++   +  R  W G VES++R L   +E++ +  L  H
Sbjct:   300 WDPRVSVL-FFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 357

Query:   284 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 338
              +P  F + K  P        + +GL  K+     E    D+   ++ F   V    +  
Sbjct:   358 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 416

Query:   339 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 371
                   M+I+  HV R+ L   + P  V   R    T
Sbjct:   417 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 452


>UNIPROTKB|H0YJ00 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
            EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            Ensembl:ENST00000553461 Uniprot:H0YJ00
        Length = 203

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 99/162 (61%), Positives = 125/162 (77%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:    28 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 87

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:    88 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 147

Query:   127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
             NA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR
Sbjct:   148 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 189


>UNIPROTKB|D4A764 [details] [associations]
            symbol:Papola "Protein Papola" species:10116 "Rattus
            norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
            SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
            ArrayExpress:D4A764 Uniprot:D4A764
        Length = 657

 Score = 464 (168.4 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 83/138 (60%), Positives = 108/138 (78%)

Query:     7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
             EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSL
Sbjct:   142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201

Query:    67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
             NGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct:   202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261

Query:   127 NAVPSMLVSRFFRVYTQW 144
             NA+ S LV +FF V+++W
Sbjct:   262 NAIASTLVHKFFLVFSKW 279

 Score = 75 (31.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 36/157 (22%), Positives = 63/157 (40%)

Query:   228 LFEPFTFFEAYKNYL---RIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 283
             +F  +  F  Y N +    + +++   +  R  W G VES++R L   +E++ +  L  H
Sbjct:   275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 333

Query:   284 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 338
              +P  F + K  P        + +GL  K+     E    D+   ++ F   V    +  
Sbjct:   334 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 392

Query:   339 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 371
                   M+I+  HV R+ L   + P  V   R    T
Sbjct:   393 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 428


>TAIR|locus:2084274 [details] [associations]
            symbol:PAPS3 "poly(A) polymerase 3" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
            UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
            STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
            KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
            InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
            ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
        Length = 507

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 115/306 (37%), Positives = 173/306 (56%)

Query:     1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
             ML    EV+ELH V DA VP+++FKF G+ +DL YA+L +  IP ++D+     L++ DE
Sbjct:   116 MLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDE 175

Query:    61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
              + + L+G R    IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A 
Sbjct:   176 TSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF 235

Query:   121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
             +C   PNA  S L++ FF  +  W+WP PV+L      S G         P     LMPI
Sbjct:   236 VCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTGA--------PPG---LMPI 284

Query:   181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
               P       +  ++ ST   ++ EF  GH + +   K   +  W  LFE + +   Y  
Sbjct:   285 QLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTW 342

Query:   241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCS 299
             + +I +SA N +DL +W GWV+SR R L +KIE   Y +  C P+P ++ +  +K     
Sbjct:   343 FTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIV 399

Query:   300 YFMGLQ 305
             ++ GLQ
Sbjct:   400 FYWGLQ 405


>UNIPROTKB|G3V2A0 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
            ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
        Length = 475

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 104/255 (40%), Positives = 145/255 (56%)

Query:   116 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 175
             +LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+Y
Sbjct:     1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60

Query:   176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
             HLMPIITPAYP  NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF
Sbjct:    61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFF 118

Query:   236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSK 294
             + YK+Y+ +  SA        W G VES++R L   +E++ +  L  H +P  F + K  
Sbjct:   119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKEN 177

Query:   295 P----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVA 346
             P        + +GL  K+     E    D+   ++ F   V    +        M+I+  
Sbjct:   178 PDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236

Query:   347 HVTRRNL----PNFV 357
             HV R+ L    PN V
Sbjct:   237 HVKRKQLHQLLPNHV 251


>UNIPROTKB|F8WAT4 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
            GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
            EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
            Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
            Uniprot:F8WAT4
        Length = 234

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 78/137 (56%), Positives = 106/137 (77%)

Query:     8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
             +  L  V DA VPV+KF+F G+ IDL++ARL++  I ++LD+  DS L++ D + +RSLN
Sbjct:    98 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 157

Query:    68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
             GCRVTD+IL LVP  + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct:   158 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 217

Query:   128 AVPSMLVSRFFRVYTQW 144
             A  S LV +FF V+++W
Sbjct:   218 AAASTLVHKFFLVFSKW 234


>UNIPROTKB|Q59G05 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma variant"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR007010
            InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
            RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
            CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
            EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
            ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
            Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
            Uniprot:Q59G05
        Length = 382

 Score = 177 (67.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
 Identities = 46/185 (24%), Positives = 92/185 (49%)

Query:   201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
             +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G 
Sbjct:     3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60

Query:   261 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 316
             VES++R L   +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E  
Sbjct:    61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119

Query:   317 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 372
               D+   ++ F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   
Sbjct:   120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178

Query:   373 DSRRA 377
             D  R+
Sbjct:   179 DVNRS 183

 Score = 60 (26.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query:   446 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 502
             D N  +G   S R  ++++  DS R + N    +S   K D P +G+           NS
Sbjct:   179 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 230

Query:   503 KDAEKLAIEKIMSGPYVADQAFP 525
              +   + +EK +S P     + P
Sbjct:   231 AEPAAVIVEKPLSVPPAQGLSIP 253


>UNIPROTKB|G4N5I8 [details] [associations]
            symbol:MGG_06121 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
            Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
            GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
            GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
            ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
            KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
        Length = 1238

 Score = 187 (70.9 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 65/281 (23%), Positives = 122/281 (43%)

Query:    21 VMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
             +++ +   V +DL Y   +     W  P  L +  +  +     QT+  L   R  D + 
Sbjct:   726 MLELEVMSVRVDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKALRDLDYLR 783

Query:    77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN------AVP 130
               +P +  FR   R ++ WA+ RG+YS   G+LGGI  ++L+AR+C+L         +VP
Sbjct:   784 ETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSVP 843

Query:   131 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 190
              +L S FF  Y  + W N +         L        R+ ++   ++    PA   +N+
Sbjct:   844 DIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL-----RSAREPLAILGFFPPA---LNT 894

Query:   191 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------------FF 235
             +   +  +++ +  E  + +E+      NE  + WDT F   +               F 
Sbjct:   895 TLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLARGAADFL 949

Query:   236 EAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 274
              +YK++++I++     +      + GW+ESR   L + + R
Sbjct:   950 SSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990


>UNIPROTKB|F1PYB9 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
            Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
            GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
            Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
        Length = 384

 Score = 176 (67.0 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 46/185 (24%), Positives = 92/185 (49%)

Query:   201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
             +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G 
Sbjct:     3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60

Query:   261 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 316
             VES++R L   +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E  
Sbjct:    61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119

Query:   317 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 372
               D+   ++ F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   
Sbjct:   120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178

Query:   373 DSRRA 377
             D  R+
Sbjct:   179 DVSRS 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      607       567   0.00079  120 3  11 22  0.39    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  50
  No. of states in DFA:  627 (67 KB)
  Total size of DFA:  342 KB (2172 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  46.34u 0.18s 46.52t   Elapsed:  00:00:02
  Total cpu time:  46.35u 0.18s 46.53t   Elapsed:  00:00:02
  Start:  Mon May 20 20:23:34 2013   End:  Mon May 20 20:23:36 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PAPS1 PAPS1 PAPS1 poly(A) polymerase 1	protein from Arabidopsis thaliana	2.3e-174
BLAST match view associations BLAST with nPAP nPAP nPAP nuclear poly(a) polymerase	protein from Arabidopsis thaliana	4.3e-141
BLAST match view associations BLAST with PAPS2 PAPS2 PAPS2 poly(A) polymerase 2	protein from Arabidopsis thaliana	6.3e-140
BLAST match view associations BLAST with papA papA papA poly(A) polymerase	gene from Dictyostelium discoideum	8.3e-90
BLAST match view associations BLAST with papolg papolg papolg poly(A) polymerase gamma	gene_product from Danio rerio	2.9e-87
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	8.1e-87
BLAST match view associations BLAST with papola papola papola poly(A) polymerase alpha	gene_product from Danio rerio	2.4e-85
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	gene from Rattus norvegicus	1.7e-84
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG PAPOLG protein	protein from Bos taurus	5.0e-83
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Sus scrofa	1.3e-82
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	protein from Mus musculus	1.7e-82
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	protein from Mus musculus	2.2e-82
BLAST match view associations BLAST with hrg hrg hrg hiiragi	protein from Drosophila melanogaster	4.5e-82
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	7.4e-82
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Uncharacterized protein	protein from Sus scrofa	2.0e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.5e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.5e-81
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	protein from Mus musculus	2.5e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Canis lupus familiaris	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Poly(A) polymerase beta	protein from Homo sapiens	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	5.2e-81
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	5.2e-81
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	gene from Rattus norvegicus	2.0e-79
BLAST match view associations BLAST with F1NL95 F1NL95 F1NL95 Uncharacterized protein	protein from Gallus gallus	3.0e-78
BLAST match view associations BLAST with F1P3A1 F1P3A1 F1P3A1 Uncharacterized protein	protein from Gallus gallus	3.0e-78
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6	gene from Caenorhabditis elegans	2.7e-75
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6 Protein T15H9.6	protein from Caenorhabditis elegans	2.7e-75
BLAST match view associations BLAST with F43G6.5 F43G6.5 F43G6.5	gene from Caenorhabditis elegans	5.7e-75
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w poly(A) polymerase PAP, putative	gene from Plasmodium falciparum	2.0e-71
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w Poly(A) polymerase PAP, putative	protein from Plasmodium falciparum 3D7	2.0e-71
BLAST match view associations BLAST with PAP1 PAP1 PAP1	gene_product from Candida albicans	4.2e-71
BLAST match view associations BLAST with PAPA PAPA PAPA Poly(A) polymerase PAPa	protein from Candida albicans SC5314	4.2e-71
BLAST match view associations BLAST with pap-1 pap-1 pap-1	gene from Caenorhabditis elegans	4.8e-71
BLAST match view associations BLAST with pap-1 pap-1 pap-1 Protein PAP-1	protein from Caenorhabditis elegans	4.8e-71
BLAST match view associations BLAST with PAP1 PAP1 PAP1 Poly(A) polymerase, one of three factors required for mRNA 3'-end pol	gene from Saccharomyces cerevisiae	8.0e-69
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	gene from Rattus norvegicus	4.2e-59
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	6.3e-53
BLAST match view associations BLAST with PAPS3 PAPS3 PAPS3 AT3G06560	protein from Arabidopsis thaliana	1.2e-49
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	7.3e-43
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	4.6e-41
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with MGG_06121 MGG_06121 MGG_06121 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.0e-10
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	2.4e-10